Amniota	ANCESTRAL SPECIES	10	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Mammalia	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Theria	ANCESTRAL SPECIES	26	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Eutheria	ANCESTRAL SPECIES	13	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT00730000111092.a.a ##34	ENSGT01050000244965.a #35
Primates	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT00730000111092.a.b ##34	ENSGT01050000244965.a #35
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT00730000111092.a.b ##34	ENSGT01050000244965.a #35
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00910000147806	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00910000147806	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00910000147806	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029.c #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029.c #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Pan	ANCESTRAL SPECIES	16	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029.c #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Chimpanzee	MODERN SPECIES	1	WNT8B (ENSPTRG00000002849) #7	SEC31B (ENSPTRG00000002850) #8	NDUFB8 (ENSPTRG00000002851) #9	HIF1AN (ENSPTRG00000002852) #10	PAX2 (ENSPTRG00000002853) #11	SLF2 (ENSPTRG00000002855) #12	SEMA4G (ENSPTRG00000052672) #13	MRPL43 (ENSPTRG00000002858) #14	TWNK (ENSPTRG00000029751) #15	LZTS2 (ENSPTRG00000042870) #16	PDZD7 (ENSPTRG00000002862) #17	SFXN3 (ENSPTRG00000002864) #18	KAZALD1 (ENSPTRG00000002865) #19	TLX1 (ENSPTRG00000002867) #20	LBX1 (ENSPTRG00000002868) #21	BTRC (ENSPTRG00000002869) #22	POLL (ENSPTRG00000002870) #23	DPCD (ENSPTRG00000002871) #24	FBXW4 (ENSPTRG00000048959) #25	FGF8 (ENSPTRG00000002874) #26	NPM3 (ENSPTRG00000002875) #27	OGA (ENSPTRG00000002876) #28	KCNIP2 (ENSPTRG00000002878) #29	ARMH3 (ENSPTRG00000002879) #30	HPS6 (ENSPTRG00000002881) #31	LDB1 (ENSPTRG00000023411) #32	PPRC1 (ENSPTRG00000002883) #33	NOLC1 (ENSPTRG00000023882) #34	ELOVL3 (ENSPTRG00000002885) #35	PITX3 (ENSPTRG00000002886) #36	GBF1 (ENSPTRG00000002887) #37
Bonobo	MODERN SPECIES	1	SCD (ENSPPAG00000029861)	WNT8B (ENSPPAG00000039871) #7	SEC31B (ENSPPAG00000035674) #8	NDUFB8 (ENSPPAG00000025513) #9	HIF1AN (ENSPPAG00000035861) #10	ENSPPAG00000004195 #11	SLF2 (ENSPPAG00000040627) #12	SEMA4G (ENSPPAG00000039460) #13	ENSPPAG00000042828 #14	TWNK (ENSPPAG00000035055) #15	LZTS2 (ENSPPAG00000003235) #16	PDZD7 (ENSPPAG00000036974) #17	SFXN3 (ENSPPAG00000029879) #18	KAZALD1 (ENSPPAG00000029890) #19	TLX1 (ENSPPAG00000040366) #20	BTRC (ENSPPAG00000034237) #22	POLL (ENSPPAG00000036999) #23	DPCD (ENSPPAG00000038194) #24	ENSPPAG00000025691 #25	FGF8 (ENSPPAG00000039985) #26	NPM3 (ENSPPAG00000040517) #27	OGA (ENSPPAG00000030424) #28	KCNIP2 (ENSPPAG00000029455) #29	ARMH3 (ENSPPAG00000040734) #30	HPS6 (ENSPPAG00000011993) #31	LDB1 (ENSPPAG00000024094) #32	PPRC1 (ENSPPAG00000032544) #33	NOLC1 (ENSPPAG00000038082) #34	ENSPPAG00000043390	ELOVL3 (ENSPPAG00000040688) #35	ENSPPAG00000008353 #36
Human	MODERN SPECIES	1	WNT8B (ENSG00000075290) #7	SEC31B (ENSG00000075826) #8	NDUFB8 (ENSG00000166136) #9	HIF1AN (ENSG00000166135) #10	PAX2 (ENSG00000075891) #11	SLF2 (ENSG00000119906) #12	MRPL43 (ENSG00000055950) #14	SEMA4G (ENSG00000095539) #13	TWNK (ENSG00000107815) #15	LZTS2 (ENSG00000107816) #16	PDZD7 (ENSG00000186862) #17	SFXN3 (ENSG00000107819) #18	KAZALD1 (ENSG00000107821) #19	TLX1 (ENSG00000107807) #20	LBX1 (ENSG00000138136) #21	BTRC (ENSG00000166167) #22	DPCD (ENSG00000166171) #24	POLL (ENSG00000166169) #23	FBXW4 (ENSG00000107829) #25	FGF8 (ENSG00000107831) #26	NPM3 (ENSG00000107833) #27	OGA (ENSG00000198408) #28	KCNIP2 (ENSG00000120049) #29	ARMH3 (ENSG00000120029) #30	HPS6 (ENSG00000166189) #31	LDB1 (ENSG00000198728) #32	PPRC1 (ENSG00000148840) #33	NOLC1 (ENSG00000166197) #34	ELOVL3 (ENSG00000119915) #35	PITX3 (ENSG00000107859) #36	GBF1 (ENSG00000107862) #37
Gorilla	MODERN SPECIES	1	WNT8B (ENSGGOG00000014634) #7	SEC31B (ENSGGOG00000014643) #8	NDUFB8 (ENSGGOG00000027239) #9	HIF1AN (ENSGGOG00000004308) #10	ENSGGOG00000014908 #11	SLF2 (ENSGGOG00000002070) #12	SEMA4G (ENSGGOG00000025153) #13	ENSGGOG00000023716 #14	TWNK (ENSGGOG00000015421) #15	LZTS2 (ENSGGOG00000015430) #16	PDZD7 (ENSGGOG00000015436) #17	SFXN3 (ENSGGOG00000015442) #18	KAZALD1 (ENSGGOG00000004516) #19	TLX1 (ENSGGOG00000005880) #20	LBX1 (ENSGGOG00000012521) #21	BTRC (ENSGGOG00000005023) #22	ENSGGOG00000038754	POLL (ENSGGOG00000005029) #23	DPCD (ENSGGOG00000005035) #24	ENSGGOG00000005039 #25	FGF8 (ENSGGOG00000015108) #26	NPM3 (ENSGGOG00000027500) #27	OGA (ENSGGOG00000002901) #28	KCNIP2 (ENSGGOG00000006534) #29	ARMH3 (ENSGGOG00000006539) #30	HPS6 (ENSGGOG00000008892) #31	LDB1 (ENSGGOG00000002151) #32	PPRC1 (ENSGGOG00000002155) #33	NOLC1 (ENSGGOG00000002158) #34	ELOVL3 (ENSGGOG00000024219) #35	PITX3 (ENSGGOG00000026128) #36
Orangutan	MODERN SPECIES	1	WNT8B (ENSPPYG00000002568) #7	SEC31B (ENSPPYG00000002569) #8	NDUFB8 (ENSPPYG00000002570) #9	HIF1AN (ENSPPYG00000002571) #10	ENSPPYG00000002572 #11	SLF2 (ENSPPYG00000002573) #12	SEMA4G (ENSPPYG00000002574) #13	ENSPPYG00000002575 #14	TWNK (ENSPPYG00000002576) #15	LZTS2 (ENSPPYG00000002577) #16	PDZD7 (ENSPPYG00000002578) #17	SFXN3 (ENSPPYG00000002579) #18	KAZALD1 (ENSPPYG00000002580) #19	TLX1 (ENSPPYG00000002581) #20	LBX1 (ENSPPYG00000002582) #21	BTRC (ENSPPYG00000002583) #22	POLL (ENSPPYG00000002584) #23	DPCD (ENSPPYG00000002585) #24	FBXW4 (ENSPPYG00000002586) #25	ENSPPYG00000002587	FGF8 (ENSPPYG00000002588) #26	NPM3 (ENSPPYG00000002589) #27	OGA (ENSPPYG00000002590) #28	KCNIP2 (ENSPPYG00000002591) #29	ARMH3 (ENSPPYG00000002592) #30	HPS6 (ENSPPYG00000030981) #31	LDB1 (ENSPPYG00000002593) #32	PPRC1 (ENSPPYG00000002594) #33	NOLC1 (ENSPPYG00000002595) #34	ELOVL3 (ENSPPYG00000002596) #35	ENSPPYG00000002597 #36
Gibbon	MODERN SPECIES	18	SEC31B (ENSNLEG00000014765) #8	ENSNLEG00000029318 ##9	HIF1AN (ENSNLEG00000014784) #10	ENSNLEG00000014786 #11	SLF2 (ENSNLEG00000014791) #12	SEMA4G (ENSNLEG00000014804) #13	ENSNLEG00000014812 #14	TWNK (ENSNLEG00000014818) #15	LZTS2 (ENSNLEG00000014822) #16	PDZD7 (ENSNLEG00000014823) #17	SFXN3 (ENSNLEG00000014831) #18	KAZALD1 (ENSNLEG00000035599) #19	TLX1 (ENSNLEG00000029481) #20	LBX1 (ENSNLEG00000014840) #21	ENSNLEG00000028284	BTRC (ENSNLEG00000014843) #22	POLL (ENSNLEG00000014861) #23	DPCD (ENSNLEG00000014878) #24	ENSNLEG00000014885 #25	FGF8 (ENSNLEG00000014890) #26	ENSNLEG00000029281 #27	OGA (ENSNLEG00000014902) #28	ENSNLEG00000014924 #29	ENSNLEG00000030076	ARMH3 (ENSNLEG00000014964) #30	HPS6 (ENSNLEG00000019112) #31	LDB1 (ENSNLEG00000014982) #32	PPRC1 (ENSNLEG00000014996) #33	NOLC1 (ENSNLEG00000015012) #34	ELOVL3 (ENSNLEG00000015039) #35	PITX3 (ENSNLEG00000015040) #36
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Black snub-nosed monkey	MODERN SPECIES	1538					SLF2 (ENSRBIG00000027825) #12	SEMA4G (ENSRBIG00000025014) #13	MRPL43 (ENSRBIG00000029374) #14	TWNK (ENSRBIG00000042725) #15	LZTS2 (ENSRBIG00000030156) #16	ENSRBIG00000006061	PDZD7 (ENSRBIG00000030466) #17	SFXN3 (ENSRBIG00000033345) #18	KAZALD1 (ENSRBIG00000029657) #19	TLX1 (ENSRBIG00000028309) #20	LBX1 (ENSRBIG00000043576) #21	BTRC (ENSRBIG00000000373) #22	POLL (ENSRBIG00000034819) #23	ENSRBIG00000025168	DPCD (ENSRBIG00000029630) #24	FBXW4 (ENSRBIG00000029703) #25	FGF8 (ENSRBIG00000038141) #26	NPM3 (ENSRBIG00000039086) #27	OGA (ENSRBIG00000042557) #28	KCNIP2 (ENSRBIG00000036933) #29	ARMH3 (ENSRBIG00000030224) #30	HPS6 (ENSRBIG00000021408) #31	LDB1 (ENSRBIG00000023954) #32	PPRC1 (ENSRBIG00000027711) #33	NOLC1 (ENSRBIG00000032216) #34	ELOVL3 (ENSRBIG00000025844) #35	PITX3 (ENSRBIG00000035684) #36
Golden snub-nosed monkey	MODERN SPECIES	3053	WNT8B (ENSRROG00000034714) #7	SEC31B (ENSRROG00000036499) #8	NDUFB8 (ENSRROG00000043538) #9	HIF1AN (ENSRROG00000035456) #10	PAX2 (ENSRROG00000036335) #11	SLF2 (ENSRROG00000032382) #12	SEMA4G (ENSRROG00000029089) #13	MRPL43 (ENSRROG00000036241) #14	TWNK (ENSRROG00000034001) #15	LZTS2 (ENSRROG00000044508) #16	PDZD7 (ENSRROG00000042033) #17	SFXN3 (ENSRROG00000042473) #18	KAZALD1 (ENSRROG00000028521) #19	TLX1 (ENSRROG00000044869) #20	LBX1 (ENSRROG00000044455) #21	BTRC (ENSRROG00000030265) #22	POLL (ENSRROG00000032669) #23	DPCD (ENSRROG00000044275) #24	ENSRROG00000023920	FBXW4 (ENSRROG00000038393) #25	FGF8 (ENSRROG00000038994) #26	NPM3 (ENSRROG00000029912) #27	OGA (ENSRROG00000045455) #28	KCNIP2 (ENSRROG00000029744) #29	ARMH3 (ENSRROG00000032495) #30	HPS6 (ENSRROG00000015252) #31	LDB1 (ENSRROG00000033778) #32	PPRC1 (ENSRROG00000044599) #33	NOLC1 (ENSRROG00000038056) #34	ELOVL3 (ENSRROG00000040217) #35	PITX3 (ENSRROG00000020365) #36
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Vervet Monkey	MODERN SPECIES	28	WNT8B (ENSCSAG00000005607) #7	SEC31B (ENSCSAG00000005583) #8	NDUFB8 (ENSCSAG00000005572) #9	HIF1AN (ENSCSAG00000005570) #10	PAX2 (ENSCSAG00000005568) #11	SLF2 (ENSCSAG00000005566) #12	SEMA4G (ENSCSAG00000005560) #13	MRPL43 (ENSCSAG00000005558) #14	TWNK (ENSCSAG00000005548) #15	LZTS2 (ENSCSAG00000005545) #16	ENSCSAG00000005544 #17	SFXN3 (ENSCSAG00000005542) #18	KAZALD1 (ENSCSAG00000005540) #19	TLX1 (ENSCSAG00000005535) #20	LBX1 (ENSCSAG00000005532) #21	BTRC (ENSCSAG00000005528) #22	POLL (ENSCSAG00000005523) #23	DPCD (ENSCSAG00000005519) #24	FBXW4 (ENSCSAG00000005515) #25	FGF8 (ENSCSAG00000005512) #26	NPM3 (ENSCSAG00000005509) #27	OGA (ENSCSAG00000005507) #28	KCNIP2 (ENSCSAG00000005501) #29	ARMH3 (ENSCSAG00000005491) #30	HPS6 (ENSCSAG00000018450) #31	LDB1 (ENSCSAG00000005474) #32	PPRC1 (ENSCSAG00000005471) #33	NOLC1 (ENSCSAG00000005465) #34	ELOVL3 (ENSCSAG00000005460) #35	PITX3 (ENSCSAG00000005456) #36	GBF1 (ENSCSAG00000005450) #37
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Olive baboon	MODERN SPECIES	2	ENSPANG00000021170 #9	HIF1AN (ENSPANG00000021163) #10	PAX2 (ENSPANG00000021132) #11	SLF2 (ENSPANG00000021133) #12	SEMA4G (ENSPANG00000021137) #13	MRPL43 (ENSPANG00000021122) #14	TWNK (ENSPANG00000021123) #15	LZTS2 (ENSPANG00000021126) #16	PDZD7 (ENSPANG00000021127) #17	SFXN3 (ENSPANG00000021121) #18	KAZALD1 (ENSPANG00000021061) #19	TLX1 (ENSPANG00000021063) #20	ENSPANG00000040129	LBX1 (ENSPANG00000021064) #21	ENSPANG00000045293	BTRC (ENSPANG00000021065) #22	POLL (ENSPANG00000021067) #23	DPCD (ENSPANG00000021068) #24	FBXW4 (ENSPANG00000021059) #25	FGF8 (ENSPANG00000021045) #26	NPM3 (ENSPANG00000021046) #27	OGA (ENSPANG00000021048) #28	KCNIP2 (ENSPANG00000021049) #29	ARMH3 (ENSPANG00000021051) #30	HPS6 (ENSPANG00000004207) #31	LDB1 (ENSPANG00000021043) #32	PPRC1 (ENSPANG00000021042) #33	NOLC1 (ENSPANG00000021014) #34	ELOVL3 (ENSPANG00000021015) #35	PITX3 (ENSPANG00000021020) #36	GBF1 (ENSPANG00000021018) #37
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT00390000003175.a.a #8	ENSGT00390000000628.w.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Sooty mangabey	MODERN SPECIES	598	SEC31B (ENSCATG00000025009) #8	ENSCATG00000012416 #9	HIF1AN (ENSCATG00000013935) #10	PAX2 (ENSCATG00000040463) #11	SLF2 (ENSCATG00000009305) #12	SEMA4G (ENSCATG00000040594) #13	MRPL43 (ENSCATG00000045001) #14	TWNK (ENSCATG00000031735) #15	LZTS2 (ENSCATG00000035009) #16	PDZD7 (ENSCATG00000041708) #17	ENSCATG00000013628	SFXN3 (ENSCATG00000031461) #18	KAZALD1 (ENSCATG00000012292) #19	TLX1 (ENSCATG00000027146) #20	LBX1 (ENSCATG00000015241) #21	BTRC (ENSCATG00000041687) #22	POLL (ENSCATG00000030579) #23	DPCD (ENSCATG00000015600) #24	FBXW4 (ENSCATG00000042023) #25	FGF8 (ENSCATG00000032104) #26	NPM3 (ENSCATG00000013755) #27	OGA (ENSCATG00000032677) #28	KCNIP2 (ENSCATG00000037631) #29	ARMH3 (ENSCATG00000044859) #30	HPS6 (ENSCATG00000007175) #31	LDB1 (ENSCATG00000041139) #32	PPRC1 (ENSCATG00000029634) #33	NOLC1 (ENSCATG00000020949) #34	ELOVL3 (ENSCATG00000029918) #35	PITX3 (ENSCATG00000035980) #36	GBF1 (ENSCATG00000041222) #37
Drill	MODERN SPECIES	660	NDUFB8 (ENSMLEG00000030934) #9	HIF1AN (ENSMLEG00000042618) #10	PAX2 (ENSMLEG00000038896) #11	SLF2 (ENSMLEG00000043602) #12	SEMA4G (ENSMLEG00000032692) #13	MRPL43 (ENSMLEG00000031351) #14	PDIA2 (ENSMLEG00000027539)	TWNK (ENSMLEG00000028857) #15	LZTS2 (ENSMLEG00000043006) #16	PDZD7 (ENSMLEG00000044282) #17	ENSMLEG00000018361	SFXN3 (ENSMLEG00000041643) #18	KAZALD1 (ENSMLEG00000041241) #19	TLX1 (ENSMLEG00000036491) #20	LBX1 (ENSMLEG00000038173) #21	BTRC (ENSMLEG00000037020) #22	POLL (ENSMLEG00000044464) #23	DPCD (ENSMLEG00000036892) #24	FBXW4 (ENSMLEG00000039840) #25	FGF8 (ENSMLEG00000038840) #26	NPM3 (ENSMLEG00000038129) #27	OGA (ENSMLEG00000034257) #28	KCNIP2 (ENSMLEG00000040604) #29	ARMH3 (ENSMLEG00000040244) #30	LDB1 (ENSMLEG00000029239) #32	PPRC1 (ENSMLEG00000035092) #33	NOLC1 (ENSMLEG00000040773) #34	ELOVL3 (ENSMLEG00000042786) #35	ENSMLEG00000041298 #36	GBF1 (ENSMLEG00000030526) #37	NFKB2 (ENSMLEG00000025549)
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000157409 #10	ENSGT00390000014818.g.b.a.b	ENSGT00940000153294.m.a.c.b.p.d	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a.m #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Pig-tailed macaque	MODERN SPECIES	550	HIF1AN (ENSMNEG00000036352) #10	ENSMNEG00000013689	ENSMNEG00000044180	PAX2 (ENSMNEG00000045259) #11	SLF2 (ENSMNEG00000042692) #12	SEMA4G (ENSMNEG00000029411) #13	MRPL43 (ENSMNEG00000038269) #14	TWNK (ENSMNEG00000041560) #15	LZTS2 (ENSMNEG00000022148) #16	ENSMNEG00000000753	PDZD7 (ENSMNEG00000036573) #17	SFXN3 (ENSMNEG00000041774) #18	KAZALD1 (ENSMNEG00000041154) #19	TLX1 (ENSMNEG00000039702) #20	LBX1 (ENSMNEG00000003768) #21	BTRC (ENSMNEG00000043926) #22	POLL (ENSMNEG00000032214) #23	ENSMNEG00000041174	DPCD (ENSMNEG00000039583) #24	FBXW4 (ENSMNEG00000007347) #25	FGF8 (ENSMNEG00000044546) #26	NPM3 (ENSMNEG00000039999) #27	OGA (ENSMNEG00000042719) #28	KCNIP2 (ENSMNEG00000033420) #29	ARMH3 (ENSMNEG00000027491) #30	HPS6 (ENSMNEG00000003739) #31	LDB1 (ENSMNEG00000039832) #32	PPRC1 (ENSMNEG00000031603) #33	NOLC1 (ENSMNEG00000033199) #34	ELOVL3 (ENSMNEG00000026432) #35	PITX3 (ENSMNEG00000027087) #36
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00390000000628.w.a.a.a #9	ENSGT00940000157409 #10	ENSGT00390000014818.g.b.a.b	ENSGT00940000153294.m.a.c.b.p.d	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a.m #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT01100000263577.a.a.b.b.a.a.b.a.a.a.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Crab-eating macaque	MODERN SPECIES	19	WNT8B (ENSMFAG00000035598) #7	SEC31B (ENSMFAG00000043520) #8	ENSMFAG00000040760 #9	HIF1AN (ENSMFAG00000043376) #10	ENSMFAG00000004864	PAX2 (ENSMFAG00000041514) #11	SLF2 (ENSMFAG00000042449) #12	SEMA4G (ENSMFAG00000038405) #13	MRPL43 (ENSMFAG00000036954) #14	TWNK (ENSMFAG00000032824) #15	LZTS2 (ENSMFAG00000048904) #16	PDZD7 (ENSMFAG00000037794) #17	SFXN3 (ENSMFAG00000035501) #18	KAZALD1 (ENSMFAG00000063924) #19	TLX1 (ENSMFAG00000045878) #20	BTRC (ENSMFAG00000005295) #22	POLL (ENSMFAG00000043080) #23	DPCD (ENSMFAG00000036058) #24	FBXW4 (ENSMFAG00000044810) #25	FGF8 (ENSMFAG00000003751) #26	NPM3 (ENSMFAG00000041878) #27	OGA (ENSMFAG00000032188) #28	KCNIP2 (ENSMFAG00000046056) #29	ARMH3 (ENSMFAG00000044833) #30	ENSMFAG00000051632	ENSMFAG00000061163	LDB1 (ENSMFAG00000041257) #32	ENSMFAG00000038589 #33	NOLC1 (ENSMFAG00000044654) #34	ELOVL3 (ENSMFAG00000036362) #35	PITX3 (ENSMFAG00000045143) #36
Rhesus	MODERN SPECIES	19	SEC31B (ENSMMUG00000006622) #8	NDUFB8 (ENSMMUG00000006636) #9	HIF1AN (ENSMMUG00000006637) #10	ENSMMUG00000030563	ENSMMUG00000040838	PAX2 (ENSMMUG00000009163) #11	SLF2 (ENSMMUG00000013418) #12	SEMA4G (ENSMMUG00000010680) #13	MRPL43 (ENSMMUG00000010679) #14	TWNK (ENSMMUG00000064033) #15	LZTS2 (ENSMMUG00000010674) #16	SFXN3 (ENSMMUG00000022620) #18	KAZALD1 (ENSMMUG00000017668) #19	TLX1 (ENSMMUG00000017667) #20	LBX1 (ENSMMUG00000060144) #21	BTRC (ENSMMUG00000006741) #22	POLL (ENSMMUG00000006747) #23	DPCD (ENSMMUG00000006751) #24	FBXW4 (ENSMMUG00000052198) #25	FGF8 (ENSMMUG00000015771) #26	NPM3 (ENSMMUG00000015774) #27	OGA (ENSMMUG00000015775) #28	KCNIP2 (ENSMMUG00000015776) #29	ARMH3 (ENSMMUG00000001539) #30	HPS6 (ENSMMUG00000009374) #31	ENSMMUG00000056725	LDB1 (ENSMMUG00000009375) #32	PPRC1 (ENSMMUG00000001186) #33	NOLC1 (ENSMMUG00000001183) #34	ELOVL3 (ENSMMUG00000022752) #35	PITX3 (ENSMMUG00000056167) #36
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.a #8	ENSGT00390000000628.y #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796.g.b #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Mas night monkey	MODERN SPECIES	658	SEC31B (ENSANAG00000034066) #8	ENSANAG00000019864 #9	HIF1AN (ENSANAG00000035704) #10	PAX2 (ENSANAG00000008318) #11	SLF2 (ENSANAG00000031592) #12	SEMA4G (ENSANAG00000030905) #13	MRPL43 (ENSANAG00000034938) #14	TWNK (ENSANAG00000022264) #15	LZTS2 (ENSANAG00000012310) #16	PDZD7 (ENSANAG00000023929) #17	ENSANAG00000021408	SFXN3 (ENSANAG00000035635) #18	KAZALD1 (ENSANAG00000020414) #19	TLX1 (ENSANAG00000027104) #20	LBX1 (ENSANAG00000036814) #21	BTRC (ENSANAG00000035347) #22	POLL (ENSANAG00000021199) #23	DPCD (ENSANAG00000036663) #24	FBXW4 (ENSANAG00000034872) #25	FGF8 (ENSANAG00000031951) #26	ENSANAG00000027082 #27	OGA (ENSANAG00000034639) #28	KCNIP2 (ENSANAG00000020362) #29	ARMH3 (ENSANAG00000029091) #30	ENSANAG00000019621	LDB1 (ENSANAG00000034893) #32	PPRC1 (ENSANAG00000029448) #33	ELOVL3 (ENSANAG00000037453) #35	PITX3 (ENSANAG00000023017) #36	GBF1 (ENSANAG00000028077) #37	NFKB2 (ENSANAG00000038091)
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000003175.a.a #8	ENSGT00390000000628.y #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796.g.b #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Marmoset	MODERN SPECIES	3	ENSCJAG00000023350	PAX2 (ENSCJAG00000017397) #11	SLF2 (ENSCJAG00000017425) #12	SEMA4G (ENSCJAG00000070347) #13	ENSCJAG00000017480 #14	ENSCJAG00000062174 #14	ENSCJAG00000017487 #15	ENSCJAG00000078679 #15	LZTS2 (ENSCJAG00000041968) #16	PDZD7 (ENSCJAG00000017518) #17	SFXN3 (ENSCJAG00000017527) #18	KAZALD1 (ENSCJAG00000017554) #19	TLX1 (ENSCJAG00000017563) #20	ENSCJAG00000087194	LBX1 (ENSCJAG00000017569) #21	BTRC (ENSCJAG00000017573) #22	POLL (ENSCJAG00000017600) #23	DPCD (ENSCJAG00000017614) #24	FBXW4 (ENSCJAG00000017627) #25	FGF8 (ENSCJAG00000084172) #26	NPM3 (ENSCJAG00000017650) #27	OGA (ENSCJAG00000017657) #28	KCNIP2 (ENSCJAG00000017676) #29	ARMH3 (ENSCJAG00000017743) #30	ENSCJAG00000056816	HPS6 (ENSCJAG00000022973) #31	LDB1 (ENSCJAG00000017777) #32	PPRC1 (ENSCJAG00000017812) #33	NOLC1 (ENSCJAG00000017832) #34	ENSCJAG00000082055	ELOVL3 (ENSCJAG00000079228) #35
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00390000003175.a.a #8	ENSGT00390000000628.y #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796.g.b #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000005532.e.b.e	ENSGT00390000002554 #30	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Capuchin	MODERN SPECIES	71	HIF1AN (ENSCCAG00000028582) #10	PAX2 (ENSCCAG00000035623) #11	SLF2 (ENSCCAG00000016220) #12	SEMA4G (ENSCCAG00000036740) #13	MRPL43 (ENSCCAG00000027213) #14	TWNK (ENSCCAG00000022331) #15	LZTS2 (ENSCCAG00000028122) #16	ENSCCAG00000031185	PDZD7 (ENSCCAG00000027027) #17	SFXN3 (ENSCCAG00000027543) #18	KAZALD1 (ENSCCAG00000025698) #19	TLX1 (ENSCCAG00000022529) #20	ENSCCAG00000018927	LBX1 (ENSCCAG00000027225) #21	TYROBP (ENSCCAG00000030200)	BTRC (ENSCCAG00000028586) #22	POLL (ENSCCAG00000021549) #23	DPCD (ENSCCAG00000031078) #24	FBXW4 (ENSCCAG00000015377) #25	FGF8 (ENSCCAG00000028398) #26	ENSCCAG00000031043 #27	OGA (ENSCCAG00000035955) #28	KCNIP2 (ENSCCAG00000020733) #29	ENSCCAG00000021166	ARMH3 (ENSCCAG00000030229) #30	ENSCCAG00000019492	LDB1 (ENSCCAG00000032351) #32	PPRC1 (ENSCCAG00000014910) #33	NOLC1 (ENSCCAG00000031293) #34	ELOVL3 (ENSCCAG00000030858) #35	PITX3 (ENSCCAG00000024206) #36
Bolivian squirrel monkey	MODERN SPECIES	47	NDUFB8 (ENSSBOG00000032796) #9	HIF1AN (ENSSBOG00000023430) #10	ENSSBOG00000018963	PAX2 (ENSSBOG00000030216) #11	ENSSBOG00000036188	SLF2 (ENSSBOG00000034063) #12	SEMA4G (ENSSBOG00000026805) #13	MRPL43 (ENSSBOG00000022294) #14	TWNK (ENSSBOG00000020346) #15	LZTS2 (ENSSBOG00000032084) #16	PDZD7 (ENSSBOG00000035647) #17	SFXN3 (ENSSBOG00000032559) #18	KAZALD1 (ENSSBOG00000032715) #19	ENSSBOG00000030742 #20	LBX1 (ENSSBOG00000026504) #21	BTRC (ENSSBOG00000034480) #22	POLL (ENSSBOG00000035823) #23	DPCD (ENSSBOG00000024659) #24	FBXW4 (ENSSBOG00000036214) #25	ENSSBOG00000026520	FGF8 (ENSSBOG00000026891) #26	NPM3 (ENSSBOG00000027661) #27	OGA (ENSSBOG00000024431) #28	KCNIP2 (ENSSBOG00000029268) #29	ENSSBOG00000028614	ARMH3 (ENSSBOG00000027965) #30	LDB1 (ENSSBOG00000029453) #32	PPRC1 (ENSSBOG00000021902) #33	NOLC1 (ENSSBOG00000031205) #34	ELOVL3 (ENSSBOG00000028586) #35	ENSSBOG00000016252 #36
Tarsier	MODERN SPECIES	2466																BTRC (ENSTSYG00000004467) #22
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Mouse lemur	MODERN SPECIES	6	WNT8B (ENSMICG00000001314) #7	SEC31B (ENSMICG00000044332) #8	NDUFB8 (ENSMICG00000001341) #9	HIF1AN (ENSMICG00000001348) #10	PAX2 (ENSMICG00000001357) #11	SLF2 (ENSMICG00000001371) #12	SEMA4G (ENSMICG00000030739) #13	ENSMICG00000000014 #14	TWNK (ENSMICG00000045106) #15	LZTS2 (ENSMICG00000000016) #16	PDZD7 (ENSMICG00000000017) #17	SFXN3 (ENSMICG00000000018) #18	KAZALD1 (ENSMICG00000042680) #19	TLX1 (ENSMICG00000000020) #20	LBX1 (ENSMICG00000042752) #21	BTRC (ENSMICG00000007365) #22	ENSMICG00000032738	POLL (ENSMICG00000044578) #23	DPCD (ENSMICG00000007381) #24	FBXW4 (ENSMICG00000030032) #25	FGF8 (ENSMICG00000011733) #26	NPM3 (ENSMICG00000044119) #27	OGA (ENSMICG00000011745) #28	KCNIP2 (ENSMICG00000011754) #29	ARMH3 (ENSMICG00000011767) #30	LDB1 (ENSMICG00000011785) #32	PPRC1 (ENSMICG00000011794) #33	NOLC1 (ENSMICG00000011811) #34	ELOVL3 (ENSMICG00000048136) #35	PITX3 (ENSMICG00000045312) #36	GBF1 (ENSMICG00000011832) #37
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT00940000166765	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Greater bamboo lemur	MODERN SPECIES	375	NDUFB8 (ENSPSMG00000009009) #9	HIF1AN (ENSPSMG00000009028) #10	PAX2 (ENSPSMG00000009108) #11	ENSPSMG00000009133	SLF2 (ENSPSMG00000009144) #12	SEMA4G (ENSPSMG00000009158) #13	ENSPSMG00000009174 #14	TWNK (ENSPSMG00000009185) #15	LZTS2 (ENSPSMG00000009191) #16	PDZD7 (ENSPSMG00000009272) #17	ENSPSMG00000009339	SFXN3 (ENSPSMG00000009356) #18	KAZALD1 (ENSPSMG00000009371) #19	TLX1 (ENSPSMG00000009380) #20	LBX1 (ENSPSMG00000009389) #21	BTRC (ENSPSMG00000009920) #22	POLL (ENSPSMG00000010806) #23	DPCD (ENSPSMG00000010850) #24	FBXW4 (ENSPSMG00000010859) #25
Coquerels sifaka	MODERN SPECIES	870	WNT8B (ENSPCOG00000027043) #7	SEC31B (ENSPCOG00000023825) #8	NDUFB8 (ENSPCOG00000014141) #9	HIF1AN (ENSPCOG00000018877) #10	PAX2 (ENSPCOG00000019488) #11	SLF2 (ENSPCOG00000025314) #12	SEMA4G (ENSPCOG00000023281) #13	MRPL43 (ENSPCOG00000027271) #14	TWNK (ENSPCOG00000014623) #15	LZTS2 (ENSPCOG00000023474) #16	PDZD7 (ENSPCOG00000026114) #17	SFXN3 (ENSPCOG00000025511) #18	KAZALD1 (ENSPCOG00000016724) #19	TLX1 (ENSPCOG00000000103) #20	LBX1 (ENSPCOG00000019643) #21	BTRC (ENSPCOG00000020549) #22	ENSPCOG00000010924	ENSPCOG00000026908	POLL (ENSPCOG00000019314) #23	DPCD (ENSPCOG00000017781) #24	FBXW4 (ENSPCOG00000021206) #25	FGF8 (ENSPCOG00000017981) #26	NPM3 (ENSPCOG00000014704) #27	OGA (ENSPCOG00000014940) #28	KCNIP2 (ENSPCOG00000024556) #29	ARMH3 (ENSPCOG00000019882) #30	LDB1 (ENSPCOG00000014358) #32	PPRC1 (ENSPCOG00000025917) #33	ENSPCOG00000028588	ELOVL3 (ENSPCOG00000022173) #35	PITX3 (ENSPCOG00000018343) #36
Bushbaby	MODERN SPECIES	136	WNT8B (ENSOGAG00000029889) #7	SEC31B (ENSOGAG00000008885) #8	ENSOGAG00000030711 #9	HIF1AN (ENSOGAG00000010425) #10	PAX2 (ENSOGAG00000015274) #11	SLF2 (ENSOGAG00000015280) #12	SEMA4G (ENSOGAG00000015286) #13	MRPL43 (ENSOGAG00000030715) #14	TWNK (ENSOGAG00000029204) #15	LZTS2 (ENSOGAG00000012873) #16	PDZD7 (ENSOGAG00000012875) #17	SFXN3 (ENSOGAG00000012881) #18	KAZALD1 (ENSOGAG00000011722) #19	TLX1 (ENSOGAG00000013614) #20	LBX1 (ENSOGAG00000008679) #21	BTRC (ENSOGAG00000014623) #22	POLL (ENSOGAG00000012042) #23	FBXW4 (ENSOGAG00000033125) #25	FGF8 (ENSOGAG00000024920) #26	NPM3 (ENSOGAG00000010001) #27	ENSOGAG00000010002 #28	KCNIP2 (ENSOGAG00000010006) #29	ARMH3 (ENSOGAG00000010009) #30	HPS6 (ENSOGAG00000033543) #31	LDB1 (ENSOGAG00000016349) #32	PPRC1 (ENSOGAG00000016354) #33	NOLC1 (ENSOGAG00000016359) #34	ELOVL3 (ENSOGAG00000016363) #35	PITX3 (ENSOGAG00000029285) #36	GBF1 (ENSOGAG00000016366) #37	NFKB2 (ENSOGAG00000016379)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Tree shrew	MODERN SPECIES	3389																BTRC (ENSTBEG00000001368) #22	POLL (ENSTBEG00000002691) #23	OGA (ENSTBEG00000003188) #28	ARMH3 (ENSTBEG00000004022) #30	HPS6 (ENSTBEG00000006230) #31	LDB1 (ENSTBEG00000006924) #32	PPRC1 (ENSTBEG00000008148) #33	NOLC1 (ENSTBEG00000008884) #34
Glires	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Prairie vole	MODERN SPECIES	16	Ndufb8 (ENSMOCG00000003247) #9	Hif1an (ENSMOCG00000013701) #10	Pax2 (ENSMOCG00000015583) #11	Slf2 (ENSMOCG00000019122) #12	ENSMOCG00000015291	Sema4g (ENSMOCG00000004639) #13	Mrpl43 (ENSMOCG00000008602) #14	Twnk (ENSMOCG00000004167) #15	Lzts2 (ENSMOCG00000012162) #16	ENSMOCG00000014095 #17	ENSMOCG00000019069 #17	Sfxn3 (ENSMOCG00000022608) #18	Kazald1 (ENSMOCG00000015994) #19	Tlx1 (ENSMOCG00000017096) #20	Lbx1 (ENSMOCG00000018337) #21	Btrc (ENSMOCG00000002451) #22	Poll (ENSMOCG00000006566) #23	Dpcd (ENSMOCG00000013756) #24	Fbxw4 (ENSMOCG00000013178) #25	Fgf8 (ENSMOCG00000021407) #26	Npm3 (ENSMOCG00000013601) #27	Oga (ENSMOCG00000014392) #28	Kcnip2 (ENSMOCG00000022254) #29	Armh3 (ENSMOCG00000011932) #30	Hps6 (ENSMOCG00000001347) #31	ENSMOCG00000004202 #32	ENSMOCG00000014044 #33	ENSMOCG00000018283 #33	Nolc1 (ENSMOCG00000015232) #34	Elovl3 (ENSMOCG00000022790) #35	Pitx3 (ENSMOCG00000012980) #36
Northern American deer mouse	MODERN SPECIES		Sec31b (ENSPEMG00000018861) #8	ENSPEMG00000016062 #9	Hif1an (ENSPEMG00000014638) #10	Pax2 (ENSPEMG00000007884) #11	Slf2 (ENSPEMG00000018671) #12	Sema4g (ENSPEMG00000010019) #13	Mrpl43 (ENSPEMG00000001510) #14	Twnk (ENSPEMG00000013921) #15	Lzts2 (ENSPEMG00000013419) #16	Pdzd7 (ENSPEMG00000004000) #17	ENSPEMG00000030678	Sfxn3 (ENSPEMG00000012869) #18	Kazald1 (ENSPEMG00000018686) #19	Tlx1 (ENSPEMG00000016966) #20	Lbx1 (ENSPEMG00000026119) #21	Btrc (ENSPEMG00000014260) #22	Poll (ENSPEMG00000006876) #23	Dpcd (ENSPEMG00000014479) #24	Fbxw4 (ENSPEMG00000024901) #25	Fgf8 (ENSPEMG00000012905) #26	Npm3 (ENSPEMG00000007731) #27	Oga (ENSPEMG00000008883) #28	Kcnip2 (ENSPEMG00000015045) #29	Armh3 (ENSPEMG00000014466) #30	Hps6 (ENSPEMG00000003992) #31	Ldb1 (ENSPEMG00000011489) #32	Pprc1 (ENSPEMG00000016590) #33	ENSPEMG00000026626	Elovl3 (ENSPEMG00000000778) #35	Pitx3 (ENSPEMG00000026373) #36	Gbf1 (ENSPEMG00000018772) #37
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Chinese hamster chok1gshd	MODERN SPECIES	215	Wnt8b (ENSCGRG00001020386) #7	Sec31b (ENSCGRG00001008897) #8	Ndufb8 (ENSCGRG00001002142) #9	Hif1an (ENSCGRG00001019981) #10	Pax2 (ENSCGRG00001019089) #11	Slf2 (ENSCGRG00001014230) #12	Sema4g (ENSCGRG00001007429) #13	Mrpl43 (ENSCGRG00001003475) #14	Twnk (ENSCGRG00001000710) #15	Lzts2 (ENSCGRG00001023049) #16	Pdzd7 (ENSCGRG00001017672) #17	Sfxn3 (ENSCGRG00001015591) #18	Kazald1 (ENSCGRG00001000227) #19	Tlx1 (ENSCGRG00001021053) #20	Lbx1 (ENSCGRG00001017540) #21	Btrc (ENSCGRG00001015459) #22	Poll (ENSCGRG00001010513) #23	Dpcd (ENSCGRG00001005917) #24	Fbxw4 (ENSCGRG00001003996) #25	Fgf8 (ENSCGRG00001015246) #26	Npm3 (ENSCGRG00001013345) #27	Oga (ENSCGRG00001020553) #28	Kcnip2 (ENSCGRG00001019478) #29	Armh3 (ENSCGRG00001015570) #30	Hps6 (ENSCGRG00001010957) #31	Ldb1 (ENSCGRG00001020743) #32	Pprc1 (ENSCGRG00001011726) #33	Nolc1 (ENSCGRG00001009806) #34	ELOVL3 (ENSCGRG00001005008) #35	Pitx3 (ENSCGRG00001024147) #36	Gbf1 (ENSCGRG00001022494) #37
Golden Hamster	MODERN SPECIES	617	Wnt8b (ENSMAUG00000017837) #7	Sec31b (ENSMAUG00000019690) #8	Ndufb8 (ENSMAUG00000020368) #9	Hif1an (ENSMAUG00000019619) #10	Pax2 (ENSMAUG00000015931) #11	Slf2 (ENSMAUG00000017620) #12	Sema4g (ENSMAUG00000016054) #13	Mrpl43 (ENSMAUG00000015594) #14	Twnk (ENSMAUG00000015403) #15	Lzts2 (ENSMAUG00000018041) #16	ENSMAUG00000015875 #17	Sfxn3 (ENSMAUG00000017975) #18	Kazald1 (ENSMAUG00000017475) #19	Tlx1 (ENSMAUG00000015538) #20	Lbx1 (ENSMAUG00000015198) #21	Btrc (ENSMAUG00000016001) #22	Poll (ENSMAUG00000014674) #23	Dpcd (ENSMAUG00000017884) #24	ENSMAUG00000015787 #25	ENSMAUG00000015569	Fgf8 (ENSMAUG00000016383) #26	Npm3 (ENSMAUG00000015218) #27	Oga (ENSMAUG00000015052) #28	Kcnip2 (ENSMAUG00000019652) #29	Armh3 (ENSMAUG00000019449) #30	Hps6 (ENSMAUG00000002039) #31	Ldb1 (ENSMAUG00000018515) #32	Pprc1 (ENSMAUG00000016674) #33	Elovl3 (ENSMAUG00000013792) #35	Pitx3 (ENSMAUG00000015434) #36	ENSMAUG00000017791 #37
Murinae	ANCESTRAL SPECIES		ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801.d #36	ENSGT00940000156925 #37
Mus	ANCESTRAL SPECIES		ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801.d #36	ENSGT00940000156925 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000169317	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a.p #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801.d #36	ENSGT00940000156925 #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000169317	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a.p #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801.d #36	ENSGT00940000156925 #37
Mouse	MODERN SPECIES	10	Sec31b (ENSMUSG00000051984) #8	Gm20538 (ENSMUSG00000091471)	Ndufb8 (ENSMUSG00000025204) #9	Hif1an (ENSMUSG00000036450) #10	Pax2 (ENSMUSG00000004231) #11	Slf2 (ENSMUSG00000036097) #12	Sema4g (ENSMUSG00000025207) #13	Mrpl43 (ENSMUSG00000025208) #14	Twnk (ENSMUSG00000025209) #15	Lzts2 (ENSMUSG00000035342) #16	Pdzd7 (ENSMUSG00000074818) #17	Sfxn3 (ENSMUSG00000025212) #18	Kazald1 (ENSMUSG00000025213) #19	Tlx1 (ENSMUSG00000025215) #20	Lbx1 (ENSMUSG00000025216) #21	Btrc (ENSMUSG00000025217) #22	Poll (ENSMUSG00000025218) #23	Dpcd (ENSMUSG00000041035) #24	Fbxw4 (ENSMUSG00000040913) #25	Fgf8 (ENSMUSG00000025219) #26	Npm3 (ENSMUSG00000056209) #27	Oga (ENSMUSG00000025220) #28	Kcnip2 (ENSMUSG00000025221) #29	Armh3 (ENSMUSG00000039901) #30	Hps6 (ENSMUSG00000074811) #31	Ldb1 (ENSMUSG00000025223) #32	Pprc1 (ENSMUSG00000055491) #33	Nolc1 (ENSMUSG00000015176) #34	Elovl3 (ENSMUSG00000038754) #35	Pitx3 (ENSMUSG00000025229) #36	Gbf1 (ENSMUSG00000025224) #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000169317	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a.p #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801.d #36	ENSGT00940000156925 #37
spretus	MODERN SPECIES	10	Sec31b (MGP_SPRETEiJ_G0023921) #8	MGP_SPRETEiJ_G0023922	Ndufb8 (MGP_SPRETEiJ_G0023923) #9	Hif1an (MGP_SPRETEiJ_G0023924) #10	Pax2 (MGP_SPRETEiJ_G0023925) #11	Slf2 (MGP_SPRETEiJ_G0023926) #12	Sema4g (MGP_SPRETEiJ_G0023927) #13	Mrpl43 (MGP_SPRETEiJ_G0023928) #14	Twnk (MGP_SPRETEiJ_G0023929) #15	Lzts2 (MGP_SPRETEiJ_G0023930) #16	Pdzd7 (MGP_SPRETEiJ_G0023931) #17	Sfxn3 (MGP_SPRETEiJ_G0023932) #18	Kazald1 (MGP_SPRETEiJ_G0023933) #19	Tlx1 (MGP_SPRETEiJ_G0023934) #20	Lbx1 (MGP_SPRETEiJ_G0023935) #21	Btrc (MGP_SPRETEiJ_G0023936) #22	Poll (MGP_SPRETEiJ_G0023937) #23	Dpcd (MGP_SPRETEiJ_G0023938) #24	MGP_SPRETEiJ_G0023939 #25	Fgf8 (MGP_SPRETEiJ_G0023940) #26	Npm3 (MGP_SPRETEiJ_G0023941) #27	Oga (MGP_SPRETEiJ_G0023942) #28	Kcnip2 (MGP_SPRETEiJ_G0023943) #29	Armh3 (MGP_SPRETEiJ_G0023944) #30	Hps6 (MGP_SPRETEiJ_G0023945) #31	Ldb1 (MGP_SPRETEiJ_G0023946) #32	Pprc1 (MGP_SPRETEiJ_G0023947) #33	Nolc1 (MGP_SPRETEiJ_G0023948) #34	Elovl3 (MGP_SPRETEiJ_G0023949) #35	Pitx3 (MGP_SPRETEiJ_G0023950) #36	Gbf1 (MGP_SPRETEiJ_G0023951) #37
Steppe mouse	MODERN SPECIES	3317	Sec31b (ENSMSIG00000013336) #8	Ndufb8 (ENSMSIG00000013308) #9	Hif1an (ENSMSIG00000013295) #10	Pax2 (ENSMSIG00000013194) #11	Slf2 (ENSMSIG00000013125) #12	Sema4g (ENSMSIG00000013048) #13	Mrpl43 (ENSMSIG00000013030) #14	Twnk (ENSMSIG00000013010) #15	Lzts2 (ENSMSIG00000012984) #16	ENSMSIG00000012980	Pdzd7 (ENSMSIG00000012912) #17	Sfxn3 (ENSMSIG00000012828) #18	Kazald1 (ENSMSIG00000012802) #19	Tlx1 (ENSMSIG00000012781) #20	Lbx1 (ENSMSIG00000012769) #21	Btrc (ENSMSIG00000012680) #22	Poll (ENSMSIG00000012645) #23	ENSMSIG00000012629 #24	ENSMSIG00000012591 #25	Fgf8 (ENSMSIG00000012521) #26	Npm3 (ENSMSIG00000012497) #27	Oga (ENSMSIG00000012429) #28	ENSMSIG00000011884 #29	Armh3 (ENSMSIG00000011813) #30	Hps6 (ENSMSIG00000011802) #31	Ldb1 (ENSMSIG00000011766) #32	Pprc1 (ENSMSIG00000011750) #33	Nolc1 (ENSMSIG00000011702) #34	Elovl3 (ENSMSIG00000011691) #35	Pitx3 (ENSMSIG00000011679) #36	Gbf1 (ENSMSIG00000011585) #37
Ryukyu mouse	MODERN SPECIES	10	Sec31b (MGP_CAROLIEiJ_G0023000) #8	MGP_CAROLIEiJ_G0023001	Ndufb8 (MGP_CAROLIEiJ_G0023002) #9	Hif1an (MGP_CAROLIEiJ_G0023003) #10	Pax2 (MGP_CAROLIEiJ_G0023004) #11	Slf2 (MGP_CAROLIEiJ_G0023005) #12	Sema4g (MGP_CAROLIEiJ_G0023006) #13	Mrpl43 (MGP_CAROLIEiJ_G0023007) #14	Twnk (MGP_CAROLIEiJ_G0023008) #15	Lzts2 (MGP_CAROLIEiJ_G0023009) #16	Pdzd7 (MGP_CAROLIEiJ_G0023010) #17	Sfxn3 (MGP_CAROLIEiJ_G0023011) #18	Kazald1 (MGP_CAROLIEiJ_G0023012) #19	Tlx1 (MGP_CAROLIEiJ_G0023013) #20	Lbx1 (MGP_CAROLIEiJ_G0023014) #21	Btrc (MGP_CAROLIEiJ_G0023015) #22	Poll (MGP_CAROLIEiJ_G0023016) #23	Dpcd (MGP_CAROLIEiJ_G0023017) #24	Fbxw4 (MGP_CAROLIEiJ_G0023018) #25	Fgf8 (MGP_CAROLIEiJ_G0023019) #26	Npm3 (MGP_CAROLIEiJ_G0023020) #27	Oga (MGP_CAROLIEiJ_G0023021) #28	Kcnip2 (MGP_CAROLIEiJ_G0023022) #29	Armh3 (MGP_CAROLIEiJ_G0023023) #30	Hps6 (MGP_CAROLIEiJ_G0023024) #31	Ldb1 (MGP_CAROLIEiJ_G0023025) #32	Pprc1 (MGP_CAROLIEiJ_G0023026) #33	Nolc1 (MGP_CAROLIEiJ_G0023027) #34	Elovl3 (MGP_CAROLIEiJ_G0023028) #35	Pitx3 (MGP_CAROLIEiJ_G0023029) #36	Gbf1 (MGP_CAROLIEiJ_G0023030) #37
Shrew mouse	MODERN SPECIES		MGP_PahariEiJ_G0014490	MGP_PahariEiJ_G0014491	Ndufb8 (MGP_PahariEiJ_G0014492) #9	Hif1an (MGP_PahariEiJ_G0014493) #10	Pax2 (MGP_PahariEiJ_G0014494) #11	Slf2 (MGP_PahariEiJ_G0014495) #12	Sema4g (MGP_PahariEiJ_G0014496) #13	Mrpl43 (MGP_PahariEiJ_G0014497) #14	Twnk (MGP_PahariEiJ_G0014498) #15	MGP_PahariEiJ_G0014499 #16	Pdzd7 (MGP_PahariEiJ_G0014500) #17	Sfxn3 (MGP_PahariEiJ_G0014501) #18	Kazald1 (MGP_PahariEiJ_G0014502) #19	Tlx1 (MGP_PahariEiJ_G0014503) #20	Lbx1 (MGP_PahariEiJ_G0014504) #21	Btrc (MGP_PahariEiJ_G0014505) #22	Poll (MGP_PahariEiJ_G0014506) #23	Dpcd (MGP_PahariEiJ_G0014507) #24	MGP_PahariEiJ_G0014508 #25	Fgf8 (MGP_PahariEiJ_G0014509) #26	Npm3 (MGP_PahariEiJ_G0014510) #27	Oga (MGP_PahariEiJ_G0014511) #28	Kcnip2 (MGP_PahariEiJ_G0014512) #29	Armh3 (MGP_PahariEiJ_G0014513) #30	Hps6 (MGP_PahariEiJ_G0014514) #31	Ldb1 (MGP_PahariEiJ_G0014515) #32	Pprc1 (MGP_PahariEiJ_G0014516) #33	Nolc1 (MGP_PahariEiJ_G0014517) #34	Elovl3 (MGP_PahariEiJ_G0014518) #35	Pitx3 (MGP_PahariEiJ_G0014519) #36	Gbf1 (MGP_PahariEiJ_G0014520) #37
Rat	MODERN SPECIES		Sec31b (ENSRNOG00000025781) #8	Ndufb8 (ENSRNOG00000014078) #9	Hif1an (ENSRNOG00000014234) #10	Pax2 (ENSRNOG00000014253) #11	Slf2 (ENSRNOG00000014482) #12	AC121209.1 (ENSRNOG00000036588)	Sema4g (ENSRNOG00000014650) #13	Mrpl43 (ENSRNOG00000014890) #14	Twnk (ENSRNOG00000014935) #15	Lzts2 (ENSRNOG00000014969) #16	Pdzd7 (ENSRNOG00000032946) #17	Sfxn3 (ENSRNOG00000015442) #18	Kazald1 (ENSRNOG00000016058) #19	Tlx1 (ENSRNOG00000016120) #20	Lbx1 (ENSRNOG00000025520) #21	Btrc (ENSRNOG00000016280) #22	Poll (ENSRNOG00000016748) #23	Dpcd (ENSRNOG00000017241) #24	Fbxw4 (ENSRNOG00000046211) #25	Fgf8 (ENSRNOG00000017524) #26	Npm3 (ENSRNOG00000017622) #27	Oga (ENSRNOG00000017822) #28	Kcnip2 (ENSRNOG00000018018) #29	Armh3 (ENSRNOG00000025523) #30	Hps6 (ENSRNOG00000018433) #31	Ldb1 (ENSRNOG00000018468) #32	Pprc1 (ENSRNOG00000018561) #33	Nolc1 (ENSRNOG00000018704) #34	Elovl3 (ENSRNOG00000019124) #35	Pitx3 (ENSRNOG00000019194) #36	Gbf1 (ENSRNOG00000026048) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300	Sec31b (ENSNGAG00000003078) #8	Ndufb8 (ENSNGAG00000022265) #9	Hif1an (ENSNGAG00000022464) #10	Pax2 (ENSNGAG00000011967) #11	Slf2 (ENSNGAG00000022141) #12	Sema4g (ENSNGAG00000014131) #13	Mrpl43 (ENSNGAG00000023476) #14	Twnk (ENSNGAG00000023645) #15	Lzts2 (ENSNGAG00000023942) #16	ENSNGAG00000004602 #17	Sfxn3 (ENSNGAG00000017442) #18	Kazald1 (ENSNGAG00000011414) #19	Tlx1 (ENSNGAG00000024255) #20	Lbx1 (ENSNGAG00000023979) #21	ENSNGAG00000023625	Btrc (ENSNGAG00000001803) #22	Poll (ENSNGAG00000021402) #23	Dpcd (ENSNGAG00000015959) #24	Fbxw4 (ENSNGAG00000022749) #25	Fgf8 (ENSNGAG00000018999) #26	ENSNGAG00000022833 #27	Oga (ENSNGAG00000011804) #28	Kcnip2 (ENSNGAG00000024132) #29	Armh3 (ENSNGAG00000023147) #30	Hps6 (ENSNGAG00000012214) #31	ENSNGAG00000021169	Ldb1 (ENSNGAG00000024157) #32	Pprc1 (ENSNGAG00000016516) #33	Nolc1 (ENSNGAG00000024139) #34	Elovl3 (ENSNGAG00000013825) #35	Pitx3 (ENSNGAG00000021500) #36
Lesser Egyptian jerboa	MODERN SPECIES	70	Wnt8b (ENSJJAG00000010131) #7	Sec31b (ENSJJAG00000020478) #8	Ndufb8 (ENSJJAG00000021005) #9	Hif1an (ENSJJAG00000013793) #10	Pax2 (ENSJJAG00000000526) #11	Slf2 (ENSJJAG00000023625) #12	Sema4g (ENSJJAG00000000673) #13	Mrpl43 (ENSJJAG00000023922) #14	ENSJJAG00000006388 #15	Lzts2 (ENSJJAG00000015056) #16	ENSJJAG00000014285 #17	Sfxn3 (ENSJJAG00000016145) #18	Kazald1 (ENSJJAG00000021687) #19	ENSJJAG00000006430 #20	Lbx1 (ENSJJAG00000021756) #21	Btrc (ENSJJAG00000011813) #22	Poll (ENSJJAG00000024104) #23	Dpcd (ENSJJAG00000010119) #24	ENSJJAG00000016263 #25	Fgf8 (ENSJJAG00000014440) #26	Npm3 (ENSJJAG00000018907) #27	Oga (ENSJJAG00000020565) #28	Kcnip2 (ENSJJAG00000019358) #29	Armh3 (ENSJJAG00000018861) #30	Hps6 (ENSJJAG00000011662) #31	Ldb1 (ENSJJAG00000012307) #32	ENSJJAG00000024088 #33	ENSJJAG00000005177 #33	Nolc1 (ENSJJAG00000021131) #34	Elovl3 (ENSJJAG00000020437) #35	Pitx3 (ENSJJAG00000020721) #36
Kangaroo rat	MODERN SPECIES	355	Wnt8b (ENSDORG00000000610) #7	Sec31b (ENSDORG00000000124) #8	Ndufb8 (ENSDORG00000006217) #9	Hif1an (ENSDORG00000026469) #10	Pax2 (ENSDORG00000006193) #11	Slf2 (ENSDORG00000004458) #12	Sema4g (ENSDORG00000004459) #13	Mrpl43 (ENSDORG00000023986) #14	Twnk (ENSDORG00000004461) #15	Lzts2 (ENSDORG00000016411) #16	ENSDORG00000016413 #17	Sfxn3 (ENSDORG00000016415) #18	Kazald1 (ENSDORG00000016417) #19	ENSDORG00000025952 #20	Lbx1 (ENSDORG00000029567) #21	Btrc (ENSDORG00000014204) #22	Poll (ENSDORG00000024173) #23	Dpcd (ENSDORG00000014209) #24	Fbxw4 (ENSDORG00000014212) #25	Fgf8 (ENSDORG00000029227) #26	Npm3 (ENSDORG00000003491) #27	Oga (ENSDORG00000003493) #28	Kcnip2 (ENSDORG00000003495) #29	Armh3 (ENSDORG00000003496) #30	ENSDORG00000023337	Hps6 (ENSDORG00000028123) #31	Ldb1 (ENSDORG00000003498) #32	Pprc1 (ENSDORG00000001046) #33	Nolc1 (ENSDORG00000001056) #34	Elovl3 (ENSDORG00000027255) #35	Pitx3 (ENSDORG00000023993) #36
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Marmotini	ANCESTRAL SPECIES	16	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Marmotini_b	ANCESTRAL SPECIES	76	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409.e #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Squirrel	MODERN SPECIES	200	WNT8B (ENSSTOG00000022425) #7	SEC31B (ENSSTOG00000009253) #8	NDUFB8 (ENSSTOG00000020727) #9	ENSSTOG00000009302 #10	PAX2 (ENSSTOG00000011575) #11	SLF2 (ENSSTOG00000008951) #12	SEMA4G (ENSSTOG00000008994) #13	MRPL43 (ENSSTOG00000009016) #14	TWNK (ENSSTOG00000009030) #15	LZTS2 (ENSSTOG00000015232) #16	PDZD7 (ENSSTOG00000009046) #17	SFXN3 (ENSSTOG00000026614) #18	KAZALD1 (ENSSTOG00000015240) #19	ENSSTOG00000023842 #20	LBX1 (ENSSTOG00000006491) #21	BTRC (ENSSTOG00000022481) #22	POLL (ENSSTOG00000011485) #23	DPCD (ENSSTOG00000011490) #24	FBXW4 (ENSSTOG00000011495) #25	FGF8 (ENSSTOG00000023351) #26	NPM3 (ENSSTOG00000022621) #27	ENSSTOG00000032901 #28	KCNIP2 (ENSSTOG00000021030) #29	ARMH3 (ENSSTOG00000015633) #30	HPS6 (ENSSTOG00000024918) #31	LDB1 (ENSSTOG00000002139) #32	ENSSTOG00000034359 #33	ENSSTOG00000002156 #33	NOLC1 (ENSSTOG00000002168) #34	ELOVL3 (ENSSTOG00000015013) #35	PITX3 (ENSSTOG00000015025) #36
Arctic ground squirrel	MODERN SPECIES	373	NDUFB8 (ENSUPAG00010010693) #9	ENSUPAG00010010677 #10	PAX2 (ENSUPAG00010010652) #11	SLF2 (ENSUPAG00010010631) #12	SEMA4G (ENSUPAG00010010602) #13	MRPL43 (ENSUPAG00010010598) #14	TWNK (ENSUPAG00010010588) #15	LZTS2 (ENSUPAG00010010572) #16	ENSUPAG00010010561 #17	ENSUPAG00010010444 #17	SFXN3 (ENSUPAG00010010359) #18	KAZALD1 (ENSUPAG00010010340) #19	TLX1 (ENSUPAG00010010336) #20	LBX1 (ENSUPAG00010010328) #21	ENSUPAG00010010321	BTRC (ENSUPAG00010010245) #22	POLL (ENSUPAG00010010241) #23	DPCD (ENSUPAG00010010220) #24	FBXW4 (ENSUPAG00010010202) #25	FGF8 (ENSUPAG00010010083) #26	NPM3 (ENSUPAG00010010073) #27	OGA (ENSUPAG00010010052) #28	KCNIP2 (ENSUPAG00010009866) #29	ARMH3 (ENSUPAG00010009848) #30	HPS6 (ENSUPAG00010009845) #31	ENSUPAG00010009826 #32	PPRC1 (ENSUPAG00010009814) #33	NOLC1 (ENSUPAG00010009783) #34
Alpin marmot	MODERN SPECIES	39	NDUFB8 (ENSMMMG00000023049) #9	HIF1AN (ENSMMMG00000023051) #10	PAX2 (ENSMMMG00000023055) #11	SLF2 (ENSMMMG00000023066) #12	SEMA4G (ENSMMMG00000023078) #13	MRPL43 (ENSMMMG00000023087) #14	TWNK (ENSMMMG00000023092) #15	ENSMMMG00000023095 #16	ENSMMMG00000023099 #17	ENSMMMG00000023144 #17	ENSMMMG00000023146	SFXN3 (ENSMMMG00000023149) #18	KAZALD1 (ENSMMMG00000023167) #19	ENSMMMG00000023172 #20	LBX1 (ENSMMMG00000023177) #21	BTRC (ENSMMMG00000023182) #22	POLL (ENSMMMG00000023200) #23	DPCD (ENSMMMG00000023210) #24	FBXW4 (ENSMMMG00000023212) #25	FGF8 (ENSMMMG00000023215) #26	NPM3 (ENSMMMG00000023217) #27	OGA (ENSMMMG00000023220) #28	KCNIP2 (ENSMMMG00000023225) #29	ARMH3 (ENSMMMG00000023233) #30	HPS6 (ENSMMMG00000023243) #31	LDB1 (ENSMMMG00000023248) #32	PPRC1 (ENSMMMG00000023259) #33	NOLC1 (ENSMMMG00000023274) #34	ELOVL3 (ENSMMMG00000023279) #35	PITX3 (ENSMMMG00000023281) #36	GBF1 (ENSMMMG00000023283) #37
Eurasian red squirrel	MODERN SPECIES	13	WNT8B (ENSSVLG00005010847) #7	SEC31B (ENSSVLG00005010799) #8	ENSSVLG00005005940 #9	HIF1AN (ENSSVLG00005005917) #10	PAX2 (ENSSVLG00005005719) #11	SLF2 (ENSSVLG00005005553) #12	SEMA4G (ENSSVLG00005005503) #13	MRPL43 (ENSSVLG00005005460) #14	TWNK (ENSSVLG00005005412) #15	LZTS2 (ENSSVLG00005005380) #16	PDZD7 (ENSSVLG00005005347) #17	SFXN3 (ENSSVLG00005005315) #18	KAZALD1 (ENSSVLG00005005289) #19	TLX1 (ENSSVLG00005005266) #20	LBX1 (ENSSVLG00005005245) #21	BTRC (ENSSVLG00005005205) #22	POLL (ENSSVLG00005005135) #23	DPCD (ENSSVLG00005005104) #24	FBXW4 (ENSSVLG00005005056) #25	FGF8 (ENSSVLG00005005038) #26	OGA (ENSSVLG00005004824) #28	KCNIP2 (ENSSVLG00005004570) #29	ARMH3 (ENSSVLG00005004399) #30	HPS6 (ENSSVLG00005004366) #31	LDB1 (ENSSVLG00005004323) #32	PPRC1 (ENSSVLG00005004252) #33	NOLC1 (ENSSVLG00005004225) #34	ELOVL3 (ENSSVLG00005004199) #35	PITX3 (ENSSVLG00005004181) #36	GBF1 (ENSSVLG00005004145) #37	NFKB2 (ENSSVLG00005004099)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.b #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Long-tailed chinchilla	MODERN SPECIES	192	WNT8B (ENSCLAG00000008704) #7	ENSCLAG00000008608 #8	NDUFB8 (ENSCLAG00000008248) #9	HIF1AN (ENSCLAG00000008195) #10	PAX2 (ENSCLAG00000007272) #11	SLF2 (ENSCLAG00000003936) #12	SEMA4G (ENSCLAG00000003839) #13	MRPL43 (ENSCLAG00000003510) #14	TWNK (ENSCLAG00000003486) #15	LZTS2 (ENSCLAG00000003292) #16	PDZD7 (ENSCLAG00000003178) #17	SFXN3 (ENSCLAG00000001996) #18	ENSCLAG00000001318 #19	ENSCLAG00000001309 #20	LBX1 (ENSCLAG00000001298) #21	BTRC (ENSCLAG00000001243) #22	POLL (ENSCLAG00000001165) #23	DPCD (ENSCLAG00000001147) #24	FBXW4 (ENSCLAG00000001132) #25	FGF8 (ENSCLAG00000001075) #26	OGA (ENSCLAG00000001003) #28	KCNIP2 (ENSCLAG00000000954) #29	ARMH3 (ENSCLAG00000001673) #30	HPS6 (ENSCLAG00000001624) #31	LDB1 (ENSCLAG00000001555) #32	PPRC1 (ENSCLAG00000001364) #33	NOLC1 (ENSCLAG00000001046) #34	ELOVL3 (ENSCLAG00000005342) #35	PITX3 (ENSCLAG00000005073) #36	GBF1 (ENSCLAG00000004338) #37	NFKB2 (ENSCLAG00000004104)
Degu	MODERN SPECIES	83	WNT8B (ENSODEG00000006011) #7	ENSODEG00000005730	NDUFB8 (ENSODEG00000006621) #9	ENSODEG00000007007 #10	PAX2 (ENSODEG00000006975) #11	SLF2 (ENSODEG00000008647) #12	SEMA4G (ENSODEG00000005984) #13	ENSODEG00000006668 #14	TWNK (ENSODEG00000006072) #15	LZTS2 (ENSODEG00000006752) #16	PDZD7 (ENSODEG00000006718) #17	SFXN3 (ENSODEG00000007542) #18	KAZALD1 (ENSODEG00000005804) #19	ENSODEG00000006094 #20	LBX1 (ENSODEG00000006684) #21	BTRC (ENSODEG00000008464) #22	POLL (ENSODEG00000007469) #23	DPCD (ENSODEG00000005983) #24	FBXW4 (ENSODEG00000007897) #25	FGF8 (ENSODEG00000006423) #26	NPM3 (ENSODEG00000006704) #27	OGA (ENSODEG00000008001) #28	ENSODEG00000019634	KCNIP2 (ENSODEG00000007199) #29	ENSODEG00000010569	ARMH3 (ENSODEG00000007299) #30	ENSODEG00000019424	HPS6 (ENSODEG00000007638) #31	LDB1 (ENSODEG00000009090) #32	ENSODEG00000009568 #33	ENSODEG00000006985 #33
Guinea pig	MODERN SPECIES	11	WNT8B (ENSCPOG00000027283) #7	SEC31B (ENSCPOG00000007432) #8	NDUFB8 (ENSCPOG00000024799) #9	HIF1AN (ENSCPOG00000009881) #10	PAX2 (ENSCPOG00000000939) #11	SLF2 (ENSCPOG00000000940) #12	SEMA4G (ENSCPOG00000036564) #13	MRPL43 (ENSCPOG00000040768) #14	TWNK (ENSCPOG00000000950) #15	LZTS2 (ENSCPOG00000035545) #16	ENSCPOG00000000952 #17	SFXN3 (ENSCPOG00000000955) #18	KAZALD1 (ENSCPOG00000015270) #19	TLX1 (ENSCPOG00000003194) #20	LBX1 (ENSCPOG00000025830) #21	BTRC (ENSCPOG00000005488) #22	POLL (ENSCPOG00000005493) #23	DPCD (ENSCPOG00000005499) #24	ENSCPOG00000032448 #25	FGF8 (ENSCPOG00000021533) #26	NPM3 (ENSCPOG00000006301) #27	OGA (ENSCPOG00000000219) #28	KCNIP2 (ENSCPOG00000011918) #29	ARMH3 (ENSCPOG00000031847) #30	HPS6 (ENSCPOG00000006084) #31	LDB1 (ENSCPOG00000010311) #32	PPRC1 (ENSCPOG00000032149) #33	NOLC1 (ENSCPOG00000004504) #34	ELOVL3 (ENSCPOG00000014884) #35	PITX3 (ENSCPOG00000036365) #36	GBF1 (ENSCPOG00000004514) #37
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000039278 #9	HIF1AN (ENSHGLG00000008386) #10	PAX2 (ENSHGLG00000007584) #11	ENSHGLG00000033080	SLF2 (ENSHGLG00000011302) #12	ENSHGLG00000040204 #14	ENSHGLG00000002240 #15	LZTS2 (ENSHGLG00000039393) #16	ENSHGLG00000035111 #17	PDZD7 (ENSHGLG00000046047) #17	SFXN3 (ENSHGLG00000002107) #18	KAZALD1 (ENSHGLG00000002854) #19	TLX1 (ENSHGLG00000001823) #20	LBX1 (ENSHGLG00000047414) #21	ENSHGLG00000019498	ENSHGLG00000002588 #22	POLL (ENSHGLG00000019504) #23	DPCD (ENSHGLG00000019507) #24	FBXW4 (ENSHGLG00000018911) #25	FGF8 (ENSHGLG00000013482) #26	NPM3 (ENSHGLG00000049984) #27	OGA (ENSHGLG00000019033) #28	KCNIP2 (ENSHGLG00000019185) #29	ENSHGLG00000043110 #30	ARMH3 (ENSHGLG00000002014) #30	HPS6 (ENSHGLG00000020621) #31	LDB1 (ENSHGLG00000002254) #32	PPRC1 (ENSHGLG00000002783) #33	NOLC1 (ENSHGLG00000003156) #34	ENSHGLG00000049553	ELOVL3 (ENSHGLG00000003511) #35
Naked mole-rat female	MODERN SPECIES		SNAP91 (ENSHGLG00000018839)	PRSS35 (ENSHGLG00000044289)	ENSHGLG00000001766	RWDD2A (ENSHGLG00000038854)	ENSHGLG00000002334	DOP1A (ENSHGLG00000002584)	ENSHGLG00000040976	UBE3D (ENSHGLG00000002791)	ENSHGLG00000020002	ENSHGLG00000019563	ENSHGLG00000037636	TPBG (ENSHGLG00000003190)	ENSHGLG00000003363	ENSHGLG00000032662	ENSHGLG00000036762	ENSHGLG00000032562 #22	ENSHGLG00000002149	ENSHGLG00000002224	ENSHGLG00000002312	ENSHGLG00000002573	ENSHGLG00000002662	CRISP3 (ENSHGLG00000043304)	ENSHGLG00000032826	DEFB110 (ENSHGLG00000004350)	ENSHGLG00000020379	ENSHGLG00000032464	TFAP2D (ENSHGLG00000003984)	TFAP2B (ENSHGLG00000008303)	ENSHGLG00000005244	PKHD1 (ENSHGLG00000018109)	ENSHGLG00000021226
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092.a.a ##34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37	ENSGT00940000160968
Rabbit	MODERN SPECIES	9	SEC31B (ENSOCUG00000000988) #8	NDUFB8 (ENSOCUG00000000989) #9	HIF1AN (ENSOCUG00000000991) #10	PAX2 (ENSOCUG00000012860) #11	SLF2 (ENSOCUG00000002728) #12	SEMA4G (ENSOCUG00000002737) #13	MRPL43 (ENSOCUG00000002742) #14	TWNK (ENSOCUG00000002746) #15	LZTS2 (ENSOCUG00000021502) #16	ENSOCUG00000006651 #17	ENSOCUG00000031924 #17	SFXN3 (ENSOCUG00000002751) #18	KAZALD1 (ENSOCUG00000002974) #19	TLX1 (ENSOCUG00000013136) #20	LBX1 (ENSOCUG00000013145) #21	BTRC (ENSOCUG00000015353) #22	POLL (ENSOCUG00000015364) #23	DPCD (ENSOCUG00000015373) #24	FBXW4 (ENSOCUG00000015386) #25	ENSOCUG00000027864 #26	NPM3 (ENSOCUG00000016819) #27	OGA (ENSOCUG00000002768) #28	KCNIP2 (ENSOCUG00000026348) #29	ARMH3 (ENSOCUG00000002776) #30	LDB1 (ENSOCUG00000025582) #32	PPRC1 (ENSOCUG00000000510) #33	ENSOCUG00000000516 ##34	ELOVL3 (ENSOCUG00000016071) #35	PITX3 (ENSOCUG00000016065) #36	GBF1 (ENSOCUG00000005714) #37	NFKB2 (ENSOCUG00000005735)
Pika	MODERN SPECIES	604							SLF2 (ENSOPRG00000007048) #12	ENSOPRG00000007068 #13	MRPL43 (ENSOPRG00000007093) #14	TWNK (ENSOPRG00000007100) #15	LZTS2 (ENSOPRG00000007108) #16	ENSOPRG00000007119 #17	KAZALD1 (ENSOPRG00000007134) #19	TLX1 (ENSOPRG00000007137) #20	LBX1 (ENSOPRG00000007142) #21	BTRC (ENSOPRG00000007146) #22	POLL (ENSOPRG00000007162) #23	DPCD (ENSOPRG00000007167) #24	ENSOPRG00000007176 #25
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159672 #22
Hedgehog	MODERN SPECIES	6055																BTRC (ENSEEUG00000015173) #22
Common shrew	MODERN SPECIES	4720																BTRC (ENSSARG00000003650) #22	DPCD (ENSSARG00000003692) #24
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Suina	ANCESTRAL SPECIES	6	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Pig	MODERN SPECIES	5	NDUFB8 (ENSSSCG00000006166) #9	HIF1AN (ENSSSCG00000010555) #10	ENSSSCG00000044499	PAX2 (ENSSSCG00000010556) #11	SLF2 (ENSSSCG00000037592) #12	SEMA4G (ENSSSCG00000029533) #13	MRPL43 (ENSSSCG00000010560) #14	TWNK (ENSSSCG00000030428) #15	LZTS2 (ENSSSCG00000021798) #16	ENSSSCG00000010559 #17	ENSSSCG00000053081	SFXN3 (ENSSSCG00000022005) #18	KAZALD1 (ENSSSCG00000022429) #19	TLX1 (ENSSSCG00000010561) #20	LBX1 (ENSSSCG00000022693) #21	BTRC (ENSSSCG00000010563) #22	ENSSSCG00000044625	POLL (ENSSSCG00000010564) #23	DPCD (ENSSSCG00000010565) #24	FBXW4 (ENSSSCG00000010566) #25	FGF8 (ENSSSCG00000036146) #26	NPM3 (ENSSSCG00000010568) #27	OGA (ENSSSCG00000010569) #28	KCNIP2 (ENSSSCG00000010570) #29	ARMH3 (ENSSSCG00000010571) #30	LDB1 (ENSSSCG00000010574) #32	PPRC1 (ENSSSCG00000010575) #33	NOLC1 (ENSSSCG00000010576) #34	ELOVL3 (ENSSSCG00000010577) #35	PITX3 (ENSSSCG00000010578) #36	GBF1 (ENSSSCG00000010579) #37
Chacoan peccary	MODERN SPECIES	955	SEC31B (ENSCWAG00000018389) #8	NDUFB8 (ENSCWAG00000018347) #9	HIF1AN (ENSCWAG00000018322) #10	PAX2 (ENSCWAG00000018087) #11	SLF2 (ENSCWAG00000017985) #12	SEMA4G (ENSCWAG00000017948) #13	MRPL43 (ENSCWAG00000017917) #14	TWNK (ENSCWAG00000017826) #15	LZTS2 (ENSCWAG00000017792) #16	ENSCWAG00000017773	PDZD7 (ENSCWAG00000017620) #17	SFXN3 (ENSCWAG00000017574) #18	KAZALD1 (ENSCWAG00000017546) #19	TLX1 (ENSCWAG00000017532) #20	LBX1 (ENSCWAG00000017504) #21	BTRC (ENSCWAG00000017438) #22	POLL (ENSCWAG00000017186) #23	DPCD (ENSCWAG00000017144) #24	FBXW4 (ENSCWAG00000017072) #25	FGF8 (ENSCWAG00000016899) #26	NPM3 (ENSCWAG00000016863) #27	OGA (ENSCWAG00000016757) #28	KCNIP2 (ENSCWAG00000015234) #29	ARMH3 (ENSCWAG00000015108) #30	HPS6 (ENSCWAG00000015092) #31	LDB1 (ENSCWAG00000015033) #32	PPRC1 (ENSCWAG00000014410) #33	ELOVL3 (ENSCWAG00000014311) #35	PITX3 (ENSCWAG00000014269) #36	GBF1 (ENSCWAG00000014118) #37	NFKB2 (ENSCWAG00000014044)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Arabian camel	MODERN SPECIES	2	NDUFB8 (ENSCDRG00005018932) #9	HIF1AN (ENSCDRG00005018905) #10	PAX2 (ENSCDRG00005018578) #11	ENSCDRG00005018552	SLF2 (ENSCDRG00005018469) #12	SEMA4G (ENSCDRG00005018391) #13	MRPL43 (ENSCDRG00005018344) #14	TWNK (ENSCDRG00005018275) #15	LZTS2 (ENSCDRG00005018247) #16	ENSCDRG00005018229 #17	ENSCDRG00005018196 #17	SFXN3 (ENSCDRG00005018164) #18	KAZALD1 (ENSCDRG00005018151) #19	TLX1 (ENSCDRG00005018131) #20	LBX1 (ENSCDRG00005018112) #21	BTRC (ENSCDRG00005017970) #22	POLL (ENSCDRG00005017726) #23	DPCD (ENSCDRG00005017701) #24	FBXW4 (ENSCDRG00005017631) #25	FGF8 (ENSCDRG00005017350) #26	NPM3 (ENSCDRG00005017294) #27	OGA (ENSCDRG00005017195) #28	KCNIP2 (ENSCDRG00005015279) #29	ARMH3 (ENSCDRG00005014932) #30	HPS6 (ENSCDRG00005014897) #31	LDB1 (ENSCDRG00005014831) #32	PPRC1 (ENSCDRG00005014648) #33	NOLC1 (ENSCDRG00005014563) #34	ENSCDRG00005014525	ELOVL3 (ENSCDRG00005014459) #35	PITX3 (ENSCDRG00005014430) #36
Alpaca	MODERN SPECIES	1686																BTRC (ENSVPAG00000003111) #22	POLL (ENSVPAG00000003115) #23	DPCD (ENSVPAG00000003117) #24	ENSVPAG00000003119 #25	NPM3 (ENSVPAG00000003120) #27	OGA (ENSVPAG00000003121) #28	ARMH3 (ENSVPAG00000003122) #30
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35
Dolphin	MODERN SPECIES	582															LBX1 (ENSTTRG00000014899) #21	BTRC (ENSTTRG00000014908) #22	POLL (ENSTTRG00000014923) #23	DPCD (ENSTTRG00000014929) #24	FBXW4 (ENSTTRG00000014933) #25	FGF8 (ENSTTRG00000014939) #26	ENSTTRG00000014942	OGA (ENSTTRG00000014946) #28	KCNIP2 (ENSTTRG00000014952) #29	ARMH3 (ENSTTRG00000014955) #30	ENSTTRG00000014960 #32	PPRC1 (ENSTTRG00000014966) #33	NOLC1 (ENSTTRG00000014974) #34
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000154908	ENSGT00940000160584 #7	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35
Vaquita	MODERN SPECIES	7	NDUFB8 (ENSPSNG00000012559) #9	HIF1AN (ENSPSNG00000012648) #10	PAX2 (ENSPSNG00000012715) #11	SLF2 (ENSPSNG00000013212) #12	SEMA4G (ENSPSNG00000013294) #13	MRPL43 (ENSPSNG00000013369) #14	TWNK (ENSPSNG00000013395) #15	LZTS2 (ENSPSNG00000013492) #16	ENSPSNG00000013544 #17	ENSPSNG00000013625 #17	SFXN3 (ENSPSNG00000013687) #18	KAZALD1 (ENSPSNG00000013727) #19	TLX1 (ENSPSNG00000013783) #20	ENSPSNG00000013837	LBX1 (ENSPSNG00000013867) #21	BTRC (ENSPSNG00000013992) #22	ENSPSNG00000014239	POLL (ENSPSNG00000014325) #23	DPCD (ENSPSNG00000014573) #24	FBXW4 (ENSPSNG00000014655) #25	FGF8 (ENSPSNG00000014763) #26	NPM3 (ENSPSNG00000015111) #27	OGA (ENSPSNG00000015199) #28	KCNIP2 (ENSPSNG00000015521) #29	ARMH3 (ENSPSNG00000016447) #30	HPS6 (ENSPSNG00000016490) #31	LDB1 (ENSPSNG00000016526) #32	PPRC1 (ENSPSNG00000016660) #33	NOLC1 (ENSPSNG00000016800) #34	ELOVL3 (ENSPSNG00000016876) #35	PITX3 (ENSPSNG00000016915) #36
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00950000183143.c.a.p.a.a	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT00960000190004	ENSGT01050000244965.a #35	ENSGT00940000161801 #36
Beluga whale	MODERN SPECIES	65	HIF1AN (ENSDLEG00000016615) #10	PAX2 (ENSDLEG00000016434) #11	SLF2 (ENSDLEG00000016409) #12	SEMA4G (ENSDLEG00000016385) #13	MRPL43 (ENSDLEG00000016373) #14	TWNK (ENSDLEG00000016357) #15	LZTS2 (ENSDLEG00000016343) #16	ENSDLEG00000016332 #17	ENSDLEG00000016313 #17	SFXN3 (ENSDLEG00000016287) #18	KAZALD1 (ENSDLEG00000016276) #19	TLX1 (ENSDLEG00000016266) #20	ENSDLEG00000016263	LBX1 (ENSDLEG00000016256) #21	ENSDLEG00000016243	BTRC (ENSDLEG00000014853) #22	POLL (ENSDLEG00000014662) #23	DPCD (ENSDLEG00000014637) #24	FBXW4 (ENSDLEG00000014542) #25	FGF8 (ENSDLEG00000014445) #26	NPM3 (ENSDLEG00000014430) #27	MGEA5 (ENSDLEG00000012761) #28	KCNIP2 (ENSDLEG00000011996) #29	ARMH3 (ENSDLEG00000011308) #30	HPS6 (ENSDLEG00000011254) #31	LDB1 (ENSDLEG00000011231) #32	PPRC1 (ENSDLEG00000011163) #33	ENSDLEG00000011138	NOLC1 (ENSDLEG00000011092) #34	ENSDLEG00000011076	ELOVL3 (ENSDLEG00000011030) #35
Narwhal	MODERN SPECIES	311	WNT8B (ENSMMNG00015021879) #7	NDUFB8 (ENSMMNG00015021899) #9	HIF1AN (ENSMMNG00015021902) #10	ENSMMNG00015012209	SLF2 (ENSMMNG00015012230) #12	SEMA4G (ENSMMNG00015012260) #13	MRPL43 (ENSMMNG00015012273) #14	TWNK (ENSMMNG00015012283) #15	LZTS2 (ENSMMNG00015012307) #16	PDZD7 (ENSMMNG00015012332) #17	SFXN3 (ENSMMNG00015012374) #18	KAZALD1 (ENSMMNG00015012419) #19	TLX1 (ENSMMNG00015012435) #20	ENSMMNG00015012448	LBX1 (ENSMMNG00015012454) #21	BTRC (ENSMMNG00015012491) #22	ENSMMNG00015012545	POLL (ENSMMNG00015012562) #23	DPCD (ENSMMNG00015012580) #24	FBXW4 (ENSMMNG00015012596) #25	FGF8 (ENSMMNG00015012625) #26	NPM3 (ENSMMNG00015012666) #27	OGA (ENSMMNG00015012693) #28	KCNIP2 (ENSMMNG00015012789) #29	ARMH3 (ENSMMNG00015012888) #30	HPS6 (ENSMMNG00015012924) #31	LDB1 (ENSMMNG00015012934) #32	PPRC1 (ENSMMNG00015012955) #33	NOLC1 (ENSMMNG00015012973) #34	ENSMMNG00015013002	ENSMMNG00015013008
Sperm whale	MODERN SPECIES	12	ENSPCTG00005016969	ENSPCTG00005017035	ENSPCTG00005017133	ERLIN1 (ENSPCTG00005017152)	CHUK (ENSPCTG00005017211)	CWF19L1 (ENSPCTG00005017347)	BLOC1S2 (ENSPCTG00005017426)	SCD (ENSPCTG00005017655)	WNT8B (ENSPCTG00005017722) #7	SEC31B (ENSPCTG00005017805) #8	NDUFB8 (ENSPCTG00005017856) #9	HIF1AN (ENSPCTG00005017931) #10	PAX2 (ENSPCTG00005017976) #11	SLF2 (ENSPCTG00005018174) #12	KAZALD1 (ENSPCTG00005018258) #19	BTRC (ENSPCTG00005018325) #22	ENSPCTG00005018571	POLL (ENSPCTG00005018631) #23	DPCD (ENSPCTG00005018790) #24	FBXW4 (ENSPCTG00005018820) #25	ARMH3 (ENSPCTG00005018935) #30	HPS6 (ENSPCTG00005019039) #31	LDB1 (ENSPCTG00005019052) #32	OGA (ENSPCTG00005019093) #28	NOLC1 (ENSPCTG00005019168) #34	ENSPCTG00005019221	ACTR1A (ENSPCTG00005019239)	MFSD13A (ENSPCTG00005019320)	CUEDC2 (ENSPCTG00005019392)	FBXL15 (ENSPCTG00005019435)	PSD (ENSPCTG00005019477)
Blue whale	MODERN SPECIES	7	SEC31B (ENSBMSG00010020186) #8	ENSBMSG00010020139 #9	HIF1AN (ENSBMSG00010020107) #10	PAX2 (ENSBMSG00010019829) #11	SLF2 (ENSBMSG00010019778) #12	SEMA4G (ENSBMSG00010019680) #13	MRPL43 (ENSBMSG00010019656) #14	TWNK (ENSBMSG00010019580) #15	LZTS2 (ENSBMSG00010019532) #16	PDZD7 (ENSBMSG00010019325) #17	SFXN3 (ENSBMSG00010019238) #18	KAZALD1 (ENSBMSG00010019182) #19	TLX1 (ENSBMSG00010019148) #20	LBX1 (ENSBMSG00010019122) #21	ENSBMSG00010019090	BTRC (ENSBMSG00010018955) #22	POLL (ENSBMSG00010018641) #23	DPCD (ENSBMSG00010018596) #24	FBXW4 (ENSBMSG00010018485) #25	FGF8 (ENSBMSG00010018314) #26	NPM3 (ENSBMSG00010018271) #27	OGA (ENSBMSG00010018215) #28	KCNIP2 (ENSBMSG00010016543) #29	ARMH3 (ENSBMSG00010016376) #30	HPS6 (ENSBMSG00010016356) #31	LDB1 (ENSBMSG00010016310) #32	PPRC1 (ENSBMSG00010016252) #33	ENSBMSG00010016224	NOLC1 (ENSBMSG00010016181) #34	ELOVL3 (ENSBMSG00010016149) #35	PITX3 (ENSBMSG00010016125) #36
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Yarkand deer	MODERN SPECIES	6	WNT8B (ENSCHYG00000007156) #7	SEC31B (ENSCHYG00000007290) #8	ENSCHYG00000008063 #9	HIF1AN (ENSCHYG00000008087) #10	PAX2 (ENSCHYG00000008121) #11	SLF2 (ENSCHYG00000008313) #12	SEMA4G (ENSCHYG00000008501) #13	MRPL43 (ENSCHYG00000008553) #14	TWNK (ENSCHYG00000008578) #15	LZTS2 (ENSCHYG00000008636) #16	PDZD7 (ENSCHYG00000008700) #17	SFXN3 (ENSCHYG00000008801) #18	KAZALD1 (ENSCHYG00000009247) #19	TLX1 (ENSCHYG00000009316) #20	LBX1 (ENSCHYG00000009391) #21	BTRC (ENSCHYG00000009464) #22	POLL (ENSCHYG00000010092) #23	DPCD (ENSCHYG00000010353) #24	FBXW4 (ENSCHYG00000010417) #25	FGF8 (ENSCHYG00000010585) #26	NPM3 (ENSCHYG00000011000) #27	OGA (ENSCHYG00000011095) #28	KCNIP2 (ENSCHYG00000011315) #29	ARMH3 (ENSCHYG00000011524) #30	HPS6 (ENSCHYG00000011978) #31	LDB1 (ENSCHYG00000011992) #32	PPRC1 (ENSCHYG00000012117) #33	NOLC1 (ENSCHYG00000012710) #34	ELOVL3 (ENSCHYG00000012788) #35	PITX3 (ENSCHYG00000012861) #36	GBF1 (ENSCHYG00000012906) #37
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Goat	MODERN SPECIES	18	WNT8B (ENSCHIG00000022296) #7	SEC31B (ENSCHIG00000014510) #8	NDUFB8 (ENSCHIG00000014213) #9	HIF1AN (ENSCHIG00000015131) #10	PAX2 (ENSCHIG00000026895) #11	SLF2 (ENSCHIG00000020908) #12	SEMA4G (ENSCHIG00000017686) #13	MRPL43 (ENSCHIG00000023474) #14	TWNK (ENSCHIG00000010638) #15	LZTS2 (ENSCHIG00000017763) #16	PDZD7 (ENSCHIG00000003600) #17	SFXN3 (ENSCHIG00000007598) #18	KAZALD1 (ENSCHIG00000020364) #19	TLX1 (ENSCHIG00000017143) #20	LBX1 (ENSCHIG00000023740) #21	BTRC (ENSCHIG00000016955) #22	POLL (ENSCHIG00000003400) #23	DPCD (ENSCHIG00000020911) #24	FBXW4 (ENSCHIG00000018380) #25	FGF8 (ENSCHIG00000016976) #26	ENSCHIG00000024055 #27	OGA (ENSCHIG00000012695) #28	KCNIP2 (ENSCHIG00000023969) #29	ARMH3 (ENSCHIG00000021008) #30	HPS6 (ENSCHIG00000002581) #31	ENSCHIG00000016117	LDB1 (ENSCHIG00000012111) #32	PPRC1 (ENSCHIG00000011471) #33	NOLC1 (ENSCHIG00000016755) #34	ELOVL3 (ENSCHIG00000020567) #35	PITX3 (ENSCHIG00000005050) #36
Rambouillet Sheep	MODERN SPECIES	14	WNT8B (ENSOARG00020023882) #7	SEC31B (ENSOARG00020023907) #8	NDUFB8 (ENSOARG00020023960) #9	HIF1AN (ENSOARG00020023988) #10	PAX2 (ENSOARG00020024007) #11	SLF2 (ENSOARG00020024229) #12	SEMA4G (ENSOARG00020024295) #13	MRPL43 (ENSOARG00020024355) #14	TWNK (ENSOARG00020024387) #15	LZTS2 (ENSOARG00020024436) #16	ENSOARG00020024454 #17	SFXN3 (ENSOARG00020024496) #18	KAZALD1 (ENSOARG00020024525) #19	TLX1 (ENSOARG00020024541) #20	LBX1 (ENSOARG00020024551) #21	BTRC (ENSOARG00020024573) #22	POLL (ENSOARG00020024664) #23	DPCD (ENSOARG00020024779) #24	FBXW4 (ENSOARG00020024790) #25	ENSOARG00020024820	FGF8 (ENSOARG00020024835) #26	NPM3 (ENSOARG00020024924) #27	OGA (ENSOARG00020024941) #28	KCNIP2 (ENSOARG00020025029) #29	ARMH3 (ENSOARG00020025366) #30	HPS6 (ENSOARG00020025382) #31	LDB1 (ENSOARG00020025397) #32	PPRC1 (ENSOARG00020025416) #33	NOLC1 (ENSOARG00020025460) #34	ELOVL3 (ENSOARG00020025469) #35	PITX3 (ENSOARG00020025475) #36
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Bos	ANCESTRAL SPECIES	23	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Domestic yak	MODERN SPECIES	17	WNT8B (ENSBGRG00000024358) #7	SEC31B (ENSBGRG00000024463) #8	ENSBGRG00000024877 #9	HIF1AN (ENSBGRG00000024908) #10	ENSBGRG00000024942 #11	SLF2 (ENSBGRG00000025048) #12	SEMA4G (ENSBGRG00000025220) #13	MRPL43 (ENSBGRG00000025253) #14	TWNK (ENSBGRG00000025268) #15	LZTS2 (ENSBGRG00000025304) #16	PDZD7 (ENSBGRG00000025335) #17	SFXN3 (ENSBGRG00000025373) #18	KAZALD1 (ENSBGRG00000025398) #19	TLX1 (ENSBGRG00000025436) #20	LBX1 (ENSBGRG00000025446) #21	BTRC (ENSBGRG00000025472) #22	POLL (ENSBGRG00000025605) #23	DPCD (ENSBGRG00000025670) #24	FBXW4 (ENSBGRG00000025687) #25	FGF8 (ENSBGRG00000025705) #26	NPM3 (ENSBGRG00000025751) #27	OGA (ENSBGRG00000025769) #28	KCNIP2 (ENSBGRG00000025831) #29	ENSBGRG00000026004	ARMH3 (ENSBGRG00000026018) #30	HPS6 (ENSBGRG00000026028) #31	LDB1 (ENSBGRG00000026032) #32	PPRC1 (ENSBGRG00000026069) #33	NOLC1 (ENSBGRG00000026111) #34	ENSBGRG00000026136	ELOVL3 (ENSBGRG00000026140) #35
Wild yak	MODERN SPECIES	124		WNT8B (ENSBMUG00000003465) #7	SEC31B (ENSBMUG00000003449) #8	ENSBMUG00000003406 #9	HIF1AN (ENSBMUG00000003393) #10	PAX2 (ENSBMUG00000003356) #11	SLF2 (ENSBMUG00000003264) #12	SEMA4G (ENSBMUG00000003213) #13	MRPL43 (ENSBMUG00000003186) #14	TWNK (ENSBMUG00000003170) #15	LZTS2 (ENSBMUG00000003163) #16	PDZD7 (ENSBMUG00000003120) #17	SFXN3 (ENSBMUG00000003051) #18	ENSBMUG00000003033 #19	TLX1 (ENSBMUG00000002998) #20	BTRC (ENSBMUG00000002953) #22	POLL (ENSBMUG00000002781) #23	DPCD (ENSBMUG00000002662) #24	FBXW4 (ENSBMUG00000002636) #25	FGF8 (ENSBMUG00000002582) #26	NPM3 (ENSBMUG00000002562) #27	OGA (ENSBMUG00000002507) #28	KCNIP2 (ENSBMUG00000002276) #29	ARMH3 (ENSBMUG00000002100) #30	HPS6 (ENSBMUG00000002004) #31	LDB1 (ENSBMUG00000001990) #32	PPRC1 (ENSBMUG00000001946) #33	NOLC1 (ENSBMUG00000001853) #34	ELOVL3 (ENSBMUG00000001815) #35	PITX3 (ENSBMUG00000001811) #36	GBF1 (ENSBMUG00000001789) #37
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628.m.a.a #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Cow	MODERN SPECIES	18	SEC31B (ENSBTAG00000000090) #8	NDUFB8 (ENSBTAG00000000091) #9	HIF1AN (ENSBTAG00000000092) #10	PAX2 (ENSBTAG00000021566) #11	SLF2 (ENSBTAG00000012077) #12	SEMA4G (ENSBTAG00000018604) #13	MRPL43 (ENSBTAG00000003294) #14	TWNK (ENSBTAG00000003296) #15	LZTS2 (ENSBTAG00000003298) #16	ENSBTAG00000039834 #17	ENSBTAG00000016928 #17	SFXN3 (ENSBTAG00000005015) #18	KAZALD1 (ENSBTAG00000011489) #19	TLX1 (ENSBTAG00000011080) #20	LBX1 (ENSBTAG00000002261) #21	BTRC (ENSBTAG00000007476) #22	POLL (ENSBTAG00000003576) #23	DPCD (ENSBTAG00000003578) #24	FBXW4 (ENSBTAG00000003579) #25	ENSBTAG00000053939	FGF8 (ENSBTAG00000001530) #26	NPM3 (ENSBTAG00000016335) #27	OGA (ENSBTAG00000016336) #28	KCNIP2 (ENSBTAG00000016343) #29	ARMH3 (ENSBTAG00000013120) #30	HPS6 (ENSBTAG00000021942) #31	LDB1 (ENSBTAG00000005780) #32	PPRC1 (ENSBTAG00000007427) #33	NOLC1 (ENSBTAG00000007435) #34	ELOVL3 (ENSBTAG00000015700) #35	PITX3 (ENSBTAG00000015702) #36
Hybrid Bos Indicus	MODERN SPECIES	18	SCD (ENSBIXG00005011225)	WNT8B (ENSBIXG00005011240) #7	SEC31B (ENSBIXG00005001063) #8	ENSBIXG00005011280 #9	HIF1AN (ENSBIXG00005011295) #10	PAX2 (ENSBIXG00005011389) #11	SLF2 (ENSBIXG00005011450) #12	MRPL43 (ENSBIXG00005011491) #14	SEMA4G (ENSBIXG00005011547) #13	LZTS2 (ENSBIXG00005001135) #16	PDZD7 (ENSBIXG00005011644) #17	SFXN3 (ENSBIXG00005011674) #18	KAZALD1 (ENSBIXG00005011702) #19	TLX1 (ENSBIXG00005001152) #20	LBX1 (ENSBIXG00005011727) #21	BTRC (ENSBIXG00005011868) #22	POLL (ENSBIXG00005000418) #23	DPCD (ENSBIXG00005011989) #24	ENSBIXG00005001225	FBXW4 (ENSBIXG00005012014) #25	FGF8 (ENSBIXG00005012077) #26	NPM3 (ENSBIXG00005012095) #27	OGA (ENSBIXG00005001256) #28	KCNIP2 (ENSBIXG00005012451) #29	ARMH3 (ENSBIXG00005012509) #30	HPS6 (ENSBIXG00005000333) #31	LDB1 (ENSBIXG00005012537) #32	PPRC1 (ENSBIXG00005012646) #33	NOLC1 (ENSBIXG00005005482) #34	ELOVL3 (ENSBIXG00005001400) #35	PITX3 (ENSBIXG00005012731) #36
American bison	MODERN SPECIES	3316	WNT8B (ENSBBBG00000021008) #7	SEC31B (ENSBBBG00000007056) #8	ENSBBBG00000021055 #9	HIF1AN (ENSBBBG00000021073) #10	PAX2 (ENSBBBG00000021192) #11	SLF2 (ENSBBBG00000021234) #12	SEMA4G (ENSBBBG00000007106) #13	MRPL43 (ENSBBBG00000021273) #14	TWNK (ENSBBBG00000008401) #15	LZTS2 (ENSBBBG00000005695) #16	PDZD7 (ENSBBBG00000021381) #17	SFXN3 (ENSBBBG00000021411) #18	KAZALD1 (ENSBBBG00000021426) #19	TLX1 (ENSBBBG00000021434) #20	LBX1 (ENSBBBG00000021437) #21	BTRC (ENSBBBG00000021525) #22	POLL (ENSBBBG00000021635) #23	DPCD (ENSBBBG00000021651) #24	FBXW4 (ENSBBBG00000021667) #25	FGF8 (ENSBBBG00000005761) #26	NPM3 (ENSBBBG00000021685) #27	OGA (ENSBBBG00000005781) #28	KCNIP2 (ENSBBBG00000022027) #29	ARMH3 (ENSBBBG00000007684) #30	HPS6 (ENSBBBG00000022074) #31	LDB1 (ENSBBBG00000005829) #32	PPRC1 (ENSBBBG00000007281) #33	NOLC1 (ENSBBBG00000005854) #34	ELOVL3 (ENSBBBG00000022200) #35	PITX3 (ENSBBBG00000022213) #36	GBF1 (ENSBBBG00000022275) #37
Siberian musk deer	MODERN SPECIES	1162	HIF1AN (ENSMMSG00000018273) #10	PAX2 (ENSMMSG00000017916) #11	SLF2 (ENSMMSG00000017739) #12	SEMA4G (ENSMMSG00000017665) #13	MRPL43 (ENSMMSG00000017635) #14	TWNK (ENSMMSG00000017581) #15	LZTS2 (ENSMMSG00000017542) #16	PDZD7 (ENSMMSG00000017297) #17	SFXN3 (ENSMMSG00000017226) #18	KAZALD1 (ENSMMSG00000017194) #19	TLX1 (ENSMMSG00000017162) #20	ENSMMSG00000017131	LBX1 (ENSMMSG00000017109) #21	ENSMMSG00000017086	ENSMMSG00000017075	BTRC (ENSMMSG00000016899) #22	POLL (ENSMMSG00000016722) #23	DPCD (ENSMMSG00000016659) #24	FBXW4 (ENSMMSG00000016591) #25	FGF8 (ENSMMSG00000016398) #26	NPM3 (ENSMMSG00000023905) #27	OGA (ENSMMSG00000023879) #28	KCNIP2 (ENSMMSG00000023762) #29	ARMH3 (ENSMMSG00000023729) #30	HPS6 (ENSMMSG00000023722) #31	LDB1 (ENSMMSG00000023714) #32	PPRC1 (ENSMMSG00000023667) #33	NOLC1 (ENSMMSG00000023644) #34	ELOVL3 (ENSMMSG00000023638) #35	PITX3 (ENSMMSG00000023635) #36	GBF1 (ENSMMSG00000023605) #37
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
leopard	MODERN SPECIES	33	WNT8B (ENSPPRG00000001818) #7	SEC31B (ENSPPRG00000001132) #8	NDUFB8 (ENSPPRG00000000394) #9	HIF1AN (ENSPPRG00000022659) #10	PAX2 (ENSPPRG00000022822) #11	SLF2 (ENSPPRG00000023640) #12	SEMA4G (ENSPPRG00000023921) #13	MRPL43 (ENSPPRG00000024398) #14	TWNK (ENSPPRG00000024792) #15	LZTS2 (ENSPPRG00000024851) #16	PDZD7 (ENSPPRG00000024966) #17	SFXN3 (ENSPPRG00000025064) #18	KAZALD1 (ENSPPRG00000025091) #19	TLX1 (ENSPPRG00000021686) #20	LBX1 (ENSPPRG00000019906) #21	BTRC (ENSPPRG00000019213) #22	POLL (ENSPPRG00000015944) #23	DPCD (ENSPPRG00000014395) #24	FBXW4 (ENSPPRG00000014010) #25	FGF8 (ENSPPRG00000013495) #26	ENSPPRG00000012611 #27	OGA (ENSPPRG00000012421) #28	KCNIP2 (ENSPPRG00000008687) #29	ARMH3 (ENSPPRG00000006816) #30	LDB1 (ENSPPRG00000004903) #32	PPRC1 (ENSPPRG00000004274) #33	NOLC1 (ENSPPRG00000003072) #34	ELOVL3 (ENSPPRG00000000726) #35	PITX3 (ENSPPRG00000000459) #36	GBF1 (ENSPPRG00000022832) #37	NFKB2 (ENSPPRG00000024177)
lion	MODERN SPECIES	11	WNT8B (ENSPLOG00000006038) #7	SEC31B (ENSPLOG00000006003) #8	NDUFB8 (ENSPLOG00000005958) #9	HIF1AN (ENSPLOG00000005929) #10	PAX2 (ENSPLOG00000005810) #11	SLF2 (ENSPLOG00000005756) #12	SEMA4G (ENSPLOG00000005704) #13	ENSPLOG00000005682	TWNK (ENSPLOG00000005651) #15	LZTS2 (ENSPLOG00000005627) #16	ENSPLOG00000005593 #17	SFXN3 (ENSPLOG00000005555) #18	KAZALD1 (ENSPLOG00000005533) #19	TLX1 (ENSPLOG00000005518) #20	LBX1 (ENSPLOG00000005507) #21	BTRC (ENSPLOG00000005315) #22	POLL (ENSPLOG00000005264) #23	DPCD (ENSPLOG00000005244) #24	FBXW4 (ENSPLOG00000005224) #25	FGF8 (ENSPLOG00000005187) #26	NPM3 (ENSPLOG00000005157) #27	OGA (ENSPLOG00000005085) #28	KCNIP2 (ENSPLOG00000004987) #29	ENSPLOG00000019012	ARMH3 (ENSPLOG00000018843) #30	HPS6 (ENSPLOG00000018787) #31	LDB1 (ENSPLOG00000018677) #32	PPRC1 (ENSPLOG00000018611) #33	NOLC1 (ENSPLOG00000018322) #34	ELOVL3 (ENSPLOG00000018268) #35	PITX3 (ENSPLOG00000018227) #36
Tiger	MODERN SPECIES	136	CWF19L1 (ENSPTIG00000009695)	BLOC1S2 (ENSPTIG00000010062)	PKD2L1 (ENSPTIG00000011355)	SCD (ENSPTIG00000012317)	SEC31B (ENSPTIG00000012634) #8	NDUFB8 (ENSPTIG00000013500) #9	HIF1AN (ENSPTIG00000014946) #10	PAX2 (ENSPTIG00000015726) #11	SLF2 (ENSPTIG00000017770) #12	SEMA4G (ENSPTIG00000018207) #13	MRPL43 (ENSPTIG00000019483) #14	TWNK (ENSPTIG00000019662) #15	ENSPTIG00000019929 #17	SFXN3 (ENSPTIG00000020192) #18	LBX1 (ENSPTIG00000020484) #21	BTRC (ENSPTIG00000021271) #22	POLL (ENSPTIG00000021663) #23	DPCD (ENSPTIG00000000972) #24	FBXW4 (ENSPTIG00000004575) #25	NPM3 (ENSPTIG00000005390) #27	OGA (ENSPTIG00000005989) #28	KCNIP2 (ENSPTIG00000009209) #29	ARMH3 (ENSPTIG00000010893) #30	LDB1 (ENSPTIG00000012571) #32	PPRC1 (ENSPTIG00000013709) #33	NOLC1 (ENSPTIG00000014862) #34	ELOVL3 (ENSPTIG00000016855) #35	ENSPTIG00000017198 #36	GBF1 (ENSPTIG00000017555) #37	ENSPTIG00000017841	PSD (ENSPTIG00000018116)
Cat	MODERN SPECIES	242	WNT8B (ENSFCAG00000006451) #7	SEC31B (ENSFCAG00000006452) #8	NDUFB8 (ENSFCAG00000041098) #9	HIF1AN (ENSFCAG00000024883) #10	PAX2 (ENSFCAG00000011602) #11	SLF2 (ENSFCAG00000030202) #12	SEMA4G (ENSFCAG00000015692) #13	ENSFCAG00000015693	TWNK (ENSFCAG00000015694) #15	LZTS2 (ENSFCAG00000015695) #16	PDZD7 (ENSFCAG00000015696) #17	SFXN3 (ENSFCAG00000015697) #18	KAZALD1 (ENSFCAG00000038365) #19	TLX1 (ENSFCAG00000046742) #20	LBX1 (ENSFCAG00000034106) #21	BTRC (ENSFCAG00000015700) #22	POLL (ENSFCAG00000015701) #23	DPCD (ENSFCAG00000037081) #24	FBXW4 (ENSFCAG00000015703) #25	FGF8 (ENSFCAG00000007177) #26	NPM3 (ENSFCAG00000007178) #27	OGA (ENSFCAG00000007179) #28	KCNIP2 (ENSFCAG00000013243) #29	ARMH3 (ENSFCAG00000013244) #30	HPS6 (ENSFCAG00000028998) #31	LDB1 (ENSFCAG00000001236) #32	PPRC1 (ENSFCAG00000001238) #33	GBF1 (ENSFCAG00000001241) #37	PITX3 (ENSFCAG00000026758) #36	NFKB2 (ENSFCAG00000001242)	PSD (ENSFCAG00000001243)
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000160584 #7	ENSGT00390000003175.a.a.b #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000160584 #7	ENSGT00390000003175.a.a.b #8	ENSGT00390000000628.p #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000160584 #7	ENSGT00390000003175.a.a.b #8	ENSGT00390000000628.p #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37	ENSGT00940000160968
Polar bear	MODERN SPECIES	92	CWF19L1 (ENSUMAG00000022786)	BLOC1S2 (ENSUMAG00000022792)	PKD2L1 (ENSUMAG00000022795)	SCD (ENSUMAG00000022802)	SEC31B (ENSUMAG00000022806) #8	NDUFB8 (ENSUMAG00000022810) #9	HIF1AN (ENSUMAG00000022811) #10	PAX2 (ENSUMAG00000022813) #11	SLF2 (ENSUMAG00000022840) #12	ENSUMAG00000022956 #13	MRPL43 (ENSUMAG00000022958) #14	TWNK (ENSUMAG00000022959) #15	ENSUMAG00000022963 #17	ENSUMAG00000022970 #17	SFXN3 (ENSUMAG00000022989) #18	BTRC (ENSUMAG00000023002) #22	POLL (ENSUMAG00000023008) #23	DPCD (ENSUMAG00000023012) #24	FBXW4 (ENSUMAG00000023013) #25	NPM3 (ENSUMAG00000023016) #27	OGA (ENSUMAG00000023018) #28	KCNIP2 (ENSUMAG00000023021) #29	ARMH3 (ENSUMAG00000023027) #30	ENSUMAG00000023033	HPS6 (ENSUMAG00000023035) #31	LDB1 (ENSUMAG00000023036) #32	PPRC1 (ENSUMAG00000023041) #33	NOLC1 (ENSUMAG00000023063) #34	ELOVL3 (ENSUMAG00000023071) #35	GBF1 (ENSUMAG00000023098) #37	NFKB2 (ENSUMAG00000023323)
American black bear	MODERN SPECIES	170													KAZALD1 (ENSUAMG00000024080) #19	TLX1 (ENSUAMG00000024078) #20	LBX1 (ENSUAMG00000024077) #21	BTRC (ENSUAMG00000024076) #22	POLL (ENSUAMG00000024075) #23	DPCD (ENSUAMG00000024074) #24	FBXW4 (ENSUAMG00000024073) #25	NPM3 (ENSUAMG00000024072) #27	OGA (ENSUAMG00000023914) #28	ENSUAMG00000023912 #30
Giant Panda	MODERN SPECIES	16	SCD (ENSAMEG00000006735)	WNT8B (ENSAMEG00000030678) #7	HIF1AN (ENSAMEG00000006629) #10	NDUFB8 (ENSAMEG00000006651) #9	PAX2 (ENSAMEG00000017523) #11	SLF2 (ENSAMEG00000017539) #12	SEMA4G (ENSAMEG00000017555) #13	ENSAMEG00000026650	TWNK (ENSAMEG00000017575) #15	LZTS2 (ENSAMEG00000017581) #16	PDZD7 (ENSAMEG00000017588) #17	SFXN3 (ENSAMEG00000017589) #18	KAZALD1 (ENSAMEG00000017599) #19	TLX1 (ENSAMEG00000017604) #20	LBX1 (ENSAMEG00000025161) #21	BTRC (ENSAMEG00000017610) #22	POLL (ENSAMEG00000017616) #23	DPCD (ENSAMEG00000017626) #24	FBXW4 (ENSAMEG00000017630) #25	FGF8 (ENSAMEG00000017635) #26	ENSAMEG00000017639 #27	OGA (ENSAMEG00000017642) #28	KCNIP2 (ENSAMEG00000017648) #29	ARMH3 (ENSAMEG00000017666) #30	HPS6 (ENSAMEG00000020223) #31	LDB1 (ENSAMEG00000017674) #32	PPRC1 (ENSAMEG00000017685) #33	NOLC1 (ENSAMEG00000017687) #34	ELOVL3 (ENSAMEG00000026429) #35	PITX3 (ENSAMEG00000017698) #36	GBF1 (ENSAMEG00000017700) #37
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00940000160584 #7	ENSGT00390000003175.a.a.b #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
American mink	DUPLICATION
American mink	MODERN SPECIES	25	SEC31B (ENSNVIG00000018876) #8	NDUFB8 (ENSNVIG00000018849) #9	HIF1AN (ENSNVIG00000018842) #10	PAX2 (ENSNVIG00000018769) #11	SLF2 (ENSNVIG00000018711) #12	SEMA4G (ENSNVIG00000018660) #13	B1AL05 (ENSNVIG00000018655) #14	TWNK (ENSNVIG00000018632) #15	LZTS2 (ENSNVIG00000018615) #16	ENSNVIG00000018594 #17	SFXN3 (ENSNVIG00000018587) #18	KAZALD1 (ENSNVIG00000018579) #19	TLX1 (ENSNVIG00000018572) #20	ENSNVIG00000018563	LBX1 (ENSNVIG00000018557) #21	ENSNVIG00000018498 #22	POLL (ENSNVIG00000018469) #23	DPCD (ENSNVIG00000018457) #24	FBXW4 (ENSNVIG00000018442) #25	FGF8 (ENSNVIG00000018394) #26	NPM3 (ENSNVIG00000018364) #27	OGA (ENSNVIG00000018264) #28	KCIP2 (ENSNVIG00000018034) #29	ENSNVIG00000018006	CJ076 (ENSNVIG00000017939) #30	HPS6 (ENSNVIG00000017937) #31	LDB1 (ENSNVIG00000017913) #32	PPRC1 (ENSNVIG00000017896) #33	NOLC1 (ENSNVIG00000017826) #34	ELOV3 (ENSNVIG00000017791) #35	PITX3 (ENSNVIG00000017782) #36
American mink	MODERN SPECIES	128													EPHA5 (ENSNVIG00000019023)	TECRL (ENSNVIG00000018974)	ENSNVIG00000018961	ENSNVIG00000018955 #22	ADGRL3 (ENSNVIG00000017945)
Ferret	MODERN SPECIES	187	SEC31B (ENSMPUG00000016960) #8	NDUFB8 (ENSMPUG00000016959) #9	ENSMPUG00000016956 #10	PAX2 (ENSMPUG00000016955) #11	ENSMPUG00000016954	SLF2 (ENSMPUG00000016953) #12	SEMA4G (ENSMPUG00000016946) #13	MRPL43 (ENSMPUG00000016942) #14	TWNK (ENSMPUG00000016941) #15	LZTS2 (ENSMPUG00000016937) #16	PDZD7 (ENSMPUG00000016931) #17	SFXN3 (ENSMPUG00000016930) #18	KAZALD1 (ENSMPUG00000016929) #19	TLX1 (ENSMPUG00000016927) #20	LBX1 (ENSMPUG00000016926) #21	BTRC (ENSMPUG00000016923) #22	POLL (ENSMPUG00000016920) #23	DPCD (ENSMPUG00000016919) #24	FBXW4 (ENSMPUG00000016906) #25	FGF8 (ENSMPUG00000016897) #26	NPM3 (ENSMPUG00000016894) #27	OGA (ENSMPUG00000016893) #28	KCNIP2 (ENSMPUG00000016892) #29	ARMH3 (ENSMPUG00000016890) #30	HPS6 (ENSMPUG00000020133) #31	LDB1 (ENSMPUG00000016889) #32	PPRC1 (ENSMPUG00000016888) #33	NOLC1 (ENSMPUG00000016887) #34	ELOVL3 (ENSMPUG00000016886) #35	PITX3 (ENSMPUG00000016885) #36	GBF1 (ENSMPUG00000016883) #37
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Dog	MODERN SPECIES	20	WNT8B (ENSCAFG00845016786) #7	SEC31B (ENSCAFG00845017184) #8	NDUFB8 (ENSCAFG00845018078) #9	HIF1AN (ENSCAFG00845018163) #10	PAX2 (ENSCAFG00845018449) #11	SLF2 (ENSCAFG00845018854) #12	SEMA4G (ENSCAFG00845019254) #13	MRPL43 (ENSCAFG00845019486) #14	TWNK (ENSCAFG00845019518) #15	LZTS2 (ENSCAFG00845019571) #16	PDZD7 (ENSCAFG00845019707) #17	SFXN3 (ENSCAFG00845020173) #18	KAZALD1 (ENSCAFG00845020241) #19	TLX1 (ENSCAFG00845020381) #20	LBX1 (ENSCAFG00845020416) #21	BTRC (ENSCAFG00845020497) #22	POLL (ENSCAFG00845020759) #23	DPCD (ENSCAFG00845020872) #24	FBXW4 (ENSCAFG00845020929) #25	FGF8 (ENSCAFG00845021086) #26	OGA (ENSCAFG00845021211) #27	OGA (ENSCAFG00845021307) #28	KCNIP2 (ENSCAFG00845021527) #29	ARMH3 (ENSCAFG00845022019) #30	HPS6 (ENSCAFG00845022716) #31	LDB1 (ENSCAFG00845022765) #32	PPRC1 (ENSCAFG00845022994) #33	NOLC1 (ENSCAFG00845023156) #34	ELOVL3 (ENSCAFG00845023260) #35	PITX3 (ENSCAFG00845023314) #36	GBF1 (ENSCAFG00845023390) #37
Dingo	MODERN SPECIES	165	SEC31B (ENSCAFG00020008380) #8	NDUFB8 (ENSCAFG00020008602) #9	HIF1AN (ENSCAFG00020008624) #10	ENSCAFG00020008648 #11	SLF2 (ENSCAFG00020008672) #12	SEMA4G (ENSCAFG00020009043) #13	MRPL43 (ENSCAFG00020009048) #14	TWNK (ENSCAFG00020009050) #15	LZTS2 (ENSCAFG00020009057) #16	ENSCAFG00020009061 #17	ENSCAFG00020009067 #17	SFXN3 (ENSCAFG00020009123) #18	KAZALD1 (ENSCAFG00020009128) #19	TLX1 (ENSCAFG00020009130) #20	LBX1 (ENSCAFG00020009135) #21	BTRC (ENSCAFG00020009146) #22	POLL (ENSCAFG00020009154) #23	DPCD (ENSCAFG00020009157) #24	FBXW4 (ENSCAFG00020009166) #25	FGF8 (ENSCAFG00020009181) #26	NPM3 (ENSCAFG00020009185) #27	OGA (ENSCAFG00020009186) #28	KCNIP2 (ENSCAFG00020009192) #29	ARMH3 (ENSCAFG00020009246) #30	LDB1 (ENSCAFG00020010016) #32	PPRC1 (ENSCAFG00020010030) #33	NOLC1 (ENSCAFG00020010146) #34	ELOVL3 (ENSCAFG00020010148) #35	PITX3 (ENSCAFG00020010150) #36	ENSCAFG00020010157 #37	ENSCAFG00020010159 #37
Red fox	MODERN SPECIES		WNT8B (ENSVVUG00000024928) #7	NDUFB8 (ENSVVUG00000024929) #9	HIF1AN (ENSVVUG00000024930) #10	ENSVVUG00000024932 #11	ENSVVUG00000000159	SLF2 (ENSVVUG00000000268) #12	SEMA4G (ENSVVUG00000000341) #13	MRPL43 (ENSVVUG00000000360) #14	TWNK (ENSVVUG00000000429) #15	LZTS2 (ENSVVUG00000000572) #16	PDZD7 (ENSVVUG00000000597) #17	SFXN3 (ENSVVUG00000000615) #18	KAZALD1 (ENSVVUG00000000631) #19	TLX1 (ENSVVUG00000000649) #20	LBX1 (ENSVVUG00000000689) #21	BTRC (ENSVVUG00000000703) #22	POLL (ENSVVUG00000000738) #23	DPCD (ENSVVUG00000000749) #24	FBXW4 (ENSVVUG00000000770) #25	FGF8 (ENSVVUG00000000784) #26	NPM3 (ENSVVUG00000000945) #27	OGA (ENSVVUG00000000965) #28	KCNIP2 (ENSVVUG00000001064) #29	ARMH3 (ENSVVUG00000002381) #30	ENSVVUG00000002549	PPRC1 (ENSVVUG00000002566) #33	LDB1 (ENSVVUG00000002609) #32	NOLC1 (ENSVVUG00000002661) #34	ELOVL3 (ENSVVUG00000002813) #35	PITX3 (ENSVVUG00000002824) #36	GBF1 (ENSVVUG00000002840) #37
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Greater horseshoe bat	MODERN SPECIES	7	HIF1AN (ENSRFEG00010007855) #10	PAX2 (ENSRFEG00010007445) #11	SLF2 (ENSRFEG00010007066) #12	SEMA4G (ENSRFEG00010007019) #13	MRPL43 (ENSRFEG00010006991) #14	TWNK (ENSRFEG00010006903) #15	LZTS2 (ENSRFEG00010006867) #16	ENSRFEG00010006849	PDZD7 (ENSRFEG00010006815) #17	SFXN3 (ENSRFEG00010006745) #18	KAZALD1 (ENSRFEG00010006705) #19	TLX1 (ENSRFEG00010006681) #20	ENSRFEG00010006650	LBX1 (ENSRFEG00010006637) #21	ENSRFEG00010006625	BTRC (ENSRFEG00010006446) #22	POLL (ENSRFEG00010006332) #23	DPCD (ENSRFEG00010006295) #24	FBXW4 (ENSRFEG00010006255) #25	FGF8 (ENSRFEG00010006132) #26	NPM3 (ENSRFEG00010006055) #27	OGA (ENSRFEG00010005973) #28	KCNIP2 (ENSRFEG00010005717) #29	ENSRFEG00010005540	ARMH3 (ENSRFEG00010005361) #30	HPS6 (ENSRFEG00010018300) #31	LDB1 (ENSRFEG00010018232) #32	PPRC1 (ENSRFEG00010018145) #33	NOLC1 (ENSRFEG00010018127) #34	ELOVL3 (ENSRFEG00010018094) #35	PITX3 (ENSRFEG00010018052) #36
Microbat	MODERN SPECIES	1099																BTRC (ENSMLUG00000004932) #22	POLL (ENSMLUG00000004944) #23	DPCD (ENSMLUG00000004947) #24	FBXW4 (ENSMLUG00000004952) #25	FGF8 (ENSMLUG00000004959) #26	NPM3 (ENSMLUG00000004961) #27	OGA (ENSMLUG00000004970) #28	KCNIP2 (ENSMLUG00000004987) #29	ARMH3 (ENSMLUG00000004996) #30	LDB1 (ENSMLUG00000009237) #32	PPRC1 (ENSMLUG00000006217) #33	NOLC1 (ENSMLUG00000001726) #34	ELOVL3 (ENSMLUG00000028990) #35	PITX3 (ENSMLUG00000023193) #36	ENSMLUG00000028577	GBF1 (ENSMLUG00000006247) #37
Megabat	MODERN SPECIES	2006																BTRC (ENSPVAG00000006474) #22	POLL (ENSPVAG00000006478) #23	DPCD (ENSPVAG00000006479) #24	FBXW4 (ENSPVAG00000006480) #25
Equus	ANCESTRAL SPECIES	9	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a.c #35	ENSGT00940000161801 #36	ENSGT00940000156925.k #37
Donkey	MODERN SPECIES	11	SEC31B (ENSEASG00005008976) #8	NDUFB8 (ENSEASG00005026217) #9	HIF1AN (ENSEASG00005008969) #10	PAX2 (ENSEASG00005008965) #11	SLF2 (ENSEASG00005008951) #12	SEMA4G (ENSEASG00005008933) #13	ENSEASG00005030511	MRPL43 (ENSEASG00005008925) #14	TWNK (ENSEASG00005008922) #15	LZTS2 (ENSEASG00005008920) #16	PDZD7 (ENSEASG00005038524) #17	SFXN3 (ENSEASG00005008915) #18	KAZALD1 (ENSEASG00005008906) #19	TLX1 (ENSEASG00005008902) #20	LBX1 (ENSEASG00005034916) #21	BTRC (ENSEASG00005008887) #22	POLL (ENSEASG00005008879) #23	DPCD (ENSEASG00005008874) #24	FBXW4 (ENSEASG00005008860) #25	FGF8 (ENSEASG00005008843) #26	NPM3 (ENSEASG00005008834) #27	OGA (ENSEASG00005008004) #28	KCNIP2 (ENSEASG00005007921) #29	ARMH3 (ENSEASG00005007687) #30	HPS6 (ENSEASG00005033362) #31	LDB1 (ENSEASG00005007592) #32	PPRC1 (ENSEASG00005007583) #33	NOLC1 (ENSEASG00005007519) #34	ENSEASG00005010383 #35	ENSEASG00005034292 #36	ENSEASG00005037516 #35
Horse	MODERN SPECIES		SCD (ENSECAG00000014658)	WNT8B (ENSECAG00000009521) #7	SEC31B (ENSECAG00000017210) #8	HIF1AN (ENSECAG00000009178) #10	PAX2 (ENSECAG00000021123) #11	SLF2 (ENSECAG00000011200) #12	SEMA4G (ENSECAG00000022499) #13	MRPL43 (ENSECAG00000038363) #14	TWNK (ENSECAG00000017734) #15	LZTS2 (ENSECAG00000013288) #16	PDZD7 (ENSECAG00000012183) #17	SFXN3 (ENSECAG00000019285) #18	KAZALD1 (ENSECAG00000013608) #19	TLX1 (ENSECAG00000013342) #20	LBX1 (ENSECAG00000032593) #21	BTRC (ENSECAG00000022888) #22	POLL (ENSECAG00000015282) #23	DPCD (ENSECAG00000009848) #24	FBXW4 (ENSECAG00000020477) #25	FGF8 (ENSECAG00000037372) #26	NPM3 (ENSECAG00000007524) #27	OGA (ENSECAG00000018731) #28	ARMH3 (ENSECAG00000020347) #30	HPS6 (ENSECAG00000004595) #31	LDB1 (ENSECAG00000012948) #32	PPRC1 (ENSECAG00000009482) #33	NOLC1 (ENSECAG00000052236) #34	ELOVL3 (ENSECAG00000023578) #35	PITX3 (ENSECAG00000022294) #36	ENSECAG00000047204 #37	GBF1 (ENSECAG00000023593) #37
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000160584 #7	ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Elephant	MODERN SPECIES	3	NDUFB8 (ENSLAFG00000016608) #9	HIF1AN (ENSLAFG00000016613) #10	PAX2 (ENSLAFG00000002388) #11	SLF2 (ENSLAFG00000005877) #12	ENSLAFG00000005967 #13	MRPL43 (ENSLAFG00000028961) #14	TWNK (ENSLAFG00000015859) #15	LZTS2 (ENSLAFG00000009975) #16	ENSLAFG00000032509 #17	ENSLAFG00000026596 #17	SFXN3 (ENSLAFG00000012767) #18	KAZALD1 (ENSLAFG00000004171) #19	ENSLAFG00000030369	TLX1 (ENSLAFG00000004179) #20	LBX1 (ENSLAFG00000012214) #21	BTRC (ENSLAFG00000017122) #22	POLL (ENSLAFG00000009472) #23	DPCD (ENSLAFG00000009478) #24	FBXW4 (ENSLAFG00000009480) #25	FGF8 (ENSLAFG00000028373) #26	NPM3 (ENSLAFG00000023022) #27	OGA (ENSLAFG00000016050) #28	KCNIP2 (ENSLAFG00000016066) #29	ARMH3 (ENSLAFG00000016076) #30	HPS6 (ENSLAFG00000026941) #31	LDB1 (ENSLAFG00000023028) #32	PPRC1 (ENSLAFG00000014232) #33	NOLC1 (ENSLAFG00000014245) #34	ELOVL3 (ENSLAFG00000006785) #35	PITX3 (ENSLAFG00000006787) #36	GBF1 (ENSLAFG00000006789) #37
Hyrax	MODERN SPECIES	4971																BTRC (ENSPCAG00000004714) #22	POLL (ENSPCAG00000004785) #23	DPCD (ENSPCAG00000004838) #24	FBXW4 (ENSPCAG00000004870) #25
Tenrec	MODERN SPECIES	6278																BTRC (ENSETEG00000001031) #22
Xenarthra	ANCESTRAL SPECIES	1135																ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25
Armadillo	MODERN SPECIES	1689											TLX1 (ENSDNOG00000039087) #20	ENSDNOG00000004057	LBX1 (ENSDNOG00000032737) #21	ENSDNOG00000035478	ENSDNOG00000017923	BTRC (ENSDNOG00000019257) #22	POLL (ENSDNOG00000037866) #23	DPCD (ENSDNOG00000042220) #24	FBXW4 (ENSDNOG00000039812) #25
Marsupialia	ANCESTRAL SPECIES		ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00390000003175.a.a #8	ENSGT00390000000628 #9	ENSGT00940000157409 #10	ENSGT00940000157412.b #11	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a.k #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000159322	ENSGT00510000047951	ENSGT00530000063787.A	ENSGT00940000154903	ENSGT00940000161316	ENSGT00940000172454	ENSGT00940000156835	ENSGT00950000183039.B.b.b	ENSGT00940000158048	ENSGT00940000160813	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a.k #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000159322	ENSGT00510000047951	ENSGT00530000063787.A	ENSGT00940000154903	ENSGT00940000161316	ENSGT00940000172454	ENSGT00940000156835	ENSGT00950000183039.B.b.b	ENSGT00940000158048	ENSGT00940000160813	ENSGT00990000203892	ENSGT01030000234641.b.a.b.a.a.k #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00730000111092 #34	ENSGT01050000244965.a #35	ENSGT00940000161801 #36	ENSGT00940000156925 #37
Common wonbat	MODERN SPECIES	581	ZSCAN2 (ENSVURG00010003426)	SEC31B (ENSVURG00010003319) #8	NDUFB8 (ENSVURG00010003291) #9	HIF1AN (ENSVURG00010003265) #10	ENSVURG00010003240	PAX2 (ENSVURG00010003166) #11	ENSVURG00010003115 #12	SEMA4G (ENSVURG00010003048) #13	MRPL43 (ENSVURG00010003032) #14	TWNK (ENSVURG00010003014) #15	LZTS2 (ENSVURG00010002997) #16	ENSVURG00010002939 #17	KAZALD1 (ENSVURG00010002921) #19	TLX1 (ENSVURG00010002839) #20	LBX1 (ENSVURG00010002823) #21	BTRC (ENSVURG00010002745) #22	POLL (ENSVURG00010002645) #23	DPCD (ENSVURG00010002630) #24	ENSVURG00010002614 #25	FGF8 (ENSVURG00010002548) #26	NPM3 (ENSVURG00010002534) #27	OGA (ENSVURG00010002511) #28	KCNIP2 (ENSVURG00010002189) #29	ARMH3 (ENSVURG00010002048) #30	HPS6 (ENSVURG00010002006) #31	LDB1 (ENSVURG00010001956) #32	ENSVURG00010001928 #33	NOLC1 (ENSVURG00010001912) #34	ELOVL3 (ENSVURG00010001812) #35	PITX3 (ENSVURG00010001798) #36	GBF1 (ENSVURG00010001734) #37
koala	MODERN SPECIES	6	SEC31B (ENSPCIG00000001002) #8	NDUFB8 (ENSPCIG00000001035) #9	HIF1AN (ENSPCIG00000001045) #10	PAX2 (ENSPCIG00000001066) #11	ENSPCIG00000001129 #12	SEMA4G (ENSPCIG00000002663) #13	MRPL43 (ENSPCIG00000031987) #14	TWNK (ENSPCIG00000002680) #15	LZTS2 (ENSPCIG00000002692) #16	PDZD7 (ENSPCIG00000002702) #17	ENSPCIG00000002730	ENSPCIG00000002751 #18	KAZALD1 (ENSPCIG00000003284) #19	TLX1 (ENSPCIG00000031947) #20	LBX1 (ENSPCIG00000012981) #21	BTRC (ENSPCIG00000029037) #22	POLL (ENSPCIG00000029031) #23	DPCD (ENSPCIG00000029028) #24	FBXW4 (ENSPCIG00000029029) #25	FGF8 (ENSPCIG00000009616) #26	OGA (ENSPCIG00000009619) #28	KCNIP2 (ENSPCIG00000029025) #29	ARMH3 (ENSPCIG00000029021) #30	HPS6 (ENSPCIG00000029018) #31	LDB1 (ENSPCIG00000029016) #32	ENSPCIG00000029013 #33	NOLC1 (ENSPCIG00000029012) #34	ELOVL3 (ENSPCIG00000029010) #35	PITX3 (ENSPCIG00000029009) #36	GBF1 (ENSPCIG00000029004) #37	NFKB2 (ENSPCIG00000028999)
Wallaby	MODERN SPECIES	7319																BTRC (ENSMEUG00000013579) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000028660	ENSSHAG00000015504	ENSSHAG00000015424 #8	ENSSHAG00000015389 #9	HIF1AN (ENSSHAG00000026157) #10	PAX2 (ENSSHAG00000014328) #11	ENSSHAG00000001085 #12	SEMA4G (ENSSHAG00000024320) #13	MRPL43 (ENSSHAG00000027764) #14	LZTS2 (ENSSHAG00000013716) #16	PDZD7 (ENSSHAG00000013654) #17	SFXN3 (ENSSHAG00000025221) #18	KAZALD1 (ENSSHAG00000031990) #19	TLX1 (ENSSHAG00000026892) #20	LBX1 (ENSSHAG00000012692) #21	BTRC (ENSSHAG00000010653) #22	POLL (ENSSHAG00000010289) #23	DPCD (ENSSHAG00000025520) #24	FBXW4 (ENSSHAG00000009269) #25	FGF8 (ENSSHAG00000008652) #26	NPM3 (ENSSHAG00000008567) #27	OGA (ENSSHAG00000008257) #28	KCNIP2 (ENSSHAG00000026676) #29	ARMH3 (ENSSHAG00000005390) #30	HPS6 (ENSSHAG00000020530) #31	LDB1 (ENSSHAG00000004146) #32	ENSSHAG00000003350 #33	NOLC1 (ENSSHAG00000002222) #34	ELOVL3 (ENSSHAG00000018892) #35	PITX3 (ENSSHAG00000027003) #36	GBF1 (ENSSHAG00000018856) #37
Opossum	MODERN SPECIES		PAX2 (ENSMODG00000019353) #11	ENSMODG00000041434	ENSMODG00000012013 #12	SEMA4G (ENSMODG00000011993) #13	MRPL43 (ENSMODG00000011975) #14	TWNK (ENSMODG00000011966) #15	LZTS2 (ENSMODG00000011955) #16	ENSMODG00000011937 #17	ENSMODG00000045652 #17	SFXN3 (ENSMODG00000011922) #18	KAZALD1 (ENSMODG00000011907) #19	TLX1 (ENSMODG00000011900) #20	LBX1 (ENSMODG00000044699) #21	ENSMODG00000046533	ENSMODG00000027979	BTRC (ENSMODG00000011788) #22	POLL (ENSMODG00000011757) #23	DPCD (ENSMODG00000011742) #24	FBXW4 (ENSMODG00000011732) #25	FGF8 (ENSMODG00000011718) #26	NPM3 (ENSMODG00000011689) #27	OGA (ENSMODG00000011681) #28	KCNIP2 (ENSMODG00000011638) #29	ENSMODG00000019596	ARMH3 (ENSMODG00000011512) #30	HPS6 (ENSMODG00000049767) #31	LDB1 (ENSMODG00000011500) #32	ENSMODG00000011467 #33	NOLC1 (ENSMODG00000011434) #34	PITX3 (ENSMODG00000045989) #36	ENSMODG00000011378 #35
Platypus	MODERN SPECIES	7	NDUFB8 (ENSOANG00000045128) #9	HIF1AN (ENSOANG00000008340) #10	PAX2 (ENSOANG00000013304) #11	ENSOANG00000007329 #12	SEMA4G (ENSOANG00000007328) #13	ENSOANG00000042676	ENSOANG00000007326 #15	ENSOANG00000007325 #15	ENSOANG00000042089 #15	LZTS2 (ENSOANG00000046553) #16	PDZD7 (ENSOANG00000007308) #17	SFXN3 (ENSOANG00000007319) #18	KAZALD1 (ENSOANG00000047060) #19	TLX1 (ENSOANG00000007318) #20	LBX1 (ENSOANG00000044340) #21	BTRC (ENSOANG00000007316) #22	POLL (ENSOANG00000007315) #23	DPCD (ENSOANG00000045090) #24	FBXW4 (ENSOANG00000007313) #25	FGF8 (ENSOANG00000048473) #26	NPM3 (ENSOANG00000039490) #27	OGA (ENSOANG00000004474) #28	KCNIP2 (ENSOANG00000039579) #29	ARMH3 (ENSOANG00000007830) #30	LDB1 (ENSOANG00000007827) #32	ENSOANG00000007826 #33	NOLC1 (ENSOANG00000007824) #34	ELOVL3 (ENSOANG00000007823) #35	PITX3 (ENSOANG00000039250) #36	GBF1 (ENSOANG00000007818) #37	NFKB2 (ENSOANG00000006254)
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000157322.a
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000155737.b	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000154965.A
painted turtle	MODERN SPECIES	2388	SUFU (ENSCPBG00000002443)	ACTR1A (ENSCPBG00000003255)	MFSD13A (ENSCPBG00000003273)	SLF2 (ENSCPBG00000003306) #12	SEMA4G (ENSCPBG00000003347) #13	MRPL43 (ENSCPBG00000003402) #14	TWNK (ENSCPBG00000003411) #15	LZTS2 (ENSCPBG00000003427) #16	ENSCPBG00000003450 #17	ENSCPBG00000003469 #17	ENSCPBG00000003492	SFXN3 (ENSCPBG00000003501) #18	KAZALD1 (ENSCPBG00000003520) #19	TLX1 (ENSCPBG00000003532) #20	LBX1 (ENSCPBG00000003542) #21	BTRC (ENSCPBG00000003583) #22	ENSCPBG00000003715	POLL (ENSCPBG00000003750) #23	DPCD (ENSCPBG00000003764) #24	FBXW4 (ENSCPBG00000003783) #25	FGF8 (ENSCPBG00000003804) #26	NPM3 (ENSCPBG00000003817) #27	OGA (ENSCPBG00000003826) #28	KCNIP2 (ENSCPBG00000003838) #29	ARMH3 (ENSCPBG00000003975) #30	HPS6 (ENSCPBG00000005375) #31	ENSCPBG00000005394	LDB1 (ENSCPBG00000005401) #32	PPRC1 (ENSCPBG00000005408) #33	ENSCPBG00000005413	LCOR (ENSCPBG00000005416)
Three-toed box turtle	MODERN SPECIES	39	TRIM8 (ENSTMTG00000003124)	SUFU (ENSTMTG00000003020)	ACTR1A (ENSTMTG00000002990)	MFSD13A (ENSTMTG00000002979)	SLF2 (ENSTMTG00000002972) #12	SEMA4G (ENSTMTG00000002965) #13	MRPL43 (ENSTMTG00000002961) #14	TWNK (ENSTMTG00000002956) #15	LZTS2 (ENSTMTG00000002949) #16	ENSTMTG00000002944 ##17	PDZD7 (ENSTMTG00000002937) #17	SFXN3 (ENSTMTG00000002927) #18	KAZALD1 (ENSTMTG00000002879) #19	TLX1 (ENSTMTG00000002865) #20	LBX1 (ENSTMTG00000002859) #21	BTRC (ENSTMTG00000002831) #22	ENSTMTG00000002734	POLL (ENSTMTG00000002707) #23	DPCD (ENSTMTG00000002704) #24	FBXW4 (ENSTMTG00000002700) #25	FGF8 (ENSTMTG00000002693) #26	NPM3 (ENSTMTG00000002688) #27	OGA (ENSTMTG00000002679) #28	ARMH3 (ENSTMTG00000002641) #30	HPS6 (ENSTMTG00000002625) #31	LDB1 (ENSTMTG00000002621) #32	PPRC1 (ENSTMTG00000002608) #33	LCOR (ENSTMTG00000002602)	ENSTMTG00000002590	ARHGAP19 (ENSTMTG00000002583)	ZDHHC16 (ENSTMTG00000002566)
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00990000203892	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000157322.a
Abingdon island giant tortoise	MODERN SPECIES	1912	SUFU (ENSCABG00000004347)	ACTR1A (ENSCABG00000004345)	MFSD13A (ENSCABG00000004344)	SLF2 (ENSCABG00000004331) #12	SEMA4G (ENSCABG00000004327) #13	MRPL43 (ENSCABG00000004324) #14	TWNK (ENSCABG00000004320) #15	LZTS2 (ENSCABG00000004316) #16	ENSCABG00000004314 #17	ENSCABG00000004313 #17	ENSCABG00000004310	SFXN3 (ENSCABG00000004306) #18	KAZALD1 (ENSCABG00000004291) #19	TLX1 (ENSCABG00000004286) #20	LBX1 (ENSCABG00000004283) #21	BTRC (ENSCABG00000003380) #22	ENSCABG00000002455	ENSCABG00000002450 #23	ENSCABG00000002449 #23	DPCD (ENSCABG00000002448) #24	FBXW4 (ENSCABG00000002445) #25	FGF8 (ENSCABG00000002441) #26	ENSCABG00000002439	NPM3 (ENSCABG00000002436) #27	OGA (ENSCABG00000002352) #28	ENSCABG00000002340	KCNIP2 (ENSCABG00000002327) #29
Goode s thornscrub tortoise	MODERN SPECIES	21	MFSD13A (ENSGEVG00005005334)	SLF2 (ENSGEVG00005005256) #12	SEMA4G (ENSGEVG00005005132) #13	MRPL43 (ENSGEVG00005005072) #14	TWNK (ENSGEVG00005005053) #15	LZTS2 (ENSGEVG00005005030) #16	ENSGEVG00005005016	PDZD7 (ENSGEVG00005004930) #17	ENSGEVG00005004858	SFXN3 (ENSGEVG00005004813) #18	KAZALD1 (ENSGEVG00005004786) #19	ENSGEVG00005004760	TLX1 (ENSGEVG00005004739) #20	LBX1 (ENSGEVG00005004717) #21	ENSGEVG00005004693	BTRC (ENSGEVG00005004649) #22	ENSGEVG00005004603	POLL (ENSGEVG00005004570) #23	DPCD (ENSGEVG00005004549) #24	FBXW4 (ENSGEVG00005004522) #25	FGF8 (ENSGEVG00005004467) #26	NPM3 (ENSGEVG00005004443) #27	OGA (ENSGEVG00005004411) #28	KCNIP2 (ENSGEVG00005004222) #29	ARMH3 (ENSGEVG00005003998) #30	HPS6 (ENSGEVG00005003987) #31	LDB1 (ENSGEVG00005003974) #32	ENSGEVG00005003965 #33	ENSGEVG00005003952	LCOR (ENSGEVG00005003931)	SLIT1 (ENSGEVG00005003855)
Chinese turtle	MODERN SPECIES	986												SFXN3 (ENSPSIG00000008833) #18	KAZALD1 (ENSPSIG00000008616) #19	TLX1 (ENSPSIG00000008536) #20	PsLbx1 (ENSPSIG00000001286) #21	BTRC (ENSPSIG00000007315) #22	ENSPSIG00000006189	ENSPSIG00000001277
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01030000235534	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Aves	ANCESTRAL SPECIES	6	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
African ostrich	MODERN SPECIES	290	WBP1L (ENSSCUG00000001977)	ARL3 (ENSSCUG00000001973)	TRIM8 (ENSSCUG00000001970)	SUFU (ENSSCUG00000001964)	ACTR1A (ENSSCUG00000001959)	MFSD13A (ENSSCUG00000001958)	SLF2 (ENSSCUG00000001954) #12	ENSSCUG00000001949	ENSSCUG00000001945 #15	ENSSCUG00000001940 #17	ENSSCUG00000001937	ENSSCUG00000001933 #17	SFXN3 (ENSSCUG00000001926) #18	KAZALD1 (ENSSCUG00000001922) #19	ENSSCUG00000001920	BTRC (ENSSCUG00000001914) #22	ENSSCUG00000001906	POLL (ENSSCUG00000001904) #23	DPCD (ENSSCUG00000001903) #24	FBXW4 (ENSSCUG00000001902) #25	FGF8 (ENSSCUG00000001901) #26	NPM3 (ENSSCUG00000001900) #27	OGA (ENSSCUG00000001899) #28	KCNIP2 (ENSSCUG00000001896) #29	ARMH3 (ENSSCUG00000001895) #30	HPS6 (ENSSCUG00000001892) #31	LDB1 (ENSSCUG00000001889) #32	ENSSCUG00000001887	LCOR (ENSSCUG00000001884)	ARHGAP19 (ENSSCUG00000001882)	RRP12 (ENSSCUG00000001878)
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000155737.b	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798.d #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A	ENSGT00940000157322.a
Golden eagle	MODERN SPECIES	2	TRIM8 (ENSACCG00020009134)	SUFU (ENSACCG00020009151)	ACTR1A (ENSACCG00020009175)	MFSD13A (ENSACCG00020009198)	ENSACCG00020009209	SLF2 (ENSACCG00020009231) #12	SEMA4G (ENSACCG00020009255) #13	MRPL43 (ENSACCG00020009283) #14	TWNK (ENSACCG00020009294) #15	LZTS2 (ENSACCG00020009312) #16	PDZD7 (ENSACCG00020009355) #17	SFXN3 (ENSACCG00020009385) #18	KAZALD1 (ENSACCG00020009402) #19	TLX1 (ENSACCG00020009411) #20	LBX1 (ENSACCG00020009419) #21	BTRC (ENSACCG00020009499) #22	ENSACCG00020009569	POLL (ENSACCG00020009601) #23	DPCD (ENSACCG00020009630) #24	FBXW4 (ENSACCG00020009662) #25	FGF8 (ENSACCG00020009686) #26	NPM3 (ENSACCG00020009702) #27	OGA (ENSACCG00020009722) #28	KCNIP2 (ENSACCG00020009741) #29	ARMH3 (ENSACCG00020009789) #30	HPS6 (ENSACCG00020009815) #31	LDB1 (ENSACCG00020009835) #32	PPRC1 (ENSACCG00020009873) #33	ENSACCG00020009903	LCOR (ENSACCG00020009912)	SLIT1 (ENSACCG00020009931)
Kakapo	MODERN SPECIES	22	ARL3 (ENSSHBG00005003201)	TRIM8 (ENSSHBG00005003188)	SUFU (ENSSHBG00005003152)	ACTR1A (ENSSHBG00005003132)	MFSD13A (ENSSHBG00005003113)	SLF2 (ENSSHBG00005003064) #12	SEMA4G (ENSSHBG00005003005) #13	MRPL43 (ENSSHBG00005002979) #14	TWNK (ENSSHBG00005002956) #15	LZTS2 (ENSSHBG00005002935) #16	PDZD7 (ENSSHBG00005002896) #17	SFXN3 (ENSSHBG00005002866) #18	KAZALD1 (ENSSHBG00005002844) #19	TLX1 (ENSSHBG00005002828) #20	LBX1 (ENSSHBG00005002802) #21	BTRC (ENSSHBG00005002701) #22	ENSSHBG00005002316	POLL (ENSSHBG00005002157) #23	DPCD (ENSSHBG00005002126) #24	FBXW4 (ENSSHBG00005002093) #25	FGF8 (ENSSHBG00005002055) #26	NPM3 (ENSSHBG00005002019) #27	OGA (ENSSHBG00005001995) #28	ENSSHBG00005001961 #29	ARMH3 (ENSSHBG00005001905) #30	HPS6 (ENSSHBG00005001864) #31	LDB1 (ENSSHBG00005001841) #32	PPRC1 (ENSSHBG00005001811) #33	LCOR (ENSSHBG00005001762)	SLIT1 (ENSSHBG00005021002)	ARHGAP19 (ENSSHBG00005020983)
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Great tit	MODERN SPECIES	26	ARL3 (ENSPMJG00000004786)	TRIM8 (ENSPMJG00000004768)	SUFU (ENSPMJG00000004763)	ACTR1A (ENSPMJG00000004762)	MFSD13A (ENSPMJG00000004758)	SLF2 (ENSPMJG00000004736) #12	SEMA4G (ENSPMJG00000004711) #13	MRPL43 (ENSPMJG00000004697) #14	TWNK (ENSPMJG00000004696) #15	LZTS2 (ENSPMJG00000004695) #16	PDZD7 (ENSPMJG00000004677) #17	SFXN3 (ENSPMJG00000004671) #18	KAZALD1 (ENSPMJG00000004666) #19	TLX1 (ENSPMJG00000004663) #20	LBX1 (ENSPMJG00000004661) #21	BTRC (ENSPMJG00000004640) #22	ENSPMJG00000004603	POLL (ENSPMJG00000004590) #23	DPCD (ENSPMJG00000004583) #24	FBXW4 (ENSPMJG00000004570) #25	FGF8 (ENSPMJG00000004565) #26	NPM3 (ENSPMJG00000004562) #27	OGA (ENSPMJG00000004530) #28	ENSPMJG00000004497	KCNIP2 (ENSPMJG00000004479) #29	ARMH3 (ENSPMJG00000004471) #30	HPS6 (ENSPMJG00000004470) #31	ENSPMJG00000004456	LDB1 (ENSPMJG00000004435) #32	PPRC1 (ENSPMJG00000004431) #33	LCOR (ENSPMJG00000004409)
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Medium ground finch	MODERN SPECIES	3	WBP1L (ENSGFOG00000003125)	SFXN2 (ENSGFOG00000003144) ##18	ARL3 (ENSGFOG00000003169)	TRIM8 (ENSGFOG00000003192)	SUFU (ENSGFOG00000003217)	ACTR1A (ENSGFOG00000003336)	MFSD13A (ENSGFOG00000003413)	ENSGFOG00000003429 #12	SEMA4G (ENSGFOG00000003465) #13	TWNK (ENSGFOG00000003482) #15	ENSGFOG00000003498 #17	ENSGFOG00000003506 #17	ENSGFOG00000003538	SFXN3 (ENSGFOG00000003555) #18	KAZALD1 (ENSGFOG00000003573) #19	BTRC (ENSGFOG00000003584) #22	ENSGFOG00000003597	ENSGFOG00000003604	ENSGFOG00000003629	POLL (ENSGFOG00000003670) #23	DPCD (ENSGFOG00000003687) #24	FBXW4 (ENSGFOG00000003718) #25	FGF8 (ENSGFOG00000003860) #26	NPM3 (ENSGFOG00000003871) #27	OGA (ENSGFOG00000003883) #28	KCNIP2 (ENSGFOG00000003914) #29	ARMH3 (ENSGFOG00000003948) #30	LDB1 (ENSGFOG00000003999) #32	ENSGFOG00000004011 #33	ENSGFOG00000004024	LCOR (ENSGFOG00000004029)
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000155737.b	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Zebra finch	MODERN SPECIES	28	ENSTGUG00000024526	SUFU (ENSTGUG00000010131)	ACTR1A (ENSTGUG00000010114)	MFSD13A (ENSTGUG00000010110)	SLF2 (ENSTGUG00000010094) #12	SEMA4G (ENSTGUG00000010077) #13	ENSTGUG00000010071 #14	TWNK (ENSTGUG00000010066) #15	LZTS2 (ENSTGUG00000029397) #16	PDZD7 (ENSTGUG00000010061) #17	SFXN3 (ENSTGUG00000010039) #18	KAZALD1 (ENSTGUG00000010037) #19	ENSTGUG00000027136	TLX1 (ENSTGUG00000010029) #20	LBX1 (ENSTGUG00000010027) #21	BTRC (ENSTGUG00000010007) #22	ENSTGUG00000009983	POLL (ENSTGUG00000009972) #23	DPCD (ENSTGUG00000009967) #24	FBXW4 (ENSTGUG00000009903) #25	FGF8 (ENSTGUG00000009956) #26	NPM3 (ENSTGUG00000009948) #27	OGA (ENSTGUG00000009938) #28	KCNIP2 (ENSTGUG00000009911) #29	ARMH3 (ENSTGUG00000009880) #30	HPS6 (ENSTGUG00000009875) #31	ENSTGUG00000009862	LDB1 (ENSTGUG00000009855) #32	PPRC1 (ENSTGUG00000009839) #33	LCOR (ENSTGUG00000009834)	SLIT1 (ENSTGUG00000009734)
Common canary	MODERN SPECIES	7	ARL3 (ENSSCAG00000016489)	TRIM8 (ENSSCAG00000016492)	SUFU (ENSSCAG00000016503)	ACTR1A (ENSSCAG00000016521)	MFSD13A (ENSSCAG00000016523)	SLF2 (ENSSCAG00000016525) #12	SEMA4G (ENSSCAG00000016526) #13	MRPL43 (ENSSCAG00000016527) #14	TWNK (ENSSCAG00000016528) #15	PDZD7 (ENSSCAG00000016529) #17	ENSSCAG00000016531	ENSSCAG00000016532	SFXN3 (ENSSCAG00000016535) #18	KAZALD1 (ENSSCAG00000016538) #19	TLX1 (ENSSCAG00000016539) #20	BTRC (ENSSCAG00000016542) #22	ENSSCAG00000016545	POLL (ENSSCAG00000016546) #23	DPCD (ENSSCAG00000016547) #24	FBXW4 (ENSSCAG00000016551) #25	FGF8 (ENSSCAG00000016555) #26	NPM3 (ENSSCAG00000016557) #27	OGA (ENSSCAG00000016559) #28	KCNIP2 (ENSSCAG00000016561) #29	ARMH3 (ENSSCAG00000016565) #30	HPS6 (ENSSCAG00000016571) #31	LDB1 (ENSSCAG00000016573) #32	ENSSCAG00000016575 #33	ENSSCAG00000016579	ENSSCAG00000016580	SLIT1 (ENSSCAG00000016584)
Flycatcher	MODERN SPECIES	25	ARL3 (ENSFALG00000023787)	TRIM8 (ENSFALG00000008714)	SUFU (ENSFALG00000008706)	ACTR1A (ENSFALG00000008698)	MFSD13A (ENSFALG00000008689)	ENSFALG00000008686 #12	SEMA4G (ENSFALG00000008684) #13	MRPL43 (ENSFALG00000023885) #14	TWNK (ENSFALG00000008680) #15	LZTS2 (ENSFALG00000008676) #16	ENSFALG00000028985	PDZD7 (ENSFALG00000008671) #17	SFXN3 (ENSFALG00000008668) #18	KAZALD1 (ENSFALG00000008666) #19	TLX1 (ENSFALG00000008660) #20	BTRC (ENSFALG00000008656) #22	ENSFALG00000008634	POLL (ENSFALG00000008619) #23	DPCD (ENSFALG00000008617) #24	FBXW4 (ENSFALG00000008613) #25	FGF8 (ENSFALG00000024705) #26	NPM3 (ENSFALG00000008586) #27	OGA (ENSFALG00000008580) #28	KCNIP2 (ENSFALG00000008575) #29	ARMH3 (ENSFALG00000008569) #30	HPS6 (ENSFALG00000022918) #31	ENSFALG00000008528	PPRC1 (ENSFALG00000008489) #33	LDB1 (ENSFALG00000008498) #32	LCOR (ENSFALG00000025098)	SLIT1 (ENSFALG00000008472)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT01030000235534	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT01030000235534	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698.n #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Japanese quail	MODERN SPECIES	24	SUFU (ENSCJPG00005019984)	ACTR1A (ENSCJPG00005019983)	MFSD13A (ENSCJPG00005019982)	SLF2 (ENSCJPG00005019981) #12	SEMA4G (ENSCJPG00005019979) #13	MRPL43 (ENSCJPG00005019978) #14	TWNK (ENSCJPG00005019977) #15	LZTS2 (ENSCJPG00005019976) #16	ENSCJPG00005019975	PDZD7 (ENSCJPG00005019974) #17	SFXN3 (ENSCJPG00005019973) #18	KAZALD1 (ENSCJPG00005019972) #19	TLX1 (ENSCJPG00005019970) #20	LBX1 (ENSCJPG00005019968) #21	ENSCJPG00005019967	BTRC (ENSCJPG00005019877) #22	ENSCJPG00005019860	ENSCJPG00005019859 #23	ENSCJPG00005019858 #23	DPCD (ENSCJPG00005019857) #24	FBXW4 (ENSCJPG00005019856) #25	FGF8 (ENSCJPG00005019855) #26	NPM3 (ENSCJPG00005019854) #27	OGA (ENSCJPG00005019752) #28	KCNIP2 (ENSCJPG00005019751) #29	ARMH3 (ENSCJPG00005019742) #30	HPS6 (ENSCJPG00005019741) #31	LDB1 (ENSCJPG00005019740) #32	ENSCJPG00005019739 #33	ENSCJPG00005019738	ENSCJPG00005019737
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT01040000244551	ENSGT01030000235534	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698.n #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000154965.A	ENSGT00940000157322.a
Turkey	MODERN SPECIES	28	ARL3 (ENSMGAG00000010320)	TRIM8 (ENSMGAG00000010315)	SUFU (ENSMGAG00000010288)	ACTR1A (ENSMGAG00000010274)	MFSD13A (ENSMGAG00000010269)	SLF2 (ENSMGAG00000010255) #12	SEMA4G (ENSMGAG00000010240) #13	TWNK (ENSMGAG00000010237) #15	LZTS2 (ENSMGAG00000010236) #16	ENSMGAG00000018739 ##17	ENSMGAG00000021897	PDZD7 (ENSMGAG00000010230) #17	SFXN3 (ENSMGAG00000022982) #18	KAZALD1 (ENSMGAG00000010203) #19	ENSMGAG00000018253 #20	BTRC (ENSMGAG00000010164) #22	ENSMGAG00000010147	POLL (ENSMGAG00000010132) #23	DPCD (ENSMGAG00000010112) #24	FBXW4 (ENSMGAG00000010100) #25	FGF8 (ENSMGAG00000015335) #26	NPM3 (ENSMGAG00000019749) #27	OGA (ENSMGAG00000010077) #28	KCNIP2 (ENSMGAG00000010045) #29	ARMH3 (ENSMGAG00000009992) #30	HPS6 (ENSMGAG00000002655) #31	ENSMGAG00000002659	LDB1 (ENSMGAG00000009961) #32	PPRC1 (ENSMGAG00000010023) #33	LCOR (ENSMGAG00000009950)	SLIT1 (ENSMGAG00000009859)
Chicken	MODERN SPECIES	35	TRIM8 (ENSGALG00010018608)	SUFU (ENSGALG00010018581)	ACTR1A (ENSGALG00010018561)	MFSD13A (ENSGALG00010018532)	ENSGALG00010018526 #12	SEMA4G (ENSGALG00010018515) #13	ENSGALG00010018510 #14	C10orf2 (ENSGALG00010018482) #15	LZTS2 (ENSGALG00010023177) #16	ENSGALG00010017964	PDZD7 (ENSGALG00010017959) #17	SFXN3 (ENSGALG00010017949) #18	KAZALD1 (ENSGALG00010017786) #19	TLX1 (ENSGALG00010018467) #20	LBX1 (ENSGALG00010019045) #21	BTRC (ENSGALG00010018103) #22	ENSGALG00010017997	POLL (ENSGALG00010019104) #23	DPCD (ENSGALG00010019139) #24	FBXW4 (ENSGALG00010023185) #25	FGF8 (ENSGALG00010021040) #26	NPM3 (ENSGALG00010021034) #27	MGEA5 (ENSGALG00010021023) #28	KCNIP2 (ENSGALG00010021012) #29	C6H10orf76 (ENSGALG00010020970) #30	HPS6 (ENSGALG00010020949) #31	ENSGALG00010020941	LDB1 (ENSGALG00010020921) #32	PPRC1 (ENSGALG00010020889) #33	LCOR (ENSGALG00010020866)	SLIT1 (ENSGALG00010020778)
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000155737.b	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00980000202932	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.a	ENSGT00940000154965.A
Duck	MODERN SPECIES	24	PCGF6 (ENSAPLG00000026176)	ENSAPLG00000027671	ENSAPLG00000018565	ENSAPLG00000023786	CNNM2 (ENSAPLG00000013829)	BORCS7 (ENSAPLG00000004416)	CYP17A1 (ENSAPLG00000012297)	WBP1L (ENSAPLG00000012879)	SFXN2 (ENSAPLG00000030360) ##18	ARL3 (ENSAPLG00000016017)	TRIM8 (ENSAPLG00000002530)	SUFU (ENSAPLG00000002654)	MFSD13A (ENSAPLG00000003639)	SLF2 (ENSAPLG00000004041) #12	LBX1 (ENSAPLG00000026975) #21	BTRC (ENSAPLG00000008388) #22	ENSAPLG00000008660	DPCD (ENSAPLG00000010260) #24	POLL (ENSAPLG00000010211) #23	FGF8 (ENSAPLG00000025762) #26	NPM3 (ENSAPLG00000010935) #27	OGA (ENSAPLG00000011067) #28	ARMH3 (ENSAPLG00000011883) #30	HPS6 (ENSAPLG00000012202) #31	ENSAPLG00000012284	ENSAPLG00000028566	ENSAPLG00000019156	LCOR (ENSAPLG00000013561)	RRP12 (ENSAPLG00000014387)	ARHGAP19 (ENSAPLG00000014166)	SLIT1 (ENSAPLG00000013620)
Pink-footed goose	MODERN SPECIES	11	ARL3 (ENSABRG00000007391)	TRIM8 (ENSABRG00000007399)	SUFU (ENSABRG00000007415)	ACTR1A (ENSABRG00000007506)	MFSD13A (ENSABRG00000007521)	SLF2 (ENSABRG00000007530) #12	SEMA4G (ENSABRG00000007538) #13	ENSABRG00000007555	TWNK (ENSABRG00000007559) #15	LZTS2 (ENSABRG00000007569) #16	PDZD7 (ENSABRG00000007581) #17	SFXN3 (ENSABRG00000007596) #18	KAZALD1 (ENSABRG00000007609) #19	ENSABRG00000007618	TLX1 (ENSABRG00000007623) #20	BTRC (ENSABRG00000007647) #22	ENSABRG00000007659	POLL (ENSABRG00000007682) #23	DPCD (ENSABRG00000007691) #24	FBXW4 (ENSABRG00000007699) #25	FGF8 (ENSABRG00000007708) #26	NPM3 (ENSABRG00000007714) #27	OGA (ENSABRG00000007745) #28	KCNIP2 (ENSABRG00000007767) #29	ARMH3 (ENSABRG00000007775) #30	ENSABRG00000007812	LDB1 (ENSABRG00000007841) #32	PPRC1 (ENSABRG00000007859) #33	LCOR (ENSABRG00000007875)	SLIT1 (ENSABRG00000007893)	ENSABRG00000007944
Australian saltwater crocodile	MODERN SPECIES	68	TRIM8 (ENSCPRG00005012943)	SUFU (ENSCPRG00005012955)	ACTR1A (ENSCPRG00005012965)	MFSD13A (ENSCPRG00005012971)	SLF2 (ENSCPRG00005012984) #12	SEMA4G (ENSCPRG00005012989) #13	MRPL43 (ENSCPRG00005012999) #14	TWNK (ENSCPRG00005013007) #15	ENSCPRG00005013009 #16	PDZD7 (ENSCPRG00005013012) #17	SFXN3 (ENSCPRG00005013022) #18	KAZALD1 (ENSCPRG00005013088) #19	TLX1 (ENSCPRG00005013094) #20	LBX1 (ENSCPRG00005013102) #21	ENSCPRG00005013103	BTRC (ENSCPRG00005013112) #22	ENSCPRG00005013130	POLL (ENSCPRG00005013150) #23	DPCD (ENSCPRG00005013153) #24	ENSCPRG00005013155 #25	ENSCPRG00005013157 #25	FGF8 (ENSCPRG00005013159) #26	NPM3 (ENSCPRG00005013161) #27	OGA (ENSCPRG00005013170) #28	KCNIP2 (ENSCPRG00005013176) #29	ARMH3 (ENSCPRG00005013194) #30	HPS6 (ENSCPRG00005013211) #31	LDB1 (ENSCPRG00005013215) #32	PPRC1 (ENSCPRG00005013227) #33	LCOR (ENSCPRG00005013234)	SLIT1 (ENSCPRG00005013244)
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Laterata	ANCESTRAL SPECIES		ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Common wall lizard	MODERN SPECIES	13	SUFU (ENSPMRG00000003985)	ACTR1A (ENSPMRG00000004019)	ENSPMRG00000004035	SLF2 (ENSPMRG00000004050) #12	SEMA4G (ENSPMRG00000004128) #13	ENSPMRG00000004260	TWNK (ENSPMRG00000004276) #15	LZTS2 (ENSPMRG00000004294) #16	PDZD7 (ENSPMRG00000004305) #17	ENSPMRG00000004320	ENSPMRG00000004326	SFXN3 (ENSPMRG00000000222) #18	KAZALD1 (ENSPMRG00000000257) #19	TLX1 (ENSPMRG00000000309) #20	LBX1 (ENSPMRG00000000334) #21	BTRC (ENSPMRG00000000447) #22	ENSPMRG00000000604	POLL (ENSPMRG00000000637) #23	DPCD (ENSPMRG00000000665) #24	FBXW4 (ENSPMRG00000000682) #25	ENSPMRG00000000700	FGF8 (ENSPMRG00000000710) #26	NPM3 (ENSPMRG00000000732) #27	OGA (ENSPMRG00000000747) #28	KCNIP2 (ENSPMRG00000000777) #29	ARMH3 (ENSPMRG00000000804) #30	HPS6 (ENSPMRG00000000861) #31	LDB1 (ENSPMRG00000000892) #32	PPRC1 (ENSPMRG00000000943) #33	ENSPMRG00000000986	ENSPMRG00000001008
Argentine black and white tegu	MODERN SPECIES	48	SUFU (ENSSMRG00000007169)	ACTR1A (ENSSMRG00000007165)	MFSD13A (ENSSMRG00000007161)	ENSSMRG00000007154 #12	ENSSMRG00000007144	SEMA4G (ENSSMRG00000007127) #13	MRPL43 (ENSSMRG00000007125) #14	TWNK (ENSSMRG00000007122) #15	LZTS2 (ENSSMRG00000007114) #16	PDZD7 (ENSSMRG00000007101) #17	ENSSMRG00000007098	SFXN3 (ENSSMRG00000007087) #18	KAZALD1 (ENSSMRG00000007079) #19	TLX1 (ENSSMRG00000007046) #20	LBX1 (ENSSMRG00000007031) #21	BTRC (ENSSMRG00000007001) #22
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00530000063586.a	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a	ENSGT00940000154965.A
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00530000064017.a #12	ENSGT00940000157186 #13	ENSGT00390000015375 #14	ENSGT00390000004495 #15	ENSGT00940000154078.a.a #16	ENSGT00950000183002.C #17	ENSGT01030000235534	ENSGT01030000234641.b.a.b.a.a #18	ENSGT00530000063555.B #19	ENSGT00940000158698 #20	ENSGT00940000161756 #21	ENSGT00940000159672 #22	ENSGT00940000164095	ENSGT00940000158515 #23	ENSGT00390000014031 #24	ENSGT00390000005029 #25	ENSGT00940000159518 #26	ENSGT00940000158796 #27	ENSGT00390000007726.a.a #28	ENSGT00940000157798 #29	ENSGT00390000002554 #30	ENSGT00390000001546 #31	ENSGT00390000005639.a.b #32	ENSGT00950000183137.a #33	ENSGT00940000162611.b	ENSGT00940000162611.a	ENSGT00940000154965.A
Mainland tiger snake	MODERN SPECIES		ARL3 (ENSNSUG00000006546)	TRIM8 (ENSNSUG00000006547)	SUFU (ENSNSUG00000006548)	ACTR1A (ENSNSUG00000006559)	MFSD13A (ENSNSUG00000006576)	SEMA4G (ENSNSUG00000006578) #13	MRPL43 (ENSNSUG00000006581) #14	TWNK (ENSNSUG00000006583) #15	LZTS2 (ENSNSUG00000006586) #16	PDZD7 (ENSNSUG00000006588) #17	ENSNSUG00000006593	SFXN3 (ENSNSUG00000006595) #18	KAZALD1 (ENSNSUG00000006604) #19	TLX1 (ENSNSUG00000006606) #20	LBX1 (ENSNSUG00000006607) #21	BTRC (ENSNSUG00000006609) #22	ENSNSUG00000006614	ENSNSUG00000006668 #23	ENSNSUG00000006669 #23	DPCD (ENSNSUG00000006670) #24	FBXW4 (ENSNSUG00000006672) #25	FGF8 (ENSNSUG00000006675) #26	NPM3 (ENSNSUG00000006677) #27	OGA (ENSNSUG00000006678) #28	KCNIP2 (ENSNSUG00000006925) #29	ENSNSUG00000006959	ENSNSUG00000007024 #30	ENSNSUG00000007025	ENSNSUG00000007026 #30	HPS6 (ENSNSUG00000007027) #31	LDB1 (ENSNSUG00000007029) #32
Eastern brown snake	MODERN SPECIES	16														TLX1 (ENSPTXG00000018391) #20	LBX1 (ENSPTXG00000018393) #21	BTRC (ENSPTXG00000018395) #22	ENSPTXG00000018397	POLL (ENSPTXG00000018416) #23	DPCD (ENSPTXG00000018417) #24	FBXW4 (ENSPTXG00000018418) #25	FGF8 (ENSPTXG00000018420) #26	NPM3 (ENSPTXG00000018421) #27	OGA (ENSPTXG00000018422) #28	KCNIP2 (ENSPTXG00000018423) #29	ARMH3 (ENSPTXG00000018430) #30	HPS6 (ENSPTXG00000018431) #31	LDB1 (ENSPTXG00000018432) #32	PPRC1 (ENSPTXG00000018433) #33	ENSPTXG00000018434	LCOR (ENSPTXG00000018435)	SLIT1 (ENSPTXG00000018436)
Blue-lipped sea krait	MODERN SPECIES	5515																BTRC (ENSLLTG00000015936) #22	ENSLLTG00000016911	POLL (ENSLLTG00000016917) #23	DPCD (ENSLLTG00000016918) #24	FBXW4 (ENSLLTG00000016919) #25
Indian cobra	MODERN SPECIES	3	SUFU (ENSNNAG00000014922)	ACTR1A (ENSNNAG00000014936)	MFSD13A (ENSNNAG00000014965)	SLF2 (ENSNNAG00000014985) #12	SEMA4G (ENSNNAG00000015031) #13	ENSNNAG00000015050	TWNK (ENSNNAG00000015073) #15	LZTS2 (ENSNNAG00000015090) #16	PDZD7 (ENSNNAG00000015107) #17	ENSNNAG00000015138	ENSNNAG00000015152	SFXN3 (ENSNNAG00000015203) #18	KAZALD1 (ENSNNAG00000015218) #19	TLX1 (ENSNNAG00000015238) #20	LBX1 (ENSNNAG00000015245) #21	BTRC (ENSNNAG00000015268) #22	ENSNNAG00000015358	POLL (ENSNNAG00000015413) #23	DPCD (ENSNNAG00000015439) #24	FBXW4 (ENSNNAG00000015475) #25	FGF8 (ENSNNAG00000015504) #26	NPM3 (ENSNNAG00000015516) #27	OGA (ENSNNAG00000015525) #28	KCNIP2 (ENSNNAG00000015571) #29	ARMH3 (ENSNNAG00000015743) #30	HPS6 (ENSNNAG00000015864) #31	ENSNNAG00000015868	LDB1 (ENSNNAG00000015901) #32	PPRC1 (ENSNNAG00000015952) #33	LCOR (ENSNNAG00000016005)	SLIT1 (ENSNNAG00000016033)
Lizard	MODERN SPECIES	853									LZTS2 (ENSACAG00000011076) #16	PDZD7 (ENSACAG00000011099) #17	ENSACAG00000011135	SFXN3 (ENSACAG00000029026) #18	KAZALD1 (ENSACAG00000011169) #19	TLX1 (ENSACAG00000011182) #20	LBX1 (ENSACAG00000022501) #21	BTRC (ENSACAG00000011203) #22	ENSACAG00000011539	POLL (ENSACAG00000011850) #23	DPCD (ENSACAG00000029359) #24	FBXW4 (ENSACAG00000011888) #25	FGF8 (ENSACAG00000011928) #26	NPM3 (ENSACAG00000011936) #27	OGA (ENSACAG00000011944) #28	KCNIP2 (ENSACAG00000012032) #29	ARMH3 (ENSACAG00000012211) #30	HPS6 (ENSACAG00000012311) #31	ENSACAG00000023496	LDB1 (ENSACAG00000012317) #32	PPRC1 (ENSACAG00000012404) #33	ENSACAG00000021055	ENSACAG00000012444
tuatara	MODERN SPECIES	1056	ACTR1A (ENSSPUG00000011211)	MFSD13A (ENSSPUG00000011253)	ENSSPUG00000011281 #12	ENSSPUG00000011292 #12	SEMA4G (ENSSPUG00000011303) #13	MRPL43 (ENSSPUG00000011319) #14	TWNK (ENSSPUG00000011329) #15	LZTS2 (ENSSPUG00000011340) #16	ENSSPUG00000011356 #17	ENSSPUG00000011397 #17	ENSSPUG00000011481	SFXN3 (ENSSPUG00000011489) #18	KAZALD1 (ENSSPUG00000011500) #19	TLX1 (ENSSPUG00000011511) #20	LBX1 (ENSSPUG00000011521) #21	BTRC (ENSSPUG00000011559) #22	ENSSPUG00000011646	POLL (ENSSPUG00000011763) #23	DPCD (ENSSPUG00000011780) #24	FBXW4 (ENSSPUG00000011804) #25	FGF8 (ENSSPUG00000011861) #26	NPM3 (ENSSPUG00000011875) #27	OGA (ENSSPUG00000011899) #28	KCNIP2 (ENSSPUG00000011942) #29	ARMH3 (ENSSPUG00000011969) #30	ENSSPUG00000012022	LDB1 (ENSSPUG00000012060) #32	ENSSPUG00000012068 #33	ENSSPUG00000012079 #33	ENSSPUG00000012101	ENSSPUG00000012129