Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00390000004692.d.b	ENSGT00940000169249	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00960000188119	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00960000188119	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35
Glires	ANCESTRAL SPECIES	5	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00960000188119	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35
Rodentia	ANCESTRAL SPECIES	6	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Muroidea	ANCESTRAL SPECIES	22	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT00940000154319.u.a	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725
Cricetidae	ANCESTRAL SPECIES	11	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT00940000154319.u.a	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725
Northern American deer mouse	MODERN SPECIES	7	Cep85l (ENSPEMG00000008438) #7	Slc35f1 (ENSPEMG00000030425) #8	Nus1 (ENSPEMG00000023792) #9	Nepn (ENSPEMG00000011390) #10	ENSPEMG00000027015 #11	ENSPEMG00000028213 #12	Gopc (ENSPEMG00000017950) #13	Dcbld1 (ENSPEMG00000023463) #14	Ros1 (ENSPEMG00000018962) #15	Vgll2 (ENSPEMG00000011624) #16	ENSPEMG00000028021 #17	Rfx6 (ENSPEMG00000013570) #18	Gprc6a (ENSPEMG00000021921) #19	Fam162b (ENSPEMG00000022270) #20	ENSPEMG00000021071 #21	Zup1 (ENSPEMG00000019963) #22	Rsph4a (ENSPEMG00000015392) #23	ENSPEMG00000010482 #24	Rwdd1 (ENSPEMG00000000119) #25	Calhm4 (ENSPEMG00000017719) #26	Calhm5 (ENSPEMG00000019478) #27	Trappc3l (ENSPEMG00000019941) #28	Calhm6 (ENSPEMG00000019812) #29	Dse (ENSPEMG00000019781) #30	Tspyl1 (ENSPEMG00000019621) #31	Tspyl4 (ENSPEMG00000031222) #32	Col10a1 (ENSPEMG00000019392) #33	Nt5dc1 (ENSPEMG00000020069) #34	Frk (ENSPEMG00000027385) #35	ENSPEMG00000027759 #36	Hs3st5 (ENSPEMG00000027903) #37
Prairie vole	MODERN SPECIES	358	Pln (ENSMOCG00000007426)	Cep85l (ENSMOCG00000006570) #7	Slc35f1 (ENSMOCG00000018060) #8	Nus1 (ENSMOCG00000016436) #9	Nepn (ENSMOCG00000015809) #10	Gopc (ENSMOCG00000020068) #13	Dcbld1 (ENSMOCG00000013753) #14	ENSMOCG00000010376	Ros1 (ENSMOCG00000020353) #15	Vgll2 (ENSMOCG00000001216) #16	ENSMOCG00000004706	Rfx6 (ENSMOCG00000013788) #18	Gprc6a (ENSMOCG00000001619) #19	Fam162b (ENSMOCG00000016808) #20	ENSMOCG00000016429 #21	Zup1 (ENSMOCG00000007844) #22	Rsph4a (ENSMOCG00000015792) #23	ENSMOCG00000012673 #24	ENSMOCG00000021295	ENSMOCG00000019458	Crybg1 (ENSMOCG00000017311)	Rtn4ip1 (ENSMOCG00000022655)	Qrsl1 (ENSMOCG00000015511)	Cd24a (ENSMOCG00000004145)	ENSMOCG00000019641	Mtres1 (ENSMOCG00000016820)	Bend3 (ENSMOCG00000007344)	Pdss2 (ENSMOCG00000002520)	ENSMOCG00000020152	Sobp (ENSMOCG00000019494)	Scml4 (ENSMOCG00000004057)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT00940000154319.u.a	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725
Chinese hamster chok1gshd	MODERN SPECIES	160	ENSCGRG00001014500	Slc35f1 (ENSCGRG00001016195) #8	Nus1 (ENSCGRG00001010462) #9	Nepn (ENSCGRG00001011193) #10	Gopc (ENSCGRG00001012164) #13	ENSCGRG00001016329 #12	Dcbld1 (ENSCGRG00001014316) #14	Ros1 (ENSCGRG00001019975) #15	ENSCGRG00001008034	Vgll2 (ENSCGRG00001012605) #16	ENSCGRG00001016423	Rfx6 (ENSCGRG00001013519) #18	Gprc6a (ENSCGRG00001019351) #19	Fam162b (ENSCGRG00001013690) #20	ENSCGRG00001017023 #21	Zup1 (ENSCGRG00001019649) #22	Rsph4a (ENSCGRG00001022255) #23	ENSCGRG00001022688 #24	ENSCGRG00001022958	Rwdd1 (ENSCGRG00001000262) #25	Calhm4 (ENSCGRG00001000585) #26	Trappc3l (ENSCGRG00001001357) #28	Calhm5 (ENSCGRG00001015860) #27	Calhm6 (ENSCGRG00001016166) #29	Dse (ENSCGRG00001016755) #30	Tspyl1 (ENSCGRG00001016055) #31	Tspyl4 (ENSCGRG00001015452) #32	Nt5dc1 (ENSCGRG00001019057) #34	Col10a1 (ENSCGRG00001011438) #33	Frk (ENSCGRG00001012098) #35	ENSCGRG00001014662
Golden Hamster	MODERN SPECIES	655	Mcm9 (ENSMAUG00000015317)	ENSMAUG00000012325	Pln (ENSMAUG00000007750)	Cep85l (ENSMAUG00000015193) #7	Slc35f1 (ENSMAUG00000011113) #8	Nus1 (ENSMAUG00000019803) #9	Nepn (ENSMAUG00000018286) #10	Gopc (ENSMAUG00000007546) #13	Dcbld1 (ENSMAUG00000010738) #14	Ros1 (ENSMAUG00000016942) #15	Vgll2 (ENSMAUG00000019922) #16	ENSMAUG00000007444	Rfx6 (ENSMAUG00000002997) #18	Fam162b (ENSMAUG00000012733) #20	ENSMAUG00000009856 #21	Zup1 (ENSMAUG00000012807) #22	Rsph4a (ENSMAUG00000009247) #23	ENSMAUG00000009333 #24	Rwdd1 (ENSMAUG00000001504) #25	Calhm4 (ENSMAUG00000020546) #26	Calhm5 (ENSMAUG00000014804) #27	Trappc3l (ENSMAUG00000004214) #28	Calhm6 (ENSMAUG00000002308) #29	Dse (ENSMAUG00000020240) #30	Tspyl1 (ENSMAUG00000018330) #31	Tspyl4 (ENSMAUG00000007306) #32	Col10a1 (ENSMAUG00000021181) #33	Nt5dc1 (ENSMAUG00000018298) #34	Frk (ENSMAUG00000011561) #35	Hs3st5 (ENSMAUG00000011520) #37	Hdac2 (ENSMAUG00000020410)
Murinae	ANCESTRAL SPECIES	41	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT00940000154319.u.a	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24
Mus	ANCESTRAL SPECIES	15	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991 #37	ENSGT00940000156987 #35	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000162991 #32	ENSGT00940000162821 #31	ENSGT00390000006522.b #30	ENSGT01030000234610.a.a #29	ENSGT01030000234610.a.b #27	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT00390000009168 #25	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131	ENSGT00390000010369	ENSGT00940000157815	ENSGT00390000000358
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991 #37	ENSGT00940000156987 #35	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000162991 #32	ENSGT00940000162821 #31	ENSGT00390000006522.b #30	ENSGT01030000234610.a.a #29	ENSGT01030000234610.a.b #27	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT00390000009168 #25	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.ab #24	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131	ENSGT00390000010369	ENSGT00940000157815	ENSGT00390000000358
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991 #37	ENSGT00940000156987 #35	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000162991 #32	ENSGT00940000162821 #31	ENSGT00390000006522.b #30	ENSGT01030000234610.a.a #29	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.b.b #26	ENSGT00390000009168 #25	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.ab #24	ENSGT00940000156772.`b #24	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131	ENSGT00390000010369.m	ENSGT00940000157815
Mouse	MODERN SPECIES	1	Marcks (ENSMUSG00000069662)	Hdac2 (ENSMUSG00000019777)	Hs3st5 (ENSMUSG00000044499) #37	Amd2 (ENSMUSG00000063953)	Frk (ENSMUSG00000019779) #35	Col10a1 (ENSMUSG00000039462) #33	Tspyl4 (ENSMUSG00000039485) #32	Nt5dc1 (ENSMUSG00000039480) #34	Tspyl1 (ENSMUSG00000047514) #31	Dse (ENSMUSG00000039497) #30	Calhm6 (ENSMUSG00000046031) #29	Calhm5 (ENSMUSG00000049872) #27	Calhm4 (ENSMUSG00000039508) #26	Trappc3l (ENSMUSG00000071340) #28	Rwdd1 (ENSMUSG00000019782) #25	Zup1 (ENSMUSG00000039531) #22	Rsph4a (ENSMUSG00000039552) #23	Sult3a1 (ENSMUSG00000069668) #24	Sult3a2 (ENSMUSG00000090298) #24	Clvs2 (ENSMUSG00000019785)	Trdn (ENSMUSG00000019787)	Nkain2 (ENSMUSG00000069670)	Rnf217 (ENSMUSG00000063760)	Tpd52l1 (ENSMUSG00000000296)	Hddc2 (ENSMUSG00000000295)	Hey2 (ENSMUSG00000019789)	Ncoa7 (ENSMUSG00000039697)	Hint3 (ENSMUSG00000019791)	Trmt11 (ENSMUSG00000019792)	Cenpw (ENSMUSG00000075266)	Rspo3 (ENSMUSG00000019880)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991 #37	ENSGT00940000156987 #35	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000162991 #32	ENSGT00940000162821 #31	ENSGT00390000006522.b #30	ENSGT01030000234610.a.a #29	ENSGT01030000234610.a.b #27	ENSGT01030000234610.b.b #26	ENSGT00390000009168 #25	ENSGT00390000003880.b.b #28	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.ab #24	ENSGT00940000156772.`b #24	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131	ENSGT00390000010369.m	ENSGT00940000157815
Steppe mouse	MODERN SPECIES	1833																Zup1 (ENSMSIG00000001266) #22	Rsph4a (ENSMSIG00000001351) #23	Sult3a1 (ENSMSIG00000001379) #24
spretus	MODERN SPECIES	1	Marcks (MGP_SPRETEiJ_G0016049)	Hdac2 (MGP_SPRETEiJ_G0016048)	Hs3st5 (MGP_SPRETEiJ_G0016047) #37	Frk (MGP_SPRETEiJ_G0016046) #35	Col10a1 (MGP_SPRETEiJ_G0016045) #33	Nt5dc1 (MGP_SPRETEiJ_G0016044) #34	Tspyl4 (MGP_SPRETEiJ_G0016043) #32	Tspyl1 (MGP_SPRETEiJ_G0016042) #31	Dse (MGP_SPRETEiJ_G0016041) #30	Calhm6 (MGP_SPRETEiJ_G0016040) #29	Calhm5 (MGP_SPRETEiJ_G0016039) #27	Calhm4 (MGP_SPRETEiJ_G0016038) #26	Trappc3l (MGP_SPRETEiJ_G0016037) #28	Rwdd1 (MGP_SPRETEiJ_G0016036) #25	MGP_SPRETEiJ_G0016035	Zup1 (MGP_SPRETEiJ_G0016034) #22	Rsph4a (MGP_SPRETEiJ_G0016033) #23	Sult3a1 (MGP_SPRETEiJ_G0016032) #24	MGP_SPRETEiJ_G0016031 #24	Clvs2 (MGP_SPRETEiJ_G0016030)	Trdn (MGP_SPRETEiJ_G0016029)	Nkain2 (MGP_SPRETEiJ_G0016028)	Rnf217 (MGP_SPRETEiJ_G0016027)	Tpd52l1 (MGP_SPRETEiJ_G0016026)	Hddc2 (MGP_SPRETEiJ_G0016025)	Hey2 (MGP_SPRETEiJ_G0016024)	Ncoa7 (MGP_SPRETEiJ_G0016023)	Hint3 (MGP_SPRETEiJ_G0016022)	Trmt11 (MGP_SPRETEiJ_G0016021)	Cenpw (MGP_SPRETEiJ_G0016020)	Rspo3 (MGP_SPRETEiJ_G0016019)
Ryukyu mouse	MODERN SPECIES	1	Marcks (MGP_CAROLIEiJ_G0015240)	Hdac2 (MGP_CAROLIEiJ_G0015239)	Hs3st5 (MGP_CAROLIEiJ_G0015238) #37	Frk (MGP_CAROLIEiJ_G0015237) #35	Col10a1 (MGP_CAROLIEiJ_G0015236) #33	Tspyl4 (MGP_CAROLIEiJ_G0015235) #32	Nt5dc1 (MGP_CAROLIEiJ_G0015234) #34	Tspyl1 (MGP_CAROLIEiJ_G0015233) #31	Dse (MGP_CAROLIEiJ_G0015232) #30	Calhm6 (MGP_CAROLIEiJ_G0015231) #29	Calhm5 (MGP_CAROLIEiJ_G0015230) #27	Calhm4 (MGP_CAROLIEiJ_G0015229) #26	Trappc3l (MGP_CAROLIEiJ_G0015228) #28	Rwdd1 (MGP_CAROLIEiJ_G0015227) #25	MGP_CAROLIEiJ_G0015226	Zup1 (MGP_CAROLIEiJ_G0015225) #22	Rsph4a (MGP_CAROLIEiJ_G0015224) #23	MGP_CAROLIEiJ_G0015223 #24	Sult3a1 (MGP_CAROLIEiJ_G0015222) #24	Clvs2 (MGP_CAROLIEiJ_G0015221)	Trdn (MGP_CAROLIEiJ_G0015220)	Nkain2 (MGP_CAROLIEiJ_G0015219)	Rnf217 (MGP_CAROLIEiJ_G0015218)	Tpd52l1 (MGP_CAROLIEiJ_G0015217)	Hddc2 (MGP_CAROLIEiJ_G0015216)	Hey2 (MGP_CAROLIEiJ_G0015215)	Ncoa7 (MGP_CAROLIEiJ_G0015214)	Hint3 (MGP_CAROLIEiJ_G0015213)	Trmt11 (MGP_CAROLIEiJ_G0015212)	Cenpw (MGP_CAROLIEiJ_G0015211)	Rspo3 (MGP_CAROLIEiJ_G0015210)
Shrew mouse	MODERN SPECIES	22	Marcks (MGP_PahariEiJ_G0030657)	Hdac2 (MGP_PahariEiJ_G0030656)	Hs3st5 (MGP_PahariEiJ_G0030655) #37	Frk (MGP_PahariEiJ_G0030654) #35	Col10a1 (MGP_PahariEiJ_G0030653) #33	Tspyl4 (MGP_PahariEiJ_G0030652) #32	Nt5dc1 (MGP_PahariEiJ_G0030651) #34	Tspyl1 (MGP_PahariEiJ_G0030650) #31	Dse (MGP_PahariEiJ_G0030649) #30	MGP_PahariEiJ_G0030648 #29	Calhm5 (MGP_PahariEiJ_G0030647) #27	Calhm4 (MGP_PahariEiJ_G0030646) #26	Trappc3l (MGP_PahariEiJ_G0030645) #28	Rwdd1 (MGP_PahariEiJ_G0030644) #25	MGP_PahariEiJ_G0030643	Zup1 (MGP_PahariEiJ_G0030642) #22	Rsph4a (MGP_PahariEiJ_G0030641) #23	MGP_PahariEiJ_G0030640
Rat	MODERN SPECIES	12	Cep85l (ENSRNOG00000000414) #7	ENSRNOG00000066051	Slc35f1 (ENSRNOG00000000412) #8	Nus1 (ENSRNOG00000000411) #9	Nepn (ENSRNOG00000000410) #10	ENSRNOG00000070377 #12	Gopc (ENSRNOG00000000408) #13	Dcbld1 (ENSRNOG00000000407) #14	LOC100911055 (ENSRNOG00000033891)	Ros1 (ENSRNOG00000000406) #15	Vgll2 (ENSRNOG00000000405) #16	Rfx6 (ENSRNOG00000027949) #18	ENSRNOG00000070167	Gprc6a (ENSRNOG00000000401) #19	Kpna5 (ENSRNOG00000030109) #21	Zup1 (ENSRNOG00000000398) #22	Rsph4a (ENSRNOG00000049696) #23	Ccar1 (ENSRNOG00000000397)	Stox1 (ENSRNOG00000023712)	Ddx50 (ENSRNOG00000000396)	Ddx21 (ENSRNOG00000043099)	Kifbp (ENSRNOG00000000395)	Srgn (ENSRNOG00000000394)	Vps26a (ENSRNOG00000030683)	Supv3l1 (ENSRNOG00000000392)	Hkdc1 (ENSRNOG00000049045)	Hk1 (ENSRNOG00000046891)	Tacr2 (ENSRNOG00000050658)	Tspan15 (ENSRNOG00000046204)	Neurog3 (ENSRNOG00000024413)	Fam241b (ENSRNOG00000000551)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1622																Zup1 (ENSNGAG00000020874) #22	Rsph4a (ENSNGAG00000022773) #23	ENSNGAG00000023286 #24	ENSNGAG00000023845 #24	ENSNGAG00000021507	ENSNGAG00000022138 #25	Calhm4 (ENSNGAG00000011668) #26	Trappc3l (ENSNGAG00000020430) #28	Calhm5 (ENSNGAG00000021647) #27	Calhm6 (ENSNGAG00000022608) #29	Dse (ENSNGAG00000023284) #30	Tspyl1 (ENSNGAG00000002957) #31	Tspyl4 (ENSNGAG00000013340) #32	Nt5dc1 (ENSNGAG00000017414) #34	ENSNGAG00000019635	Frk (ENSNGAG00000023884) #35
Lesser Egyptian jerboa	MODERN SPECIES	44	Fam184a (ENSJJAG00000020537)	ENSJJAG00000008541	Asf1a (ENSJJAG00000009705)	Cep85l (ENSJJAG00000016233) #7	Pln (ENSJJAG00000003066)	ENSJJAG00000021447	ENSJJAG00000013262	Slc35f1 (ENSJJAG00000016095) #8	Nus1 (ENSJJAG00000016913) #9	Nepn (ENSJJAG00000011885) #10	Gopc (ENSJJAG00000013218) #13	Dcbld1 (ENSJJAG00000011489) #14	Ros1 (ENSJJAG00000022739) #15	Vgll2 (ENSJJAG00000015020) #16	Rfx6 (ENSJJAG00000020654) #18	Zup1 (ENSJJAG00000016597) #22	Rag1 (ENSJJAG00000003473)	ENSJJAG00000014496	ENSJJAG00000019626
Kangaroo rat	MODERN SPECIES	476	Asf1a (ENSDORG00000010010)	Cep85l (ENSDORG00000008984) #7	Pln (ENSDORG00000028705)	ENSDORG00000025142	Slc35f1 (ENSDORG00000011293) #8	ENSDORG00000023742 #9	Nepn (ENSDORG00000026879) #10	Gopc (ENSDORG00000015778) #13	Dcbld1 (ENSDORG00000015776) #14	Ros1 (ENSDORG00000007167) #15	Vgll2 (ENSDORG00000016343) #16	Rfx6 (ENSDORG00000013591) #18	Gprc6a (ENSDORG00000013585) #19	Fam162b (ENSDORG00000024159) #20	ENSDORG00000015949 #21	Zup1 (ENSDORG00000003947) #22	Rsph4a (ENSDORG00000003944) #23	ENSDORG00000025806 #24	Rwdd1 (ENSDORG00000012373) #25	Calhm4 (ENSDORG00000012772) #26	Trappc3l (ENSDORG00000012769) #28	Calhm5 (ENSDORG00000012771) #27	Calhm6 (ENSDORG00000012765) #29	Dse (ENSDORG00000012764) #30	Tspyl4 (ENSDORG00000027297) #32	Nt5dc1 (ENSDORG00000010307) #34	ENSDORG00000010312	Frk (ENSDORG00000000702) #35	Hs3st5 (ENSDORG00000028438) #37	Hdac2 (ENSDORG00000013317)	Lama4 (ENSDORG00000012032)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00390000004692.d.b	ENSGT00940000169249	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00390000004692.d.b	ENSGT00940000169249	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.x #24	ENSGT00940000156772.w #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000163953 #33	ENSGT00940000155676 #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35
Marmotini	ANCESTRAL SPECIES	11	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT01100000266009	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772.x #24	ENSGT00940000156772.w #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35
Marmotini_b	ANCESTRAL SPECIES	178	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT01100000266009	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23
Squirrel	MODERN SPECIES	604																ZUP1 (ENSSTOG00000012338) #22	RSPH4A (ENSSTOG00000033876) #23	ENSSTOG00000025159 #24
Arctic ground squirrel	MODERN SPECIES	133	MCM9 (ENSUPAG00010021995)	PLN (ENSUPAG00010021993)	CEP85L (ENSUPAG00010021985) #7	SLC35F1 (ENSUPAG00010021982) #8	NUS1 (ENSUPAG00010021980) #9	ENSUPAG00010021978 #10	ENSUPAG00010021976	GOPC (ENSUPAG00010021972) #13	DCBLD1 (ENSUPAG00010021968) #14	ROS1 (ENSUPAG00010021948) #15	VGLL2 (ENSUPAG00010021945) #16	RFX6 (ENSUPAG00010021936) #18	GPRC6A (ENSUPAG00010021931) #19	FAM162B (ENSUPAG00010021928) #20	KPNA5 (ENSUPAG00010021924) #21	ENSUPAG00010021922 #22
Alpin marmot	MODERN SPECIES	2	ENSMMMG00000016017	PLN (ENSMMMG00000016004)	CEP85L (ENSMMMG00000015976) #7	SLC35F1 (ENSMMMG00000015966) #8	NUS1 (ENSMMMG00000015950) #9	ENSMMMG00000015941 #10	ENSMMMG00000015939	GOPC (ENSMMMG00000015918) #13	DCBLD1 (ENSMMMG00000015903) #14	ROS1 (ENSMMMG00000015799) #15	VGLL2 (ENSMMMG00000015787) #16	RFX6 (ENSMMMG00000015641) #18	GPRC6A (ENSMMMG00000015597) #19	FAM162B (ENSMMMG00000015589) #20	KPNA5 (ENSMMMG00000015469) #21	ZUP1 (ENSMMMG00000015434) #22	RSPH4A (ENSMMMG00000015424) #23	ENSMMMG00000015402 #24	ENSMMMG00000015383 #24	ENSMMMG00000015375 #24	RWDD1 (ENSMMMG00000015368) #25	CALHM4 (ENSMMMG00000015364) #26	CALHM5 (ENSMMMG00000015357) #27	CALHM6 (ENSMMMG00000015349) #29	DSE (ENSMMMG00000015341) #30	TSPYL4 (ENSMMMG00000015326) #32	ENSMMMG00000015321 #33	ENSMMMG00000015316 #34	FRK (ENSMMMG00000015306) #35	HS3ST5 (ENSMMMG00000015290) #37	HDAC2 (ENSMMMG00000015264)
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005007753	CEP85L (ENSSVLG00005007817) #7	ENSSVLG00005008007	PLN (ENSSVLG00005008023)	ENSSVLG00005008035	SLC35F1 (ENSSVLG00005008070) #8	ENSSVLG00005008163 #9	ENSSVLG00005008200 #10	GOPC (ENSSVLG00005008267) #13	ROS1 (ENSSVLG00005008411) #15	VGLL2 (ENSSVLG00005008910) #16	RFX6 (ENSSVLG00005008988) #18	GPRC6A (ENSSVLG00005009132) #19	FAM162B (ENSSVLG00005009241) #20	KPNA5 (ENSSVLG00005009288) #21	ZUP1 (ENSSVLG00005009321) #22	RSPH4A (ENSSVLG00005009389) #23	ENSSVLG00005009507 #24	ENSSVLG00005009556 #25	CALHM4 (ENSSVLG00005009602) #26	TRAPPC3L (ENSSVLG00005009643) #28	CALHM5 (ENSSVLG00005009693) #27	CALHM6 (ENSSVLG00005009719) #29	DSE (ENSSVLG00005009768) #30	TSPYL1 (ENSSVLG00005009835) #31	TSPYL4 (ENSSVLG00005009852) #32	NT5DC1 (ENSSVLG00005009872) #34	COL10A1 (ENSSVLG00005009901)	FRK (ENSSVLG00005009937) #35	ENSSVLG00005010009	ENSSVLG00005010037
Hystricomorpha	ANCESTRAL SPECIES	39	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000155081.D	ENSGT00390000002581	ENSGT00940000158276	ENSGT00940000157935	ENSGT00940000157565	ENSGT00390000009155	ENSGT00940000155884	ENSGT00940000159583	ENSGT00390000018730.B	ENSGT00940000155134	ENSGT00940000155933.b.a	ENSGT00940000154550.a.f	ENSGT00390000004660.C.a.a.b	ENSGT00950000182984.a
Hystricomorpha_a	ANCESTRAL SPECIES	30																ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT01050000244950.a.a.b #21	ENSGT00640000091497.b #20	ENSGT00940000158416 #19	ENSGT01050000244879.b.a.b.b #18	ENSGT00530000063353.a.b.a #16	ENSGT00940000160831 #15	ENSGT00940000157334 #14	ENSGT00940000156535 #13	ENSGT00940000162914 #10	ENSGT00390000003223 #9	ENSGT00390000015655.b #8	ENSGT00620000087993.a.a #7	ENSGT00390000002403	ENSGT01090000260080.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	29																ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT01050000244950.a.a.b #21	ENSGT00940000158416 #19	ENSGT01050000244879.b.a.b.b #18	ENSGT00530000063353.a.b.a #16	ENSGT00940000160831 #15	ENSGT00940000157334 #14	ENSGT00940000156535 #13	ENSGT00390000003223 #9	ENSGT00390000015655.b #8	ENSGT00620000087993.a.a #7	ENSGT00390000002403	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00530000063669.b
Long-tailed chinchilla	MODERN SPECIES	143																ZUP1 (ENSCLAG00000007886) #22	RSPH4A (ENSCLAG00000009580) #23	KPNA5 (ENSCLAG00000010089) #21	GPRC6A (ENSCLAG00000007059) #19	RFX6 (ENSCLAG00000008090) #18	ROS1 (ENSCLAG00000007326) #15	ENSCLAG00000007845 #14	GOPC (ENSCLAG00000008237) #13	NUS1 (ENSCLAG00000010652) #9	SLC35F1 (ENSCLAG00000008410) #8	CEP85L (ENSCLAG00000010088) #7	PLN (ENSCLAG00000007403)	MCM9 (ENSCLAG00000009689)	ASF1A (ENSCLAG00000013483)	FAM184A (ENSCLAG00000006832)	MAN1A1 (ENSCLAG00000007613)
Degu	MODERN SPECIES	75																ZUP1 (ENSODEG00000004926) #22	RSPH4A (ENSODEG00000005270) #23	ENSODEG00000019159	RFX6 (ENSODEG00000006706) #18	VGLL2 (ENSODEG00000005506) #16	ROS1 (ENSODEG00000006047) #15	ENSODEG00000004793	GOPC (ENSODEG00000005332) #13	NUS1 (ENSODEG00000005194) #9	ENSODEG00000019196	SLC35F1 (ENSODEG00000005040) #8	CEP85L (ENSODEG00000005733) #7	PLN (ENSODEG00000019260)	MCM9 (ENSODEG00000005446)	ENSODEG00000005478	FAM184A (ENSODEG00000004943)
Guinea pig	MODERN SPECIES	1	FZD3 (ENSCPOG00000009989)	FBXO16 (ENSCPOG00000019834)	ENSCPOG00000034090	AGPAT5 (ENSCPOG00000006565)	MCPH1 (ENSCPOG00000015508)	ANGPT2 (ENSCPOG00000030082)	CSMD1 (ENSCPOG00000015501)	MYOM2 (ENSCPOG00000002402)	KBTBD11 (ENSCPOG00000026453)	ARHGEF10 (ENSCPOG00000022520)	CLN8 (ENSCPOG00000035105)	DLGAP2 (ENSCPOG00000011579)	ENSCPOG00000013031	TDRP (ENSCPOG00000035181)	FBXO25 (ENSCPOG00000008110)	ZUP1 (ENSCPOG00000000534) #22	RSPH4A (ENSCPOG00000000533) #23	KPNA5 (ENSCPOG00000035973) #21	FAM162B (ENSCPOG00000006389) #20	RFX6 (ENSCPOG00000015023) #18	VGLL2 (ENSCPOG00000021559) #16	ENSCPOG00000012998 #15	DCBLD1 (ENSCPOG00000002737) #14	GOPC (ENSCPOG00000010125) #13	ENSCPOG00000027426 #10	ENSCPOG00000031032	NUS1 (ENSCPOG00000039822) #9	SLC35F1 (ENSCPOG00000029995) #8	ENSCPOG00000024368	TPD52L1 (ENSCPOG00000013150)	HDDC2 (ENSCPOG00000013151)
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000000614	ENSHGLG00000042162	ENSHGLG00000000399	ENSHGLG00000009321	ENSHGLG00000009379	ENSHGLG00000048422	ENSHGLG00000004775	ENSHGLG00000036302	ENSHGLG00000036746 #13	ENSHGLG00000013205 #14	VGLL2 (ENSHGLG00000048393) #16	RFX6 (ENSHGLG00000019573) #18	GPRC6A (ENSHGLG00000036750) #19	ENSHGLG00000008946	KPNA5 (ENSHGLG00000007645) #21	ENSHGLG00000009896 #22	ENSHGLG00000002525 #23	ENSHGLG00000049438	ENSHGLG00000035661	ENSHGLG00000050402	ENSHGLG00000005874	ENSHGLG00000016052	ENSHGLG00000035693	ENSHGLG00000032597	ABHD16A (ENSHGLG00000011099)	CSNK2B (ENSHGLG00000011657)	GPANK1 (ENSHGLG00000046532)	APOM (ENSHGLG00000012211)	C6orf47 (ENSHGLG00000048233)	BAG6 (ENSHGLG00000012423)	ENSHGLG00000032997
Lagomorpha	ANCESTRAL SPECIES	108	ENSGT00530000063669.b	ENSGT00390000004692.d.b	ENSGT01090000260080.b.a	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT01050000244950.a.a.b #21	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000166162	ENSGT00940000162991 #32	ENSGT00960000188119	ENSGT00940000163953 #33	ENSGT00940000154317.a.b	ENSGT00940000155676 #34
Rabbit	MODERN SPECIES	3	ENSOCUG00000033048	NUS1 (ENSOCUG00000011553) #9	ENSOCUG00000024042 #10	GOPC (ENSOCUG00000002627) #13	ENSOCUG00000031141	DCBLD1 (ENSOCUG00000003157) #14	ROS1 (ENSOCUG00000003205) #15	VGLL2 (ENSOCUG00000003200) #16	ENSOCUG00000034186	RFX6 (ENSOCUG00000013227) #18	ENSOCUG00000013444	ENSOCUG00000037461	GPRC6A (ENSOCUG00000010194) #19	FAM162B (ENSOCUG00000022415) #20	ENSOCUG00000037695	ZUP1 (ENSOCUG00000007805) #22	RSPH4A (ENSOCUG00000009852) #23	KPNA5 (ENSOCUG00000007812) #21	ENSOCUG00000021703 #24	ENSOCUG00000022763 #24	SULT3A1 (ENSOCUG00000021060) #24	ENSOCUG00000013592 #25	CALHM4 (ENSOCUG00000025315) #26	CALHM5 (ENSOCUG00000002660) #27	TRAPPC3L (ENSOCUG00000002656) #28	ENSOCUG00000032983	ENSOCUG00000035395	ENSOCUG00000030465	CALHM6 (ENSOCUG00000029266) #29	DSE (ENSOCUG00000007344) #30	ENSOCUG00000032572
Pika	MODERN SPECIES	244																ENSOPRG00000007061 #22	ENSOPRG00000007052 #23
Tree shrew	MODERN SPECIES	415												RFX6 (ENSTBEG00000011557) #18	GPRC6A (ENSTBEG00000011378) #19	FAM162B (ENSTBEG00000011197) #20	KPNA5 (ENSTBEG00000010796) #21	ZUP1 (ENSTBEG00000010563) #22	RSPH4A (ENSTBEG00000010326) #23
Primates	ANCESTRAL SPECIES	5	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725	ENSGT00900000143015
Simiiformes	ANCESTRAL SPECIES	5	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676.q #34	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00910000147104	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939	ENSGT00940000155725
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00910000147104	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725	ENSGT00730000111419
Hominidae	ANCESTRAL SPECIES	5	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00910000148903	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00910000148903	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00390000013354.d.a.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00910000148903	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00390000013354.d.a.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Pan	ANCESTRAL SPECIES	5	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u.a #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00910000148903	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00390000013354.d.a.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Chimpanzee	MODERN SPECIES	19	ASF1A (ENSPTRG00000018554)	MCM9 (ENSPTRG00000018553)	PLN (ENSPTRG00000042771)	CEP85L (ENSPTRG00000018549) #7	SLC35F1 (ENSPTRG00000018548) #8	ENSPTRG00000018547 #9	ENSPTRG00000044107 #10	GOPC (ENSPTRG00000018546) #13	DCBLD1 (ENSPTRG00000018545) #14	ROS1 (ENSPTRG00000018544) #15	VGLL2 (ENSPTRG00000018542) #16	RFX6 (ENSPTRG00000018540) #18	GPRC6A (ENSPTRG00000018539) #19	FAM162B (ENSPTRG00000018538) #20	KPNA5 (ENSPTRG00000018537) #21	ZUP1 (ENSPTRG00000018536) #22	RSPH4A (ENSPTRG00000018535) #23	RWDD1 (ENSPTRG00000018534) #25	CALHM4 (ENSPTRG00000018532) #26	CALHM5 (ENSPTRG00000048761) #27	CALHM6 (ENSPTRG00000018530) #29	TRAPPC3L (ENSPTRG00000050736) #28	DSE (ENSPTRG00000018529) #30	TSPYL1 (ENSPTRG00000018528) #31	ENSPTRG00000051033	TSPYL4 (ENSPTRG00000023905) #32	ENSPTRG00000048668	COL10A1 (ENSPTRG00000018524)	NT5DC1 (ENSPTRG00000018523) #34	ENSPTRG00000045932	FRK (ENSPTRG00000018521) #35
Bonobo	MODERN SPECIES	19	FAM184A (ENSPPAG00000030693)	ASF1A (ENSPPAG00000039518)	MCM9 (ENSPPAG00000027319)	PLN (ENSPPAG00000019702)	CEP85L (ENSPPAG00000031277) #7	SLC35F1 (ENSPPAG00000027433) #8	ENSPPAG00000017927 #9	GOPC (ENSPPAG00000042271) #13	DCBLD1 (ENSPPAG00000030913) #14	ROS1 (ENSPPAG00000040274) #15	VGLL2 (ENSPPAG00000043248) #16	RFX6 (ENSPPAG00000010113) #18	GPRC6A (ENSPPAG00000032903) #19	FAM162B (ENSPPAG00000042060) #20	KPNA5 (ENSPPAG00000033134) #21	ZUP1 (ENSPPAG00000026765) #22	RSPH4A (ENSPPAG00000039243) #23	RWDD1 (ENSPPAG00000035047) #25	ENSPPAG00000019471 #26	CALHM5 (ENSPPAG00000039792) #27	TRAPPC3L (ENSPPAG00000043671) #28	CALHM6 (ENSPPAG00000040382) #29	DSE (ENSPPAG00000039304) #30	TSPYL1 (ENSPPAG00000010073) #31	ENSPPAG00000037203	TSPYL4 (ENSPPAG00000025665) #32	ENSPPAG00000034902 #34	COL10A1 (ENSPPAG00000029466)	ENSPPAG00000008350 #34	ENSPPAG00000009764	FRK (ENSPPAG00000037662) #35
Human	MODERN SPECIES	18	ASF1A (ENSG00000111875)	MCM9 (ENSG00000111877)	PLN (ENSG00000198523)	CEP85L (ENSG00000111860) #7	SLC35F1 (ENSG00000196376) #8	NUS1 (ENSG00000153989) #9	GOPC (ENSG00000047932) #13	DCBLD1 (ENSG00000164465) #14	ENSG00000282218	ROS1 (ENSG00000047936) #15	VGLL2 (ENSG00000170162) #16	RFX6 (ENSG00000185002) #18	GPRC6A (ENSG00000173612) #19	FAM162B (ENSG00000183807) #20	KPNA5 (ENSG00000196911) #21	ZUP1 (ENSG00000153975) #22	RSPH4A (ENSG00000111834) #23	RWDD1 (ENSG00000111832) #25	CALHM4 (ENSG00000164451) #26	CALHM5 (ENSG00000178033) #27	TRAPPC3L (ENSG00000173626) #28	CALHM6 (ENSG00000188820) #29	ENSG00000285446	TSPYL1 (ENSG00000189241) #31	DSE (ENSG00000111817) #30	TSPYL4 (ENSG00000187189) #32	COL10A1 (ENSG00000123500)	NT5DC1 (ENSG00000178425) #34	FRK (ENSG00000111816) #35	HS3ST5 (ENSG00000249853) #37	HDAC2 (ENSG00000196591)
Gorilla	MODERN SPECIES	19	FAM184A (ENSGGOG00000010977)	ASF1A (ENSGGOG00000010053)	MCM9 (ENSGGOG00000004084)	PLN (ENSGGOG00000037676)	CEP85L (ENSGGOG00000003828) #7	SLC35F1 (ENSGGOG00000014788) #8	NUS1 (ENSGGOG00000022321) #9	GOPC (ENSGGOG00000013555) #13	DCBLD1 (ENSGGOG00000001188) #14	ROS1 (ENSGGOG00000014048) #15	VGLL2 (ENSGGOG00000014045) #16	RFX6 (ENSGGOG00000006982) #18	GPRC6A (ENSGGOG00000001199) #19	FAM162B (ENSGGOG00000002045) #20	KPNA5 (ENSGGOG00000011906) #21	ZUP1 (ENSGGOG00000016798) #22	ENSGGOG00000016793 #23	RWDD1 (ENSGGOG00000026889) #25	CALHM4 (ENSGGOG00000017144) #26	CALHM5 (ENSGGOG00000039336) #27	TRAPPC3L (ENSGGOG00000036719) #28	CALHM6 (ENSGGOG00000001375) #29	DSE (ENSGGOG00000026746) #30	TSPYL1 (ENSGGOG00000016740) #31	ENSGGOG00000024360	TSPYL4 (ENSGGOG00000025875) #32	ENSGGOG00000037308	COL10A1 (ENSGGOG00000023907)	NT5DC1 (ENSGGOG00000007465) #34	ENSGGOG00000039649	FRK (ENSGGOG00000034876) #35
Orangutan	MODERN SPECIES	19	FAM184A (ENSPPYG00000016971)	ASF1A (ENSPPYG00000016970)	MCM9 (ENSPPYG00000016969)	PLN (ENSPPYG00000018685)	CEP85L (ENSPPYG00000016967) #7	SLC35F1 (ENSPPYG00000016966) #8	NUS1 (ENSPPYG00000025886) #9	GOPC (ENSPPYG00000016964) #13	DCBLD1 (ENSPPYG00000016963) #14	ROS1 (ENSPPYG00000016962) #15	VGLL2 (ENSPPYG00000016961) #16	RFX6 (ENSPPYG00000016960) #18	GPRC6A (ENSPPYG00000016959) #19	FAM162B (ENSPPYG00000016958) #20	KPNA5 (ENSPPYG00000016957) #21	ZUP1 (ENSPPYG00000016956) #22	RSPH4A (ENSPPYG00000016954) #23	RWDD1 (ENSPPYG00000016953) #25	CALHM4 (ENSPPYG00000016952) #26	CALHM5 (ENSPPYG00000016951) #27	TRAPPC3L (ENSPPYG00000016950) #28	CALHM6 (ENSPPYG00000016949) #29	DSE (ENSPPYG00000016948) #30	TSPYL1 (ENSPPYG00000035346) #31	ENSPPYG00000035461	TSPYL4 (ENSPPYG00000040233) #32	ENSPPYG00000035177	COL10A1 (ENSPPYG00000016944)	NT5DC1 (ENSPPYG00000016943) #34	FRK (ENSPPYG00000016942) #35	HS3ST5 (ENSPPYG00000039787) #37
Gibbon	MODERN SPECIES	18	ENSNLEG00000013543	ASF1A (ENSNLEG00000013535)	PLN (ENSNLEG00000029331)	CEP85L (ENSNLEG00000013486) #7	ENSNLEG00000028147	SLC35F1 (ENSNLEG00000013471) #8	NUS1 (ENSNLEG00000029327) #9	GOPC (ENSNLEG00000013426) #13	DCBLD1 (ENSNLEG00000013410) #14	ROS1 (ENSNLEG00000013311) #15	VGLL2 (ENSNLEG00000013293) #16	RFX6 (ENSNLEG00000013258) #18	ENSNLEG00000013257 #19	ENSNLEG00000013253 #20	KPNA5 (ENSNLEG00000013209) #21	ZUP1 (ENSNLEG00000013173) #22	RSPH4A (ENSNLEG00000013151) #23	RWDD1 (ENSNLEG00000013133) #25	CALHM4 (ENSNLEG00000028191) #26	CALHM5 (ENSNLEG00000013129) #27	TRAPPC3L (ENSNLEG00000013121) #28	CALHM6 (ENSNLEG00000013120) #29	ENSNLEG00000032216	DSE (ENSNLEG00000013106) #30	TSPYL1 (ENSNLEG00000019148) #31	ENSNLEG00000018478	TSPYL4 (ENSNLEG00000013105) #32	COL10A1 (ENSNLEG00000013102)	NT5DC1 (ENSNLEG00000013080) #34	FRK (ENSNLEG00000013075) #35	HS3ST5 (ENSNLEG00000013070) #37
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00910000147104	ENSGT01030000237275	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939	ENSGT00940000155725
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00910000147104	ENSGT01030000237275	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939	ENSGT00940000155725
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00910000147104	ENSGT01030000237275	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939	ENSGT00940000155725
Macaca	ANCESTRAL SPECIES	9	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00910000147104	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725	ENSGT00900000143015
Pig-tailed macaque	MODERN SPECIES	342	ASF1A (ENSMNEG00000032180)	MCM9 (ENSMNEG00000035479)	PLN (ENSMNEG00000004622)	CEP85L (ENSMNEG00000038639) #7	ENSMNEG00000024765	SLC35F1 (ENSMNEG00000032478) #8	NUS1 (ENSMNEG00000013910) #9	GOPC (ENSMNEG00000041231) #13	DCBLD1 (ENSMNEG00000045089) #14	ROS1 (ENSMNEG00000044781) #15	VGLL2 (ENSMNEG00000034485) #16	RFX6 (ENSMNEG00000037412) #18	GPRC6A (ENSMNEG00000035336) #19	FAM162B (ENSMNEG00000032267) #20	KPNA5 (ENSMNEG00000033544) #21	ZUP1 (ENSMNEG00000031978) #22	RSPH4A (ENSMNEG00000038377) #23	RWDD1 (ENSMNEG00000045094) #25	CALHM4 (ENSMNEG00000029150) #26	CALHM5 (ENSMNEG00000044741) #27	TRAPPC3L (ENSMNEG00000045331) #28	CALHM6 (ENSMNEG00000044903) #29	DSE (ENSMNEG00000028181) #30	ENSMNEG00000031556	TSPYL4 (ENSMNEG00000028445) #32	COL10A1 (ENSMNEG00000021680)	NT5DC1 (ENSMNEG00000029093) #34	FRK (ENSMNEG00000042618) #35
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000158188	ENSGT00530000063669.b	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725	ENSGT00900000143015
Rhesus	MODERN SPECIES	14	FAM184A (ENSMMUG00000013302)	ASF1A (ENSMMUG00000008526)	MCM9 (ENSMMUG00000008525)	ENSMMUG00000055852	CEP85L (ENSMMUG00000022184) #7	SLC35F1 (ENSMMUG00000022354) #8	ENSMMUG00000053187	NUS1 (ENSMMUG00000059327) #9	DCBLD1 (ENSMMUG00000017558) #14	ROS1 (ENSMMUG00000023738) #15	VGLL2 (ENSMMUG00000023737) #16	RFX6 (ENSMMUG00000017189) #18	GPRC6A (ENSMMUG00000003072) #19	FAM162B (ENSMMUG00000050688) #20	KPNA5 (ENSMMUG00000048955) #21	ZUP1 (ENSMMUG00000001806) #22	RSPH4A (ENSMMUG00000001805) #23	RWDD1 (ENSMMUG00000007415) #25	CALHM4 (ENSMMUG00000007414) #26	CALHM5 (ENSMMUG00000007412) #27	TRAPPC3L (ENSMMUG00000007413) #28	DSE (ENSMMUG00000007409) #30	TSPYL1 (ENSMMUG00000061148) #31	ENSMMUG00000054037	TSPYL4 (ENSMMUG00000014643) #32	COL10A1 (ENSMMUG00000063074)	NT5DC1 (ENSMMUG00000014638) #34	FRK (ENSMMUG00000014635) #35	ENSMMUG00000057271	HS3ST5 (ENSMMUG00000050295) #37	HDAC2 (ENSMMUG00000008937)
Crab-eating macaque	MODERN SPECIES	14	FAM184A (ENSMFAG00000033715)	ASF1A (ENSMFAG00000035748)	MCM9 (ENSMFAG00000002788)	CEP85L (ENSMFAG00000000904) #7	SLC35F1 (ENSMFAG00000043289) #8	NUS1 (ENSMFAG00000051605) #9	ENSMFAG00000063596	GOPC (ENSMFAG00000032714) #13	DCBLD1 (ENSMFAG00000033065) #14	ROS1 (ENSMFAG00000001072) #15	ENSMFAG00000039023 #16	RFX6 (ENSMFAG00000000913) #18	GPRC6A (ENSMFAG00000037810) #19	FAM162B (ENSMFAG00000050195) #20	KPNA5 (ENSMFAG00000038991) #21	ZUP1 (ENSMFAG00000001086) #22	RSPH4A (ENSMFAG00000038872) #23	RWDD1 (ENSMFAG00000042598) #25	ENSMFAG00000033309 #26	CALHM5 (ENSMFAG00000052041) #27	TRAPPC3L (ENSMFAG00000055248) #28	CALHM6 (ENSMFAG00000041853) #29	DSE (ENSMFAG00000033289) #30	COL10A1 (ENSMFAG00000038014)	NT5DC1 (ENSMFAG00000038038) #34	FRK (ENSMFAG00000000665) #35	ENSMFAG00000047737	ENSMFAG00000063529	HS3ST5 (ENSMFAG00000061930) #37	HDAC2 (ENSMFAG00000040542)	ENSMFAG00000052224
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00530000063669.b	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00860000136122	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676.r #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939
Olive baboon	MODERN SPECIES	16	CEP85L (ENSPANG00000007396) #7	PLN (ENSPANG00000003332)	ENSPANG00000050580	SLC35F1 (ENSPANG00000018515) #8	NUS1 (ENSPANG00000006888) #9	ENSPANG00000042149	GOPC (ENSPANG00000020085) #13	DCBLD1 (ENSPANG00000017288) #14	ENSPANG00000049743	ROS1 (ENSPANG00000022514) #15	VGLL2 (ENSPANG00000016788) #16	RFX6 (ENSPANG00000008240) #18	GPRC6A (ENSPANG00000024072) #19	FAM162B (ENSPANG00000022513) #20	KPNA5 (ENSPANG00000008670) #21	ZUP1 (ENSPANG00000021725) #22	RSPH4A (ENSPANG00000006886) #23	RWDD1 (ENSPANG00000008148) #25	CALHM4 (ENSPANG00000013290) #26	TRAPPC3L (ENSPANG00000024071) #28	CALHM5 (ENSPANG00000006250) #27	CALHM6 (ENSPANG00000038049) #29	ENSPANG00000044624	DSE (ENSPANG00000000826) #30	ENSPANG00000044294	TSPYL1 (ENSPANG00000007994) #31	TSPYL4 (ENSPANG00000035333) #32	NT5DC1 (ENSPANG00000024103) #34	COL10A1 (ENSPANG00000022055)	FRK (ENSPANG00000015735) #35	ENSPANG00000045691
Cercopithecinae_d	ANCESTRAL SPECIES	70	ENSGT00530000063669.b	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223.u #9	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00860000136122	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676.r #34	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939	ENSGT00940000155725
Sooty mangabey	MODERN SPECIES	590	ASF1A (ENSCATG00000037391)	MCM9 (ENSCATG00000039701)	PLN (ENSCATG00000011577)	CEP85L (ENSCATG00000040491) #7	SLC35F1 (ENSCATG00000039775) #8	NUS1 (ENSCATG00000039106) #9	GOPC (ENSCATG00000037476) #13	DCBLD1 (ENSCATG00000033783) #14	ENSCATG00000022159	ROS1 (ENSCATG00000021312) #15	VGLL2 (ENSCATG00000038510) #16	RFX6 (ENSCATG00000034545) #18	GPRC6A (ENSCATG00000038791) #19	FAM162B (ENSCATG00000031733) #20	KPNA5 (ENSCATG00000034707) #21	ZUP1 (ENSCATG00000042362) #22	RSPH4A (ENSCATG00000031193) #23	RWDD1 (ENSCATG00000030010) #25	CALHM4 (ENSCATG00000022187) #26	CALHM5 (ENSCATG00000013734) #27	TRAPPC3L (ENSCATG00000039208) #28	CALHM6 (ENSCATG00000041474) #29	DSE (ENSCATG00000039900) #30	ENSCATG00000043899	TSPYL4 (ENSCATG00000041203) #32	COL10A1 (ENSCATG00000019945)	NT5DC1 (ENSCATG00000021794) #34	FRK (ENSCATG00000039585) #35	HS3ST5 (ENSCATG00000028503) #37	HDAC2 (ENSCATG00000042591)	MARCKS (ENSCATG00000009912)
Drill	MODERN SPECIES	1413				ENSMLEG00000027628	ENSMLEG00000003959	SLC35F1 (ENSMLEG00000012171) #8	NUS1 (ENSMLEG00000035527) #9	GOPC (ENSMLEG00000026392) #13	DCBLD1 (ENSMLEG00000040426) #14	ROS1 (ENSMLEG00000029082) #15	ENSMLEG00000030294 #16	RFX6 (ENSMLEG00000033029) #18	GPRC6A (ENSMLEG00000033168) #19	FAM162B (ENSMLEG00000039589) #20	KPNA5 (ENSMLEG00000041216) #21	ZUP1 (ENSMLEG00000033401) #22	RSPH4A (ENSMLEG00000000631) #23	RWDD1 (ENSMLEG00000011284) #25	CALHM4 (ENSMLEG00000032140) #26	CALHM5 (ENSMLEG00000035316) #27	TRAPPC3L (ENSMLEG00000028506) #28	CALHM6 (ENSMLEG00000041324) #29	DSE (ENSMLEG00000028071) #30	ENSMLEG00000032841	TSPYL4 (ENSMLEG00000036698) #32	NT5DC1 (ENSMLEG00000035573) #34
Vervet Monkey	MODERN SPECIES	4	FAM184A (ENSCSAG00000016090)	MCM9 (ENSCSAG00000016078)	ASF1A (ENSCSAG00000016075)	CEP85L (ENSCSAG00000016067) #7	PLN (ENSCSAG00000018971)	SLC35F1 (ENSCSAG00000016059) #8	NUS1 (ENSCSAG00000016053) #9	GOPC (ENSCSAG00000016048) #13	DCBLD1 (ENSCSAG00000016039) #14	ROS1 (ENSCSAG00000015976) #15	VGLL2 (ENSCSAG00000015869) #16	RFX6 (ENSCSAG00000015856) #18	GPRC6A (ENSCSAG00000015844) #19	FAM162B (ENSCSAG00000015801) #20	KPNA5 (ENSCSAG00000015794) #21	ZUP1 (ENSCSAG00000015785) #22	RSPH4A (ENSCSAG00000015777) #23	RWDD1 (ENSCSAG00000015772) #25	CALHM4 (ENSCSAG00000015763) #26	TRAPPC3L (ENSCSAG00000015735) #28	CALHM5 (ENSCSAG00000015732) #27	CALHM6 (ENSCSAG00000015726) #29	DSE (ENSCSAG00000015723) #30	TSPYL1 (ENSCSAG00000018972) #31	TSPYL4 (ENSCSAG00000018973) #32	NT5DC1 (ENSCSAG00000015718) #34	ENSCSAG00000015707	COL10A1 (ENSCSAG00000015703)	FRK (ENSCSAG00000015700) #35	HS3ST5 (ENSCSAG00000015695) #37	HDAC2 (ENSCSAG00000015692)
Rhinopithecus	ANCESTRAL SPECIES	472												ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.gb #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29
Black snub-nosed monkey	MODERN SPECIES	1771												RFX6 (ENSRBIG00000044389) #18	GPRC6A (ENSRBIG00000029856) #19	FAM162B (ENSRBIG00000032712) #20	KPNA5 (ENSRBIG00000029401) #21	ZUP1 (ENSRBIG00000042607) #22	RSPH4A (ENSRBIG00000033414) #23	ENSRBIG00000023199 #25	CALHM4 (ENSRBIG00000032541) #26	TRAPPC3L (ENSRBIG00000028722) #28	CALHM5 (ENSRBIG00000027627) #27	CALHM6 (ENSRBIG00000007538) #29	ENSRBIG00000001662	DSE (ENSRBIG00000035087) #30
Golden snub-nosed monkey	MODERN SPECIES	1726												RFX6 (ENSRROG00000042517) #18	GPRC6A (ENSRROG00000029975) #19	FAM162B (ENSRROG00000002813) #20	KPNA5 (ENSRROG00000007638) #21	ZUP1 (ENSRROG00000001608) #22	RSPH4A (ENSRROG00000034483) #23	RWDD1 (ENSRROG00000034466) #25	CALHM4 (ENSRROG00000030193) #26	CALHM5 (ENSRROG00000028944) #27	TRAPPC3L (ENSRROG00000036813) #28	CALHM6 (ENSRROG00000024470) #29	ENSRROG00000022531	DSE (ENSRROG00000033698) #30
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00620000087993.a.a #7	ENSGT00390000002403	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.eb #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000155676.q #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00910000147939	ENSGT00940000155725	ENSGT00900000143015
Cebidae	ANCESTRAL SPECIES	5	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.eb #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000155676.q #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725	ENSGT00900000143015	ENSGT00940000159970
Cebidae_a	ANCESTRAL SPECIES	26	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00620000087993.a.a #7	ENSGT00390000002403	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00390000009168.eb #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000170327	ENSGT00940000155676.q #34	ENSGT00940000154317.a.b	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725	ENSGT00730000111419
Capuchin	MODERN SPECIES	11	ANXA11 (ENSCCAG00000037639)	MAT1A (ENSCCAG00000021786)	DYDC1 (ENSCCAG00000026278)	DYDC2 (ENSCCAG00000028493)	NUS1 (ENSCCAG00000020694) #9	ENSCCAG00000024292 #10	ENSCCAG00000028924 #13	DCBLD1 (ENSCCAG00000025349) #14	ENSCCAG00000027081	ROS1 (ENSCCAG00000033956) #15	VGLL2 (ENSCCAG00000028036) #16	RFX6 (ENSCCAG00000019715) #18	GPRC6A (ENSCCAG00000030003) #19	FAM162B (ENSCCAG00000031118) #20	KPNA5 (ENSCCAG00000022746) #21	ZUP1 (ENSCCAG00000025061) #22	RSPH4A (ENSCCAG00000007275) #23	RWDD1 (ENSCCAG00000027935) #25	CALHM4 (ENSCCAG00000029702) #26	TRAPPC3L (ENSCCAG00000035786) #28	CALHM5 (ENSCCAG00000021913) #27	CALHM6 (ENSCCAG00000029008) #29	DSE (ENSCCAG00000030876) #30	EIF3H (ENSCCAG00000033678)	NT5DC1 (ENSCCAG00000024638) #34	COL10A1 (ENSCCAG00000032758)	FRK (ENSCCAG00000025087) #35	ENSCCAG00000001468
Bolivian squirrel monkey	MODERN SPECIES	145	PLN (ENSSBOG00000036386)	SLC35F1 (ENSSBOG00000028196) #8	ENSSBOG00000021486	ENSSBOG00000022939	NUS1 (ENSSBOG00000024151) #9	ENSSBOG00000028014 #10	GOPC (ENSSBOG00000021757) #13	DCBLD1 (ENSSBOG00000023384) #14	ROS1 (ENSSBOG00000026173) #15	ENSSBOG00000027243 #16	RFX6 (ENSSBOG00000029327) #18	ENSSBOG00000031250	GPRC6A (ENSSBOG00000034356) #19	FAM162B (ENSSBOG00000013087) #20	KPNA5 (ENSSBOG00000020656) #21	ZUP1 (ENSSBOG00000023075) #22	RSPH4A (ENSSBOG00000027685) #23	RWDD1 (ENSSBOG00000029590) #25	CALHM4 (ENSSBOG00000006032) #26	TRAPPC3L (ENSSBOG00000010873) #28	CALHM5 (ENSSBOG00000014712) #27	CALHM6 (ENSSBOG00000018753) #29	DSE (ENSSBOG00000019590) #30	ENSSBOG00000020332	ENSSBOG00000020743	ENSSBOG00000022050 #34	COL10A1 (ENSSBOG00000022558)	FRK (ENSSBOG00000024353) #35	ENSSBOG00000025026	HS3ST5 (ENSSBOG00000025511) #37	ENSSBOG00000026123
Marmoset	MODERN SPECIES	16	MCM9 (ENSCJAG00000004148)	PLN (ENSCJAG00000053732)	CEP85L (ENSCJAG00000004178) #7	SLC35F1 (ENSCJAG00000004231) #8	ENSCJAG00000033961 #9	GOPC (ENSCJAG00000004242) #13	ENSCJAG00000004257	ENSCJAG00000070188	ROS1 (ENSCJAG00000004286) #15	VGLL2 (ENSCJAG00000004345) #16	RFX6 (ENSCJAG00000004349) #18	GPRC6A (ENSCJAG00000004373) #19	FAM162B (ENSCJAG00000055731) #20	ENSCJAG00000072141	KPNA5 (ENSCJAG00000004394) #21	ZUP1 (ENSCJAG00000004437) #22	RSPH4A (ENSCJAG00000004455) #23	ENSCJAG00000004474 #25	CALHM4 (ENSCJAG00000004499) #26	CALHM5 (ENSCJAG00000059277) #27	TRAPPC3L (ENSCJAG00000004513) #28	CALHM6 (ENSCJAG00000004524) #29	DSE (ENSCJAG00000004530) #30	TSPYL1 (ENSCJAG00000040079) #31	COL10A1 (ENSCJAG00000004589)	ENSCJAG00000047367 #34	TSPYL4 (ENSCJAG00000034803) #32	FRK (ENSCJAG00000004595) #35	ENSCJAG00000067023	HS3ST5 (ENSCJAG00000086455) #37	HDAC2 (ENSCJAG00000004635)
Mas night monkey	MODERN SPECIES	1107					NUS1 (ENSANAG00000029458) #9	ENSANAG00000031313 #10	GOPC (ENSANAG00000032043) #13	DCBLD1 (ENSANAG00000036214) #14	ROS1 (ENSANAG00000029743) #15	VGLL2 (ENSANAG00000033765) #16	RFX6 (ENSANAG00000035610) #18	ENSANAG00000020549	GPRC6A (ENSANAG00000028734) #19	FAM162B (ENSANAG00000023673) #20	KPNA5 (ENSANAG00000009920) #21	ZUP1 (ENSANAG00000021756) #22	RSPH4A (ENSANAG00000020519) #23	RWDD1 (ENSANAG00000030086) #25	CALHM4 (ENSANAG00000022923) #26	TRAPPC3L (ENSANAG00000026394) #28	ENSANAG00000030183	CALHM5 (ENSANAG00000001421) #27	CALHM6 (ENSANAG00000032722) #29	DSE (ENSANAG00000038310) #30	ENSANAG00000036796	TSPYL1 (ENSANAG00000022346) #31	ENSANAG00000031391 #34	COL10A1 (ENSANAG00000028479)	FRK (ENSANAG00000035872) #35	HS3ST5 (ENSANAG00000026473) #37	ENSANAG00000018971
Tarsier	MODERN SPECIES	6130													GPRC6A (ENSTSYG00000013697) #19	FAM162B (ENSTSYG00000025791) #20	KPNA5 (ENSTSYG00000026661) #21	ZUP1 (ENSTSYG00000000103) #22	RSPH4A (ENSTSYG00000000102) #23
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00390000002403	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000154317.a.b	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35	ENSGT00940000158991 #37
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00530000063669.b	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00620000087993.a.a #7	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.b #27	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725
Mouse lemur	MODERN SPECIES	28	ASF1A (ENSMICG00000048055)	MCM9 (ENSMICG00000016579)	CEP85L (ENSMICG00000014569) #7	SLC35F1 (ENSMICG00000014553) #8	NUS1 (ENSMICG00000045489) #9	ENSMICG00000027119 #10	GOPC (ENSMICG00000037737) #13	DCBLD1 (ENSMICG00000007818) #14	ROS1 (ENSMICG00000007792) #15	VGLL2 (ENSMICG00000007779) #16	RFX6 (ENSMICG00000044294) #18	ENSMICG00000038117	GPRC6A (ENSMICG00000047395) #19	FAM162B (ENSMICG00000032976) #20	KPNA5 (ENSMICG00000037900) #21	ZUP1 (ENSMICG00000013671) #22	RSPH4A (ENSMICG00000032048) #23	ENSMICG00000044337 #24	ENSMICG00000032724 #24	ENSMICG00000048082	ENSMICG00000046073	HACE1 (ENSMICG00000002280)	LIN28B (ENSMICG00000047923)	BVES (ENSMICG00000041560)	POPDC3 (ENSMICG00000045084)	PREP (ENSMICG00000000906)	PRDM1 (ENSMICG00000010329)	ATG5 (ENSMICG00000010334)	CRYBG1 (ENSMICG00000030885)	RTN4IP1 (ENSMICG00000015741)	QRSL1 (ENSMICG00000015754)
Lemuriformes_a	ANCESTRAL SPECIES	63	ENSGT01090000260080.b.a	ENSGT00390000004692.d.b	ENSGT00620000087993.a.a #7	ENSGT00390000002403	ENSGT00390000015655.b #8	ENSGT00390000003223 #9	ENSGT00940000162914 #10	ENSGT00940000156535 #13	ENSGT00940000157334 #14	ENSGT00940000160831 #15	ENSGT00530000063353.a.b.a #16	ENSGT01050000244879.b.a.b.b #18	ENSGT00940000158416 #19	ENSGT00640000091497.b #20	ENSGT01050000244950.a.a.b #21	ENSGT00390000008232 #22	ENSGT00500000044869.a.a #23	ENSGT00940000156772 #24	ENSGT00390000009168 #25	ENSGT01030000234610.b.b #26	ENSGT01030000234610.a.b #27	ENSGT00390000003880.b.b #28	ENSGT01030000234610.a.a #29	ENSGT00390000006522.b #30	ENSGT00940000162821 #31	ENSGT00940000162991 #32	ENSGT00940000155676 #34	ENSGT00940000163953 #33	ENSGT00940000156987 #35	ENSGT00940000158991 #37	ENSGT00940000155725
Coquerels sifaka	MODERN SPECIES	445						NUS1 (ENSPCOG00000020589) #9	ENSPCOG00000019234 #10	GOPC (ENSPCOG00000028025) #13	DCBLD1 (ENSPCOG00000023692) #14	ROS1 (ENSPCOG00000018293) #15	VGLL2 (ENSPCOG00000017437) #16	RFX6 (ENSPCOG00000024904) #18	ENSPCOG00000024330	GPRC6A (ENSPCOG00000013226) #19	KPNA5 (ENSPCOG00000016943) #21	ZUP1 (ENSPCOG00000021558) #22	RSPH4A (ENSPCOG00000006824) #23	CALHM4 (ENSPCOG00000027369) #26	TRAPPC3L (ENSPCOG00000018449) #28	CALHM5 (ENSPCOG00000020027) #27	CALHM6 (ENSPCOG00000015099) #29	DSE (ENSPCOG00000017942) #30	TSPYL1 (ENSPCOG00000020616) #31	NT5DC1 (ENSPCOG00000019513) #34	ENSPCOG00000017572 #33	FRK (ENSPCOG00000016754) #35
Greater bamboo lemur	MODERN SPECIES	117												RFX6 (ENSPSMG00000025293) #18	GPRC6A (ENSPSMG00000025285) #19	FAM162B (ENSPSMG00000025283) #20	KPNA5 (ENSPSMG00000025274) #21	ZUP1 (ENSPSMG00000025258) #22	RSPH4A (ENSPSMG00000025239) #23	ENSPSMG00000025223	ENSPSMG00000025216 #24	RWDD1 (ENSPSMG00000025211) #25	CALHM4 (ENSPSMG00000025205) #26	CALHM5 (ENSPSMG00000025204) #27	TRAPPC3L (ENSPSMG00000025203) #28	CALHM6 (ENSPSMG00000025201) #29	DSE (ENSPSMG00000025197) #30	ENSPSMG00000025178	ENSPSMG00000025176 #31	TSPYL4 (ENSPSMG00000025171) #32	ENSPSMG00000025170 #33	NT5DC1 (ENSPSMG00000025168) #34	FRK (ENSPSMG00000025161) #35
Bushbaby	MODERN SPECIES	117	ASF1A (ENSOGAG00000034346)	MCM9 (ENSOGAG00000005084)	PLN (ENSOGAG00000009077)	CEP85L (ENSOGAG00000009073) #7	ENSOGAG00000029442	SLC35F1 (ENSOGAG00000001897) #8	ENSOGAG00000001894 #9	ENSOGAG00000025632 #10	GOPC (ENSOGAG00000014241) #13	ROS1 (ENSOGAG00000005027) #15	VGLL2 (ENSOGAG00000031570) #16	RFX6 (ENSOGAG00000011937) #18	GPRC6A (ENSOGAG00000011933) #19	FAM162B (ENSOGAG00000011931) #20	KPNA5 (ENSOGAG00000011924) #21	ZUP1 (ENSOGAG00000011921) #22	RSPH4A (ENSOGAG00000011917) #23	ENSOGAG00000030595 #24	ENSOGAG00000025916 #24	RWDD1 (ENSOGAG00000014683) #25	CALHM4 (ENSOGAG00000014682) #26	CALHM5 (ENSOGAG00000014679) #27	TRAPPC3L (ENSOGAG00000014677) #28	CALHM6 (ENSOGAG00000032372) #29	DSE (ENSOGAG00000001191) #30	ENSOGAG00000025070	TSPYL1 (ENSOGAG00000001189) #31	TSPYL4 (ENSOGAG00000031495) #32	COL10A1 (ENSOGAG00000024717)	NT5DC1 (ENSOGAG00000009142) #34	FRK (ENSOGAG00000009140) #35