Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Canidae	ANCESTRAL SPECIES	46	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00940000153609.b.w.b #10	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00980000202730	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00940000153609.b.w.b #10	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00980000202730	ENSGT00980000202468 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37
Dingo	MODERN SPECIES	223	MFSD2B (ENSCAFG00020025582) #7	ENSCAFG00020025601 #8	ATAD2B (ENSCAFG00020025604) #9	ENSCAFG00020025616 #10	KLHL29 (ENSCAFG00020025619) #11	TDRD15 (ENSCAFG00020025627) #12	APOB (ENSCAFG00020025649) #13	LDAH (ENSCAFG00020025670) #14	GDF7 (ENSCAFG00020025671) #15	HS1BP3 (ENSCAFG00020025673) #16	RHOB (ENSCAFG00020025677) #17	ENSCAFG00020025680 #18	ENSCAFG00020025683 #19	PUM2 (ENSCAFG00020025689) #20	ENSCAFG00020025758 #21	SDC1 (ENSCAFG00020025760) #22	LAPTM4A (ENSCAFG00020025761) #23	WDR35 (ENSCAFG00020025847) #24	TTC32 (ENSCAFG00020026024) #25	OSR1 (ENSCAFG00020026025) #26	NT5C1B (ENSCAFG00020026028) #27	RDH14 (ENSCAFG00020026035) #28	ENSCAFG00020026037 #29	KCNS3 (ENSCAFG00020026039) #30	MSGN1 (ENSCAFG00020026040) #31	ENSCAFG00020026044 #32	ENSCAFG00020026045 #33	ENSCAFG00020026046 #34	ENSCAFG00020026047 #35	VSNL1 (ENSCAFG00020026051) #36	RAD51AP2 (ENSCAFG00020026058) #37
Dog	MODERN SPECIES	8	FKBP1B (ENSCAFG00845022652)	WDCP (ENSCAFG00845022467)	ENSCAFG00845022118 #7	ENSCAFG00845021952 #8	ENSCAFG00845021908 #10	ATAD2B (ENSCAFG00845021031) #9	KLHL29 (ENSCAFG00845020825) #11	TDRD15 (ENSCAFG00845020461) #12	APOB (ENSCAFG00845020315) #13	LDAH (ENSCAFG00845020079) #14	GDF7 (ENSCAFG00845020009) #15	HS1BP3 (ENSCAFG00845019848) #16	RHOB (ENSCAFG00845019784) #17	ENSCAFG00845019715 #19	PUM2 (ENSCAFG00845018880) #20	SDC1 (ENSCAFG00845018675) #22	MATN3 (ENSCAFG00845018598) #23	MATN3 (ENSCAFG00845018475)	WDR35 (ENSCAFG00845017734) #24	TTC32 (ENSCAFG00845017602) #25	OSR1 (ENSCAFG00845017551) #26	NT5C1B (ENSCAFG00845017369) #27	NT5C1B (ENSCAFG00845017330) #28	ENSCAFG00845017291	ENSCAFG00845017269 #29	KCNS3 (ENSCAFG00845017227) #30	MSGN1 (ENSCAFG00845017161) #31	GEN1 (ENSCAFG00845017081) #33	SMC6 (ENSCAFG00845016537)	VSNL1 (ENSCAFG00845016286) #36	RAD51AP2 (ENSCAFG00845016237) #37
Red fox	MODERN SPECIES	107		UBXN2A (ENSVVUG00000014898) #8	ENSVVUG00000014896 #10	ATAD2B (ENSVVUG00000014891) #9	KLHL29 (ENSVVUG00000014884) #11	ENSVVUG00000014880	TDRD15 (ENSVVUG00000014860) #12	APOB (ENSVVUG00000014850) #13	LDAH (ENSVVUG00000014846) #14	HS1BP3 (ENSVVUG00000014842) #16	RHOB (ENSVVUG00000014839) #17	ENSVVUG00000014838 #19	ENSVVUG00000014837 #19	PUM2 (ENSVVUG00000014829) #20	ENSVVUG00000014826 #21	SDC1 (ENSVVUG00000014823) #22	LAPTM4A (ENSVVUG00000014821) #23	MATN3 (ENSVVUG00000014820)	WDR35 (ENSVVUG00000014818) #24	ENSVVUG00000014817 #25	OSR1 (ENSVVUG00000014812) #26	NT5C1B (ENSVVUG00000014799) #27	RDH14 (ENSVVUG00000014797) #28	ENSVVUG00000014794	KCNS3 (ENSVVUG00000014792) #30	MSGN1 (ENSVVUG00000014790) #31	GEN1 (ENSVVUG00000014785) #33	SMC6 (ENSVVUG00000013308)	VSNL1 (ENSVVUG00000013234) #36	RAD51AP2 (ENSVVUG00000013222) #37	ENSVVUG00000013219
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00390000005908.y	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
American mink	MODERN SPECIES	7	ATAD2B (ENSNVIG00000012717) #9	KLHL29 (ENSNVIG00000012776) #11	ENSNVIG00000012791	ENSNVIG00000012796	TDRD15 (ENSNVIG00000012820) #12	APOB (ENSNVIG00000012830) #13	B5MDU6 (ENSNVIG00000012863) #14	ENSNVIG00000012897 #15	ENSNVIG00000012914 #15	ENSNVIG00000012923 #16	RHOB (ENSNVIG00000012943) #17	ENSNVIG00000012955 #19	PUM2 (ENSNVIG00000013016) #20	ENSNVIG00000013176	ENSNVIG00000013188 #21	SDC1 (ENSNVIG00000013190) #22	LAPTM4A (ENSNVIG00000013199) #23	MATN3 (ENSNVIG00000013221)	WDR35 (ENSNVIG00000013269) #24	TTC32 (ENSNVIG00000013413) #25	OSR1 (ENSNVIG00000013439) #26	ENSNVIG00000013455	NT5C1B (ENSNVIG00000013468) #27	RDH14 (ENSNVIG00000013495) #28	KCNS3 (ENSNVIG00000013506) #30	ENSNVIG00000013510	MSGN1 (ENSNVIG00000013513) #31	GEN1 (ENSNVIG00000013515) #33	ENSNVIG00000013543 #35	VSNL1 (ENSNVIG00000013664) #36	RAD51AP2 (ENSNVIG00000013682) #37
Ferret	MODERN SPECIES	178	SF3B6 (ENSMPUG00000013957)	FKBP1B (ENSMPUG00000013941)	WDCP (ENSMPUG00000013937)	MFSD2B (ENSMPUG00000013875) #7	UBXN2A (ENSMPUG00000013862) #8	ATAD2B (ENSMPUG00000013855) #9	KLHL29 (ENSMPUG00000013755) #11	TDRD15 (ENSMPUG00000013753) #12	APOB (ENSMPUG00000013749) #13	LDAH (ENSMPUG00000013748) #14	GDF7 (ENSMPUG00000013742) #15	HS1BP3 (ENSMPUG00000013739) #16	RHOB (ENSMPUG00000019487) #17	ENSMPUG00000013736 #19	PUM2 (ENSMPUG00000013734) #20	SDC1 (ENSMPUG00000013732) #22	LAPTM4A (ENSMPUG00000013714) #23	MATN3 (ENSMPUG00000013713)	WDR35 (ENSMPUG00000013708) #24	TTC32 (ENSMPUG00000013701) #25	OSR1 (ENSMPUG00000013697) #26	NT5C1B (ENSMPUG00000013662) #27	RDH14 (ENSMPUG00000013659) #28	KCNS3 (ENSMPUG00000019486) #30	MSGN1 (ENSMPUG00000019484) #31	GEN1 (ENSMPUG00000013651) #33	SMC6 (ENSMPUG00000013644)	VSNL1 (ENSMPUG00000013641) #36	RAD51AP2 (ENSMPUG00000013634) #37	ENSMPUG00000013627	CYRIA (ENSMPUG00000013624)
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b.d #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b.f #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Giant Panda	MODERN SPECIES	14	FKBP1B (ENSAMEG00000029795)	WDCP (ENSAMEG00000002801)	MFSD2B (ENSAMEG00000002807) #7	UBXN2A (ENSAMEG00000002843) #8	ATAD2B (ENSAMEG00000002853) #9	KLHL29 (ENSAMEG00000002886) #11	TDRD15 (ENSAMEG00000029907) #12	APOB (ENSAMEG00000013086) #13	LDAH (ENSAMEG00000029431) #14	ENSAMEG00000002904 #15	ENSAMEG00000025415 #16	RHOB (ENSAMEG00000019884) #17	ENSAMEG00000002884 #19	PUM2 (ENSAMEG00000002823) #20	ENSAMEG00000025209 #21	SDC1 (ENSAMEG00000002804) #22	LAPTM4A (ENSAMEG00000002787) #23	MATN3 (ENSAMEG00000002771)	WDR35 (ENSAMEG00000002724) #24	TTC32 (ENSAMEG00000002717) #25	OSR1 (ENSAMEG00000002708) #26	NT5C1B (ENSAMEG00000002686) #27	KCNS3 (ENSAMEG00000019878) #30	MSGN1 (ENSAMEG00000019874) #31	GEN1 (ENSAMEG00000002666) #33	SMC6 (ENSAMEG00000002654)	VSNL1 (ENSAMEG00000011624) #36	RAD51AP2 (ENSAMEG00000002644) #37	ENSAMEG00000002627	CYRIA (ENSAMEG00000001040)	ENSAMEG00000023555
Ursus	ANCESTRAL SPECIES	27	ENSGT00390000005908.y	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b.d #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b.f #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Polar bear	MODERN SPECIES	223	TP53I3 (ENSUMAG00000022832)	SF3B6 (ENSUMAG00000022835)	ENSUMAG00000022839	WDCP (ENSUMAG00000022841)	MFSD2B (ENSUMAG00000022848) #7	UBXN2A (ENSUMAG00000022883) #8	ATAD2B (ENSUMAG00000022911) #9	KLHL29 (ENSUMAG00000023015) #11	TDRD15 (ENSUMAG00000023037) #12	APOB (ENSUMAG00000023043) #13	LDAH (ENSUMAG00000023067) #14	ENSUMAG00000023070 #16	ENSUMAG00000023094 #19	PUM2 (ENSUMAG00000023198) #20	ENSUMAG00000023203 #21	ENSUMAG00000023205 #22	LAPTM4A (ENSUMAG00000023207) #23	MATN3 (ENSUMAG00000023214)	WDR35 (ENSUMAG00000023232) #24	TTC32 (ENSUMAG00000023371) #25	OSR1 (ENSUMAG00000023373) #26	NT5C1B (ENSUMAG00000023377) #27	RDH14 (ENSUMAG00000023381) #28	KCNS3 (ENSUMAG00000023389) #30	MSGN1 (ENSUMAG00000023391) #31	GEN1 (ENSUMAG00000023394) #33	SMC6 (ENSUMAG00000023406)	VSNL1 (ENSUMAG00000023419) #36	RAD51AP2 (ENSUMAG00000023423) #37	CYRIA (ENSUMAG00000023433)	ENSUMAG00000023440
American black bear	MODERN SPECIES	149														PUM2 (ENSUAMG00000008120) #20	ENSUAMG00000008099 #21	SDC1 (ENSUAMG00000008096) #22	LAPTM4A (ENSUAMG00000008094) #23	ENSUAMG00000008091	WDR35 (ENSUAMG00000007366) #24	TTC32 (ENSUAMG00000007348) #25
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b.c #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Panthera	ANCESTRAL SPECIES	2	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00390000003628.b	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b.k.a #17	ENSGT00950000182945.b.a.a.b.b.b.l #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b.c #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00390000003628.b	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b.k.a #17	ENSGT00950000182945.b.a.a.b.b.b.l #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b.c #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
lion	MODERN SPECIES	3	WDCP (ENSPLOG00000000585)	MFSD2B (ENSPLOG00000000549) #7	UBXN2A (ENSPLOG00000000531) #8	ATAD2B (ENSPLOG00000000487) #9	KLHL29 (ENSPLOG00000000329) #11	ENSPLOG00000000267	TDRD15 (ENSPLOG00000000249) #12	APOB (ENSPLOG00000004809) #13	LDAH (ENSPLOG00000004752) #14	GDF7 (ENSPLOG00000004729) #15	HS1BP3 (ENSPLOG00000004714) #16	RHOB (ENSPLOG00000004676) #17	ENSPLOG00000004582 #19	PUM2 (ENSPLOG00000004537) #20	ENSPLOG00000004519 #21	SDC1 (ENSPLOG00000004513) #22	ENSPLOG00000004505 #23	MATN3 (ENSPLOG00000004487)	WDR35 (ENSPLOG00000004441) #24	TTC32 (ENSPLOG00000004421) #25	OSR1 (ENSPLOG00000004407) #26	NT5C1B (ENSPLOG00000004380) #27	RDH14 (ENSPLOG00000004360) #28	KCNS3 (ENSPLOG00000004351) #30	MSGN1 (ENSPLOG00000004343) #31	GEN1 (ENSPLOG00000004334) #33	SMC6 (ENSPLOG00000004301)	VSNL1 (ENSPLOG00000004292) #36	RAD51AP2 (ENSPLOG00000004282) #37	CYRIA (ENSPLOG00000004262)	ENSPLOG00000004254
leopard	MODERN SPECIES		UBXN2A (ENSPPRG00000022151) #8	ATAD2B (ENSPPRG00000022083) #9	KLHL29 (ENSPPRG00000022044) #11	ENSPPRG00000021990	ENSPPRG00000021960	TDRD15 (ENSPPRG00000020099) #12	APOB (ENSPPRG00000021875) #13	LDAH (ENSPPRG00000021658) #14	GDF7 (ENSPPRG00000021614) #15	HS1BP3 (ENSPPRG00000021577) #16	ENSPPRG00000021519 #17	ENSPPRG00000020084 #17	ENSPPRG00000021503 #19	PUM2 (ENSPPRG00000021443) #20	ENSPPRG00000021380 #21	SDC1 (ENSPPRG00000021362) #22	LAPTM4A (ENSPPRG00000021333) #23	MATN3 (ENSPPRG00000021301)	WDR35 (ENSPPRG00000021186) #24	TTC32 (ENSPPRG00000021136) #25	OSR1 (ENSPPRG00000021067) #26	NT5C1B (ENSPPRG00000021030) #27	RDH14 (ENSPPRG00000020986) #28	KCNS3 (ENSPPRG00000020060) #30	ENSPPRG00000020962	MSGN1 (ENSPPRG00000020043) #31	GEN1 (ENSPPRG00000020921) #33	SMC6 (ENSPPRG00000020812)	VSNL1 (ENSPPRG00000020771) #36	RAD51AP2 (ENSPPRG00000020727) #37	CYRIA (ENSPPRG00000020692)
Tiger	MODERN SPECIES	149	WDCP (ENSPTIG00000011327)	MFSD2B (ENSPTIG00000008501) #7	UBXN2A (ENSPTIG00000006975) #8	ATAD2B (ENSPTIG00000020553) #9	KLHL29 (ENSPTIG00000019549) #11	ENSPTIG00000018573	TDRD15 (ENSPTIG00000006858) #12	ENSPTIG00000017235	APOB (ENSPTIG00000012825) #13	LDAH (ENSPTIG00000011369) #14	HS1BP3 (ENSPTIG00000010200) #16	RHOB (ENSPTIG00000006084) #17	ENSPTIG00000000251 #19	PUM2 (ENSPTIG00000018982) #20	ENSPTIG00000018625 #21	SDC1 (ENSPTIG00000017404) #22	LAPTM4A (ENSPTIG00000016492) #23	MATN3 (ENSPTIG00000015261)	WDR35 (ENSPTIG00000012685) #24	TTC32 (ENSPTIG00000012474) #25	OSR1 (ENSPTIG00000012004) #26	NT5C1B (ENSPTIG00000011201) #27	RDH14 (ENSPTIG00000010724) #28	KCNS3 (ENSPTIG00000006472) #30	MSGN1 (ENSPTIG00000006467) #31	GEN1 (ENSPTIG00000007224) #33	SMC6 (ENSPTIG00000001154)	VSNL1 (ENSPTIG00000020980) #36	RAD51AP2 (ENSPTIG00000020726) #37	CYRIA (ENSPTIG00000019497)	ENSPTIG00000018921
Cat	MODERN SPECIES	2	ENSFCAG00000040740	WDCP (ENSFCAG00000004303)	MFSD2B (ENSFCAG00000004302) #7	UBXN2A (ENSFCAG00000028218) #8	ATAD2B (ENSFCAG00000030573) #9	KLHL29 (ENSFCAG00000003613) #11	TDRD15 (ENSFCAG00000035443) #12	APOB (ENSFCAG00000029807) #13	LDAH (ENSFCAG00000026226) #14	GDF7 (ENSFCAG00000044521) #15	HS1BP3 (ENSFCAG00000002398) #16	ENSFCAG00000048458 #19	ENSFCAG00000028084 #19	PUM2 (ENSFCAG00000027520) #20	ENSFCAG00000039293 #21	SDC1 (ENSFCAG00000005354) #22	ENSFCAG00000043657 #23	MATN3 (ENSFCAG00000033314)	WDR35 (ENSFCAG00000005351) #24	TTC32 (ENSFCAG00000037766) #25	OSR1 (ENSFCAG00000026754) #26	NT5C1B (ENSFCAG00000010773) #27	KCNS3 (ENSFCAG00000014253) #30	MSGN1 (ENSFCAG00000045777) #31	GEN1 (ENSFCAG00000013581) #33	SMC6 (ENSFCAG00000013578)	VSNL1 (ENSFCAG00000023416) #36	RAD51AP2 (ENSFCAG00000028900) #37	CYRIA (ENSFCAG00000004125)	MYCN (ENSFCAG00000043374)	ENSFCAG00000048673
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Greater horseshoe bat	MODERN SPECIES	4	SF3B6 (ENSRFEG00010018003)	FKBP1B (ENSRFEG00010018043)	WDCP (ENSRFEG00010018155)	MFSD2B (ENSRFEG00010005251) #7	UBXN2A (ENSRFEG00010005270) #8	ATAD2B (ENSRFEG00010005280) #9	KLHL29 (ENSRFEG00010005296) #11	ENSRFEG00010005311	APOB (ENSRFEG00010005349) #13	LDAH (ENSRFEG00010005397) #14	GDF7 (ENSRFEG00010005440) #15	HS1BP3 (ENSRFEG00010005461) #16	RHOB (ENSRFEG00010005478) #17	PUM2 (ENSRFEG00010005562) #20	ENSRFEG00010005671 #21	SDC1 (ENSRFEG00010005688) #22	LAPTM4A (ENSRFEG00010005720) #23	MATN3 (ENSRFEG00010005757)	WDR35 (ENSRFEG00010005857) #24	TTC32 (ENSRFEG00010005945) #25	OSR1 (ENSRFEG00010005966) #26	NT5C1B (ENSRFEG00010006003) #27	RDH14 (ENSRFEG00010006059) #28	KCNS3 (ENSRFEG00010006076) #30	MSGN1 (ENSRFEG00010006094) #31	GEN1 (ENSRFEG00010006120) #33	SMC6 (ENSRFEG00010006174)	VSNL1 (ENSRFEG00010006243) #36	RAD51AP2 (ENSRFEG00010006267) #37	CYRIA (ENSRFEG00010006289)	MYCN (ENSRFEG00010006325)
Microbat	MODERN SPECIES	1031	ENSMLUG00000030749	ENSMLUG00000013466 #7	UBXN2A (ENSMLUG00000015640) #8	ATAD2B (ENSMLUG00000004476) #9	KLHL29 (ENSMLUG00000004470) #11	TDRD15 (ENSMLUG00000007897) #12	APOB (ENSMLUG00000007812) #13	ENSMLUG00000029392	LDAH (ENSMLUG00000007792) #14	ENSMLUG00000027645 #15	HS1BP3 (ENSMLUG00000022201) #16	ENSMLUG00000005981	RHOB (ENSMLUG00000001627) #17	ENSMLUG00000023764 #19	PUM2 (ENSMLUG00000007362) #20	SDC1 (ENSMLUG00000007349) #22	LAPTM4A (ENSMLUG00000001596) #23	MATN3 (ENSMLUG00000003456)	WDR35 (ENSMLUG00000001419) #24	TTC32 (ENSMLUG00000001415) #25	OSR1 (ENSMLUG00000011374) #26	NT5C1B (ENSMLUG00000015910) #27	RDH14 (ENSMLUG00000024368) #28
Megabat	MODERN SPECIES	2734															PUM2 (ENSPVAG00000002920) #20	SDC1 (ENSPVAG00000002916) #22	LAPTM4A (ENSPVAG00000002909) #23	MATN3 (ENSPVAG00000002905)	WDR35 (ENSPVAG00000002899) #24	TTC32 (ENSPVAG00000002897) #25
Equus	ANCESTRAL SPECIES	7	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000170401	ENSGT01100000265002	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT01090000263317.a	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Donkey	MODERN SPECIES	26	UBXN2A (ENSEASG00005009983) #8	ATAD2B (ENSEASG00005009516) #9	KLHL29 (ENSEASG00005009482) #11	ENSEASG00005009479	ENSEASG00005009477	ENSEASG00005009474	TDRD15 (ENSEASG00005034301) #12	APOB (ENSEASG00005009466) #13	LDAH (ENSEASG00005009459) #14	GDF7 (ENSEASG00005009457) #15	HS1BP3 (ENSEASG00005009454) #16	RHOB (ENSEASG00005009448) #17	ENSEASG00005027331	ENSEASG00005009442 #19	PUM2 (ENSEASG00005009429) #20	SDC1 (ENSEASG00005009418) #22	LAPTM4A (ENSEASG00005009414) #23	MATN3 (ENSEASG00005009408)	WDR35 (ENSEASG00005009400) #24	TTC32 (ENSEASG00005026368) #25	OSR1 (ENSEASG00005009388) #26	NT5C1B (ENSEASG00005009376) #27	RDH14 (ENSEASG00005029880) #28	KCNS3 (ENSEASG00005009368) #30	MSGN1 (ENSEASG00005009364) #31	GEN1 (ENSEASG00005023619) #33	SMC6 (ENSEASG00005009355)	VSNL1 (ENSEASG00005026430) #36	RAD51AP2 (ENSEASG00005009350) #37	CYRIA (ENSEASG00005009344)	MYCN (ENSEASG00005037158)
Horse	MODERN SPECIES	6	ENSECAG00000033565	ENSECAG00000038636	ENSECAG00000032306	ENSECAG00000034152	TDRD15 (ENSECAG00000008581) #12	APOB (ENSECAG00000008600) #13	LDAH (ENSECAG00000020412) #14	ENSECAG00000058266	GDF7 (ENSECAG00000021083) #15	HS1BP3 (ENSECAG00000021502) #16	RHOB (ENSECAG00000051165) #17	ENSECAG00000032315	ENSECAG00000021922 #19	PUM2 (ENSECAG00000021930) #20	ENSECAG00000045674	SDC1 (ENSECAG00000014709) #22	MATN3 (ENSECAG00000017085)	WDR35 (ENSECAG00000018258) #24	TTC32 (ENSECAG00000013048) #25	OSR1 (ENSECAG00000013593) #26	NT5C1B (ENSECAG00000014033) #27	RDH14 (ENSECAG00000045905) #28	KCNS3 (ENSECAG00000019779) #30	MSGN1 (ENSECAG00000002724) #31	GEN1 (ENSECAG00000020295) #33	SMC6 (ENSECAG00000022265)	VSNL1 (ENSECAG00000013682) #36	RAD51AP2 (ENSECAG00000014706) #37	CYRIA (ENSECAG00000014952)	ENSECAG00000018361	MYCN (ENSECAG00000002896)
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000161217	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00940000161217	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00940000161217	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00390000017067	ENSGT00940000161217	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00950000185985
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00390000017067	ENSGT00940000161217	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Beluga whale	MODERN SPECIES	37	TP53I3 (ENSDLEG00000003236)	SF3B6 (ENSDLEG00000003252)	FKBP1B (ENSDLEG00000003261)	WDCP (ENSDLEG00000003277)	MFSD2B (ENSDLEG00000003286) #7	UBXN2A (ENSDLEG00000003355) #8	ENSDLEG00000003368 #9	ENSDLEG00000003376 #9	KLHL29 (ENSDLEG00000003396) #11	APOB (ENSDLEG00000003485) #13	LDAH (ENSDLEG00000003656) #14	GDF7 (ENSDLEG00000003664) #15	HS1BP3 (ENSDLEG00000003696) #16	RHOB (ENSDLEG00000003706) #17	PUM2 (ENSDLEG00000003713) #20	SDC1 (ENSDLEG00000003726) #22	LAPTM4A (ENSDLEG00000003732) #23	MATN3 (ENSDLEG00000003741)	WDR35 (ENSDLEG00000003761) #24	TTC32 (ENSDLEG00000003795) #25	ENSDLEG00000003800	OSR1 (ENSDLEG00000003804) #26	NT5C1B (ENSDLEG00000003811) #27	RDH14 (ENSDLEG00000003827) #28	KCNS3 (ENSDLEG00000003837) #30	MSGN1 (ENSDLEG00000003842) #31	GEN1 (ENSDLEG00000003850) #33	SMC6 (ENSDLEG00000003874)	VSNL1 (ENSDLEG00000003903) #36	RAD51AP2 (ENSDLEG00000003910) #37	FAM49A (ENSDLEG00000003918)
Narwhal	MODERN SPECIES	305	PFN4 (ENSMMNG00015008611)	TP53I3 (ENSMMNG00015008625)	SF3B6 (ENSMMNG00015008636)	FKBP1B (ENSMMNG00015008655)	WDCP (ENSMMNG00015008672)	MFSD2B (ENSMMNG00015008694) #7	UBXN2A (ENSMMNG00015008718) #8	ATAD2B (ENSMMNG00015008735) #9	KLHL29 (ENSMMNG00015008756) #11	APOB (ENSMMNG00015008780) #13	LDAH (ENSMMNG00015008820) #14	GDF7 (ENSMMNG00015008839) #15	HS1BP3 (ENSMMNG00015008848) #16	RHOB (ENSMMNG00015008862) #17	PUM2 (ENSMMNG00015008879) #20	SDC1 (ENSMMNG00015005397) #22	LAPTM4A (ENSMMNG00015005414) #23	MATN3 (ENSMMNG00015005436)	WDR35 (ENSMMNG00015005480) #24	TTC32 (ENSMMNG00015005504) #25	OSR1 (ENSMMNG00015005525) #26	NT5C1B (ENSMMNG00015005540) #27	RDH14 (ENSMMNG00015005575) #28	KCNS3 (ENSMMNG00015005585) #30	MSGN1 (ENSMMNG00015005600) #31	GEN1 (ENSMMNG00015005619) #33	SMC6 (ENSMMNG00015005666)	VSNL1 (ENSMMNG00015005727) #36	RAD51AP2 (ENSMMNG00015005739) #37	CYRIA (ENSMMNG00015005774)	ENSMMNG00015005789
Vaquita	MODERN SPECIES	4	FAM228B (ENSPSNG00000006789)	TP53I3 (ENSPSNG00000006747)	SF3B6 (ENSPSNG00000006711)	FKBP1B (ENSPSNG00000006673)	WDCP (ENSPSNG00000006641)	MFSD2B (ENSPSNG00000006537) #7	UBXN2A (ENSPSNG00000006489) #8	ATAD2B (ENSPSNG00000006447) #9	KLHL29 (ENSPSNG00000006365) #11	APOB (ENSPSNG00000006093) #13	LDAH (ENSPSNG00000005977) #14	GDF7 (ENSPSNG00000005912) #15	HS1BP3 (ENSPSNG00000005889) #16	RHOB (ENSPSNG00000005853) #17	PUM2 (ENSPSNG00000005720) #20	SDC1 (ENSPSNG00000005664) #22	LAPTM4A (ENSPSNG00000005648) #23	MATN3 (ENSPSNG00000005606)	WDR35 (ENSPSNG00000005538) #24	TTC32 (ENSPSNG00000005497) #25	OSR1 (ENSPSNG00000005478) #26	NT5C1B (ENSPSNG00000005430) #27	RDH14 (ENSPSNG00000005407) #28	KCNS3 (ENSPSNG00000005395) #30	MSGN1 (ENSPSNG00000005383) #31	GEN1 (ENSPSNG00000005368) #33	SMC6 (ENSPSNG00000005297)	VSNL1 (ENSPSNG00000005265) #36	RAD51AP2 (ENSPSNG00000005244) #37	CYRIA (ENSPSNG00000005208)	ENSPSNG00000005190
Dolphin	MODERN SPECIES	4592															PUM2 (ENSTTRG00000004887) #20	SDC1 (ENSTTRG00000004870) #22
Sperm whale	MODERN SPECIES	1172																SDC1 (ENSPCTG00005018750) #22
Blue whale	MODERN SPECIES	4	FKBP1B (ENSBMSG00010013149)	WDCP (ENSBMSG00010013158)	MFSD2B (ENSBMSG00010013171) #7	UBXN2A (ENSBMSG00010013209) #8	ENSBMSG00010013222	ATAD2B (ENSBMSG00010013251) #9	KLHL29 (ENSBMSG00010013307) #11	ENSBMSG00010013332	ENSBMSG00010013370 #13	LDAH (ENSBMSG00010013418) #14	GDF7 (ENSBMSG00010013453) #15	HS1BP3 (ENSBMSG00010013470) #16	RHOB (ENSBMSG00010013496) #17	PUM2 (ENSBMSG00010013534) #20	ENSBMSG00010013651	SDC1 (ENSBMSG00010013669) #22	LAPTM4A (ENSBMSG00010013698) #23	MATN3 (ENSBMSG00010013735)	WDR35 (ENSBMSG00010013819) #24	TTC32 (ENSBMSG00010014051) #25	OSR1 (ENSBMSG00010014098) #26	NT5C1B (ENSBMSG00010014150) #27	RDH14 (ENSBMSG00010014286) #28	KCNS3 (ENSBMSG00010014305) #30	MSGN1 (ENSBMSG00010014319) #31	ENSBMSG00010014350 #33	SMC6 (ENSBMSG00010014555)	ENSBMSG00010014894	VSNL1 (ENSBMSG00010014927) #36	CYRIA (ENSBMSG00010015112)	MYCN (ENSBMSG00010015182)
Pecora	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT01010000230154	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Percora_a	ANCESTRAL SPECIES	13	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT01010000230154	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Bovidae	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT01010000230154	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181.e #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
American bison	MODERN SPECIES	3068	FKBP1B (ENSBBBG00000004715)	WDCP (ENSBBBG00000018782)	MFSD2B (ENSBBBG00000004782) #7	UBXN2A (ENSBBBG00000018929) #8	ATAD2B (ENSBBBG00000018952) #9	KLHL29 (ENSBBBG00000019026) #11	ENSBBBG00000004864	ENSBBBG00000004865	TDRD15 (ENSBBBG00000004866) #12	APOB (ENSBBBG00000019104) #13	LDAH (ENSBBBG00000019145) #14	HS1BP3 (ENSBBBG00000019208) #16	RHOB (ENSBBBG00000019223) #17	ENSBBBG00000019228 #19	PUM2 (ENSBBBG00000019297) #20	SDC1 (ENSBBBG00000009171) #22	LAPTM4A (ENSBBBG00000007183) #23	MATN3 (ENSBBBG00000019335)	WDR35 (ENSBBBG00000007319) #24	TTC32 (ENSBBBG00000006785) #25	OSR1 (ENSBBBG00000019430) #26	NT5C1B (ENSBBBG00000009192) #27	ENSBBBG00000019450 #28	KCNS3 (ENSBBBG00000019452) #30	MSGN1 (ENSBBBG00000005230) #31	GEN1 (ENSBBBG00000005250) #33	SMC6 (ENSBBBG00000019549)	VSNL1 (ENSBBBG00000005304) #36	RAD51AP2 (ENSBBBG00000005308) #37
Bos	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT01030000234916.g.a	ENSGT00550000074784.a.b	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181.e #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Bos_a	ANCESTRAL SPECIES	6	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00550000074784.a.b	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181.e #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Wild yak	MODERN SPECIES	752	MFSD2B (ENSBMUG00000006096) #7	UBXN2A (ENSBMUG00000006075) #8	ATAD2B (ENSBMUG00000006045) #9	KLHL29 (ENSBMUG00000005980) #11	ENSBMUG00000005963	ENSBMUG00000005951	ENSBMUG00000005946	ENSBMUG00000005934	TDRD15 (ENSBMUG00000005920) #12	APOB (ENSBMUG00000005903) #13	LDAH (ENSBMUG00000005822) #14	HS1BP3 (ENSBMUG00000005770) #16	RHOB (ENSBMUG00000005721) #17	ENSBMUG00000005710 #19	PUM2 (ENSBMUG00000005650) #20	SDC1 (ENSBMUG00000005608) #22	LAPTM4A (ENSBMUG00000005607) #23	MATN3 (ENSBMUG00000005603)	WDR35 (ENSBMUG00000005571) #24	ENSBMUG00000005524	OSR1 (ENSBMUG00000005507) #26	NT5C1B (ENSBMUG00000005486) #27
Domestic yak	MODERN SPECIES	28	WDCP (ENSBGRG00000019427)	MFSD2B (ENSBGRG00000019458) #7	UBXN2A (ENSBGRG00000019653) #8	ATAD2B (ENSBGRG00000019718) #9	KLHL29 (ENSBGRG00000019818) #11	ENSBGRG00000019916	TDRD15 (ENSBGRG00000019929) #12	ENSBGRG00000019965 #13	LDAH (ENSBGRG00000020053) #14	GDF7 (ENSBGRG00000020284) #15	HS1BP3 (ENSBGRG00000020332) #16	RHOB (ENSBGRG00000020410) #17	ENSBGRG00000020423 #17	ENSBGRG00000020441 #19	PUM2 (ENSBGRG00000020491) #20	SDC1 (ENSBGRG00000020622) #22	MATN3 (ENSBGRG00000020733)	WDR35 (ENSBGRG00000020967) #24	TTC32 (ENSBGRG00000021780) #25	ENSBGRG00000021825	OSR1 (ENSBGRG00000021840) #26	NT5C1B (ENSBGRG00000021877) #27	ENSBGRG00000021977 #28	KCNS3 (ENSBGRG00000022008) #30	MSGN1 (ENSBGRG00000022021) #31	GEN1 (ENSBGRG00000022034) #33	SMC6 (ENSBGRG00000022073)	VSNL1 (ENSBGRG00000022276) #36	RAD51AP2 (ENSBGRG00000022307) #37	CYRIA (ENSBGRG00000022323)	ENSBGRG00000022487
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT01030000234916.g.a.a	ENSGT00550000074784.a.b	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.b.b	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181.e #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b
Cow	MODERN SPECIES	2	WDCP (ENSBTAG00000016987)	MFSD2B (ENSBTAG00000002034) #7	UBXN2A (ENSBTAG00000002033) #8	ATAD2B (ENSBTAG00000017255) #9	KLHL29 (ENSBTAG00000021969) #11	ENSBTAG00000004565	ENSBTAG00000054991	ENSBTAG00000030834	TDRD15 (ENSBTAG00000051889) #12	APOB (ENSBTAG00000008505) #13	LDAH (ENSBTAG00000031014) #14	GDF7 (ENSBTAG00000038224) #15	HS1BP3 (ENSBTAG00000015490) #16	ENSBTAG00000049117 #19	PUM2 (ENSBTAG00000011155) #20	SDC1 (ENSBTAG00000011154) #22	LAPTM4A (ENSBTAG00000020894) #23	ENSBTAG00000052052	MATN3 (ENSBTAG00000020893)	WDR35 (ENSBTAG00000051164) #24	TTC32 (ENSBTAG00000015587) #25	OSR1 (ENSBTAG00000008113) #26	NT5C1B (ENSBTAG00000005270) #27	RDH14 (ENSBTAG00000023928) #28	MSGN1 (ENSBTAG00000039113) #31	GEN1 (ENSBTAG00000020059) #33	SMC6 (ENSBTAG00000018256)	VSNL1 (ENSBTAG00000017158) #36	RAD51AP2 (ENSBTAG00000037812) #37	CYRIA (ENSBTAG00000012779)	MYCN (ENSBTAG00000023372)
Hybrid Bos Indicus	MODERN SPECIES	2	ATAD2B (ENSBIXG00005026503) #9	ENSBIXG00005026418	KLHL29 (ENSBIXG00005004508) #11	ENSBIXG00005026267	ENSBIXG00005026241	ENSBIXG00005005602	ENSBIXG00005026182	TDRD15 (ENSBIXG00005026149) #12	APOB (ENSBIXG00005006700) #13	LDAH (ENSBIXG00005026010) #14	GDF7 (ENSBIXG00005025857) #15	HS1BP3 (ENSBIXG00005025838) #16	RHOB (ENSBIXG00005004398) #17	ENSBIXG00005025762 #19	PUM2 (ENSBIXG00005004375) #20	SDC1 (ENSBIXG00005004335) #22	LAPTM4A (ENSBIXG00005025436) #23	ENSBIXG00005025414	MATN3 (ENSBIXG00005006070)	WDR35 (ENSBIXG00005025304) #24	TTC32 (ENSBIXG00005025110) #25	ENSBIXG00005025042 #26	NT5C1B (ENSBIXG00005025000) #27	RDH14 (ENSBIXG00005024953) #28	KCNS3 (ENSBIXG00005024916) #30	MSGN1 (ENSBIXG00005024894) #31	GEN1 (ENSBIXG00005024882) #33	SMC6 (ENSBIXG00005004235)	VSNL1 (ENSBIXG00005024708) #36	RAD51AP2 (ENSBIXG00005024673) #37	CYRIA (ENSBIXG00005024640)
Caprinae	ANCESTRAL SPECIES	9	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT01010000230154	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Goat	MODERN SPECIES	2	MFSD2B (ENSCHIG00000015093) #7	UBXN2A (ENSCHIG00000008772) #8	ATAD2B (ENSCHIG00000016699) #9	KLHL29 (ENSCHIG00000021081) #11	ENSCHIG00000013040	TDRD15 (ENSCHIG00000024751) #12	APOB (ENSCHIG00000016651) #13	LDAH (ENSCHIG00000013047) #14	ENSCHIG00000024630	GDF7 (ENSCHIG00000011381) #15	HS1BP3 (ENSCHIG00000026302) #16	RHOB (ENSCHIG00000012713) #17	ENSCHIG00000018368 #19	PUM2 (ENSCHIG00000022180) #20	ENSCHIG00000025915 #21	SDC1 (ENSCHIG00000018782) #22	LAPTM4A (ENSCHIG00000022265) #23	MATN3 (ENSCHIG00000018061)	WDR35 (ENSCHIG00000006588) #24	TTC32 (ENSCHIG00000025091) #25	OSR1 (ENSCHIG00000020202) #26	NT5C1B (ENSCHIG00000026605) #27	ENSCHIG00000027201 #28	KCNS3 (ENSCHIG00000012986) #30	MSGN1 (ENSCHIG00000010365) #31	GEN1 (ENSCHIG00000013888) #33	SMC6 (ENSCHIG00000010144)	VSNL1 (ENSCHIG00000006913) #36	CYRIA (ENSCHIG00000018672)	MYCN (ENSCHIG00000017882)	DDX1 (ENSCHIG00000011046)
Rambouillet Sheep	MODERN SPECIES	19	MFSD2B (ENSOARG00020019757) #7	UBXN2A (ENSOARG00020019662) #8	ENSOARG00020019629	ATAD2B (ENSOARG00020019344) #9	KLHL29 (ENSOARG00020019264) #11	ENSOARG00020019210	ENSOARG00020019194	TDRD15 (ENSOARG00020019143) #12	ENSOARG00020018981 #13	ENSOARG00020018924	LDAH (ENSOARG00020018657) #14	GDF7 (ENSOARG00020018622) #15	HS1BP3 (ENSOARG00020018571) #16	RHOB (ENSOARG00020018495) #17	PUM2 (ENSOARG00020018298) #20	SDC1 (ENSOARG00020018247) #22	LAPTM4A (ENSOARG00020018198) #23	MATN3 (ENSOARG00020018018)	WDR35 (ENSOARG00020017694) #24	TTC32 (ENSOARG00020017652) #25	OSR1 (ENSOARG00020017609) #26	NT5C1B (ENSOARG00020017529) #27	RDH14 (ENSOARG00020017495) #28	KCNS3 (ENSOARG00020017454) #30	MSGN1 (ENSOARG00020017429) #31	SMC6 (ENSOARG00020016887)	VSNL1 (ENSOARG00020016837) #36	RAD51AP2 (ENSOARG00020016789) #37	FAM49A (ENSOARG00020016491)	ENSOARG00020016447	DDX1 (ENSOARG00020016090)
Siberian musk deer	MODERN SPECIES	239						ENSMMSG00000003169	TDRD15 (ENSMMSG00000003160) #12	APOB (ENSMMSG00000003055) #13	ENSMMSG00000003002	ENSMMSG00000002886 #14	GDF7 (ENSMMSG00000002860) #15	HS1BP3 (ENSMMSG00000002840) #16	RHOB (ENSMMSG00000002823) #17	ENSMMSG00000002810 #19	PUM2 (ENSMMSG00000002715) #20	SDC1 (ENSMMSG00000002684) #22	ENSMMSG00000002671	LAPTM4A (ENSMMSG00000002657) #23	MATN3 (ENSMMSG00000002615)	ENSMMSG00000002584	WDR35 (ENSMMSG00000002532) #24	TTC32 (ENSMMSG00000002503) #25	OSR1 (ENSMMSG00000002491) #26	NT5C1B (ENSMMSG00000002465) #27	RDH14 (ENSMMSG00000002449) #28	KCNS3 (ENSMMSG00000002436) #30	MSGN1 (ENSMMSG00000002419) #31	GEN1 (ENSMMSG00000002401) #33	SMC6 (ENSMMSG00000002375)	VSNL1 (ENSMMSG00000002354) #36	ENSMMSG00000002335
Yarkand deer	MODERN SPECIES	2	WDCP (ENSCHYG00000016368)	MFSD2B (ENSCHYG00000016413) #7	ENSCHYG00000016517 #8	ATAD2B (ENSCHYG00000016580) #9	KLHL29 (ENSCHYG00000017090) #11	ENSCHYG00000017476	TDRD15 (ENSCHYG00000017505) #12	APOB (ENSCHYG00000017558) #13	LDAH (ENSCHYG00000017844) #14	ENSCHYG00000005540	GDF7 (ENSCHYG00000005551) #15	HS1BP3 (ENSCHYG00000005568) #16	RHOB (ENSCHYG00000005587) #17	ENSCHYG00000005597 #19	PUM2 (ENSCHYG00000005651) #20	SDC1 (ENSCHYG00000005966) #22	LAPTM4A (ENSCHYG00000005989) #23	MATN3 (ENSCHYG00000006044)	WDR35 (ENSCHYG00000006261) #24	TTC32 (ENSCHYG00000006877) #25	OSR1 (ENSCHYG00000006938) #26	ENSCHYG00000006946	NT5C1B (ENSCHYG00000006961) #27	RDH14 (ENSCHYG00000007014) #28	KCNS3 (ENSCHYG00000007031) #30	MSGN1 (ENSCHYG00000007045) #31	GEN1 (ENSCHYG00000007066) #33	SMC6 (ENSCHYG00000007159)	VSNL1 (ENSCHYG00000007343) #36	RAD51AP2 (ENSCHYG00000007371) #37	CYRIA (ENSCHYG00000007408)
Camelidae	ANCESTRAL SPECIES	12	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00940000162581 #12	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT01090000263460	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Arabian camel	MODERN SPECIES	6	WDCP (ENSCDRG00005007980)	MFSD2B (ENSCDRG00005007767) #7	UBXN2A (ENSCDRG00005007692) #8	ATAD2B (ENSCDRG00005007580) #9	KLHL29 (ENSCDRG00005007511) #11	ENSCDRG00005007461	ENSCDRG00005007452	TDRD15 (ENSCDRG00005007436) #12	APOB (ENSCDRG00005005937) #13	ENSCDRG00005005813	LDAH (ENSCDRG00005005753) #14	HS1BP3 (ENSCDRG00005005637) #16	RHOB (ENSCDRG00005005629) #17	PUM2 (ENSCDRG00005005454) #20	ENSCDRG00005005424 #21	SDC1 (ENSCDRG00005005384) #22	ENSCDRG00005005168 #19	LAPTM4A (ENSCDRG00005005142) #23	MATN3 (ENSCDRG00005005117)	ENSCDRG00005005097 #24	TTC32 (ENSCDRG00005005072) #25	OSR1 (ENSCDRG00005005052) #26	NT5C1B (ENSCDRG00005005015) #27	RDH14 (ENSCDRG00005004999) #28	KCNS3 (ENSCDRG00005004986) #30	MSGN1 (ENSCDRG00005004972) #31	GEN1 (ENSCDRG00005004909) #33	SMC6 (ENSCDRG00005004835)	VSNL1 (ENSCDRG00005004814) #36	RAD51AP2 (ENSCDRG00005004783) #37	CYRIA (ENSCDRG00005004743)
Suina	ANCESTRAL SPECIES	13	ENSGT00940000161217	ENSGT00390000005908	ENSGT00940000153311.a.b.b	ENSGT00390000001660	ENSGT00390000005318.b.b.a #7	ENSGT00520000055567.a.b #8	ENSGT00550000074694.b #9	ENSGT00940000158824 #11	ENSGT00590000083139 #13	ENSGT00390000009688 #14	ENSGT00940000160140.b #15	ENSGT00390000013092 #16	ENSGT00950000182945.b.a.a.b.b.b #17	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581	ENSGT00940000155745 #24	ENSGT00390000011905 #25	ENSGT00940000158993 #26	ENSGT00390000017767.b.a #27	ENSGT00940000160181 #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #33	ENSGT00550000074816.A.a	ENSGT00940000156513 #36	ENSGT00470000042500 #37	ENSGT00390000015159.a.b	ENSGT00940000158432
Pig	MODERN SPECIES	11	ENSSSCG00000041783	ATAD2B (ENSSSCG00000008591) #9	ENSSSCG00000055154	KLHL29 (ENSSSCG00000008593) #11	ENSSSCG00000044002	ENSSSCG00000039066	ENSSSCG00000048838	APOB (ENSSSCG00000008595) #13	LDAH (ENSSSCG00000025357) #14	GDF7 (ENSSSCG00000028931) #15	HS1BP3 (ENSSSCG00000030115) #16	RHOB (ENSSSCG00000043781) #17	ENSSSCG00000008599 #19	ENSSSCG00000054581 #19	PUM2 (ENSSSCG00000008600) #20	SDC1 (ENSSSCG00000008601) #22	LAPTM4A (ENSSSCG00000008602) #23	MATN3 (ENSSSCG00000008603)	WDR35 (ENSSSCG00000008604) #24	TTC32 (ENSSSCG00000053616) #25	ENSSSCG00000058710	OSR1 (ENSSSCG00000060496) #26	ENSSSCG00000054495	NT5C1B (ENSSSCG00000008607) #27	RDH14 (ENSSSCG00000008608) #28	KCNS3 (ENSSSCG00000031905) #30	ENSSSCG00000040752	MSGN1 (ENSSSCG00000026538) #31	GEN1 (ENSSSCG00000008613) #33	SMC6 (ENSSSCG00000008614)	VSNL1 (ENSSSCG00000008615) #36
Chacoan peccary	MODERN SPECIES	776	TP53I3 (ENSCWAG00000004737)	SF3B6 (ENSCWAG00000004714)	FKBP1B (ENSCWAG00000004665)	WDCP (ENSCWAG00000004635)	MFSD2B (ENSCWAG00000004534) #7	UBXN2A (ENSCWAG00000004513) #8	ATAD2B (ENSCWAG00000004481) #9	KLHL29 (ENSCWAG00000004442) #11	APOB (ENSCWAG00000004185) #13	LDAH (ENSCWAG00000004087) #14	GDF7 (ENSCWAG00000004046) #15	HS1BP3 (ENSCWAG00000004014) #16	RHOB (ENSCWAG00000004001) #17	ENSCWAG00000003897 #19	PUM2 (ENSCWAG00000003696) #20	SDC1 (ENSCWAG00000016920) #22	LAPTM4A (ENSCWAG00000016902) #23	MATN3 (ENSCWAG00000016742)	WDR35 (ENSCWAG00000016523) #24	TTC32 (ENSCWAG00000016481) #25	OSR1 (ENSCWAG00000016456) #26	NT5C1B (ENSCWAG00000016386) #27	RDH14 (ENSCWAG00000016353) #28	KCNS3 (ENSCWAG00000016339) #30	MSGN1 (ENSCWAG00000016325) #31	GEN1 (ENSCWAG00000016234) #33	SMC6 (ENSCWAG00000016171)	VSNL1 (ENSCWAG00000016143) #36	RAD51AP2 (ENSCWAG00000016094) #37	CYRIA (ENSCWAG00000016027)	MYCN (ENSCWAG00000015961)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161171 #22
Hedgehog	MODERN SPECIES	1765																SDC1 (ENSEEUG00000012508) #22