Murinae	ANCESTRAL SPECIES	13	ENSGT00730000111429	ENSGT00390000013771	ENSGT00940000154465.C	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662 #14	ENSGT00940000160202 #15	ENSGT00500000044950 #16	ENSGT00950000183107.a.b.a #17	ENSGT00950000182802.A #18	ENSGT00390000008610.a.b.a.a.b #19	ENSGT00560000077266.b #20	ENSGT00940000159847 #21	ENSGT00940000160964 #22	ENSGT00940000163238 #23	ENSGT01090000259987.a.a.a.d #24	ENSGT00530000064267 #25	ENSGT00940000154678.a.a #26	ENSGT00940000159548	ENSGT00940000155686.j	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.i	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028
Mus	ANCESTRAL SPECIES	13	ENSGT00730000111429	ENSGT00390000013771	ENSGT00940000154465.C	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662 #14	ENSGT00940000160202 #15	ENSGT00500000044950 #16	ENSGT00950000183107.a.b.a #17	ENSGT00950000182802.A #18	ENSGT00390000008610.a.b.a.a.b #19	ENSGT00560000077266.b #20	ENSGT00940000159847 #21	ENSGT00940000160964 #22	ENSGT00940000163238 #23	ENSGT01090000259987.a.a.a.d #24	ENSGT00530000064267 #25	ENSGT00940000154678.a.a #26	ENSGT00940000159548	ENSGT00940000155686.j	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.i	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028
Mus_A	ANCESTRAL SPECIES	18	ENSGT00730000111429	ENSGT00390000013771	ENSGT00940000154465.C	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662 #14	ENSGT00940000160202 #15	ENSGT00500000044950 #16	ENSGT00950000183107.a.b.a #17	ENSGT00950000182802.A.u.b ##18	ENSGT00390000008610.a.b.a.a.b #19	ENSGT00560000077266.b #20	ENSGT00940000159847 #21	ENSGT00940000160964 #22	ENSGT00940000163238 #23	ENSGT01090000259987.a.a.a.d #24	ENSGT00530000064267 #25	ENSGT00940000154678.a.a #26	ENSGT00940000159548	ENSGT00940000155686.j	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.i	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028
Mus_B	ANCESTRAL SPECIES	18	ENSGT00730000111429	ENSGT00390000013771	ENSGT00940000154465.C	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662 #14	ENSGT00940000160202 #15	ENSGT00500000044950 #16	ENSGT00950000183107.a.b.a #17	ENSGT00950000182802.A.u.a #18	ENSGT00390000008610.a.b.a.a.b #19	ENSGT00560000077266.b #20	ENSGT00940000159847 #21	ENSGT00940000160964 #22	ENSGT00940000163238 #23	ENSGT01090000259987.a.a.a.d #24	ENSGT00530000064267 #25	ENSGT00940000154678.a.a #26	ENSGT00940000159548	ENSGT00940000155686.j	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.i	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028
Mus_C	ANCESTRAL SPECIES	12	ENSGT00730000111429	ENSGT00390000013771	ENSGT00940000154465.C	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662 #14	ENSGT00940000160202 #15	ENSGT00500000044950 #16	ENSGT00950000183107.a.b.a #17	ENSGT00950000182802.A.u.a #18	ENSGT00390000008610.a.b.a.a.b #19	ENSGT00560000077266.b #20	ENSGT00940000159847 #21	ENSGT00940000160964 #22	ENSGT00940000163238 #23	ENSGT01090000259987.a.a.a.d #24	ENSGT00530000064267 #25	ENSGT00940000154678.a.a #26	ENSGT00940000159548	ENSGT00940000155686.j	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.i	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028
Steppe mouse	MODERN SPECIES	3075								Erg (ENSMSIG00000015868) #14	Ets2 (ENSMSIG00000015834) #15	Psmg1 (ENSMSIG00000015643) #16	Brwd1 (ENSMSIG00000015168) #17	ENSMSIG00000015102 #18	ENSMSIG00000015019 #19	Lca5l (ENSMSIG00000014966) #20	Sh3bgr (ENSMSIG00000014902) #21	B3galt5 (ENSMSIG00000014879) #22	Igsf5 (ENSMSIG00000014791) #23	Itgb2l (ENSMSIG00000014689) #24	ENSMSIG00000014678 #25	Dscam (ENSMSIG00000014580) #26
spretus	MODERN SPECIES	7	Hlcs (MGP_SPRETEiJ_G0021893)	Ripply3 (MGP_SPRETEiJ_G0021894)	MGP_SPRETEiJ_G0021895	Ttc3 (MGP_SPRETEiJ_G0021896)	Vps26c (MGP_SPRETEiJ_G0021897)	Dyrk1a (MGP_SPRETEiJ_G0021898)	Kcnj6 (MGP_SPRETEiJ_G0021899)	Kcnj15 (MGP_SPRETEiJ_G0021900)	Erg (MGP_SPRETEiJ_G0021901) #14	Ets2 (MGP_SPRETEiJ_G0021902) #15	Psmg1 (MGP_SPRETEiJ_G0021903) #16	Hmgn1 (MGP_SPRETEiJ_G0021905) ##18	MGP_SPRETEiJ_G0021906 #19	Lca5l (MGP_SPRETEiJ_G0021907) #20	MGP_SPRETEiJ_G0021908 #21	B3galt5 (MGP_SPRETEiJ_G0021909) #22	Igsf5 (MGP_SPRETEiJ_G0021910) #23	Itgb2l (MGP_SPRETEiJ_G0021911) #24	MGP_SPRETEiJ_G0021912 #25	Dscam (MGP_SPRETEiJ_G0021913) #26	Bace2 (MGP_SPRETEiJ_G0021914)	MGP_SPRETEiJ_G0021915	Fam3b (MGP_SPRETEiJ_G0021916)	Tmprss2 (MGP_SPRETEiJ_G0021917)	Ripk4 (MGP_SPRETEiJ_G0021918)	Prdm15 (MGP_SPRETEiJ_G0021919)	C2cd2 (MGP_SPRETEiJ_G0021920)	Zbtb21 (MGP_SPRETEiJ_G0021921)
Mouse	MODERN SPECIES	7	Ripply3 (ENSMUSG00000022941)	Pigp (ENSMUSG00000022940)	Ttc3 (ENSMUSG00000040785)	Vps26c (ENSMUSG00000022898)	Dyrk1a (ENSMUSG00000022897)	Kcnj6 (ENSMUSG00000043301)	Kcnj15 (ENSMUSG00000062609)	Erg (ENSMUSG00000040732) #14	Ets2 (ENSMUSG00000022895) #15	Psmg1 (ENSMUSG00000022913) #16	Brwd1 (ENSMUSG00000022914) #17	Hmgn1 (ENSMUSG00000040681) ##18	Get1 (ENSMUSG00000023147)	Lca5l (ENSMUSG00000045275) #20	Sh3bgr (ENSMUSG00000040666) #21	B3galt5 (ENSMUSG00000074892) #22	Igsf5 (ENSMUSG00000000159) #23	Gm49948 (ENSMUSG00000117081)	Itgb2l (ENSMUSG00000000157) #24	Pcp4 (ENSMUSG00000090223)	Dscam (ENSMUSG00000050272) #26	Bace2 (ENSMUSG00000040605)	Mx1 (ENSMUSG00000000386)	Fam3b (ENSMUSG00000022938)	Mx2 (ENSMUSG00000023341)	Tmprss2 (ENSMUSG00000000385)	Ripk4 (ENSMUSG00000005251)	Prdm15 (ENSMUSG00000014039)	C2cd2 (ENSMUSG00000045975)	Zbtb21 (ENSMUSG00000046962)	B230307C23Rik (ENSMUSG00000080717)
Ryukyu mouse	MODERN SPECIES	7	Ripply3 (MGP_CAROLIEiJ_G0020988)	MGP_CAROLIEiJ_G0020989	Ttc3 (MGP_CAROLIEiJ_G0020990)	Vps26c (MGP_CAROLIEiJ_G0020991)	Dyrk1a (MGP_CAROLIEiJ_G0020992)	Kcnj6 (MGP_CAROLIEiJ_G0020993)	Kcnj15 (MGP_CAROLIEiJ_G0020994)	Erg (MGP_CAROLIEiJ_G0020995) #14	Ets2 (MGP_CAROLIEiJ_G0020996) #15	Psmg1 (MGP_CAROLIEiJ_G0020997) #16	Brwd1 (MGP_CAROLIEiJ_G0020998) #17	MGP_CAROLIEiJ_G0020999 ##18	MGP_CAROLIEiJ_G0021000 #19	Lca5l (MGP_CAROLIEiJ_G0021001) #20	MGP_CAROLIEiJ_G0021002 #21	B3galt5 (MGP_CAROLIEiJ_G0021003) #22	Igsf5 (MGP_CAROLIEiJ_G0021004) #23	Itgb2l (MGP_CAROLIEiJ_G0021005) #24	MGP_CAROLIEiJ_G0021006 #25	Dscam (MGP_CAROLIEiJ_G0021007) #26	Bace2 (MGP_CAROLIEiJ_G0021008)	MGP_CAROLIEiJ_G0021009	Fam3b (MGP_CAROLIEiJ_G0021010)	MGP_CAROLIEiJ_G0008949	Ripk4 (MGP_CAROLIEiJ_G0021011)	Prdm15 (MGP_CAROLIEiJ_G0021012)	C2cd2 (MGP_CAROLIEiJ_G0021013)	Zbtb21 (MGP_CAROLIEiJ_G0021014)
Shrew mouse	MODERN SPECIES	3	Ripply3 (MGP_PahariEiJ_G0016693)	MGP_PahariEiJ_G0016694	MGP_PahariEiJ_G0016695	Vps26c (MGP_PahariEiJ_G0016696)	Dyrk1a (MGP_PahariEiJ_G0016697)	Kcnj6 (MGP_PahariEiJ_G0016698)	Kcnj15 (MGP_PahariEiJ_G0016699)	Erg (MGP_PahariEiJ_G0016700) #14	Ets2 (MGP_PahariEiJ_G0016701) #15	Psmg1 (MGP_PahariEiJ_G0016702) #16	MGP_PahariEiJ_G0016703 #17	MGP_PahariEiJ_G0016704	MGP_PahariEiJ_G0016705 #19	Lca5l (MGP_PahariEiJ_G0016706) #20	MGP_PahariEiJ_G0016707 #21	B3galt5 (MGP_PahariEiJ_G0016708) #22	Igsf5 (MGP_PahariEiJ_G0016709) #23	Itgb2l (MGP_PahariEiJ_G0016710) #24	MGP_PahariEiJ_G0016711 #25	Dscam (MGP_PahariEiJ_G0016712) #26	Bace2 (MGP_PahariEiJ_G0016713)	MGP_PahariEiJ_G0016714	Fam3b (MGP_PahariEiJ_G0016715)	MGP_PahariEiJ_G0008412	Tmprss2 (MGP_PahariEiJ_G0016716)	Ripk4 (MGP_PahariEiJ_G0016717)	Prdm15 (MGP_PahariEiJ_G0016718)	C2cd2 (MGP_PahariEiJ_G0016719)	Zbtb21 (MGP_PahariEiJ_G0016720)
Rat	MODERN SPECIES	2	Pigp (ENSRNOG00000039850)	Ttc3 (ENSRNOG00000001682)	Vps26c (ENSRNOG00000001681)	Dyrk1a (ENSRNOG00000001662)	Kcnj6 (ENSRNOG00000001658)	Kcnj15 (ENSRNOG00000062944)	Erg (ENSRNOG00000001652) #14	Ets2 (ENSRNOG00000001647) #15	Psmg1 (ENSRNOG00000001643) #16	Brwd1 (ENSRNOG00000001632) #17	ENSRNOG00000067977	Hmgn1 (ENSRNOG00000048226) #18	Get1 (ENSRNOG00000001629)	Lca5l (ENSRNOG00000028248) #20	Sh3bgr (ENSRNOG00000028238) #21	B3galt5 (ENSRNOG00000030983) #22	Igsf5 (ENSRNOG00000028216) #23	ENSRNOG00000063024	Pcp4 (ENSRNOG00000001628) #25	Dscam (ENSRNOG00000027992) #26	Bace2 (ENSRNOG00000001953)	Mx1 (ENSRNOG00000001959)	Fam3b (ENSRNOG00000001962)	Mx2 (ENSRNOG00000001963)	Tmprss2 (ENSRNOG00000001976)	Ripk4 (ENSRNOG00000001618)	Prdm15 (ENSRNOG00000001620)	C2cd2 (ENSRNOG00000001621)	Zbtb21 (ENSRNOG00000001623)	Nsun3 (ENSRNOG00000070121)	RGD1565472 (ENSRNOG00000046991)