Chordata	ANCESTRAL SPECIES																	ENSGT00950000183049.C #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183049.C #22
Gnathostomata	ANCESTRAL SPECIES	206												ENSGT00940000166035	ENSGT00940000156569 #29	ENSGT00390000008279.b #30	ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000165481	ENSGT01000000215232	ENSGT00940000165251	ENSGT00940000154870.D	ENSGT00940000156705 #25	ENSGT00940000162806 #17	ENSGT00610000086173 #18
Euteleostomi	ANCESTRAL SPECIES	305											ENSGT00940000166035	ENSGT00940000156569.b ##29	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000012355.A.b	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000165481	ENSGT00940000164082	ENSGT00940000156705 #25	ENSGT00610000086173 #18
Sarcopterygii	ANCESTRAL SPECIES	235				ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000012355.A.b	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25
Tetrapoda	ANCESTRAL SPECIES	122			ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593 #27	ENSGT00940000166035	ENSGT00940000156569.a.a ##29	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34
Amniota	ANCESTRAL SPECIES	23	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000157413 #34	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231	ENSGT00940000158081
Mammalia	ANCESTRAL SPECIES	39			ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Theria	ANCESTRAL SPECIES	31	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Eutheria	ANCESTRAL SPECIES	24	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Primates	ANCESTRAL SPECIES	18	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395.l #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Cebidae	ANCESTRAL SPECIES	8	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001.a #20	ENSGT00950000183049.C #22	ENSGT00390000018395.l.c #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Cebidae_a	ANCESTRAL SPECIES	48	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001.a #20	ENSGT00950000183049.C #22	ENSGT00390000018395.l.c #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Capuchin	MODERN SPECIES	280	KCNN1 (ENSCCAG00000021223) #7	ENSCCAG00000034197 #8	IL12RB1 (ENSCCAG00000001339) #9	MAST3 (ENSCCAG00000037603) #10	PIK3R2 (ENSCCAG00000036359) #11	IFI30 (ENSCCAG00000000030) #12	MPV17L2 (ENSCCAG00000030804) #13	RAB3A (ENSCCAG00000025412) #14	PDE4C (ENSCCAG00000034162) #15	IQCN (ENSCCAG00000021916) #16	JUND (ENSCCAG00000014839) #17	LSM4 (ENSCCAG00000036308) #18	PGPEP1 (ENSCCAG00000038062) #19	LRRC25 (ENSCCAG00000010954) #20	GDF15 (ENSCCAG00000024961) #21	SSBP4 (ENSCCAG00000028026) #22	ENSCCAG00000034050 #23	ELL (ENSCCAG00000018316) #24	FKBP8 (ENSCCAG00000026822) #25	KXD1 (ENSCCAG00000037734) #26	UBA52 (ENSCCAG00000020993) #27	REX1BD (ENSCCAG00000025734) #28	CRLF1 (ENSCCAG00000027668) #29	TMEM59L (ENSCCAG00000030314) #30	KLHL26 (ENSCCAG00000019068) #31	CRTC1 (ENSCCAG00000023281) #32	COMP (ENSCCAG00000032561) #33	UPF1 (ENSCCAG00000032175) #34	GDF1 (ENSCCAG00000027600) #35	CERS1 (ENSCCAG00000033033) #36	COPE (ENSCCAG00000036516) #37
Bolivian squirrel monkey	MODERN SPECIES	199	CCDC124 (ENSSBOG00000034670)	KCNN1 (ENSSBOG00000002510) #7	ARRDC2 (ENSSBOG00000024827) #8	IL12RB1 (ENSSBOG00000023917) #9	MAST3 (ENSSBOG00000029746) #10	PIK3R2 (ENSSBOG00000034199) #11	IFI30 (ENSSBOG00000023021) #12	MPV17L2 (ENSSBOG00000027135) #13	RAB3A (ENSSBOG00000022908) #14	PDE4C (ENSSBOG00000030911) #15	IQCN (ENSSBOG00000025869) #16	LSM4 (ENSSBOG00000022455) #18	PGPEP1 (ENSSBOG00000026995) #19	GDF15 (ENSSBOG00000031274) #21	ENSSBOG00000035371 #20	SSBP4 (ENSSBOG00000023739) #22	ENSSBOG00000028796 #23	ELL (ENSSBOG00000025773) #24	FKBP8 (ENSSBOG00000026752) #25	UBA52 (ENSSBOG00000024000) #27	REX1BD (ENSSBOG00000030684) #28	CRLF1 (ENSSBOG00000029563) #29	TMEM59L (ENSSBOG00000019651) #30	KLHL26 (ENSSBOG00000031453) #31	CRTC1 (ENSSBOG00000032842) #32	COMP (ENSSBOG00000003799) #33	UPF1 (ENSSBOG00000023632) #34	GDF1 (ENSSBOG00000035053) #35	CERS1 (ENSSBOG00000000038) #36	COPE (ENSSBOG00000014113) #37	DDX49 (ENSSBOG00000035812)
Marmoset	MODERN SPECIES	14	IL12RB1 (ENSCJAG00000014045) #9	ENSCJAG00000072185 #14	MAST3 (ENSCJAG00000014057) #10	PIK3R2 (ENSCJAG00000014073) #11	IFI30 (ENSCJAG00000014094) #12	MPV17L2 (ENSCJAG00000014104) #13	PDE4C (ENSCJAG00000042536) #15	ENSCJAG00000071787	ENSCJAG00000065876	IQCN (ENSCJAG00000014148) #16	JUND (ENSCJAG00000059058) #17	ENSCJAG00000014171	PGPEP1 (ENSCJAG00000014176) #19	GDF15 (ENSCJAG00000048614) #21	ENSCJAG00000000915 ##20	SSBP4 (ENSCJAG00000014185) #22	ENSCJAG00000014230 #23	ELL (ENSCJAG00000015279) #24	FKBP8 (ENSCJAG00000039606) #25	KXD1 (ENSCJAG00000007479) #26	ENSCJAG00000053720 ##27	ENSCJAG00000007459 #28	CRLF1 (ENSCJAG00000007427) #29	TMEM59L (ENSCJAG00000007447) #30	KLHL26 (ENSCJAG00000007445) #31	CRTC1 (ENSCJAG00000007421) #32	COMP (ENSCJAG00000001175) #33	UPF1 (ENSCJAG00000019627) #34	CERS1 (ENSCJAG00000019660) #36	COPE (ENSCJAG00000019706) #37	DDX49 (ENSCJAG00000042114)
Mas night monkey	MODERN SPECIES	1353	CCDC124 (ENSANAG00000020604)	KCNN1 (ENSANAG00000037378) #7	ARRDC2 (ENSANAG00000036755) #8	IL12RB1 (ENSANAG00000020938) #9	MAST3 (ENSANAG00000030335) #10	PIK3R2 (ENSANAG00000001008) #11	IFI30 (ENSANAG00000032341) #12	MPV17L2 (ENSANAG00000008820) #13	RAB3A (ENSANAG00000030989) #14	PDE4C (ENSANAG00000020146) #15	IQCN (ENSANAG00000024831) #16	LSM4 (ENSANAG00000034659) #18	PGPEP1 (ENSANAG00000025508) #19	GDF15 (ENSANAG00000030690) #21	LRRC25 (ENSANAG00000030759) #20	SSBP4 (ENSANAG00000033180) #22	ENSANAG00000037789 #23	ELL (ENSANAG00000037567) #24	ENSANAG00000019584	FKBP8 (ENSANAG00000018877) #25	UBA52 (ENSANAG00000037329) #27	REX1BD (ENSANAG00000031851) #28	CRLF1 (ENSANAG00000022571) #29	TMEM59L (ENSANAG00000037189) #30	KLHL26 (ENSANAG00000022024) #31	ENSANAG00000030890 #32	COMP (ENSANAG00000023447) #33	UPF1 (ENSANAG00000024107) #34	GDF1 (ENSANAG00000037936) #35	COPE (ENSANAG00000018604) #37	DDX49 (ENSANAG00000031415)
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000157050 #11	ENSGT00940000161627.a.a.a.b.a.b.b.a.a.b.b.a.a.a.a.a	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT01100000263539.b.b.a.b.b.b.b.a	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT01100000263577.a.a.b.b.a.a.a.b.a.a.a.a	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT01100000263493.a.a.a.b.a.a.b.a.a.a.b	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Rhesus	MODERN SPECIES	10	PIK3R2 (ENSMMUG00000003162) #11	ENSMMUG00000059656	IFI30 (ENSMMUG00000051543) #12	MPV17L2 (ENSMMUG00000057067) #13	RAB3A (ENSMMUG00000011317) #14	PDE4C (ENSMMUG00000005028) #15	ENSMMUG00000065139	IQCN (ENSMMUG00000016354) #16	JUND (ENSMMUG00000038371) #17	ENSMMUG00000050519	LSM4 (ENSMMUG00000004405) #18	PGPEP1 (ENSMMUG00000004406) #19	ENSMMUG00000059530	GDF15 (ENSMMUG00000050122) #21	LRRC25 (ENSMMUG00000021181) #20	SSBP4 (ENSMMUG00000021182) #22	ISYNA1 (ENSMMUG00000021183) #23	ELL (ENSMMUG00000013671) #24	FKBP8 (ENSMMUG00000009587) #25	KXD1 (ENSMMUG00000016085) #26	UBA52 (ENSMMUG00000064485) #27	ENSMMUG00000054512	TMEM59L (ENSMMUG00000009988) #30	CRLF1 (ENSMMUG00000060102) #29	KLHL26 (ENSMMUG00000064204) #31	CRTC1 (ENSMMUG00000006509) #32	COMP (ENSMMUG00000006511) #33	ENSMMUG00000056644	UPF1 (ENSMMUG00000023286) #34	GDF1 (ENSMMUG00000023290) #35	CERS1 (ENSMMUG00000059247) #36
Crab-eating macaque	MODERN SPECIES	10	MAST3 (ENSMFAG00000040625) #10	PIK3R2 (ENSMFAG00000034445) #11	ENSMFAG00000062890	IFI30 (ENSMFAG00000034585) #12	RAB3A (ENSMFAG00000030826) #14	MPV17L2 (ENSMFAG00000041586) #13	PDE4C (ENSMFAG00000041375) #15	ENSMFAG00000049148	IQCN (ENSMFAG00000042967) #16	ENSMFAG00000049018	LSM4 (ENSMFAG00000031194) #18	PGPEP1 (ENSMFAG00000009200) #19	ENSMFAG00000063416	GDF15 (ENSMFAG00000050470) #21	LRRC25 (ENSMFAG00000034355) #20	SSBP4 (ENSMFAG00000041433) #22	ISYNA1 (ENSMFAG00000044263) #23	ELL (ENSMFAG00000044774) #24	FKBP8 (ENSMFAG00000034676) #25	KXD1 (ENSMFAG00000044925) #26	UBA52 (ENSMFAG00000049103) #27	REX1BD (ENSMFAG00000044115) #28	CRLF1 (ENSMFAG00000001307) #29	ENSMFAG00000045477 #30	ENSMFAG00000044055 #31	KLHL26 (ENSMFAG00000062634) #31	CRTC1 (ENSMFAG00000045375) #32	ENSMFAG00000004008 #33	ENSMFAG00000052968	ENSMFAG00000037748 #34	ENSMFAG00000065281 #34
Pig-tailed macaque	MODERN SPECIES	76	CCDC124 (ENSMNEG00000036237)	KCNN1 (ENSMNEG00000030766) #7	ARRDC2 (ENSMNEG00000043515) #8	IL12RB1 (ENSMNEG00000024389) #9	MAST3 (ENSMNEG00000038739) #10	PIK3R2 (ENSMNEG00000028516) #11	IFI30 (ENSMNEG00000031440) #12	MPV17L2 (ENSMNEG00000034679) #13	RAB3A (ENSMNEG00000030363) #14	PDE4C (ENSMNEG00000018173) #15	IQCN (ENSMNEG00000031188) #16	LSM4 (ENSMNEG00000042899) #18	PGPEP1 (ENSMNEG00000036180) #19	GDF15 (ENSMNEG00000012923) #21	LRRC25 (ENSMNEG00000040071) #20	SSBP4 (ENSMNEG00000033173) #22	ISYNA1 (ENSMNEG00000044547) #23	ELL (ENSMNEG00000044645) #24	FKBP8 (ENSMNEG00000031077) #25	UBA52 (ENSMNEG00000032643) #27	REX1BD (ENSMNEG00000045352) #28	CRLF1 (ENSMNEG00000033002) #29	TMEM59L (ENSMNEG00000044854) #30	KLHL26 (ENSMNEG00000045346) #31	CRTC1 (ENSMNEG00000021530) #32	COMP (ENSMNEG00000037024) #33	UPF1 (ENSMNEG00000000046) #34	GDF1 (ENSMNEG00000041111) #35	COPE (ENSMNEG00000031787) #37	DDX49 (ENSMNEG00000029654)	HOMER3 (ENSMNEG00000042042)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Olive baboon	MODERN SPECIES	12	KCNN1 (ENSPANG00000010107) #7	ARRDC2 (ENSPANG00000001630) #8	IL12RB1 (ENSPANG00000031075) #9	MAST3 (ENSPANG00000004443) #10	PIK3R2 (ENSPANG00000002533) #11	IFI30 (ENSPANG00000034060) #12	MPV17L2 (ENSPANG00000013957) #13	RAB3A (ENSPANG00000009376) #14	PDE4C (ENSPANG00000004911) #15	ENSPANG00000048218	IQCN (ENSPANG00000015622) #16	LSM4 (ENSPANG00000014399) #18	PGPEP1 (ENSPANG00000013956) #19	GDF15 (ENSPANG00000015201) #21	LRRC25 (ENSPANG00000006961) #20	SSBP4 (ENSPANG00000008549) #22	ISYNA1 (ENSPANG00000004910) #23	ELL (ENSPANG00000015376) #24	FKBP8 (ENSPANG00000012120) #25	KXD1 (ENSPANG00000004389) #26	UBA52 (ENSPANG00000048839) #27	REX1BD (ENSPANG00000032734) #28	CRLF1 (ENSPANG00000011399) #29	TMEM59L (ENSPANG00000018010) #30	KLHL26 (ENSPANG00000023921) #31	CRTC1 (ENSPANG00000014162) #32	COMP (ENSPANG00000004388) #33	UPF1 (ENSPANG00000008847) #34	GDF1 (ENSPANG00000004387) #35	CERS1 (ENSPANG00000005280) #36	COPE (ENSPANG00000002532) #37
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Sooty mangabey	MODERN SPECIES	347	KCNN1 (ENSCATG00000044072) #7	ARRDC2 (ENSCATG00000042338) #8	IL12RB1 (ENSCATG00000033199) #9	MAST3 (ENSCATG00000037793) #10	PIK3R2 (ENSCATG00000035498) #11	IFI30 (ENSCATG00000030819) #12	MPV17L2 (ENSCATG00000036815) #13	RAB3A (ENSCATG00000042078) #14	PDE4C (ENSCATG00000021874) #15	IQCN (ENSCATG00000029221) #16	JUND (ENSCATG00000041206) #17	LSM4 (ENSCATG00000029311) #18	PGPEP1 (ENSCATG00000033807) #19	GDF15 (ENSCATG00000042827) #21	LRRC25 (ENSCATG00000038001) #20	SSBP4 (ENSCATG00000028212) #22	ISYNA1 (ENSCATG00000029593) #23	ELL (ENSCATG00000017360) #24	FKBP8 (ENSCATG00000034787) #25	UBA52 (ENSCATG00000032279) #27	REX1BD (ENSCATG00000032246) #28	CRLF1 (ENSCATG00000031612) #29	TMEM59L (ENSCATG00000031976) #30	KLHL26 (ENSCATG00000040338) #31	CRTC1 (ENSCATG00000037923) #32	COMP (ENSCATG00000021027) #33	ENSCATG00000029785	UPF1 (ENSCATG00000040306) #34	GDF1 (ENSCATG00000033208) #35	CERS1 (ENSCATG00000033850) #36	COPE (ENSCATG00000038467) #37
Drill	MODERN SPECIES	160	CCDC124 (ENSMLEG00000031049)	KCNN1 (ENSMLEG00000042986) #7	ARRDC2 (ENSMLEG00000033675) #8	IL12RB1 (ENSMLEG00000035938) #9	MAST3 (ENSMLEG00000038024) #10	PIK3R2 (ENSMLEG00000006536) #11	IFI30 (ENSMLEG00000042593) #12	MPV17L2 (ENSMLEG00000028030) #13	RAB3A (ENSMLEG00000040567) #14	PDE4C (ENSMLEG00000043449) #15	IQCN (ENSMLEG00000031635) #16	LSM4 (ENSMLEG00000027948) #18	PGPEP1 (ENSMLEG00000041283) #19	GDF15 (ENSMLEG00000043577) #21	LRRC25 (ENSMLEG00000023417) #20	SSBP4 (ENSMLEG00000024111) #22	ISYNA1 (ENSMLEG00000033928) #23	ELL (ENSMLEG00000023490) #24	FKBP8 (ENSMLEG00000029078) #25	UBA52 (ENSMLEG00000038811) #27	REX1BD (ENSMLEG00000041099) #28	CRLF1 (ENSMLEG00000041126) #29	TMEM59L (ENSMLEG00000032687) #30	KLHL26 (ENSMLEG00000038620) #31	CRTC1 (ENSMLEG00000044311) #32	COMP (ENSMLEG00000028753) #33	UPF1 (ENSMLEG00000028404) #34	CERS1 (ENSMLEG00000020659) #36	COPE (ENSMLEG00000042923) #37	DDX49 (ENSMLEG00000042550)	HOMER3 (ENSMLEG00000042234)
Vervet Monkey	MODERN SPECIES	25	KCNN1 (ENSCSAG00000005458) #7	ARRDC2 (ENSCSAG00000005446) #8	IL12RB1 (ENSCSAG00000005439) #9	MAST3 (ENSCSAG00000005430) #10	PIK3R2 (ENSCSAG00000005413) #11	IFI30 (ENSCSAG00000005389) #12	MPV17L2 (ENSCSAG00000005386) #13	RAB3A (ENSCSAG00000005381) #14	PDE4C (ENSCSAG00000005377) #15	ENSCSAG00000005372	JUND (ENSCSAG00000018498) #17	LSM4 (ENSCSAG00000005370) #18	PGPEP1 (ENSCSAG00000005365) #19	GDF15 (ENSCSAG00000005364) #21	LRRC25 (ENSCSAG00000005359) #20	SSBP4 (ENSCSAG00000005355) #22	ISYNA1 (ENSCSAG00000005350) #23	ELL (ENSCSAG00000005345) #24	FKBP8 (ENSCSAG00000005342) #25	KXD1 (ENSCSAG00000005336) #26	UBA52 (ENSCSAG00000005332) #27	REX1BD (ENSCSAG00000005329) #28	CRLF1 (ENSCSAG00000005321) #29	TMEM59L (ENSCSAG00000005314) #30	KLHL26 (ENSCSAG00000005309) #31	CRTC1 (ENSCSAG00000005304) #32	COMP (ENSCSAG00000005292) #33	UPF1 (ENSCSAG00000005276) #34	GDF1 (ENSCSAG00000005273) #35	CERS1 (ENSCSAG00000005267) #36	COPE (ENSCSAG00000005262) #37
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00390000012482	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Black snub-nosed monkey	MODERN SPECIES	621	CCDC124 (ENSRBIG00000035477)	KCNN1 (ENSRBIG00000039165) #7	ARRDC2 (ENSRBIG00000041831) #8	IL12RB1 (ENSRBIG00000033720) #9	MAST3 (ENSRBIG00000037301) #10	PIK3R2 (ENSRBIG00000031224) #11	IFI30 (ENSRBIG00000041792) #12	MPV17L2 (ENSRBIG00000033280) #13	RAB3A (ENSRBIG00000029506) #14	PDE4C (ENSRBIG00000028744) #15	IQCN (ENSRBIG00000029845) #16	LSM4 (ENSRBIG00000024717) #18	PGPEP1 (ENSRBIG00000043819) #19	GDF15 (ENSRBIG00000038712) #21	LRRC25 (ENSRBIG00000036814) #20	SSBP4 (ENSRBIG00000022818) #22	ISYNA1 (ENSRBIG00000044096) #23	ELL (ENSRBIG00000041918) #24	FKBP8 (ENSRBIG00000038838) #25	ENSRBIG00000013976	UBA52 (ENSRBIG00000028020) #27	REX1BD (ENSRBIG00000039070) #28	CRLF1 (ENSRBIG00000036409) #29	TMEM59L (ENSRBIG00000030377) #30	TNRC6C (ENSRBIG00000027777)	TMC6 (ENSRBIG00000035625)	TMC8 (ENSRBIG00000030185)	C17orf99 (ENSRBIG00000036244)	ENSRBIG00000043138	TK1 (ENSRBIG00000004804)	AFMID (ENSRBIG00000035765)
Golden snub-nosed monkey	MODERN SPECIES	2586		KCNN1 (ENSRROG00000031971) #7	ARRDC2 (ENSRROG00000032443) #8	IL12RB1 (ENSRROG00000025433) #9	MAST3 (ENSRROG00000028644) #10	PIK3R2 (ENSRROG00000026877) #11	IFI30 (ENSRROG00000034013) #12	MPV17L2 (ENSRROG00000038653) #13	RAB3A (ENSRROG00000028696) #14	PDE4C (ENSRROG00000035958) #15	IQCN (ENSRROG00000043412) #16	LSM4 (ENSRROG00000045706) #18	PGPEP1 (ENSRROG00000040082) #19	GDF15 (ENSRROG00000031808) #21	LRRC25 (ENSRROG00000032505) #20	SSBP4 (ENSRROG00000037587) #22	ISYNA1 (ENSRROG00000041153) #23	ELL (ENSRROG00000042635) #24	FKBP8 (ENSRROG00000022396) #25	ENSRROG00000044752	UBA52 (ENSRROG00000033884) #27	REX1BD (ENSRROG00000030965) #28	CRLF1 (ENSRROG00000030939) #29	TMEM59L (ENSRROG00000024021) #30	KLHL26 (ENSRROG00000030821) #31	CRTC1 (ENSRROG00000039912) #32	COMP (ENSRROG00000043878) #33	UPF1 (ENSRROG00000040935) #34	GDF1 (ENSRROG00000041769) #35	CERS1 (ENSRROG00000038529) #36	COPE (ENSRROG00000032396) #37
Hominoidea	DUPLICATION
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C.e.a #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Hominidae	ANCESTRAL SPECIES		ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C.e.a #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000161158.e.a	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C.e.a #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000161158.e.a	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C.e.a #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Human	MODERN SPECIES	10	IL12RB1 (ENSG00000096996) #9	MAST3 (ENSG00000099308) #10	PIK3R2 (ENSG00000105647) #11	IFI30 (ENSG00000216490) #12	MPV17L2 (ENSG00000254858) #13	RAB3A (ENSG00000105649) #14	ENSG00000285188	PDE4C (ENSG00000105650) #15	ENSG00000284797	IQCN (ENSG00000130518) #16	JUND (ENSG00000130522) #17	LSM4 (ENSG00000130520) #18	PGPEP1 (ENSG00000130517) #19	GDF15 (ENSG00000130513) #21	LRRC25 (ENSG00000175489) #20	SSBP4 (ENSG00000130511) #22	ISYNA1 (ENSG00000105655) #23	ELL (ENSG00000105656) #24	FKBP8 (ENSG00000105701) #25	KXD1 (ENSG00000105700) #26	UBA52 (ENSG00000221983) #27	CRLF1 (ENSG00000006016) #29	REX1BD (ENSG00000006015) #28	TMEM59L (ENSG00000105696) #30	KLHL26 (ENSG00000167487) #31	CRTC1 (ENSG00000105662) #32	COMP (ENSG00000105664) #33	UPF1 (ENSG00000005007) #34	GDF1 (ENSG00000130283) #35	CERS1 (ENSG00000223802) #36	COPE (ENSG00000105669) #37
Pan	ANCESTRAL SPECIES	14	ENSGT00940000159994 #8	ENSGT00940000161158.e.a.a	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C.e.a #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.g #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Bonobo	MODERN SPECIES	10	KCNN1 (ENSPPAG00000027691) #7	ARRDC2 (ENSPPAG00000030581) #8	ENSPPAG00000030988	IL12RB1 (ENSPPAG00000035617) #9	MAST3 (ENSPPAG00000037942) #10	PIK3R2 (ENSPPAG00000028206) #11	IFI30 (ENSPPAG00000034079) #12	MPV17L2 (ENSPPAG00000039781) #13	RAB3A (ENSPPAG00000028870) #14	PDE4C (ENSPPAG00000032992) #15	IQCN (ENSPPAG00000036393) #16	ENSPPAG00000044045 #18	PGPEP1 (ENSPPAG00000029656) #19	GDF15 (ENSPPAG00000038519) #21	LRRC25 (ENSPPAG00000042781) #20	SSBP4 (ENSPPAG00000041039) #22	ISYNA1 (ENSPPAG00000010473) #23	ELL (ENSPPAG00000029139) #24	FKBP8 (ENSPPAG00000012972) #25	ENSPPAG00000042675 #27	REX1BD (ENSPPAG00000043331) #28	ENSPPAG00000039468	CRLF1 (ENSPPAG00000041635) #29	TMEM59L (ENSPPAG00000029514) #30	KLHL26 (ENSPPAG00000039902) #31	CRTC1 (ENSPPAG00000003288) #32	COMP (ENSPPAG00000040783) #33	UPF1 (ENSPPAG00000043884) #34	CERS1 (ENSPPAG00000036380) #36	COPE (ENSPPAG00000020767) #37	DDX49 (ENSPPAG00000035217)
Gorilla	MODERN SPECIES	10	ARRDC2 (ENSGGOG00000005798) #8	ENSGGOG00000042605	IL12RB1 (ENSGGOG00000003006) #9	MAST3 (ENSGGOG00000016175) #10	ENSGGOG00000016197 #11	IFI30 (ENSGGOG00000012247) #12	MPV17L2 (ENSGGOG00000008883) #13	RAB3A (ENSGGOG00000008890) #14	PDE4C (ENSGGOG00000010732) #15	IQCN (ENSGGOG00000015207) #16	ENSGGOG00000028553 #17	LSM4 (ENSGGOG00000012914) #18	PGPEP1 (ENSGGOG00000013744) #19	GDF15 (ENSGGOG00000016924) #21	LRRC25 (ENSGGOG00000016928) #20	SSBP4 (ENSGGOG00000016931) #22	ISYNA1 (ENSGGOG00000016939) #23	ENSGGOG00000002438 #24	FKBP8 (ENSGGOG00000012866) #25	ENSGGOG00000004628 #27	ENSGGOG00000036627	REX1BD (ENSGGOG00000026716) #28	CRLF1 (ENSGGOG00000010973) #29	TMEM59L (ENSGGOG00000011271) #30	KLHL26 (ENSGGOG00000007063) #31	CRTC1 (ENSGGOG00000000987) #32	COMP (ENSGGOG00000007897) #33	UPF1 (ENSGGOG00000002608) #34	ENSGGOG00000025662 #35	COPE (ENSGGOG00000006987) #37	DDX49 (ENSGGOG00000037966)
Orangutan	MODERN SPECIES	10	ARRDC2 (ENSPPYG00000009728) #8	IL12RB1 (ENSPPYG00000009729) #9	MAST3 (ENSPPYG00000009730) #10	PIK3R2 (ENSPPYG00000009731) #11	IFI30 (ENSPPYG00000034245) #12	ENSPPYG00000009732 #13	RAB3A (ENSPPYG00000009575) #14	PDE4C (ENSPPYG00000009734) #15	ENSPPYG00000029846	IQCN (ENSPPYG00000009735) #16	JUND (ENSPPYG00000030870) #17	LSM4 (ENSPPYG00000009736) #18	PGPEP1 (ENSPPYG00000034816) #19	GDF15 (ENSPPYG00000009739) #21	LRRC25 (ENSPPYG00000009740) #20	SSBP4 (ENSPPYG00000009741) #22	ISYNA1 (ENSPPYG00000009742) #23	ELL (ENSPPYG00000037377) #24	FKBP8 (ENSPPYG00000009744) #25	ENSPPYG00000034496 #26	UBA52 (ENSPPYG00000034989) #27	REX1BD (ENSPPYG00000009747) #28	CRLF1 (ENSPPYG00000009748) #29	TMEM59L (ENSPPYG00000009749) #30	KLHL26 (ENSPPYG00000009750) #31	CRTC1 (ENSPPYG00000009751) #32	COMP (ENSPPYG00000036755) #33	UPF1 (ENSPPYG00000009752) #34	CERS1 (ENSPPYG00000029471) #36	COPE (ENSPPYG00000009753) #37	DDX49 (ENSPPYG00000009755)
Gibbon	MODERN SPECIES		SLC5A5 (ENSNLEG00000005904)	CCDC124 (ENSNLEG00000005911)	KCNN1 (ENSNLEG00000005913) #7	ARRDC2 (ENSNLEG00000005917) #8	ENSNLEG00000027772	ENSNLEG00000005925 #9	MAST3 (ENSNLEG00000031094) #10	ENSNLEG00000005931 #11	ENSNLEG00000005937 #12	RAB3A (ENSNLEG00000005947) #14	ENSNLEG00000005948 #15	IQCN (ENSNLEG00000005979) #16	ENSNLEG00000027702	PGPEP1 (ENSNLEG00000006017) #19	GDF15 (ENSNLEG00000028565) #21	SSBP4 (ENSNLEG00000006022) #22	ISYNA1 (ENSNLEG00000006026) #23	ELL (ENSNLEG00000006044) #24	FKBP8 (ENSNLEG00000006049) #25	KXD1 (ENSNLEG00000006059) #26	ENSNLEG00000035588	ENSNLEG00000034752	REX1BD (ENSNLEG00000027561) #28	TMEM59L (ENSNLEG00000006075) #30	ENSNLEG00000006077 #31	CRTC1 (ENSNLEG00000006083) #32	ENSNLEG00000005980 #33	UPF1 (ENSNLEG00000006062) #34	GDF1 (ENSNLEG00000006089) #35	COPE (ENSNLEG00000006090) #37	DDX49 (ENSNLEG00000006136)
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00940000154686.h.b	ENSGT00390000018415	ENSGT00390000000781	ENSGT00390000003058.a	ENSGT01050000248405	ENSGT00950000182810.A.a.b	ENSGT00940000159566	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000153661.b.b	ENSGT00950000183049.C.e.b #22	ENSGT00940000160536	ENSGT00390000013236.c	ENSGT00940000155271	ENSGT00940000154456	ENSGT00390000005826.b	ENSGT00640000091492.a	ENSGT00940000154799.sb	ENSGT01030000234979	ENSGT00940000154799.rb.a	ENSGT00940000163147	ENSGT00940000155702.k	ENSGT00950000183066.a.b.a.a	ENSGT00910000147048	ENSGT00940000154639.o	ENSGT00390000007058
Hominidae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.e.b #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00390000000724.c.b	ENSGT00390000006238.j.a	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00910000147337	ENSGT00940000153783.b.b.c.b	ENSGT00940000154686.h.b	ENSGT00390000018415	ENSGT00390000000781	ENSGT00390000003058.a	ENSGT00950000182810.A.a.b	ENSGT00940000159566	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000153661.b.b	ENSGT00950000183049.C.e.b #22	ENSGT00940000160536	ENSGT00390000013236.c	ENSGT00940000155271	ENSGT01100000263493.a.b.b.a.a.a.b	ENSGT00940000153249.b.c.b	ENSGT00940000154456	ENSGT00390000005826.b	ENSGT00640000091492.a	ENSGT00940000154799.rb.a	ENSGT00940000163147	ENSGT00940000155702.k	ENSGT00950000183066.a.b.a.a	ENSGT00910000147048	ENSGT00940000154639.o	ENSGT00390000007058
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00390000000724.c.b	ENSGT00390000006238.j.a	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00910000147337	ENSGT00940000153783.b.b.c.b	ENSGT00940000154686.h.b	ENSGT00390000018415	ENSGT00390000000781	ENSGT00390000003058.a	ENSGT00950000182810.A.a.b	ENSGT00940000159566	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000153661.b.b	ENSGT00950000183049.C.e.b #22	ENSGT00940000160536	ENSGT00390000013236.c	ENSGT00940000155271	ENSGT01100000263493.a.b.b.a.a.a.b	ENSGT00940000153249.b.c.b	ENSGT00940000154456	ENSGT00390000005826.b	ENSGT00640000091492.a	ENSGT00940000154799.rb.a	ENSGT00940000163147	ENSGT00940000155702.k	ENSGT00950000183066.a.b.a.a	ENSGT00910000147048	ENSGT00940000154639.o	ENSGT00390000007058
Pan	ANCESTRAL SPECIES	24	ENSGT00390000006238.j.a	ENSGT00510000048187	ENSGT00940000153393.A	ENSGT00910000147337	ENSGT00940000153783.b.b.c.b	ENSGT00940000154686.h.b	ENSGT00390000018415	ENSGT00390000000781	ENSGT00390000003058.a	ENSGT00950000182810.A.a.b	ENSGT00940000159566	ENSGT00940000159977	ENSGT00390000018596.A.b	ENSGT00940000153661.b.b	ENSGT00390000010003.x	ENSGT00950000183049.C.e.b #22	ENSGT00940000160536	ENSGT00390000013236.c	ENSGT00940000155271	ENSGT01100000263493.a.b.b.a.a.a.b	ENSGT00940000154456	ENSGT00390000004417.b.l	ENSGT00940000166859	ENSGT00390000005826.b	ENSGT00640000091492.a	ENSGT00940000154799.sb	ENSGT01030000234979	ENSGT00940000154799.rb.a	ENSGT00940000163147	ENSGT00940000155702.k	ENSGT00950000183066.a.b.a.a
Bonobo	MODERN SPECIES	9							ENSPPAG00000039470	ENSPPAG00000041171	MC2R (ENSPPAG00000000811)	MC5R (ENSPPAG00000002115)	RNMT (ENSPPAG00000024176)	FAM210A (ENSPPAG00000037415)	LDLRAD4 (ENSPPAG00000004790)	ANKRD62 (ENSPPAG00000008689)	ENSPPAG00000010915	ENSPPAG00000013827 #22	IMPA2 (ENSPPAG00000017614)	MPPE1 (ENSPPAG00000023342)	ENSPPAG00000027739	ENSPPAG00000028740	PIEZO2 (ENSPPAG00000031522)	ENSPPAG00000034290	ENSPPAG00000034402	NAPG (ENSPPAG00000034754)	APCDD1 (ENSPPAG00000014896)	ENSPPAG00000020801	ENSPPAG00000021252	RAB31 (ENSPPAG00000023672)	PPP4R1 (ENSPPAG00000027340)	RALBP1 (ENSPPAG00000029236)	ENSPPAG00000032624
Chimpanzee	MODERN SPECIES	9	CEP192 (ENSPTRG00000009886)	SEH1L (ENSPTRG00000009885)	ENSPTRG00000048863	PTPN2 (ENSPTRG00000009884)	PSMG2 (ENSPTRG00000009883)	CEP76 (ENSPTRG00000009882)	SPIRE1 (ENSPTRG00000009881)	PRELID3A (ENSPTRG00000009880)	AFG3L2 (ENSPTRG00000009879)	TUBB6 (ENSPTRG00000009878)	ENSPTRG00000051567	CIDEA (ENSPTRG00000009877)	ANKRD62 (ENSPTRG00000009876)	ENSPTRG00000043975	ENSPTRG00000050933	SSBP4 (ENSPTRG00000045510) #22	IMPA2 (ENSPTRG00000009873)	MPPE1 (ENSPTRG00000009872)	GNAL (ENSPTRG00000009871)	ENSPTRG00000033980	PIEZO2 (ENSPTRG00000009868)	ENSPTRG00000047291	ENSPTRG00000048636	NAPG (ENSPTRG00000009866)	APCDD1 (ENSPTRG00000009865)	VAPA (ENSPTRG00000052052)	TXNDC2 (ENSPTRG00000023734)	RAB31 (ENSPTRG00000046336)	PPP4R1 (ENSPTRG00000009860)	RALBP1 (ENSPTRG00000009859)	ENSPTRG00000049443
Gorilla	MODERN SPECIES	9	ENSGGOG00000041707	ENSGGOG00000010259	PSMG2 (ENSGGOG00000010065)	CEP76 (ENSGGOG00000008528)	SPIRE1 (ENSGGOG00000005641)	PRELID3A (ENSGGOG00000022115)	AFG3L2 (ENSGGOG00000003311)	TUBB6 (ENSGGOG00000003308)	CIDEA (ENSGGOG00000004573)	ENSGGOG00000040936	ENSGGOG00000043131	ENSGGOG00000040680	ANKRD62 (ENSGGOG00000013724)	ENSGGOG00000023352	ENSGGOG00000026260	ENSGGOG00000025376 #22	IMPA2 (ENSGGOG00000011369)	MPPE1 (ENSGGOG00000000243)	ENSGGOG00000016040	ENSGGOG00000022548	ENSGGOG00000039272	ENSGGOG00000006682	PIEZO2 (ENSGGOG00000016934)	ENSGGOG00000036861	ENSGGOG00000025219	NAPG (ENSGGOG00000015414)	APCDD1 (ENSGGOG00000000973)	VAPA (ENSGGOG00000001682)	ENSGGOG00000007700	ENSGGOG00000025907	RAB31 (ENSGGOG00000000250)
Gibbon	MODERN SPECIES	19	FAM210A (ENSNLEG00000009221)	LDLRAD4 (ENSNLEG00000009210)	ENSNLEG00000028843	CEP192 (ENSNLEG00000009120)	SEH1L (ENSNLEG00000009089)	PTPN2 (ENSNLEG00000009074)	ENSNLEG00000009063	CEP76 (ENSNLEG00000009033)	SPIRE1 (ENSNLEG00000009022)	ENSNLEG00000035410	PRELID3A (ENSNLEG00000009002)	ENSNLEG00000030039	AFG3L2 (ENSNLEG00000008955)	TUBB6 (ENSNLEG00000008945)	CIDEA (ENSNLEG00000008938)	ENSNLEG00000008930 #22	IMPA2 (ENSNLEG00000008895)	MPPE1 (ENSNLEG00000008890)	GNAL (ENSNLEG00000008846)	PIEZO2 (ENSNLEG00000008803)	ENSNLEG00000028115	ENSNLEG00000028141	ENSNLEG00000035090	NAPG (ENSNLEG00000006969)	APCDD1 (ENSNLEG00000035005)	ENSNLEG00000034712	VAPA (ENSNLEG00000032272)	ENSNLEG00000006963	RAB31 (ENSNLEG00000006959)	PPP4R1 (ENSNLEG00000006952)	ENSNLEG00000032605
Hominoidea	ANCESTRAL SPECIES																	ENSGT00950000183049.C.f #22
Hominidae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.f #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00950000183049.C.f #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00950000183049.C.f #22
Pan	ANCESTRAL SPECIES																	ENSGT00950000183049.C.f #22
Chimpanzee	MODERN SPECIES	10	CERS1 (ENSPTRG00000039869) #36	GDF1 (ENSPTRG00000050095) #35	UPF1 (ENSPTRG00000010721) #34	COMP (ENSPTRG00000010720) #33	CRTC1 (ENSPTRG00000010719) #32	KLHL26 (ENSPTRG00000010718) #31	TMEM59L (ENSPTRG00000010717) #30	ENSPTRG00000044633	CRLF1 (ENSPTRG00000010716) #29	REX1BD (ENSPTRG00000010715) #28	KXD1 (ENSPTRG00000010713) #27	FKBP8 (ENSPTRG00000010712) #25	ELL (ENSPTRG00000010711) #24	ENSPTRG00000045918 #23	ENSPTRG00000046798	ENSPTRG00000049787 #22	ISYNA1 (ENSPTRG00000010710) #23	ENSPTRG00000052636 ##22	LRRC25 (ENSPTRG00000010708) #20	GDF15 (ENSPTRG00000010707) #21	PGPEP1 (ENSPTRG00000010703) #19	LSM4 (ENSPTRG00000031470) #18	JUND (ENSPTRG00000042879) #17	IQCN (ENSPTRG00000010700) #16	PDE4C (ENSPTRG00000010699) #15	RAB3A (ENSPTRG00000010697) #14	MPV17L2 (ENSPTRG00000010696) #13	IFI30 (ENSPTRG00000010695) #12	PIK3R2 (ENSPTRG00000010694) #11	MAST3 (ENSPTRG00000010693) #10	IL12RB1 (ENSPTRG00000010692) #9
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Bushbaby	MODERN SPECIES	220	KCNN1 (ENSOGAG00000012295) #7	ARRDC2 (ENSOGAG00000001138) #8	IL12RB1 (ENSOGAG00000001139) #9	MAST3 (ENSOGAG00000001141) #10	PIK3R2 (ENSOGAG00000001143) #11	IFI30 (ENSOGAG00000024708) #12	RAB3A (ENSOGAG00000010208) #14	PDE4C (ENSOGAG00000014301) #15	IQCN (ENSOGAG00000033156) #16	JUND (ENSOGAG00000025346) #17	LSM4 (ENSOGAG00000027992) #18	PGPEP1 (ENSOGAG00000014833) #19	ENSOGAG00000033959	GDF15 (ENSOGAG00000028283) #21	LRRC25 (ENSOGAG00000007429) #20	SSBP4 (ENSOGAG00000007430) #22	ISYNA1 (ENSOGAG00000007433) #23	ENSOGAG00000007437 #24	ENSOGAG00000030550 #24	FKBP8 (ENSOGAG00000007440) #25	KXD1 (ENSOGAG00000007523) #26	UBA52 (ENSOGAG00000028000) #27	REX1BD (ENSOGAG00000033304) #28	CRLF1 (ENSOGAG00000004920) #29	TMEM59L (ENSOGAG00000004923) #30	KLHL26 (ENSOGAG00000004926) #31	CRTC1 (ENSOGAG00000004927) #32	COMP (ENSOGAG00000004930) #33	UPF1 (ENSOGAG00000012866) #34	GDF1 (ENSOGAG00000012872) #35	CERS1 (ENSOGAG00000033679) #36
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Lemuriformes_a	ANCESTRAL SPECIES	65	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Coquerels sifaka	MODERN SPECIES	589	KCNN1 (ENSPCOG00000012840) #7	ARRDC2 (ENSPCOG00000013771) #8	IL12RB1 (ENSPCOG00000014526) #9	MAST3 (ENSPCOG00000013135) #10	PIK3R2 (ENSPCOG00000021064) #11	IFI30 (ENSPCOG00000015786) #12	MPV17L2 (ENSPCOG00000003636) #13	RAB3A (ENSPCOG00000013539) #14	PDE4C (ENSPCOG00000014383) #15	IQCN (ENSPCOG00000025626) #16	JUND (ENSPCOG00000014234) #17	LSM4 (ENSPCOG00000019837) #18	PGPEP1 (ENSPCOG00000022097) #19	GDF15 (ENSPCOG00000019844) #21	LRRC25 (ENSPCOG00000028609) #20	SSBP4 (ENSPCOG00000017141) #22	ISYNA1 (ENSPCOG00000023528) #23	ELL (ENSPCOG00000024473) #24	FKBP8 (ENSPCOG00000024761) #25	ENSPCOG00000012784 ##27	REX1BD (ENSPCOG00000014515) #28	CRLF1 (ENSPCOG00000013640) #29	TMEM59L (ENSPCOG00000026454) #30	KLHL26 (ENSPCOG00000028544) #31	CRTC1 (ENSPCOG00000027092) #32	COMP (ENSPCOG00000023117) #33	UPF1 (ENSPCOG00000023813) #34	GDF1 (ENSPCOG00000015607) #35	COPE (ENSPCOG00000015758) #37	DDX49 (ENSPCOG00000024973)	HOMER3 (ENSPCOG00000014798)
Greater bamboo lemur	MODERN SPECIES	392	KCNN1 (ENSPSMG00000025418) #7	ARRDC2 (ENSPSMG00000025428) #8	IL12RB1 (ENSPSMG00000025429) #9	MAST3 (ENSPSMG00000025443) #10	PIK3R2 (ENSPSMG00000025461) #11	IFI30 (ENSPSMG00000025464) #12	MPV17L2 (ENSPSMG00000025466) #13	RAB3A (ENSPSMG00000025469) #14	PDE4C (ENSPSMG00000025493) #15	IQCN (ENSPSMG00000000071) #16	JUND (ENSPSMG00000000089) #17	LSM4 (ENSPSMG00000000120) #18	PGPEP1 (ENSPSMG00000000175) #19	GDF15 (ENSPSMG00000000181) #21	LRRC25 (ENSPSMG00000000196) #20	SSBP4 (ENSPSMG00000000331) #22	ISYNA1 (ENSPSMG00000000412) #23	ELL (ENSPSMG00000000458) #24	FKBP8 (ENSPSMG00000000488) #25	KXD1 (ENSPSMG00000000536) #26	UBA52 (ENSPSMG00000000564) #27	REX1BD (ENSPSMG00000000580) #28	CRLF1 (ENSPSMG00000000604) #29	TMEM59L (ENSPSMG00000000639) #30	KLHL26 (ENSPSMG00000000655) #31	CRTC1 (ENSPSMG00000000672) #32	COMP (ENSPSMG00000000819) #33	UPF1 (ENSPSMG00000001054) #34	GDF1 (ENSPSMG00000001150) #35	CERS1 (ENSPSMG00000001173) #36	COPE (ENSPSMG00000001405) #37
Mouse lemur	MODERN SPECIES	16	JAK3 (ENSMICG00000034333)	RPL18A (ENSMICG00000029204)	SLC5A5 (ENSMICG00000031990)	CCDC124 (ENSMICG00000008707)	KCNN1 (ENSMICG00000000005) #7	ARRDC2 (ENSMICG00000048039) #8	MAST3 (ENSMICG00000034292) #10	PIK3R2 (ENSMICG00000028339) #11	MPV17L2 (ENSMICG00000044224) #13	RAB3A (ENSMICG00000047037) #14	PDE4C (ENSMICG00000037741) #15	IQCN (ENSMICG00000044860) #16	ENSMICG00000032841 #17	LSM4 (ENSMICG00000000222) #18	ENSMICG00000043044	ENSMICG00000034758 #22	ISYNA1 (ENSMICG00000017023) #23	ELL (ENSMICG00000017036) #24	ENSMICG00000046500 #25	KXD1 (ENSMICG00000045924) #26	UBA52 (ENSMICG00000047956) #27	REX1BD (ENSMICG00000038301) #28	CRLF1 (ENSMICG00000028147) #29	TMEM59L (ENSMICG00000010461) #30	KLHL26 (ENSMICG00000045410) #31	CRTC1 (ENSMICG00000000711) #32	COMP (ENSMICG00000028923) #33	UPF1 (ENSMICG00000001659) #34	GDF1 (ENSMICG00000031178) #35
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.E ##22	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Tree shrew	MODERN SPECIES	1319																SSBP4 (ENSTBEG00000009988) #22	ISYNA1 (ENSTBEG00000010235) #23	ENSTBEG00000010699 #24
Glires	ANCESTRAL SPECIES	21	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.E ##22	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Lagomorpha	ANCESTRAL SPECIES	468																ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24
Pika	MODERN SPECIES	1048																ENSOPRG00000001414 #22	ISYNA1 (ENSOPRG00000001447) #23	ELL (ENSOPRG00000001472) #24
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.d ##27	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00390000012482	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Long-tailed chinchilla	MODERN SPECIES	231	RPL18A (ENSCLAG00000010952)	ENSCLAG00000007225	CCDC124 (ENSCLAG00000007029)	KCNN1 (ENSCLAG00000006176) #7	ARRDC2 (ENSCLAG00000005752) #8	MAST3 (ENSCLAG00000012903) #10	PIK3R2 (ENSCLAG00000014107) #11	IFI30 (ENSCLAG00000016108) #12	MPV17L2 (ENSCLAG00000015953) #13	RAB3A (ENSCLAG00000015642) #14	PDE4C (ENSCLAG00000016330) #15	LSM4 (ENSCLAG00000010828) #18	PGPEP1 (ENSCLAG00000010542) #19	GDF15 (ENSCLAG00000010045) #21	ENSCLAG00000009618 #20	SSBP4 (ENSCLAG00000013009) #22	ISYNA1 (ENSCLAG00000008992) #23	ELL (ENSCLAG00000007609) #24	FKBP8 (ENSCLAG00000005953) #25	UBA52 (ENSCLAG00000005686) #27	ENSCLAG00000007191 #28	CRLF1 (ENSCLAG00000006697) #29	TMEM59L (ENSCLAG00000006357) #30	KLHL26 (ENSCLAG00000006029) #31	CRTC1 (ENSCLAG00000005682) #32	COMP (ENSCLAG00000005109) #33	UPF1 (ENSCLAG00000004037) #34	CERS1 (ENSCLAG00000003897) #36	COPE (ENSCLAG00000003621) #37	DDX49 (ENSCLAG00000012844)	HOMER3 (ENSCLAG00000011599)
Degu	MODERN SPECIES	323	ENSODEG00000012777	SLC5A5 (ENSODEG00000012721)	CCDC124 (ENSODEG00000013790)	KCNN1 (ENSODEG00000013162) #7	ARRDC2 (ENSODEG00000013689) #8	ENSODEG00000012843 #9	ENSODEG00000012781 #10	PIK3R2 (ENSODEG00000013440) #11	IFI30 (ENSODEG00000014388) #12	MPV17L2 (ENSODEG00000013238) #13	RAB3A (ENSODEG00000012269) #14	PDE4C (ENSODEG00000013172) #15	JUND (ENSODEG00000013414) #17	ENSODEG00000011712 #18	PGPEP1 (ENSODEG00000012364) #19	SSBP4 (ENSODEG00000012832) #22	ISYNA1 (ENSODEG00000011920) #23	ELL (ENSODEG00000012821) #24	ENSODEG00000013486 #25	ENSODEG00000012337 #27	REX1BD (ENSODEG00000013625) #28	CRLF1 (ENSODEG00000012883) #29	TMEM59L (ENSODEG00000012052) #30	KLHL26 (ENSODEG00000012544) #31	CRTC1 (ENSODEG00000011739) #32	COMP (ENSODEG00000015412) #33	UPF1 (ENSODEG00000012426) #34	GDF1 (ENSODEG00000011857) #35	CERS1 (ENSODEG00000011214) #36	COPE (ENSODEG00000011547) #37	DDX49 (ENSODEG00000011203)
Naked mole-rat female	MODERN SPECIES	21	KCNN1 (ENSHGLG00000002697) #7	ARRDC2 (ENSHGLG00000003087) #8	IL12RB1 (ENSHGLG00000029940) #9	MAST3 (ENSHGLG00000003256) #10	IFI30 (ENSHGLG00000001756) #12	ENSHGLG00000001889 #13	RAB3A (ENSHGLG00000040086) #14	PDE4C (ENSHGLG00000002262) #15	ENSHGLG00000037483 #16	ENSHGLG00000032754 #17	LSM4 (ENSHGLG00000006568) #18	PGPEP1 (ENSHGLG00000006686) #19	GDF15 (ENSHGLG00000032564) #21	LRRC25 (ENSHGLG00000038777) #20	ENSHGLG00000047162	ENSHGLG00000039382 #22	ENSHGLG00000046442	ISYNA1 (ENSHGLG00000010290) #23	ELL (ENSHGLG00000011254) #24	ENSHGLG00000047901 #24	ENSHGLG00000012226 #25	KXD1 (ENSHGLG00000044958) #26	UBA52 (ENSHGLG00000019381) ##27	REX1BD (ENSHGLG00000018788) #28	CRLF1 (ENSHGLG00000006747) #29	TMEM59L (ENSHGLG00000035873) #30	ENSHGLG00000041161 #31	COMP (ENSHGLG00000009575) #33	UPF1 (ENSHGLG00000010900) #34	GDF1 (ENSHGLG00000042377) #35	CERS1 (ENSHGLG00000013716) #36
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.k #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Eurasian red squirrel	MODERN SPECIES	7	KCNN1 (ENSSVLG00005025333) #7	ARRDC2 (ENSSVLG00005025348) #8	IL12RB1 (ENSSVLG00005025373) #9	MAST3 (ENSSVLG00005025404) #10	PIK3R2 (ENSSVLG00005025434) #11	IFI30 (ENSSVLG00005025456) #12	MPV17L2 (ENSSVLG00005025463) #13	RAB3A (ENSSVLG00005025472) #14	PDE4C (ENSSVLG00005025492) #15	ENSSVLG00005025525 #16	JUND (ENSSVLG00005025531) #17	LSM4 (ENSSVLG00005025539) #18	PGPEP1 (ENSSVLG00005025546) #19	GDF15 (ENSSVLG00005025552) #21	LRRC25 (ENSSVLG00005025559) #20	SSBP4 (ENSSVLG00005025573) #22	ISYNA1 (ENSSVLG00005025602) #23	ELL (ENSSVLG00005025617) #24	FKBP8 (ENSSVLG00005025627) #25	KXD1 (ENSSVLG00005025639) #26	UBA52 (ENSSVLG00005025643) #27	REX1BD (ENSSVLG00005015816) #28	CRLF1 (ENSSVLG00005015862) #29	TMEM59L (ENSSVLG00005015929) #30	KLHL26 (ENSSVLG00005015974) #31	CRTC1 (ENSSVLG00005016088) #32	COMP (ENSSVLG00005016356) #33	UPF1 (ENSSVLG00005016436) #34	CERS1 (ENSSVLG00005016494) #36	COPE (ENSSVLG00005016567) #37	DDX49 (ENSSVLG00005016654)
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.k #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Alpin marmot	MODERN SPECIES	24	CCDC124 (ENSMMMG00000000927)	KCNN1 (ENSMMMG00000000948) #7	ENSMMMG00000000971 #9	MAST3 (ENSMMMG00000000984) #10	ENSMMMG00000001094 #11	IFI30 (ENSMMMG00000001207) #12	MPV17L2 (ENSMMMG00000001276) #13	RAB3A (ENSMMMG00000001289) #14	ENSMMMG00000001307 #15	ENSMMMG00000001318 #15	ENSMMMG00000001330	ENSMMMG00000001343 #16	LSM4 (ENSMMMG00000001362) #18	PGPEP1 (ENSMMMG00000001398) #19	LRRC25 (ENSMMMG00000001420) #20	SSBP4 (ENSMMMG00000001427) #22	ISYNA1 (ENSMMMG00000001488) #23	ELL (ENSMMMG00000001572) #24	FKBP8 (ENSMMMG00000001633) #25	ENSMMMG00000001669 ##27	REX1BD (ENSMMMG00000001721) #28	CRLF1 (ENSMMMG00000001730) #29	ENSMMMG00000001749 #31	CRTC1 (ENSMMMG00000001771) #32	COMP (ENSMMMG00000001807) #33	UPF1 (ENSMMMG00000001874) #34	CERS1 (ENSMMMG00000002619) #36	COPE (ENSMMMG00000002634) #37	DDX49 (ENSMMMG00000002658)	HOMER3 (ENSMMMG00000002691)	SUGP2 (ENSMMMG00000002743)
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.k #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Squirrel	MODERN SPECIES	196	CCDC124 (ENSSTOG00000019634)	KCNN1 (ENSSTOG00000010735) #7	ARRDC2 (ENSSTOG00000002995) #8	MAST3 (ENSSTOG00000023373) #10	PIK3R2 (ENSSTOG00000001921) #11	IFI30 (ENSSTOG00000001939) #12	MPV17L2 (ENSSTOG00000023670) #13	RAB3A (ENSSTOG00000002981) #14	PDE4C (ENSSTOG00000000320) #15	ENSSTOG00000033779	IQCN (ENSSTOG00000025440) #16	LSM4 (ENSSTOG00000016494) #18	PGPEP1 (ENSSTOG00000003948) #19	GDF15 (ENSSTOG00000022430) #21	LRRC25 (ENSSTOG00000013485) #20	SSBP4 (ENSSTOG00000029026) #22	ISYNA1 (ENSSTOG00000022613) #23	ELL (ENSSTOG00000004646) #24	FKBP8 (ENSSTOG00000014068) #25	UBA52 (ENSSTOG00000004678) #27	REX1BD (ENSSTOG00000004692) #28	CRLF1 (ENSSTOG00000004708) #29	TMEM59L (ENSSTOG00000013508) #30	KLHL26 (ENSSTOG00000026260) #31	CRTC1 (ENSSTOG00000022992) #32	COMP (ENSSTOG00000026172) #33	UPF1 (ENSSTOG00000009196) #34	GDF1 (ENSSTOG00000020887) #35	CERS1 (ENSSTOG00000029010) #36	COPE (ENSSTOG00000006736) #37	DDX49 (ENSSTOG00000006749)
Arctic ground squirrel	MODERN SPECIES	73	KCNN1 (ENSUPAG00010018962) #7	ARRDC2 (ENSUPAG00010018949) #8	IL12RB1 (ENSUPAG00010018927) #9	MAST3 (ENSUPAG00010018814) #10	PIK3R2 (ENSUPAG00010018802) #11	IFI30 (ENSUPAG00010018797) #12	MPV17L2 (ENSUPAG00010018792) #13	RAB3A (ENSUPAG00010018778) #14	PDE4C (ENSUPAG00010018713) #15	ENSUPAG00010018681 #16	JUND (ENSUPAG00010018676) #17	ENSUPAG00010018660 #18	PGPEP1 (ENSUPAG00010018652) #19	GDF15 (ENSUPAG00010018644) #21	LRRC25 (ENSUPAG00010018637) #20	SSBP4 (ENSUPAG00010018547) #22	ISYNA1 (ENSUPAG00010018527) #23	ELL (ENSUPAG00010018509) #24	FKBP8 (ENSUPAG00010018474) #25	UBA52 (ENSUPAG00010018444) #27	REX1BD (ENSUPAG00010018419) #28	CRLF1 (ENSUPAG00010018403) #29	TMEM59L (ENSUPAG00010018396) #30	KLHL26 (ENSUPAG00010018384) #31	CRTC1 (ENSUPAG00010018349) #32	COMP (ENSUPAG00010018331) #33	UPF1 (ENSUPAG00010018302) #34	GDF1 (ENSUPAG00010018300) #35	CERS1 (ENSUPAG00010018294) #36	COPE (ENSUPAG00010018276) #37	DDX49 (ENSUPAG00010018246)
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00940000166941	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.b.k ##27	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.b.k ##27	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Lesser Egyptian jerboa	MODERN SPECIES	127	Kcnn1 (ENSJJAG00000020481) #7	Arrdc2 (ENSJJAG00000022083) #8	ENSJJAG00000012868 #9	Mast3 (ENSJJAG00000017856) #10	Pik3r2 (ENSJJAG00000009535) #11	Ifi30 (ENSJJAG00000015896) #12	Mpv17l2 (ENSJJAG00000017660) #13	Rab3a (ENSJJAG00000018501) #14	ENSJJAG00000010785	Iqcn (ENSJJAG00000019138) #16	Jund (ENSJJAG00000004780) #17	Lsm4 (ENSJJAG00000017420) #18	ENSJJAG00000015593	Gdf15 (ENSJJAG00000023889) #21	Lrrc25 (ENSJJAG00000018044) #20	Ssbp4 (ENSJJAG00000022395) #22	Isyna1 (ENSJJAG00000023621) #23	ENSJJAG00000018151	Ell (ENSJJAG00000015761) #24	Fkbp8 (ENSJJAG00000012734) #25	ENSJJAG00000016159 #26	ENSJJAG00000005654 ##27	Rex1bd (ENSJJAG00000013226) #28	Crlf1 (ENSJJAG00000023822) #29	Tmem59l (ENSJJAG00000015054) #30	Klhl26 (ENSJJAG00000015486) #31	Crtc1 (ENSJJAG00000014073) #32	Comp (ENSJJAG00000011685) #33	Upf1 (ENSJJAG00000023151) #34	ENSJJAG00000000262 #35	ENSJJAG00000016264 #36
Muroidea	ANCESTRAL SPECIES	47	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Chinese hamster chok1gshd	MODERN SPECIES	184	Arrdc2 (ENSCGRG00001016751) #8	Il12rb1 (ENSCGRG00001020218) #9	Mast3 (ENSCGRG00001005931) #10	Pik3r2 (ENSCGRG00001017940) #11	Ifi30 (ENSCGRG00001020539) #12	Mpv17l2 (ENSCGRG00001017497) #13	Rab3a (ENSCGRG00001021376) #14	Pde4c (ENSCGRG00001018842) #15	Gm3336 (ENSCGRG00001023238)	Iqcn (ENSCGRG00001004411) #16	Jund (ENSCGRG00001010573) #17	Lsm4 (ENSCGRG00001014436) #18	Pgpep1 (ENSCGRG00001016516) #19	Gdf15 (ENSCGRG00001016811) #21	Lrrc25 (ENSCGRG00001015091) #20	Ssbp4 (ENSCGRG00001016735) #22	Isyna1 (ENSCGRG00001022885) #23	Ell (ENSCGRG00001009009) #24	Fkbp8 (ENSCGRG00001012652) #25	Uba52 (ENSCGRG00001018293) #27	Rex1bd (ENSCGRG00001023832) #28	Crlf1 (ENSCGRG00001017905) #29	Tmem59l (ENSCGRG00001018799) #30	Klhl26 (ENSCGRG00001020014) #31	Crtc1 (ENSCGRG00001002202) #32	Comp (ENSCGRG00001009171) #33	Upf1 (ENSCGRG00001021067) #34	ENSCGRG00001006921 #35	ENSCGRG00001019774 #36	COPE (ENSCGRG00001024248) #37	Ddx49 (ENSCGRG00001009467)
Golden Hamster	MODERN SPECIES	831	Il12rb1 (ENSMAUG00000015517) #9	Mast3 (ENSMAUG00000003343) #10	ENSMAUG00000021154 #11	ENSMAUG00000016916 #11	Ifi30 (ENSMAUG00000016704) #12	Mpv17l2 (ENSMAUG00000001144) #13	Rab3a (ENSMAUG00000005339) #14	Pde4c (ENSMAUG00000016880) #15	Gm3336 (ENSMAUG00000001502)	Iqcn (ENSMAUG00000021279) #16	Jund (ENSMAUG00000019892) #17	ENSMAUG00000018936	Pgpep1 (ENSMAUG00000020690) #19	Gdf15 (ENSMAUG00000014895) #21	Lrrc25 (ENSMAUG00000018197) #20	Ssbp4 (ENSMAUG00000011895) #22	Isyna1 (ENSMAUG00000021573) #23	Ell (ENSMAUG00000014805) #24	Fkbp8 (ENSMAUG00000010945) #25	Uba52 (ENSMAUG00000002775) #27	Rex1bd (ENSMAUG00000015830) #28	Crlf1 (ENSMAUG00000021052) #29	Tmem59l (ENSMAUG00000006146) #30	Klhl26 (ENSMAUG00000021352) #31	Crtc1 (ENSMAUG00000019225) #32	Comp (ENSMAUG00000010602) #33	Upf1 (ENSMAUG00000011398) #34	ENSMAUG00000012872 #35	ENSMAUG00000011350 #36	Cope (ENSMAUG00000016322) #37	Ddx49 (ENSMAUG00000010235)
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Prairie vole	MODERN SPECIES	164	Arrdc2 (ENSMOCG00000006806) #8	Il12rb1 (ENSMOCG00000000603) #9	Mast3 (ENSMOCG00000018587) #10	ENSMOCG00000019717 #11	Ifi30 (ENSMOCG00000001163) #12	Mpv17l2 (ENSMOCG00000009680) #13	Rab3a (ENSMOCG00000016750) #14	Pde4c (ENSMOCG00000015883) #15	Gm3336 (ENSMOCG00000017470)	Iqcn (ENSMOCG00000009272) #16	Jund (ENSMOCG00000005294) #17	Lsm4 (ENSMOCG00000020861) #18	Pgpep1 (ENSMOCG00000019971) #19	Gdf15 (ENSMOCG00000000065) #21	Lrrc25 (ENSMOCG00000000947) #20	Ssbp4 (ENSMOCG00000019818) #22	ENSMOCG00000013794 #23	Ell (ENSMOCG00000013489) #24	Fkbp8 (ENSMOCG00000015712) #25	Uba52 (ENSMOCG00000015677) #27	Rex1bd (ENSMOCG00000014306) #28	Crlf1 (ENSMOCG00000007746) #29	Tmem59l (ENSMOCG00000010649) #30	Klhl26 (ENSMOCG00000017635) #31	Crtc1 (ENSMOCG00000005553) #32	Comp (ENSMOCG00000004567) #33	Upf1 (ENSMOCG00000005699) #34	ENSMOCG00000000275 #35	ENSMOCG00000004861 #36	Cope (ENSMOCG00000014940) #37	Ddx49 (ENSMOCG00000018690)
Northern American deer mouse	MODERN SPECIES	8	Kcnn1 (ENSPEMG00000011392) #7	ENSPEMG00000005917 #8	Il12rb1 (ENSPEMG00000004871) #9	ENSPEMG00000018323 #10	ENSPEMG00000029300	Pik3r2 (ENSPEMG00000013483) #11	Ifi30 (ENSPEMG00000016976) #12	Rab3a (ENSPEMG00000021028) #14	ENSPEMG00000008172 #15	ENSPEMG00000010765	ENSPEMG00000025156 #16	Jund (ENSPEMG00000005556) #17	Lsm4 (ENSPEMG00000001358) #18	Pgpep1 (ENSPEMG00000015017) #19	Lrrc25 (ENSPEMG00000012960) #20	Ssbp4 (ENSPEMG00000016738) #22	Isyna1 (ENSPEMG00000010118) #23	Ell (ENSPEMG00000006782) #24	Fkbp8 (ENSPEMG00000008423) #25	ENSPEMG00000018177 ##27	Rex1bd (ENSPEMG00000017857) #28	Crlf1 (ENSPEMG00000010464) #29	Tmem59l (ENSPEMG00000014170) #30	Klhl26 (ENSPEMG00000016863) #31	Crtc1 (ENSPEMG00000005110) #32	Comp (ENSPEMG00000019103) #33	Upf1 (ENSPEMG00000001085) #34	ENSPEMG00000029913 #35	ENSPEMG00000012430 #36	Cope (ENSPEMG00000018557) #37	Ddx49 (ENSPEMG00000009238)
Murinae	ANCESTRAL SPECIES	23	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Mouse	MODERN SPECIES	17	Arrdc2 (ENSMUSG00000002910) #8	Il12rb1 (ENSMUSG00000000791) #9	Mast3 (ENSMUSG00000031833) #10	Pik3r2 (ENSMUSG00000031834) #11	Ifi30 (ENSMUSG00000031838) #12	Mpv17l2 (ENSMUSG00000035559) #13	Rab3a (ENSMUSG00000031840) #14	Pde4c (ENSMUSG00000031842) #15	Gm3336 (ENSMUSG00000095026)	Iqcn (ENSMUSG00000110622) #16	Jund (ENSMUSG00000071076) #17	Lsm4 (ENSMUSG00000031848) #18	Pgpep1 (ENSMUSG00000056204) #19	Gdf15 (ENSMUSG00000038508) #21	Lrrc25 (ENSMUSG00000049988) #20	Ssbp4 (ENSMUSG00000070003) #22	Isyna1 (ENSMUSG00000019139) #23	Ell (ENSMUSG00000070002) #24	Fkbp8 (ENSMUSG00000019428) #25	Kxd1 (ENSMUSG00000055553) ##27	Uba52 (ENSMUSG00000090137) #27	Rex1bd (ENSMUSG00000058833) #28	Crlf1 (ENSMUSG00000007888) #29	Tmem59l (ENSMUSG00000035964) #30	Klhl26 (ENSMUSG00000055707) #31	Crtc1 (ENSMUSG00000003575) #32	Comp (ENSMUSG00000031849) #33	Upf1 (ENSMUSG00000058301) #34	Gdf1 (ENSMUSG00000109523) #35	Cers1 (ENSMUSG00000087408) #35	Cope (ENSMUSG00000055681) #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00680000100785	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
spretus	MODERN SPECIES	17	Arrdc2 (MGP_SPRETEiJ_G0032287) #8	Il12rb1 (MGP_SPRETEiJ_G0032286) #9	Mast3 (MGP_SPRETEiJ_G0032285) #10	Pik3r2 (MGP_SPRETEiJ_G0032284) #11	Ifi30 (MGP_SPRETEiJ_G0032283) #12	Mpv17l2 (MGP_SPRETEiJ_G0032282) #13	Rab3a (MGP_SPRETEiJ_G0032281) #14	Pde4c (MGP_SPRETEiJ_G0032280) #15	Gm3336 (MGP_SPRETEiJ_G0032279)	MGP_SPRETEiJ_G0032278	Jund (MGP_SPRETEiJ_G0032277) #17	Lsm4 (MGP_SPRETEiJ_G0032276) #18	Pgpep1 (MGP_SPRETEiJ_G0032275) #19	Gdf15 (MGP_SPRETEiJ_G0032274) #21	Lrrc25 (MGP_SPRETEiJ_G0032273) #20	Ssbp4 (MGP_SPRETEiJ_G0032272) #22	Isyna1 (MGP_SPRETEiJ_G0032271) #23	Ell (MGP_SPRETEiJ_G0032270) #24	Fkbp8 (MGP_SPRETEiJ_G0032269) #25	MGP_SPRETEiJ_G0032268 #27	MGP_SPRETEiJ_G0032267 #27	Rex1bd (MGP_SPRETEiJ_G0032266) #28	Crlf1 (MGP_SPRETEiJ_G0032265) #29	Tmem59l (MGP_SPRETEiJ_G0032264) #30	Klhl26 (MGP_SPRETEiJ_G0032263) #31	Crtc1 (MGP_SPRETEiJ_G0032262) #32	Comp (MGP_SPRETEiJ_G0032261) #33	Upf1 (MGP_SPRETEiJ_G0032260) #34	MGP_SPRETEiJ_G0032259 #35	Cope (MGP_SPRETEiJ_G0032258) #37	Ddx49 (MGP_SPRETEiJ_G0032257)
Steppe mouse	MODERN SPECIES	2734	Kcnn1 (ENSMSIG00000032083) #7	Arrdc2 (ENSMSIG00000032082) #8	Il12rb1 (ENSMSIG00000032081) #9	Mast3 (ENSMSIG00000032079) #10	Pik3r2 (ENSMSIG00000032078) #11	Ifi30 (ENSMSIG00000032077) #12	Mpv17l2 (ENSMSIG00000032076) #13	Rab3a (ENSMSIG00000032075) #14	Pde4c (ENSMSIG00000032074) #15	Gm3336 (ENSMSIG00000032073)	Iqcn (ENSMSIG00000032072) #16	ENSMSIG00000032071 #18	Pgpep1 (ENSMSIG00000032070) #19	Gdf15 (ENSMSIG00000032069) #21	Lrrc25 (ENSMSIG00000032068) #20	Ssbp4 (ENSMSIG00000032067) #22	Isyna1 (ENSMSIG00000032066) #23	Ell (ENSMSIG00000032065) #24	ENSMSIG00000032064 #25	ENSMSIG00000032063 #26	ENSMSIG00000032062 #28	Crlf1 (ENSMSIG00000032061) #29	Tmem59l (ENSMSIG00000032060) #30	Klhl26 (ENSMSIG00000032059) #31	Crtc1 (ENSMSIG00000032058) #32	Comp (ENSMSIG00000032057) #33	Upf1 (ENSMSIG00000032056) #34	ENSMSIG00000032055 #35	ENSMSIG00000032054 #36	Cope (ENSMSIG00000032053) #37	Ddx49 (ENSMSIG00000032052)
Ryukyu mouse	MODERN SPECIES	17	Arrdc2 (MGP_CAROLIEiJ_G0031169) #8	Il12rb1 (MGP_CAROLIEiJ_G0031168) #9	Mast3 (MGP_CAROLIEiJ_G0031167) #10	Pik3r2 (MGP_CAROLIEiJ_G0031166) #11	Ifi30 (MGP_CAROLIEiJ_G0031165) #12	Mpv17l2 (MGP_CAROLIEiJ_G0031164) #13	Rab3a (MGP_CAROLIEiJ_G0031163) #14	Pde4c (MGP_CAROLIEiJ_G0031162) #15	Gm3336 (MGP_CAROLIEiJ_G0031161)	MGP_CAROLIEiJ_G0031160	Jund (MGP_CAROLIEiJ_G0031159) #17	Lsm4 (MGP_CAROLIEiJ_G0031158) #18	Pgpep1 (MGP_CAROLIEiJ_G0031157) #19	Gdf15 (MGP_CAROLIEiJ_G0031156) #21	Lrrc25 (MGP_CAROLIEiJ_G0031155) #20	Ssbp4 (MGP_CAROLIEiJ_G0031154) #22	Isyna1 (MGP_CAROLIEiJ_G0031153) #23	Ell (MGP_CAROLIEiJ_G0031152) #24	Fkbp8 (MGP_CAROLIEiJ_G0031151) #25	MGP_CAROLIEiJ_G0031150 #27	MGP_CAROLIEiJ_G0031149 #27	Rex1bd (MGP_CAROLIEiJ_G0031148) #28	Crlf1 (MGP_CAROLIEiJ_G0031147) #29	Tmem59l (MGP_CAROLIEiJ_G0031146) #30	Klhl26 (MGP_CAROLIEiJ_G0031145) #31	Crtc1 (MGP_CAROLIEiJ_G0031144) #32	Comp (MGP_CAROLIEiJ_G0031143) #33	Upf1 (MGP_CAROLIEiJ_G0031142) #34	MGP_CAROLIEiJ_G0031141 #35	Cope (MGP_CAROLIEiJ_G0031140) #37	Ddx49 (MGP_CAROLIEiJ_G0031139)
Shrew mouse	MODERN SPECIES	10	Arrdc2 (MGP_PahariEiJ_G0021634) #8	Il12rb1 (MGP_PahariEiJ_G0021633) #9	Mast3 (MGP_PahariEiJ_G0021632) #10	Pik3r2 (MGP_PahariEiJ_G0021631) #11	Ifi30 (MGP_PahariEiJ_G0021630) #12	Mpv17l2 (MGP_PahariEiJ_G0021629) #13	Rab3a (MGP_PahariEiJ_G0021628) #14	Pde4c (MGP_PahariEiJ_G0021627) #15	MGP_PahariEiJ_G0021626	MGP_PahariEiJ_G0021625	Jund (MGP_PahariEiJ_G0021624) #17	Lsm4 (MGP_PahariEiJ_G0021623) #18	Pgpep1 (MGP_PahariEiJ_G0021622) #19	Gdf15 (MGP_PahariEiJ_G0021621) #21	Lrrc25 (MGP_PahariEiJ_G0021620) #20	Ssbp4 (MGP_PahariEiJ_G0021619) #22	Isyna1 (MGP_PahariEiJ_G0021618) #23	Ell (MGP_PahariEiJ_G0021617) #24	Fkbp8 (MGP_PahariEiJ_G0021616) #25	MGP_PahariEiJ_G0021615 ##27	MGP_PahariEiJ_G0021614 ##27	Rex1bd (MGP_PahariEiJ_G0021613) #28	Crlf1 (MGP_PahariEiJ_G0021612) #29	Tmem59l (MGP_PahariEiJ_G0021611) #30	Klhl26 (MGP_PahariEiJ_G0021610) #31	Crtc1 (MGP_PahariEiJ_G0021609) #32	Comp (MGP_PahariEiJ_G0021608) #33	Upf1 (MGP_PahariEiJ_G0021607) #34	MGP_PahariEiJ_G0021606 #35	Cope (MGP_PahariEiJ_G0021605) #37	Ddx49 (MGP_PahariEiJ_G0021604)
Rat	MODERN SPECIES	7	Il12rb1 (ENSRNOG00000019216) #9	Mast3 (ENSRNOG00000022753) #10	Pik3r2 (ENSRNOG00000019228) #11	Ifi30 (ENSRNOG00000019387) #12	Mpv17l2 (ENSRNOG00000019394) #13	Rab3a (ENSRNOG00000019433) #14	Pde4c (ENSRNOG00000019518) #15	LOC120093089 (ENSRNOG00000043249)	Iqcn (ENSRNOG00000068146) #16	Jund (ENSRNOG00000019568) #17	Lsm4 (ENSRNOG00000019572) #18	Pgpep1 (ENSRNOG00000019639) #19	Mk1 (ENSRNOG00000019657)	Gdf15 (ENSRNOG00000019661) #21	Lrrc25 (ENSRNOG00000022565) #20	Ssbp4 (ENSRNOG00000019698) #22	Isyna1 (ENSRNOG00000019741) #23	Ell (ENSRNOG00000019824) #24	Fkbp8 (ENSRNOG00000058359) #25	Uba52 (ENSRNOG00000019971) #27	Rex1bd (ENSRNOG00000019990) #28	Crlf1 (ENSRNOG00000020030) #29	Tmem59l (ENSRNOG00000022432) #30	Klhl26 (ENSRNOG00000020088) #31	Crtc1 (ENSRNOG00000022421) #32	Comp (ENSRNOG00000048472) #33	Upf1 (ENSRNOG00000020134) #34	Gdf1 (ENSRNOG00000070518) #35	Cers1 (ENSRNOG00000067124) #36	Cope (ENSRNOG00000020178) #37	Ddx49 (ENSRNOG00000022368)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Il12rb1 (ENSNGAG00000005757) #9	ENSNGAG00000014676 #10	ENSNGAG00000022605 #11	ENSNGAG00000019677 #11	Ifi30 (ENSNGAG00000022275) #12	Mpv17l2 (ENSNGAG00000012070) #13	Rab3a (ENSNGAG00000020872) #14	Pde4c (ENSNGAG00000004214) #15	ENSNGAG00000014618	Iqcn (ENSNGAG00000014525) #16	Jund (ENSNGAG00000010099) #17	Lsm4 (ENSNGAG00000008644) #18	Pgpep1 (ENSNGAG00000022241) #19	Gdf15 (ENSNGAG00000019410) #21	Lrrc25 (ENSNGAG00000018288) #20	Ssbp4 (ENSNGAG00000023633) #22	Isyna1 (ENSNGAG00000013546) #23	Ell (ENSNGAG00000004302) #24	Fkbp8 (ENSNGAG00000001505) #25	Uba52 (ENSNGAG00000010884) #27	Rex1bd (ENSNGAG00000013627) #28	Crlf1 (ENSNGAG00000022169) #29	Tmem59l (ENSNGAG00000020797) #30	Klhl26 (ENSNGAG00000010743) #31	Crtc1 (ENSNGAG00000021475) #32	Comp (ENSNGAG00000024332) #33	Upf1 (ENSNGAG00000024107) #34	ENSNGAG00000022538 #35	ENSNGAG00000022292 #36	Cope (ENSNGAG00000022394) #37	Ddx49 (ENSNGAG00000019673)
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Suina	ANCESTRAL SPECIES	39	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Chacoan peccary	MODERN SPECIES	769	KCNN1 (ENSCWAG00000017010) #7	ARRDC2 (ENSCWAG00000017075) #8	IL12RB1 (ENSCWAG00000017201) #9	MAST3 (ENSCWAG00000017331) #10	PIK3R2 (ENSCWAG00000017529) #11	IFI30 (ENSCWAG00000017658) #12	MPV17L2 (ENSCWAG00000017714) #13	RAB3A (ENSCWAG00000017742) #14	PDE4C (ENSCWAG00000017847) #15	ENSCWAG00000018273 #16	JUND (ENSCWAG00000018303) #17	LSM4 (ENSCWAG00000018311) #18	PGPEP1 (ENSCWAG00000018354) #19	GDF15 (ENSCWAG00000018499) #21	LRRC25 (ENSCWAG00000018518) #20	SSBP4 (ENSCWAG00000018544) #22	ISYNA1 (ENSCWAG00000018620) #23	ELL (ENSCWAG00000018746) #24	FKBP8 (ENSCWAG00000018780) #25	KXD1 (ENSCWAG00000018851) #26	UBA52 (ENSCWAG00000018816) #27	REX1BD (ENSCWAG00000018868) #28	ENSCWAG00000018899	CRLF1 (ENSCWAG00000018917) #29	TMEM59L (ENSCWAG00000018953) #30	KLHL26 (ENSCWAG00000018976) #31	CRTC1 (ENSCWAG00000019030) #32	COMP (ENSCWAG00000019235) #33	UPF1 (ENSCWAG00000019458) #34	GDF1 (ENSCWAG00000019490) #35	CERS1 (ENSCWAG00000019515) #36
Pig	MODERN SPECIES	10	KCNN1 (ENSSSCG00000013892) #7	ARRDC2 (ENSSSCG00000013893) #8	IL12RB1 (ENSSSCG00000013894) #9	MAST3 (ENSSSCG00000013895) #10	PIK3R2 (ENSSSCG00000013900) #11	IFI30 (ENSSSCG00000013901) #12	MPV17L2 (ENSSSCG00000013896) #13	RAB3A (ENSSSCG00000013897) #14	PDE4C (ENSSSCG00000036363) #15	ENSSSCG00000013902	ENSSSCG00000053451 #16	LSM4 (ENSSSCG00000034314) #18	PGPEP1 (ENSSSCG00000039684) #19	GDF15 (ENSSSCG00000034260) #21	LRRC25 (ENSSSCG00000036963) #20	SSBP4 (ENSSSCG00000025955) #22	ISYNA1 (ENSSSCG00000040524) #23	ENSSSCG00000043019	ELL (ENSSSCG00000040181) #24	FKBP8 (ENSSSCG00000013905) #25	KXD1 (ENSSSCG00000013906) #26	UBA52 (ENSSSCG00000053292) #27	REX1BD (ENSSSCG00000040666) #28	CRLF1 (ENSSSCG00000013909) #29	TMEM59L (ENSSSCG00000013911) #30	KLHL26 (ENSSSCG00000013913) #31	CRTC1 (ENSSSCG00000013915) #32	COMP (ENSSSCG00000013916) #33	UPF1 (ENSSSCG00000039301) #34	CERS1 (ENSSSCG00000013928) #36	COPE (ENSSSCG00000027840) #37
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Camelidae	ANCESTRAL SPECIES	64	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192.q #26	ENSGT00940000153593.c.a #27	ENSGT00530000064192.r #26	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Arabian camel	MODERN SPECIES	14	ARRDC2 (ENSCDRG00005012675) #8	IL12RB1 (ENSCDRG00005012582) #9	MAST3 (ENSCDRG00005012259) #10	PIK3R2 (ENSCDRG00005011973) #11	IFI30 (ENSCDRG00005011860) #12	MPV17L2 (ENSCDRG00005011813) #13	RAB3A (ENSCDRG00005011718) #14	PDE4C (ENSCDRG00005011492) #15	ENSCDRG00005011454	ENSCDRG00005011380 #16	LSM4 (ENSCDRG00005011254) #18	PGPEP1 (ENSCDRG00005011120) #19	GDF15 (ENSCDRG00005011075) #21	LRRC25 (ENSCDRG00005011039) #20	ISYNA1 (ENSCDRG00005010835) #23	SSBP4 (ENSCDRG00005010596) #22	ELL (ENSCDRG00005010516) #24	FKBP8 (ENSCDRG00005010447) #25	ENSCDRG00005010351 #26	UBA52 (ENSCDRG00005010272) #27	REX1BD (ENSCDRG00005010167) #28	CRLF1 (ENSCDRG00005010053) #29	TMEM59L (ENSCDRG00005009996) #30	KLHL26 (ENSCDRG00005009944) #31	CRTC1 (ENSCDRG00005009334) #32	COMP (ENSCDRG00005009080) #33	UPF1 (ENSCDRG00005008931) #34	CERS1 (ENSCDRG00005013600) #36	COPE (ENSCDRG00005013441) #37	DDX49 (ENSCDRG00005013373)	HOMER3 (ENSCDRG00005013258)
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00940000166941	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173.a.a #18	ENSGT00610000086173.b #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173.a.a #18	ENSGT00610000086173.b #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173.b #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.b ##27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000153593.c.a #27	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173.b #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.b ##27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Narwhal	MODERN SPECIES	298	ARRDC2 (ENSMMNG00015000567) #8	IL12RB1 (ENSMMNG00015000529) #9	MAST3 (ENSMMNG00015000302) #10	PIK3R2 (ENSMMNG00015000176) #11	IFI30 (ENSMMNG00015000120) #12	MPV17L2 (ENSMMNG00015000089) #13	RAB3A (ENSMMNG00015000026) #14	PDE4C (ENSMMNG00015008093) #15	ENSMMNG00015008048 #16	JUND (ENSMMNG00015008033) #17	ENSMMNG00015008004 #18	ENSMMNG00015007982	PGPEP1 (ENSMMNG00015007946) #19	GDF15 (ENSMMNG00015007911) #21	LRRC25 (ENSMMNG00015007891) #20	SSBP4 (ENSMMNG00015007789) #22	ISYNA1 (ENSMMNG00015007654) #23	ELL (ENSMMNG00015007605) #24	FKBP8 (ENSMMNG00015007578) #25	KXD1 (ENSMMNG00015007547) #26	ENSMMNG00015007512 ##27	REX1BD (ENSMMNG00015007469) #28	CRLF1 (ENSMMNG00015007421) #29	TMEM59L (ENSMMNG00015007375) #30	KLHL26 (ENSMMNG00015007349) #31	CRTC1 (ENSMMNG00015007220) #32	COMP (ENSMMNG00015007143) #33	UPF1 (ENSMMNG00015007103) #34	GDF1 (ENSMMNG00015007086) #35	CERS1 (ENSMMNG00015007051) #36	COPE (ENSMMNG00015007007) #37
Beluga whale	MODERN SPECIES	27	KCNN1 (ENSDLEG00000005628) #7	ARRDC2 (ENSDLEG00000005651) #8	IL12RB1 (ENSDLEG00000005677) #9	MAST3 (ENSDLEG00000005703) #10	PIK3R2 (ENSDLEG00000005809) #11	ENSDLEG00000005840 #12	MPV17L2 (ENSDLEG00000005851) #13	RAB3A (ENSDLEG00000005860) #14	PDE4C (ENSDLEG00000005873) #15	KIAA1683 (ENSDLEG00000005933) #16	JUND (ENSDLEG00000005939) #17	LSM4 (ENSDLEG00000005942) #18	PGPEP1 (ENSDLEG00000005952) #19	GDF15 (ENSDLEG00000005966) #21	LRRC25 (ENSDLEG00000005971) #20	SSBP4 (ENSDLEG00000005979) #22	ISYNA1 (ENSDLEG00000005989) #23	ELL (ENSDLEG00000006014) #24	FKBP8 (ENSDLEG00000006024) #25	KXD1 (ENSDLEG00000006030) #26	UBA52 (ENSDLEG00000006044) ##27	REX1BD (ENSDLEG00000006050) #28	ENSDLEG00000006057	CRLF1 (ENSDLEG00000006067) #29	TMEM59L (ENSDLEG00000006084) #30	KLHL26 (ENSDLEG00000006086) #31	CRTC1 (ENSDLEG00000006096) #32	COMP (ENSDLEG00000006134) #33	UPF1 (ENSDLEG00000006145) #34	GDF1 (ENSDLEG00000006157) #35	CERS1 (ENSDLEG00000006163) #36
Vaquita	MODERN SPECIES	14	KCNN1 (ENSPSNG00000003747) #7	ARRDC2 (ENSPSNG00000003708) #8	IL12RB1 (ENSPSNG00000003645) #9	MAST3 (ENSPSNG00000003577) #10	PIK3R2 (ENSPSNG00000003482) #11	ENSPSNG00000003439 #12	MPV17L2 (ENSPSNG00000003411) #13	RAB3A (ENSPSNG00000003382) #14	PDE4C (ENSPSNG00000003220) #15	ENSPSNG00000003167 #16	JUND (ENSPSNG00000003153) #17	ENSPSNG00000003131 #18	PGPEP1 (ENSPSNG00000003067) #19	GDF15 (ENSPSNG00000003041) #21	LRRC25 (ENSPSNG00000003029) #20	SSBP4 (ENSPSNG00000002994) #22	ISYNA1 (ENSPSNG00000002918) #23	ELL (ENSPSNG00000002839) #24	FKBP8 (ENSPSNG00000002784) #25	KXD1 (ENSPSNG00000002749) #26	ENSPSNG00000002729	REX1BD (ENSPSNG00000002705) #28	UBA52 (ENSPSNG00000002675) #27	CRLF1 (ENSPSNG00000002653) #29	TMEM59L (ENSPSNG00000002614) #30	KLHL26 (ENSPSNG00000002575) #31	CRTC1 (ENSPSNG00000002462) #32	COMP (ENSPSNG00000002298) #33	UPF1 (ENSPSNG00000002213) #34	GDF1 (ENSPSNG00000002175) #35	CERS1 (ENSPSNG00000002156) #36
Dolphin	MODERN SPECIES	256													PGPEP1 (ENSTTRG00000004348) #19	GDF15 (ENSTTRG00000004361) #21	LRRC25 (ENSTTRG00000004365) #20	SSBP4 (ENSTTRG00000004368) #22	ISYNA1 (ENSTTRG00000004380) #23
Sperm whale	MODERN SPECIES	62														GDF15 (ENSPCTG00005022065) #21	LRRC25 (ENSPCTG00005022056) #20	SSBP4 (ENSPCTG00005022023) #22	ISYNA1 (ENSPCTG00005022012) #23	ELL (ENSPCTG00005021989) #24
Blue whale	MODERN SPECIES	14	IL12RB1 (ENSBMSG00010004817) #9	MAST3 (ENSBMSG00010004789) #10	PIK3R2 (ENSBMSG00010004761) #11	ENSBMSG00010004729 #12	MPV17L2 (ENSBMSG00010004722) #13	RAB3A (ENSBMSG00010004711) #14	PDE4C (ENSBMSG00010004659) #15	ENSBMSG00010004630	ENSBMSG00010004618 #16	JUND (ENSBMSG00010004609) #17	LSM4 (ENSBMSG00010004583) #18	PGPEP1 (ENSBMSG00010004554) #19	ENSBMSG00010004531	GDF15 (ENSBMSG00010004519) #21	LRRC25 (ENSBMSG00010004508) #20	SSBP4 (ENSBMSG00010004477) #22	ISYNA1 (ENSBMSG00010004428) #23	ELL (ENSBMSG00010004392) #24	FKBP8 (ENSBMSG00010004359) #25	KXD1 (ENSBMSG00010004344) #26	UBA52 (ENSBMSG00010004333) #27	REX1BD (ENSBMSG00010004317) #28	CRLF1 (ENSBMSG00010004297) #29	TMEM59L (ENSBMSG00010004290) #30	KLHL26 (ENSBMSG00010004285) #31	CRTC1 (ENSBMSG00010004257) #32	COMP (ENSBMSG00010004199) #33	UPF1 (ENSBMSG00010004141) #34	GDF1 (ENSBMSG00010004120) #35	CERS1 (ENSBMSG00010004105) #36	COPE (ENSBMSG00010004064) #37
Pecora	ANCESTRAL SPECIES		ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Percora_a	ANCESTRAL SPECIES		ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.q.b #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Caprinae	ANCESTRAL SPECIES	32	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.q.b #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Goat	MODERN SPECIES	26	KCNN1 (ENSCHIG00000014377) #7	ARRDC2 (ENSCHIG00000007606) #8	IL12RB1 (ENSCHIG00000027177) #9	MAST3 (ENSCHIG00000026065) #10	PIK3R2 (ENSCHIG00000005705) #11	IFI30 (ENSCHIG00000005544) #12	ENSCHIG00000010984	RAB3A (ENSCHIG00000007327) #14	MPV17L2 (ENSCHIG00000025758) #13	PDE4C (ENSCHIG00000020852) #15	ENSCHIG00000008980	LSM4 (ENSCHIG00000010928) #18	PGPEP1 (ENSCHIG00000026514) #19	GDF15 (ENSCHIG00000027142) #21	LRRC25 (ENSCHIG00000023973) #20	SSBP4 (ENSCHIG00000021686) #22	ISYNA1 (ENSCHIG00000023057) #23	ELL (ENSCHIG00000018044) #24	FKBP8 (ENSCHIG00000013446) #25	KXD1 (ENSCHIG00000027154) #26	ENSCHIG00000024401 ##27	REX1BD (ENSCHIG00000025942) #28	CRLF1 (ENSCHIG00000014402) #29	TMEM59L (ENSCHIG00000001269) #30	KLHL26 (ENSCHIG00000009198) #31	CRTC1 (ENSCHIG00000020510) #32	COMP (ENSCHIG00000015152) #33	UPF1 (ENSCHIG00000011018) #34	GDF1 (ENSCHIG00000026655) #35	CERS1 (ENSCHIG00000021209) #36	COPE (ENSCHIG00000019197) #37
Rambouillet Sheep	MODERN SPECIES	21	KCNN1 (ENSOARG00020006098) #7	ARRDC2 (ENSOARG00020006027) #8	IL12RB1 (ENSOARG00020005715) #9	MAST3 (ENSOARG00020005583) #10	PIK3R2 (ENSOARG00020005480) #11	IFI30 (ENSOARG00020005418) #12	MPV17L2 (ENSOARG00020005392) #13	RAB3A (ENSOARG00020005307) #14	PDE4C (ENSOARG00020004959) #15	ENSOARG00020004884 #16	JUND (ENSOARG00020004870) #17	LSM4 (ENSOARG00020004808) #18	PGPEP1 (ENSOARG00020004669) #19	GDF15 (ENSOARG00020004638) #21	LRRC25 (ENSOARG00020004617) #20	SSBP4 (ENSOARG00020004580) #22	ISYNA1 (ENSOARG00020004475) #23	ELL (ENSOARG00020004406) #24	FKBP8 (ENSOARG00020004369) #25	KXD1 (ENSOARG00020004349) #26	UBA52 (ENSOARG00020004308) #27	REX1BD (ENSOARG00020004269) #28	CRLF1 (ENSOARG00020004211) #29	TMEM59L (ENSOARG00020004177) #30	KLHL26 (ENSOARG00020004115) #31	CRTC1 (ENSOARG00020003966) #32	COMP (ENSOARG00020003569) #33	UPF1 (ENSOARG00020003352) #34	CERS1 (ENSOARG00020021615) #36	DDX49 (ENSOARG00020021548)	ENSOARG00020021129
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.q.b #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Bos	ANCESTRAL SPECIES	34	ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.q.b #25	ENSGT00530000064192.s #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Bos_a	ANCESTRAL SPECIES	29	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT01100000263504.b.t	ENSGT00390000012138.b	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.q.b #25	ENSGT00530000064192.s #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT01030000234515.b #36	ENSGT00390000003478 #37	ENSGT00730000111231
Domestic yak	MODERN SPECIES	27	ARRDC2 (ENSBGRG00000026092) #8	IL12RB1 (ENSBGRG00000026103) #9	MAST3 (ENSBGRG00000026128) #10	PIK3R2 (ENSBGRG00000026150) #11	ENSBGRG00000026165 #12	MPV17L2 (ENSBGRG00000026182) #13	RAB3A (ENSBGRG00000026189) #14	PDE4C (ENSBGRG00000026196) #15	ENSBGRG00000026213	JUND (ENSBGRG00000026238) #17	LSM4 (ENSBGRG00000026242) #18	ENSBGRG00000026247	PGPEP1 (ENSBGRG00000026256) #19	GDF15 (ENSBGRG00000026276) #21	LRRC25 (ENSBGRG00000026281) #20	SSBP4 (ENSBGRG00000026307) #22	ISYNA1 (ENSBGRG00000026356) #23	ELL (ENSBGRG00000026367) #24	ENSBGRG00000026374	ENSBGRG00000026382 #25	ENSBGRG00000026397 #26	ENSBGRG00000026400 ##27	ENSBGRG00000026408 #28	CRLF1 (ENSBGRG00000000399) #29	TMEM59L (ENSBGRG00000000427) #30	KLHL26 (ENSBGRG00000000466) #31	CRTC1 (ENSBGRG00000000542) #32	COMP (ENSBGRG00000000772) #33	UPF1 (ENSBGRG00000000885) #34	CERS1 (ENSBGRG00000000977) #36	COPE (ENSBGRG00000001045) #37
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000159994.a.a #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705.q.b #25	ENSGT00530000064192.s #26	ENSGT00940000153593.c.b ##27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Hybrid Bos Indicus	MODERN SPECIES	26	ARRDC2 (ENSBIXG00005001918) #8	IL12RB1 (ENSBIXG00005014340) #9	MAST3 (ENSBIXG00005001845) #10	PIK3R2 (ENSBIXG00005013908) #11	IFI30 (ENSBIXG00005013854) #12	MPV17L2 (ENSBIXG00005013844) #13	RAB3A (ENSBIXG00005013822) #14	PDE4C (ENSBIXG00005007314) #15	ENSBIXG00005013722	JUND (ENSBIXG00005013693) #17	LSM4 (ENSBIXG00005013676) #18	PGPEP1 (ENSBIXG00005001660) #19	ENSBIXG00005013553	GDF15 (ENSBIXG00005005488) #21	LRRC25 (ENSBIXG00005013526) #20	SSBP4 (ENSBIXG00005001619) #22	ISYNA1 (ENSBIXG00005007444) #23	ELL (ENSBIXG00005006340) #24	FKBP8 (ENSBIXG00005001526) #25	ENSBIXG00005013215 #26	REX1BD (ENSBIXG00005013181) #28	CRLF1 (ENSBIXG00005001505) #29	TMEM59L (ENSBIXG00005013127) #30	KLHL26 (ENSBIXG00005001500) #31	CRTC1 (ENSBIXG00005013032) #32	COMP (ENSBIXG00005012859) #33	UPF1 (ENSBIXG00005012808) #34	COPE (ENSBIXG00005012672) #37	DDX49 (ENSBIXG00005012358)	HOMER3 (ENSBIXG00005000373)	SUGP2 (ENSBIXG00005001278)
Cow	MODERN SPECIES	26	MAST3 (ENSBTAG00000002347) #10	PIK3R2 (ENSBTAG00000002350) #11	IFI30 (ENSBTAG00000018349) #12	MPV17L2 (ENSBTAG00000025788) #13	RAB3A (ENSBTAG00000010635) #14	PDE4C (ENSBTAG00000010652) #15	CIST1 (ENSBTAG00000033886)	ENSBTAG00000054700 #16	JUND (ENSBTAG00000052791) #17	LSM4 (ENSBTAG00000008578) #18	ENSBTAG00000053097	ENSBTAG00000053022	PGPEP1 (ENSBTAG00000002566) #19	GDF15 (ENSBTAG00000015618) #21	LRRC25 (ENSBTAG00000017273) #20	SSBP4 (ENSBTAG00000003947) #22	ISYNA1 (ENSBTAG00000017482) #23	ELL (ENSBTAG00000003587) #24	FKBP8 (ENSBTAG00000016264) #25	KXD1 (ENSBTAG00000010545) #26	UBA52 (ENSBTAG00000007737) ##27	REX1BD (ENSBTAG00000007739) #28	CRLF1 (ENSBTAG00000007741) #29	TMEM59L (ENSBTAG00000007698) #30	KLHL26 (ENSBTAG00000014114) #31	CRTC1 (ENSBTAG00000010379) #32	COMP (ENSBTAG00000004630) #33	UPF1 (ENSBTAG00000020922) #34	GDF1 (ENSBTAG00000020923) #35	CERS1 (ENSBTAG00000037729) #36	COPE (ENSBTAG00000000810) #37
Siberian musk deer	MODERN SPECIES	1231	ARRDC2 (ENSMMSG00000020714) #8	IL12RB1 (ENSMMSG00000020813) #9	MAST3 (ENSMMSG00000020929) #10	PIK3R2 (ENSMMSG00000021193) #11	IFI30 (ENSMMSG00000021246) #12	MPV17L2 (ENSMMSG00000021294) #13	RAB3A (ENSMMSG00000021318) #14	PDE4C (ENSMMSG00000021382) #15	ENSMMSG00000021641	ENSMMSG00000021650 #16	JUND (ENSMMSG00000021662) #17	LSM4 (ENSMMSG00000021677) #18	PGPEP1 (ENSMMSG00000021709) #19	GDF15 (ENSMMSG00000021745) #21	LRRC25 (ENSMMSG00000021754) #20	SSBP4 (ENSMMSG00000021774) #22	ISYNA1 (ENSMMSG00000021864) #23	ELL (ENSMMSG00000021935) #24	FKBP8 (ENSMMSG00000021969) #25	KXD1 (ENSMMSG00000021990) #26	ENSMMSG00000022005 ##27	REX1BD (ENSMMSG00000022031) #28	CRLF1 (ENSMMSG00000022062) #29	TMEM59L (ENSMMSG00000022096) #30	KLHL26 (ENSMMSG00000022113) #31	CRTC1 (ENSMMSG00000022161) #32	COMP (ENSMMSG00000022327) #33	UPF1 (ENSMMSG00000022501) #34	GDF1 (ENSMMSG00000022528) #35	CERS1 (ENSMMSG00000022516) #36	COPE (ENSMMSG00000022538) #37
Yarkand deer	MODERN SPECIES	32	KCNN1 (ENSCHYG00000021533) #7	ARRDC2 (ENSCHYG00000021311) #8	IL12RB1 (ENSCHYG00000021152) #9	MAST3 (ENSCHYG00000020312) #10	PIK3R2 (ENSCHYG00000020125) #11	IFI30 (ENSCHYG00000019975) #12	MPV17L2 (ENSCHYG00000019897) #13	RAB3A (ENSCHYG00000019752) #14	PDE4C (ENSCHYG00000019445) #15	ENSCHYG00000019351	JUND (ENSCHYG00000019284) #17	LSM4 (ENSCHYG00000019053) #18	PGPEP1 (ENSCHYG00000018924) #19	GDF15 (ENSCHYG00000018886) #21	LRRC25 (ENSCHYG00000018842) #20	SSBP4 (ENSCHYG00000018441) #22	ISYNA1 (ENSCHYG00000018077) #23	ELL (ENSCHYG00000017915) #24	FKBP8 (ENSCHYG00000017721) #25	KXD1 (ENSCHYG00000017621) #26	UBA52 (ENSCHYG00000017560) #27	REX1BD (ENSCHYG00000017438) #28	CRLF1 (ENSCHYG00000017284) #29	TMEM59L (ENSCHYG00000017122) #30	KLHL26 (ENSCHYG00000017020) #31	CRTC1 (ENSCHYG00000016471) #32	COMP (ENSCHYG00000016040) #33	UPF1 (ENSCHYG00000015773) #34	GDF1 (ENSCHYG00000015658) #35	CERS1 (ENSCHYG00000015529) #36	DDX49 (ENSCHYG00000015448)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Tiger	MODERN SPECIES	281	RPL18A (ENSPTIG00000020020)	SLC5A5 (ENSPTIG00000020180)	CCDC124 (ENSPTIG00000020559)	KCNN1 (ENSPTIG00000020664) #7	ARRDC2 (ENSPTIG00000020844) #8	ENSPTIG00000021064 #9	MAST3 (ENSPTIG00000021248) #10	ENSPTIG00000002114 #11	IFI30 (ENSPTIG00000003466) #12	MPV17L2 (ENSPTIG00000003892) #13	RAB3A (ENSPTIG00000004193) #14	PDE4C (ENSPTIG00000005389) #15	LSM4 (ENSPTIG00000006306) #18	PGPEP1 (ENSPTIG00000006509) #19	LRRC25 (ENSPTIG00000006894) #20	SSBP4 (ENSPTIG00000007035) #22	ISYNA1 (ENSPTIG00000007457) #23	ELL (ENSPTIG00000007637) #24	FKBP8 (ENSPTIG00000008090) #25	KXD1 (ENSPTIG00000008232) #26	UBA52 (ENSPTIG00000008713) #27	ENSPTIG00000008919 #28	CRLF1 (ENSPTIG00000009041) #29	TMEM59L (ENSPTIG00000009187) #30	ENSPTIG00000009230 #31	ENSPTIG00000009351 #31	CRTC1 (ENSPTIG00000009427) #32	ENSPTIG00000010043 #33	UPF1 (ENSPTIG00000010159) #34	GDF1 (ENSPTIG00000010670) #35	CERS1 (ENSPTIG00000010849) #36
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00910000147684	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
leopard	MODERN SPECIES	68	KCNN1 (ENSPPRG00000018067) #7	ARRDC2 (ENSPPRG00000015630) #8	IL12RB1 (ENSPPRG00000013438) #9	MAST3 (ENSPPRG00000009333) #10	ENSPPRG00000017899	PIK3R2 (ENSPPRG00000006838) #11	IFI30 (ENSPPRG00000005435) #12	MPV17L2 (ENSPPRG00000005164) #13	RAB3A (ENSPPRG00000004866) #14	PDE4C (ENSPPRG00000004111) #15	JUND (ENSPPRG00000017555) #17	LSM4 (ENSPPRG00000018264) #18	PGPEP1 (ENSPPRG00000016192) #19	GDF15 (ENSPPRG00000013391) #21	LRRC25 (ENSPPRG00000013320) #20	SSBP4 (ENSPPRG00000012939) #22	ISYNA1 (ENSPPRG00000011081) #23	ELL (ENSPPRG00000009009) #24	ENSPPRG00000008580 #24	FKBP8 (ENSPPRG00000008402) #25	KXD1 (ENSPPRG00000007892) #26	UBA52 (ENSPPRG00000006788) #27	REX1BD (ENSPPRG00000004571) #28	CRLF1 (ENSPPRG00000004235) #29	TMEM59L (ENSPPRG00000003959) #30	KLHL26 (ENSPPRG00000003359) #31	CRTC1 (ENSPPRG00000001977) #32	COMP (ENSPPRG00000000723) #33	UPF1 (ENSPPRG00000023470) #34	GDF1 (ENSPPRG00000024438) #35	CERS1 (ENSPPRG00000021419) #36
lion	MODERN SPECIES	2	KCNN1 (ENSPLOG00000004052) #7	ARRDC2 (ENSPLOG00000004086) #8	IL12RB1 (ENSPLOG00000004107) #9	MAST3 (ENSPLOG00000004132) #10	PIK3R2 (ENSPLOG00000004171) #11	IFI30 (ENSPLOG00000004199) #12	MPV17L2 (ENSPLOG00000000018) #13	RAB3A (ENSPLOG00000000031) #14	PDE4C (ENSPLOG00000000047) #15	ENSPLOG00000000074 #16	JUND (ENSPLOG00000000080) #17	LSM4 (ENSPLOG00000000089) #18	PGPEP1 (ENSPLOG00000000108) #19	GDF15 (ENSPLOG00000000128) #21	LRRC25 (ENSPLOG00000000140) #20	SSBP4 (ENSPLOG00000000155) #22	ISYNA1 (ENSPLOG00000000180) #23	ELL (ENSPLOG00000000208) #24	FKBP8 (ENSPLOG00000000234) #25	KXD1 (ENSPLOG00000000255) #26	UBA52 (ENSPLOG00000000273) #27	REX1BD (ENSPLOG00000000289) #28	ENSPLOG00000000303	CRLF1 (ENSPLOG00000000319) #29	TMEM59L (ENSPLOG00000000339) #30	KLHL26 (ENSPLOG00000000360) #31	CRTC1 (ENSPLOG00000000409) #32	COMP (ENSPLOG00000000492) #33	UPF1 (ENSPLOG00000000562) #34	GDF1 (ENSPLOG00000000580) #35	CERS1 (ENSPLOG00000000599) #36
Cat	MODERN SPECIES	1	ARRDC2 (ENSFCAG00000007521) #8	IL12RB1 (ENSFCAG00000007522) #9	MAST3 (ENSFCAG00000007523) #10	PIK3R2 (ENSFCAG00000026883) #11	IFI30 (ENSFCAG00000031065) #12	MPV17L2 (ENSFCAG00000002478) #13	RAB3A (ENSFCAG00000002479) #14	PDE4C (ENSFCAG00000007525) #15	ENSFCAG00000047561	IQCN (ENSFCAG00000007527) #16	JUND (ENSFCAG00000043242) #17	LSM4 (ENSFCAG00000040580) #18	PGPEP1 (ENSFCAG00000045024) #19	GDF15 (ENSFCAG00000009733) #21	LRRC25 (ENSFCAG00000009734) #20	SSBP4 (ENSFCAG00000009736) #22	ISYNA1 (ENSFCAG00000009738) #23	ELL (ENSFCAG00000009739) #24	FKBP8 (ENSFCAG00000009741) #25	KXD1 (ENSFCAG00000033273) #26	UBA52 (ENSFCAG00000009745) #27	REX1BD (ENSFCAG00000024240) #28	ENSFCAG00000033106	CRLF1 (ENSFCAG00000009747) #29	TMEM59L (ENSFCAG00000009749) #30	KLHL26 (ENSFCAG00000042696) #31	CRTC1 (ENSFCAG00000009752) #32	COMP (ENSFCAG00000009754) #33	UPF1 (ENSFCAG00000009757) #34	CERS1 (ENSFCAG00000023920) #37	DDX49 (ENSFCAG00000009760)
Caniformia	ANCESTRAL SPECIES	4	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Canidae	ANCESTRAL SPECIES		ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478.b #37
Red fox	MODERN SPECIES	5	KCNN1 (ENSVVUG00000010157) #7	ARRDC2 (ENSVVUG00000010141) #8	IL12RB1 (ENSVVUG00000010117) #9	MAST3 (ENSVVUG00000009445) #10	PIK3R2 (ENSVVUG00000008441) #11	IFI30 (ENSVVUG00000008281) #12	MPV17L2 (ENSVVUG00000008270) #13	RAB3A (ENSVVUG00000008188) #14	PDE4C (ENSVVUG00000008178) #15	ENSVVUG00000008151 #16	LSM4 (ENSVVUG00000008136) #18	PGPEP1 (ENSVVUG00000008129) #19	GDF15 (ENSVVUG00000008127) #21	LRRC25 (ENSVVUG00000008124) #20	ENSVVUG00000008114	SSBP4 (ENSVVUG00000008060) #22	ISYNA1 (ENSVVUG00000008037) #23	ELL (ENSVVUG00000008025) #24	FKBP8 (ENSVVUG00000008005) #25	UBA52 (ENSVVUG00000007989) #27	REX1BD (ENSVVUG00000007980) #28	CRLF1 (ENSVVUG00000007976) #29	TMEM59L (ENSVVUG00000007974) #30	KLHL26 (ENSVVUG00000007964) #31	CRTC1 (ENSVVUG00000007833) #32	ENSVVUG00000007818 #33	UPF1 (ENSVVUG00000007797) #34	CERS1 (ENSVVUG00000007783) #36	ENSVVUG00000007777 #37	DDX49 (ENSVVUG00000007767)	HOMER3 (ENSVVUG00000007758)
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00950000183087.A.b.a.a	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478.b #37
Dingo	MODERN SPECIES	112	ARRDC2 (ENSCAFG00020011878) #8	IL12RB1 (ENSCAFG00020011880) #9	MAST3 (ENSCAFG00020011887) #10	PIK3R2 (ENSCAFG00020012042) #11	IFI30 (ENSCAFG00020012054) #12	MPV17L2 (ENSCAFG00020012062) #13	RAB3A (ENSCAFG00020012068) #14	PDE4C (ENSCAFG00020012094) #15	ENSCAFG00020012098 #15	ENSCAFG00020012108 #16	LSM4 (ENSCAFG00020012137) #18	PGPEP1 (ENSCAFG00020012145) #19	ENSCAFG00020012147	GDF15 (ENSCAFG00020012162) #21	LRRC25 (ENSCAFG00020012163) #20	SSBP4 (ENSCAFG00020012164) #22	ISYNA1 (ENSCAFG00020012181) #23	ELL (ENSCAFG00020012204) #24	FKBP8 (ENSCAFG00020012233) #25	KXD1 (ENSCAFG00020012268) #26	ENSCAFG00020012269 ##27	ENSCAFG00020012276	REX1BD (ENSCAFG00020012279) #28	CRLF1 (ENSCAFG00020012282) #29	TMEM59L (ENSCAFG00020012289) #30	KLHL26 (ENSCAFG00020012290) #31	CRTC1 (ENSCAFG00020012293) #32	COMP (ENSCAFG00020012328) #33	UPF1 (ENSCAFG00020012347) #34	GDF1 (ENSCAFG00020012350) #35	CERS1 (ENSCAFG00020012351) #36
Dog	MODERN SPECIES	12	ARRDC2 (ENSCAFG00845024147) #8	IL12RB1 (ENSCAFG00845024036) #9	MAST3 (ENSCAFG00845023635) #10	PIK3R2 (ENSCAFG00845023471) #11	IFI30 (ENSCAFG00845023402) #12	MPV17L2 (ENSCAFG00845023290) #13	RAB3A (ENSCAFG00845023221) #14	PDE4C (ENSCAFG00845022978) #15	ENSCAFG00845022825 #16	JUND (ENSCAFG00845022784) #17	LSM4 (ENSCAFG00845022544) #18	PGPEP1 (ENSCAFG00845022461) #19	ENSCAFG00845022439	GDF15 (ENSCAFG00845022411) #21	LRRC25 (ENSCAFG00845022385) #20	SSBP4 (ENSCAFG00845021896) #22	ISYNA1 (ENSCAFG00845021270) #24	FKBP8 (ENSCAFG00845021109) #25	KXD1 (ENSCAFG00845021012) #26	UBA52 (ENSCAFG00845020932) #27	ENSCAFG00845020838 #28	CRLF1 (ENSCAFG00845020775) #29	KLHL26 (ENSCAFG00845020669) #31	CRTC1 (ENSCAFG00845020362) #32	ENSCAFG00845020236 #30	COMP (ENSCAFG00845020025) #33	UPF1 (ENSCAFG00845019866) #34	GDF1 (ENSCAFG00845019828) #35	CERS1 (ENSCAFG00845019662) #36	COPE (ENSCAFG00845019400) #37	DDX49 (ENSCAFG00845019266)
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395.j #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395.j #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
American mink	MODERN SPECIES	58	KCNN1 (ENSNVIG00000017325) #7	ARRDC2 (ENSNVIG00000017355) #8	IL12RB1 (ENSNVIG00000017388) #9	MAST3 (ENSNVIG00000017439) #10	PIK3R2 (ENSNVIG00000017496) #11	IFI30 (ENSNVIG00000017558) #12	MPV17L2 (ENSNVIG00000017572) #13	RAB3A (ENSNVIG00000017588) #14	PDE4C (ENSNVIG00000017617) #15	ENSNVIG00000017808 #16	JUND (ENSNVIG00000017813) #17	LSM4 (ENSNVIG00000017819) #18	PGPI (ENSNVIG00000017857) #19	GDF15 (ENSNVIG00000017900) #21	LRRC25 (ENSNVIG00000017909) #20	SSBP4 (ENSNVIG00000017915) #22	ISYNA1 (ENSNVIG00000017993) #23	ELL (ENSNVIG00000018054) #24	FKBP8 (ENSNVIG00000018099) #25	KXD1 (ENSNVIG00000018138) #26	UBA52 (ENSNVIG00000018210) #27	REX1BD (ENSNVIG00000018234) #28	CRLF1 (ENSNVIG00000018244) #29	TMEM59L (ENSNVIG00000018259) #30	KLHL26 (ENSNVIG00000018276) #31	CRTC1 (ENSNVIG00000018294) #32	COMP (ENSNVIG00000018415) #33	UPF1 (ENSNVIG00000019863) #34	GDF1 (ENSNVIG00000019930) #35	CERS1 (ENSNVIG00000019939) #36	COPE (ENSNVIG00000019958) #37
Ferret	MODERN SPECIES	238	ARRDC2 (ENSMPUG00000015754) #8	IL12RB1 (ENSMPUG00000015738) #9	MAST3 (ENSMPUG00000015733) #10	PIK3R2 (ENSMPUG00000015727) #11	IFI30 (ENSMPUG00000015715) #12	MPV17L2 (ENSMPUG00000015712) #13	RAB3A (ENSMPUG00000015711) #14	PDE4C (ENSMPUG00000015593) #15	IQCN (ENSMPUG00000015591) #16	JUND (ENSMPUG00000019664) #17	ENSMPUG00000015590	LSM4 (ENSMPUG00000015589) #18	PGPEP1 (ENSMPUG00000015587) #19	GDF15 (ENSMPUG00000015586) #21	LRRC25 (ENSMPUG00000015584) #20	SSBP4 (ENSMPUG00000015560) #22	ISYNA1 (ENSMPUG00000015543) #23	ELL (ENSMPUG00000015542) #24	FKBP8 (ENSMPUG00000015541) #25	KXD1 (ENSMPUG00000015537) #26	ENSMPUG00000015527 ##27	REX1BD (ENSMPUG00000015526) #28	CRLF1 (ENSMPUG00000015524) #29	TMEM59L (ENSMPUG00000015522) #30	KLHL26 (ENSMPUG00000015521) #31	CRTC1 (ENSMPUG00000015520) #32	COMP (ENSMPUG00000015518) #33	UPF1 (ENSMPUG00000015516) #34	GDF1 (ENSMPUG00000015514) #35	CERS1 (ENSMPUG00000015497) #36	COPE (ENSMPUG00000015486) #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00940000166941	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395.j #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Giant Panda	MODERN SPECIES	14	KCNN1 (ENSAMEG00000010952) #7	ARRDC2 (ENSAMEG00000010986) #8	IL12RB1 (ENSAMEG00000011008) #9	MAST3 (ENSAMEG00000011019) #10	PIK3R2 (ENSAMEG00000011026) #11	IFI30 (ENSAMEG00000011068) #12	ENSAMEG00000011081 #13	RAB3A (ENSAMEG00000011085) #14	PDE4C (ENSAMEG00000011097) #15	ENSAMEG00000025141 #16	JUND (ENSAMEG00000025896) #17	ENSAMEG00000011162	PGPEP1 (ENSAMEG00000027815) #19	GDF15 (ENSAMEG00000011178) #21	LRRC25 (ENSAMEG00000011181) #20	SSBP4 (ENSAMEG00000011185) #22	ISYNA1 (ENSAMEG00000011239) #23	ELL (ENSAMEG00000011276) #24	ENSAMEG00000011325 #25	ENSAMEG00000011348 #26	UBA52 (ENSAMEG00000011356) #27	REX1BD (ENSAMEG00000011371) #28	CRLF1 (ENSAMEG00000011375) #29	TMEM59L (ENSAMEG00000011379) #30	KLHL26 (ENSAMEG00000011385) #31	CRTC1 (ENSAMEG00000011390) #32	COMP (ENSAMEG00000011419) #33	UPF1 (ENSAMEG00000011474) #34	CERS1 (ENSAMEG00000011517) #36	COPE (ENSAMEG00000011524) #37	DDX49 (ENSAMEG00000011566)
Ursus	ANCESTRAL SPECIES	5	ENSGT00390000012482	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395.j #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Polar bear	MODERN SPECIES	255	CCDC124 (ENSUMAG00000009858)	ENSUMAG00000009850 #7	ENSUMAG00000009844 #8	IL12RB1 (ENSUMAG00000009832) #9	MAST3 (ENSUMAG00000009640) #10	PIK3R2 (ENSUMAG00000009514) #11	IFI30 (ENSUMAG00000009491) #12	MPV17L2 (ENSUMAG00000009485) #13	RAB3A (ENSUMAG00000009464) #14	PDE4C (ENSUMAG00000009070) #15	ENSUMAG00000009018 #16	LSM4 (ENSUMAG00000009013) #18	PGPEP1 (ENSUMAG00000009009) #19	GDF15 (ENSUMAG00000009006) #21	LRRC25 (ENSUMAG00000009005) #20	ENSUMAG00000009000 #22	ELL (ENSUMAG00000008994) #24	FKBP8 (ENSUMAG00000008964) #25	KXD1 (ENSUMAG00000008955) #26	UBA52 (ENSUMAG00000008953) #27	ENSUMAG00000008945 #28	ENSUMAG00000008937	CRTC1 (ENSUMAG00000008860) #32	COMP (ENSUMAG00000007436) #33	UPF1 (ENSUMAG00000006652) #34	COPE (ENSUMAG00000006505) #37	DDX49 (ENSUMAG00000006489)	HOMER3 (ENSUMAG00000006477)	SUGP2 (ENSUMAG00000006467)	ARMC6 (ENSUMAG00000006462)	SLC25A42 (ENSUMAG00000006458)
American black bear	MODERN SPECIES	3653																ENSUAMG00000016152 #22	ISYNA1 (ENSUAMG00000016150) #23	ELL (ENSUAMG00000016149) #24	FKBP8 (ENSUAMG00000016145) #25	KXD1 (ENSUAMG00000016142) #26
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Megabat	MODERN SPECIES	485															GDF15 (ENSPVAG00000009921) #21	SSBP4 (ENSPVAG00000009922) #22	ISYNA1 (ENSPVAG00000009923) #23	ELL (ENSPVAG00000009924) #24	FKBP8 (ENSPVAG00000009926) #25	KXD1 (ENSPVAG00000009927) #26	UBA52 (ENSPVAG00000024217) #27	ENSPVAG00000009928 #28	CRLF1 (ENSPVAG00000009929) #29	TMEM59L (ENSPVAG00000009930) #30	KLHL26 (ENSPVAG00000009931) #31
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Microbat	MODERN SPECIES	1248			IL12RB1 (ENSMLUG00000013796) #9	RAB3A (ENSMLUG00000003982) #14	MAST3 (ENSMLUG00000003943) #10	ENSMLUG00000003961 #11	IFI30 (ENSMLUG00000000931) #12	MPV17L2 (ENSMLUG00000024457) #13	PDE4C (ENSMLUG00000003985) #15	ENSMLUG00000003998 #16	LSM4 (ENSMLUG00000004010) #18	PGPEP1 (ENSMLUG00000002092) #19	ENSMLUG00000023172	GDF15 (ENSMLUG00000002100) #21	LRRC25 (ENSMLUG00000002102) #20	SSBP4 (ENSMLUG00000002107) #22	ISYNA1 (ENSMLUG00000002119) #23	ENSMLUG00000002123 #24	ENSMLUG00000023645 #24	FKBP8 (ENSMLUG00000002128) #25	KXD1 (ENSMLUG00000002143) #26	ENSMLUG00000029594 #27	REX1BD (ENSMLUG00000030218) #28	CRLF1 (ENSMLUG00000002437) #29	ENSMLUG00000028871	KLHL26 (ENSMLUG00000003470) #31	CRTC1 (ENSMLUG00000012234) #32	COMP (ENSMLUG00000012249) #33	UPF1 (ENSMLUG00000012122) #34	ENSMLUG00000012140 #35	ENSMLUG00000026905 #36
Greater horseshoe bat	MODERN SPECIES	9	ARRDC2 (ENSRFEG00010018589) #8	IL12RB1 (ENSRFEG00010018741) #9	MAST3 (ENSRFEG00010019088) #10	PIK3R2 (ENSRFEG00010019200) #11	IFI30 (ENSRFEG00010019241) #12	MPV17L2 (ENSRFEG00010019303) #13	RAB3A (ENSRFEG00010019319) #14	PDE4C (ENSRFEG00010019392) #15	ENSRFEG00010019539	ENSRFEG00010019579 #16	JUND (ENSRFEG00010019678) #17	LSM4 (ENSRFEG00010019692) #18	PGPEP1 (ENSRFEG00010019742) #19	GDF15 (ENSRFEG00010019801) #21	LRRC25 (ENSRFEG00010019813) #20	SSBP4 (ENSRFEG00010019891) #22	ISYNA1 (ENSRFEG00010020056) #23	ELL (ENSRFEG00010020153) #24	FKBP8 (ENSRFEG00010020191) #25	KXD1 (ENSRFEG00010020232) #26	ENSRFEG00010020261 #28	CRLF1 (ENSRFEG00010020301) #29	TMEM59L (ENSRFEG00010020368) #30	KLHL26 (ENSRFEG00010020386) #31	CRTC1 (ENSRFEG00010020465) #32	COMP (ENSRFEG00010020665) #33	UPF1 (ENSRFEG00010020838) #34	GDF1 (ENSRFEG00010020888) #35	CERS1 (ENSRFEG00010005439) #36	DDX49 (ENSRFEG00010005585)	HOMER3 (ENSRFEG00010005693)
Equus	ANCESTRAL SPECIES	23	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT01030000234883	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Donkey	MODERN SPECIES		IL12RB1 (ENSEASG00005005987) #9	MAST3 (ENSEASG00005005993) #10	ENSEASG00005006025 #11	IFI30 (ENSEASG00005006219) #12	MPV17L2 (ENSEASG00005006220) #13	RAB3A (ENSEASG00005006221) #14	PDE4C (ENSEASG00005006231) #15	ENSEASG00005028857	ENSEASG00005038750	ENSEASG00005006233 #16	JUND (ENSEASG00005006235) #17	ENSEASG00005030773 #18	PGPEP1 (ENSEASG00005006237) #19	ENSEASG00005032985	LRRC25 (ENSEASG00005006241) #20	SSBP4 (ENSEASG00005006244) #22	ISYNA1 (ENSEASG00005006248) #23	ELL (ENSEASG00005006252) #24	FKBP8 (ENSEASG00005006254) #25	KXD1 (ENSEASG00005031599) #26	UBA52 (ENSEASG00005033556) #27	ENSEASG00005025213 #28	CRLF1 (ENSEASG00005006270) #29	TMEM59L (ENSEASG00005006274) #30	KLHL26 (ENSEASG00005006276) #31	CRTC1 (ENSEASG00005006280) #32	COMP (ENSEASG00005006320) #33	UPF1 (ENSEASG00005006549) #34	GDF1 (ENSEASG00005029430) #35	CERS1 (ENSEASG00005030456) #36	COPE (ENSEASG00005006557) #37
Horse	MODERN SPECIES	13	IL12RB1 (ENSECAG00000021961) #9	MAST3 (ENSECAG00000008102) #10	PIK3R2 (ENSECAG00000009499) #11	IFI30 (ENSECAG00000013896) #12	MPV17L2 (ENSECAG00000020604) #13	RAB3A (ENSECAG00000023115) #14	PDE4C (ENSECAG00000008059) #15	ENSECAG00000032603	ENSECAG00000053894	IQCN (ENSECAG00000010024) #16	LSM4 (ENSECAG00000010141) #18	PGPEP1 (ENSECAG00000011676) #19	GDF15 (ENSECAG00000039579) #21	LRRC25 (ENSECAG00000017682) #20	ISYNA1 (ENSECAG00000019571) #23	SSBP4 (ENSECAG00000017720) #22	ELL (ENSECAG00000000466) #24	FKBP8 (ENSECAG00000012306) #25	KXD1 (ENSECAG00000020539) #26	CRLF1 (ENSECAG00000023854) #29	UBA52 (ENSECAG00000020660) ##27	REX1BD (ENSECAG00000021433) #28	TMEM59L (ENSECAG00000000133) #30	KLHL26 (ENSECAG00000046223) #31	CRTC1 (ENSECAG00000012748) #32	COMP (ENSECAG00000000336) #33	UPF1 (ENSECAG00000010639) #34	GDF1 (ENSECAG00000026851) #35	CERS1 (ENSECAG00000052582) #36	COPE (ENSECAG00000024390) #37	DDX49 (ENSECAG00000012194)
Atlantogenata	ANCESTRAL SPECIES	42	ENSGT00940000159489.f	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT00390000003478 #37	ENSGT00730000111231
Afrotheria	ANCESTRAL SPECIES	45	ENSGT00940000159489.f	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT00390000003478 #37	ENSGT00730000111231
Afrotheria_a	ANCESTRAL SPECIES	44	ENSGT00940000159489.f	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00940000153593.c.a #27	ENSGT00390000011631 #28	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT00390000003478 #37	ENSGT00730000111231	ENSGT00940000158081
Hyrax	MODERN SPECIES	2168																SSBP4 (ENSPCAG00000005605) #22	ENSPCAG00000005769 #23
Elephant	MODERN SPECIES	270	SLC5A5 (ENSLAFG00000032175)	KCNN1 (ENSLAFG00000022005) #7	ARRDC2 (ENSLAFG00000026674) #8	IL12RB1 (ENSLAFG00000003581) #9	MAST3 (ENSLAFG00000026363) #10	PIK3R2 (ENSLAFG00000000711) #11	IFI30 (ENSLAFG00000013615) #12	MPV17L2 (ENSLAFG00000029124) #13	RAB3A (ENSLAFG00000013618) #14	PDE4C (ENSLAFG00000013627) #15	ENSLAFG00000021534 #16	LSM4 (ENSLAFG00000017459) #18	PGPEP1 (ENSLAFG00000029224) #19	ENSLAFG00000028458 #21	ENSLAFG00000025978 #20	SSBP4 (ENSLAFG00000029510) #22	ISYNA1 (ENSLAFG00000004178) #23	ELL (ENSLAFG00000028366) #24	FKBP8 (ENSLAFG00000008984) #25	UBA52 (ENSLAFG00000008353) #27	REX1BD (ENSLAFG00000008356) #28	TMEM59L (ENSLAFG00000015467) #30	KLHL26 (ENSLAFG00000003041) #31	CRTC1 (ENSLAFG00000003043) #32	COMP (ENSLAFG00000010855) #33	UPF1 (ENSLAFG00000014963) #34	GDF1 (ENSLAFG00000027424) #35	COPE (ENSLAFG00000002932) #37	DDX49 (ENSLAFG00000002934)	HOMER3 (ENSLAFG00000002936)	CRLF1 (ENSLAFG00000008358) #29
Tenrec	MODERN SPECIES	2658																ENSETEG00000006455 #22	ISYNA1 (ENSETEG00000006458) #23
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00390000012482	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00390000012482.b	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Diprotodontia	ANCESTRAL SPECIES	54	ENSGT00390000012482.b	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.b ##27	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36
Diprotodontia_a	ANCESTRAL SPECIES	53	ENSGT00390000012482.b	ENSGT00950000182904.a.b.b #7	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000156018.A #16	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32	ENSGT00940000162169 #33	ENSGT00940000157413 #34	ENSGT00940000162926 #35	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
koala	MODERN SPECIES	133	ENSPCIG00000031020	KCNN1 (ENSPCIG00000027183) #7	ARRDC2 (ENSPCIG00000027188) #8	ENSPCIG00000027201 #9	MAST3 (ENSPCIG00000027217) #10	PIK3R2 (ENSPCIG00000027485) #11	ENSPCIG00000031540 #12	MPV17L2 (ENSPCIG00000012258) #13	RAB3A (ENSPCIG00000012260) #14	PDE4C (ENSPCIG00000012289) #15	ENSPCIG00000018287 #16	JUND (ENSPCIG00000018288) #17	LSM4 (ENSPCIG00000037130) #18	PGPEP1 (ENSPCIG00000031873) #19	ENSPCIG00000003528 #21	SSBP4 (ENSPCIG00000018292) #22	ISYNA1 (ENSPCIG00000018294) #23	ELL (ENSPCIG00000018295) #24	FKBP8 (ENSPCIG00000016149) #25	KXD1 (ENSPCIG00000016150) #26	ENSPCIG00000016153	CRLF1 (ENSPCIG00000016157) #29	ENSPCIG00000031076 #30	KLHL26 (ENSPCIG00000012947) #31	CRTC1 (ENSPCIG00000023392) #32	COMP (ENSPCIG00000006229) #33	UPF1 (ENSPCIG00000006156) #34	ENSPCIG00000006155 #35	CERS1 (ENSPCIG00000006153) #36	COPE (ENSPCIG00000001137) #37	DDX49 (ENSPCIG00000001050)
Common wonbat	MODERN SPECIES	626	SLC5A5 (ENSVURG00010014802)	CCDC124 (ENSVURG00010014813)	KCNN1 (ENSVURG00010014819) #7	ARRDC2 (ENSVURG00010014827) #8	ENSVURG00010014856 #9	MAST3 (ENSVURG00010014870) #10	PIK3R2 (ENSVURG00010014929) #11	ENSVURG00010014942 #13	RAB3A (ENSVURG00010014950) #14	PDE4C (ENSVURG00010014959) #15	ENSVURG00010014977 #16	JUND (ENSVURG00010014985) #17	LSM4 (ENSVURG00010014994) #18	PGPEP1 (ENSVURG00010015000) #19	ENSVURG00010015005 #21	SSBP4 (ENSVURG00010015019) #22	ISYNA1 (ENSVURG00010015054) #23	ELL (ENSVURG00010015067) #24	FKBP8 (ENSVURG00010015095) #25	KXD1 (ENSVURG00010015106) #26	UBA52 (ENSVURG00010015122) #27	ENSVURG00010015181	CRLF1 (ENSVURG00010015189) #29	ENSVURG00010015204 #30	KLHL26 (ENSVURG00010015213) #31	UPF1 (ENSVURG00010015221) #34	ENSVURG00010015230 #35	CERS1 (ENSVURG00010015235) #36	COPE (ENSVURG00010015238) #37	DDX49 (ENSVURG00010015248)	HOMER3 (ENSVURG00010015278)
Wallaby	MODERN SPECIES	3599																SSBP4 (ENSMEUG00000010304) #22	ISYNA1 (ENSMEUG00000010328) #23
Tasmanian devil	MODERN SPECIES		KCNN1 (ENSSHAG00000006692) #7	ARRDC2 (ENSSHAG00000007311) #8	ENSSHAG00000008318 #9	MAST3 (ENSSHAG00000009059) #10	PIK3R2 (ENSSHAG00000009738) #11	ENSSHAG00000022120 #12	MPV17L2 (ENSSHAG00000009989) #13	RAB3A (ENSSHAG00000010227) #14	PDE4C (ENSSHAG00000010359) #15	ENSSHAG00000028095 #16	JUND (ENSSHAG00000021787) #17	LSM4 (ENSSHAG00000021542) #18	PGPEP1 (ENSSHAG00000031355) #19	ENSSHAG00000027753 #21	ENSSHAG00000023181 #21	SSBP4 (ENSSHAG00000002793) #22	ISYNA1 (ENSSHAG00000003750) #23	FKBP8 (ENSSHAG00000006428) #25	KXD1 (ENSSHAG00000006949) #26	UBA52 (ENSSHAG00000021283) #27	ENSSHAG00000007133	CRLF1 (ENSSHAG00000007192) #29	ENSSHAG00000024929 #30	KLHL26 (ENSSHAG00000008083) #31	CRTC1 (ENSSHAG00000009155) #32	COMP (ENSSHAG00000009531) #33	UPF1 (ENSSHAG00000010499) #34	CERS1 (ENSSHAG00000010705) #36	ENSSHAG00000030192 #35	COPE (ENSSHAG00000010821) #37	DDX49 (ENSSHAG00000010982)
Platypus	MODERN SPECIES	84	ARRDC2 (ENSOANG00000013069) #8	ENSOANG00000001288 #9	MAST3 (ENSOANG00000001293) #10	PIK3R2 (ENSOANG00000001300) #11	ENSOANG00000001305 #12	MPV17L2 (ENSOANG00000043847) #13	RAB3A (ENSOANG00000008654) #14	ENSOANG00000049171	ENSOANG00000039923 #17	LSM4 (ENSOANG00000007434) #18	PGPEP1 (ENSOANG00000009849) #19	ENSOANG00000049928 #20	ENSOANG00000046356	ENSOANG00000001923 #21	ENSOANG00000036012 #20	SSBP4 (ENSOANG00000046676) #22	ISYNA1 (ENSOANG00000031278) #23	ELL (ENSOANG00000031962) #24	FKBP8 (ENSOANG00000042600) #25	KXD1 (ENSOANG00000038897) #26	UBA52 (ENSOANG00000005752) #27	ENSOANG00000047121	CRLF1 (ENSOANG00000036818) #29	ENSOANG00000045153 #30	KLHL26 (ENSOANG00000005746) #31	CRTC1 (ENSOANG00000041674) #32	COMP (ENSOANG00000002729) #33	ENSOANG00000004568 #34	ENSOANG00000004569	CERS1 (ENSOANG00000004570) #36	COPE (ENSOANG00000004571) #37
Sauria	ANCESTRAL SPECIES	20	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000174538	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Lepidosauria	ANCESTRAL SPECIES	35	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361	ENSGT00940000156845	ENSGT00390000010974	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00390000004001 #20	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b.d.a #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Episquamata	ANCESTRAL SPECIES	26	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000162442	ENSGT00940000158588	ENSGT00390000006876	ENSGT00940000156845	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00970000194286
Laterata	ANCESTRAL SPECIES	47	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000162442	ENSGT00940000158588	ENSGT00390000006876	ENSGT00940000156845	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851
Common wall lizard	MODERN SPECIES	9	ACER1 (ENSPMRG00000022435)	ENSPMRG00000022439	ANGPTL4 (ENSPMRG00000022446)	ENSPMRG00000022448	MARCHF2 (ENSPMRG00000022454)	ENSPMRG00000022458	ENSPMRG00000022463	TIMM44 (ENSPMRG00000022478)	CTXN1 (ENSPMRG00000022489)	ENSPMRG00000022496	FBN3 (ENSPMRG00000022515)	ENSPMRG00000022527 ##36	ENSPMRG00000022557	GDF15 (ENSPMRG00000022696) #21	ENSPMRG00000022701	SSBP4 (ENSPMRG00000022706) #22	ISYNA1 (ENSPMRG00000022714) #23	ELL (ENSPMRG00000022721) #24	MRPL34 (ENSPMRG00000022728)	DDA1 (ENSPMRG00000022730)	ANO8 (ENSPMRG00000022737)	GTPBP3 (ENSPMRG00000022752)	ENSPMRG00000022755	GNA15 (ENSPMRG00000022760)	GNA11 (ENSPMRG00000022765)	ENSPMRG00000022772	ENSPMRG00000022776	ENSPMRG00000022783	ENSPMRG00000022785	ENSPMRG00000022798	ENSPMRG00000022820
Argentine black and white tegu	MODERN SPECIES	106									ENSSMRG00000022949 ##14	ENSSMRG00000022950	ENSSMRG00000022952 #17	LSM4 (ENSSMRG00000022953) #18	PGPEP1 (ENSSMRG00000022954) #19	ENSSMRG00000022955 #21	ENSSMRG00000022956	SSBP4 (ENSSMRG00000022957) #22	ISYNA1 (ENSSMRG00000022958) #23	ELL (ENSSMRG00000022959) #24	DDA1 (ENSSMRG00000022960)	ANO8 (ENSSMRG00000022961)	GTPBP3 (ENSSMRG00000022962)	UPF1 (ENSSMRG00000022963) #34	ENSSMRG00000022964	CERS1 (ENSSMRG00000022965) #36	COPE (ENSSMRG00000022966) #37	DDX49 (ENSSMRG00000022967)	HOMER3 (ENSSMRG00000022968)	ENSSMRG00000022969	SUGP2 (ENSSMRG00000022970)	ARMC6 (ENSSMRG00000022971)	SLC25A42 (ENSSMRG00000022972)
Toxicofera	ANCESTRAL SPECIES	65					ENSGT00940000158588	ENSGT00390000006876	ENSGT00940000156845	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00970000194286
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000158588	ENSGT00390000006876	ENSGT00940000156845	ENSGT00390000010974	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851	ENSGT00970000194286	ENSGT00940000160580	ENSGT00940000154739.B	ENSGT01050000244924.a.a.b	ENSGT00940000160280	ENSGT00940000162255	ENSGT00390000003821	ENSGT00390000015467	ENSGT00940000160899
Indian cobra	MODERN SPECIES		NDUFA11 (ENSNNAG00000007399)	ENSNNAG00000007413	ENSNNAG00000007423	RANBP3 (ENSNNAG00000007438)	ENSNNAG00000007478	MYO9B (ENSNNAG00000007558)	HAUS8 (ENSNNAG00000008202)	MPV17L2 (ENSNNAG00000008251) #13	RAB3A (ENSNNAG00000008279) #14	ENSNNAG00000008306	ENSNNAG00000008349	JUND (ENSNNAG00000008368) #17	LSM4 (ENSNNAG00000008406) #18	PGPEP1 (ENSNNAG00000008428) #19	ENSNNAG00000008455 #21	SSBP4 (ENSNNAG00000008464) #22	ISYNA1 (ENSNNAG00000008514) #23	ELL (ENSNNAG00000008572) #24	MRPL34 (ENSNNAG00000008616)	DDA1 (ENSNNAG00000008629)	ANO8 (ENSNNAG00000008714)	GTPBP3 (ENSNNAG00000009794)	ENSNNAG00000009812	PALM (ENSNNAG00000009857)	ENSNNAG00000009885	PTBP1 (ENSNNAG00000009999)	PLPPR3 (ENSNNAG00000011915)	CFD (ENSNNAG00000011939)	MED16 (ENSNNAG00000011978)	ENSNNAG00000012118	ARID3A (ENSNNAG00000012160)
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000158588	ENSGT00390000006876	ENSGT00940000156845	ENSGT00390000010974	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851.c	ENSGT00390000016851.d	ENSGT00970000194286	ENSGT00940000160580	ENSGT00940000154739.B	ENSGT01050000244924.a.a.b	ENSGT00940000160280	ENSGT00940000162255	ENSGT00390000003821	ENSGT00390000015467
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000158588	ENSGT00390000006876	ENSGT00940000156845	ENSGT00940000160620.db #13	ENSGT00940000158959.b #14	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00390000012240	ENSGT00390000007029	ENSGT00940000157019	ENSGT00390000016851.c	ENSGT00390000016851.d	ENSGT00970000194286	ENSGT00940000160580	ENSGT00940000154739.B	ENSGT01050000244924.a.a.b	ENSGT00940000160280	ENSGT00940000162255	ENSGT00390000003821	ENSGT00390000015467
Eastern brown snake	MODERN SPECIES	10	SLC1A6 (ENSPTXG00000002096)	NDUFA11 (ENSPTXG00000002099)	VMAC (ENSPTXG00000002102)	ENSPTXG00000002105	RANBP3 (ENSPTXG00000002109)	ENSPTXG00000002113	MYO9B (ENSPTXG00000002118)	MPV17L2 (ENSPTXG00000002123) #13	RAB3A (ENSPTXG00000002125) #14	ENSPTXG00000002128	JUND (ENSPTXG00000002133) #17	LSM4 (ENSPTXG00000002136) #18	PGPEP1 (ENSPTXG00000002138) #19	ENSPTXG00000002142 #21	ENSPTXG00000002144	SSBP4 (ENSPTXG00000002150) #22	ISYNA1 (ENSPTXG00000002158) #23	ELL (ENSPTXG00000002164) #24	MRPL34 (ENSPTXG00000002169)	DDA1 (ENSPTXG00000002172)	ANO8 (ENSPTXG00000002184)	GTPBP3 (ENSPTXG00000002487)	PALM (ENSPTXG00000002489)	ENSPTXG00000002492	PTBP1 (ENSPTXG00000002497)	PLPPR3 (ENSPTXG00000002500)	CFD (ENSPTXG00000002504)	ENSPTXG00000002507	ENSPTXG00000002509	R3HDM4 (ENSPTXG00000002517)	ENSPTXG00000002521
Blue-lipped sea krait	MODERN SPECIES	8242																ENSLLTG00000012046 #22	ISYNA1 (ENSLLTG00000012019) #23
tuatara	MODERN SPECIES	1565	PIK3R2 (ENSSPUG00000009265) #11	MAST3 (ENSSPUG00000009422) #10	ARRDC2 (ENSSPUG00000009652) #8	PEX11G (ENSSPUG00000009674)	ENSSPUG00000009720	INSR (ENSSPUG00000009734)	USE1 (ENSSPUG00000009768)	MYO9B (ENSSPUG00000009847)	HAUS8 (ENSSPUG00000010057)	MPV17L2 (ENSSPUG00000010086) #13	ENSSPUG00000010099 #14	ENSSPUG00000010116	LSM4 (ENSSPUG00000010166) #18	PGPEP1 (ENSSPUG00000010192) #19	ENSSPUG00000010198 #20	SSBP4 (ENSSPUG00000010206) #22	ISYNA1 (ENSSPUG00000010254) #23	ELL (ENSSPUG00000010266) #24	FKBP8 (ENSSPUG00000010283) #25	KXD1 (ENSSPUG00000010296) #26	UBA52 (ENSSPUG00000010306) #27	ENSSPUG00000010329	CRLF1 (ENSSPUG00000010342) #29	TMEM59L (ENSSPUG00000010363) #30	KLHL26 (ENSSPUG00000010387) #31	CRTC1 (ENSSPUG00000010424) #32	UPF1 (ENSSPUG00000010538) #34	ENSSPUG00000010588	CERS1 (ENSSPUG00000010617) #36	COPE (ENSSPUG00000010666) #37	DDX49 (ENSSPUG00000010688)
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Archosauria	ANCESTRAL SPECIES	16	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Aves	ANCESTRAL SPECIES	20	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Neognathae	ANCESTRAL SPECIES	21	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00390000000427	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Passeriformes	ANCESTRAL SPECIES	34	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Passeriformes_d	ANCESTRAL SPECIES	35	ENSGT00940000162053	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Passeriformes_g	ANCESTRAL SPECIES	39	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00940000166941	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Passeroidea	ANCESTRAL SPECIES	38	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000162285 #15	ENSGT00940000162806 #17	ENSGT00940000166941	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	21	MAP2K2 (ENSTGUG00000000994)	ZBTB7A (ENSTGUG00000022308)	PIAS4 (ENSTGUG00000001000)	EEF2 (ENSTGUG00000001004)	DAPK3 (ENSTGUG00000001010)	NMRK2 (ENSTGUG00000001014)	ATCAY (ENSTGUG00000001016)	NRTN (ENSTGUG00000001018)	ENSTGUG00000023469	ENSTGUG00000028884	ENSTGUG00000026529 #14	PDE4C (ENSTGUG00000024006) #15	JUND (ENSTGUG00000023330) #17	ENSTGUG00000001030 #19	ENSTGUG00000022771 #21	ENSTGUG00000022040 #22	ENSTGUG00000001021	MPV17L2 (ENSTGUG00000001023) #13	ENSTGUG00000024891 #14	ENSTGUG00000028110	ENSTGUG00000019522	LSM4 (ENSTGUG00000001027)	ENSTGUG00000028194 #19	ENSTGUG00000025087 #21	ENSTGUG00000022226	ENSTGUG00000026522 #22	ISYNA1 (ENSTGUG00000029076) #23	ELL (ENSTGUG00000001031) #24	FKBP8 (ENSTGUG00000001043) #25	KXD1 (ENSTGUG00000001051) #26	UBA52 (ENSTGUG00000024751) ##27
Zebra finch	MODERN SPECIES	21	ENSTGUG00000026529 #14	PDE4C (ENSTGUG00000024006) #15	JUND (ENSTGUG00000023330) #17	ENSTGUG00000001030 #19	ENSTGUG00000022771 #21	ENSTGUG00000022040 #22	ENSTGUG00000001021	MPV17L2 (ENSTGUG00000001023) #13	ENSTGUG00000024891 #14	ENSTGUG00000028110	ENSTGUG00000019522	LSM4 (ENSTGUG00000001027)	ENSTGUG00000028194 #19	ENSTGUG00000025087 #21	ENSTGUG00000022226	ENSTGUG00000026522 #22	ISYNA1 (ENSTGUG00000029076) #23	ELL (ENSTGUG00000001031) #24	FKBP8 (ENSTGUG00000001043) #25	KXD1 (ENSTGUG00000001051) #26	UBA52 (ENSTGUG00000024751) ##27	ENSTGUG00000028566	CRLF1 (ENSTGUG00000001061) #29	TMEM59L (ENSTGUG00000020934) #30	KLHL26 (ENSTGUG00000001064) #31	CRTC1 (ENSTGUG00000001067) #32	ENSTGUG00000014102	UPF1 (ENSTGUG00000001057) #34	ENSTGUG00000028778	CERS1 (ENSTGUG00000014035) #36	ENSTGUG00000029565 #37
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00940000159994 #8	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.a ##29	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36
Kakapo	MODERN SPECIES	13	INSR (ENSSHBG00005000915)	ARHGEF18 (ENSSHBG00005000899)	ENSSHBG00005019127	ARRDC2 (ENSSHBG00005019120) #8	MAST3 (ENSSHBG00005017671) #10	PIK3R2 (ENSSHBG00005017536) #11	IFI30 (ENSSHBG00005017530) #12	MPV17L2 (ENSSHBG00005017526) #13	RAB3A (ENSSHBG00005017522) #14	ENSSHBG00005017510	JUND (ENSSHBG00005017505) #17	LSM4 (ENSSHBG00005017503) #18	PGPEP1 (ENSSHBG00005017497) #19	ENSSHBG00005017494 #21	ENSSHBG00005017492	SSBP4 (ENSSHBG00005017488) #22	ISYNA1 (ENSSHBG00005017482) #23	ELL (ENSSHBG00005017473) #24	FKBP8 (ENSSHBG00005017464) #25	KXD1 (ENSSHBG00005017459) #26	UBA52 (ENSSHBG00005017457) #27	ENSSHBG00005017455	CRLF1 (ENSSHBG00005017451) #29	TMEM59L (ENSSHBG00005017449) #30	KLHL26 (ENSSHBG00005017448) #31	CRTC1 (ENSSHBG00005017446) #32	ENSSHBG00005017399	UPF1 (ENSSHBG00005017089) #34	ENSSHBG00005017060	CERS1 (ENSSHBG00005017057) #36	COPE (ENSSHBG00005017048) #37
Golden eagle	MODERN SPECIES	3	INSR (ENSACCG00020006932)	ENSACCG00020006918	ARHGEF18 (ENSACCG00020006875)	ENSACCG00020006793	ARRDC2 (ENSACCG00020006771) #8	MAST3 (ENSACCG00020006703) #10	PIK3R2 (ENSACCG00020006658) #11	IFI30 (ENSACCG00020006634) #12	MPV17L2 (ENSACCG00020006616) #13	RAB3A (ENSACCG00020006602) #14	ENSACCG00020006565	JUND (ENSACCG00020006540) #17	LSM4 (ENSACCG00020006528) #18	PGPEP1 (ENSACCG00020006516) #19	ENSACCG00020006502	SSBP4 (ENSACCG00020006329) #22	ISYNA1 (ENSACCG00020006198) #23	ELL (ENSACCG00020006177) #24	FKBP8 (ENSACCG00020006152) #25	KXD1 (ENSACCG00020006135) #26	UBA52 (ENSACCG00020006118) ##27	ENSACCG00020006101	ENSACCG00020006087 ##29	TMEM59L (ENSACCG00020006064) #30	KLHL26 (ENSACCG00020006048) #31	CRTC1 (ENSACCG00020006031) #32	ENSACCG00020005982	UPF1 (ENSACCG00020005946) #34	ENSACCG00020005919	CERS1 (ENSACCG00020005915) #36	COPE (ENSACCG00020005888) #37
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b.f #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b.f #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b.f #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Chicken	MODERN SPECIES	20	INSR (ENSGALG00010027254)	ARHGEF18 (ENSGALG00010027244)	PEX11G (ENSGALG00010027236)	ARRDC2 (ENSGALG00010027232) #8	ENSGALG00010027340 #9	MAST3 (ENSGALG00010027335) #10	PIK3R2 (ENSGALG00010027324) #11	ENSGALG00010027321 #12	MPV17L2 (ENSGALG00010027317) #13	RAB3A (ENSGALG00010027315) #14	ENSGALG00010027314	JUND (ENSGALG00010027307) #17	LSM4 (ENSGALG00010027305) #18	PGPEP1 (ENSGALG00010027299) #19	ENSGALG00010027172 #21	SSBP4 (ENSGALG00010027168) #22	ISYNA1 (ENSGALG00010027156) #23	ELL (ENSGALG00010027148) #24	KXD1 (ENSGALG00010027146) #26	FKBP8 (ENSGALG00010027137) #25	UBA52 (ENSGALG00010027131) #27	ENSGALG00010028465	CRLF1 (ENSGALG00010028460) #29	TMEM59L (ENSGALG00010028451) #30	KLHL26 (ENSGALG00010028191) #31	CRTC1 (ENSGALG00010028183) #32	COMP (ENSGALG00010028177)	UPF1 (ENSGALG00010028176) #34	GDF3 (ENSGALG00010028173)	CERS1 (ENSGALG00010028172) #36	COPE (ENSGALG00010028170) #37
Japanese quail	MODERN SPECIES	20	ARHGEF18 (ENSCJPG00005011932)	ENSCJPG00005011931	ENSCJPG00005011930	ARRDC2 (ENSCJPG00005011929) #8	ENSCJPG00005011928	MAST3 (ENSCJPG00005011912) #10	PIK3R2 (ENSCJPG00005011909) #11	IFI30 (ENSCJPG00005011906) #12	MPV17L2 (ENSCJPG00005011905) #13	RAB3A (ENSCJPG00005011904) #14	JUND (ENSCJPG00005011902) #17	LSM4 (ENSCJPG00005011900) #18	PGPEP1 (ENSCJPG00005011899) #19	ENSCJPG00005011898 #21	ISYNA1 (ENSCJPG00005011896) #23	SSBP4 (ENSCJPG00005011692) #22	ELL (ENSCJPG00005011687) #24	KXD1 (ENSCJPG00005011685) #26	UBA52 (ENSCJPG00005011684) #27	FKBP8 (ENSCJPG00005011613) #25	ENSCJPG00005011611	CRLF1 (ENSCJPG00005011610) #29	ENSCJPG00005011609	KLHL26 (ENSCJPG00005011608) #31	CRTC1 (ENSCJPG00005011543) #32	ENSCJPG00005011352	UPF1 (ENSCJPG00005011267) #34	ENSCJPG00005011266	CERS1 (ENSCJPG00005011264) #36	COPE (ENSCJPG00005011259) #37	DDX49 (ENSCJPG00005011191)
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT01030000238185	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994 #8	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000155674	ENSGT01030000234840	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
Goode s thornscrub tortoise	MODERN SPECIES	14	PEX11G (ENSGEVG00005018620)	ARRDC2 (ENSGEVG00005018645) #8	ENSGEVG00005018680	MAST3 (ENSGEVG00005018711) #10	PIK3R2 (ENSGEVG00005018788) #11	IFI30 (ENSGEVG00005018820) #12	MPV17L2 (ENSGEVG00005018840) #13	ENSGEVG00005018855	RAB3A (ENSGEVG00005018864) #14	ENSGEVG00005018960	JUND (ENSGEVG00005019215) #17	LSM4 (ENSGEVG00005019224) #18	PGPEP1 (ENSGEVG00005019233) #19	ENSGEVG00005019242 #21	ENSGEVG00005019252	SSBP4 (ENSGEVG00005019269) #22	ISYNA1 (ENSGEVG00005019284) #23	ELL (ENSGEVG00005019294) #24	ENSGEVG00005019301	FKBP8 (ENSGEVG00005019307) #25	KXD1 (ENSGEVG00005019317) #26	UBA52 (ENSGEVG00005019323) #27	ENSGEVG00005019334	CRLF1 (ENSGEVG00005019342) #29	TMEM59L (ENSGEVG00005019360) #30	KLHL26 (ENSGEVG00005019386) #31	CRTC1 (ENSGEVG00005019397) #32	THBS4 (ENSGEVG00005019413)	UPF1 (ENSGEVG00005019427) #34	ENSGEVG00005004318	CERS1 (ENSGEVG00005004366) #36
Abingdon island giant tortoise	MODERN SPECIES	897	ENSCABG00000016419	PEX11G (ENSCABG00000016417)	TEX45 (ENSCABG00000016416)	ARRDC2 (ENSCABG00000016415) #8	MAST3 (ENSCABG00000016409) #10	PIK3R2 (ENSCABG00000016368) #11	IFI30 (ENSCABG00000016346) #12	MPV17L2 (ENSCABG00000016336) #13	RAB3A (ENSCABG00000016331) #14	ENSCABG00000016323	ENSCABG00000016321	LSM4 (ENSCABG00000016318) #18	PGPEP1 (ENSCABG00000016317) #19	ENSCABG00000016315 #21	ENSCABG00000016313	SSBP4 (ENSCABG00000016310) #22	ISYNA1 (ENSCABG00000016309) #23	ELL (ENSCABG00000016281) #24	FKBP8 (ENSCABG00000016277) #25	KXD1 (ENSCABG00000016274) #26	UBA52 (ENSCABG00000016273) #27	ENSCABG00000016271	CRLF1 (ENSCABG00000016270) #29	TMEM59L (ENSCABG00000016267) #30	KLHL26 (ENSCABG00000016263) #31	CRTC1 (ENSCABG00000016260) #32	ENSCABG00000016259	UPF1 (ENSCABG00000016111) #34	ENSCABG00000016109	CERS1 (ENSCABG00000016108) #36	COPE (ENSCABG00000016084) #37
Emydidae	ANCESTRAL SPECIES	14	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994 #8	ENSGT00390000012431 #9	ENSGT00940000157166 #10	ENSGT00940000157050 #11	ENSGT00390000010450 #12	ENSGT00940000160620 #13	ENSGT00940000158959.b #14	ENSGT00940000164492	ENSGT00940000162806 #17	ENSGT00610000086173 #18	ENSGT00390000015368.a.a #19	ENSGT00940000161872 #21	ENSGT00950000185433	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593.c.a #27	ENSGT00940000166035	ENSGT00940000156569.a.b #29	ENSGT00390000008279.b #30	ENSGT00940000159238.b #31	ENSGT00390000010652.D.b #32	ENSGT00940000155227	ENSGT00940000157413 #34	ENSGT00940000164416	ENSGT01030000234515.b #36	ENSGT00390000003478 #37
painted turtle	MODERN SPECIES	771	ENSCPBG00000012961	ARRDC2 (ENSCPBG00000012959) #8	ENSCPBG00000012956 #9	MAST3 (ENSCPBG00000012946) #10	PIK3R2 (ENSCPBG00000012939) #11	IFI30 (ENSCPBG00000012937) #12	MPV17L2 (ENSCPBG00000012933) #13	RAB3A (ENSCPBG00000012930) #14	ENSCPBG00000012929	ENSCPBG00000012928	ENSCPBG00000012926	LSM4 (ENSCPBG00000012925) #18	PGPEP1 (ENSCPBG00000012924) #19	ENSCPBG00000012922 #21	ENSCPBG00000012920	SSBP4 (ENSCPBG00000012919) #22	ISYNA1 (ENSCPBG00000012918) #23	ELL (ENSCPBG00000012916) #24	FKBP8 (ENSCPBG00000012915) #25	KXD1 (ENSCPBG00000012914) #26	UBA52 (ENSCPBG00000012913) #27	ENSCPBG00000012912	CRLF1 (ENSCPBG00000012911) #29	TMEM59L (ENSCPBG00000012910) #30	KLHL26 (ENSCPBG00000012909) #31	CRTC1 (ENSCPBG00000012907) #32	THBS4 (ENSCPBG00000012536)	UPF1 (ENSCPBG00000012513) #34	ENSCPBG00000012510	CERS1 (ENSCPBG00000012508) #36	COPE (ENSCPBG00000012504) #37
Three-toed box turtle	MODERN SPECIES	2067																ENSTMTG00000020220 #22
Chinese turtle	MODERN SPECIES	1790														LSM4 (ENSPSIG00000012358) #18	PGPEP1 (ENSPSIG00000012192) #19	SSBP4 (ENSPSIG00000012047) #22	ELL (ENSPSIG00000011611) #24	FKBP8 (ENSPSIG00000011511) #25	KXD1 (ENSPSIG00000011318) #26	UBA52 (ENSPSIG00000011198) #27	CRLF1 (ENSPSIG00000011140) #29	TMEM59L (ENSPSIG00000010763) #30	KLHL26 (ENSPSIG00000010574) #31	CRTC1 (ENSPSIG00000010543) #32	ENSPSIG00000009643	UPF1 (ENSPSIG00000009491) #34	ENSPSIG00000009471	CERS1 (ENSPSIG00000009415) #36	COPE (ENSPSIG00000009381) #37	DDX49 (ENSPSIG00000008625)	HOMER3 (ENSPSIG00000008524)
Anura	ANCESTRAL SPECIES	247														ENSGT00950000185433	ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00530000064192 #26	ENSGT00940000153593 #27	ENSGT00940000166035	ENSGT00390000008279.b #30	ENSGT00940000159238 #31	ENSGT00390000010652.D.b #32
Frog	MODERN SPECIES		ENSXETG00000039944	cdc34 (ENSXETG00000006555)	bsg (ENSXETG00000006553)	hcn2 (ENSXETG00000031566)	polrmt (ENSXETG00000006545)	fgf22 (ENSXETG00000034157)	rnf126 (ENSXETG00000006543)	ENSXETG00000041709	fstl3 (ENSXETG00000022970)	prtn3-like.2 (ENSXETG00000038551)	gdf15 (ENSXETG00000045808) #21	ENSXETG00000035130	chchd10 (ENSXETG00000022956)	ENSXETG00000043688	ENSXETG00000022948	ssbp4 (ENSXETG00000022940) #22	isyna1 (ENSXETG00000022938) #23	ell (ENSXETG00000023213) #24	fkbp8 (ENSXETG00000023205) #25	ENSXETG00000044111	kxd1 (ENSXETG00000023203) #26	uba52 (ENSXETG00000023202) #27	rex1bd (ENSXETG00000023201)	ENSXETG00000048394	crlf1 (ENSXETG00000023198) ##29	tmem59l (ENSXETG00000011196) #30	klhl26 (ENSXETG00000030062) #31	crtc1 (ENSXETG00000011199) #32	comp (ENSXETG00000011202)	ENSXETG00000039753	parp14.3 (ENSXETG00000045410)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000006940	ARRDC2 (ENSLLEG00000006857) #8	ENSLLEG00000006832	PEX11G (ENSLLEG00000006782)	ENSLLEG00000006742	ENSLLEG00000006705	ENSLLEG00000006675	ENSLLEG00000006656	ENSLLEG00000006624	ENSLLEG00000006603	ARHGEF18 (ENSLLEG00000006272)	ENSLLEG00000006216	ENSLLEG00000006144	ENSLLEG00000006095	ENSLLEG00000006080	SSBP4 (ENSLLEG00000006006) #22	ISYNA1 (ENSLLEG00000005823) #23	ELL (ENSLLEG00000005713) #24	FKBP8 (ENSLLEG00000005660) #25	KXD1 (ENSLLEG00000005623) #26	ENSLLEG00000005605	UBA52 (ENSLLEG00000005502) #27	ENSLLEG00000005392	CRLF1 (ENSLLEG00000005259) ##29	ENSLLEG00000005237	ENSLLEG00000005228	TMEM59L (ENSLLEG00000005210) #30	KLHL26 (ENSLLEG00000005148) #31	ENSLLEG00000003725	ENSLLEG00000003715	CRTC1 (ENSLLEG00000003671) #32
Coelacanth	MODERN SPECIES	376				ENSLACG00000001508	ENSLACG00000003190	ENSLACG00000005469	KIRREL1 (ENSLACG00000008193)	MPV17L2 (ENSLACG00000013371) #13	ENSLACG00000013673	JUND (ENSLACG00000015563) #17	LSM4 (ENSLACG00000015861) #18	PGPEP1 (ENSLACG00000015920) #19	ENSLACG00000016202 #21	ENSLACG00000016331	keap1a (ENSLACG00000016466)	SSBP4 (ENSLACG00000017389) #22	ENSLACG00000017504	ENSLACG00000017582 #23
Actinopterygii	ANCESTRAL SPECIES	242						ENSGT01100000263521.a.b.a.b	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480	ENSGT00940000160988	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.b ##29	ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000012355.A.b	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00390000008279.b #30	ENSGT00940000156569.a.b #29
Reedfish	MODERN SPECIES	3	ENSECRG00000015984	gna15.4 (ENSECRG00000015176)	C2CD4C (ENSECRG00000015075)	cdc34a (ENSECRG00000014989)	ENSECRG00000014959	ENSECRG00000014936	shc2 (ENSECRG00000014647)	cks2 (ENSECRG00000014512)	odf3l2a (ENSECRG00000014440)	ENSECRG00000020868	ENSECRG00000020849	rex1bd (ENSECRG00000020832)	crlf1b (ENSECRG00000020819) ##29	tmem59l (ENSECRG00000020800) #30	keap1a (ENSECRG00000020780)	zgc:110158 (ENSECRG00000020734) #22	ENSECRG00000020708	ISYNA1 (ENSECRG00000020688) #23	ell (ENSECRG00000020666) #24	fkbp8 (ENSECRG00000020645) #25	ENSECRG00000020630	ENSECRG00000020627	celf5a (ENSECRG00000020587)	rgmd (ENSECRG00000020572)	hsd11b1la (ENSECRG00000020559)	micos13 (ENSECRG00000020544)	ENSECRG00000020526	ENSECRG00000020504	ENSECRG00000020491	ENSECRG00000020481	ENSECRG00000020469
Neopterygii	ANCESTRAL SPECIES	247															ENSGT00940000165458	ENSGT00950000183049.C #22	ENSGT00390000012355.A.b	ENSGT00390000018395 #23	ENSGT00940000155914 #24	ENSGT00940000156705 #25	ENSGT00390000008279.b #30	ENSGT00940000156569.a.b #29	ENSGT00940000166035	ENSGT00390000010974	ENSGT00940000162399	ENSGT00940000160480	ENSGT00950000182971.B.a.a	ENSGT00950000182870.a.a.a.a	ENSGT01100000263521.a.b.a.b
Spotted gar	MODERN SPECIES	657	org (ENSLOCG00000005893)	oaz1a (ENSLOCG00000005874)	ENSLOCG00000005854	sf3a2 (ENSLOCG00000005835)	DOT1L (ENSLOCG00000005809)	ENSLOCG00000005794	shc2 (ENSLOCG00000005770)	cks2 (ENSLOCG00000005754)	odf3l2a (ENSLOCG00000005731)	CPAMD8 (ENSLOCG00000005716)	SAC3D1 (ENSLOCG00000005697)	ENSLOCG00000005676	rex1bd (ENSLOCG00000005666)	ENSLOCG00000005642	keap1a (ENSLOCG00000005625)	zgc:110158 (ENSLOCG00000005605) #22	ENSLOCG00000017634	ISYNA1 (ENSLOCG00000005587) #23	ell (ENSLOCG00000005568) #24	fkbp8 (ENSLOCG00000005546) #25	celf5a (ENSLOCG00000005481)	rgmd (ENSLOCG00000005465)	hsd11b1la (ENSLOCG00000005447)	micos13 (ENSLOCG00000005430)	ENSLOCG00000005412	ENSLOCG00000005390	ENSLOCG00000005371	ENSLOCG00000005356	ENSLOCG00000005312	ENSLOCG00000005290	ENSLOCG00000005263
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	131	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00390000018395 #23	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337
Clupeocephala	ANCESTRAL SPECIES	25	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.b	ENSGT00940000166752
Euteleosteomorpha	ANCESTRAL SPECIES	39	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00940000166752	ENSGT00940000155174.f
Protacanthopterygii	ANCESTRAL SPECIES	13	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT00940000159237.a	ENSGT01000000215054	ENSGT00940000159237.b	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	11	ENSGT01030000234519.e.a.a.b.b.a.a.b.b	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT01000000219677	ENSGT00940000156569.a.b.b.f #29	ENSGT00390000008279.b.c #30	ENSGT00950000183049.C.a.a.a #22	ENSGT00940000156705.f #25	ENSGT00940000155914.c.a.b #24	ENSGT00390000013515.g	ENSGT00390000006337	ENSGT00940000159808.e	ENSGT00940000159808.f.a	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b.c	ENSGT00950000183103.d.b.a.b.a	ENSGT00940000166634.e	ENSGT01030000234539.a.a.a.f.a	ENSGT00940000153487.b.a.s.a.c	ENSGT00940000166752.e	ENSGT00940000157036.e.a.d
Salmoninae_a	ANCESTRAL SPECIES	22	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b	ENSGT00940000159004.b.b	ENSGT00940000159237.a.a	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT01000000219677	ENSGT00940000156569.a.b.b.f #29	ENSGT00390000008279.b.c #30	ENSGT00950000183049.C.a.a.a #22	ENSGT00940000156705.f #25	ENSGT00940000155914.c.a.b #24	ENSGT00390000013515.g	ENSGT00390000006337	ENSGT00940000159808.f.a	ENSGT00610000087460	ENSGT00940000159808.e	ENSGT00390000006809	ENSGT00940000164500.b.c	ENSGT00940000164108.b.a.c	ENSGT00950000183103.d.b.a.b.a	ENSGT00940000166634.e	ENSGT01030000234539.a.a.a.f.a	ENSGT00940000153487.b.a.s.a.c	ENSGT00940000166752.e
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b	ENSGT00940000159237.a.a	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT01000000219677	ENSGT00940000156569.a.b.b.f #29	ENSGT00390000008279.b.c #30	ENSGT00950000183049.C.a.a.a #22	ENSGT00940000156705.f #25	ENSGT00940000155914.c.a.b #24	ENSGT00390000013515.g	ENSGT00390000006337	ENSGT00940000159808.e	ENSGT00390000006809	ENSGT00940000164500.b.c	ENSGT00940000164108.b.a.c	ENSGT00950000183103.d.b.a.b.a	ENSGT00940000166634.e	ENSGT01030000234539.a.a.a.f.a	ENSGT00940000153487.b.a.s.a.c	ENSGT00940000166752.e	ENSGT00940000157036.e.a.d	ENSGT00390000018299
Rainbow trout	MODERN SPECIES	26	s1pr3a (ENSOMYG00000029085)	shdb (ENSOMYG00000029068)	ENSOMYG00000029036	ENSOMYG00000053015	ENSOMYG00000057044	ENSOMYG00000048887	shc2 (ENSOMYG00000029021)	cks2 (ENSOMYG00000054974)	odf3l2b (ENSOMYG00000028966)	ENSOMYG00000060165	ENSOMYG00000028933	ENSOMYG00000028867	ENSOMYG00000028843	crlf1b (ENSOMYG00000025390) #29	tmem59l (ENSOMYG00000025330) #30	ssbp4 (ENSOMYG00000028010) #22	fkbp8 (ENSOMYG00000027698) #25	ell (ENSOMYG00000027667) #24	ENSOMYG00000027287	amh (ENSOMYG00000027120)	oaz1a (ENSOMYG00000027112)	org (ENSOMYG00000027097)	lingo3a (ENSOMYG00000027063)	nfil3-4 (ENSOMYG00000027055)	ENSOMYG00000027045	foxq2 (ENSOMYG00000027035)	ENSOMYG00000069495	pias4a (ENSOMYG00000026996)	map2k2a (ENSOMYG00000026830)	ENSOMYG00000026747	tcf3b (ENSOMYG00000026566)
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b	ENSGT01030000234519.e.a.a.b.b.a.a.b.b	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b	ENSGT00940000159237.a.a	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT00940000156569.a.b.b.f #29	ENSGT00390000008279.b.c #30	ENSGT00950000183049.C.a.a.a #22	ENSGT00940000156705.f #25	ENSGT00940000155914.c.a.b #24	ENSGT00390000013515.g	ENSGT00390000006337	ENSGT00940000159808.f.a	ENSGT00940000159808.e	ENSGT00390000006809	ENSGT00940000164500.b.c	ENSGT00940000164108.b.a.c	ENSGT00950000183103.d.b.a.a.b	ENSGT00940000166634.e	ENSGT01030000234539.a.a.a.f.a	ENSGT00940000153487.b.a.s.a.c	ENSGT00940000166752.e	ENSGT00940000157036.e.a.d
Chinook salmon	MODERN SPECIES	29	GPR61 (ENSOTSG00005032922)	ENSOTSG00005032921	elavl4 (ENSOTSG00005032776)	bend5 (ENSOTSG00005032775)	AGBL4 (ENSOTSG00005032773)	spata6 (ENSOTSG00005032767)	ENSOTSG00005032763	gclm (ENSOTSG00005032760)	slc5a9 (ENSOTSG00005032429)	bcar3 (ENSOTSG00005032428)	fnbp1l (ENSOTSG00005032192)	si:ch211-198n5.11 (ENSOTSG00005032130)	RPE65 (ENSOTSG00005031467)	depdc1a (ENSOTSG00005031320)	ENSOTSG00005031319	ssbp4 (ENSOTSG00005031318) #22	fkbp8 (ENSOTSG00005031304) #25	ell (ENSOTSG00005031283) #24	DOT1L (ENSOTSG00005031276)	amh (ENSOTSG00005031275)	oaz1a (ENSOTSG00005031272)	org (ENSOTSG00005031270)	lingo3a (ENSOTSG00005031269)	nfil3-4 (ENSOTSG00005031267)	ENSOTSG00005031265	lrrc40 (ENSOTSG00005031078)	sox2 (ENSOTSG00005031077)	fxr1 (ENSOTSG00005031076)	dnajc19 (ENSOTSG00005031074)	fxr1 (ENSOTSG00005031073)	ttc14 (ENSOTSG00005031072)
Coho salmon	MODERN SPECIES	4	plpp2b (ENSOKIG00005039353)	mier2 (ENSOKIG00005039390)	ENSOKIG00005039559	s1pr3a (ENSOKIG00005039568)	shdb (ENSOKIG00005039582)	ENSOKIG00005039592	ENSOKIG00005039631	shc2 (ENSOKIG00005039647)	ENSOKIG00005039686	cks2 (ENSOKIG00005039691)	CPAMD8 (ENSOKIG00005039733)	ENSOKIG00005039845	crlf1b (ENSOKIG00005039856) #29	tmem59l (ENSOKIG00005039865) #30	ENSOKIG00005039907	ssbp4 (ENSOKIG00005039948) #22	fkbp8 (ENSOKIG00005040657) #25	ell (ENSOKIG00005040869) #24	DOT1L (ENSOKIG00005041013)	amh (ENSOKIG00005041367)	ENSOKIG00005041381	oaz1a (ENSOKIG00005041388)	org (ENSOKIG00005041463)	lingo3a (ENSOKIG00005041488)	nfil3-4 (ENSOKIG00005041496)	ONECUT3 (ENSOKIG00005041534)	foxq2 (ENSOKIG00005041552)	pias4a (ENSOKIG00005041570)	map2k2a (ENSOKIG00005041689)	ENSOKIG00005041909	ENSOKIG00005041921
Salmo	ANCESTRAL SPECIES	14	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d	ENSGT01030000234519.e.a.a.b.b.a.a.b.b	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT00940000156569.a.b.b.f #29	ENSGT00390000008279.b.c #30	ENSGT00950000183049.C.a.a.a #22	ENSGT00940000156705.f #25	ENSGT00940000155914.c.a.b #24	ENSGT00390000013515.g	ENSGT00390000006337	ENSGT00940000159808.e	ENSGT00390000006809	ENSGT00940000164500.b.c	ENSGT00940000164108.b.a.c	ENSGT00950000183103.d.b.a.b.a	ENSGT00940000166634.e	ENSGT01030000234539.a.a.a.f.a	ENSGT00940000153487.b.a.s.a.c	ENSGT00940000166752.e	ENSGT00940000157036.e.a.d	ENSGT00390000018299
Atlantic salmon	MODERN SPECIES	1	lpp2 (ENSSSAG00000063542)	ENSSSAG00000085289	mier2 (ENSSSAG00000114617)	ENSSSAG00000063522	s1pr3a (ENSSSAG00000063516)	shdb (ENSSSAG00000063504)	ENSSSAG00000063472	ENSSSAG00000119779	shc2 (ENSSSAG00000063451)	cks2 (ENSSSAG00000063439)	odf3l2b (ENSSSAG00000101549)	ENSSSAG00000089847	sac3d1 (ENSSSAG00000063395)	crlf1b (ENSSSAG00000085552) #29	tmem59l (ENSSSAG00000094749) #30	ssbp4 (ENSSSAG00000115956) #22	fkbp8 (ENSSSAG00000062933) #25	ell (ENSSSAG00000062878) #24	dot1l (ENSSSAG00000061712)	amh (ENSSSAG00000061537)	oaz1 (ENSSSAG00000061483)	org (ENSSSAG00000061454)	lingo3a (ENSSSAG00000120773)	nfil3-4 (ENSSSAG00000061418)	ENSSSAG00000061384	foxq2 (ENSSSAG00000061378)	pias4a (ENSSSAG00000060551)	map2k2a (ENSSSAG00000102037)	ENSSSAG00000105293	tcf3b (ENSSSAG00000060154)	ENSSSAG00000010231
River trout	MODERN SPECIES	14	ENSSTUG00000032780	plpp2b (ENSSTUG00000032753)	mier2 (ENSSTUG00000032731)	ENSSTUG00000032722	s1pr3a (ENSSTUG00000032718)	shdb (ENSSTUG00000032697)	ENSSTUG00000032692	ENSSTUG00000032685	shc2 (ENSSTUG00000032682)	cks2 (ENSSTUG00000032675)	odf3l2b (ENSSTUG00000032639)	CPAMD8 (ENSSTUG00000032422)	ENSSTUG00000032392	crlf1b (ENSSTUG00000032330) #29	tmem59l (ENSSTUG00000032268) #30	ssbp4 (ENSSTUG00000031717) #22	fkbp8 (ENSSTUG00000031560) #25	ell (ENSSTUG00000031460) #24	DOT1L (ENSSTUG00000031330)	ENSSTUG00000031279	oaz1a (ENSSTUG00000031277)	ENSSTUG00000031273	org (ENSSTUG00000031263)	lingo3a (ENSSTUG00000031260)	ONECUT3 (ENSSTUG00000048688)	foxq2 (ENSSTUG00000048684)	pias4a (ENSSTUG00000048663)	map2k2a (ENSSTUG00000048587)	ENSSTUG00000048578	ENSSTUG00000048574	tcf3b (ENSSTUG00000048478)
Huchen	MODERN SPECIES	64				shdb (ENSHHUG00000042955)	ENSHHUG00000042946	ENSHHUG00000042943	shc2 (ENSHHUG00000042941)	cks2 (ENSHHUG00000042894)	ENSHHUG00000042888	ENSHHUG00000042877	ENSHHUG00000042869	ENSHHUG00000042859	ENSHHUG00000042858	crlf1b (ENSHHUG00000042845) #29	tmem59l (ENSHHUG00000042830) #30	ssbp4 (ENSHHUG00000042772) #22	fkbp8 (ENSHHUG00000042751) #25	ell (ENSHHUG00000042721) #24	DOT1L (ENSHHUG00000042663)	amh (ENSHHUG00000042652)	oaz1a (ENSHHUG00000042642)	ENSHHUG00000042639	org (ENSHHUG00000042630)	lingo3a (ENSHHUG00000042627)	ENSHHUG00000042624	ONECUT3 (ENSHHUG00000042617)	foxq2 (ENSHHUG00000042609)	pias4a (ENSHHUG00000042579)	map2k2a (ENSHHUG00000042167)	ENSHHUG00000042158	tcf3b (ENSHHUG00000042110)
Salmoninae	ANCESTRAL SPECIES	55	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00940000159237.b	ENSGT00950000182870.a.a.a.a.l.b.b	ENSGT00950000182870.a.a.a.a.l.b.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b.e #29	ENSGT00390000008279.b.d #30	ENSGT00950000183049.C.a.a.b #22	ENSGT00940000156705.e #25	ENSGT00940000155914.c.a.a #24	ENSGT00390000013515.h	ENSGT00940000179866	ENSGT00940000159808.f.b	ENSGT00940000164500.b.d	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.b	ENSGT00940000166634.f	ENSGT01030000234539.a.a.a.f.b	ENSGT00940000153487.b.a.s.a.d	ENSGT00940000166752.f	ENSGT00940000157036.e.a.c
Huchen	MODERN SPECIES	472	s1pr3a (ENSHHUG00000051013)	shdb (ENSHHUG00000051006)	ENSHHUG00000051000	ENSHHUG00000050995	ENSHHUG00000050993	shc2 (ENSHHUG00000050992)	shc2 (ENSHHUG00000050987)	cks2 (ENSHHUG00000050973)	odf3l2b (ENSHHUG00000050966)	ENSHHUG00000050959	ENSHHUG00000050950	ENSHHUG00000050945	rex1bd (ENSHHUG00000050941)	crlf1b (ENSHHUG00000050938) #29	tmem59l (ENSHHUG00000050927) #30	ssbp4 (ENSHHUG00000050900) #22	fkbp8 (ENSHHUG00000050895) #25	ell (ENSHHUG00000050889) #24
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00940000159237.b	ENSGT00950000182870.a.a.a.a.l.a	ENSGT00950000182870.a.a.a.a.l.b.b	ENSGT00950000182870.a.a.a.a.l.b.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b.e #29	ENSGT00390000008279.b.d #30	ENSGT00950000183049.C.a.a.b #22	ENSGT00940000156705.e #25	ENSGT00940000155914.c.a.a #24	ENSGT00390000013515.h	ENSGT00940000179866.a	ENSGT00940000159808.f.b	ENSGT01010000226535	ENSGT00940000164500.b.d	ENSGT00940000164108.b.a.d	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.b	ENSGT00940000166634.f	ENSGT01030000234539.a.a.a.f.b	ENSGT00940000153487.b.a.s.a.d	ENSGT00940000166752.f
Salmo	ANCESTRAL SPECIES	20	ENSGT01060000250235.a	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00940000159237.b	ENSGT00950000182870.a.a.a.a.l.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b.e #29	ENSGT00390000008279.b.d #30	ENSGT00950000183049.C.a.a.b #22	ENSGT00940000156705.e #25	ENSGT00940000155914.c.a.a #24	ENSGT00390000013515.h	ENSGT00940000179866.a	ENSGT00940000159808.f.b	ENSGT01010000226535	ENSGT00940000164500.b.d	ENSGT00940000164108.b.a.d	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.b	ENSGT00940000166634.f	ENSGT01030000234539.a.a.a.f.b	ENSGT00940000153487.b.a.s.a.d	ENSGT00940000166752.f
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000074902	ENSSSAG00000119111	mier2 (ENSSSAG00000074906)	s1pr3a (ENSSSAG00000086393)	shdb (ENSSSAG00000074927)	ENSSSAG00000083710	ENSSSAG00000074933	shc2 (ENSSSAG00000074941)	odf3l2b (ENSSSAG00000099149)	ENSSSAG00000084153	rex1bd (ENSSSAG00000008826)	ENSSSAG00000118271	crlf1b (ENSSSAG00000008860) #29	tmem59l (ENSSSAG00000008926) #30	ENSSSAG00000118135	ssbp4 (ENSSSAG00000009016) #22	ENSSSAG00000108322	ell (ENSSSAG00000009143) #24	ENSSSAG00000009382	oaz1s (ENSSSAG00000009700)	ENSSSAG00000009718	ENSSSAG00000009764	lingo3a (ENSSSAG00000110799)	ENSSSAG00000082536	ENSSSAG00000112330	ENSSSAG00000101819	ENSSSAG00000009895	ENSSSAG00000009906	foxq2 (ENSSSAG00000009926)	mp2k2 (ENSSSAG00000009933)	tcf3b (ENSSSAG00000010042)
River trout	MODERN SPECIES	33	plpp2b (ENSSTUG00000004769)	ENSSTUG00000004781	ENSSTUG00000004787	mier2 (ENSSTUG00000004800)	ENSSTUG00000004822	shdb (ENSSTUG00000004834)	ENSSTUG00000004865	shc2 (ENSSTUG00000004877)	cks2 (ENSSTUG00000004900)	odf3l2b (ENSSTUG00000004918)	CPAMD8 (ENSSTUG00000004932)	ENSSTUG00000005086	rex1bd (ENSSTUG00000005100)	crlf1b (ENSSTUG00000005109) #29	tmem59l (ENSSTUG00000005117) #30	ssbp4 (ENSSTUG00000005138) #22	fkbp8 (ENSSTUG00000005192) #25	ell (ENSSTUG00000005235) #24	ENSSTUG00000005243	DOT1L (ENSSTUG00000005256)	ENSSTUG00000005384	oaz1a (ENSSTUG00000005404)	lingo3a (ENSSTUG00000005411)	nfil3-4 (ENSSTUG00000005418)	ENSSTUG00000005431	ENSSTUG00000005496	foxq2 (ENSSTUG00000005501)	pias4a (ENSSTUG00000005509)	map2k2a (ENSSTUG00000005571)	ENSSTUG00000005792	tcf3b (ENSSTUG00000005813)
Oncorhynchus	ANCESTRAL SPECIES	51	ENSGT00940000155885.b.n	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00950000182870.a.a.a.a.l.b.b	ENSGT00950000182870.a.a.a.a.l.b.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b.e #29	ENSGT00390000008279.b.d #30	ENSGT00950000183049.C.a.a.b #22	ENSGT00940000156705.e #25	ENSGT00940000155914.c.a.a #24	ENSGT00390000013515.h	ENSGT00940000159808.f.b	ENSGT01010000226535	ENSGT00940000164500.b.d	ENSGT00940000164108.b.a.d	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.b	ENSGT00940000166634.f	ENSGT01030000234539.a.a.a.f.b	ENSGT00940000153487.b.a.s.a.d	ENSGT00940000166752.f	ENSGT00940000157036.e.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	36	ENSGT00940000155885.b.n	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00950000182870.a.a.a.a.l.b.b	ENSGT00950000182870.a.a.a.a.l.b.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b.e #29	ENSGT00390000008279.b.d #30	ENSGT00950000183049.C.a.a.b #22	ENSGT00940000156705.e #25	ENSGT00940000155914.c.a.a #24	ENSGT00390000013515.h	ENSGT00940000159808.f.b	ENSGT01010000226535	ENSGT00940000164500.b.d	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.b	ENSGT00940000166634.f	ENSGT01030000234539.a.a.a.f.b	ENSGT00940000153487.b.a.s.a.d	ENSGT00940000166752.f	ENSGT00940000157036.e.a.c	ENSGT00950000183005.b.b.d
Coho salmon	MODERN SPECIES	1	ENSOKIG00005022757	gna11a (ENSOKIG00005022598)	ENSOKIG00005022477	ENSOKIG00005022414	plpp2b (ENSOKIG00005022375)	mier2 (ENSOKIG00005022341)	s1pr3a (ENSOKIG00005022331)	shdb (ENSOKIG00005022321)	shc2 (ENSOKIG00005022283)	cks2 (ENSOKIG00005022273)	odf3l2b (ENSOKIG00005022256)	CPAMD8 (ENSOKIG00005022151)	rex1bd (ENSOKIG00005022126)	crlf1b (ENSOKIG00005022067) #29	tmem59l (ENSOKIG00005022039) #30	ssbp4 (ENSOKIG00005022029) #22	fkbp8 (ENSOKIG00005022008) #25	ell (ENSOKIG00005021839) #24	DOT1L (ENSOKIG00005021608)	oaz1a (ENSOKIG00005021515)	ENSOKIG00005021501	lingo3a (ENSOKIG00005021495)	ENSOKIG00005021466	ENSOKIG00005021462	ENSOKIG00005021436	ENSOKIG00005021427	foxq2 (ENSOKIG00005021422)	pias4a (ENSOKIG00005021351)	map2k2a (ENSOKIG00005021116)	ENSOKIG00005021093	tcf3b (ENSOKIG00005020656)
Chinook salmon	MODERN SPECIES		plpp2b (ENSOTSG00005004937)	ENSOTSG00005004934	mier2 (ENSOTSG00005004931)	s1pr3a (ENSOTSG00005004929)	shdb (ENSOTSG00005004927)	ENSOTSG00005004922	ENSOTSG00005004920	shc2 (ENSOTSG00005004919)	cks2 (ENSOTSG00005004917)	odf3l2b (ENSOTSG00005004916)	CPAMD8 (ENSOTSG00005004914)	ENSOTSG00005004911	rex1bd (ENSOTSG00005004908)	crlf1b (ENSOTSG00005004907) #29	tmem59l (ENSOTSG00005004905) #30	ssbp4 (ENSOTSG00005004903) #22	fkbp8 (ENSOTSG00005004892) #25	ell (ENSOTSG00005004889) #24	DOT1L (ENSOTSG00005004614)	oaz1a (ENSOTSG00005004612)	parp8 (ENSOTSG00005004611)	ENSOTSG00005004610	ENSOTSG00005004607	asb12b (ENSOTSG00005004604)	ENSOTSG00005004602	zc4h2 (ENSOTSG00005004595)	ENSOTSG00005004591	ENSOTSG00005004589	FRMPD3 (ENSOTSG00005004588)	prps1b (ENSOTSG00005004571)	SLC25A53 (ENSOTSG00005004570)
Rainbow trout	MODERN SPECIES	22	mier2 (ENSOMYG00000000074)	ENSOMYG00000064720	s1pr3a (ENSOMYG00000025708)	ENSOMYG00000062276	shdb (ENSOMYG00000025662)	ENSOMYG00000025635	ENSOMYG00000025625	shc2 (ENSOMYG00000025608)	ENSOMYG00000050684	cks2 (ENSOMYG00000053448)	odf3l2b (ENSOMYG00000048501)	ENSOMYG00000025498	rex1bd (ENSOMYG00000076969)	crlf1b (ENSOMYG00000025452) #29	tmem59l (ENSOMYG00000028814) #30	ssbp4 (ENSOMYG00000058995) #22	ENSOMYG00000025241	fkbp8 (ENSOMYG00000025167) #25	ell (ENSOMYG00000025107) #24	ENSOMYG00000024612	ENSOMYG00000024438	ENSOMYG00000066284	oaz1a (ENSOMYG00000024421)	ENSOMYG00000064019	lingo3a (ENSOMYG00000024403)	nfil3-4 (ENSOMYG00000024396)	ENSOMYG00000049165	ENSOMYG00000024393	ENSOMYG00000073292	ENSOMYG00000052507	ENSOMYG00000024373
Northern pike	MODERN SPECIES	7	ENSELUG00000017002	plpp2b (ENSELUG00000017042)	ENSELUG00000017276	s1pr3a (ENSELUG00000017325)	shdb (ENSELUG00000017396)	ENSELUG00000000672	shc2 (ENSELUG00000017485)	cks2 (ENSELUG00000017500)	odf3l2b (ENSELUG00000017513)	ENSELUG00000017564	ENSELUG00000017584	rex1bd (ENSELUG00000017613)	crlf1b (ENSELUG00000017624) #29	tmem59l (ENSELUG00000017649) #30	ENSELUG00000027587	ssbp4 (ENSELUG00000017751) #22	fkbp8 (ENSELUG00000017800) #25	ell (ENSELUG00000017856) #24	DOT1L (ENSELUG00000017947)	amh (ENSELUG00000001523)	oaz1a (ENSELUG00000018009)	org (ENSELUG00000018048)	lingo3a (ENSELUG00000031632)	nfil3-4 (ENSELUG00000018073)	ENSELUG00000018163	ONECUT3 (ENSELUG00000018173)	foxq2 (ENSELUG00000000758)	pias4a (ENSELUG00000018209)	map2k2a (ENSELUG00000018291)	ENSELUG00000018331	tcf3b (ENSELUG00000000785)
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT00940000166091	ENSGT00940000156165	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT01030000236343	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Pinecone sodierfish	MODERN SPECIES	18	ENSMMDG00005007277	rgl1 (ENSMMDG00005007172)	colgalt2b (ENSMMDG00005007155)	ENSMMDG00005007151	EDEM3 (ENSMMDG00005006841)	npl (ENSMMDG00005006824)	sec22bb (ENSMMDG00005006821)	ENSMMDG00005006814	ENSMMDG00005006808	ENSMMDG00005006799	slc35a3a (ENSMMDG00005006795)	FAM78B (ENSMMDG00005006793)	rex1bd (ENSMMDG00005006791)	crlf1b (ENSMMDG00005006789) #29	tmem59l (ENSMMDG00005006788) #30	ssbp4 (ENSMMDG00005006752) #22	fkbp8 (ENSMMDG00005006732) #25	ell (ENSMMDG00005006702) #24	DOT1L (ENSMMDG00005005213)	amh (ENSMMDG00005005169)	oaz1a (ENSMMDG00005005165)	org (ENSMMDG00005005160)	lingo3a (ENSMMDG00005005157)	nfil3-4 (ENSMMDG00005005154)	ENSMMDG00005005147	ONECUT3 (ENSMMDG00005005143)	foxq2 (ENSMMDG00005005140)	pias4a (ENSMMDG00005005133)	map2k2a (ENSMMDG00005004987)	ENSMMDG00005004983	tcf3b (ENSMMDG00005004729)
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	469	ENSHCOG00000000907	gpx4b (ENSHCOG00000000909)	PIP5K1C (ENSHCOG00000000914)	ENSHCOG00000000954	marchf2 (ENSHCOG00000000979)	ENSHCOG00000000985	ENSHCOG00000000990	fsd1 (ENSHCOG00000000994)	chaf1a (ENSHCOG00000001004)	ubxn6 (ENSHCOG00000001010)	uap1 (ENSHCOG00000001019)	DDR2 (ENSHCOG00000001029)	hsd17b7 (ENSHCOG00000000044)	serbp1a (ENSHCOG00000001044)	tmem59l (ENSHCOG00000001047) #30	ENSHCOG00000001053 #22	ssbp4 (ENSHCOG00000001058) #22	fkbp8 (ENSHCOG00000001065) #25	ell (ENSHCOG00000001070) #24	DOT1L (ENSHCOG00000001086)	amh (ENSHCOG00000001199)	oaz1a (ENSHCOG00000001278)	org (ENSHCOG00000001285)	lingo3a (ENSHCOG00000001286)	ENSHCOG00000000737	ENSHCOG00000001314	ONECUT3 (ENSHCOG00000001323)	foxq2 (ENSHCOG00000001331)	pias4a (ENSHCOG00000001356)	map2k2a (ENSHCOG00000001372)	ENSHCOG00000001375
Tiger tail seahorse	MODERN SPECIES	469	gpx4b (ENSHCOG00000000909)	PIP5K1C (ENSHCOG00000000914)	ENSHCOG00000000954	marchf2 (ENSHCOG00000000979)	ENSHCOG00000000985	ENSHCOG00000000990	fsd1 (ENSHCOG00000000994)	chaf1a (ENSHCOG00000001004)	ubxn6 (ENSHCOG00000001010)	uap1 (ENSHCOG00000001019)	DDR2 (ENSHCOG00000001029)	hsd17b7 (ENSHCOG00000000044)	serbp1a (ENSHCOG00000001044)	tmem59l (ENSHCOG00000001047) #30	ENSHCOG00000001053 #22	ssbp4 (ENSHCOG00000001058) #22	fkbp8 (ENSHCOG00000001065) #25	ell (ENSHCOG00000001070) #24	DOT1L (ENSHCOG00000001086)	amh (ENSHCOG00000001199)	oaz1a (ENSHCOG00000001278)	org (ENSHCOG00000001285)	lingo3a (ENSHCOG00000001286)	ENSHCOG00000000737	ENSHCOG00000001314	ONECUT3 (ENSHCOG00000001323)	foxq2 (ENSHCOG00000001331)	pias4a (ENSHCOG00000001356)	map2k2a (ENSHCOG00000001372)	ENSHCOG00000001375	tcf3b (ENSHCOG00000001392)
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00960000186850.d	ENSGT00940000164218	ENSGT00940000159858	ENSGT00940000154044.a.a.q.a	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Fugu	MODERN SPECIES	12	ENSTRUG00000017693	ENSTRUG00000026154	GHRHR (ENSTRUG00000017747)	FYCO1 (ENSTRUG00000023562)	colgalt2b (ENSTRUG00000002342)	zgc:92140 (ENSTRUG00000017754)	EDEM3 (ENSTRUG00000017755)	npl (ENSTRUG00000017762)	sec22bb (ENSTRUG00000017768)	notch2 (ENSTRUG00000017773)	slc35a3a (ENSTRUG00000017803)	FAM78B (ENSTRUG00000017806)	rex1bd (ENSTRUG00000024133)	crlf1b (ENSTRUG00000017809) #29	tmem59l (ENSTRUG00000017813) #30	ssbp4 (ENSTRUG00000017822) #22	fkbp8 (ENSTRUG00000017825) #25	ell (ENSTRUG00000017827) #24	DOT1L (ENSTRUG00000017836)	amh (ENSTRUG00000017845)	oaz1 (ENSTRUG00000017848)	org (ENSTRUG00000021694)	lingo3a (ENSTRUG00000029689)	nfil3-4 (ENSTRUG00000024024)	ENSTRUG00000017852	ONECUT3 (ENSTRUG00000017862)	foxq2 (ENSTRUG00000019696)	pias4 (ENSTRUG00000017867)	map2k2a (ENSTRUG00000017876)	ENSTRUG00000017896	tcf3b (ENSTRUG00000017901)
Tetraodon	MODERN SPECIES		ENSTNIG00000006630	ENSTNIG00000006631	ENSTNIG00000006632	GHRHR (ENSTNIG00000006633)	FYCO1 (ENSTNIG00000006634)	colgalt2b (ENSTNIG00000006635)	zgc:92140 (ENSTNIG00000006636)	EDEM3 (ENSTNIG00000006637)	npl (ENSTNIG00000006638)	sec22bb (ENSTNIG00000006639)	notch2 (ENSTNIG00000006640)	slc35a3a (ENSTNIG00000006641)	FAM78B (ENSTNIG00000006642)	crlf1b (ENSTNIG00000019587) #29	tmem59l (ENSTNIG00000019440) #30	ssbp4 (ENSTNIG00000004007) #22	fkbp8 (ENSTNIG00000005610) #25	ell (ENSTNIG00000004352) #24	DOT1L (ENSTNIG00000004351)	ENSTNIG00000000746	oaz1a (ENSTNIG00000005649)	org (ENSTNIG00000005650)	lingo3a (ENSTNIG00000004974)	ENSTNIG00000004975	ENSTNIG00000004976	ENSTNIG00000004331	pias4a (ENSTNIG00000003243)	map2k2a (ENSTNIG00000003242)	ENSTNIG00000004415	tcf3b (ENSTNIG00000004414)	ENSTNIG00000010626
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Ballan wrasse	MODERN SPECIES	45	plin3 (ENSLBEG00000019626)	zgc:77486 (ENSLBEG00000019610)	ABHD17A (ENSLBEG00000019589)	rgl1 (ENSLBEG00000019503)	colgalt2b (ENSLBEG00000019364)	zgc:92140 (ENSLBEG00000019322)	EDEM3 (ENSLBEG00000019214)	npl (ENSLBEG00000019148)	sec22bb (ENSLBEG00000019109)	notch2 (ENSLBEG00000018981)	slc35a3a (ENSLBEG00000018902)	FAM78B (ENSLBEG00000018877)	rex1bd (ENSLBEG00000018861)	crlf1b (ENSLBEG00000018759) #29	tmem59l (ENSLBEG00000018722) #30	ssbp4 (ENSLBEG00000018672) #22	fkbp8 (ENSLBEG00000018640) #25	ell (ENSLBEG00000018604) #24	ENSLBEG00000018587	DOT1L (ENSLBEG00000018459)	amh (ENSLBEG00000018391)	oaz1a (ENSLBEG00000018367)	ENSLBEG00000018346	org (ENSLBEG00000018328)	lingo3a (ENSLBEG00000018319)	nfil3-4 (ENSLBEG00000018305)	ENSLBEG00000018297	ENSLBEG00000018270	ONECUT3 (ENSLBEG00000018257)	foxq2 (ENSLBEG00000018243)	pias4a (ENSLBEG00000018229)
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00940000154737.c.h	ENSGT00940000164939.a.a	ENSGT00940000159170.c	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
European seabass	MODERN SPECIES	17	rorca (ENSDLAG00005009660)	ENSDLAG00005009836	ENSDLAG00005009863	ENSDLAG00005029448	ENSDLAG00005010571	rgl1 (ENSDLAG00005010593)	colgalt2b (ENSDLAG00005010757)	ENSDLAG00005011569	npl (ENSDLAG00005013017)	sec22bb (ENSDLAG00005032207)	notch2 (ENSDLAG00005013216)	ENSDLAG00005034843	rex1bd (ENSDLAG00005018930)	crlf1b (ENSDLAG00005018938) #29	tmem59l (ENSDLAG00005018947) #30	ssbp4 (ENSDLAG00005028129) #22	fkbp8 (ENSDLAG00005006935) #25	ell (ENSDLAG00005006945) #24	ENSDLAG00005007009	ENSDLAG00005007127	oaz1a (ENSDLAG00005007152)	org (ENSDLAG00005032582)	lingo3a (ENSDLAG00005029798)	nfil3-4 (ENSDLAG00005034126)	ENSDLAG00005032586	ENSDLAG00005007203	ENSDLAG00005007246	foxq2 (ENSDLAG00005007454)	pias4a (ENSDLAG00005007467)	map2k2a (ENSDLAG00005007532)	ENSDLAG00005027950
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005007614	rgl1 (ENSLCRG00005005432)	colgalt2b (ENSLCRG00005004879)	ENSLCRG00005004876	EDEM3 (ENSLCRG00005004872)	npl (ENSLCRG00005004860)	sec22bb (ENSLCRG00005004857)	notch2 (ENSLCRG00005003696)	slc35a3a (ENSLCRG00005003682)	rex1bd (ENSLCRG00005003679)	ENSLCRG00005003678	FAM78B (ENSLCRG00005003677)	rex1bd (ENSLCRG00005003675)	crlf1b (ENSLCRG00005003674) #29	tmem59l (ENSLCRG00005003673) #30	ssbp4 (ENSLCRG00005000927) #22	fkbp8 (ENSLCRG00005000803) #25	ell (ENSLCRG00005020613) #24	DOT1L (ENSLCRG00005020600)	amh (ENSLCRG00005020594)	oaz1a (ENSLCRG00005020593)	org (ENSLCRG00005020591)	lingo3a (ENSLCRG00005020590)	nfil3-4 (ENSLCRG00005020589)	ENSLCRG00005020588	ENSLCRG00005020585	ONECUT3 (ENSLCRG00005020583)	foxq2 (ENSLCRG00005020582)	pias4a (ENSLCRG00005020574)	map2k2a (ENSLCRG00005020546)	ENSLCRG00005020543
Gilthead seabream	MODERN SPECIES	2	plin3 (ENSSAUG00010020215)	zgc:77486 (ENSSAUG00010020212)	ENSSAUG00010020209	rgl1 (ENSSAUG00010019330)	colgalt2b (ENSSAUG00010019239)	ENSSAUG00010019220	EDEM3 (ENSSAUG00010019197)	npl (ENSSAUG00010019191)	sec22bb (ENSSAUG00010019187)	notch2 (ENSSAUG00010017240)	slc35a3a (ENSSAUG00010017195)	FAM78B (ENSSAUG00010017191)	rex1bd (ENSSAUG00010017189)	crlf1b (ENSSAUG00010017185) #29	tmem59l (ENSSAUG00010017182) #30	ssbp4 (ENSSAUG00010017171) #22	fkbp8 (ENSSAUG00010017158) #25	ell (ENSSAUG00010016910) #24	DOT1L (ENSSAUG00010016896)	amh (ENSSAUG00010016872)	oaz1a (ENSSAUG00010016869)	org (ENSSAUG00010016866)	lingo3a (ENSSAUG00010016865)	ENSSAUG00010016864	ENSSAUG00010016863	ENSSAUG00010016859	ONECUT3 (ENSSAUG00010016857)	foxq2 (ENSSAUG00010016856)	pias4a (ENSSAUG00010016853)	map2k2a (ENSSAUG00010016794)	ENSSAUG00010016791
Perciformes	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Stickleback	MODERN SPECIES	8	ABHD17A (ENSGACG00000012326)	rgl1 (ENSGACG00000012330)	colgalt2b (ENSGACG00000012364)	ENSGACG00000012389	ENSGACG00000012394	EDEM3 (ENSGACG00000012396)	npl (ENSGACG00000012402)	sec22bb (ENSGACG00000012421)	notch2 (ENSGACG00000012442)	slc35a3a (ENSGACG00000012465)	FAM78B (ENSGACG00000012489)	rex1bd (ENSGACG00000012492)	crlf1b (ENSGACG00000012496) #29	tmem59l (ENSGACG00000012501) #30	ENSGACG00000012506	ssbp4 (ENSGACG00000012509) #22	fkbp8 (ENSGACG00000012561) #25	ell (ENSGACG00000012588) #24	DOT1L (ENSGACG00000012616)	amh (ENSGACG00000012629)	ENSGACG00000012639	oaz1a (ENSGACG00000012643)	ENSGACG00000012649	org (ENSGACG00000012651)	lingo3a (ENSGACG00000012652)	ENSGACG00000012656	ENSGACG00000012658	ONECUT3 (ENSGACG00000012671)	pias4a (ENSGACG00000012681)	map2k2a (ENSGACG00000012686)	ENSGACG00000012730
Lumpfish	MODERN SPECIES	19	SEMA6B (ENSCLMG00005014964)	plin3 (ENSCLMG00005014987)	zgc:77486 (ENSCLMG00005014988)	ABHD17A (ENSCLMG00005014990)	rgl1 (ENSCLMG00005015062)	colgalt2b (ENSCLMG00005015917)	ENSCLMG00005016670	EDEM3 (ENSCLMG00005016673)	npl (ENSCLMG00005016688)	sec22bb (ENSCLMG00005016690)	slc35a3a (ENSCLMG00005016716)	FAM78B (ENSCLMG00005016720)	rex1bd (ENSCLMG00005016724)	crlf1b (ENSCLMG00005016733) #29	tmem59l (ENSCLMG00005016760) #30	ssbp4 (ENSCLMG00005016764) #22	fkbp8 (ENSCLMG00005016767) #25	ell (ENSCLMG00005016774) #24	DOT1L (ENSCLMG00005016800)	amh (ENSCLMG00005016820)	oaz1a (ENSCLMG00005016821)	org (ENSCLMG00005016822)	lingo3a (ENSCLMG00005016825)	ENSCLMG00005016826	ENSCLMG00005016827	ONECUT3 (ENSCLMG00005016830)	foxq2 (ENSCLMG00005016831)	pias4a (ENSCLMG00005016833)	map2k2a (ENSCLMG00005016837)	ENSCLMG00005016924	tcf3b (ENSCLMG00005016927)
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Pike perch	MODERN SPECIES	34	plin3 (ENSSLUG00000008564)	zgc:77486 (ENSSLUG00000008569)	ENSSLUG00000008573	rgl1 (ENSSLUG00000008659)	colgalt2b (ENSSLUG00000009445)	zgc:92140 (ENSSLUG00000009571)	EDEM3 (ENSSLUG00000009587)	npl (ENSSLUG00000009622)	sec22bb (ENSSLUG00000009631)	notch2 (ENSSLUG00000009804)	slc35a3a (ENSSLUG00000012600)	FAM78B (ENSSLUG00000012606)	rex1bd (ENSSLUG00000012607)	crlf1b (ENSSLUG00000012614) #29	tmem59l (ENSSLUG00000012619) #30	ssbp4 (ENSSLUG00000012627) #22	fkbp8 (ENSSLUG00000012664) #25	ell (ENSSLUG00000012675) #24	DOT1L (ENSSLUG00000012762)	amh (ENSSLUG00000012781)	oaz1a (ENSSLUG00000012785)	org (ENSSLUG00000012790)	lingo3a (ENSSLUG00000012793)	ENSSLUG00000012796	ENSSLUG00000012797	ONECUT3 (ENSSLUG00000012802)	foxq2 (ENSSLUG00000012804)	pias4a (ENSSLUG00000012813)	map2k2a (ENSSLUG00000012846)	ENSSLUG00000013000	tcf3b (ENSSLUG00000013013)
Channel bull blenny	MODERN SPECIES	18	ABHD17A (ENSCGOG00000012029)	rgl1 (ENSCGOG00000012001)	colgalt2b (ENSCGOG00000011608)	ENSCGOG00000011592	EDEM3 (ENSCGOG00000010979)	npl (ENSCGOG00000010959)	sec22bb (ENSCGOG00000010939)	notch2 (ENSCGOG00000009799)	slc35a3a (ENSCGOG00000009583)	FAM78B (ENSCGOG00000009578)	rex1bd (ENSCGOG00000009571)	crlf1b (ENSCGOG00000009563) #29	tmem59l (ENSCGOG00000009550) #30	ENSCGOG00000009544	ENSCGOG00000009542	ssbp4 (ENSCGOG00000009536) #22	fkbp8 (ENSCGOG00000009474) #25	ell (ENSCGOG00000009470) #24	DOT1L (ENSCGOG00000008368)	amh (ENSCGOG00000008344)	oaz1a (ENSCGOG00000008337)	ENSCGOG00000008332	org (ENSCGOG00000008327)	lingo3a (ENSCGOG00000008324)	nfil3-4 (ENSCGOG00000008321)	ENSCGOG00000008319	ENSCGOG00000008285	ONECUT3 (ENSCGOG00000008282)	foxq2 (ENSCGOG00000008279)	pias4a (ENSCGOG00000008268)	map2k2a (ENSCGOG00000007606)
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Carangaria	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Seriola	ANCESTRAL SPECIES	21	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Yellowtail amberjack	MODERN SPECIES	2779	plin3 (ENSSLDG00000017634)	zgc:77486 (ENSSLDG00000017667)	ABHD17A (ENSSLDG00000017682)	rgl1 (ENSSLDG00000017709)	colgalt2b (ENSSLDG00000017769)	ENSSLDG00000017800	EDEM3 (ENSSLDG00000017823)	npl (ENSSLDG00000017876)	sec22bb (ENSSLDG00000017903)	notch2 (ENSSLDG00000017971)	slc35a3a (ENSSLDG00000018202)	FAM78B (ENSSLDG00000018217)	rex1bd (ENSSLDG00000018228)	crlf1b (ENSSLDG00000018252) #29	tmem59l (ENSSLDG00000018268) #30	ssbp4 (ENSSLDG00000018284) #22	fkbp8 (ENSSLDG00000018302) #25	ell (ENSSLDG00000018316) #24	DOT1L (ENSSLDG00000018347)	amh (ENSSLDG00000018418)	oaz1a (ENSSLDG00000018586)	org (ENSSLDG00000018605)	lingo3a (ENSSLDG00000018623)	nfil3-4 (ENSSLDG00000018631)	ENSSLDG00000018644	ENSSLDG00000018664	ONECUT3 (ENSSLDG00000018750)	foxq2 (ENSSLDG00000018770)	pias4a (ENSSLDG00000018787)	map2k2a (ENSSLDG00000018873)	ENSSLDG00000018915
Greater amberjack	MODERN SPECIES	111	ENSSDUG00000006340	ABHD17A (ENSSDUG00000006320)	rgl1 (ENSSDUG00000006184)	colgalt2b (ENSSDUG00000006135)	ENSSDUG00000006120	EDEM3 (ENSSDUG00000006051)	npl (ENSSDUG00000006024)	sec22bb (ENSSDUG00000005995)	ENSSDUG00000005967	ENSSDUG00000005929	slc35a3a (ENSSDUG00000005890)	FAM78B (ENSSDUG00000005875)	rex1bd (ENSSDUG00000005861)	crlf1b (ENSSDUG00000005780) #29	tmem59l (ENSSDUG00000005751) #30	ssbp4 (ENSSDUG00000005727) #22	fkbp8 (ENSSDUG00000005713) #25	ell (ENSSDUG00000005638) #24	DOT1L (ENSSDUG00000005561)	amh (ENSSDUG00000005520)	oaz1a (ENSSDUG00000005506)	ENSSDUG00000005495	org (ENSSDUG00000005482)	lingo3a (ENSSDUG00000005473)	nfil3-4 (ENSSDUG00000005467)	ENSSDUG00000005462	ENSSDUG00000005422	ONECUT3 (ENSSDUG00000005407)	foxq2 (ENSSDUG00000005395)	pias4a (ENSSDUG00000005380)	map2k2a (ENSSDUG00000005343)
Barramundi perch	MODERN SPECIES	197	plin3 (ENSLCAG00010025575)	zgc:77486 (ENSLCAG00010025569)	ABHD17A (ENSLCAG00010025554)	rgl1 (ENSLCAG00010025438)	colgalt2b (ENSLCAG00010025374)	ENSLCAG00010025369	EDEM3 (ENSLCAG00010025340)	npl (ENSLCAG00010025322)	sec22bb (ENSLCAG00010025312)	notch2 (ENSLCAG00010025181)	slc35a3a (ENSLCAG00010025117)	FAM78B (ENSLCAG00010025115)	rex1bd (ENSLCAG00010025111)	crlf1b (ENSLCAG00010025106) #29	tmem59l (ENSLCAG00010025097) #30	ssbp4 (ENSLCAG00010025087) #22	fkbp8 (ENSLCAG00010025080) #25	ell (ENSLCAG00010025072) #24	DOT1L (ENSLCAG00010025038)	amh (ENSLCAG00010025009)	oaz1a (ENSLCAG00010025004)	org (ENSLCAG00010024999)	lingo3a (ENSLCAG00010024994)	ENSLCAG00010024993	ENSLCAG00010024989	ENSLCAG00010024982	ENSLCAG00010024970	ONECUT3 (ENSLCAG00010024968)	foxq2 (ENSLCAG00010024965)
Pleuronectoidei	ANCESTRAL SPECIES	29	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Tongue sole	MODERN SPECIES	11	ENSCSEG00000005497	PCSK9 (ENSCSEG00000005502)	ENSCSEG00000005506	si:dkeyp-51f12.2 (ENSCSEG00000005510)	dhcr24 (ENSCSEG00000005523)	ENSCSEG00000005532	slc35d1a (ENSCSEG00000005541)	npl (ENSCSEG00000005548)	sec22bb (ENSCSEG00000005558)	notch2 (ENSCSEG00000005566)	slc35a3a (ENSCSEG00000005577)	FAM78B (ENSCSEG00000005582)	rex1bd (ENSCSEG00000005583)	crlf1b (ENSCSEG00000005591) #29	tmem59l (ENSCSEG00000005608) #30	ssbp4 (ENSCSEG00000005625) #22	fkbp8 (ENSCSEG00000005642) #25	ell (ENSCSEG00000005649) #24	DOT1L (ENSCSEG00000005666)	amh (ENSCSEG00000005692)	oaz1a (ENSCSEG00000005700)	org (ENSCSEG00000005703)	lingo3a (ENSCSEG00000005708)	ENSCSEG00000005713	nfil3-4 (ENSCSEG00000005727)	ENSCSEG00000005733	pias4a (ENSCSEG00000005736)	map2k2a (ENSCSEG00000005743)	ENSCSEG00000005752	tcf3b (ENSCSEG00000005762)	ENSCSEG00000005775
Turbot	MODERN SPECIES	3	plin3 (ENSSMAG00000009950)	ENSSMAG00000026399	ENSSMAG00000009983	rgl1 (ENSSMAG00000010019)	colgalt2b (ENSSMAG00000010074)	ENSSMAG00000010136	ENSSMAG00000010155	npl (ENSSMAG00000022235)	sec22bb (ENSSMAG00000010273)	notch2 (ENSSMAG00000010304)	slc35a3a (ENSSMAG00000010410)	ENSSMAG00000027187	rex1bd (ENSSMAG00000029680)	crlf1b (ENSSMAG00000010468) #29	tmem59l (ENSSMAG00000026832) #30	ssbp4 (ENSSMAG00000010536) #22	fkbp8 (ENSSMAG00000010583) #25	ENSSMAG00000010716	ENSSMAG00000010865	oaz1a (ENSSMAG00000036339)	ENSSMAG00000010955	org (ENSSMAG00000010979)	lingo3a (ENSSMAG00000010996)	nfil3-4 (ENSSMAG00000023493)	ENSSMAG00000011008	ENSSMAG00000011032	foxq2 (ENSSMAG00000027229)	pias4a (ENSSMAG00000011051)	map2k2a (ENSSMAG00000011095)	ENSSMAG00000011133	tcf3b (ENSSMAG00000011141)
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808.g	ENSGT00990000206265	ENSGT00940000159808.h	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Zig-zag eel	MODERN SPECIES	18	ENSMAMG00000000663	ENSMAMG00000000636	rgl1 (ENSMAMG00000000479)	colgalt2b (ENSMAMG00000000439)	ENSMAMG00000000416	ENSMAMG00000000380	ENSMAMG00000000363	npl (ENSMAMG00000000354)	sec22bb (ENSMAMG00000000334)	notch2 (ENSMAMG00000000329)	slc35a3a (ENSMAMG00000000327)	ENSMAMG00000000312	rex1bd (ENSMAMG00000000302)	crlf1b (ENSMAMG00000019897) #29	tmem59l (ENSMAMG00000019855) #30	ssbp4 (ENSMAMG00000019813) #22	fkbp8 (ENSMAMG00000019806) #25	ell (ENSMAMG00000019802) #24	DOT1L (ENSMAMG00000019781)	amh (ENSMAMG00000019772)	oaz1a (ENSMAMG00000019754)	org (ENSMAMG00000019749)	lingo3a (ENSMAMG00000019745)	ENSMAMG00000019742	ENSMAMG00000019708	ENSMAMG00000019702	foxq2 (ENSMAMG00000019697)	pias4a (ENSMAMG00000019688)	map2k2a (ENSMAMG00000019669)	ENSMAMG00000019663	tcf3b (ENSMAMG00000019629)
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808.g	ENSGT00990000206265	ENSGT00940000159808.h	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Siamese fighting fish	MODERN SPECIES	15	SEMA6B (ENSBSLG00000016253)	plin3 (ENSBSLG00000016390)	zgc:77486 (ENSBSLG00000016395)	ABHD17A (ENSBSLG00000016402)	rgl1 (ENSBSLG00000016424)	colgalt2b (ENSBSLG00000016552)	zgc:92140 (ENSBSLG00000018047)	EDEM3 (ENSBSLG00000018083)	npl (ENSBSLG00000019334)	notch2 (ENSBSLG00000019365)	slc35a3a (ENSBSLG00000020072)	FAM78B (ENSBSLG00000020086)	crlf1b (ENSBSLG00000020092) #29	rex1bd (ENSBSLG00000020103)	tmem59l (ENSBSLG00000020107) #30	ssbp4 (ENSBSLG00000020131) #22	fkbp8 (ENSBSLG00000020358) #25	ell (ENSBSLG00000020371) #24	DOT1L (ENSBSLG00000020487)	amh (ENSBSLG00000020545)	oaz1a (ENSBSLG00000000482)	org (ENSBSLG00000000508)	lingo3a (ENSBSLG00000000528)	nfil3-4 (ENSBSLG00000000543)	ENSBSLG00000000554	ENSBSLG00000000564	ONECUT3 (ENSBSLG00000000585)	foxq2 (ENSBSLG00000000594)	pias4a (ENSBSLG00000000614)	map2k2a (ENSBSLG00000000681)	ENSBSLG00000000752
Climbing perch	MODERN SPECIES	17	ENSATEG00000002386	ENSATEG00000002355	rgl1 (ENSATEG00000002267)	colgalt2b (ENSATEG00000002139)	ENSATEG00000002056	ENSATEG00000002047	npl (ENSATEG00000026732)	npl (ENSATEG00000002021)	sec22bb (ENSATEG00000002003)	notch2 (ENSATEG00000001997)	slc35a3a (ENSATEG00000001958)	ENSATEG00000001920	rex1bd (ENSATEG00000001880)	crlf1b (ENSATEG00000001842) #29	tmem59l (ENSATEG00000001639) #30	ssbp4 (ENSATEG00000001551) #22	fkbp8 (ENSATEG00000001536) #25	ell (ENSATEG00000001436) #24	amh (ENSATEG00000025688)	ENSATEG00000000020	ENSATEG00000000602	amh (ENSATEG00000027298)	ENSATEG00000025489	oaz1a (ENSATEG00000029408)	org (ENSATEG00000024225)	lingo3a (ENSATEG00000024223)	ENSATEG00000024219	ENSATEG00000024214	ENSATEG00000024210	foxq2 (ENSATEG00000024209)	pias4a (ENSATEG00000024205)
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT01030000236343	ENSGT00940000179866	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Cichlidae	ANCESTRAL SPECIES	17	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Nile tilapia	MODERN SPECIES	14	ENSONIG00000041936	ENSONIG00000004695	ABHD17A (ENSONIG00000004696)	rgl1 (ENSONIG00000004697)	colgalt2b (ENSONIG00000004707)	ENSONIG00000004713	EDEM3 (ENSONIG00000004714)	npl (ENSONIG00000004720)	sec22bb (ENSONIG00000033947)	notch2 (ENSONIG00000004735)	slc35a3a (ENSONIG00000004749)	FAM78B (ENSONIG00000004750)	rex1bd (ENSONIG00000042787)	crlf1b (ENSONIG00000037935) #29	tmem59l (ENSONIG00000039001) #30	ssbp4 (ENSONIG00000004761) #22	fkbp8 (ENSONIG00000004766) #25	ell (ENSONIG00000004771) #24	amh (ENSONIG00000004781)	DOT1L (ENSONIG00000004774)	ENSONIG00000004783	org (ENSONIG00000004784)	lingo3a (ENSONIG00000021358)	ENSONIG00000021359	ENSONIG00000039980	ENSONIG00000004785	ONECUT3 (ENSONIG00000004792)	foxq2 (ENSONIG00000004794)	pias4a (ENSONIG00000004799)	map2k2a (ENSONIG00000004812)	ENSONIG00000004814
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00950000183049.C.b.b #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Lyretail cichlid	MODERN SPECIES	307	plin3 (ENSNBRG00000009697)	zgc:77486 (ENSNBRG00000009754)	ABHD17A (ENSNBRG00000009762)	rgl1 (ENSNBRG00000009778)	colgalt2b (ENSNBRG00000009871)	zgc:92140 (ENSNBRG00000010106)	EDEM3 (ENSNBRG00000010125)	npl (ENSNBRG00000010182)	sec22bb (ENSNBRG00000010265)	notch2 (ENSNBRG00000010302)	slc35a3a (ENSNBRG00000010431)	FAM78B (ENSNBRG00000010440)	rex1bd (ENSNBRG00000010464)	crlf1b (ENSNBRG00000010481) #29	tmem59l (ENSNBRG00000010502) #30	ssbp4 (ENSNBRG00000010536) #22	ENSNBRG00000010559 #22	fkbp8 (ENSNBRG00000010580) #25	ell (ENSNBRG00000010592) #24	DOT1L (ENSNBRG00000010613)	ENSNBRG00000010673	oaz1a (ENSNBRG00000010696)	ENSNBRG00000010717	org (ENSNBRG00000010726)	ENSNBRG00000010747	ENSNBRG00000010781	ENSNBRG00000010791	ONECUT3 (ENSNBRG00000010842)	foxq2 (ENSNBRG00000010887)	pias4a (ENSNBRG00000010912)	map2k2a (ENSNBRG00000010940)
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00950000183049.C.b.b #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000160540.r	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000160540.r	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
P. nyererei	MODERN SPECIES	318	plin3 (ENSPNYG00000015692)	zgc:77486 (ENSPNYG00000015714)	ABHD17A (ENSPNYG00000015727)	rgl1 (ENSPNYG00000015780)	colgalt2b (ENSPNYG00000015878)	zgc:92140 (ENSPNYG00000016054)	EDEM3 (ENSPNYG00000016068)	npl (ENSPNYG00000016122)	sec22bb (ENSPNYG00000016133)	notch2 (ENSPNYG00000016158)	slc35a3a (ENSPNYG00000016237)	FAM78B (ENSPNYG00000016252)	rex1bd (ENSPNYG00000016277)	crlf1b (ENSPNYG00000016301) #29	tmem59l (ENSPNYG00000016334) #30	ssbp4 (ENSPNYG00000016361) #22	fkbp8 (ENSPNYG00000016388) #25	ell (ENSPNYG00000016397) #24	DOT1L (ENSPNYG00000016428)	amh (ENSPNYG00000016478)	oaz1a (ENSPNYG00000016687)	ENSPNYG00000016713	org (ENSPNYG00000016726)	lingo3a (ENSPNYG00000016742)	ENSPNYG00000016748	ENSPNYG00000016775	ONECUT3 (ENSPNYG00000016953)	foxq2 (ENSPNYG00000016965)	pias4a (ENSPNYG00000016983)	map2k2a (ENSPNYG00000017002)	ENSPNYG00000017042
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000160540.r	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Zebra mbuna	MODERN SPECIES	1105	plin3 (ENSMZEG00005005911)	zgc:77486 (ENSMZEG00005005922)	ENSMZEG00005005934	rgl1 (ENSMZEG00005005968)	tmem59l (ENSMZEG00005006015) #30	crlf1b (ENSMZEG00005006029) #29	rex1bd (ENSMZEG00005006052)	FAM78B (ENSMZEG00005006067)	slc35a3a (ENSMZEG00005006078)	notch2 (ENSMZEG00005006091)	sec22bb (ENSMZEG00005006112)	npl (ENSMZEG00005006132)	EDEM3 (ENSMZEG00005006149)	zgc:92140 (ENSMZEG00005006198)	colgalt2b (ENSMZEG00005006210)	ssbp4 (ENSMZEG00005006255) #22	fkbp8 (ENSMZEG00005006277) #25	ell (ENSMZEG00005006297) #24	DOT1L (ENSMZEG00005006342)	amh (ENSMZEG00005006452)	oaz1a (ENSMZEG00005006485)	ENSMZEG00005006499	org (ENSMZEG00005006509)	lingo3a (ENSMZEG00005006520)	ENSMZEG00005006529	ENSMZEG00005006536	ENSMZEG00005006546	ONECUT3 (ENSMZEG00005006683)	foxq2 (ENSMZEG00005006698)	pias4a (ENSMZEG00005006709)	map2k2a (ENSMZEG00005006735)
Eastern happy	MODERN SPECIES	14	ENSACLG00000022096	ABHD17A (ENSACLG00000022111)	rgl1 (ENSACLG00000022151)	ENSACLG00000022209	colgalt2b (ENSACLG00000022220)	ENSACLG00000022246	EDEM3 (ENSACLG00000022273)	npl (ENSACLG00000022394)	sec22bb (ENSACLG00000022423)	notch2 (ENSACLG00000022454)	slc35a3a (ENSACLG00000022678)	FAM78B (ENSACLG00000022682)	rex1bd (ENSACLG00000022688)	crlf1b (ENSACLG00000022713) #29	tmem59l (ENSACLG00000022737) #30	ssbp4 (ENSACLG00000022748) #22	fkbp8 (ENSACLG00000022797) #25	ell (ENSACLG00000022818) #24	ENSACLG00000022841	DOT1L (ENSACLG00000022850)	ENSACLG00000022926	amh (ENSACLG00000022957)	oaz1a (ENSACLG00000022979)	ENSACLG00000023004	org (ENSACLG00000023013)	lingo3a (ENSACLG00000023021)	ENSACLG00000023025	ENSACLG00000023029	ENSACLG00000023041	ONECUT3 (ENSACLG00000023114)	foxq2 (ENSACLG00000023125)
Burton s mouthbrooder	MODERN SPECIES	414	plin3 (ENSHBUG00000004685)	zgc:77486 (ENSHBUG00000004696)	ABHD17A (ENSHBUG00000004722)	rgl1 (ENSHBUG00000004858)	colgalt2b (ENSHBUG00000004890)	zgc:92140 (ENSHBUG00000004914)	EDEM3 (ENSHBUG00000005014)	npl (ENSHBUG00000005034)	sec22bb (ENSHBUG00000005064)	notch2 (ENSHBUG00000005095)	slc35a3a (ENSHBUG00000005131)	FAM78B (ENSHBUG00000005142)	rex1bd (ENSHBUG00000005149)	crlf1b (ENSHBUG00000005206) #29	tmem59l (ENSHBUG00000005233) #30	ssbp4 (ENSHBUG00000005245) #22	ENSHBUG00000005257 #22	fkbp8 (ENSHBUG00000005368) #25	ell (ENSHBUG00000005404) #24	DOT1L (ENSHBUG00000005459)	amh (ENSHBUG00000005741)	oaz1a (ENSHBUG00000005775)	ENSHBUG00000005785	org (ENSHBUG00000005831)	lingo3a (ENSHBUG00000005836)	ENSHBUG00000005843	ENSHBUG00000005864	ONECUT3 (ENSHBUG00000005882)	foxq2 (ENSHBUG00000005900)	pias4a (ENSHBUG00000005916)	map2k2a (ENSHBUG00000005943)
Midas cichlid	MODERN SPECIES	551	ABHD17A (ENSACIG00000013456)	rgl1 (ENSACIG00000013468)	ENSACIG00000013501	ENSACIG00000013510	colgalt2b (ENSACIG00000013517)	zgc:92140 (ENSACIG00000013547)	EDEM3 (ENSACIG00000013578)	npl (ENSACIG00000013620)	sec22bb (ENSACIG00000013669)	notch2 (ENSACIG00000013692)	slc35a3a (ENSACIG00000013783)	FAM78B (ENSACIG00000014023)	rex1bd (ENSACIG00000014043)	crlf1b (ENSACIG00000014057) #29	tmem59l (ENSACIG00000014082) #30	ssbp4 (ENSACIG00000014107) #22	fkbp8 (ENSACIG00000014150) #25	ell (ENSACIG00000014191) #24	DOT1L (ENSACIG00000014278)	amh (ENSACIG00000014349)	oaz1a (ENSACIG00000014543)	ENSACIG00000014555	org (ENSACIG00000014565)	lingo3a (ENSACIG00000014576)	nfil3-4 (ENSACIG00000014578)	ENSACIG00000014591	ONECUT3 (ENSACIG00000014671)	foxq2 (ENSACIG00000014682)	pias4a (ENSACIG00000014704)	map2k2a (ENSACIG00000014846)	ENSACIG00000014863
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035.d	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035.d	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Amphiprion	ANCESTRAL SPECIES	2	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c.a	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035.d	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Orange clownfish	MODERN SPECIES	11	plin3 (ENSAPEG00000005797)	zgc:77486 (ENSAPEG00000005808)	ABHD17A (ENSAPEG00000005818)	rgl1 (ENSAPEG00000005855)	colgalt2b (ENSAPEG00000005922)	ENSAPEG00000006163	EDEM3 (ENSAPEG00000006216)	npl (ENSAPEG00000006302)	sec22bb (ENSAPEG00000006351)	notch2 (ENSAPEG00000006378)	slc35a3a (ENSAPEG00000006395)	rex1bd (ENSAPEG00000006413)	FAM78B (ENSAPEG00000006433)	crlf1b (ENSAPEG00000006469) #29	tmem59l (ENSAPEG00000006491) #30	ssbp4 (ENSAPEG00000006563) #22	fkbp8 (ENSAPEG00000006577) #25	ell (ENSAPEG00000006602) #24	DOT1L (ENSAPEG00000006653)	amh (ENSAPEG00000006669)	oaz1a (ENSAPEG00000006728)	ENSAPEG00000006750	org (ENSAPEG00000006781)	lingo3a (ENSAPEG00000006790)	nfil3-4 (ENSAPEG00000006796)	ENSAPEG00000006835	ONECUT3 (ENSAPEG00000006901)	foxq2 (ENSAPEG00000006924)	pias4a (ENSAPEG00000006954)	map2k2a (ENSAPEG00000006964)	ENSAPEG00000007009
Spiny chromis	MODERN SPECIES	662														crlf1b (ENSAPOG00000014669) #29	tmem59l (ENSAPOG00000014562) #30	ssbp4 (ENSAPOG00000014523) #22	fkbp8 (ENSAPOG00000014514) #25	ell (ENSAPOG00000014502) #24	amh (ENSAPOG00000014429)	DOT1L (ENSAPOG00000014394)	oaz1a (ENSAPOG00000014367)	ENSAPOG00000014335	org (ENSAPOG00000014326)
Bicolor damselfish	MODERN SPECIES	335					colgalt2b (ENSSPAG00000016843)	zgc:92140 (ENSSPAG00000016827)	EDEM3 (ENSSPAG00000016772)	npl (ENSSPAG00000016757)	sec22bb (ENSSPAG00000016734)	notch2 (ENSSPAG00000016654)	slc35a3a (ENSSPAG00000016635)	FAM78B (ENSSPAG00000016625)	rex1bd (ENSSPAG00000016596)	crlf1b (ENSSPAG00000016572) #29	tmem59l (ENSSPAG00000016543) #30	ssbp4 (ENSSPAG00000016457) #22	fkbp8 (ENSSPAG00000016420) #25	ell (ENSSPAG00000016395) #24	DOT1L (ENSSPAG00000016344)	amh (ENSSPAG00000016324)	oaz1a (ENSSPAG00000016278)	ENSSPAG00000016262	org (ENSSPAG00000016251)	lingo3a (ENSSPAG00000016247)	nfil3-4 (ENSSPAG00000016243)	ENSSPAG00000016013	ENSSPAG00000015973	foxq2 (ENSSPAG00000015959)	pias4a (ENSSPAG00000015929)	map2k2a (ENSSPAG00000015879)	ENSSPAG00000015863
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Oryzias	ANCESTRAL SPECIES	5															ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752	ENSGT00940000157036.e.a
Oryzias_a	ANCESTRAL SPECIES	14	ENSGT00390000016573.c.a	ENSGT00390000016466	ENSGT00940000154595	ENSGT00390000000051.a	ENSGT00940000154412.C.c.b	ENSGT00950000183158.A	ENSGT01030000234515.a.b.b.a ##36	ENSGT00940000163715.b	ENSGT00510000047872	ENSGT00940000159993	ENSGT01030000235960	ENSGT00390000014000	ENSGT00950000182983.B.a.a	ENSGT00940000157375.c	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752	ENSGT00940000157036.e.a
Japanese Medaka HdrR	MODERN SPECIES	18	ENSORLG00000005449	dmap1 (ENSORLG00000005421)	hnrnpm (ENSORLG00000005400)	timm44 (ENSORLG00000005377)	CTXN1 (ENSORLG00000005358)	fbn2b (ENSORLG00000005344)	ENSORLG00000005166	cers4a (ENSORLG00000005206) ##36	lsm7 (ENSORLG00000023951)	ENSORLG00000023312	ENSORLG00000005158	timm13 (ENSORLG00000024730)	enc3 (ENSORLG00000005152)	arhgef18b (ENSORLG00000028828)	tmem59l (ENSORLG00000028151) #30	ssbp4 (ENSORLG00000005123) #22	fkbp8 (ENSORLG00000005099) #25	ell (ENSORLG00000005084) #24	DOT1L (ENSORLG00000005068)	amh (ENSORLG00000005044)	oaz1a (ENSORLG00000005036)	org (ENSORLG00000025930)	lingo3a (ENSORLG00000005032)	ENSORLG00000030341	ENSORLG00000005022	ONECUT3 (ENSORLG00000004983)	foxq2 (ENSORLG00000004973)	pias4a (ENSORLG00000004970)	map2k2a (ENSORLG00000004940)	ENSORLG00000028662	tcf3b (ENSORLG00000004923)
Chinese medaka	MODERN SPECIES	1224																ssbp4 (ENSOSIG00000022445) #22
Oryzias_b	ANCESTRAL SPECIES	15															ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000157036.e.a	ENSGT00950000183005.b.b	ENSGT00940000155402.a.a	ENSGT00940000161905.a
Javanese ricefish	MODERN SPECIES	18	ENSOJAG00000003687	ENSOJAG00000018154	ENSOJAG00000018131	ENSOJAG00000017984	tpm4b (ENSOJAG00000017192)	ENSOJAG00000017104	ENSOJAG00000017070	lpl (ENSOJAG00000016761)	safb (ENSOJAG00000016731)	malt2 (ENSOJAG00000016716)	mrpl54 (ENSOJAG00000016694)	fam32a (ENSOJAG00000016675)	fh (ENSOJAG00000016667)	ENSOJAG00000016665	tmem59l (ENSOJAG00000016651) #30	ssbp4 (ENSOJAG00000016362) #22	fkbp8 (ENSOJAG00000016233) #25	amh (ENSOJAG00000015770)	oaz1a (ENSOJAG00000015725)	org (ENSOJAG00000015705)	lingo3a (ENSOJAG00000015696)	ENSOJAG00000015689	ONECUT3 (ENSOJAG00000015662)	foxq2 (ENSOJAG00000015641)	pias4a (ENSOJAG00000015590)	ENSOJAG00000015542	UQCR11 (ENSOJAG00000015495)	ENSOJAG00000015401	hmg20b (ENSOJAG00000010917)	ENSOJAG00000010787	ENSOJAG00000010781
Indian medaka	MODERN SPECIES	34															tmem59l (ENSOMEG00000004457) #30	ssbp4 (ENSOMEG00000004535) #22	fkbp8 (ENSOMEG00000004564) #25	DOT1L (ENSOMEG00000004592)	amh (ENSOMEG00000004606)	ENSOMEG00000004621	ENSOMEG00000004630	org (ENSOMEG00000004666)	lingo3a (ENSOMEG00000004678)	ENSOMEG00000004684	ENSOMEG00000004692	ENSOMEG00000004699	ATP8B3 (ENSOMEG00000004754)	ONECUT3 (ENSOMEG00000004789)	ENSOMEG00000004801	foxq2 (ENSOMEG00000004808)	pias4a (ENSOMEG00000004827)
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Mangrove rivulus	MODERN SPECIES	8	plin3 (ENSKMAG00000002540)	zgc:77486 (ENSKMAG00000002567)	ABHD17A (ENSKMAG00000002579)	rgl1 (ENSKMAG00000002602)	colgalt2b (ENSKMAG00000002674)	zgc:92140 (ENSKMAG00000002721)	EDEM3 (ENSKMAG00000002744)	npl (ENSKMAG00000002773)	sec22bb (ENSKMAG00000002795)	notch2 (ENSKMAG00000002824)	slc35a3a (ENSKMAG00000002847)	FAM78B (ENSKMAG00000002861)	rex1bd (ENSKMAG00000002873)	crlf1b (ENSKMAG00000002890) #29	tmem59l (ENSKMAG00000002932) #30	ssbp4 (ENSKMAG00000002949) #22	fkbp8 (ENSKMAG00000002964) #25	ell (ENSKMAG00000002974) #24	DOT1L (ENSKMAG00000002991)	amh (ENSKMAG00000003028)	oaz1a (ENSKMAG00000003091)	ENSKMAG00000003113	org (ENSKMAG00000003127)	lingo3a (ENSKMAG00000003141)	nfil3-4 (ENSKMAG00000003148)	ENSKMAG00000003171	ONECUT3 (ENSKMAG00000003238)	foxq2 (ENSKMAG00000003247)	pias4a (ENSKMAG00000003261)	map2k2a (ENSKMAG00000003286)	ENSKMAG00000003340
Turquoise killifish	MODERN SPECIES	1626	rgl1 (ENSNFUG00015016431)	ENSNFUG00015016522	colgalt2b (ENSNFUG00015016526)	C1ORF21 (ENSNFUG00015016553)	EDEM3 (ENSNFUG00015016578)	Nfu_g_1_022701 (ENSNFUG00015016609)	NOTCH2 (ENSNFUG00015016699)	slc35a3a (ENSNFUG00015019100)	ENSNFUG00015019108	FAM78B (ENSNFUG00015019110)	ENSNFUG00015019112	C22H19ORF60 (ENSNFUG00015019118)	crlf1b (ENSNFUG00015019127) #29	TMEM59L (ENSNFUG00015019145) #30	ENSNFUG00015019152	ssbp4 (ENSNFUG00015019157) #22	FKBP8 (ENSNFUG00015019178) #25	ELL (ENSNFUG00015019193) #24	ATP8B3 (ENSNFUG00015019212)	ONECUT3 (ENSNFUG00015019230)	foxq2 (ENSNFUG00015019237)	PIAS4A (ENSNFUG00015019242)	map2k2a (ENSNFUG00015019263)	ENSNFUG00015019585	tcf3b (ENSNFUG00015019599)	Nfu_g_1_016071 (ENSNFUG00015019731)	ENSNFUG00015019742	mbd3b (ENSNFUG00015019783)	ENSNFUG00015020116	HMG20B (ENSNFUG00015023480)	EEF2 (ENSNFUG00015023495)
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030.yc	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
Poecilia	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030.yc	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f
NAME_6	ANCESTRAL SPECIES	322											ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809
Amazon molly	MODERN SPECIES	682										ENSPFOG00000002860	slc35a3a (ENSPFOG00000002609)	FAM78B (ENSPFOG00000002589)	rex1bd (ENSPFOG00000002562)	crlf1b (ENSPFOG00000002489) #29	tmem59l (ENSPFOG00000002415) #30	ssbp4 (ENSPFOG00000002131) #22	fkbp8 (ENSPFOG00000002003) #25	ell (ENSPFOG00000001842) #24	DOT1L (ENSPFOG00000001183)	amh (ENSPFOG00000001033)	ENSPFOG00000001007	oaz1a (ENSPFOG00000000962)	ENSPFOG00000022513	ENSPFOG00000024365	org (ENSPFOG00000000938)
Sailfin molly	MODERN SPECIES	417									ENSPLAG00000023061	ENSPLAG00000023085	slc35a3a (ENSPLAG00000023091)	FAM78B (ENSPLAG00000023101)	rex1bd (ENSPLAG00000023133)	crlf1b (ENSPLAG00000023332) #29	tmem59l (ENSPLAG00000023389) #30	ssbp4 (ENSPLAG00000023538) #22	fkbp8 (ENSPLAG00000023549) #25	ell (ENSPLAG00000023559) #24	DOT1L (ENSPLAG00000023584)	amh (ENSPLAG00000023721)	oaz1a (ENSPLAG00000000499)	ENSPLAG00000023790	org (ENSPLAG00000023799)
Guppy	MODERN SPECIES	456	plin3 (ENSPREG00000009691)	zgc:77486 (ENSPREG00000009668)	ABHD17A (ENSPREG00000009650)	rgl1 (ENSPREG00000009602)	colgalt2b (ENSPREG00000009544)	zgc:92140 (ENSPREG00000009529)	EDEM3 (ENSPREG00000009473)	npl (ENSPREG00000009444)	sec22bb (ENSPREG00000009413)	notch2 (ENSPREG00000009363)	slc35a3a (ENSPREG00000009339)	FAM78B (ENSPREG00000009329)	rex1bd (ENSPREG00000009294)	crlf1b (ENSPREG00000009248) #29	tmem59l (ENSPREG00000009222) #30	ssbp4 (ENSPREG00000009177) #22	fkbp8 (ENSPREG00000009088) #25	ell (ENSPREG00000009061) #24	DOT1L (ENSPREG00000008971)	amh (ENSPREG00000008895)	oaz1a (ENSPREG00000008867)	ENSPREG00000008855	org (ENSPREG00000008841)	lingo3a (ENSPREG00000008825)	nfil3-4 (ENSPREG00000008822)	ENSPREG00000008799	ENSPREG00000008766	ONECUT3 (ENSPREG00000008755)	foxq2 (ENSPREG00000008748)	pias4a (ENSPREG00000008712)	map2k2a (ENSPREG00000008664)
Platyfish	MODERN SPECIES	23	plin3 (ENSXMAG00000012990)	zgc:77486 (ENSXMAG00000029652)	ABHD17A (ENSXMAG00000012985)	rgl1 (ENSXMAG00000012969)	colgalt2b (ENSXMAG00000012963)	zgc:92140 (ENSXMAG00000027601)	EDEM3 (ENSXMAG00000012953)	npl (ENSXMAG00000012932)	sec22bb (ENSXMAG00000025257)	notch2 (ENSXMAG00000012925)	slc35a3a (ENSXMAG00000012913)	FAM78B (ENSXMAG00000012912)	rex1bd (ENSXMAG00000024002)	crlf1b (ENSXMAG00000012905) #29	tmem59l (ENSXMAG00000012900) #30	ssbp4 (ENSXMAG00000021860) #22	fkbp8 (ENSXMAG00000012879) #25	ell (ENSXMAG00000012869) #24	DOT1L (ENSXMAG00000012854)	amh (ENSXMAG00000012844)	oaz1a (ENSXMAG00000012841)	ENSXMAG00000020927	org (ENSXMAG00000030019)	lingo3a (ENSXMAG00000019590)	nfil3-4 (ENSXMAG00000019944)	ENSXMAG00000022500	ENSXMAG00000012771	ONECUT3 (ENSXMAG00000012769)	foxq2 (ENSXMAG00000021529)	pias4a (ENSXMAG00000021264)	map2k2a (ENSXMAG00000021375)
NAME_4	ANCESTRAL SPECIES	17	ENSGT00950000182920.b.a.a	ENSGT00940000166091	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Sheepshead minnow	MODERN SPECIES	373			ENSCVAG00000016256	rgl1 (ENSCVAG00000016384)	colgalt2b (ENSCVAG00000016396)	zgc:92140 (ENSCVAG00000016410)	EDEM3 (ENSCVAG00000016565)	npl (ENSCVAG00000016577)	sec22bb (ENSCVAG00000016608)	notch2 (ENSCVAG00000016635)	slc35a3a (ENSCVAG00000016827)	FAM78B (ENSCVAG00000016848)	rex1bd (ENSCVAG00000016866)	crlf1b (ENSCVAG00000016874) #29	tmem59l (ENSCVAG00000016909) #30	ssbp4 (ENSCVAG00000016987) #22	fkbp8 (ENSCVAG00000017001) #25	ell (ENSCVAG00000017084) #24	DOT1L (ENSCVAG00000017122)	amh (ENSCVAG00000017392)	oaz1a (ENSCVAG00000017453)	ENSCVAG00000017460	org (ENSCVAG00000017464)	lingo3a (ENSCVAG00000017476)	nfil3-4 (ENSCVAG00000017490)	ENSCVAG00000017513	ONECUT3 (ENSCVAG00000017518)	foxq2 (ENSCVAG00000017544)	pias4a (ENSCVAG00000017561)	map2k2a (ENSCVAG00000017585)	ENSCVAG00000017592
Mummichog	MODERN SPECIES	2215	plin3 (ENSFHEG00000001716)	ENSFHEG00000001722	ABHD17A (ENSFHEG00000001730)	rgl1 (ENSFHEG00000001745)	colgalt2b (ENSFHEG00000001750)	ENSFHEG00000001751	EDEM3 (ENSFHEG00000001782)	npl (ENSFHEG00000001803)	sec22bb (ENSFHEG00000001811)	notch2 (ENSFHEG00000001828)	slc35a3a (ENSFHEG00000001838)	FAM78B (ENSFHEG00000001845)	rex1bd (ENSFHEG00000001855)	crlf1b (ENSFHEG00000001889) #29	tmem59l (ENSFHEG00000001902) #30	ssbp4 (ENSFHEG00000001931) #22	ell (ENSFHEG00000001961) #24	DOT1L (ENSFHEG00000001988)	amh (ENSFHEG00000001997)	oaz1a (ENSFHEG00000002002)	ENSFHEG00000002008	org (ENSFHEG00000002010)	ENSFHEG00000002014	nfil3-4 (ENSFHEG00000002017)
Otomorpha	ANCESTRAL SPECIES	5	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Clupeiformes	ANCESTRAL SPECIES	279			ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	1	rps28 (ENSCHAG00000004868)	kank3 (ENSCHAG00000004844)	s1pr3a (ENSCHAG00000004828)	shdb (ENSCHAG00000004804)	ENSCHAG00000004796	ENSCHAG00000004769	shc2 (ENSCHAG00000004671)	cks2 (ENSCHAG00000004636)	odf3l2b (ENSCHAG00000004524)	ENSCHAG00000004419	SAC3D1 (ENSCHAG00000004400)	ENSCHAG00000004354	rex1bd (ENSCHAG00000004305)	crlf1b (ENSCHAG00000003479) #29	tmem59l (ENSCHAG00000003406) #30	ssbp4 (ENSCHAG00000003297) #22	fkbp8 (ENSCHAG00000003120) #25	ell (ENSCHAG00000003040) #24	ENSCHAG00000003026	DOT1L (ENSCHAG00000002671)	amh (ENSCHAG00000002616)	oaz1a (ENSCHAG00000002416)	org (ENSCHAG00000002353)	lingo3a (ENSCHAG00000002340)	ENSCHAG00000020805	dad1 (ENSCHAG00000020790)	ABHD4 (ENSCHAG00000020777)	ENSCHAG00000020763	ENSCHAG00000020702	stxbp3 (ENSCHAG00000020511)	FNDC7 (ENSCHAG00000020405)
Atlantic herring	MODERN SPECIES	14	mcm6l (ENSCHAG00000014132)	ahrrb (ENSCHAG00000014574)	exoc3 (ENSCHAG00000014821)	ENSCHAG00000014886	si:ch211-106n13.3 (ENSCHAG00000014894)	ENSCHAG00000014904	hecw1b (ENSCHAG00000014942)	STK17A (ENSCHAG00000015965)	COA1 (ENSCHAG00000015981)	blvra (ENSCHAG00000015988)	wdr48b (ENSCHAG00000016003)	ebi3 (ENSCHAG00000016371)	odf3l2a (ENSCHAG00000016378)	crlf1a (ENSCHAG00000016385) #29	keap1a (ENSCHAG00000016445)	SSBP4 (ENSCHAG00000016455) #22	ZNF622 (ENSCHAG00000016510)	xpa (ENSCHAG00000016539)	mttp (ENSCHAG00000016729)	MICU3 (ENSCHAG00000017629)	fgf20a (ENSCHAG00000017716)	tusc3 (ENSCHAG00000017739)	ENSCHAG00000017817	SGCZ (ENSCHAG00000017907)	DLC1 (ENSCHAG00000017965)	LONRF1 (ENSCHAG00000018081)	ENSCHAG00000018104	doc2d (ENSCHAG00000018170)	serping1 (ENSCHAG00000018251)	tmem134 (ENSCHAG00000018260)	frg1 (ENSCHAG00000018275)
Denticle herring	MODERN SPECIES	14	YEATS2 (ENSDCDG00000000576)	ENSDCDG00000000555	acsm3 (ENSDCDG00000000527)	EEF1AKMT4 (ENSDCDG00000000507)	camk2n1a (ENSDCDG00000000496)	mul1a (ENSDCDG00000000491)	alg3 (ENSDCDG00000000484)	VWA5B2 (ENSDCDG00000000464)	ENSDCDG00000000452	blvra (ENSDCDG00000000442)	wdr48b (ENSDCDG00000000407)	ebi3 (ENSDCDG00000000353)	odf3l2a (ENSDCDG00000000339)	crlf1a (ENSDCDG00000000327) #29	keap1a (ENSDCDG00000000314)	zgc:110158 (ENSDCDG00000000248) #22	ZNF622 (ENSDCDG00000032748)	d2hgdh (ENSDCDG00000032743)	acvr1l (ENSDCDG00000032726)	otomp (ENSDCDG00000032724)	ENSDCDG00000032723	ENSDCDG00000032722	hs6st1a (ENSDCDG00000032718)	uggt1 (ENSDCDG00000032456)	epha4b (ENSDCDG00000032143)	ENSDCDG00000032102	ENSDCDG00000032099	ENSDCDG00000032096	epha4a (ENSDCDG00000031988)	ENSDCDG00000031974	slc25a36a (ENSDCDG00000031968)
Otophysi	ANCESTRAL SPECIES	52						ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT01030000236343	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634
Cyprinoidei	ANCESTRAL SPECIES	17	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a	ENSGT01030000234519.e.a.a.b.b.a.b.g	ENSGT01030000234519.e.a.a.b.b.a.b.h	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a.c	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a.c #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00990000206265	ENSGT00940000159808.c	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	113	ENSGT00940000161259.B.a.c	ENSGT00940000165296.d.a.a.a	ENSGT00940000162569.b.k.a.d	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.b	ENSGT01030000234519.e.a.a.b.a.a.b.b.d	ENSGT01030000234519.e.a.a.b.b.a.b.g.b	ENSGT01030000234519.e.a.a.b.b.a.b.h.f	ENSGT00940000155885.b.d.a	ENSGT01030000234573.A.b.b.a.f	ENSGT01050000244887.A.b.a.d	ENSGT00940000159004.b.i	ENSGT00940000159237.`b.a.b	ENSGT00950000182870.a.a.a.a.h	ENSGT00940000166035.g.b	ENSGT00390000008279.b.j #30	ENSGT00950000183049.C.a.a.g.a #22	ENSGT00940000156705.d #25	ENSGT00940000155914.c.a.c.a #24	ENSGT00390000013515.e	ENSGT00390000006337.b	ENSGT00940000159808.d	ENSGT00390000006809.a	ENSGT00940000164500.b.a	ENSGT00940000164108.b.a.a	ENSGT00950000183103.d.b.a.b.d	ENSGT00940000166634.a	ENSGT01030000234539.a.a.a.f.e	ENSGT00940000153487.b.a.s.a.a	ENSGT00940000166752.d	ENSGT00940000157036.e.a.b	ENSGT00940000157036.e.a.a.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	41	ENSCARG00000054405	ENSCARG00000054396	P3H2 (ENSCARG00000054205)	ENSCARG00000054166	ENSCARG00000054136	lpar3 (ENSCARG00000054110)	ENSCARG00000054038	ENSCARG00000048786	ENSCARG00000048586	ENSCARG00000048572	rxfp3.2b (ENSCARG00000048562)	creb3l3a (ENSCARG00000048493)	btbd2a (ENSCARG00000048422)	hmg20b (ENSCARG00000048390)	ENSCARG00000047047	ssbp4 (ENSCARG00000038496) #22	fkbp8 (ENSCARG00000038126) #25	ell (ENSCARG00000037628) #24	DOT1L (ENSCARG00000034904)	oaz1a (ENSCARG00000034806)	org (ENSCARG00000034797)	lingo3a (ENSCARG00000034795)	nfil3-4 (ENSCARG00000034791)	ENSCARG00000034787	foxq2 (ENSCARG00000034784)	pias4a (ENSCARG00000034726)	map2k2a (ENSCARG00000034521)	ENSCARG00000034500	ENSCARG00000034489	ENSCARG00000034482	ENSCARG00000034471
Goldfish	MODERN SPECIES	411																ssbp4 (ENSCARG00000022809) #22	fkbp8 (ENSCARG00000022720) #25	ell (ENSCARG00000022236) #24
Cyprininae_a	ANCESTRAL SPECIES	40	ENSGT00940000161259.B.a.c	ENSGT00940000165296.c.a	ENSGT00940000165296.d.a.a.a	ENSGT00940000165296.d.a.b	ENSGT00940000162569.b.k.a.d	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.b	ENSGT01030000234519.e.a.a.b.a.a.b.b.d	ENSGT00990000214147	ENSGT01030000234519.e.a.a.b.b.a.b.h.f	ENSGT00940000155885.b.d.a	ENSGT01030000234573.A.b.b.a.f	ENSGT01050000244887.A.b.a.d	ENSGT00940000159004.b.i	ENSGT00940000166035.g.b	ENSGT00390000008279.b.j #30	ENSGT00950000183049.C.a.a.g.a #22	ENSGT00940000156705.d #25	ENSGT00940000155914.c.a.c.a #24	ENSGT00390000013515.e	ENSGT00390000006337.b	ENSGT00990000206265	ENSGT00940000159808.c	ENSGT00390000006809.b	ENSGT00940000164500.b.b	ENSGT00940000164108.b.a.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.c	ENSGT00940000166634.b	ENSGT01030000234539.a.a.a.f.f	ENSGT00940000153487.b.a.s.a.b
Golden-line barbel	MODERN SPECIES	80	gna11a (ENSSGRG00000032212)	tle5 (ENSSGRG00000032211)	ENSSGRG00000032209	ENSSGRG00000032207	tle2a (ENSSGRG00000031261)	plpp2b (ENSSGRG00000031250)	mier2 (ENSSGRG00000031249)	s1pr3a (ENSSGRG00000031248)	shdb (ENSSGRG00000031247)	ENSSGRG00000031243	shc2 (ENSSGRG00000031241)	odf3l2b (ENSSGRG00000031240)	ENSSGRG00000031238	rex1bd (ENSSGRG00000031237)	tmem59l (ENSSGRG00000031235) #30	ssbp4 (ENSSGRG00000031232) #22	ENSSGRG00000031231	fkbp8 (ENSSGRG00000031230) #25	ENSSGRG00000031229 #24	ell (ENSSGRG00000031228) #24	DOT1L (ENSSGRG00000030620)	amh (ENSSGRG00000030600)	ENSSGRG00000030599	OAZ1 (ENSSGRG00000030597)	org (ENSSGRG00000030593)	lingo3a (ENSSGRG00000030591)	nfil3-4 (ENSSGRG00000030590)	ENSSGRG00000030585	foxq2 (ENSSGRG00000030584)	pias4a (ENSSGRG00000030505)	map2k2a (ENSSGRG00000030424)
Common carp reference	MODERN SPECIES	43	ENSCCRG00000065782	gna11a (ENSCCRG00000042299)	tle5 (ENSCCRG00000056786)	ENSCCRG00000009409	tle2a (ENSCCRG00000013385)	plpp2b (ENSCCRG00000068532)	mier2 (ENSCCRG00000063845)	s1pr3a (ENSCCRG00000077483)	shdb (ENSCCRG00000069399)	ENSCCRG00000022369	cks2 (ENSCCRG00000061597)	shc2 (ENSCCRG00000010985)	rex1bd (ENSCCRG00000013600)	crlf1b (ENSCCRG00000013604) #29	tmem59l (ENSCCRG00000043131) #30	ssbp4 (ENSCCRG00000074172) #22	fkbp8 (ENSCCRG00000066292) #25	ell (ENSCCRG00000006843) #24	ENSCCRG00000013709	oaz1a (ENSCCRG00000075310)	org (ENSCCRG00000012483)	lingo3a (ENSCCRG00000059109)	nfil3-4 (ENSCCRG00000081096)	ENSCCRG00000075061	ENSCCRG00000037829	ENSCCRG00000060562	pias4a (ENSCCRG00000074259)	map2k2a (ENSCCRG00000012624)	ENSCCRG00000013530	tcf3b (ENSCCRG00000013163)	ENSCCRG00000013220
Cyprininae	ANCESTRAL SPECIES	321						ENSGT01050000244887.A.b.a.c	ENSGT00940000159004.b.j	ENSGT00940000159237.ab	ENSGT00950000182870.a.a.a.a.i	ENSGT00950000182971.B.a.a.c	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035.g.a	ENSGT00940000156569.a.b.b.d #29	ENSGT00390000008279.b.i #30	ENSGT00950000183049.C.a.a.g.b #22	ENSGT00940000156705.c #25	ENSGT00940000155914.c.a.c.b #24	ENSGT00390000013515.f	ENSGT00390000006337.a	ENSGT00990000206265	ENSGT00940000159808.c	ENSGT00390000006809.b	ENSGT00940000164500.b.b	ENSGT00940000164108.b.a.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b.c	ENSGT00940000166634.b	ENSGT01030000234539.a.a.a.f.f	ENSGT00940000153487.b.a.s.a.b
Cyprininae_a	ANCESTRAL SPECIES	180	ENSGT01030000234519.e.a.a.b.b.a.b.h.e	ENSGT00940000155885.b.d.b	ENSGT01030000234573.A.b.b.a.e	ENSGT01050000244887.A.b.a.c	ENSGT00940000159004.b.j	ENSGT00940000159237.ab	ENSGT00950000182870.a.a.a.a.i	ENSGT00950000182971.B.a.a.c	ENSGT00940000159237.`b.a.b	ENSGT00950000182870.a.a.a.a.h	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035.g.a	ENSGT00940000156569.a.b.b.d #29	ENSGT00390000008279.b.i #30	ENSGT00950000183049.C.a.a.g.b #22	ENSGT00940000156705.c #25	ENSGT00940000155914.c.a.c.b #24	ENSGT00390000013515.f	ENSGT00390000006337.a
Common carp reference	MODERN SPECIES	5	gna11a (ENSCCRG00000066289)	tle5 (ENSCCRG00000059065)	ENSCCRG00000016739	tle2a (ENSCCRG00000013380)	plpp2b (ENSCCRG00000011015)	mier2 (ENSCCRG00000012343)	s1pr3a (ENSCCRG00000057122)	shdb (ENSCCRG00000011003)	ENSCCRG00000078847	ENSCCRG00000010991	shc2 (ENSCCRG00000069472)	ENSCCRG00000032956	odf3l2b (ENSCCRG00000061293)	tmem59l (ENSCCRG00000053493) #30	crlf1b (ENSCCRG00000065430) #29	ssbp4 (ENSCCRG00000006791) #22	fkbp8 (ENSCCRG00000006820) #25	ell (ENSCCRG00000059038) #24	ENSCCRG00000012505	amh (ENSCCRG00000072618)	ENSCCRG00000078544	org (ENSCCRG00000012537)	lingo3a (ENSCCRG00000060670)	nfil3-4 (ENSCCRG00000059003)	ENSCCRG00000077658	ENSCCRG00000074375	ENSCCRG00000064529	foxq2 (ENSCCRG00000013528)	pias4a (ENSCCRG00000012580)	map2k2a (ENSCCRG00000074928)	ENSCCRG00000013144
Golden-line barbel	MODERN SPECIES	168	ENSSGRG00000000865	tle2a (ENSSGRG00000000589)	plpp2b (ENSSGRG00000000560)	mier2 (ENSSGRG00000000559)	s1pr3a (ENSSGRG00000000557)	shdb (ENSSGRG00000000555)	ENSSGRG00000000554	shc2 (ENSSGRG00000000549)	cks2 (ENSSGRG00000000545)	odf3l2b (ENSSGRG00000000544)	ENSSGRG00000000536	rex1bd (ENSSGRG00000000530)	crlf1b (ENSSGRG00000000528) #29	tmem59l (ENSSGRG00000000523) #30	ENSSGRG00000000522	ssbp4 (ENSSGRG00000000521) #22	fkbp8 (ENSSGRG00000000493) #25	ENSSGRG00000000491 #24	ENSSGRG00000000208	amh (ENSSGRG00000000095)	ENSSGRG00000054856	org (ENSSGRG00000054853)
Goldfish	MODERN SPECIES	14	NCAN (ENSCARG00000003941)	nr2c2ap (ENSCARG00000024787)	rfxank (ENSCARG00000024768)	borcs8 (ENSCARG00000024744)	s1pr3a (ENSCARG00000024735)	shdb (ENSCARG00000024708)	ENSCARG00000024697	ENSCARG00000024681	shc2 (ENSCARG00000024648)	cks2 (ENSCARG00000024628)	odf3l2b (ENSCARG00000024608)	CPAMD8 (ENSCARG00000024599)	rex1bd (ENSCARG00000024574)	crlf1b (ENSCARG00000024540) #29	tmem59l (ENSCARG00000024509) #30	ssbp4 (ENSCARG00000022243) #22	fkbp8 (ENSCARG00000022152) #25	ell (ENSCARG00000021813) #24	DOT1L (ENSCARG00000021302)	amh (ENSCARG00000021243)	OAZ1 (ENSCARG00000021229)	org (ENSCARG00000021226)	lingo3a (ENSCARG00000021222)	nfil3-4 (ENSCARG00000021220)	ENSCARG00000021210	ENSCARG00000021165	ENSCARG00000021132	ENSCARG00000021109	ENSCARG00000021097	ENSCARG00000021092	ENSCARG00000021085
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	72	ENSGT00940000156840.p	ENSGT00940000162297.c.b.b	ENSGT00940000154265.mc.k.a.a	ENSGT00940000154265.lc.a.j.a.a	ENSGT00940000154265.mc.k.a.b	ENSGT00940000162297.c.a	ENSGT00940000154265.lc.a.j.a.b	ENSGT00940000160694.h.b	ENSGT00940000160050	ENSGT00940000160480.c.b.a	ENSGT00940000156569.a.b.a.c #29	ENSGT00940000165458.a	ENSGT00940000160480.c.b.b	ENSGT00940000156569.a.b.a.d #29	ENSGT00940000165458.b	ENSGT00950000183049.C.a.a.h.a #22	ENSGT00390000018047.u	ENSGT00550000075086.b	ENSGT00940000166078.a	ENSGT00940000166763.a	ENSGT00950000183071.a.a.b.c.c.c	ENSGT00390000004600.b.a.i	ENSGT00940000165265.g.a.c	ENSGT00990000209937.a.b	ENSGT00990000209937.a.a	ENSGT00990000209992.B	ENSGT00990000208442.a.a	ENSGT00940000173713.g	ENSGT01030000235105.a	ENSGT00940000156948.i.b.b	ENSGT00940000154369.g.a
Cyprininae_a	ANCESTRAL SPECIES	84									ENSGT00940000154265.mc.k.a.b	ENSGT00940000162297.c.a	ENSGT00940000154265.lc.a.j.a.b	ENSGT00940000160694.h.b	ENSGT00940000160480.c.b.b	ENSGT00940000156569.a.b.a.d #29	ENSGT00940000165458.b	ENSGT00950000183049.C.a.a.h.a #22	ENSGT00390000018047.u	ENSGT00550000075086.b	ENSGT00940000166078.a	ENSGT00940000166763.a	ENSGT00950000183071.a.a.b.c.c.c	ENSGT00390000004600.b.a.i	ENSGT00940000165265.g.a.c	ENSGT00990000209937.a.b	ENSGT00990000209937.a.a	ENSGT00990000209992.B	ENSGT00990000208442.a.a	ENSGT00940000173713.h.b.a	ENSGT01030000235105.b.a	ENSGT00940000156948.i.b.a	ENSGT00940000154369.g.a.d
Common carp reference	MODERN SPECIES	21	ENSCCRG00000077462	ENSCCRG00000082262	trim55a (ENSCCRG00000031000)	adhfe1 (ENSCCRG00000030828)	ENSCCRG00000030821	ENSCCRG00000057295	gbp1 (ENSCCRG00000033487)	ENSCCRG00000051788	ENSCCRG00000018119	gbp1 (ENSCCRG00000018101)	ENSCCRG00000071871	ENSCCRG00000079340	odf3l2a (ENSCCRG00000018067)	crlf1a (ENSCCRG00000018065) #29	keap1a (ENSCCRG00000015868)	zgc:110158 (ENSCCRG00000063165) #22	ENSCCRG00000011779	d2hgdh (ENSCCRG00000011246)	otomp (ENSCCRG00000079751)	acvr1l (ENSCCRG00000062115)	hs6st1a (ENSCCRG00000074522)	uggt1 (ENSCCRG00000002547)	epha4b (ENSCCRG00000077447)	ENSCCRG00000067743	ENSCCRG00000045104	ENSCCRG00000024391	ENSCCRG00000024388	ENSCCRG00000024385	ENSCCRG00000026063	ENSCCRG00000026069	si:ch211-122l24.6 (ENSCCRG00000082253)
Golden-line barbel	MODERN SPECIES	108	cryz (ENSSGRG00000054536)	tyw3 (ENSSGRG00000054533)	ENSSGRG00000054532	lhx8a (ENSSGRG00000054531)	lhx8a (ENSSGRG00000054530)	ENSSGRG00000054528	ENSSGRG00000054525	ENSSGRG00000054522	ENSSGRG00000054520	gbp1 (ENSSGRG00000054490)	HELZ2 (ENSSGRG00000054479)	ebi3 (ENSSGRG00000054478)	odf3l2a (ENSSGRG00000054477)	crlf1a (ENSSGRG00000054473) #29	keap1a (ENSSGRG00000054468)	zgc:110158 (ENSSGRG00000054461) #22	ZNF622 (ENSSGRG00000054460)	d2hgdh (ENSSGRG00000054459)	acvr1l (ENSSGRG00000054458)	otomp (ENSSGRG00000054456)	hs6st1a (ENSSGRG00000054454)	uggt1 (ENSSGRG00000054396)	ENSSGRG00000054350	TRAPPC8 (ENSSGRG00000054166)	opn7a (ENSSGRG00000054151)	b4galt6 (ENSSGRG00000054114)	ttr (ENSSGRG00000054108)	ENSSGRG00000054107	ENSSGRG00000054106	ENSSGRG00000054105	dsc2l (ENSSGRG00000054104)
Cyprininae	ANCESTRAL SPECIES	671																ENSGT00950000183049.C.a.a.h.b #22	ENSGT00390000018047.v	ENSGT00550000075086.a	ENSGT00940000166078.b	ENSGT00940000166763.b	ENSGT00950000183071.a.a.b.c.c.d	ENSGT00390000004600.b.a.j	ENSGT00940000165265.g.a.d	ENSGT00990000209937.b	ENSGT00990000209992.A	ENSGT00990000208442.a.b	ENSGT00940000173713.h.b.b	ENSGT01030000235105.b.b
Goldfish	MODERN SPECIES	19	UQCR11 (ENSCARG00000017355)	mbd3a (ENSCARG00000017288)	trim55a (ENSCARG00000017258)	VCPIP1 (ENSCARG00000017241)	ENSCARG00000017232	ENSCARG00000017222	gbp1 (ENSCARG00000017159)	gbp1 (ENSCARG00000017071)	ENSCARG00000017040	gbp1 (ENSCARG00000016699)	ENSCARG00000016599	ebi3 (ENSCARG00000016579)	odf3l2a (ENSCARG00000016565)	keap1a (ENSCARG00000016555)	crlf1a (ENSCARG00000016527) #29	zgc:110158 (ENSCARG00000016148) #22	ZNF622 (ENSCARG00000016106)	d2hgdh (ENSCARG00000015626)	acvr1l (ENSCARG00000015593)	otomp (ENSCARG00000015580)	ENSCARG00000015571	hs6st1a (ENSCARG00000015565)	uggt1 (ENSCARG00000015117)	ENSCARG00000015039	epha4b (ENSCARG00000014908)	ENSCARG00000014887	ENSCARG00000014878	ENSCARG00000014866	ENSCARG00000014846	ENSCARG00000014826	fgf24 (ENSCARG00000014794)
Cyprininae_a	ANCESTRAL SPECIES	149	ENSGT00940000177201	ENSGT00990000210441	ENSGT00940000154265.mc.l	ENSGT00940000154265.lc.a.i.a.a	ENSGT00940000154265.mc.k.b	ENSGT00940000154265.lc.b.b.a.a.a.a.b	ENSGT00940000156840.p	ENSGT00940000162297.c.b.b	ENSGT00940000154265.mc.k.a.a	ENSGT00940000154265.lc.a.j.a.a	ENSGT00940000160694.h.a	ENSGT00940000160050	ENSGT00940000160480.c.b.a	ENSGT00940000156569.a.b.a.c #29	ENSGT00940000165458.a	ENSGT00950000183049.C.a.a.h.b #22	ENSGT00390000018047.v	ENSGT00550000075086.a	ENSGT00940000166078.b	ENSGT00940000166763.b	ENSGT00950000183071.a.a.b.c.c.d	ENSGT00390000004600.b.a.j	ENSGT00940000165265.g.a.d	ENSGT00990000209937.b	ENSGT00990000208442.b	ENSGT00940000173713.g	ENSGT01030000235105.b.b	ENSGT00990000209992.A	ENSGT00990000208442.a.b	ENSGT00940000173713.h.a	ENSGT01060000253400
Common carp reference	MODERN SPECIES	29	slc39a6 (ENSCCRG00000020434)	ENSCCRG00000068266	trim55a (ENSCCRG00000020610)	ENSCCRG00000020617	ENSCCRG00000075496	ENSCCRG00000059073	ENSCCRG00000020619	ENSCCRG00000051785	ENSCCRG00000014852	gbp1 (ENSCCRG00000035122)	ENSCCRG00000055972	ebi3 (ENSCCRG00000044302)	odf3l2a (ENSCCRG00000044318)	crlf1a (ENSCCRG00000071906) #29	keap1a (ENSCCRG00000044328)	zgc:110158 (ENSCCRG00000011178) #22	ENSCCRG00000011191	d2hgdh (ENSCCRG00000011782)	acvr1l (ENSCCRG00000011267)	otomp (ENSCCRG00000011789)	hs6st1a (ENSCCRG00000082051)	uggt1 (ENSCCRG00000037592)	epha4b (ENSCCRG00000076007)	ENSCCRG00000054238	ENSCCRG00000080585	ENSCCRG00000065317	ENSCCRG00000066870	ENSCCRG00000082671	ENSCCRG00000077253	ENSCCRG00000035312	epha4a (ENSCCRG00000081582)
Golden-line barbel	MODERN SPECIES	330	trim55a (ENSSGRG00000028133)	ENSSGRG00000028131	adhfe1 (ENSSGRG00000028130)	VCPIP1 (ENSSGRG00000028128)	ENSSGRG00000028127	gbp1 (ENSSGRG00000028121)	ENSSGRG00000028119	gbp1 (ENSSGRG00000028101)	ENSSGRG00000028099	ENSSGRG00000028096	ENSSGRG00000028094	ebi3 (ENSSGRG00000028093)	odf3l2a (ENSSGRG00000028092)	crlf1a (ENSSGRG00000028091) #29	keap1a (ENSSGRG00000028090)	zgc:110158 (ENSSGRG00000028089) #22	d2hgdh (ENSSGRG00000027937)	acvr1l (ENSSGRG00000027927)	otomp (ENSSGRG00000027919)	hs6st1a (ENSSGRG00000027913)	uggt1 (ENSSGRG00000027821)
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	14	tle5 (ENSDARG00000021805)	ENSDARG00000008767	tle2a (ENSDARG00000042484)	plpp2b (ENSDARG00000028896)	mier2 (ENSDARG00000071413)	s1pr3a (ENSDARG00000042470)	shdb (ENSDARG00000062109)	ENSDARG00000062103	shc2 (ENSDARG00000062080)	cks2 (ENSDARG00000071410)	odf3l2b (ENSDARG00000021432)	CPAMD8 (ENSDARG00000056530)	rex1bd (ENSDARG00000073867)	crlf1b (ENSDARG00000006368) #29	tmem59l (ENSDARG00000003655) #30	ssbp4 (ENSDARG00000056483) #22	fkbp8 (ENSDARG00000001734) #25	ell (ENSDARG00000000568) #24	DOT1L (ENSDARG00000061992)	amh (ENSDARG00000014357)	ENSDARG00000092274	ENSDARG00000101128	oaz1a (ENSDARG00000071403)	ENSDARG00000094273	org (ENSDARG00000076474)	lingo3a (ENSDARG00000061970)	nfil3-4 (ENSDARG00000092346)	ENSDARG00000071398	ENSDARG00000042285	ENSDARG00000056395	foxq2 (ENSDARG00000071394)
Zebrafish	MODERN SPECIES	11	slc39a6 (ENSDARG00000068143)	CYP7B1 (ENSDARG00000008858)	trim55a (ENSDARG00000029596)	ENSDARG00000093401	adhfe1 (ENSDARG00000053518)	ENSDARG00000095649	VCPIP1 (ENSDARG00000060177)	ENSDARG00000091628	gbp1 (ENSDARG00000038668)	ENSDARG00000038669	ENSDARG00000012600	ebi3 (ENSDARG00000053620)	odf3l2a (ENSDARG00000014209)	crlf1a (ENSDARG00000024365) #29	keap1a (ENSDARG00000016132)	SSBP4 (ENSDARG00000056490) #22	ZNF622 (ENSDARG00000014692)	d2hgdh (ENSDARG00000060210)	acvr1l (ENSDARG00000014986)	otomp (ENSDARG00000040306)	hs6st1a (ENSDARG00000054754)	uggt1 (ENSDARG00000054746)	epha4b (ENSDARG00000011600)	ccl34a.4 (ENSDARG00000090873)	ccl34a.3 (ENSDARG00000094983)	si:ch211-122l24.6 (ENSDARG00000112759)	ENSDARG00000112125	epha4a (ENSDARG00000054454)	slc25a36a (ENSDARG00000038731)	zgc:136870 (ENSDARG00000054837)	spsb4a (ENSDARG00000016084)
Characiphysae	ANCESTRAL SPECIES	20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a.j	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000165728	ENSGT00940000159593	ENSGT00940000155387.d
Channel catfish	MODERN SPECIES	26	XPR1 (ENSIPUG00000008923)	DDR2 (ENSIPUG00000008852)	ENSIPUG00000008833	rgs5b (ENSIPUG00000008824)	ENSIPUG00000008813	rgs18 (ENSIPUG00000008757)	ENSIPUG00000008747	rgs13 (ENSIPUG00000008733)	ENSIPUG00000008717	blvra (ENSIPUG00000008694)	wdr48b (ENSIPUG00000008547)	ebi3 (ENSIPUG00000008505)	odf3l2a (ENSIPUG00000008484)	crlf1 (ENSIPUG00000008457) #29	keap1a (ENSIPUG00000008421)	Ssbp3 (ENSIPUG00000008191) #22	znf622 (ENSIPUG00000008147)	d2hgdh (ENSIPUG00000008094)	acvr1l (ENSIPUG00000008043)	otomp (ENSIPUG00000008009)	ENSIPUG00000008000	hs6st1a (ENSIPUG00000007988)	uggt1 (ENSIPUG00000007756)	epha4b (ENSIPUG00000007629)	ENSIPUG00000007607	ENSIPUG00000007598	ENSIPUG00000007592	ccl20l (ENSIPUG00000007562)	epha4 (ENSIPUG00000007517)	slc25a36 (ENSIPUG00000007464)	spsb4a (ENSIPUG00000007449)
Characiphysae_b	ANCESTRAL SPECIES	27						ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a.j	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000165728	ENSGT00940000159593	ENSGT00940000155387.d
Characoidei	ANCESTRAL SPECIES	16						ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a.j	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT01030000236343	ENSGT00940000159808	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.b	ENSGT00940000166634	ENSGT00940000165728	ENSGT00940000159593
Red-bellied piranha	MODERN SPECIES	66	rgs5b (ENSPNAG00000025748)	ENSPNAG00000003956	rgs18 (ENSPNAG00000025684)	RGS1 (ENSPNAG00000025669)	rgs13 (ENSPNAG00000025652)	RGS2 (ENSPNAG00000025645)	ENSPNAG00000004724	ENSPNAG00000025623	blvra (ENSPNAG00000025610)	wdr48b (ENSPNAG00000025589)	ebi3 (ENSPNAG00000025513)	odf3l2a (ENSPNAG00000005673)	crlf1a (ENSPNAG00000025478) #29	keap1a (ENSPNAG00000025437)	ENSPNAG00000025414	zgc:110158 (ENSPNAG00000025374) #22	ZNF622 (ENSPNAG00000025225)	d2hgdh (ENSPNAG00000025194)	acvr1l (ENSPNAG00000025117)	otomp (ENSPNAG00000025070)	hs6st1a (ENSPNAG00000025013)	uggt1 (ENSPNAG00000024958)	epha4b (ENSPNAG00000024582)
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	20	ENSAMXG00000041362	tle2a (ENSAMXG00000017871)	plpp2b (ENSAMXG00000033432)	mier2 (ENSAMXG00000017858)	s1pr3a (ENSAMXG00000025819)	shdb (ENSAMXG00000034569)	ENSAMXG00000033433	ENSAMXG00000017840	shc2 (ENSAMXG00000017823)	cks2 (ENSAMXG00000040722)	odf3l2b (ENSAMXG00000037822)	CPAMD8 (ENSAMXG00000017810)	rex1bd (ENSAMXG00000041343)	crlf1b (ENSAMXG00000017785) #29	tmem59l (ENSAMXG00000017776) #30	ssbp4 (ENSAMXG00000039554) #22	fkbp8 (ENSAMXG00000017739) #25	ENSAMXG00000029526	ell (ENSAMXG00000017724) #24	DOT1L (ENSAMXG00000017709)	amh (ENSAMXG00000032908)	ENSAMXG00000042900	oaz1a (ENSAMXG00000037201)	org (ENSAMXG00000017697)	lingo3a (ENSAMXG00000025818)	nfil3-4 (ENSAMXG00000025817)	ENSAMXG00000017689	ONECUT3 (ENSAMXG00000034040)	foxq2 (ENSAMXG00000032826)	si:ch211-129c21.1 (ENSAMXG00000017683)	ENSAMXG00000039086
Mexicana tetra	MODERN SPECIES	7	ENSAMXG00000019280	ENSAMXG00000019288	rgs5b (ENSAMXG00000043798)	ENSAMXG00000019298	rgs18 (ENSAMXG00000019306)	RGS1 (ENSAMXG00000037976)	rgs13 (ENSAMXG00000039869)	RGS2 (ENSAMXG00000043625)	ENSAMXG00000036895	blvra (ENSAMXG00000019321)	wdr48b (ENSAMXG00000019327)	ebi3 (ENSAMXG00000032252)	odf3l2a (ENSAMXG00000019334)	crlf1a (ENSAMXG00000019340) #29	keap1a (ENSAMXG00000019344)	zgc:110158 (ENSAMXG00000019347) #22	ZNF622 (ENSAMXG00000019355)	d2hgdh (ENSAMXG00000019359)	acvr1l (ENSAMXG00000019362)	otomp (ENSAMXG00000033025)	rnf220a (ENSAMXG00000012286)	ENSAMXG00000039871	ENSAMXG00000033296	KLF2 (ENSAMXG00000030891)	slc6a9 (ENSAMXG00000012229)	ENSAMXG00000012210	zgc:113531 (ENSAMXG00000035946)	b4galt2 (ENSAMXG00000012181)	atp6v0b (ENSAMXG00000034647)	ENSAMXG00000030752	ENSAMXG00000039213
Osteoglossiformes	ANCESTRAL SPECIES	21	ENSGT01030000234519.e.a.a.b.b.b.b	ENSGT01030000234519.e.a.a.b.b.a.b	ENSGT01030000234519.e.a.a.b.b.b.a	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004.c	ENSGT00530000063615.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.a.a #29	ENSGT00390000008279.b.k #30	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808.i	ENSGT00940000157066.p	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.a	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	24	plpp2b (ENSSFOG00015027250)	mier2 (ENSSFOG00015002975)	s1pr3a (ENSSFOG00015002984)	shda (ENSSFOG00015002989)	yju2 (ENSSFOG00015026835)	ENSSFOG00015003035	ENSSFOG00015024963	shc2 (ENSSFOG00015025786)	odf3l2b (ENSSFOG00015003153)	ENSSFOG00015003170	ENSSFOG00015003217	ENSSFOG00015003226	rex1bd (ENSSFOG00015003250)	CRLF1 (ENSSFOG00015024427) #29	tmem59l (ENSSFOG00015003267) #30	ssbp4 (ENSSFOG00015029509) #22	fkbp8 (ENSSFOG00015003342) #25	ell (ENSSFOG00015003353) #24	ENSSFOG00015027631	DOT1L (ENSSFOG00015003432)	amh (ENSSFOG00015003441)	oaz1a (ENSSFOG00015003448)	ENSSFOG00015003472	org (ENSSFOG00015003484)	lingo3a (ENSSFOG00015026385)	nfil3-4 (ENSSFOG00015027003)	ENSSFOG00015003531	ENSSFOG00015003587	foxq2 (ENSSFOG00015003608)	pias4a (ENSSFOG00015028592)	map2k2a (ENSSFOG00015032068)
Asian bonytongue	MODERN SPECIES	17	ENSSFOG00015011625	gna11b (ENSSFOG00015011582)	ENSSFOG00015011415	ENSSFOG00015011440	ENSSFOG00015032268	PLPP2 (ENSSFOG00015011376)	ENSSFOG00015032168	SHD (ENSSFOG00015026360)	ENSSFOG00015011303	ebi3 (ENSSFOG00015011295)	cks2 (ENSSFOG00015011286)	odf3l2a (ENSSFOG00015011278)	crlf1a (ENSSFOG00015011257) #29	ENSSFOG00015011186 #30	keap1a (ENSSFOG00015025073)	zgc:110158 (ENSSFOG00015011080) #22	ENSSFOG00015031291	ELL (ENSSFOG00015026649) #24	ISYNA1 (ENSSFOG00015010978) #23	plekhj1 (ENSSFOG00015025381)	sf3a2 (ENSSFOG00015033304)	oaz1a (ENSSFOG00015010906)	ENSSFOG00015025090	ENSSFOG00015030242	ONECUT3 (ENSSFOG00015024703)	pias4b (ENSSFOG00015010810)	MAP2K2 (ENSSFOG00015028124)	ENSSFOG00015029384	tcf3a (ENSSFOG00015010645)	ENSSFOG00015010547	eef2b (ENSSFOG00015010432)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	4	tle2a (ENSPKIG00000016898)	ENSPKIG00000016984	plpp2b (ENSPKIG00000017075)	mier2 (ENSPKIG00000017115)	s1pr3a (ENSPKIG00000017142)	yju2 (ENSPKIG00000017199)	ENSPKIG00000017374	shc2 (ENSPKIG00000017414)	odf3l2b (ENSPKIG00000017453)	ENSPKIG00000017483	ENSPKIG00000017506	ENSPKIG00000017579	rex1bd (ENSPKIG00000017606)	CRLF1 (ENSPKIG00000017622) #29	tmem59l (ENSPKIG00000017655) #30	ssbp4 (ENSPKIG00000017686) #22	ENSPKIG00000017738	fkbp8 (ENSPKIG00000017759) #25	ell (ENSPKIG00000017796) #24	ISYNA1 (ENSPKIG00000017847) #23	DOT1L (ENSPKIG00000017910)	amh (ENSPKIG00000017996)	oaz1a (ENSPKIG00000018015)	ENSPKIG00000018026	org (ENSPKIG00000018053)	lingo3a (ENSPKIG00000018082)	nfil3-4 (ENSPKIG00000018095)	ENSPKIG00000018103	ATP8B3 (ENSPKIG00000018165)	ENSPKIG00000018283	foxq2 (ENSPKIG00000018304)
P. kingsleyae	MODERN SPECIES	57	ENSPKIG00000008606	ENSPKIG00000008653	ENSPKIG00000008699	PLPP2 (ENSPKIG00000008764)	ENSPKIG00000008806	theg (ENSPKIG00000008849)	shda (ENSPKIG00000008906)	ENSPKIG00000008963	ENSPKIG00000008984	ebi3 (ENSPKIG00000009019)	cks2 (ENSPKIG00000009044)	odf3l2a (ENSPKIG00000009061)	crlf1a (ENSPKIG00000009089) #29	ENSPKIG00000009120 #30	keap1a (ENSPKIG00000009154)	zgc:110158 (ENSPKIG00000009240) #22	ENSPKIG00000009391	ELL (ENSPKIG00000009417) #24	tpgs1 (ENSPKIG00000009451)	plekhj1 (ENSPKIG00000009464)	sf3a2 (ENSPKIG00000009487)	oaz1a (ENSPKIG00000009506)	PIP5K1C (ENSPKIG00000009530)	gpx4b (ENSPKIG00000009572)	polr2eb (ENSPKIG00000009607)	ARHGAP45 (ENSPKIG00000009645)	SBNO2 (ENSPKIG00000009707)	tm6sf2a (ENSPKIG00000009889)	ENSPKIG00000009939	borcs8 (ENSPKIG00000010007)	ENSPKIG00000010038
Osteoglossocephalai	ANCESTRAL SPECIES	131	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.b.a.b	ENSGT01030000234519.e.a.a.b.b.b	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a	ENSGT00940000159004	ENSGT00940000159237	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00390000018395 #23	ENSGT00950000183049.C.a.a #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337
Clupeocephala	ANCESTRAL SPECIES	125					ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT01030000234519.e.a.a.b.a.a.b.b	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00390000018395 #23	ENSGT00500000045074	ENSGT00390000005235	ENSGT00720000108823	ENSGT00410000028808	ENSGT00940000164500.a	ENSGT00950000183103.d.b.a.a	ENSGT00940000157036.f	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000157036.e.a
Euteleosteomorpha	ANCESTRAL SPECIES	485																ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24
Acanthomorphata	ANCESTRAL SPECIES	135	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Pinecone sodierfish	MODERN SPECIES	14	PLPP2 (ENSMMDG00005020133)	ENSMMDG00005020135	gna11b (ENSMMDG00005020142)	ENSMMDG00005020160	ISYNA1 (ENSMMDG00005020171) #23	PDCD10 (ENSMMDG00005020200)	ENSMMDG00005020203	SLITRK3 (ENSMMDG00005020206)	NRDC (ENSMMDG00005020353)	FAM163A (ENSMMDG00005023053)	ENSMMDG00005023057	ebi3 (ENSMMDG00005023061)	odf3l2a (ENSMMDG00005023063)	crlf1a (ENSMMDG00005023064) #29	keap1a (ENSMMDG00005023068)	SSBP4 (ENSMMDG00005023090) #22	ENSMMDG00005023093	ENSMMDG00005023097 #24	d2hgdh (ENSMMDG00005023110)	acvr1l (ENSMMDG00005023119)	otomp (ENSMMDG00005023121)	hs6st1b (ENSMMDG00005023123)	uggt1 (ENSMMDG00005023163)	ENSMMDG00005023493	ola1 (ENSMMDG00005007174)	TRA2B (ENSMMDG00005007194)	ENSMMDG00005007197	ENSMMDG00005007208	zgc:112416 (ENSMMDG00005007217)	atg9a (ENSMMDG00005007226)	ENSMMDG00005007261
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Tiger tail seahorse	MODERN SPECIES	204	ENSHCOG00000016299	ENSHCOG00000016276	gna11b (ENSHCOG00000016239)	ENSHCOG00000016213	tpgs1 (ENSHCOG00000016205)	ISYNA1 (ENSHCOG00000016192) #23	pdcd10a (ENSHCOG00000016136)	SLITRK3 (ENSHCOG00000016103)	NRDC (ENSHCOG00000016077)	FAM163A (ENSHCOG00000016036)	ENSHCOG00000016031	odf3l2a (ENSHCOG00000016019)	crlf1a (ENSHCOG00000016009) #29	keap1a (ENSHCOG00000015989)	ENSHCOG00000015972 ##22	SSBP4 (ENSHCOG00000015968) #22	ENSHCOG00000015944 #24	d2hgdh (ENSHCOG00000015937)	acvr1l (ENSHCOG00000015917)	otomp (ENSHCOG00000015908)	ENSHCOG00000015890	SHPRH (ENSHCOG00000000443)	SHD (ENSHCOG00000000441)	yju2 (ENSHCOG00000015785)	CARTPT (ENSHCOG00000015746)	MAP1S (ENSHCOG00000015706)	GADD45B (ENSHCOG00000015442)	gng7 (ENSHCOG00000015428)	diras1b (ENSHCOG00000015419)	ENSHCOG00000015412	ENSHCOG00000015398
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Cyprinodontiformes	ANCESTRAL SPECIES	21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Aplocheiloidei	ANCESTRAL SPECIES	15	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.k
Mangrove rivulus	MODERN SPECIES	1	ENSKMAG00000013522	tpgs1 (ENSKMAG00000013512)	ISYNA1 (ENSKMAG00000013477) #23	pdcd10a (ENSKMAG00000013442)	ENSKMAG00000013408	ENSKMAG00000013377	ENSKMAG00000013350	SLITRK3 (ENSKMAG00000013297)	NRDC (ENSKMAG00000013225)	FAM163A (ENSKMAG00000013206)	ENSKMAG00000013185	ebi3 (ENSKMAG00000013174)	odf3l2a (ENSKMAG00000013139)	crlf1a (ENSKMAG00000013097) #29	keap1a (ENSKMAG00000013048)	ENSKMAG00000012923 #22	ELL (ENSKMAG00000012864) #24	d2hgdh (ENSKMAG00000012828)	acvr1l (ENSKMAG00000012798)	otomp (ENSKMAG00000012763)	hs6st1b (ENSKMAG00000012735)	uggt1 (ENSKMAG00000012658)	ENSKMAG00000012621	ola1 (ENSKMAG00000012576)	TRA2B (ENSKMAG00000012538)	pcnt (ENSKMAG00000012283)	atg9a (ENSKMAG00000012147)	ENSKMAG00000012112	ENSKMAG00000012048	ENSKMAG00000012027	sumo3b (ENSKMAG00000012006)
Turquoise killifish	MODERN SPECIES	1625	ENSNFUG00015020039	CABZ01085657.1 (ENSNFUG00015020034)	TPGS1 (ENSNFUG00015020029)	ISYNA1 (ENSNFUG00015020013) #23	PDCD10B (ENSNFUG00015019977)	ENSNFUG00015019961	SLITRK3 (ENSNFUG00015019956)	ENSNFUG00015019951	NRD1 (ENSNFUG00015017003)	FAM163A (ENSNFUG00015016816)	ENSNFUG00015016809	EBI3 (ENSNFUG00015016805)	odf3l2a (ENSNFUG00015016798)	crlf1a (ENSNFUG00015016783) #29	KEAP1A (ENSNFUG00015016588)	SSBP4 (ENSNFUG00015015082) #22	ENSNFUG00015014963	ELL (ENSNFUG00015014955) #24	D2HGDH (ENSNFUG00015014845)	ACVR1L (ENSNFUG00015014779)	OTOMP (ENSNFUG00015014755)	hs6st1b (ENSNFUG00015014626)	uggt1 (ENSNFUG00015014086)	ENSNFUG00015025387	ola1 (ENSNFUG00015025386)	TRA2B (ENSNFUG00015025384)	SENP2 (ENSNFUG00015025383)	ATG9A (ENSNFUG00015025378)	ifi44c1 (ENSNFUG00015025375)	GADD45BB (ENSNFUG00015025373)	GNG7 (ENSNFUG00015025372)
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
NAME_4	ANCESTRAL SPECIES	160								ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Mummichog	MODERN SPECIES	2458																ENSFHEG00000008704 #22	ENSFHEG00000008734	ENSFHEG00000008712 #24	d2hgdh (ENSFHEG00000008746)	acvr1l (ENSFHEG00000008759)	otomp (ENSFHEG00000008795)	hs6st1b (ENSFHEG00000008842)	uggt1 (ENSFHEG00000008962)	ENSFHEG00000008973	ola1 (ENSFHEG00000009030)	TRA2B (ENSFHEG00000009235)	ENSFHEG00000009260	ENSFHEG00000009269	pcnt (ENSFHEG00000009485)	tbce (ENSFHEG00000000220)	atg9a (ENSFHEG00000009644)
Sheepshead minnow	MODERN SPECIES	515							si:dkey-56i24.1 (ENSCVAG00000016194)	SLITRK3 (ENSCVAG00000016229)	NRDC (ENSCVAG00000016290)	fam163ab (ENSCVAG00000016320)	ENSCVAG00000016353	ebi3 (ENSCVAG00000016369)	odf3l2a (ENSCVAG00000016388)	crlf1a (ENSCVAG00000016426) #29	keap1a (ENSCVAG00000016516)	SSBP4 (ENSCVAG00000016706) #22	ENSCVAG00000016765 #24	d2hgdh (ENSCVAG00000016817)	acvr1l (ENSCVAG00000016895)	otomp (ENSCVAG00000016929)
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p.f	ENSGT00530000064359.c.b.p.e	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Poecilia	ANCESTRAL SPECIES	10	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p.f	ENSGT00530000064359.c.b.p.e.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
NAME_6	ANCESTRAL SPECIES	3	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p.e.a	ENSGT00530000064359.c.b.p.e.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Amazon molly	MODERN SPECIES	260																SSBP4 (ENSPFOG00000016754) #22	ENSPFOG00000016740	ENSPFOG00000016714 #24	d2hgdh (ENSPFOG00000016660)	acvr1l (ENSPFOG00000016625)	otomp (ENSPFOG00000016598)	hs6st1b (ENSPFOG00000016587)	uggt1 (ENSPFOG00000016300)	ENSPFOG00000016261	ola1 (ENSPFOG00000016213)	TRA2B (ENSPFOG00000016208)	ENSPFOG00000016205	pcnt (ENSPFOG00000016128)	atg9a (ENSPFOG00000016076)	ENSPFOG00000015993	ENSPFOG00000015983
Sailfin molly	MODERN SPECIES	553														crlf1a (ENSPLAG00000006515) #29	keap1a (ENSPLAG00000006565)	SSBP4 (ENSPLAG00000006593) #22	ENSPLAG00000006608	ENSPLAG00000006616 #24	d2hgdh (ENSPLAG00000006655)	acvr1l (ENSPLAG00000006717)	otomp (ENSPLAG00000006763)	hs6st1b (ENSPLAG00000006790)
Platyfish	MODERN SPECIES	10	tpgs1 (ENSXMAG00000023659)	ISYNA1 (ENSXMAG00000010138) #23	pdcd10a (ENSXMAG00000010125)	ENSXMAG00000021791	ENSXMAG00000027792	ENSXMAG00000018554	ENSXMAG00000024177	SLITRK3 (ENSXMAG00000025152)	NRDC (ENSXMAG00000010081)	FAM163A (ENSXMAG00000026439)	ENSXMAG00000021978	ebi3 (ENSXMAG00000006449)	odf3l2a (ENSXMAG00000023708)	crlf1a (ENSXMAG00000010072) #29	keap1a (ENSXMAG00000010053)	SSBP4 (ENSXMAG00000025419) #22	ENSXMAG00000010020	ENSXMAG00000009984 #24	acvr1l (ENSXMAG00000024794)	otomp (ENSXMAG00000009978)	hs6st1b (ENSXMAG00000009977)	uggt1 (ENSXMAG00000009880)	ENSXMAG00000009872	ola1 (ENSXMAG00000009840)	TRA2B (ENSXMAG00000009835)	ENSXMAG00000009832	pcnt (ENSXMAG00000009826)	atg9a (ENSXMAG00000009801)	ENSXMAG00000009757	ENSXMAG00000009754	sumo3b (ENSXMAG00000026869)
Oryzias	ANCESTRAL SPECIES	3	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p.g.a.a	ENSGT00530000064359.c.b.p.g.a.b	ENSGT00530000064359.c.b.p.g.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.k
Oryzias_a	ANCESTRAL SPECIES	11	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p.g.a.a	ENSGT00530000064359.c.b.p.g.a.b	ENSGT00530000064359.c.b.p.g.b.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.k
Chinese medaka	MODERN SPECIES	21	ENSOSIG00000002606	tpgs1 (ENSOSIG00000002617)	ENSOSIG00000002627	ISYNA1 (ENSOSIG00000002649) #23	pdcd10b (ENSOSIG00000003038)	ENSOSIG00000003052	ENSOSIG00000003058	SLITRK3 (ENSOSIG00000003064)	NRDC (ENSOSIG00000003121)	ENSOSIG00000004691	ENSOSIG00000004694	ebi3 (ENSOSIG00000004696)	odf3l2a (ENSOSIG00000004701)	crlf1a (ENSOSIG00000004712) #29	keap1a (ENSOSIG00000004741)	ENSOSIG00000004828 #22	ELL (ENSOSIG00000006770) #24	d2hgdh (ENSOSIG00000006775)	acvr1l (ENSOSIG00000006777)	otomp (ENSOSIG00000006781)	hs6st1b (ENSOSIG00000006785)	uggt1 (ENSOSIG00000006789)	ola1 (ENSOSIG00000006873)	ENSOSIG00000006892	ENSOSIG00000006900	atg9a (ENSOSIG00000006904)	ENSOSIG00000006912	ENSOSIG00000007230	sumo3a (ENSOSIG00000007235)	TSPEAR (ENSOSIG00000007399)	ENSOSIG00000007401
Japanese Medaka HdrR	MODERN SPECIES	14	tpgs1 (ENSORLG00000014098)	ISYNA1 (ENSORLG00000014091) #23	pdcd10a (ENSORLG00000022553)	ENSORLG00000025778	ENSORLG00000027988	ENSORLG00000014068	ENSORLG00000025053	ENSORLG00000014064	NRDC (ENSORLG00000014051)	ENSORLG00000022510	ENSORLG00000014028	ebi3 (ENSORLG00000023498)	odf3l2a (ENSORLG00000014016)	crlf1a (ENSORLG00000014003) #29	keap1a (ENSORLG00000013993)	ENSORLG00000013936 #22	ENSORLG00000013871 #24	d2hgdh (ENSORLG00000013844)	otomp (ENSORLG00000013815)	acvr1l (ENSORLG00000013834)	ENSORLG00000027515	hs6st1b (ENSORLG00000013805)	uggt1 (ENSORLG00000013749)	ENSORLG00000013706	ola1 (ENSORLG00000013788)	ENSORLG00000013780	ENSORLG00000013689	pcnt (ENSORLG00000013666)	atg9a (ENSORLG00000013642)	ENSORLG00000027840	ENSORLG00000013589
Oryzias_b	ANCESTRAL SPECIES	12	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p.g.a.a	ENSGT00530000064359.c.b.p.g.a.b.a	ENSGT00530000064359.c.b.p.g.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.u.a
Indian medaka	MODERN SPECIES		pdcd10a (ENSOMEG00000011804)	ENSOMEG00000011826	ENSOMEG00000011854	ENSOMEG00000011860	ENSOMEG00000011886	ENSOMEG00000011921	SLITRK3 (ENSOMEG00000011935)	NRDC (ENSOMEG00000012069)	ENSOMEG00000012098	ENSOMEG00000012110	ebi3 (ENSOMEG00000012120)	odf3l2a (ENSOMEG00000012136)	crlf1a (ENSOMEG00000012181) #29	ENSOMEG00000012198	ENSOMEG00000012212	ENSOMEG00000012274 #22	ENSOMEG00000012322 #24	d2hgdh (ENSOMEG00000012390)	acvr1l (ENSOMEG00000012435)	otomp (ENSOMEG00000012488)	ENSOMEG00000012518	hs6st1b (ENSOMEG00000001025)	ENSOMEG00000012565	ENSOMEG00000012606	ENSOMEG00000012623	ENSOMEG00000012714	ola1 (ENSOMEG00000012796)	ENSOMEG00000012826	ENSOMEG00000012852	pcnt (ENSOMEG00000013043)	atg9a (ENSOMEG00000013216)
Javanese ricefish	MODERN SPECIES	14	gna11b (ENSOJAG00000014571)	ENSOJAG00000014659	tpgs1 (ENSOJAG00000014704)	ISYNA1 (ENSOJAG00000014717) #23	pdcd10a (ENSOJAG00000014883)	ENSOJAG00000014997	ENSOJAG00000015013	SLITRK3 (ENSOJAG00000015023)	NRDC (ENSOJAG00000015160)	ENSOJAG00000017239	ENSOJAG00000017245	ebi3 (ENSOJAG00000017263)	odf3l2a (ENSOJAG00000017270)	crlf1a (ENSOJAG00000017298) #29	keap1a (ENSOJAG00000017350)	ENSOJAG00000017528 #22	ENSOJAG00000018438 #24	d2hgdh (ENSOJAG00000018465)	acvr1l (ENSOJAG00000018629)	otomp (ENSOJAG00000018670)	ENSOJAG00000018673	hs6st1b (ENSOJAG00000018694)	uggt1 (ENSOJAG00000018799)	ENSOJAG00000020238	ola1 (ENSOJAG00000020246)	ENSOJAG00000020271	ENSOJAG00000020281	atg9a (ENSOJAG00000020353)	ENSOJAG00000020499	ENSOJAG00000020911	ENSOJAG00000020917
Ovalentaria_B	ANCESTRAL SPECIES	18	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Pomacentridae	ANCESTRAL SPECIES	19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Pomacentridae_A	ANCESTRAL SPECIES	19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b.a	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Amphiprion	ANCESTRAL SPECIES	12	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b.a	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Orange clownfish	MODERN SPECIES	9	ENSAPEG00000013253	gna11b (ENSAPEG00000013281)	ENSAPEG00000013315	tpgs1 (ENSAPEG00000013321)	ISYNA1 (ENSAPEG00000013327) #23	pdcd10a (ENSAPEG00000013367)	si:dkey-56i24.1 (ENSAPEG00000013397)	SLITRK3 (ENSAPEG00000013403)	NRDC (ENSAPEG00000013447)	FAM163A (ENSAPEG00000013635)	ENSAPEG00000013644	ebi3 (ENSAPEG00000013656)	odf3l2a (ENSAPEG00000013678)	crlf1a (ENSAPEG00000013716) #29	keap1a (ENSAPEG00000013761)	SSBP4 (ENSAPEG00000013777) #22	ENSAPEG00000013844	ENSAPEG00000013891 #24	d2hgdh (ENSAPEG00000013915)	acvr1l (ENSAPEG00000013964)	otomp (ENSAPEG00000013993)	hs6st1b (ENSAPEG00000014035)	uggt1 (ENSAPEG00000014074)	ENSAPEG00000014249	ola1 (ENSAPEG00000014283)	TRA2B (ENSAPEG00000014341)	ENSAPEG00000014362	ENSAPEG00000014411	ENSAPEG00000014637	atg9a (ENSAPEG00000014643)	ENSAPEG00000014709
Clown anemonefish	MODERN SPECIES	2273											ENSAOCG00000016080	ebi3 (ENSAOCG00000016016)	odf3l2a (ENSAOCG00000015989)	crlf1a (ENSAOCG00000015961) #29	keap1a (ENSAOCG00000015925)	SSBP4 (ENSAOCG00000015875) #22	ENSAOCG00000015698	ENSAOCG00000015675 #24
Spiny chromis	MODERN SPECIES	9						pdcd10a (ENSAPOG00000021329)	si:dkey-56i24.1 (ENSAPOG00000021350)	SLITRK3 (ENSAPOG00000021371)	NRDC (ENSAPOG00000021423)	ENSAPOG00000021444	ENSAPOG00000021468	ebi3 (ENSAPOG00000021499)	odf3l2a (ENSAPOG00000021531)	crlf1a (ENSAPOG00000021611) #29	keap1a (ENSAPOG00000021664)	SSBP4 (ENSAPOG00000021699) #22	ENSAPOG00000021714	ENSAPOG00000021737 #24	d2hgdh (ENSAPOG00000021787)	acvr1l (ENSAPOG00000021807)	otomp (ENSAPOG00000021844)	hs6st1b (ENSAPOG00000021875)	uggt1 (ENSAPOG00000021954)	bri3bp (ENSAPOG00000021988)	wdr31 (ENSAPOG00000022023)	ENSAPOG00000022062	mibp2 (ENSAPOG00000022093)	GNA14 (ENSAPOG00000022114)	vps13a (ENSAPOG00000023260)	ENSAPOG00000023325	FOXB2 (ENSAPOG00000023340)
Bicolor damselfish	MODERN SPECIES	1000										ENSSPAG00000015605	ENSSPAG00000015622	ebi3 (ENSSPAG00000015640)	odf3l2a (ENSSPAG00000015653)	crlf1a (ENSSPAG00000015673) #29	keap1a (ENSSPAG00000015722)	ENSSPAG00000015748 #22	ENSSPAG00000015786	ENSSPAG00000015797	ENSSPAG00000015813 #24	d2hgdh (ENSSPAG00000015833)	acvr1l (ENSSPAG00000015870)	otomp (ENSSPAG00000015888)
Cichlidae	ANCESTRAL SPECIES	22	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Midas cichlid	MODERN SPECIES	231	gna11b (ENSACIG00000017855)	ENSACIG00000017845	tpgs1 (ENSACIG00000017834)	ISYNA1 (ENSACIG00000017814) #23	pdcd10a (ENSACIG00000017807)	ENSACIG00000017785	ENSACIG00000017770	SLITRK3 (ENSACIG00000017747)	NRDC (ENSACIG00000017430)	FAM163A (ENSACIG00000017386)	ENSACIG00000017320	ebi3 (ENSACIG00000017289)	odf3l2a (ENSACIG00000017275)	crlf1a (ENSACIG00000017261) #29	keap1a (ENSACIG00000017236)	SSBP4 (ENSACIG00000017215) #22	ENSACIG00000017202	ENSACIG00000017088 #24	d2hgdh (ENSACIG00000017057)	acvr1l (ENSACIG00000016967)	otomp (ENSACIG00000016937)	hs6st1b (ENSACIG00000016921)	uggt1 (ENSACIG00000016835)	ENSACIG00000016803	ola1 (ENSACIG00000016766)	TRA2B (ENSACIG00000016739)	ENSACIG00000016713	pcnt (ENSACIG00000016414)	ENSACIG00000016378	atg9a (ENSACIG00000016340)	ENSACIG00000016252
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b.a	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT01100000264078.a.a	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Nile tilapia	MODERN SPECIES	10	ISYNA1 (ENSONIG00000001155) #23	pdcd10a (ENSONIG00000001157)	ENSONIG00000001160	ENSONIG00000029408	ENSONIG00000037991	ENSONIG00000038946	ENSONIG00000027821	SLITRK3 (ENSONIG00000001162)	NRDC (ENSONIG00000001167)	FAM163A (ENSONIG00000031507)	ENSONIG00000001192	ENSONIG00000001198	odf3l2a (ENSONIG00000001196)	crlf1a (ENSONIG00000001204) #29	keap1a (ENSONIG00000001205)	ENSONIG00000001215 #22	ENSONIG00000031220	ENSONIG00000001226 #24	d2hgdh (ENSONIG00000001232)	acvr1l (ENSONIG00000001235)	otomp (ENSONIG00000001240)	ENSONIG00000034367	hs6st1b (ENSONIG00000001241)	uggt1 (ENSONIG00000001242)	ENSONIG00000001262	ola1 (ENSONIG00000001265)	TRA2B (ENSONIG00000001274)	ENSONIG00000034409	ENSONIG00000039936	atg9a (ENSONIG00000001285)	ENSONIG00000001298
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b.a	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT01100000264078.a.a	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b.a	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Burton s mouthbrooder	MODERN SPECIES	438							ENSHBUG00000005499	SLITRK3 (ENSHBUG00000005510)	NRDC (ENSHBUG00000005527)	ENSHBUG00000005544	ENSHBUG00000005569	ebi3 (ENSHBUG00000005596)	odf3l2a (ENSHBUG00000005606)	crlf1a (ENSHBUG00000005654) #29	keap1a (ENSHBUG00000005682)	SSBP4 (ENSHBUG00000005735) #22	ENSHBUG00000005755	ENSHBUG00000005799 #24	acvr1l (ENSHBUG00000005813)	otomp (ENSHBUG00000005856)	hs6st1b (ENSHBUG00000005898)	uggt1 (ENSHBUG00000005999)	SP3 (ENSHBUG00000006036)	ola1 (ENSHBUG00000006078)	TRA2B (ENSHBUG00000006118)	ENSHBUG00000006139	pcnt (ENSHBUG00000006340)	atg9a (ENSHBUG00000006428)	ENSHBUG00000006551	ENSHBUG00000006581	ENSHBUG00000006596
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b.a.a.a	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b.a.a.a	ENSGT00530000064359.c.b.o.a.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Eastern happy	MODERN SPECIES	10	pdcd10a (ENSACLG00000010056)	ENSACLG00000010068	ENSACLG00000010079	ENSACLG00000010080	ENSACLG00000010084	ENSACLG00000010100	SLITRK3 (ENSACLG00000010115)	NRDC (ENSACLG00000010437)	ENSACLG00000010507	ENSACLG00000010514	ENSACLG00000010523	ebi3 (ENSACLG00000010537)	odf3l2a (ENSACLG00000010595)	crlf1a (ENSACLG00000010610) #29	keap1a (ENSACLG00000010637)	ENSACLG00000010660 #22	ENSACLG00000010684	ENSACLG00000010689 #24	d2hgdh (ENSACLG00000010697)	acvr1l (ENSACLG00000010712)	otomp (ENSACLG00000010733)	hs6st1b (ENSACLG00000010812)	uggt1 (ENSACLG00000010862)	ENSACLG00000011044	ola1 (ENSACLG00000011067)	TRA2B (ENSACLG00000011095)	ENSACLG00000011110	pcnt (ENSACLG00000011373)	atg9a (ENSACLG00000011454)	ENSACLG00000011479	ENSACLG00000011512
Zebra mbuna	MODERN SPECIES	1101	gna11b (ENSMZEG00005000449)	ENSMZEG00005000492	tpgs1 (ENSMZEG00005000497)	ISYNA1 (ENSMZEG00005000512) #23	pdcd10a (ENSMZEG00005000561)	ENSMZEG00005000602	ENSMZEG00005000616	SLITRK3 (ENSMZEG00005000625)	NRDC (ENSMZEG00005000657)	ENSMZEG00005000678	ENSMZEG00005000686	ebi3 (ENSMZEG00005000696)	odf3l2a (ENSMZEG00005000732)	crlf1a (ENSMZEG00005000757) #29	keap1a (ENSMZEG00005000769)	ENSMZEG00005000818 #22	ENSMZEG00005000836	ENSMZEG00005000851 #24	d2hgdh (ENSMZEG00005000872)	acvr1l (ENSMZEG00005000913)	otomp (ENSMZEG00005000963)	hs6st1b (ENSMZEG00005000997)	uggt1 (ENSMZEG00005001047)	ENSMZEG00005001190	ola1 (ENSMZEG00005001203)	TRA2B (ENSMZEG00005001232)	ENSMZEG00005001241	pcnt (ENSMZEG00005001272)	atg9a (ENSMZEG00005001449)	ENSMZEG00005001497	ENSMZEG00005001609
P. nyererei	MODERN SPECIES	305	ENSPNYG00000013533	tpgs1 (ENSPNYG00000013558)	ISYNA1 (ENSPNYG00000013569) #23	pdcd10a (ENSPNYG00000013601)	ENSPNYG00000013631	ENSPNYG00000013669	SLITRK3 (ENSPNYG00000013708)	NRDC (ENSPNYG00000013827)	ENSPNYG00000014282	ENSPNYG00000014310	ENSPNYG00000014393	ebi3 (ENSPNYG00000014420)	odf3l2a (ENSPNYG00000014438)	crlf1a (ENSPNYG00000014455) #29	keap1a (ENSPNYG00000014474)	ENSPNYG00000014520 #22	ENSPNYG00000014566	ENSPNYG00000014576 #24	d2hgdh (ENSPNYG00000014600)	acvr1l (ENSPNYG00000014634)	otomp (ENSPNYG00000014659)	hs6st1b (ENSPNYG00000014686)	uggt1 (ENSPNYG00000014757)	ENSPNYG00000014919	ola1 (ENSPNYG00000014943)	TRA2B (ENSPNYG00000014955)	ENSPNYG00000014980	pcnt (ENSPNYG00000015024)	atg9a (ENSPNYG00000015233)	ENSPNYG00000015305	ENSPNYG00000015393
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Carangaria	ANCESTRAL SPECIES	10	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Barramundi perch	MODERN SPECIES	99	ENSLCAG00010014593	gna11b (ENSLCAG00010014609)	ENSLCAG00010014660	tpgs1 (ENSLCAG00010014664)	ISYNA1 (ENSLCAG00010014670) #23	PDCD10 (ENSLCAG00010014688)	si:dkey-56i24.1 (ENSLCAG00010014718)	SLITRK3 (ENSLCAG00010014756)	NRDC (ENSLCAG00010014985)	FAM163A (ENSLCAG00010015727)	ENSLCAG00010015735	ENSLCAG00010015765	odf3l2a (ENSLCAG00010015775)	crlf1a (ENSLCAG00010015780) #29	keap1a (ENSLCAG00010015791)	ENSLCAG00010015816 #22	ENSLCAG00010015829	ENSLCAG00010015830	ENSLCAG00010015834 #24	d2hgdh (ENSLCAG00010015841)	acvr1l (ENSLCAG00010015849)	otomp (ENSLCAG00010015857)	hs6st1b (ENSLCAG00010015864)	uggt1 (ENSLCAG00010015970)	ENSLCAG00010016383	ola1 (ENSLCAG00010016395)	TRA2B (ENSLCAG00010016418)	ENSLCAG00010016424	zgc:112416 (ENSLCAG00010016440)	atg9a (ENSLCAG00010016447)	ENSLCAG00010016502
Seriola	ANCESTRAL SPECIES	3	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Greater amberjack	MODERN SPECIES	62	gna11b (ENSSDUG00000012881)	ENSSDUG00000012928	tpgs1 (ENSSDUG00000012942)	ISYNA1 (ENSSDUG00000012948) #23	pdcd10a (ENSSDUG00000012988)	ENSSDUG00000013024	ENSSDUG00000013066	SLITRK3 (ENSSDUG00000013078)	NRDC (ENSSDUG00000013108)	FAM163A (ENSSDUG00000013155)	ENSSDUG00000013170	ebi3 (ENSSDUG00000013261)	odf3l2a (ENSSDUG00000013302)	crlf1a (ENSSDUG00000013336) #29	keap1a (ENSSDUG00000013386)	ENSSDUG00000013426 #22	ENSSDUG00000013458	ENSSDUG00000013474 #24	d2hgdh (ENSSDUG00000013492)	acvr1l (ENSSDUG00000013523)	otomp (ENSSDUG00000013538)	hs6st1b (ENSSDUG00000013575)	uggt1 (ENSSDUG00000013603)	ENSSDUG00000013686	ola1 (ENSSDUG00000013714)	TRA2B (ENSSDUG00000013749)	ENSSDUG00000013759	pcnt (ENSSDUG00000013810)	zgc:112416 (ENSSDUG00000014069)	atg9a (ENSSDUG00000014164)	ENSSDUG00000014240
Yellowtail amberjack	MODERN SPECIES	3136	gna11b (ENSSLDG00000001118)	ENSSLDG00000001151	ISYNA1 (ENSSLDG00000001158) #23	ENSSLDG00000001206	pdcd10a (ENSSLDG00000001229)	ENSSLDG00000001266	ENSSLDG00000001327	SLITRK3 (ENSSLDG00000001358)	NRDC (ENSSLDG00000001379)	FAM163A (ENSSLDG00000001397)	ENSSLDG00000001403	ebi3 (ENSSLDG00000001416)	odf3l2a (ENSSLDG00000001469)	crlf1a (ENSSLDG00000001488) #29	keap1a (ENSSLDG00000001548)	SSBP4 (ENSSLDG00000001618) #22	ENSSLDG00000001666	ENSSLDG00000001696 #24	d2hgdh (ENSSLDG00000001719)
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Tongue sole	MODERN SPECIES		PLPP2 (ENSCSEG00000005198)	ENSCSEG00000005200	ENSCSEG00000005206	ENSCSEG00000005213	ENSCSEG00000005215	ISYNA1 (ENSCSEG00000005218) #23	pdcd10a (ENSCSEG00000005222)	si:dkey-56i24.1 (ENSCSEG00000005229)	SLITRK3 (ENSCSEG00000005235)	NRDC (ENSCSEG00000005245)	ENSCSEG00000005295	ebi3 (ENSCSEG00000005299)	odf3l2a (ENSCSEG00000005314)	crlf1a (ENSCSEG00000005317) #29	keap1a (ENSCSEG00000005323)	SSBP4 (ENSCSEG00000005331) #22	ENSCSEG00000005338 #24	d2hgdh (ENSCSEG00000005345)	acvr1l (ENSCSEG00000005351)	otomp (ENSCSEG00000005362)	hs6st1b (ENSCSEG00000005379)	uggt1 (ENSCSEG00000005390)	ENSCSEG00000005431	ola1 (ENSCSEG00000005434)	GRM1 (ENSCSEG00000005446)	SHPRH (ENSCSEG00000005452)	ENSCSEG00000005493	fbxo30a (ENSCSEG00000005500)	stx11a (ENSCSEG00000005503)	RPS6KA5 (ENSCSEG00000006322)	hadhab (ENSCSEG00000006477)
Turbot	MODERN SPECIES	8	ENSSMAG00000016980	gna11b (ENSSMAG00000017000)	ENSSMAG00000017001	ENSSMAG00000029682	ENSSMAG00000017008 #23	ENSSMAG00000017048	ENSSMAG00000017082	ENSSMAG00000017098	ENSSMAG00000017108	ENSSMAG00000017231	ENSSMAG00000017235	ebi3 (ENSSMAG00000017254)	odf3l2a (ENSSMAG00000017287)	crlf1a (ENSSMAG00000017309) #29	keap1a (ENSSMAG00000017380)	ENSSMAG00000017406 #22	ENSSMAG00000017441	ENSSMAG00000037066 #24	d2hgdh (ENSSMAG00000017454)	acvr1l (ENSSMAG00000017497)	otomp (ENSSMAG00000017539)	ENSSMAG00000017551	uggt1 (ENSSMAG00000017581)	ENSSMAG00000017630	ENSSMAG00000017661	ENSSMAG00000017702	ENSSMAG00000017717	ENSSMAG00000017741	atg9a (ENSSMAG00000018039)	ENSSMAG00000018133	pttg1ipa (ENSSMAG00000031719)
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000002922	ENSMAMG00000002951	gna11b (ENSMAMG00000003002)	ENSMAMG00000003050	ENSMAMG00000003065	ENSMAMG00000003081 #23	ENSMAMG00000025424	ENSMAMG00000003137	ENSMAMG00000003192	ENSMAMG00000003219	ENSMAMG00000003230	ebi3 (ENSMAMG00000003260)	odf3l2a (ENSMAMG00000003268)	crlf1a (ENSMAMG00000003302) #29	keap1a (ENSMAMG00000003345)	ENSMAMG00000003379 #22	ENSMAMG00000025616	ENSMAMG00000003424 #24	d2hgdh (ENSMAMG00000003448)	acvr1l (ENSMAMG00000003474)	otomp (ENSMAMG00000003486)	ENSMAMG00000003527	uggt1 (ENSMAMG00000003544)	ENSMAMG00000003672	ENSMAMG00000003717	ENSMAMG00000003753	ENSMAMG00000003776	ENSMAMG00000004115	atg9a (ENSMAMG00000004137)	ENSMAMG00000004167	ENSMAMG00000004297
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00950000183049.C.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b
Climbing perch	MODERN SPECIES	13	ENSATEG00000008445 #23	ENSATEG00000008494	ENSATEG00000008521	ENSATEG00000008703	ENSATEG00000008544	ENSATEG00000004181	ENSATEG00000029817	ENSATEG00000008719	ENSATEG00000008762	ENSATEG00000008789	ENSATEG00000008838	ebi3 (ENSATEG00000008848)	odf3l2a (ENSATEG00000008889)	crlf1a (ENSATEG00000008917) #29	keap1a (ENSATEG00000008969)	ENSATEG00000009018 #22	ENSATEG00000009066 #24	d2hgdh (ENSATEG00000028489)	acvr1l (ENSATEG00000009120)	otomp (ENSATEG00000009157)	ENSATEG00000009178	uggt1 (ENSATEG00000009227)	ENSATEG00000009325	ENSATEG00000009394	ENSATEG00000009454	ENSATEG00000009470	ENSATEG00000009914	atg9a (ENSATEG00000009971)	ENSATEG00000010059	ENSATEG00000010197	sumo3a (ENSATEG00000019871)
Eupercaria	ANCESTRAL SPECIES	9	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.k.m.b
Fugu	MODERN SPECIES	11	ENSTRUG00000015936	tpgs1 (ENSTRUG00000015932)	ISYNA1 (ENSTRUG00000015897) #23	pdcd10a (ENSTRUG00000015882)	ENSTRUG00000000562	ENSTRUG00000015881	ENSTRUG00000031712	SLITRK3 (ENSTRUG00000032942)	NRDC (ENSTRUG00000015775)	FAM163A (ENSTRUG00000020348)	ENSTRUG00000021690	ebi3 (ENSTRUG00000015744)	odf3l2a (ENSTRUG00000015738)	crlf1a (ENSTRUG00000015730) #29	keap1a (ENSTRUG00000015644)	SSBP4 (ENSTRUG00000015567) #22	ENSTRUG00000015535 #24	ENSTRUG00000026706 #24	d2hgdh (ENSTRUG00000015514)	acvr1l (ENSTRUG00000015474)	otomp (ENSTRUG00000015460)	hs6st1b (ENSTRUG00000015423)	uggt1 (ENSTRUG00000015281)	ENSTRUG00000015246	ola1 (ENSTRUG00000015215)	TRA2B (ENSTRUG00000015168)	ENSTRUG00000024268	pcnt (ENSTRUG00000029342)	atg9a (ENSTRUG00000015086)	ENSTRUG00000025356	ENSTRUG00000030769
Tetraodon	MODERN SPECIES	1	yju2 (ENSTNIG00000017189)	SHD (ENSTNIG00000017190)	PLPP2 (ENSTNIG00000017191)	gna11b (ENSTNIG00000017192)	tpgs1 (ENSTNIG00000017193)	ISYNA1 (ENSTNIG00000017194) #23	pdcd10a (ENSTNIG00000017195)	si:dkey-56i24.1 (ENSTNIG00000017196)	SLITRK3 (ENSTNIG00000017197)	NRDC (ENSTNIG00000017198)	ENSTNIG00000017199	ebi3 (ENSTNIG00000001785)	odf3l2a (ENSTNIG00000017200)	crlf1a (ENSTNIG00000001783) #29	keap1a (ENSTNIG00000017201)	SSBP4 (ENSTNIG00000017202) #22	ENSTNIG00000017203 #24	d2hgdh (ENSTNIG00000017204)	acvr1l (ENSTNIG00000002260)	otomp (ENSTNIG00000017205)	hs6st1b (ENSTNIG00000017206)	uggt1 (ENSTNIG00000017207)	ENSTNIG00000017208	ola1 (ENSTNIG00000017209)	TRA2B (ENSTNIG00000017210)	ENSTNIG00000017211	atg9a (ENSTNIG00000001749)	ENSTNIG00000017212	ENSTNIG00000017213	ENSTNIG00000017214	TSPEAR (ENSTNIG00000017215)
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Ballan wrasse	MODERN SPECIES	452								ENSLBEG00000003808	SLITRK3 (ENSLBEG00000003854)	NRDC (ENSLBEG00000003891)	ENSLBEG00000003945	ebi3 (ENSLBEG00000003969)	odf3l2a (ENSLBEG00000003992)	crlf1a (ENSLBEG00000004026) #29	keap1a (ENSLBEG00000004094)	ENSLBEG00000004171 #22	ENSLBEG00000004195 ##22	GPR65 (ENSLBEG00000004220)	BDKRB2 (ENSLBEG00000004250)	bdkrb1 (ENSLBEG00000004259)	BDKRB2 (ENSLBEG00000004280)	C14orf132 (ENSLBEG00000004292)
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00530000064359.c.b.o.a.e.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b.d #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Gilthead seabream	MODERN SPECIES	7	gna11b (ENSSAUG00010009911)	ENSSAUG00010009906	tpgs1 (ENSSAUG00010009905)	ISYNA1 (ENSSAUG00010009829) #23	pdcd10a (ENSSAUG00010009819)	ENSSAUG00010009814	ENSSAUG00010009812	SLITRK3 (ENSSAUG00010009809)	NRDC (ENSSAUG00010025795)	fam163ab (ENSSAUG00010025767)	ENSSAUG00010025765	ebi3 (ENSSAUG00010025764)	odf3l2a (ENSSAUG00010025763)	crlf1a (ENSSAUG00010025762) #29	keap1a (ENSSAUG00010025753)	SSBP4 (ENSSAUG00010025749) #22	ENSSAUG00010025746	ENSSAUG00010025743 #24	d2hgdh (ENSSAUG00010025739)	acvr1l (ENSSAUG00010025730)	otomp (ENSSAUG00010025729)	hs6st1b (ENSSAUG00010025723)	uggt1 (ENSSAUG00010025590)	ENSSAUG00010025581	ola1 (ENSSAUG00010025576)	TRA2B (ENSSAUG00010025553)	ENSSAUG00010025552	ENSSAUG00010025541	smoc1 (ENSSAUG00010025535)	ENSSAUG00010025533	PLEKHD1 (ENSSAUG00010025529)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	16	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00530000064359.c.b.o.a.e.b	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b.d #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
European seabass	MODERN SPECIES	2	gna11b (ENSDLAG00005033191)	ENSDLAG00005034550	ENSDLAG00005013251	ENSDLAG00005013126 #23	ENSDLAG00005013060	ENSDLAG00005031394	ENSDLAG00005028316	ENSDLAG00005013044	ENSDLAG00005013034	ENSDLAG00005010223	ENSDLAG00005032040	ebi3 (ENSDLAG00005010114)	odf3l2a (ENSDLAG00005010111)	crlf1a (ENSDLAG00005010017) #29	keap1a (ENSDLAG00005009923)	ENSDLAG00005033152 #22	ENSDLAG00005009894	ENSDLAG00005009882 #24	d2hgdh (ENSDLAG00005009591)	acvr1l (ENSDLAG00005009489)	otomp (ENSDLAG00005009478)	ENSDLAG00005009425	uggt1 (ENSDLAG00005008037)	ENSDLAG00005007955	ENSDLAG00005007837	ENSDLAG00005032411	ENSDLAG00005007783	atg9a (ENSDLAG00005007653)	ENSDLAG00005007433	ENSDLAG00005029107	ENSDLAG00005007352
Large yellow croaker	MODERN SPECIES	495	ENSLCRG00005017106	tpgs1 (ENSLCRG00005017107)	ISYNA1 (ENSLCRG00005017110) #23	pdcd10a (ENSLCRG00005017128)	PDCD10 (ENSLCRG00005001432)	ENSLCRG00005001442	SLITRK3 (ENSLCRG00005001452)	NRDC (ENSLCRG00005001922)	ENSLCRG00005007963	FAM163A (ENSLCRG00005007964)	ENSLCRG00005007965	ebi3 (ENSLCRG00005007969)	odf3l2a (ENSLCRG00005007971)	crlf1a (ENSLCRG00005007981) #29	keap1a (ENSLCRG00005007995)	ENSLCRG00005008413 #22	ENSLCRG00005008482	ENSLCRG00005008484 #24	d2hgdh (ENSLCRG00005008486)	acvr1l (ENSLCRG00005008695)	otomp (ENSLCRG00005008923)	hs6st1b (ENSLCRG00005008924)	uggt1 (ENSLCRG00005008936)	ENSLCRG00005009067	ola1 (ENSLCRG00005009072)	TRA2B (ENSLCRG00005009291)	ENSLCRG00005009295	zgc:112416 (ENSLCRG00005009300)	atg9a (ENSLCRG00005009303)	ENSLCRG00005009335	ENSLCRG00005011487
Perciformes	ANCESTRAL SPECIES	12	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Cottioidei	ANCESTRAL SPECIES	8	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Stickleback	MODERN SPECIES	15	gna11b (ENSGACG00000009827)	ENSGACG00000009853	tpgs1 (ENSGACG00000009855)	ISYNA1 (ENSGACG00000009858) #23	pdcd10a (ENSGACG00000009899)	ENSGACG00000009919	ENSGACG00000009920	ENSGACG00000009921	SLITRK3 (ENSGACG00000009924)	NRDC (ENSGACG00000009929)	ENSGACG00000009949	ENSGACG00000009955	ebi3 (ENSGACG00000009963)	crlf1a (ENSGACG00000009968) #29	keap1a (ENSGACG00000009976)	SSBP4 (ENSGACG00000009986) #22	ENSGACG00000009994	ENSGACG00000009995 #24	d2hgdh (ENSGACG00000010002)	acvr1l (ENSGACG00000010017)	otomp (ENSGACG00000010021)	hs6st1b (ENSGACG00000010025)	uggt1 (ENSGACG00000010029)	ENSGACG00000010072	ola1 (ENSGACG00000010083)	TRA2B (ENSGACG00000010109)	ENSGACG00000010116	atg9a (ENSGACG00000010122)	ENSGACG00000010131	ENSGACG00000010136	TSPEAR (ENSGACG00000010149)
Lumpfish	MODERN SPECIES	14	ENSCLMG00005017287	gna11b (ENSCLMG00005017289)	ENSCLMG00005017298	tpgs1 (ENSCLMG00005017299)	ISYNA1 (ENSCLMG00005017301) #23	pdcd10a (ENSCLMG00005017315)	si:dkey-56i24.1 (ENSCLMG00005017340)	SLITRK3 (ENSCLMG00005017341)	NRDC (ENSCLMG00005017406)	ENSCLMG00005020861	ENSCLMG00005020862	ENSCLMG00005020865	odf3l2a (ENSCLMG00005020867)	crlf1a (ENSCLMG00005020870) #29	keap1a (ENSCLMG00005020895)	SSBP4 (ENSCLMG00005020898) #22	ENSCLMG00005020900	ENSCLMG00005020901 #24	ehd4 (ENSCLMG00005020902)	KLHL10 (ENSCLMG00005020919)	ENSCLMG00005020920	foxg1a (ENSCLMG00005020922)	PRKD1 (ENSCLMG00005020924)	ENSCLMG00005021006	eapp (ENSCLMG00005021007)	sptssa (ENSCLMG00005021008)	ENSCLMG00005021009	egln3 (ENSCLMG00005021010)	ENSCLMG00005021012	ENSCLMG00005021022	ARHGAP5 (ENSCLMG00005021023)
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000162569.b.k.b	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b
Channel bull blenny	MODERN SPECIES	14	chico (ENSCGOG00000024117)	gna11b (ENSCGOG00000024124)	ENSCGOG00000024156	tpgs1 (ENSCGOG00000024157)	ISYNA1 (ENSCGOG00000024162) #23	pdcd10a (ENSCGOG00000024206)	si:dkey-56i24.1 (ENSCGOG00000024226)	SLITRK3 (ENSCGOG00000024227)	NRDC (ENSCGOG00000024290)	FAM163A (ENSCGOG00000024436)	ENSCGOG00000024438	ebi3 (ENSCGOG00000024441)	odf3l2a (ENSCGOG00000024442)	crlf1a (ENSCGOG00000024443) #29	keap1a (ENSCGOG00000024445)	SSBP4 (ENSCGOG00000024454) #22	ENSCGOG00000024458	ENSCGOG00000024459 #24	d2hgdh (ENSCGOG00000024464)	acvr1l (ENSCGOG00000024483)	otomp (ENSCGOG00000024508)	hs6st1b (ENSCGOG00000024510)	uggt1 (ENSCGOG00000024532)	ENSCGOG00000024554	ola1 (ENSCGOG00000024558)	TRA2B (ENSCGOG00000024584)	ENSCGOG00000024585	ENSCGOG00000024592	atg9a (ENSCGOG00000024593)	ENSCGOG00000024603	ENSCGOG00000024638
Pike perch	MODERN SPECIES	24	gna11b (ENSSLUG00000025627)	ENSSLUG00000025633	tpgs1 (ENSSLUG00000025636)	ISYNA1 (ENSSLUG00000025641) #23	pdcd10a (ENSSLUG00000025653)	ENSSLUG00000025659	ENSSLUG00000025661	NRDC (ENSSLUG00000025718)	FAM163A (ENSSLUG00000025810)	ENSSLUG00000025812	ebi3 (ENSSLUG00000025814)	odf3l2a (ENSSLUG00000005218)	crlf1a (ENSSLUG00000005244) #29	keap1a (ENSSLUG00000005290)	ENSSLUG00000005368	ENSSLUG00000005381 #22	ENSSLUG00000005419	ENSSLUG00000005431 #24	d2hgdh (ENSSLUG00000005451)	acvr1l (ENSSLUG00000005508)	otomp (ENSSLUG00000005563)	hs6st1b (ENSSLUG00000005585)	uggt1 (ENSSLUG00000005775)	ENSSLUG00000008173	ola1 (ENSSLUG00000008182)	TRA2B (ENSSLUG00000008202)	ENSSLUG00000008209	ENSSLUG00000008218	atg9a (ENSSLUG00000008244)	ENSSLUG00000008287	ENSSLUG00000008296
Cod	MODERN SPECIES	18	chico (ENSGMOG00000012064)	gna11b (ENSGMOG00000012068)	ENSGMOG00000026137	ENSGMOG00000012069	ENSGMOG00000012071 #23	ENSGMOG00000020578	ENSGMOG00000012076	ENSGMOG00000032279	ENSGMOG00000023572	ENSGMOG00000035278	ENSGMOG00000032048	ENSGMOG00000027795	ENSGMOG00000024957	ENSGMOG00000003947	keap1a (ENSGMOG00000004256)	ENSGMOG00000004276 #22	ENSGMOG00000004308 #24	d2hgdh (ENSGMOG00000004343)	acvr1l (ENSGMOG00000000177)	ENSGMOG00000014497	uggt1 (ENSGMOG00000000541)	ENSGMOG00000000587	ENSGMOG00000000608	ENSGMOG00000030964	ENSGMOG00000026962	ENSGMOG00000036983	ENSGMOG00000034016	ENSGMOG00000030629	ENSGMOG00000025105	ENSGMOG00000029832	ENSGMOG00000031190
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00950000183049.C.a.b #22
Salmoninae	ANCESTRAL SPECIES	461				ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b	ENSGT00940000155885.a	ENSGT00940000159004.a.d.a	ENSGT00530000063615.a.q.a	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.e #29	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.f #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00550000075086	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b	ENSGT00940000166078.c	ENSGT00940000166763.d	ENSGT00950000183071.a.a.b.c.a.b	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.a
Huchen	DUPLICATION
Huchen	MODERN SPECIES	1408		ENSHHUG00000044574	PDCD10 (ENSHHUG00000044565)	ENSHHUG00000044549 #23	gna11b (ENSHHUG00000044381)	ENSHHUG00000044376	ENSHHUG00000044375	PLPP2 (ENSHHUG00000044372)	shda (ENSHHUG00000044370)	yju2 (ENSHHUG00000044366)	ebi3 (ENSHHUG00000044363)	odf3l2a (ENSHHUG00000044359)	crlf1a (ENSHHUG00000044351) #29	ENSHHUG00000044342	keap1a (ENSHHUG00000044328)	SSBP4 (ENSHHUG00000044204) #22	ENSHHUG00000044193	d2hgdh (ENSHHUG00000044183)	acvr1l (ENSHHUG00000044175)	ENSHHUG00000044168	otomp (ENSHHUG00000044158)
Huchen	MODERN SPECIES	2334		ENSHHUG00000048319	PDCD10 (ENSHHUG00000048206)	ENSHHUG00000048199 #23	ENSHHUG00000048193 #23	ENSHHUG00000048186	gna11b (ENSHHUG00000048040)	ENSHHUG00000048034	PLPP2 (ENSHHUG00000048032)	shda (ENSHHUG00000048024)	yju2 (ENSHHUG00000048018)	ENSHHUG00000048015	odf3l2a (ENSHHUG00000048005)	crlf1a (ENSHHUG00000048002) #29	keap1a (ENSHHUG00000047998)	SSBP4 (ENSHHUG00000047816) #22	ENSHHUG00000047801	ENSHHUG00000047793	acvr1l (ENSHHUG00000047779)	ENSHHUG00000047772	otomp (ENSHHUG00000047764)
Salmoninae_a	ANCESTRAL SPECIES	193										ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.a	ENSGT00940000155885.a.c	ENSGT00940000159004.a.d.a	ENSGT00530000063615.a.q.a	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.e #29	ENSGT00950000183049.C.a.b #22	ENSGT00390000012355.A.b	ENSGT00550000075086.c	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b
Salmo	ANCESTRAL SPECIES	48	ENSGT00940000155026.c.e	ENSGT00940000158681.b.d	ENSGT00530000064359.c.b.m.a.a	ENSGT00390000017913.`b.b.d	ENSGT00940000163250.C.q.a	ENSGT00390000018395.c.b.b #23	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b	ENSGT00940000155885.a.d	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00550000075086.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.a	ENSGT00940000166763.c	ENSGT00950000183071.a.a.b.c.a.a	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000163513.d	ENSGT00390000000673.a.b.c	ENSGT00940000155099.k.b.e.b.a	ENSGT00950000183009.db.a.a.a	ENSGT00940000155489.a.d	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00940000157267.a	ENSGT00510000047718.c
River trout	DUPLICATION
River trout	MODERN SPECIES	32	ENSSTUG00000038887	CARTPT (ENSSTUG00000038907)	ENSSTUG00000038916	ENSSTUG00000038933	ENSSTUG00000038944	SLITRK3 (ENSSTUG00000039077)	ISYNA1 (ENSSTUG00000039107) #23	ENSSTUG00000039195	gna11b (ENSSTUG00000039210)	ENSSTUG00000039316	PLPP2 (ENSSTUG00000039322)	shda (ENSSTUG00000039327)	yju2 (ENSSTUG00000039333)	odf3l2a (ENSSTUG00000039344)	crlf1a (ENSSTUG00000039354) #29	SSBP4 (ENSSTUG00000039426) #22	ENSSTUG00000042209	d2hgdh (ENSSTUG00000042238)	acvr1l (ENSSTUG00000042270)	ENSSTUG00000042317	otomp (ENSSTUG00000042353)	HS6ST1 (ENSSTUG00000042476)	uggt1 (ENSSTUG00000042640)	ENSSTUG00000043329	ENSSTUG00000043340	ENSSTUG00000043355	ENSSTUG00000043365	ENSSTUG00000043388	ENSSTUG00000043590	TRA2B (ENSSTUG00000043611)	ENSSTUG00000043721
River trout	MODERN SPECIES	36	ENSSTUG00000050808	PDCD10 (ENSSTUG00000050805)	ENSSTUG00000050804	ISYNA1 (ENSSTUG00000050801) #23	ISYNA1 (ENSSTUG00000050796) #23	ENSSTUG00000050794	gna11b (ENSSTUG00000050793)	ENSSTUG00000050787	PLPP2 (ENSSTUG00000050778)	shda (ENSSTUG00000050767)	yju2 (ENSSTUG00000050759)	ebi3 (ENSSTUG00000050755)	odf3l2a (ENSSTUG00000050752)	crlf1a (ENSSTUG00000050745) #29	keap1a (ENSSTUG00000050739)	SSBP4 (ENSSTUG00000050664) #22	d2hgdh (ENSSTUG00000050650)	acvr1l (ENSSTUG00000050643)	ENSSTUG00000050641	otomp (ENSSTUG00000050639)	HS6ST1 (ENSSTUG00000050637)	uggt1 (ENSSTUG00000050440)	ENSSTUG00000050395	ENSSTUG00000050394	ENSSTUG00000050390	ENSSTUG00000050379	ENSSTUG00000050370	TRA2B (ENSSTUG00000050364)	ENSSTUG00000050361	zgc:112416 (ENSSTUG00000050353)	ENSSTUG00000050347
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000094874	ENSSSAG00000109633	ENSSSAG00000106935	ENSSSAG00000099581	prdm9 (ENSSSAG00000054294)	ENSSSAG00000075423	ENSSSAG00000080027	ENSSSAG00000075253 #23	ENSSSAG00000075245	gna11b (ENSSSAG00000084504)	ENSSSAG00000075134	ENSSSAG00000096795	shda (ENSSSAG00000075110)	ENSSSAG00000116937	ENSSSAG00000075094 #29	ENSSSAG00000104045 #22	ENSSSAG00000073044	d2hgdh (ENSSSAG00000073042)	ENSSSAG00000096061	acvr1l (ENSSSAG00000073041)	ENSSSAG00000073038	otomp (ENSSSAG00000073035)	ENSSSAG00000073029	uggt1 (ENSSSAG00000072953)	ENSSSAG00000072938	ENSSSAG00000072947	ENSSSAG00000119394	ENSSSAG00000121488	ENSSSAG00000101873	ENSSSAG00000072836	ENSSSAG00000072819
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000080020	ENSSSAG00000098402	PDC10 (ENSSSAG00000080019)	ENSSSAG00000080018	ENSSSAG00000115306 #23	ENSSSAG00000080014 #23	ENSSSAG00000080012	gna11b (ENSSSAG00000108714)	ENSSSAG00000079986	ENSSSAG00000093634	shda (ENSSSAG00000114133)	yju2 (ENSSSAG00000075105)	ebi3 (ENSSSAG00000079970)	crlf1a (ENSSSAG00000079959) #29	keap1a (ENSSSAG00000079871)	ENSSSAG00000079443 #22	d2hgdh (ENSSSAG00000079411)	ENSSSAG00000079387	ENSSSAG00000094489	otomp (ENSSSAG00000103893)	acvr1l (ENSSSAG00000079396)	ENSSSAG00000079371	ENSSSAG00000078840	ENSSSAG00000116422	ENSSSAG00000092203	ENSSSAG00000078811	ENSSSAG00000078778	ENSSSAG00000078759	ENSSSAG00000078718	ENSSSAG00000083359	ENSSSAG00000072765
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	49	ENSGT00940000159228.a.b.a.b	ENSGT00940000155026.c.g	ENSGT00940000158681.b.d.a	ENSGT00530000064359.c.b.m.b	ENSGT00390000017913.`b.b.c.b	ENSGT00390000018395.c.a #23	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b	ENSGT00940000155885.a.c.a	ENSGT00940000159004.a.d.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a.c	ENSGT00530000063615.a.q.b.a	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.e #29	ENSGT00950000183049.C.a.b.g #22	ENSGT00390000012355.A.b	ENSGT00550000075086.c	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.c	ENSGT00940000166763.d.b	ENSGT00950000183071.a.a.b.c.a.b.b	ENSGT00390000004600.b.a.g	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.b	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.b	ENSGT00390000000673.a.b.d	ENSGT00940000155099.k.b.e.b.b	ENSGT00950000183009.db.a.b.b	ENSGT00940000155489.a.c.b	ENSGT00730000110871.a.a.a.b
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000068448	ENSOMYG00000004349	ENSOMYG00000070157	ENSOMYG00000004766	ENSOMYG00000005025	ENSOMYG00000005012	ENSOMYG00000005085	ENSOMYG00000005398 #23	gna11b (ENSOMYG00000005549)	ENSOMYG00000005646	ENSOMYG00000005754	shda (ENSOMYG00000005812)	yju2 (ENSOMYG00000005836)	ENSOMYG00000005860	ENSOMYG00000076501 #29	ENSOMYG00000006146 #22	d2hgdh (ENSOMYG00000006336)	acvr1l (ENSOMYG00000006432)	ENSOMYG00000006485	otomp (ENSOMYG00000006550)	ENSOMYG00000073951	ENSOMYG00000054008	uggt1 (ENSOMYG00000006857)	ENSOMYG00000007103	ENSOMYG00000056207	OLA1 (ENSOMYG00000007476)	ENSOMYG00000007652	ENSOMYG00000007737	ENSOMYG00000007792	ENSOMYG00000029816	ENSOMYG00000030120
Oncorhynchus_a	ANCESTRAL SPECIES	482															ENSGT00940000165458.h	ENSGT00950000183049.C.a.b.g #22	ENSGT00390000012355.A.b
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	25	ENSOKIG00005027549	ENSOKIG00005027561	NRDC (ENSOKIG00005027880)	SLITRK3 (ENSOKIG00005030061)	ENSOKIG00005030072	PDCD10 (ENSOKIG00005030091)	ISYNA1 (ENSOKIG00005030253) #23	ENSOKIG00005030351	gna11b (ENSOKIG00005030387)	ENSOKIG00005030475	PLPP2 (ENSOKIG00005030536)	shda (ENSOKIG00005028430)	yju2 (ENSOKIG00005028457)	ODF3L2 (ENSOKIG00005028473)	CRLF1 (ENSOKIG00005028497) #29	SSBP4 (ENSOKIG00005028601) #22	ENSOKIG00005029124	d2hgdh (ENSOKIG00005029136)	acvr1l (ENSOKIG00005029179)	ENSOKIG00005029264	otomp (ENSOKIG00005029296)	HS6ST1 (ENSOKIG00005029331)	uggt1 (ENSOKIG00005029368)	ENSOKIG00005029574	ENSOKIG00005029596	ENSOKIG00005029607	ENSOKIG00005029627	ENSOKIG00005029647	ENSOKIG00005029825	TRA2B (ENSOKIG00005029943)	ENSOKIG00005030068
Coho salmon	MODERN SPECIES	7	ENSOKIG00005018637	ENSOKIG00005018617	ENSOKIG00005018609	PDCD10 (ENSOKIG00005018545)	ENSOKIG00005018532	ISYNA1 (ENSOKIG00005018478) #23	ENSOKIG00005018458	gna11b (ENSOKIG00005018387)	ENSOKIG00005018372	PLPP2 (ENSOKIG00005018366)	shda (ENSOKIG00005018347)	yju2 (ENSOKIG00005018340)	ebi3 (ENSOKIG00005018328)	keap1a (ENSOKIG00005018304)	crlf1a (ENSOKIG00005018246) #29	SSBP4 (ENSOKIG00005018015) #22	ENSOKIG00005017989	ENSOKIG00005017928	ENSOKIG00005017898	otomp (ENSOKIG00005017882)	hs6st1b (ENSOKIG00005017860)	UGGT1 (ENSOKIG00005017654)	ENSOKIG00005017619	ENSOKIG00005017601	ENSOKIG00005017591	ENSOKIG00005017581	ENSOKIG00005017465	ENSOKIG00005017445	TRA2B (ENSOKIG00005017348)	ENSOKIG00005017302	zgc:112416 (ENSOKIG00005017214)
Chinook salmon	MODERN SPECIES	5	ENSOTSG00005015926	ENSOTSG00005015930	NRDC (ENSOTSG00005015965)	ENSOTSG00005022133	PDCD10 (ENSOTSG00005022134)	ISYNA1 (ENSOTSG00005022161) #23	ENSOTSG00005022174	gna11b (ENSOTSG00005022175)	ENSOTSG00005022176	shda (ENSOTSG00005022177)	yju2 (ENSOTSG00005022178)	ebi3 (ENSOTSG00005022180)	odf3l2a (ENSOTSG00005022181)	crlf1a (ENSOTSG00005022182) #29	keap1a (ENSOTSG00005022183)	ENSOTSG00005022184 #22	ENSOTSG00005022185	ENSOTSG00005022188	ENSOTSG00005022189	d2hgdh (ENSOTSG00005022190)	acvr1l (ENSOTSG00005022191)	ENSOTSG00005022193	otomp (ENSOTSG00005022194)	hs6st1b (ENSOTSG00005022195)	uggt1 (ENSOTSG00005022205)	ENSOTSG00005022580	ENSOTSG00005022583	ENSOTSG00005022588	ENSOTSG00005022591	ENSOTSG00005022594	ENSOTSG00005022645
Oncorhynchus	ANCESTRAL SPECIES	70	ENSGT00940000158681.b.d.b	ENSGT00530000064359.c.b.m.a.a	ENSGT00530000064359.c.b.m.a.b	ENSGT00390000017913.`b.b.c.a	ENSGT00390000018395.c.b.b #23	ENSGT00940000163250.C.q.a	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b	ENSGT00940000155885.a.c.b	ENSGT00940000159004.a.d.a.a	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b.h #22	ENSGT00550000075086.d	ENSGT00940000166078.c	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.d	ENSGT00940000166763.d.a	ENSGT00950000183071.a.a.b.c.a.b.a	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000163513.d	ENSGT00390000000673.a.b.c	ENSGT00940000155099.k.b.e.a	ENSGT00950000183009.db.a.b.a	ENSGT00940000155489.a.d	ENSGT00390000011514	ENSGT00940000157267.a	ENSGT00510000047718.c
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000028995	ENSOMYG00000029073	ENSOMYG00000068347	ENSOMYG00000029039	ENSOMYG00000029105 #23	ENSOMYG00000029120	gna11b (ENSOMYG00000029266)	ENSOMYG00000060163	ENSOMYG00000029333	shda (ENSOMYG00000029342)	yju2 (ENSOMYG00000029355)	ebi3 (ENSOMYG00000060222)	odf3l2a (ENSOMYG00000029374)	crlf1a (ENSOMYG00000029383) #29	keap1a (ENSOMYG00000029406)	ENSOMYG00000029537 #22	d2hgdh (ENSOMYG00000029891)	acvr1l (ENSOMYG00000029939)	otomp (ENSOMYG00000030021)	ENSOMYG00000030085	ENSOMYG00000053703	uggt1 (ENSOMYG00000030624)	ENSOMYG00000031247	ENSOMYG00000031259	ENSOMYG00000031275	ENSOMYG00000031318	ENSOMYG00000031443	ENSOMYG00000031530	ENSOMYG00000031683	ENSOMYG00000031785	ENSOMYG00000031847
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
P. kingsleyae	MODERN SPECIES	150	pigk (ENSPKIG00000009549)	st6galnac5b (ENSPKIG00000009591)	st6galnac3 (ENSPKIG00000009626)	rabggtb (ENSPKIG00000009653)	ENSPKIG00000009680	ENSPKIG00000009694	SLC44A5 (ENSPKIG00000009709)	lhx8a (ENSPKIG00000009750)	tyw3 (ENSPKIG00000009802)	cryz (ENSPKIG00000009817)	erich3 (ENSPKIG00000009840)	tnni3k (ENSPKIG00000009883)	ENSPKIG00000009952	fam151a (ENSPKIG00000009966)	acot11a (ENSPKIG00000010009)	SSBP4 (ENSPKIG00000010133) #22	mrpl37 (ENSPKIG00000010297)	CDCP2 (ENSPKIG00000010337)	tceanc2 (ENSPKIG00000010382)	lrrc42 (ENSPKIG00000010397)	yipf1 (ENSPKIG00000010413)	zgc:113691 (ENSPKIG00000010438)	ndc1 (ENSPKIG00000010451)	ENSPKIG00000010502	ENSPKIG00000010513	ENSPKIG00000010526	BEST4 (ENSPKIG00000010537)	rps8a (ENSPKIG00000010571)	ENSPKIG00000010603	hectd3 (ENSPKIG00000010636)	urod (ENSPKIG00000010701)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Red-bellied piranha	MODERN SPECIES	282																ENSPNAG00000028579 #22	fkbp8 (ENSPNAG00000028627) #25	ell (ENSPNAG00000006933) #24	DOT1L (ENSPNAG00000028725)	ENSPNAG00000028753	amh (ENSPNAG00000028767)	oaz1a (ENSPNAG00000028813)	org (ENSPNAG00000004448)	lingo3a (ENSPNAG00000028852)	nfil3-4 (ENSPNAG00000028866)	ENSPNAG00000028873	ENSPNAG00000028892	ONECUT3 (ENSPNAG00000028955)	foxq2 (ENSPNAG00000028978)	si:ch211-129c21.1 (ENSPNAG00000028992)	P3H2 (ENSPNAG00000029093)
Electric eel	MODERN SPECIES	299																ssbp4 (ENSEEEG00000012389) #22	fkbp8 (ENSEEEG00000012388) #25	ell (ENSEEEG00000012323) #24	DOT1L (ENSEEEG00000012320)	amh (ENSEEEG00000012317)	oaz1a (ENSEEEG00000012313)	org (ENSEEEG00000012311)	lingo3a (ENSEEEG00000012309)	nfil3-4 (ENSEEEG00000012308)	ENSEEEG00000012305	ENSEEEG00000012304	ENSEEEG00000012303	ENSEEEG00000012302	ENSEEEG00000012299	si:ch211-129c21.1 (ENSEEEG00000012285)	P3H2 (ENSEEEG00000012247)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Goldfish	MODERN SPECIES	11	lig1 (ENSCARG00000008435)	mpz (ENSCARG00000008937)	atp1a2a (ENSCARG00000009083)	sdhc (ENSCARG00000011699)	cadm3 (ENSCARG00000011754)	kirrel1b (ENSCARG00000011824)	ENSCARG00000011910	ENSCARG00000011924	ZEB1 (ENSCARG00000011938)	arhgap12a (ENSCARG00000011963)	ENSCARG00000012240	epc1b (ENSCARG00000012011)	KIF5B (ENSCARG00000012344)	ITGB1 (ENSCARG00000012932)	nrp1b (ENSCARG00000013091)	ENSCARG00000013143 #22	ZNF622 (ENSCARG00000013151)	acvr1l (ENSCARG00000013161)	otomp (ENSCARG00000013173)	gpc1b (ENSCARG00000013194)	ENSCARG00000013228	SVIL (ENSCARG00000013341)	otomp (ENSCARG00000016825)	acvr1l (ENSCARG00000016849)	ZNF622 (ENSCARG00000016870)	ENSCARG00000016883	tnr (ENSCARG00000016934)	KIAA0040 (ENSCARG00000017422)	tnn (ENSCARG00000017442)	cacybp (ENSCARG00000017497)	plk3 (ENSCARG00000017546)
Euteleosteomorpha	ANCESTRAL SPECIES	210	ENSGT00390000017913.`b.b	ENSGT00390000018395 #23	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.b #22	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a
Protacanthopterygii	ANCESTRAL SPECIES	104	ENSGT00940000158681.b	ENSGT00530000064359.c.b	ENSGT00390000017913.`b.b	ENSGT00390000018395 #23	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.b #22	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c.a	ENSGT00390000004600.b.a	ENSGT00940000154308.D.c.a.a
Northern pike	MODERN SPECIES	21	SLITRK3 (ENSELUG00000008468)	ENSELUG00000008479	pdcd10a (ENSELUG00000008555)	ISYNA1 (ENSELUG00000008587) #23	ENSELUG00000008611	gna11b (ENSELUG00000008649)	TLE5 (ENSELUG00000028407)	PLPP2 (ENSELUG00000025589)	theg (ENSELUG00000027610)	shda (ENSELUG00000008738)	yju2 (ENSELUG00000008776)	ebi3 (ENSELUG00000008819)	odf3l2a (ENSELUG00000008837)	crlf1a (ENSELUG00000008880) #29	keap1a (ENSELUG00000008917)	SSBP4 (ENSELUG00000008998) #22	ENSELUG00000009064	ENSELUG00000009037	poglut1 (ENSELUG00000009087)	ENSELUG00000009144	VANGL1 (ENSELUG00000009195)	ENSELUG00000009208	ENSELUG00000009243	tlr22 (ENSELUG00000009256)	ENSELUG00000009290	ENSELUG00000009319	MAP4K4 (ENSELUG00000009520)	ENSELUG00000009573	atg9a (ENSELUG00000009602)	ENSELUG00000009709	ENSELUG00000001518
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Anabantaria	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b #22
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00940000163250.C	ENSGT00500000045074	ENSGT00390000018395 #23	ENSGT00390000017913.`b.b	ENSGT00530000064359.c.b.p	ENSGT00530000064359.c.b.o.a	ENSGT00940000158681.b	ENSGT00940000155026.c	ENSGT00940000159228.a.b	ENSGT00940000154611.ad.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a #29	ENSGT00940000165458	ENSGT00950000183049.C.a.b #22	ENSGT00950000183049.C.b #22	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b #24	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a	ENSGT00940000155099.k.b	ENSGT00390000000673.a.b	ENSGT00950000183009.db.a	ENSGT00940000155489.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000014839.b	ENSGT00940000164909.e.b
Siamese fighting fish	MODERN SPECIES	12	ENSBSLG00000024776	ENSBSLG00000024768	ENSBSLG00000024757	ENSBSLG00000024751	ENSBSLG00000024745	ENSBSLG00000024735	SLITRK3 (ENSBSLG00000024726)	NRDC (ENSBSLG00000023720)	FAM163A (ENSBSLG00000023609)	ENSBSLG00000023598	odf3l2a (ENSBSLG00000023577)	ENSBSLG00000023571	crlf1a (ENSBSLG00000023494) #29	ENSBSLG00000023481	keap1a (ENSBSLG00000023461)	SSBP4 (ENSBSLG00000022929) #22	ENSBSLG00000022867	ENSBSLG00000022810 #24	d2hgdh (ENSBSLG00000022516)	acvr1l (ENSBSLG00000022490)	otomp (ENSBSLG00000022464)	hs6st1b (ENSBSLG00000022354)	uggt1 (ENSBSLG00000022072)	ENSBSLG00000022019	ola1 (ENSBSLG00000021790)	TRA2B (ENSBSLG00000021742)	ENSBSLG00000021705	pcnt (ENSBSLG00000021205)	zgc:112416 (ENSBSLG00000020378)	atg9a (ENSBSLG00000019864)	ENSBSLG00000019483
Ovalentaria	DUPLICATION
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Guppy	MODERN SPECIES	453	gna11b (ENSPREG00000010597)	ENSPREG00000010588	tpgs1 (ENSPREG00000010569)	ISYNA1 (ENSPREG00000010538) #23	pdcd10a (ENSPREG00000010515)	ENSPREG00000010501	ENSPREG00000010488	SLITRK3 (ENSPREG00000010471)	NRDC (ENSPREG00000010372)	FAM163A (ENSPREG00000010331)	ENSPREG00000010233	ebi3 (ENSPREG00000010198)	odf3l2a (ENSPREG00000010183)	crlf1a (ENSPREG00000010125) #29	keap1a (ENSPREG00000010089)	SSBP4 (ENSPREG00000009984) #22	ENSPREG00000009951	ENSPREG00000009938 #24	d2hgdh (ENSPREG00000009919)	acvr1l (ENSPREG00000009883)	otomp (ENSPREG00000009862)	ENSPREG00000009849	plek2 (ENSPREG00000009799)	si:ch211-10a23.2 (ENSPREG00000009769)	zfyve26 (ENSPREG00000009462)	rdh12 (ENSPREG00000009340)	vti1b (ENSPREG00000009316)	arg2 (ENSPREG00000009289)	RBM25 (ENSPREG00000009228)	slc39a9 (ENSPREG00000009191)	PLEKHD1 (ENSPREG00000009160)
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.a #22
Lyretail cichlid	MODERN SPECIES	346	ENSNBRG00000021590	ENSNBRG00000021598	tpgs1 (ENSNBRG00000021616)	ISYNA1 (ENSNBRG00000021636) #23	pdcd10a (ENSNBRG00000021668)	ENSNBRG00000021701	ENSNBRG00000021735	SLITRK3 (ENSNBRG00000021772)	NRDC (ENSNBRG00000021922)	ENSNBRG00000022388	ENSNBRG00000022430	ebi3 (ENSNBRG00000022506)	odf3l2a (ENSNBRG00000022523)	crlf1a (ENSNBRG00000022536) #29	keap1a (ENSNBRG00000022548)	ENSNBRG00000022563 #22	ENSNBRG00000022579	ENSNBRG00000022594 #24	acvr1l (ENSNBRG00000022614)	otomp (ENSNBRG00000022622)	ENSNBRG00000022635	hs6st1b (ENSNBRG00000022646)	uggt1 (ENSNBRG00000022667)	ENSNBRG00000022721	ola1 (ENSNBRG00000022738)	TRA2B (ENSNBRG00000022760)	ENSNBRG00000022774	pcnt (ENSNBRG00000022805)	atg9a (ENSNBRG00000022936)	ENSNBRG00000022997	ENSNBRG00000023039
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00950000183049.C.b.b #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a	ENSGT00940000166752
Lyretail cichlid	MODERN SPECIES	307	zgc:77486 (ENSNBRG00000009754)	ABHD17A (ENSNBRG00000009762)	rgl1 (ENSNBRG00000009778)	colgalt2b (ENSNBRG00000009871)	zgc:92140 (ENSNBRG00000010106)	EDEM3 (ENSNBRG00000010125)	npl (ENSNBRG00000010182)	sec22bb (ENSNBRG00000010265)	notch2 (ENSNBRG00000010302)	slc35a3a (ENSNBRG00000010431)	FAM78B (ENSNBRG00000010440)	rex1bd (ENSNBRG00000010464)	crlf1b (ENSNBRG00000010481) #29	tmem59l (ENSNBRG00000010502) #30	ssbp4 (ENSNBRG00000010536) #22	ENSNBRG00000010559 #22	fkbp8 (ENSNBRG00000010580) #25	ell (ENSNBRG00000010592) #24	DOT1L (ENSNBRG00000010613)	ENSNBRG00000010673	oaz1a (ENSNBRG00000010696)	ENSNBRG00000010717	org (ENSNBRG00000010726)	ENSNBRG00000010747	ENSNBRG00000010781	ENSNBRG00000010791	ONECUT3 (ENSNBRG00000010842)	foxq2 (ENSNBRG00000010887)	pias4a (ENSNBRG00000010912)	map2k2a (ENSNBRG00000010940)	ENSNBRG00000010965
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000155854.b.a.a	ENSGT00940000156012	ENSGT00940000178503	ENSGT01030000234558.C.p	ENSGT00390000014594.e.a	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00940000156569.a.b.b #29	ENSGT00390000008279.b #30	ENSGT00950000183049.C.a.a #22	ENSGT00950000183049.C.b.b #22	ENSGT00940000156705 #25	ENSGT00940000155914.c.a #24	ENSGT00390000013515	ENSGT00390000006337	ENSGT00940000159808	ENSGT00610000087460	ENSGT00390000006809	ENSGT00940000164500.b	ENSGT00940000160540.r	ENSGT00940000164108.b.b	ENSGT00940000160463	ENSGT00950000183103.d.b.a.b	ENSGT00940000166634	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Burton s mouthbrooder	MODERN SPECIES	414	zgc:77486 (ENSHBUG00000004696)	ABHD17A (ENSHBUG00000004722)	rgl1 (ENSHBUG00000004858)	colgalt2b (ENSHBUG00000004890)	zgc:92140 (ENSHBUG00000004914)	EDEM3 (ENSHBUG00000005014)	npl (ENSHBUG00000005034)	sec22bb (ENSHBUG00000005064)	notch2 (ENSHBUG00000005095)	slc35a3a (ENSHBUG00000005131)	FAM78B (ENSHBUG00000005142)	rex1bd (ENSHBUG00000005149)	crlf1b (ENSHBUG00000005206) #29	tmem59l (ENSHBUG00000005233) #30	ssbp4 (ENSHBUG00000005245) #22	ENSHBUG00000005257 #22	fkbp8 (ENSHBUG00000005368) #25	ell (ENSHBUG00000005404) #24	DOT1L (ENSHBUG00000005459)	amh (ENSHBUG00000005741)	oaz1a (ENSHBUG00000005775)	ENSHBUG00000005785	org (ENSHBUG00000005831)	lingo3a (ENSHBUG00000005836)	ENSHBUG00000005843	ENSHBUG00000005864	ONECUT3 (ENSHBUG00000005882)	foxq2 (ENSHBUG00000005900)	pias4a (ENSHBUG00000005916)	map2k2a (ENSHBUG00000005943)	ENSHBUG00000005975
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Amphiprion	ANCESTRAL SPECIES																	ENSGT00950000183049.C.b.b #22
Clown anemonefish	MODERN SPECIES	674									notch2 (ENSAOCG00000009509)	slc35a3a (ENSAOCG00000009532)	FAM78B (ENSAOCG00000000588)	rex1bd (ENSAOCG00000009582)	crlf1b (ENSAOCG00000009620) #29	tmem59l (ENSAOCG00000009634) #30	ENSAOCG00000009652 ##22	ENSAOCG00000000598 #22	fkbp8 (ENSAOCG00000009676) #25	ell (ENSAOCG00000009747) #24	DOT1L (ENSAOCG00000009816)	amh (ENSAOCG00000009856)	oaz1a (ENSAOCG00000009887)	ENSAOCG00000009915
Cod	DUPLICATION
Cod	MODERN SPECIES	3	rorca (ENSGMOG00000000779)	plin3 (ENSGMOG00000016686)	ENSGMOG00000016644	ENSGMOG00000027064	rgl1 (ENSGMOG00000023024)	ENSGMOG00000025809	ENSGMOG00000008416	npl (ENSGMOG00000018192)	sec22bb (ENSGMOG00000018174)	ENSGMOG00000034619	slc35a3a (ENSGMOG00000010386)	ENSGMOG00000003988	rex1bd (ENSGMOG00000032321)	crlf1b (ENSGMOG00000013268) #29	tmem59l (ENSGMOG00000005266) #30	ENSGMOG00000034096 #22	fkbp8 (ENSGMOG00000008694) #25	ell (ENSGMOG00000008706) #24	ENSGMOG00000008728	ENSGMOG00000008768	oaz1a (ENSGMOG00000008816)	org (ENSGMOG00000008826)	lingo3a (ENSGMOG00000028112)	ENSGMOG00000034546	ENSGMOG00000029496	ENSGMOG00000008846	ENSGMOG00000008893	pias4a (ENSGMOG00000008897)	map2k2a (ENSGMOG00000008913)	ENSGMOG00000023336	tcf3b (ENSGMOG00000008934)
Cod	MODERN SPECIES	117																ENSGMOG00000035761 #22
Elephant shark	MODERN SPECIES	1549	ENSCMIG00000005785	ccdc124 (ENSCMIG00000005789)	kcnn1b (ENSCMIG00000005806) #7	ENSCMIG00000005833	ENSCMIG00000005835	TM6SF2 (ENSCMIG00000005843)	SUGP1 (ENSCMIG00000005859)	ENSCMIG00000005865	ENSCMIG00000005871	MAP1S (ENSCMIG00000005873)	FCHO1 (ENSCMIG00000005885)	rex1bd (ENSCMIG00000005899)	crlf1b (ENSCMIG00000005903) #29	tmem59l (ENSCMIG00000005911) #30	keap1a (ENSCMIG00000005917)	zgc:110158 (ENSCMIG00000005926) #22	isyna1 (ENSCMIG00000005953) #23	ell (ENSCMIG00000005974) #24	fkbp8 (ENSCMIG00000005987) #25	MYO9B (ENSCMIG00000006006)	ENSCMIG00000006031	ENSCMIG00000006033	ENSCMIG00000006036	ENSCMIG00000006039	ENSCMIG00000006040	jund (ENSCMIG00000006046) #17	lsm4 (ENSCMIG00000006055) #18	shc2 (ENSCMIG00000006075)	ENSCMIG00000006104	TPGS1 (ENSCMIG00000006107)	sin3b (ENSCMIG00000006128)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183049.C #22
Lamprey	MODERN SPECIES	25															ENSPMAG00000010355	ENSPMAG00000007274 #22	ENSPMAG00000007269	PIDD1 (ENSPMAG00000007265)	ENSPMAG00000007257	s1pr4 (ENSPMAG00000010354)	ENSPMAG00000007256	ENSPMAG00000007252