Glires	ANCESTRAL SPECIES	13	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.cb
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.h.a #12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Hystricomorpha_a	ANCESTRAL SPECIES	31	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Guinea pig	MODERN SPECIES	18	FAM228B (ENSCPOG00000030306) #7	PFN4 (ENSCPOG00000009683) #8	SF3B6 (ENSCPOG00000008016) #9	FKBP1B (ENSCPOG00000039379) #10	WDCP (ENSCPOG00000019263) #11	MFSD2B (ENSCPOG00000022662) #12	UBXN2A (ENSCPOG00000038294) #13	ATAD2B (ENSCPOG00000014176) #14	KLHL29 (ENSCPOG00000014174) #15	APOB (ENSCPOG00000004931) #16	LDAH (ENSCPOG00000012586) #17	HS1BP3 (ENSCPOG00000000278) #18	ENSCPOG00000037907 #19	PUM2 (ENSCPOG00000031996) #20	ENSCPOG00000007075 #21	SDC1 (ENSCPOG00000008875) #22	LAPTM4A (ENSCPOG00000009690) #23	MATN3 (ENSCPOG00000004739) #24	WDR35 (ENSCPOG00000007053) #25	TTC32 (ENSCPOG00000033658) #26	OSR1 (ENSCPOG00000002025) #27	NT5C1B (ENSCPOG00000012761) #28	RDH14 (ENSCPOG00000022651) #29	KCNS3 (ENSCPOG00000009232) #30	MSGN1 (ENSCPOG00000003061) #31	GEN1 (ENSCPOG00000033894) #32	SMC6 (ENSCPOG00000014752) #33	VSNL1 (ENSCPOG00000030283) #34
Hystricomorpha_b	ANCESTRAL SPECIES	26	ENSGT00390000017067 #8	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Long-tailed chinchilla	MODERN SPECIES	176	FAM228B (ENSCLAG00000004984) #7	PFN4 (ENSCLAG00000004618) #8	SF3B6 (ENSCLAG00000014512) #9	FKBP1B (ENSCLAG00000011181) #10	WDCP (ENSCLAG00000008275) #11	MFSD2B (ENSCLAG00000014189) ##12	UBXN2A (ENSCLAG00000014610) #13	ATAD2B (ENSCLAG00000005215) #14	KLHL29 (ENSCLAG00000005598) #15	APOB (ENSCLAG00000008056) #16	LDAH (ENSCLAG00000011308) #17	HS1BP3 (ENSCLAG00000008832) #18	RHOB (ENSCLAG00000017801)	ENSCLAG00000005814 #19	PUM2 (ENSCLAG00000006048) #20	SDC1 (ENSCLAG00000007345) #22	LAPTM4A (ENSCLAG00000006983) #23	MATN3 (ENSCLAG00000006019) #24	WDR35 (ENSCLAG00000007929) #25	TTC32 (ENSCLAG00000009839) #26	OSR1 (ENSCLAG00000009423) #27	NT5C1B (ENSCLAG00000008659) #28	RDH14 (ENSCLAG00000009341) #29	KCNS3 (ENSCLAG00000013937) #30	MSGN1 (ENSCLAG00000015119) #31	GEN1 (ENSCLAG00000008865) #32	SMC6 (ENSCLAG00000012919) #33	VSNL1 (ENSCLAG00000011222) #34	ENSCLAG00000013272
Degu	MODERN SPECIES	60	ENSODEG00000009834 #14	ENSODEG00000008786	KLHL29 (ENSODEG00000009928) #15	ENSODEG00000007428	ENSODEG00000019450	ENSODEG00000007994	ENSODEG00000019494	APOB (ENSODEG00000008337) #16	ENSODEG00000008523 #17	GDF7 (ENSODEG00000008847)	HS1BP3 (ENSODEG00000010003) #18	RHOB (ENSODEG00000019841)	ENSODEG00000010362 #19	PUM2 (ENSODEG00000007823) #20	ENSODEG00000008774	SDC1 (ENSODEG00000010758) #22	LAPTM4A (ENSODEG00000008579) #23	MATN3 (ENSODEG00000008451) #24	WDR35 (ENSODEG00000012693) #25	TTC32 (ENSODEG00000009280) #26	OSR1 (ENSODEG00000008728) #27	NT5C1B (ENSODEG00000008929) #28	RDH14 (ENSODEG00000008458) #29	KCNS3 (ENSODEG00000009066) #30	ENSODEG00000019755	MSGN1 (ENSODEG00000009615) #31	GEN1 (ENSODEG00000010156) #32	SMC6 (ENSODEG00000008987) #33	VSNL1 (ENSODEG00000008555) #34	ENSODEG00000008159	SLC10A4 (ENSODEG00000010331)
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.cb
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a.u.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.cb
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a.u.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.cb
Squirrel	MODERN SPECIES	93	WDCP (ENSSTOG00000032257) #11	MFSD2B (ENSSTOG00000003123) ##12	UBXN2A (ENSSTOG00000030412) #13	ATAD2B (ENSSTOG00000021066) #14	KLHL29 (ENSSTOG00000008403) #15	ENSSTOG00000033132 #23	TDRD15 (ENSSTOG00000027567)	APOB (ENSSTOG00000027598) #16	LDAH (ENSSTOG00000026882) #17	GDF7 (ENSSTOG00000027110)	HS1BP3 (ENSSTOG00000004973) #18	ENSSTOG00000014644	ENSSTOG00000023326 #19	PUM2 (ENSSTOG00000006262) #20	ENSSTOG00000033291	SDC1 (ENSSTOG00000028519) #22	ENSSTOG00000007214 #23	MATN3 (ENSSTOG00000019530) #24	WDR35 (ENSSTOG00000007151) #25	TTC32 (ENSSTOG00000007140) #26	OSR1 (ENSSTOG00000015454) #27	NT5C1B (ENSSTOG00000014834) #28	RDH14 (ENSSTOG00000021114) #29	KCNS3 (ENSSTOG00000012420) #30	MSGN1 (ENSSTOG00000013981) #31	GEN1 (ENSSTOG00000013963) #32	SMC6 (ENSSTOG00000013946) #33	VSNL1 (ENSSTOG00000010438) #34	ENSSTOG00000025212	CYRIA (ENSSTOG00000022187)	MYCN (ENSSTOG00000012252)
Arctic ground squirrel	MODERN SPECIES		UBXN2A (ENSUPAG00010008734) #13	ATAD2B (ENSUPAG00010008759) #14	KLHL29 (ENSUPAG00010008812) #15	ENSUPAG00010008883	TDRD15 (ENSUPAG00010008953)	APOB (ENSUPAG00010008961) #16	LDAH (ENSUPAG00010009007) #17	ENSUPAG00010009042	ENSUPAG00010009055	HS1BP3 (ENSUPAG00010009063) #18	RHOB (ENSUPAG00010009084)	ENSUPAG00010009092 #19	PUM2 (ENSUPAG00010009123) #20	ENSUPAG00010009301 #21	ENSUPAG00010009303	SDC1 (ENSUPAG00010009310) #22	LAPTM4A (ENSUPAG00010009333) #23	MATN3 (ENSUPAG00010009339) #24	WDR35 (ENSUPAG00010009354) #25	TTC32 (ENSUPAG00010009436) #26	OSR1 (ENSUPAG00010009451) #27	ENSUPAG00010009474 #28	RDH14 (ENSUPAG00010009546) #29	MSGN1 (ENSUPAG00010009556) #31	GEN1 (ENSUPAG00010009557) #32	SMC6 (ENSUPAG00010009564) #33	VSNL1 (ENSUPAG00010009655) #34	RAD51AP2 (ENSUPAG00010009663)	CYRIA (ENSUPAG00010009668)	MYCN (ENSUPAG00010009702)	ENSUPAG00010009708
Alpin marmot	MODERN SPECIES	6	FKBP1B (ENSMMMG00000021830) #10	WDCP (ENSMMMG00000021855) #11	MFSD2B (ENSMMMG00000021873) ##12	ENSMMMG00000021893	ATAD2B (ENSMMMG00000021898) #14	KLHL29 (ENSMMMG00000022005) #15	TDRD15 (ENSMMMG00000022048)	ENSMMMG00000022049 #16	ENSMMMG00000022059 #16	LDAH (ENSMMMG00000022060) #17	HS1BP3 (ENSMMMG00000022083) #18	RHOB (ENSMMMG00000022086)	ENSMMMG00000022089 #19	PUM2 (ENSMMMG00000022116) #20	ENSMMMG00000022129 #21	SDC1 (ENSMMMG00000022131) #22	LAPTM4A (ENSMMMG00000022160) #23	MATN3 (ENSMMMG00000022186) #24	WDR35 (ENSMMMG00000022195) #25	TTC32 (ENSMMMG00000022212) #26	OSR1 (ENSMMMG00000022239) #27	ENSMMMG00000022251 #28	RDH14 (ENSMMMG00000022280) #29	KCNS3 (ENSMMMG00000022292) #30	MSGN1 (ENSMMMG00000022303) #31	GEN1 (ENSMMMG00000022304) #32	SMC6 (ENSMMMG00000022309) #33	VSNL1 (ENSMMMG00000022330) #34	RAD51AP2 (ENSMMMG00000022347)	CYRIA (ENSMMMG00000022371)	ENSMMMG00000022385
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005023387 #9	FKBP1B (ENSSVLG00005023436) #10	WDCP (ENSSVLG00005023512) #11	MFSD2B (ENSSVLG00005023554) ##12	ENSSVLG00005023695 #13	ATAD2B (ENSSVLG00005023756) #14	KLHL29 (ENSSVLG00005023916) #15	TDRD15 (ENSSVLG00005023954)	APOB (ENSSVLG00005023994) #16	LDAH (ENSSVLG00005024216) #17	GDF7 (ENSSVLG00005024288)	HS1BP3 (ENSSVLG00005024304) #18	RHOB (ENSSVLG00005024328)	ENSSVLG00005024370 #19	ENSSVLG00005024506 #20	SDC1 (ENSSVLG00005024647) #22	LAPTM4A (ENSSVLG00005024670) #23	MATN3 (ENSSVLG00005024711) #24	WDR35 (ENSSVLG00005024826) #25	TTC32 (ENSSVLG00005024889) #26	OSR1 (ENSSVLG00005024914) #27	NT5C1B (ENSSVLG00005025002) #28	RDH14 (ENSSVLG00005025062) #29	ENSSVLG00005025079	KCNS3 (ENSSVLG00005025089) #30	MSGN1 (ENSSVLG00005025107) #31	GEN1 (ENSSVLG00005025123) #32	SMC6 (ENSSVLG00005025164) #33	VSNL1 (ENSSVLG00005025182) #34	RAD51AP2 (ENSSVLG00005025196)	ENSSVLG00005025209
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000017067 #8	ENSGT00940000161217	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00590000083139 #16	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Chinese hamster chok1gshd	MODERN SPECIES	229	Wdcp (ENSCGRG00001019012) #11	Mfsd2b (ENSCGRG00001024664) ##12	Ubxn2a (ENSCGRG00001007449) #13	Atad2b (ENSCGRG00001016996) #14	ENSCGRG00001012412	Klhl29 (ENSCGRG00001018377) #15	ENSCGRG00001024957	ENSCGRG00001024983	Apob (ENSCGRG00001009990) #16	Gdf7 (ENSCGRG00001002115)	ENSCGRG00001012418 #17	Hs1bp3 (ENSCGRG00001015945) #18	Rhob (ENSCGRG00001001843)	Slc7a15 (ENSCGRG00001018113) #19	Pum2 (ENSCGRG00001025023) #20	SDC1 (ENSCGRG00001018173) #22	Laptm4a (ENSCGRG00001021474) #23	Matn3 (ENSCGRG00001025049) #24	Wdr35 (ENSCGRG00001004220) #25	Ttc32 (ENSCGRG00001007763) #26	Osr1 (ENSCGRG00001009653) #27	Nt5c1b (ENSCGRG00001016775) #28	Rdh14 (ENSCGRG00001024177) #29	ENSCGRG00001006912	Kcns3 (ENSCGRG00001004289) #30	Msgn1 (ENSCGRG00001003369) #31	ENSCGRG00001019699 #32	Smc6 (ENSCGRG00001024287) #33	Vsnl1 (ENSCGRG00001017035) #34	ENSCGRG00001012128	Cyria (ENSCGRG00001014064)
Golden Hamster	MODERN SPECIES	705	Fam228a (ENSMAUG00000019010) ##7	Fam228b (ENSMAUG00000017259) #7	ENSMAUG00000004078	ENSMAUG00000000586 #9	Fkbp1b (ENSMAUG00000016519) #10	Wdcp (ENSMAUG00000013564) #11	Ubxn2a (ENSMAUG00000013894) #13	ENSMAUG00000016676 #14	Klhl29 (ENSMAUG00000015607) #15	Apob (ENSMAUG00000010835) #16	Gdf7 (ENSMAUG00000011905)	Hs1bp3 (ENSMAUG00000010929) #18	Rhob (ENSMAUG00000016245)	Slc7a15 (ENSMAUG00000008328) #19	Pum2 (ENSMAUG00000000311) #20	Sdc1 (ENSMAUG00000007825) #22	Laptm4a (ENSMAUG00000002092) #23	Matn3 (ENSMAUG00000000731) #24	Wdr35 (ENSMAUG00000017485) #25	Ttc32 (ENSMAUG00000018447) #26	Osr1 (ENSMAUG00000008188) #27	Nt5c1b (ENSMAUG00000018395) #28	Rdh14 (ENSMAUG00000016192) #29	Kcns3 (ENSMAUG00000017875) #30	Msgn1 (ENSMAUG00000016000) #31	Smc6 (ENSMAUG00000016007) #33	Vsnl1 (ENSMAUG00000014300) #34	Rad51ap2 (ENSMAUG00000015167)	ENSMAUG00000000527	Cyria (ENSMAUG00000000089)	Mycn (ENSMAUG00000017079)
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Prairie vole	MODERN SPECIES	353	Wdcp (ENSMOCG00000013612) #11	Mfsd2b (ENSMOCG00000012318) ##12	Ubxn2a (ENSMOCG00000020669) #13	Atad2b (ENSMOCG00000000408) #14	Klhl29 (ENSMOCG00000007430) #15	ENSMOCG00000012724	ENSMOCG00000013271	ENSMOCG00000002216	Apob (ENSMOCG00000021753) #16	Gdf7 (ENSMOCG00000010905)	ENSMOCG00000021323	Hs1bp3 (ENSMOCG00000022226) #18	Rhob (ENSMOCG00000007966)	Slc7a15 (ENSMOCG00000003687) #19	Pum2 (ENSMOCG00000013663) #20	Sdc1 (ENSMOCG00000019532) #22	ENSMOCG00000012688	Laptm4a (ENSMOCG00000013181) #23	Matn3 (ENSMOCG00000013872) #24	Wdr35 (ENSMOCG00000001393) #25	Ttc32 (ENSMOCG00000021911) #26	ENSMOCG00000007598	Osr1 (ENSMOCG00000012793) #27	ENSMOCG00000013225	Nt5c1b (ENSMOCG00000020580) #28	Rdh14 (ENSMOCG00000005865) #29	Kcns3 (ENSMOCG00000007505) #30	Tacstd2 (ENSMOCG00000008197)	Il23r (ENSMOCG00000010821)	Il12rb2 (ENSMOCG00000022701)	Serbp1 (ENSMOCG00000015573)
Northern American deer mouse	MODERN SPECIES	14	Fkbp1b (ENSPEMG00000028047) #10	Wdcp (ENSPEMG00000011326) #11	Mfsd2b (ENSPEMG00000014144) ##12	ENSPEMG00000017582 #13	Atad2b (ENSPEMG00000010515) #14	ENSPEMG00000025296	Klhl29 (ENSPEMG00000012938) #15	ENSPEMG00000029395	Apob (ENSPEMG00000018913) #16	ENSPEMG00000019039 #17	Hs1bp3 (ENSPEMG00000001400) #18	Rhob (ENSPEMG00000013485)	Slc7a15 (ENSPEMG00000009942) #19	Pum2 (ENSPEMG00000008357) #20	ENSPEMG00000024635 #21	Sdc1 (ENSPEMG00000010998) #22	Laptm4a (ENSPEMG00000015789) #23	Matn3 (ENSPEMG00000017106) #24	Wdr35 (ENSPEMG00000004790) #25	Ttc32 (ENSPEMG00000027871) #26	Osr1 (ENSPEMG00000008344) #27	Nt5c1b (ENSPEMG00000013187) #28	Rdh14 (ENSPEMG00000018416) #29	ENSPEMG00000000184	ENSPEMG00000025389	Kcns3 (ENSPEMG00000011462) #30	ENSPEMG00000007987	Msgn1 (ENSPEMG00000007522) #31	Gen1 (ENSPEMG00000001855) #32	ENSPEMG00000024461 #33	Vsnl1 (ENSPEMG00000028838) #34
Murinae	ANCESTRAL SPECIES	8	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Mus	ANCESTRAL SPECIES	10	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Mus_A	ANCESTRAL SPECIES	17	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Mus_B	ANCESTRAL SPECIES	17	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Mouse	MODERN SPECIES	3	Pfn4 (ENSMUSG00000020639) #8	Sf3b6 (ENSMUSG00000037361) #9	Fkbp1b (ENSMUSG00000020635) #10	Wdcp (ENSMUSG00000051721) #11	Mfsd2b (ENSMUSG00000037336) ##12	Ubxn2a (ENSMUSG00000020634) #13	Atad2b (ENSMUSG00000052812) #14	Klhl29 (ENSMUSG00000020627) #15	Apob (ENSMUSG00000020609) #16	Ldah (ENSMUSG00000037669) #17	Gdf7 (ENSMUSG00000037660)	Hs1bp3 (ENSMUSG00000020605) #18	Rhob (ENSMUSG00000054364)	Slc7a15 (ENSMUSG00000020600) #19	Pum2 (ENSMUSG00000020594) #20	Sdc1 (ENSMUSG00000020592) #22	Laptm4a (ENSMUSG00000020585) #23	Matn3 (ENSMUSG00000020583) #24	Wdr35 (ENSMUSG00000066643) #25	Ttc32 (ENSMUSG00000066637) #26	Osr1 (ENSMUSG00000048387) #27	Nt5c1b (ENSMUSG00000020622) #28	Rdh14 (ENSMUSG00000020621) #29	Kcns3 (ENSMUSG00000043673) #30	Msgn1 (ENSMUSG00000047002) #31	Gen1 (ENSMUSG00000051235) #32	Smc6 (ENSMUSG00000020608) #33	Vsnl1 (ENSMUSG00000054459) #34	Rad51ap2 (ENSMUSG00000086022)	Cyria (ENSMUSG00000020589)	Mycn (ENSMUSG00000037169)
Mus_C	ANCESTRAL SPECIES	11	ENSGT00390000005908 #9	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.g ##12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432.bb.a
Steppe mouse	MODERN SPECIES	68															Pum2 (ENSMSIG00000004171) #20	Sdc1 (ENSMSIG00000004134) #22	ENSMSIG00000004066 #23	Matn3 (ENSMSIG00000004029) #24	Wdr35 (ENSMSIG00000003728) #25	Ttc32 (ENSMSIG00000003695) #26	ENSMSIG00000003661
spretus	MODERN SPECIES	3	Pfn4 (MGP_SPRETEiJ_G0018433) #8	Sf3b6 (MGP_SPRETEiJ_G0018434) #9	Fkbp1b (MGP_SPRETEiJ_G0018435) #10	Wdcp (MGP_SPRETEiJ_G0018436) #11	Mfsd2b (MGP_SPRETEiJ_G0018437) ##12	Ubxn2a (MGP_SPRETEiJ_G0018438) #13	Atad2b (MGP_SPRETEiJ_G0018439) #14	Klhl29 (MGP_SPRETEiJ_G0018440) #15	Apob (MGP_SPRETEiJ_G0018441) #16	Ldah (MGP_SPRETEiJ_G0018442) #17	Gdf7 (MGP_SPRETEiJ_G0018443)	Hs1bp3 (MGP_SPRETEiJ_G0018444) #18	Rhob (MGP_SPRETEiJ_G0018445)	Slc7a15 (MGP_SPRETEiJ_G0018446) #19	Pum2 (MGP_SPRETEiJ_G0018447) #20	Sdc1 (MGP_SPRETEiJ_G0018448) #22	MGP_SPRETEiJ_G0018449 #23	Matn3 (MGP_SPRETEiJ_G0018450) #24	Wdr35 (MGP_SPRETEiJ_G0018451) #25	Ttc32 (MGP_SPRETEiJ_G0018452) #26	Osr1 (MGP_SPRETEiJ_G0018453) #27	Nt5c1b (MGP_SPRETEiJ_G0018454) #28	Rdh14 (MGP_SPRETEiJ_G0018455) #29	Kcns3 (MGP_SPRETEiJ_G0018456) #30	Msgn1 (MGP_SPRETEiJ_G0018457) #31	Gen1 (MGP_SPRETEiJ_G0018458) #32	Smc6 (MGP_SPRETEiJ_G0018459) #33	Vsnl1 (MGP_SPRETEiJ_G0018460) #34	Rad51ap2 (MGP_SPRETEiJ_G0018461)	Cyria (MGP_SPRETEiJ_G0018462)	Mycn (MGP_SPRETEiJ_G0018463)
Ryukyu mouse	MODERN SPECIES	3	Pfn4 (MGP_CAROLIEiJ_G0017589) #8	Sf3b6 (MGP_CAROLIEiJ_G0017590) #9	Fkbp1b (MGP_CAROLIEiJ_G0017591) #10	Wdcp (MGP_CAROLIEiJ_G0017592) #11	Mfsd2b (MGP_CAROLIEiJ_G0017593) ##12	MGP_CAROLIEiJ_G0017594 #13	MGP_CAROLIEiJ_G0017595 #14	Klhl29 (MGP_CAROLIEiJ_G0017596) #15	Apob (MGP_CAROLIEiJ_G0017597) #16	Ldah (MGP_CAROLIEiJ_G0017598) #17	Gdf7 (MGP_CAROLIEiJ_G0017599)	Hs1bp3 (MGP_CAROLIEiJ_G0017600) #18	Rhob (MGP_CAROLIEiJ_G0017601)	Slc7a15 (MGP_CAROLIEiJ_G0017602) #19	Pum2 (MGP_CAROLIEiJ_G0017603) #20	Sdc1 (MGP_CAROLIEiJ_G0017604) #22	MGP_CAROLIEiJ_G0017605 #23	Matn3 (MGP_CAROLIEiJ_G0017606) #24	Wdr35 (MGP_CAROLIEiJ_G0017607) #25	Ttc32 (MGP_CAROLIEiJ_G0017608) #26	Osr1 (MGP_CAROLIEiJ_G0017609) #27	Nt5c1b (MGP_CAROLIEiJ_G0017610) #28	Rdh14 (MGP_CAROLIEiJ_G0017611) #29	Kcns3 (MGP_CAROLIEiJ_G0017612) #30	Vmn1r200 (MGP_CAROLIEiJ_G0017613)	MGP_CAROLIEiJ_G0017614	Msgn1 (MGP_CAROLIEiJ_G0017615) #31	Gen1 (MGP_CAROLIEiJ_G0017616) #32	Smc6 (MGP_CAROLIEiJ_G0017617) #33	Vsnl1 (MGP_CAROLIEiJ_G0017618) #34	Rad51ap2 (MGP_CAROLIEiJ_G0017619)
Shrew mouse	MODERN SPECIES	20	Pfn4 (MGP_PahariEiJ_G0029347) #8	Sf3b6 (MGP_PahariEiJ_G0029348) #9	Fkbp1b (MGP_PahariEiJ_G0029349) #10	Wdcp (MGP_PahariEiJ_G0029350) #11	Mfsd2b (MGP_PahariEiJ_G0029351) ##12	Ubxn2a (MGP_PahariEiJ_G0029352) #13	Atad2b (MGP_PahariEiJ_G0029353) #14	Klhl29 (MGP_PahariEiJ_G0029354) #15	Apob (MGP_PahariEiJ_G0029355) #16	Ldah (MGP_PahariEiJ_G0029356) #17	Gdf7 (MGP_PahariEiJ_G0029357)	Hs1bp3 (MGP_PahariEiJ_G0029358) #18	Rhob (MGP_PahariEiJ_G0029359)	Slc7a15 (MGP_PahariEiJ_G0029360) #19	Pum2 (MGP_PahariEiJ_G0029361) #20	Sdc1 (MGP_PahariEiJ_G0029362) #22	MGP_PahariEiJ_G0029363 #23	Matn3 (MGP_PahariEiJ_G0029364) #24	Wdr35 (MGP_PahariEiJ_G0029365) #25	Ttc32 (MGP_PahariEiJ_G0029366) #26	Osr1 (MGP_PahariEiJ_G0029367) #27	Nt5c1b (MGP_PahariEiJ_G0029368) #28	Rdh14 (MGP_PahariEiJ_G0029369) #29	Kcns3 (MGP_PahariEiJ_G0029370) #30	Msgn1 (MGP_PahariEiJ_G0029371) #31	Gen1 (MGP_PahariEiJ_G0029372) #32	Smc6 (MGP_PahariEiJ_G0029373) #33	Vsnl1 (MGP_PahariEiJ_G0029374) #34	Rad51ap2 (MGP_PahariEiJ_G0029375)	Cyria (MGP_PahariEiJ_G0029376)	Mycn (MGP_PahariEiJ_G0029377)
Rat	MODERN SPECIES	16	Sf3b6 (ENSRNOG00000046172) #9	Fkbp1b (ENSRNOG00000047143) #10	Wdcp (ENSRNOG00000049989) #11	Mfsd2b (ENSRNOG00000023508) ##12	Ubxn2a (ENSRNOG00000068687) #13	Atad2b (ENSRNOG00000058973) #14	Klhl29 (ENSRNOG00000005371) #15	ENSRNOG00000069218	Tdrd15 (ENSRNOG00000060052)	Apob (ENSRNOG00000005542) #16	Ldah (ENSRNOG00000021475) #17	Gdf7 (ENSRNOG00000006046)	Hs1bp3 (ENSRNOG00000006062) #18	Slc7a15 (ENSRNOG00000006119) #19	Pum2 (ENSRNOG00000006180) #20	Sdc1 (ENSRNOG00000059947) #22	Laptm4a (ENSRNOG00000006865) #23	Matn3 (ENSRNOG00000056141) #24	Wdr35 (ENSRNOG00000028783) #25	Ttc32 (ENSRNOG00000049088) #26	Osr1 (ENSRNOG00000004210) #27	Nt5c1b (ENSRNOG00000004296) #28	Rdh14 (ENSRNOG00000039551) #29	Kcns3 (ENSRNOG00000004899) #30	Msgn1 (ENSRNOG00000028518) #31	Gen1 (ENSRNOG00000004667) #32	Smc6 (ENSRNOG00000004908) #33	Vsnl1 (ENSRNOG00000005345) #34	Rad51ap2 (ENSRNOG00000049271)	AABR07072562.1 (ENSRNOG00000050653)	Cyria (ENSRNOG00000052758)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1858														ENSNGAG00000015046	ENSNGAG00000016665 #20	Sdc1 (ENSNGAG00000010323) #22	Laptm4a (ENSNGAG00000019118) #23	Matn3 (ENSNGAG00000000368) #24	Wdr35 (ENSNGAG00000020320) #25	Ttc32 (ENSNGAG00000011876) #26	Osr1 (ENSNGAG00000009668) #27	Nt5c1b (ENSNGAG00000014021) #28	Rdh14 (ENSNGAG00000001843) #29	ENSNGAG00000015754	Kcns3 (ENSNGAG00000015414) #30	Msgn1 (ENSNGAG00000014536) #31	Smc6 (ENSNGAG00000018825) #33	Vsnl1 (ENSNGAG00000012638) #34
Lesser Egyptian jerboa	MODERN SPECIES	106	Ubxn2a (ENSJJAG00000016225) #13	ENSJJAG00000017291 #14	ENSJJAG00000018968	ENSJJAG00000022603	ENSJJAG00000014110	Klhl29 (ENSJJAG00000023008) #15	ENSJJAG00000003145	ENSJJAG00000004727 #16	ENSJJAG00000007009 #16	Ldah (ENSJJAG00000015888) #17	Gdf7 (ENSJJAG00000016441)	ENSJJAG00000017439 #18	Rhob (ENSJJAG00000013877)	ENSJJAG00000017909	Pum2 (ENSJJAG00000020969) #20	Sdc1 (ENSJJAG00000021653) #22	Laptm4a (ENSJJAG00000000101) #23	Matn3 (ENSJJAG00000000252) #24	Wdr35 (ENSJJAG00000016508) #25	Ttc32 (ENSJJAG00000022107) #26	ENSJJAG00000014132	Osr1 (ENSJJAG00000022508) #27	Nt5c1b (ENSJJAG00000021950) #28	Rdh14 (ENSJJAG00000023561) #29	Kcns3 (ENSJJAG00000001486) #30	Msgn1 (ENSJJAG00000006273) #31	Smc6 (ENSJJAG00000010160) #33	Vsnl1 (ENSJJAG00000011824) #34	ENSJJAG00000014268	ENSJJAG00000013620	Cyria (ENSJJAG00000007480)
Kangaroo rat	MODERN SPECIES	339	ENSDORG00000009773	ENSDORG00000009772 #9	Fkbp1b (ENSDORG00000025103) #10	Wdcp (ENSDORG00000009768) #11	Mfsd2b (ENSDORG00000015943) ##12	Ubxn2a (ENSDORG00000025740) #13	ENSDORG00000027743 #14	Klhl29 (ENSDORG00000012917) #15	Apob (ENSDORG00000028395) #16	Ldah (ENSDORG00000010281) #17	Gdf7 (ENSDORG00000010280)	Hs1bp3 (ENSDORG00000005361) #18	Rhob (ENSDORG00000016173)	ENSDORG00000027569 ##19	Pum2 (ENSDORG00000011453) #20	Sdc1 (ENSDORG00000014605) #22	Laptm4a (ENSDORG00000014089) #23	Matn3 (ENSDORG00000014087) #24	Wdr35 (ENSDORG00000014086) #25	Ttc32 (ENSDORG00000029568) #26	Osr1 (ENSDORG00000000798) #27	Nt5c1b (ENSDORG00000012516) #28	Rdh14 (ENSDORG00000019712) #29	Kcns3 (ENSDORG00000024097) #30	Msgn1 (ENSDORG00000003509) #31	Gen1 (ENSDORG00000010754) #32	Smc6 (ENSDORG00000010753) #33	Vsnl1 (ENSDORG00000024043) #34	ENSDORG00000026713	Cyria (ENSDORG00000010274)	Mycn (ENSDORG00000009906)
Lagomorpha	ANCESTRAL SPECIES	75	ENSGT00940000153311.a.b.b #10	ENSGT00390000001660 #11	ENSGT00390000005318.b.b.a.h.a #12	ENSGT00520000055567.a.b #13	ENSGT00550000074694.b #14	ENSGT00940000158824 #15	ENSGT00940000162581	ENSGT00590000083139 #16	ENSGT00390000009688 #17	ENSGT00940000160140.b	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000162520.d #19	ENSGT00940000157575 #20	ENSGT00900000143081 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b	ENSGT00940000158432
Rabbit	MODERN SPECIES	11	FKBP1B (ENSOCUG00000037720) #10	WDCP (ENSOCUG00000012562) #11	ENSOCUG00000008793 #12	UBXN2A (ENSOCUG00000008783) #13	ATAD2B (ENSOCUG00000005723) #14	KLHL29 (ENSOCUG00000017372) #15	TDRD15 (ENSOCUG00000005346)	APOB (ENSOCUG00000005329) #16	LDAH (ENSOCUG00000015795) #17	GDF7 (ENSOCUG00000026956)	HS1BP3 (ENSOCUG00000015781) #18	RHOB (ENSOCUG00000032265)	ENSOCUG00000025149 #19	PUM2 (ENSOCUG00000017908) #20	ENSOCUG00000032467 #21	SDC1 (ENSOCUG00000025956) #22	LAPTM4A (ENSOCUG00000026699) #23	MATN3 (ENSOCUG00000021257) #24	WDR35 (ENSOCUG00000013185) #25	TTC32 (ENSOCUG00000003731) #26	ENSOCUG00000034308	OSR1 (ENSOCUG00000006091) #27	NT5C1B (ENSOCUG00000026238) #28	RDH14 (ENSOCUG00000025332) #29	KCNS3 (ENSOCUG00000007365) #30	MSGN1 (ENSOCUG00000000309) #31	GEN1 (ENSOCUG00000027255) #32	ENSOCUG00000034282 #33	ENSOCUG00000017307	VSNL1 (ENSOCUG00000026184) #34	RAD51AP2 (ENSOCUG00000027767)
Pika	MODERN SPECIES	432															PUM2 (ENSOPRG00000001963) #20	SDC1 (ENSOPRG00000001946) #22