Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00390000004692.d.b #7	ENSGT00940000169249	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.a #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000163953	ENSGT00940000155676 #33
Camelidae	ANCESTRAL SPECIES	26	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b #7	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00940000162914 #12	ENSGT00390000003223 #11	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.a #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000163953	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000156987 #36
Arabian camel	MODERN SPECIES	34	ASF1A (ENSCDRG00005002302) #7	CEP85L (ENSCDRG00005002324) #8	PLN (ENSCDRG00005002352) #9	SLC35F1 (ENSCDRG00005002366) #10	NUS1 (ENSCDRG00005002419) #11	ENSCDRG00005002434 #12	ENSCDRG00005002449 #13	GOPC (ENSCDRG00005002474) #14	DCBLD1 (ENSCDRG00005002557) #15	ROS1 (ENSCDRG00005002608) #16	ENSCDRG00005002682 #17	RFX6 (ENSCDRG00005002698) #18	GPRC6A (ENSCDRG00005002744) #19	FAM162B (ENSCDRG00005002796) #20	KPNA5 (ENSCDRG00005002825) #21	ZUP1 (ENSCDRG00005002876) #22	RSPH4A (ENSCDRG00005002922) #23	ENSCDRG00005002955 #24	RWDD1 (ENSCDRG00005002965) #25	CALHM4 (ENSCDRG00005002979) #26	TRAPPC3L (ENSCDRG00005002989) #27	CALHM5 (ENSCDRG00005003006) #28	CALHM6 (ENSCDRG00005003016) #29	DSE (ENSCDRG00005003068) #30	TSPYL1 (ENSCDRG00005003092) #31	TSPYL4 (ENSCDRG00005003098) #32	NT5DC1 (ENSCDRG00005003104) #33	COL10A1 (ENSCDRG00005003121) #34	ENSCDRG00005003130 #35	FRK (ENSCDRG00005003143) #36	HS3ST5 (ENSCDRG00005003162) #37
Alpaca	MODERN SPECIES	2547									NUS1 (ENSVPAG00000002205) #11	GOPC (ENSVPAG00000002203) #14	DCBLD1 (ENSVPAG00000002199) #15	RFX6 (ENSVPAG00000002198) #18	GPRC6A (ENSVPAG00000002197) #19	FAM162B (ENSVPAG00000002195) #20	KPNA5 (ENSVPAG00000002193) #21	ZUP1 (ENSVPAG00000002192) #22	RSPH4A (ENSVPAG00000002191) #23	RWDD1 (ENSVPAG00000002189) #25	CALHM4 (ENSVPAG00000002188) #26	CALHM5 (ENSVPAG00000002187) #28	TRAPPC3L (ENSVPAG00000002186) #27	ENSVPAG00000002185 #29
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00390000004692.d.b #7	ENSGT00940000169249	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.r ##24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000155676 #33	ENSGT00940000156987 #36
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000169249	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00940000155203.c.a.a.b	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.r ##24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000155676 #33	ENSGT00940000156987 #36
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00940000169249	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00940000155203.c.a.a.b	ENSGT00390000003223.fb.a #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.r ##24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000155676 #33	ENSGT00940000156987 #36
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT01090000260080.b.a	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00940000155203.c.a.a.b	ENSGT00390000003223.fb.a #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.r ##24	ENSGT00390000009168 #25	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000155676 #33	ENSGT00940000156987 #36	ENSGT00390000010210.g
Dolphin	MODERN SPECIES	3433									DCBLD1 (ENSTTRG00000011088) #15	ROS1 (ENSTTRG00000011071) #16	VGLL2 (ENSTTRG00000011067) #17	RFX6 (ENSTTRG00000011052) #18	ENSTTRG00000011044 #19	FAM162B (ENSTTRG00000011040) #20	KPNA5 (ENSTTRG00000011021) #21	ZUP1 (ENSTTRG00000010991) #22	ENSTTRG00000021456	RSPH4A (ENSTTRG00000010968) #23
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT00940000169249	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00940000155203.c.a.a.b	ENSGT00390000003223.fb.a #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.r ##24	ENSGT00390000009168 #25	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000155676 #33	ENSGT00940000156987 #36	ENSGT00390000010210.g
Vaquita	MODERN SPECIES	3	ASF1A (ENSPSNG00000011854) #7	CEP85L (ENSPSNG00000011947) #8	SLC35F1 (ENSPSNG00000012406) #10	ENSPSNG00000012517	ENSPSNG00000012539	ENSPSNG00000012573 #11	ENSPSNG00000012618 #12	GOPC (ENSPSNG00000012679) #14	DCBLD1 (ENSPSNG00000012812) #15	ENSPSNG00000012888	ROS1 (ENSPSNG00000012984) #16	VGLL2 (ENSPSNG00000014117) #17	RFX6 (ENSPSNG00000014229) #18	ENSPSNG00000014478 #19	KPNA5 (ENSPSNG00000014587) #21	ZUP1 (ENSPSNG00000014675) #22	RSPH4A (ENSPSNG00000014807) #23	ENSPSNG00000015114	ENSPSNG00000015188 ##24	RWDD1 (ENSPSNG00000015291) #25	CALHM5 (ENSPSNG00000015370) #28	ENSPSNG00000015417 #27	CALHM6 (ENSPSNG00000015458) #29	DSE (ENSPSNG00000015522) #30	TSPYL1 (ENSPSNG00000008248) #31	TSPYL4 (ENSPSNG00000008269) #32	NT5DC1 (ENSPSNG00000008301) #33	COL10A1 (ENSPSNG00000008333) #34	FRK (ENSPSNG00000008357) #36	ENSPSNG00000008427	HS3ST5 (ENSPSNG00000008454) #37
Monodontidae	ANCESTRAL SPECIES	18	ENSGT01090000260080.b.a	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT01000000221368	ENSGT00390000015655.b #10	ENSGT00940000155203.c.a.a.b	ENSGT00390000003223.fb.a #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.r ##24	ENSGT00390000009168 #25	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT01010000228913	ENSGT00940000154317.a.b #34	ENSGT00960000188119 #35	ENSGT00940000155676 #33	ENSGT00940000156987 #36	ENSGT00940000158991 #37
Narwhal	MODERN SPECIES	301	MCM9 (ENSMMNG00015006031)	PLN (ENSMMNG00015006015) #9	CEP85L (ENSMMNG00015005952) #8	ENSMMNG00015005922	SLC35F1 (ENSMMNG00015005905) #10	ENSMMNG00015005892	NUS1 (ENSMMNG00015005877) #11	ENSMMNG00015005868 #12	GOPC (ENSMMNG00015005841) #14	DCBLD1 (ENSMMNG00015005797) #15	ROS1 (ENSMMNG00015005760) #16	VGLL2 (ENSMMNG00015005717) #17	RFX6 (ENSMMNG00015005664) #18	ENSMMNG00015005645	KPNA5 (ENSMMNG00015005622) #21	ZUP1 (ENSMMNG00015005586) #22	RSPH4A (ENSMMNG00015005528) #23	ENSMMNG00015005470 ##24	RWDD1 (ENSMMNG00015005444) #25	CALHM5 (ENSMMNG00015005431) #28	ENSMMNG00015005423 #27	CALHM6 (ENSMMNG00015005416) #29	DSE (ENSMMNG00015005398) #30	TSPYL1 (ENSMMNG00015005374) #31	TSPYL4 (ENSMMNG00015005368) #32	ENSMMNG00015005366	COL10A1 (ENSMMNG00015005355) #34	ENSMMNG00015005344 #35	NT5DC1 (ENSMMNG00015005330) #33	FRK (ENSMMNG00015005316) #36	HS3ST5 (ENSMMNG00015005299) #37
Beluga whale	MODERN SPECIES	80	ENSDLEG00000010445	PLN (ENSDLEG00000010440) #9	CEP85L (ENSDLEG00000010400) #8	ENSDLEG00000010386	SLC35F1 (ENSDLEG00000010371) #10	ENSDLEG00000010354	ENSDLEG00000010342 #11	ENSDLEG00000010330 #12	GOPC (ENSDLEG00000010264) #14	DCBLD1 (ENSDLEG00000010188) #15	ROS1 (ENSDLEG00000009633) #16	VGLL2 (ENSDLEG00000009573) #17	RFX6 (ENSDLEG00000009399) #18	ENSDLEG00000009360 #20	KPNA5 (ENSDLEG00000009304) #21	ZUFSP (ENSDLEG00000009259) #22	RSPH4A (ENSDLEG00000009231) #23	ENSDLEG00000009142 ##24	RWDD1 (ENSDLEG00000009107) #25	CALHM5 (ENSDLEG00000009096) #28	TRAPPC3L (ENSDLEG00000009065) #27	CALHM6 (ENSDLEG00000009051) #29	DSE (ENSDLEG00000009031) #30	TSPYL1 (ENSDLEG00000009017) #31	TSPYL4 (ENSDLEG00000009007) #32	ENSDLEG00000008984	ENSDLEG00000008963 #35	COL10A1 (ENSDLEG00000008950) #34	NT5DC1 (ENSDLEG00000008913) #33	FRK (ENSDLEG00000008878) #36	HS3ST5 (ENSDLEG00000008858) #37
Sperm whale	MODERN SPECIES	1	CEP85L (ENSPCTG00005011336) #8	PLN (ENSPCTG00005011549) #9	SLC35F1 (ENSPCTG00005011579) #10	ENSPCTG00005011731	NUS1 (ENSPCTG00005011761) #11	ENSPCTG00005011801 #12	GOPC (ENSPCTG00005011840) #14	DCBLD1 (ENSPCTG00005011969) #15	ROS1 (ENSPCTG00005012163) #16	VGLL2 (ENSPCTG00005012958) #17	RFX6 (ENSPCTG00005013021) #18	GPRC6A (ENSPCTG00005013287) #19	ENSPCTG00005013422	ENSPCTG00005013476	KPNA5 (ENSPCTG00005013498) #21	ZUP1 (ENSPCTG00005013556) #22	RSPH4A (ENSPCTG00005013636) #23	ENSPCTG00005013836 ##24	RWDD1 (ENSPCTG00005013868) #25	CALHM4 (ENSPCTG00005013957) #26	CALHM5 (ENSPCTG00005013991) #28	ENSPCTG00005014023 #27	CALHM6 (ENSPCTG00005014068) #29	DSE (ENSPCTG00005014130) #30	TSPYL1 (ENSPCTG00005014244) #31	TSPYL4 (ENSPCTG00005014296) #32	NT5DC1 (ENSPCTG00005014318) #33	COL10A1 (ENSPCTG00005014373) #34	FRK (ENSPCTG00005014412) #36	ENSPCTG00005014516	HS3ST5 (ENSPCTG00005014555) #37
Blue whale	MODERN SPECIES	3	ENSBMSG00010012377 #7	CEP85L (ENSBMSG00010012406) #8	PLN (ENSBMSG00010012457) #9	SLC35F1 (ENSBMSG00010012473) #10	ENSBMSG00010012487	NUS1 (ENSBMSG00010012495) #11	ENSBMSG00010012507 #12	GOPC (ENSBMSG00010012533) #14	DCBLD1 (ENSBMSG00010012558) #15	ROS1 (ENSBMSG00010012625) #16	VGLL2 (ENSBMSG00010012771) #17	RFX6 (ENSBMSG00010012789) #18	FAM162B (ENSBMSG00010012817) #20	ENSBMSG00010012825	KPNA5 (ENSBMSG00010012836) #21	ZUP1 (ENSBMSG00010012859) #22	RSPH4A (ENSBMSG00010012884) #23	ENSBMSG00010012918 ##24	RWDD1 (ENSBMSG00010012927) #25	CALHM5 (ENSBMSG00010012937) #28	ENSBMSG00010012945 #27	CALHM6 (ENSBMSG00010012947) #29	DSE (ENSBMSG00010012963) #30	TSPYL1 (ENSBMSG00010012974) #31	TSPYL4 (ENSBMSG00010012977) #32	NT5DC1 (ENSBMSG00010012985) #33	COL10A1 (ENSBMSG00010012998) #34	FRK (ENSBMSG00010013005) #36	HS3ST5 (ENSBMSG00010013020) #37	ENSBMSG00010013029	MARCKS (ENSBMSG00010013045)
Pecora	ANCESTRAL SPECIES	19	ENSGT00390000004692.d.b #7	ENSGT00940000169249	ENSGT00620000087993.a.a #8	ENSGT00390000002403 #9	ENSGT00390000015655.b #10	ENSGT01030000235179	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.a #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36	ENSGT00940000158991 #37	ENSGT00940000155725
Percora_a	ANCESTRAL SPECIES	21	ENSGT00390000004692.d.b #7	ENSGT00940000169249	ENSGT00620000087993.a.a #8	ENSGT00390000002403 #9	ENSGT00390000015655.b #10	ENSGT01030000235179	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.b ##24	ENSGT00390000009168.v.a #25	ENSGT00940000156772.q.a #24	ENSGT00390000009168.v.b #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36
Bovidae	ANCESTRAL SPECIES	21	ENSGT00390000004692.d.b #7	ENSGT00940000169249	ENSGT00620000087993.a.a #8	ENSGT00390000002403 #9	ENSGT00390000015655.b #10	ENSGT01030000235179	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.b ##24	ENSGT00940000156772.q.a #24	ENSGT00390000009168.v.b #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36	ENSGT00940000158991 #37
Caprinae	ANCESTRAL SPECIES	33	ENSGT00390000004692.d.b #7	ENSGT00940000169249	ENSGT00620000087993.a.a #8	ENSGT00390000002403 #9	ENSGT00390000015655.b #10	ENSGT01030000235179	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.a #24	ENSGT00390000009168.v.a.b #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36	ENSGT00940000158991 #37	ENSGT00940000155725
Rambouillet Sheep	MODERN SPECIES	24	ASF1A (ENSOARG00020022814) #7	ENSOARG00020022845	CEP85L (ENSOARG00020022872) #8	PLN (ENSOARG00020023014) #9	SLC35F1 (ENSOARG00020023042) #10	ENSOARG00020023109	NUS1 (ENSOARG00020023137) #11	ENSOARG00020023154 #12	GOPC (ENSOARG00020023190) #14	DCBLD1 (ENSOARG00020023381) #15	ROS1 (ENSOARG00020003121) #16	VGLL2 (ENSOARG00020003907) #17	RFX6 (ENSOARG00020003959) #18	FAM162B (ENSOARG00020004032) #20	KPNA5 (ENSOARG00020004060) #21	ZUP1 (ENSOARG00020004156) #22	ENSOARG00020004418	ENSOARG00020004445 #25	CALHM4 (ENSOARG00020004478) #26	TRAPPC3L (ENSOARG00020004501) #27	CALHM5 (ENSOARG00020004537) #28	DSE (ENSOARG00020004597) #30	TSPYL1 (ENSOARG00020004668) #31	ENSOARG00020004681 #32	ENSOARG00020004693 #32	NT5DC1 (ENSOARG00020004710) #33	COL10A1 (ENSOARG00020004849) #34	FRK (ENSOARG00020004867) #36	ENSOARG00020004910	HS3ST5 (ENSOARG00020004941) #37	HDAC2 (ENSOARG00020004977)
Goat	MODERN SPECIES	28	ASF1A (ENSCHIG00000008452) #7	CEP85L (ENSCHIG00000025357) #8	PLN (ENSCHIG00000011759) #9	ENSCHIG00000021349	SLC35F1 (ENSCHIG00000020935) #10	ENSCHIG00000010902	ENSCHIG00000025425 #11	ENSCHIG00000018408 #12	GOPC (ENSCHIG00000017940) #14	ENSCHIG00000010524 #15	ROS1 (ENSCHIG00000016323) #16	VGLL2 (ENSCHIG00000014445) #17	RFX6 (ENSCHIG00000021570) #18	KPNA5 (ENSCHIG00000025297) #21	FAM162B (ENSCHIG00000013451) #20	ZUP1 (ENSCHIG00000022998) #22	RSPH4A (ENSCHIG00000022737) #23	ENSCHIG00000014681 #24	ENSCHIG00000020636 #25	CALHM4 (ENSCHIG00000006125) #26	TRAPPC3L (ENSCHIG00000021481) #27	CALHM5 (ENSCHIG00000018702) #28	ENSCHIG00000022717 #29	ENSCHIG00000025860 #29	DSE (ENSCHIG00000010064) #30	TSPYL1 (ENSCHIG00000013019) #31	NT5DC1 (ENSCHIG00000025209) #33	COL10A1 (ENSCHIG00000008425) #34	FRK (ENSCHIG00000006701) #36	HS3ST5 (ENSCHIG00000019513) #37	HDAC2 (ENSCHIG00000024213)
Bovinae	ANCESTRAL SPECIES	31	ENSGT00530000063669.b	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b #7	ENSGT00620000087993.a.a #8	ENSGT00390000002403 #9	ENSGT00390000015655.b #10	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.b ##24	ENSGT00940000156772.q.a #24	ENSGT00390000009168.v.b #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821.g.a #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36	ENSGT00940000158991 #37
Bos	ANCESTRAL SPECIES	19	ENSGT00530000063669.b	ENSGT00390000004692.d.b #7	ENSGT01090000260080.b.a	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT00390000015655.b #10	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.b ##24	ENSGT00940000156772.q.a #24	ENSGT00390000009168.v.b #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821.g.a #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36	ENSGT00940000158991 #37
Bos_a	ANCESTRAL SPECIES	18	ENSGT00390000004692.d.b #7	ENSGT01090000260080.b.a	ENSGT00390000002403 #9	ENSGT00620000087993.a.a #8	ENSGT01030000237615	ENSGT00390000015655.b #10	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.b ##24	ENSGT00940000156772.q.a #24	ENSGT00390000009168.v.b #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #28	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821.g.a #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b #34	ENSGT00940000155676 #33	ENSGT00940000156987 #36	ENSGT00940000158991 #37
Domestic yak	MODERN SPECIES	1	ENSBGRG00000008475 #9	CEP85L (ENSBGRG00000008030) #8	ENSBGRG00000007952	SLC35F1 (ENSBGRG00000007815) #10	NUS1 (ENSBGRG00000007754) #11	ENSBGRG00000007720 #12	GOPC (ENSBGRG00000007399) #14	DCBLD1 (ENSBGRG00000006916) #15	ENSBGRG00000006862	ENSBGRG00000006843	ROS1 (ENSBGRG00000006479) #16	VGLL2 (ENSBGRG00000006319) #17	RFX6 (ENSBGRG00000006177) #18	FAM162B (ENSBGRG00000006132) #20	KPNA5 (ENSBGRG00000006026) #21	ZUP1 (ENSBGRG00000005961) #22	RSPH4A (ENSBGRG00000005878) #23	ENSBGRG00000005844 #24	RWDD1 (ENSBGRG00000005754) #25	CALHM4 (ENSBGRG00000005714) #26	CALHM5 (ENSBGRG00000005669) #28	TRAPPC3L (ENSBGRG00000005625) #27	CALHM6 (ENSBGRG00000005600) #29	DSE (ENSBGRG00000005532) #30	ENSBGRG00000005510 #31	TSPYL4 (ENSBGRG00000005502) #32	COL10A1 (ENSBGRG00000005476) #34	NT5DC1 (ENSBGRG00000005373) #33	FRK (ENSBGRG00000005311) #36	HS3ST5 (ENSBGRG00000013854) #37	HDAC2 (ENSBGRG00000013629)
Wild yak	MODERN SPECIES	855													RFX6 (ENSBMUG00000021385) #18	FAM162B (ENSBMUG00000021406) #20	KPNA5 (ENSBMUG00000021424) #21	ZUP1 (ENSBMUG00000021452) #22	RSPH4A (ENSBMUG00000021494) #23	ENSBMUG00000021516 ##24	ENSBMUG00000021521 #24	RWDD1 (ENSBMUG00000021530) #25	CALHM4 (ENSBMUG00000021540) #26	TRAPPC3L (ENSBMUG00000021553) #27	CALHM5 (ENSBMUG00000021569) #28
Bos_b	ANCESTRAL SPECIES	24	ENSGT00530000063669.b	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b #7	ENSGT00620000087993.a.a #8	ENSGT00390000002403 #9	ENSGT00390000015655.b #10	ENSGT00390000003223 #11	ENSGT00940000162914 #12	ENSGT00940000156535 #14	ENSGT00940000157334 #15	ENSGT00940000160831 #16	ENSGT00530000063353.a.b.a #17	ENSGT01050000244879.b.a.b.b #18	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.q.b ##24	ENSGT00940000156772.q.a #24	ENSGT00940000156772.r ##24	ENSGT00390000009168.v.b #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #27	ENSGT01030000234610.a.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821.g.a #31	ENSGT00940000162991 #32	ENSGT00940000155676 #33	ENSGT00940000154317.a.b #34	ENSGT00940000156987 #36
Cow	MODERN SPECIES	28	FAM184A (ENSBTAG00000015467)	MCM9 (ENSBTAG00000002059)	ASF1A (ENSBTAG00000002058) #7	CEP85L (ENSBTAG00000012929) #8	PLN (ENSBTAG00000012931) #9	SLC35F1 (ENSBTAG00000033657) #10	NUS1 (ENSBTAG00000053374) #11	NEPN (ENSBTAG00000039574) #12	GOPC (ENSBTAG00000016046) #14	DCBLD1 (ENSBTAG00000047338) #15	ROS1 (ENSBTAG00000047600) #16	VGLL2 (ENSBTAG00000046282) #17	RFX6 (ENSBTAG00000000264) #18	FAM162B (ENSBTAG00000033460) #20	KPNA5 (ENSBTAG00000026673) #21	ZUP1 (ENSBTAG00000003878) #22	RSPH4A (ENSBTAG00000011890) #23	ENSBTAG00000050815 ##24	SULT1C4 (ENSBTAG00000026672) ##24	RWDD1 (ENSBTAG00000009689) #25	CALHM4 (ENSBTAG00000033535) #26	TRAPPC3L (ENSBTAG00000033554) #27	CALHM5 (ENSBTAG00000045879) #28	CALHM6 (ENSBTAG00000006549) #29	DSE (ENSBTAG00000005205) #30	TSPYL1 (ENSBTAG00000010885) #31	TSPYL4 (ENSBTAG00000009127) #32	NT5DC1 (ENSBTAG00000003076) #33	COL10A1 (ENSBTAG00000003078) #34	FRK (ENSBTAG00000020018) #36	HS3ST5 (ENSBTAG00000000188) #37
Hybrid Bos Indicus	MODERN SPECIES	28	ENSBIXG00005010773	CEP85L (ENSBIXG00005010729) #8	PLN (ENSBIXG00005010671) #9	SLC35F1 (ENSBIXG00005010639) #10	ENSBIXG00005010624	ENSBIXG00005010607	NUS1 (ENSBIXG00005000685) #11	ENSBIXG00005000708 #12	GOPC (ENSBIXG00005010544) #14	DCBLD1 (ENSBIXG00005000746) #15	ROS1 (ENSBIXG00005010381) #16	VGLL2 (ENSBIXG00005010356) #17	RFX6 (ENSBIXG00005010323) #18	FAM162B (ENSBIXG00005010298) #20	KPNA5 (ENSBIXG00005000829) #21	ZUP1 (ENSBIXG00005010258) #22	RSPH4A (ENSBIXG00005010221) #23	ENSBIXG00005010142 ##24	ENSBIXG00005010118 #24	ENSBIXG00005006416 #25	CALHM4 (ENSBIXG00005010065) #26	TRAPPC3L (ENSBIXG00005010050) #27	CALHM5 (ENSBIXG00005000765) #28	CALHM6 (ENSBIXG00005010017) #29	DSE (ENSBIXG00005009989) #30	ENSBIXG00005009950 #31	TSPYL4 (ENSBIXG00005009942) #32	NT5DC1 (ENSBIXG00005009924) #33	COL10A1 (ENSBIXG00005009915) #34	FRK (ENSBIXG00005009902) #36	HS3ST5 (ENSBIXG00005000647) #37
American bison	MODERN SPECIES	3332	FAM184A (ENSBBBG00000010108)	MCM9 (ENSBBBG00000010053)	ASF1A (ENSBBBG00000010028) #7	CEP85L (ENSBBBG00000010017) #8	PLN (ENSBBBG00000010007) #9	SLC35F1 (ENSBBBG00000010003) #10	NUS1 (ENSBBBG00000009996) #11	ENSBBBG00000009991 #12	GOPC (ENSBBBG00000009979) #14	DCBLD1 (ENSBBBG00000001665) #15	ROS1 (ENSBBBG00000009903) #16	VGLL2 (ENSBBBG00000009836) #17	RFX6 (ENSBBBG00000009832) #18	FAM162B (ENSBBBG00000009824) #20	KPNA5 (ENSBBBG00000009821) #21	ZUP1 (ENSBBBG00000009809) #22	RSPH4A (ENSBBBG00000009798) #23	ENSBBBG00000009781 #25	CALHM4 (ENSBBBG00000009776) #26	TRAPPC3L (ENSBBBG00000009772) #27	CALHM5 (ENSBBBG00000001616) #28	ENSBBBG00000009766 #29	DSE (ENSBBBG00000009038) #30	ENSBBBG00000009757 #31	TSPYL4 (ENSBBBG00000009756) #32	NT5DC1 (ENSBBBG00000009754) #33	COL10A1 (ENSBBBG00000009745) #34	GOT2 (ENSBBBG00000009736)	SLC38A7 (ENSBBBG00000009730)	CNOT1 (ENSBBBG00000009711)	SETD6 (ENSBBBG00000009667)
Siberian musk deer	MODERN SPECIES	55	MCM9 (ENSMMSG00000003712)	ENSMMSG00000003736 #7	CEP85L (ENSMMSG00000003761) #8	PLN (ENSMMSG00000003797) #9	SLC35F1 (ENSMMSG00000003815) #10	ENSMMSG00000003828	NUS1 (ENSMMSG00000003834) #11	ENSMMSG00000003850 #12	GOPC (ENSMMSG00000003874) #14	DCBLD1 (ENSMMSG00000003913) #15	ROS1 (ENSMMSG00000003965) #16	VGLL2 (ENSMMSG00000004130) #17	RFX6 (ENSMMSG00000004143) #18	FAM162B (ENSMMSG00000004205) #20	KPNA5 (ENSMMSG00000004217) #21	ZUP1 (ENSMMSG00000004239) #22	RSPH4A (ENSMMSG00000004275) #23	ENSMMSG00000004337	ENSMMSG00000004355 #24	ENSMMSG00000004377 #25	CALHM4 (ENSMMSG00000004408) #26	TRAPPC3L (ENSMMSG00000004425) #27	CALHM5 (ENSMMSG00000004430) #28	CALHM6 (ENSMMSG00000004443) #29	DSE (ENSMMSG00000004477) #30	TSPYL1 (ENSMMSG00000004513) #31	TSPYL4 (ENSMMSG00000004521) #32	NT5DC1 (ENSMMSG00000004536) #33	COL10A1 (ENSMMSG00000004611) #34	FRK (ENSMMSG00000004640) #36	ENSMMSG00000004714
Yarkand deer	MODERN SPECIES	20	MCM9 (ENSCHYG00000019990)	ASF1A (ENSCHYG00000020334) #7	CEP85L (ENSCHYG00000020415) #8	PLN (ENSCHYG00000020604) #9	SLC35F1 (ENSCHYG00000020751) #10	ENSCHYG00000020966	ENSCHYG00000021027 #11	ENSCHYG00000021123 #12	GOPC (ENSCHYG00000021189) #14	DCBLD1 (ENSCHYG00000021744) #15	ROS1 (ENSCHYG00000021945) #16	ENSCHYG00000022426 #17	RFX6 (ENSCHYG00000022453) #18	FAM162B (ENSCHYG00000022579) #20	KPNA5 (ENSCHYG00000022607) #21	ZUP1 (ENSCHYG00000022708) #22	RSPH4A (ENSCHYG00000022831) #23	ENSCHYG00000023038 #24	ENSCHYG00000023080 #25	CALHM4 (ENSCHYG00000023149) #26	TRAPPC3L (ENSCHYG00000023206) #27	CALHM5 (ENSCHYG00000023274) #28	CALHM6 (ENSCHYG00000023311) #29	ENSCHYG00000023336 #30	ENSCHYG00000023415	TSPYL4 (ENSCHYG00000023428) #32	NT5DC1 (ENSCHYG00000023450) #33	COL10A1 (ENSCHYG00000023514) #34	FRK (ENSCHYG00000023541) #36	HS3ST5 (ENSCHYG00000023609) #37	ENSCHYG00000023650