Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES 855 ENSGT00390000004681 #19 ENSGT00950000183014.f.b #22 Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Euteleostomi ANCESTRAL SPECIES 397 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 Sarcopterygii ANCESTRAL SPECIES 301 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 Tetrapoda ANCESTRAL SPECIES 165 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378 #31 Amniota ANCESTRAL SPECIES 3 ENSGT00940000162035 ENSGT00940000166022 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378.a.a #31 ENSGT00940000153378.a.b ##31 ENSGT00390000003914 ENSGT00940000157432.C ENSGT00450000040324.a ENSGT00940000159581 ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00970000197866 ENSGT00940000166193 Mammalia ANCESTRAL SPECIES 3 ENSGT00940000162035 ENSGT00940000166022 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01100000266998 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378.a.a #31 ENSGT00940000161506 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 ENSGT00390000004859 ENSGT00940000153378.a.b ##31 ENSGT00390000003914 ENSGT00940000163743 Theria ANCESTRAL SPECIES 7 ENSGT00940000162035 ENSGT00940000166022 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01100000266998 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560 #32 ENSGT00730000111801 ENSGT00940000161506 ENSGT00730000111514 ENSGT00730000111571 ENSGT00940000162197 Eutheria ANCESTRAL SPECIES 15 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01100000266998 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00730000111801 ENSGT00940000161506 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01100000266998 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00940000163354 #36 Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00730000111801 Primates ANCESTRAL SPECIES 20 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 20 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00910000147225 #34 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00910000147225 #34 Rhinopithecus ANCESTRAL SPECIES 20 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 ENSGT00940000163354.b #36 ENSGT00940000163354.a #37 ENSGT00940000159966.A Golden snub-nosed monkey MODERN SPECIES 2524 ENSRROG00000017948 #13 ENSRROG00000037717 #14 FAM83H (ENSRROG00000042826) #15 MAPK15 (ENSRROG00000038378) #16 CCDC166 (ENSRROG00000040834) #17 ZNF707 (ENSRROG00000036037) #18 GFUS (ENSRROG00000035657) #19 PYCR3 (ENSRROG00000034335) #20 ENSRROG00000044073 #21 EEF1D (ENSRROG00000031483) #22 NAPRT (ENSRROG00000038730) #23 MROH6 (ENSRROG00000043180) #24 GSDMD (ENSRROG00000033283) #25 ZC3H3 (ENSRROG00000040493) #26 RHPN1 (ENSRROG00000035681) #27 TOP1MT (ENSRROG00000036959) #28 ZNF696 (ENSRROG00000042043) #29 GLI4 (ENSRROG00000035132) #30 GPIHBP1 (ENSRROG00000000745) #31 LY6H (ENSRROG00000027475) #32 LY6L (ENSRROG00000034708) #33 ENSRROG00000042286 #34 ENSRROG00000036526 #35 ENSRROG00000045697 #36 ENSRROG00000037768 #37 Black snub-nosed monkey MODERN SPECIES 726 GRINA (ENSRBIG00000043967) PARP10 (ENSRBIG00000040506) PLEC (ENSRBIG00000041068) NRBP2 (ENSRBIG00000029768) PUF60 (ENSRBIG00000035274) SCRIB (ENSRBIG00000044468) IQANK1 (ENSRBIG00000042349) ENSRBIG00000027983 #15 MAPK15 (ENSRBIG00000033223) #16 CCDC166 (ENSRBIG00000025805) #17 ZNF707 (ENSRBIG00000023183) #18 GFUS (ENSRBIG00000042855) #19 PYCR3 (ENSRBIG00000042874) #20 TIGD5 (ENSRBIG00000039272) ENSRBIG00000038105 #21 EEF1D (ENSRBIG00000044433) #22 NAPRT (ENSRBIG00000032098) #23 GSDMD (ENSRBIG00000037912) #25 ZC3H3 (ENSRBIG00000039855) #26 RHPN1 (ENSRBIG00000044452) #27 TOP1MT (ENSRBIG00000005997) #28 ZNF696 (ENSRBIG00000029997) #29 GLI4 (ENSRBIG00000038249) #30 LY6H (ENSRBIG00000035640) #32 LY6L (ENSRBIG00000033819) #33 ENSRBIG00000028685 #34 ENSRBIG00000036306 #35 CYP11B2 (ENSRBIG00000011807) #36 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00910000147225 #34 Vervet Monkey MODERN SPECIES 27 GRINA (ENSCSAG00000008836) PARP10 (ENSCSAG00000008843) PLEC (ENSCSAG00000008854) ENSCSAG00000008863 NRBP2 (ENSCSAG00000008873) PUF60 (ENSCSAG00000008878) SCRIB (ENSCSAG00000008888) ENSCSAG00000008902 FAM83H (ENSCSAG00000008913) #15 MAPK15 (ENSCSAG00000008923) #16 CCDC166 (ENSCSAG00000008927) #17 ZNF707 (ENSCSAG00000008938) #18 GFUS (ENSCSAG00000008958) #19 PYCR3 (ENSCSAG00000008980) #20 TIGD5 (ENSCSAG00000018635) EEF1D (ENSCSAG00000008996) #22 NAPRT (ENSCSAG00000009016) #23 MROH6 (ENSCSAG00000009047) #24 GSDMD (ENSCSAG00000009063) #25 ZC3H3 (ENSCSAG00000009074) #26 MAFA (ENSCSAG00000018634) RHPN1 (ENSCSAG00000009091) #27 TOP1MT (ENSCSAG00000009107) #28 ZNF696 (ENSCSAG00000009115) #29 GLI4 (ENSCSAG00000009125) #30 ZFP41 (ENSCSAG00000018633) GPIHBP1 (ENSCSAG00000009134) #31 LY6H (ENSCSAG00000009141) #32 LY6L (ENSCSAG00000009145) #33 LY6E (ENSCSAG00000009159) ##31 CYP11B2 (ENSCSAG00000009165) #36 Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163677.a.b.a.a.a.b.a ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 Macaca ANCESTRAL SPECIES 14 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163677.a.b.a.a.a.b.a ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 Pig-tailed macaque MODERN SPECIES 146 GRINA (ENSMNEG00000029129) PARP10 (ENSMNEG00000034827) PLEC (ENSMNEG00000011406) NRBP2 (ENSMNEG00000036816) PUF60 (ENSMNEG00000031099) SCRIB (ENSMNEG00000029248) IQANK1 (ENSMNEG00000031063) FAM83H (ENSMNEG00000043239) #15 MAPK15 (ENSMNEG00000033741) #16 CCDC166 (ENSMNEG00000029532) #17 ZNF707 (ENSMNEG00000045326) #18 GFUS (ENSMNEG00000036917) #19 PYCR3 (ENSMNEG00000003395) #20 TIGD5 (ENSMNEG00000016713) ENSMNEG00000031579 #21 EEF1D (ENSMNEG00000042392) #22 NAPRT (ENSMNEG00000031643) #23 MROH6 (ENSMNEG00000038193) #24 GSDMD (ENSMNEG00000031344) #25 ZC3H3 (ENSMNEG00000029433) #26 MAFA (ENSMNEG00000033580) RHPN1 (ENSMNEG00000024830) #27 TOP1MT (ENSMNEG00000030560) #28 ZNF696 (ENSMNEG00000044951) #29 GLI4 (ENSMNEG00000033510) #30 GPIHBP1 (ENSMNEG00000043331) #31 LY6H (ENSMNEG00000030968) #32 LY6L (ENSMNEG00000034204) #33 ENSMNEG00000044835 #34 ENSMNEG00000009035 #35 ENSMNEG00000027502 #36 Macaca_a ANCESTRAL SPECIES 16 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000167847 #13 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01090000260213.a.a.a.b.b.a ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163677.a.b.a.a.a.b.a ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 11 ABHD10 (ENSMFAG00000038045) PHLDB2 (ENSMFAG00000037196) ZBED2 (ENSMFAG00000062900) CD96 (ENSMFAG00000001986) NECTIN3 (ENSMFAG00000001084) ENSMFAG00000054646 ENSMFAG00000061490 DPPA4 (ENSMFAG00000036320) ENSMFAG00000044566 C3orf85 (ENSMFAG00000044276) MORC1 (ENSMFAG00000003460) GUCA1C (ENSMFAG00000030464) TRAT1 (ENSMFAG00000002057) RETNLB (ENSMFAG00000048833) ENSMFAG00000038528 ENSMFAG00000060571 #22 DZIP3 (ENSMFAG00000046238) CIP2A (ENSMFAG00000039772) MYH15 (ENSMFAG00000040806) HHLA2 (ENSMFAG00000035665) IFT57 (ENSMFAG00000034173) CD47 (ENSMFAG00000039536) BBX (ENSMFAG00000039245) ENSMFAG00000053837 CCDC54 (ENSMFAG00000061606) ENSMFAG00000037019 ENSMFAG00000056192 CBLB (ENSMFAG00000031044) ALCAM (ENSMFAG00000045444) ZPLD1 (ENSMFAG00000033639) NFKBIZ (ENSMFAG00000036738) Crab-eating macaque MODERN SPECIES 18 PARP10 (ENSMFAG00000044942) ENSMFAG00000054231 ##14 NRBP2 (ENSMFAG00000002873) PUF60 (ENSMFAG00000043373) ENSMFAG00000058039 ENSMFAG00000061190 ENSMFAG00000035599 #13 ENSMFAG00000031846 #15 MAPK15 (ENSMFAG00000040120) #16 ENSMFAG00000064473 ZNF707 (ENSMFAG00000042318) #18 ZNF623 (ENSMFAG00000054876) GFUS (ENSMFAG00000045210) #19 PYCR3 (ENSMFAG00000030365) #20 ENSMFAG00000048899 EEF1D (ENSMFAG00000034313) #22 NAPRT (ENSMFAG00000040150) #23 GSDMD (ENSMFAG00000002466) #25 ZC3H3 (ENSMFAG00000036060) #26 RHPN1 (ENSMFAG00000032737) #27 TOP1MT (ENSMFAG00000035550) #28 ENSMFAG00000000914 ENSMFAG00000042991 ENSMFAG00000062976 #31 LY6H (ENSMFAG00000036176) #32 LY6L (ENSMFAG00000062319) #33 ENSMFAG00000061137 ##31 ENSMFAG00000044454 ##31 ENSMFAG00000055456 #35 CYP11B2 (ENSMFAG00000030325) #36 ENSMFAG00000001480 Rhesus DUPLICATION Rhesus DUPLICATION Rhesus MODERN SPECIES 11 PLXNA1 (ENSMMUG00000016720) PRR20G (ENSMMUG00000050488) ENSMMUG00000055664 TPRA1 (ENSMMUG00000000756) MCM2 (ENSMMUG00000000158) PODXL2 (ENSMMUG00000000164) ABTB1 (ENSMMUG00000000166) ENSMMUG00000056821 MGLL (ENSMMUG00000000168) KBTBD12 (ENSMMUG00000046638) SEC61A1 (ENSMMUG00000018661) RUVBL1 (ENSMMUG00000018662) EEFSEC (ENSMMUG00000018663) GATA2 (ENSMMUG00000021371) RPN1 (ENSMMUG00000018321) ENSMMUG00000020716 #22 RAB7A (ENSMMUG00000001798) ACAD9 (ENSMMUG00000006338) CFAP92 (ENSMMUG00000006343) EFCC1 (ENSMMUG00000047061) ##22 ENSMMUG00000062320 ##14 GP9 (ENSMMUG00000019799) ISY1 (ENSMMUG00000011580) ENSMMUG00000047632 CNBP (ENSMMUG00000058753) COPG1 (ENSMMUG00000013163) HMCES (ENSMMUG00000013167) H1-10 (ENSMMUG00000043091) ENSMMUG00000063541 ##14 EFCAB12 (ENSMMUG00000012721) MBD4 (ENSMMUG00000012723) Rhesus MODERN SPECIES 6 ZNF367 (ENSMMUG00000060597) HABP4 (ENSMMUG00000011369) CDC14B (ENSMMUG00000005997) PRXL2C (ENSMMUG00000008295) ZNF510 (ENSMMUG00000064034) ZNF782 (ENSMMUG00000041328) CTSV (ENSMMUG00000022971) ENSMMUG00000008466 ENSMMUG00000052868 FAM240B (ENSMMUG00000059648) ENSMMUG00000050773 ENSMMUG00000016712 ZNF658 (ENSMMUG00000007614) ENSMMUG00000038652 ZNF484 (ENSMMUG00000002396) ENSMMUG00000056934 #22 ENSMMUG00000049485 ENSMMUG00000058646 ENSMMUG00000000494 MFSD14B (ENSMMUG00000016343) ZNF169 (ENSMMUG00000015805) ENSMMUG00000057126 ENSMMUG00000002518 PTPDC1 (ENSMMUG00000002517) BARX1 (ENSMMUG00000008058) ENSMMUG00000064006 PHF2 (ENSMMUG00000008281) FAM120A (ENSMMUG00000009493) FAM120AOS (ENSMMUG00000002470) ENSMMUG00000062901 ENSMMUG00000031598 Rhesus MODERN SPECIES 18 ENSMMUG00000059569 PLEC (ENSMMUG00000000388) NRBP2 (ENSMMUG00000028891) PUF60 (ENSMMUG00000013558) SCRIB (ENSMMUG00000013552) ENSMMUG00000057609 MAPK15 (ENSMMUG00000001187) #16 ENSMMUG00000053415 CCDC166 (ENSMMUG00000061738) #17 FAM83H (ENSMMUG00000014257) #15 ZNF707 (ENSMMUG00000058943) #18 ZNF623 (ENSMMUG00000016714) ENSMMUG00000051967 ##14 GFUS (ENSMMUG00000014664) #19 TIGD5 (ENSMMUG00000014668) EEF1D (ENSMMUG00000001645) #22 NAPRT (ENSMMUG00000001641) #23 MROH6 (ENSMMUG00000001639) #24 GSDMD (ENSMMUG00000001633) #25 ZC3H3 (ENSMMUG00000058733) #26 MAFA (ENSMMUG00000051833) RHPN1 (ENSMMUG00000010939) #27 TOP1MT (ENSMMUG00000022933) #28 ENSMMUG00000065102 ZNF696 (ENSMMUG00000061203) #29 GLI4 (ENSMMUG00000059842) #30 ZFP41 (ENSMMUG00000018500) GPIHBP1 (ENSMMUG00000055361) #31 LY6H (ENSMMUG00000014830) #32 ENSMMUG00000061460 ##14 LY6L (ENSMMUG00000064147) #33 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00910000147225 #34 Olive baboon MODERN SPECIES 18 OPLAH (ENSPANG00000023293) SPATC1 (ENSPANG00000023344) GRINA (ENSPANG00000040620) PARP10 (ENSPANG00000023348) PLEC (ENSPANG00000023403) NRBP2 (ENSPANG00000013123) PUF60 (ENSPANG00000021936) SCRIB (ENSPANG00000006009) FAM83H (ENSPANG00000007686) #15 MAPK15 (ENSPANG00000000540) #16 CCDC166 (ENSPANG00000005939) #17 ZNF707 (ENSPANG00000034925) #18 ZNF623 (ENSPANG00000006279) GFUS (ENSPANG00000013295) #19 PYCR3 (ENSPANG00000001050) #20 EEF1D (ENSPANG00000012667) #22 NAPRT (ENSPANG00000017234) #23 MROH6 (ENSPANG00000013124) #24 GSDMD (ENSPANG00000005577) #25 ZC3H3 (ENSPANG00000016578) #26 MAFA (ENSPANG00000005175) RHPN1 (ENSPANG00000015006) #27 TOP1MT (ENSPANG00000009180) #28 ENSPANG00000015054 ENSPANG00000039338 GLI4 (ENSPANG00000024747) #30 ZFP41 (ENSPANG00000037562) GPIHBP1 (ENSPANG00000005805) #31 LY6H (ENSPANG00000034240) #32 LY6L (ENSPANG00000005806) #33 ENSPANG00000016456 ##31 Cercopithecinae_d ANCESTRAL SPECIES 72 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 ENSGT00940000163354.b #36 Sooty mangabey MODERN SPECIES 586 GRINA (ENSCATG00000012069) PARP10 (ENSCATG00000025822) PLEC (ENSCATG00000009349) NRBP2 (ENSCATG00000044935) PUF60 (ENSCATG00000035405) SCRIB (ENSCATG00000033327) IQANK1 (ENSCATG00000030464) FAM83H (ENSCATG00000033419) #15 MAPK15 (ENSCATG00000041893) #16 CCDC166 (ENSCATG00000032293) #17 ZNF707 (ENSCATG00000010870) #18 GFUS (ENSCATG00000031930) #19 PYCR3 (ENSCATG00000031176) #20 TIGD5 (ENSCATG00000021269) ENSCATG00000016345 #21 EEF1D (ENSCATG00000028384) #22 NAPRT (ENSCATG00000031974) #23 MROH6 (ENSCATG00000024483) #24 GSDMD (ENSCATG00000039575) #25 ZC3H3 (ENSCATG00000020900) #26 MAFA (ENSCATG00000018551) RHPN1 (ENSCATG00000035749) #27 TOP1MT (ENSCATG00000034601) #28 ZNF696 (ENSCATG00000035107) #29 GLI4 (ENSCATG00000030911) #30 GPIHBP1 (ENSCATG00000016535) #31 LY6H (ENSCATG00000030434) #32 LY6L (ENSCATG00000039618) #33 ENSCATG00000041488 #34 ENSCATG00000043160 #35 CYP11B2 (ENSCATG00000016834) #36 Drill MODERN SPECIES 535 GPAA1 (ENSMLEG00000040321) EXOSC4 (ENSMLEG00000041197) OPLAH (ENSMLEG00000040346) SPATC1 (ENSMLEG00000040406) GRINA (ENSMLEG00000043230) PARP10 (ENSMLEG00000024662) PLEC (ENSMLEG00000033296) NRBP2 (ENSMLEG00000033351) PUF60 (ENSMLEG00000040009) SCRIB (ENSMLEG00000043290) ENSMLEG00000035902 #13 MAPK15 (ENSMLEG00000039072) #16 ZNF707 (ENSMLEG00000025734) #18 GFUS (ENSMLEG00000042551) #19 PYCR3 (ENSMLEG00000009279) #20 EEF1D (ENSMLEG00000042065) #22 NAPRT (ENSMLEG00000039829) #23 MROH6 (ENSMLEG00000033299) #24 GSDMD (ENSMLEG00000027929) #25 ZC3H3 (ENSMLEG00000038139) #26 RHPN1 (ENSMLEG00000003248) #27 TOP1MT (ENSMLEG00000037543) #28 ENSMLEG00000039180 GLI4 (ENSMLEG00000030642) #30 GPIHBP1 (ENSMLEG00000008328) #31 LY6H (ENSMLEG00000041923) #32 LY6L (ENSMLEG00000043236) #33 ENSMLEG00000004140 #34 CYP11B2 (ENSMLEG00000040702) #36 CYP11B1 (ENSMLEG00000040431) #37 GML (ENSMLEG00000039887) Hominoidea ANCESTRAL SPECIES 14 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000012147 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 Gibbon MODERN SPECIES 6 ENSNLEG00000002439 PARP10 (ENSNLEG00000002423) PLEC (ENSNLEG00000031418) NRBP2 (ENSNLEG00000002327) PUF60 (ENSNLEG00000002156) SCRIB (ENSNLEG00000002144) ENSNLEG00000031433 ENSNLEG00000002142 #15 ENSNLEG00000002132 #16 CCDC166 (ENSNLEG00000002128) #17 ENSNLEG00000002119 ZNF707 (ENSNLEG00000002107) #18 ZNF623 (ENSNLEG00000018234) GFUS (ENSNLEG00000002031) #19 PYCR3 (ENSNLEG00000001984) #20 ENSNLEG00000001832 #22 NAPRT (ENSNLEG00000001703) #23 ENSNLEG00000001683 #25 ZC3H3 (ENSNLEG00000001681) #26 ENSNLEG00000001669 #27 TOP1MT (ENSNLEG00000001489) #28 ZNF696 (ENSNLEG00000029578) #29 ENSNLEG00000028782 ENSNLEG00000001483 GPIHBP1 (ENSNLEG00000028934) #31 LY6H (ENSNLEG00000001451) #32 LY6L (ENSNLEG00000031924) #33 ENSNLEG00000001383 #34 GML (ENSNLEG00000001366) LY6D (ENSNLEG00000001345) LYNX1 (ENSNLEG00000028053) Hominidae ANCESTRAL SPECIES 15 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000161627.a.a.a.a.a.b.b.a.b #14 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000012147 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 Orangutan MODERN SPECIES 21 ENSPPYG00000018956 PARP10 (ENSPPYG00000018955) PLEC (ENSPPYG00000038974) NRBP2 (ENSPPYG00000018952) PUF60 (ENSPPYG00000018951) IQANK1 (ENSPPYG00000018949) FAM83H (ENSPPYG00000018947) #15 ENSPPYG00000030192 #14 MAPK15 (ENSPPYG00000018946) #16 CCDC166 (ENSPPYG00000018945) #17 ZNF707 (ENSPPYG00000018943) #18 ZNF623 (ENSPPYG00000018942) GFUS (ENSPPYG00000018941) #19 PYCR3 (ENSPPYG00000018940) #20 TIGD5 (ENSPPYG00000018939) EEF1D (ENSPPYG00000018938) #22 NAPRT (ENSPPYG00000018937) #23 MROH6 (ENSPPYG00000018936) #24 GSDMD (ENSPPYG00000029535) #25 ZC3H3 (ENSPPYG00000018935) #26 ENSPPYG00000030087 ENSPPYG00000035925 RHPN1 (ENSPPYG00000018934) #27 TOP1MT (ENSPPYG00000018932) #28 ZNF696 (ENSPPYG00000019035) #29 GLI4 (ENSPPYG00000018931) #30 ZFP41 (ENSPPYG00000030553) GPIHBP1 (ENSPPYG00000018930) #31 LY6H (ENSPPYG00000018929) #32 LY6L (ENSPPYG00000037893) #33 ENSPPYG00000018927 #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000161627.a.a.a.a.a.b.b.a.b #14 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000012147 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000012147 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 Pan ANCESTRAL SPECIES 11 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00390000012147 ENSGT00940000164666 #18 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00910000147266 #21 ENSGT00950000183014.f.b.a.a.t.g.b.a #22 ENSGT00940000153456.a #23 ENSGT00940000174554 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00910000147225 #34 ENSGT00910000147217 #35 Chimpanzee MODERN SPECIES 21 PLEC (ENSPTRG00000020672) NRBP2 (ENSPTRG00000020671) PUF60 (ENSPTRG00000020670) ENSPTRG00000020669 ENSPTRG00000049773 #13 ENSPTRG00000047274 FAM83H (ENSPTRG00000030909) #15 MAPK15 (ENSPTRG00000020666) #16 CCDC166 (ENSPTRG00000049538) #17 ENSPTRG00000020665 ZNF707 (ENSPTRG00000020664) #18 GFUS (ENSPTRG00000020662) #19 PYCR3 (ENSPTRG00000020661) #20 TIGD5 (ENSPTRG00000030911) ENSPTRG00000050786 #21 EEF1D (ENSPTRG00000020660) #22 NAPRT (ENSPTRG00000020659) #23 ENSPTRG00000049346 GSDMD (ENSPTRG00000020656) #25 ZC3H3 (ENSPTRG00000020655) #26 MAFA (ENSPTRG00000030912) RHPN1 (ENSPTRG00000020654) #27 TOP1MT (ENSPTRG00000020653) #28 ZNF696 (ENSPTRG00000020652) #29 GLI4 (ENSPTRG00000020650) #30 ZFP41 (ENSPTRG00000040000) GPIHBP1 (ENSPTRG00000044147) #31 LY6H (ENSPTRG00000020648) #32 LY6L (ENSPTRG00000045440) #33 LY6E (ENSPTRG00000020645) #34 ENSPTRG00000049280 #35 Bonobo MODERN SPECIES 21 PLEC (ENSPPAG00000042112) ENSPPAG00000038699 NRBP2 (ENSPPAG00000032022) PUF60 (ENSPPAG00000029933) SCRIB (ENSPPAG00000029327) IQANK1 (ENSPPAG00000031397) FAM83H (ENSPPAG00000042173) #15 MAPK15 (ENSPPAG00000037186) #16 ENSPPAG00000042682 #17 ENSPPAG00000041351 ZNF707 (ENSPPAG00000037301) #18 GFUS (ENSPPAG00000029780) #19 PYCR3 (ENSPPAG00000028398) #20 TIGD5 (ENSPPAG00000028001) ENSPPAG00000027883 #21 EEF1D (ENSPPAG00000019348) #22 ENSPPAG00000041905 GSDMD (ENSPPAG00000038919) #25 ZC3H3 (ENSPPAG00000035455) #26 RHPN1 (ENSPPAG00000003585) #27 ENSPPAG00000034530 #28 ZNF696 (ENSPPAG00000038820) #29 ENSPPAG00000038395 ZFP41 (ENSPPAG00000003426) GPIHBP1 (ENSPPAG00000033949) #31 LY6H (ENSPPAG00000043221) #32 LY6L (ENSPPAG00000033665) #33 ENSPPAG00000038973 #34 ENSPPAG00000037628 #35 CYP11B2 (ENSPPAG00000035728) #36 CYP11B1 (ENSPPAG00000011472) #36 Human MODERN SPECIES 20 PARP10 (ENSG00000178685) PLEC (ENSG00000178209) EPPK1 (ENSG00000261150) NRBP2 (ENSG00000185189) PUF60 (ENSG00000179950) SCRIB (ENSG00000180900) IQANK1 (ENSG00000203499) FAM83H (ENSG00000180921) #15 MAPK15 (ENSG00000181085) #16 CCDC166 (ENSG00000255181) #17 ZNF707 (ENSG00000181135) #18 ZNF623 (ENSG00000183309) GFUS (ENSG00000104522) #19 PYCR3 (ENSG00000104524) #20 TIGD5 (ENSG00000179886) EEF1D (ENSG00000104529) #22 NAPRT (ENSG00000147813) #23 MROH6 (ENSG00000204839) #24 GSDMD (ENSG00000104518) #25 ZC3H3 (ENSG00000014164) #26 MAFA (ENSG00000182759) RHPN1 (ENSG00000158106) #27 TOP1MT (ENSG00000184428) #28 ZNF696 (ENSG00000185730) #29 GLI4 (ENSG00000250571) #30 ENSG00000264668 ZFP41 (ENSG00000181638) GPIHBP1 (ENSG00000277494) #31 LY6H (ENSG00000176956) #32 LY6L (ENSG00000261667) #33 LY6S (ENSG00000291309) #33 Gorilla MODERN SPECIES 21 PLEC (ENSGGOG00000012217) NRBP2 (ENSGGOG00000004652) PUF60 (ENSGGOG00000004646) SCRIB (ENSGGOG00000004635) ENSGGOG00000036169 #13 FAM83H (ENSGGOG00000007910) #15 ENSGGOG00000040538 #14 MAPK15 (ENSGGOG00000007904) #16 CCDC166 (ENSGGOG00000023615) #17 ENSGGOG00000012826 ZNF707 (ENSGGOG00000012835) #18 ZNF623 (ENSGGOG00000005440) GFUS (ENSGGOG00000002394) #19 PYCR3 (ENSGGOG00000002393) #20 TIGD5 (ENSGGOG00000002392) EEF1D (ENSGGOG00000002389) #22 MROH6 (ENSGGOG00000025090) #24 GSDMD (ENSGGOG00000006736) #25 ZC3H3 (ENSGGOG00000002833) #26 RHPN1 (ENSGGOG00000005716) #27 TOP1MT (ENSGGOG00000009313) #28 ZNF696 (ENSGGOG00000036666) #29 GLI4 (ENSGGOG00000009307) #30 ZFP41 (ENSGGOG00000040394) GPIHBP1 (ENSGGOG00000039919) #31 ENSGGOG00000001927 #32 LY6L (ENSGGOG00000024829) #33 ENSGGOG00000001273 #34 CYP11B2 (ENSGGOG00000007547) #36 LY6D (ENSGGOG00000016770) LYNX1 (ENSGGOG00000040970) Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Mas night monkey MODERN SPECIES 527 NNMT (ENSANAG00000032401) C11orf71 (ENSANAG00000034041) ENSANAG00000031879 ENSANAG00000020834 NXPE1 (ENSANAG00000023027) NXPE2 (ENSANAG00000022914) ENSANAG00000006922 CADM1 (ENSANAG00000022822) BUD13 (ENSANAG00000035220) ZPR1 (ENSANAG00000026351) APOA5 (ENSANAG00000030524) APOA4 (ENSANAG00000033961) APOC3 (ENSANAG00000033515) APOA1 (ENSANAG00000034411) SIK3 (ENSANAG00000037756) ENSANAG00000025519 ##22 ENSANAG00000035938 PAFAH1B2 (ENSANAG00000023275) SIDT2 (ENSANAG00000031713) ENSANAG00000038268 PCSK7 (ENSANAG00000035257) RNF214 (ENSANAG00000023817) ENSANAG00000033055 BACE1 (ENSANAG00000027782) CEP164 (ENSANAG00000023776) DSCAML1 (ENSANAG00000028528) ENSANAG00000030698 FXYD6 (ENSANAG00000037013) TMPRSS13 (ENSANAG00000021105) IL10RA (ENSANAG00000035211) SMIM35 (ENSANAG00000022850) Cebidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Bolivian squirrel monkey MODERN SPECIES 50 NXPE1 (ENSSBOG00000027065) NXPE4 (ENSSBOG00000023862) NXPE2 (ENSSBOG00000022260) ENSSBOG00000034681 CADM1 (ENSSBOG00000035201) ENSSBOG00000034680 BUD13 (ENSSBOG00000033988) ZPR1 (ENSSBOG00000018045) APOA5 (ENSSBOG00000034615) APOA4 (ENSSBOG00000034589) APOC3 (ENSSBOG00000029645) APOA1 (ENSSBOG00000027691) ENSSBOG00000019734 SIK3 (ENSSBOG00000033875) ENSSBOG00000018305 ENSSBOG00000031628 ##22 ENSSBOG00000028394 PAFAH1B2 (ENSSBOG00000031801) SIDT2 (ENSSBOG00000032213) ENSSBOG00000024274 PCSK7 (ENSSBOG00000034009) RNF214 (ENSSBOG00000021520) ENSSBOG00000014464 BACE1 (ENSSBOG00000035674) CEP164 (ENSSBOG00000020901) ENSSBOG00000024881 DSCAML1 (ENSSBOG00000019573) FXYD2 (ENSSBOG00000033109) FXYD6 (ENSSBOG00000025645) TMPRSS13 (ENSSBOG00000031082) IL10RA (ENSSBOG00000031462) Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.h ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000163669 ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00910000146838 ENSGT00940000158892.b ENSGT00390000016408 ENSGT00390000006976 ENSGT00940000159597 Hominoidea ANCESTRAL SPECIES 70 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.c.b.a ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Hominidae ANCESTRAL SPECIES 63 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.c.b.a ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148.n ENSGT00910000148179 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00940000158892.b ENSGT00390000016408 ENSGT00390000006976 ENSGT00940000159597 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.c.b.a ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000164347.a.b ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT01030000235189 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000011897 ENSGT00390000004860.`b ENSGT00550000074921 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 Gorilla MODERN SPECIES 22 ENSGGOG00000024707 ENSGGOG00000012440 BARX1 (ENSGGOG00000010464) PHF2 (ENSGGOG00000004414) ENSGGOG00000040022 FAM120A (ENSGGOG00000003353) FAM120AOS (ENSGGOG00000003350) ENSGGOG00000023715 WNK2 (ENSGGOG00000014387) NINJ1 (ENSGGOG00000023536) CARD19 (ENSGGOG00000016790) SUSD3 (ENSGGOG00000008917) FGD3 (ENSGGOG00000008907) ENSGGOG00000024533 ZNF484 (ENSGGOG00000014338) ENSGGOG00000039723 ##22 ENSGGOG00000024094 BICD2 (ENSGGOG00000015374) IPPK (ENSGGOG00000003922) ECM2 (ENSGGOG00000013631) ASPN (ENSGGOG00000001968) OMD (ENSGGOG00000042300) OGN (ENSGGOG00000006202) CENPP (ENSGGOG00000041456) NOL8 (ENSGGOG00000025612) IARS1 (ENSGGOG00000010212) ENSGGOG00000027824 SPTLC1 (ENSGGOG00000001662) ROR2 (ENSGGOG00000011571) NFIL3 (ENSGGOG00000001317) AUH (ENSGGOG00000003824) Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148.n ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00940000158892.b ENSGT00390000016408 ENSGT00390000006976 ENSGT00940000159597 ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000164347.a.b ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT01030000235189 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000011897 ENSGT00390000004860.`b ENSGT00550000074921 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 Pan ANCESTRAL SPECIES 18 ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148.n ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00940000158892.b ENSGT00390000016408 ENSGT00390000006976 ENSGT00940000159597 ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000164347.a.b ENSGT00940000154471.a.b.a.a ENSGT00390000010053 ENSGT01030000235189 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238 ENSGT00390000011897 ENSGT00390000004860.`b ENSGT00550000074921 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 Bonobo MODERN SPECIES 22 FBP2 (ENSPPAG00000034055) MFSD14B (ENSPPAG00000025011) ZNF169 (ENSPPAG00000037304) PTPDC1 (ENSPPAG00000036709) ENSPPAG00000028799 PHF2 (ENSPPAG00000038271) FAM120A (ENSPPAG00000010221) FAM120AOS (ENSPPAG00000036180) ENSPPAG00000040654 WNK2 (ENSPPAG00000041184) NINJ1 (ENSPPAG00000036288) CARD19 (ENSPPAG00000033925) SUSD3 (ENSPPAG00000037775) FGD3 (ENSPPAG00000029151) ZNF484 (ENSPPAG00000035433) ENSPPAG00000028490 ##22 ENSPPAG00000033761 BICD2 (ENSPPAG00000035524) IPPK (ENSPPAG00000038389) ENSPPAG00000032243 ECM2 (ENSPPAG00000033779) ASPN (ENSPPAG00000034885) OMD (ENSPPAG00000043113) OGN (ENSPPAG00000041088) ENSPPAG00000040967 NOL8 (ENSPPAG00000002204) IARS1 (ENSPPAG00000027754) ENSPPAG00000042642 ROR2 (ENSPPAG00000034590) NFIL3 (ENSPPAG00000007216) ENSPPAG00000038663 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.h ENSGT00510000048363.f ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00530000069333.a ENSGT00940000160228 ENSGT00940000163669 ENSGT00390000013988 ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00940000165911 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00910000146838 ENSGT00940000158892.b ENSGT00390000016408 ENSGT00390000006976 Rhinopithecus ANCESTRAL SPECIES 262 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.l ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 ENSGT00940000161564 ENSGT00940000161440 ENSGT00390000005732.u.b ENSGT00940000157257 ENSGT00940000157614 ENSGT00950000183061.a.a.b ENSGT00550000075006 ENSGT00940000154934.B.r Golden snub-nosed monkey MODERN SPECIES 42 ENSRROG00000028037 ##22 Black snub-nosed monkey MODERN SPECIES 2812 VMO1 (ENSRBIG00000041775) TM4SF5 (ENSRBIG00000038903) ZMYND15 (ENSRBIG00000036881) CXCL16 (ENSRBIG00000031772) KATNAL1 (ENSRBIG00000028331) ENSRBIG00000036132 ENSRBIG00000031662 ENSRBIG00000028677 USPL1 (ENSRBIG00000040279) ALOX5AP (ENSRBIG00000042429) MEDAG (ENSRBIG00000034036) TEX26 (ENSRBIG00000040045) HSPH1 (ENSRBIG00000034746) B3GLCT (ENSRBIG00000031350) RXFP2 (ENSRBIG00000040744) ENSRBIG00000043859 ##22 FRY (ENSRBIG00000043302) ZAR1L (ENSRBIG00000028694) ENSRBIG00000001621 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.h ENSGT00510000048363.f ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.D ENSGT00910000147193 ENSGT00940000164347 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000163669 ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00940000165911 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00910000146838 ENSGT00940000158892.b ENSGT00390000016408 ENSGT00390000006976 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00510000048363.f ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.B ENSGT00940000164347 ENSGT00530000069333.a ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.a ENSGT00940000163669 ENSGT00910000147042 ENSGT00910000147065 ENSGT00390000013988 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.b ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT01030000235462.f ENSGT00940000163510.D ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00940000165911 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00910000146838 ENSGT00940000158892.b Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.h ENSGT00510000048363.e.b ENSGT00510000048363.f ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.B ENSGT00940000164347 ENSGT00530000069333.a ENSGT00940000160228.x ENSGT00940000163669 ENSGT00950000183043.a.b.b.a.a.a.a.a.a.a.b ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT01030000235462.f ENSGT00940000163510.D ENSGT00940000156081 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00940000165911 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00530000063168.a.b ENSGT00940000157161.b ENSGT00910000146838 ENSGT00940000158892.b Cercopithecinae_d ANCESTRAL SPECIES 108 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.h ENSGT00510000048363.e.a.a ENSGT00940000163051 ENSGT00940000154367.a ENSGT01050000245888.a ENSGT00530000069333.a ENSGT00940000160228.x ENSGT00940000163669 ENSGT00940000163284 ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00940000163510.D ENSGT00940000156081 ENSGT01070000253921 ENSGT00410000025793.b.t ENSGT00940000163169 ENSGT00940000165911 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00390000001747 ENSGT00940000157161.b ENSGT00910000146838 ENSGT00940000158892.b ENSGT00390000016408 Drill MODERN SPECIES 1300 ZNF484 (ENSMLEG00000044239) ENSMLEG00000030855 ##22 ANKRD18B (ENSMLEG00000029807) MFSD14B (ENSMLEG00000023524) ENSMLEG00000031860 ENSMLEG00000021166 ZNF169 (ENSMLEG00000034320) ENSMLEG00000036439 PTPDC1 (ENSMLEG00000040640) ENSMLEG00000026177 PHF2 (ENSMLEG00000032168) FAM120A (ENSMLEG00000032432) ENSMLEG00000030142 ENSMLEG00000031171 Sooty mangabey MODERN SPECIES 109 ZNF367 (ENSCATG00000042183) HABP4 (ENSCATG00000040518) ENSCATG00000021520 ENSCATG00000037256 ENSCATG00000034172 ZNF782 (ENSCATG00000015893) CTSV (ENSCATG00000037585) ANKRD18B (ENSCATG00000027085) FAM240B (ENSCATG00000044157) ENSCATG00000035993 ZNF658 (ENSCATG00000032510) ENSCATG00000019926 ENSCATG00000019880 ENSCATG00000030028 ZNF484 (ENSCATG00000029970) ENSCATG00000038654 ##22 ENSCATG00000031931 MFSD14B (ENSCATG00000032863) ENSCATG00000030909 ENSCATG00000029814 ZNF169 (ENSCATG00000029989) ENSCATG00000029352 PTPDC1 (ENSCATG00000026513) BARX1 (ENSCATG00000039569) PHF2 (ENSCATG00000034594) FAM120A (ENSCATG00000040279) FAM120AOS (ENSCATG00000030006) ENSCATG00000020631 WNK2 (ENSCATG00000041310) ENSCATG00000036089 NINJ1 (ENSCATG00000037674) Macaca ANCESTRAL SPECIES 19 ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ENSGT00950000183120.e.b.a.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 ENSGT00950000183061.a.a.b ENSGT00550000075006 ENSGT00940000154934.B ENSGT01050000244827.C.c.a.b ENSGT00940000154956 ENSGT00910000147726 ENSGT00390000016050 ENSGT00390000011174 Pig-tailed macaque MODERN SPECIES 125 UBL3 (ENSMNEG00000044962) KATNAL1 (ENSMNEG00000036195) ENSMNEG00000039963 HMGB1 (ENSMNEG00000028891) USPL1 (ENSMNEG00000034203) ALOX5AP (ENSMNEG00000043933) MEDAG (ENSMNEG00000033678) TEX26 (ENSMNEG00000027388) HSPH1 (ENSMNEG00000032386) B3GLCT (ENSMNEG00000035100) RXFP2 (ENSMNEG00000032879) FRY (ENSMNEG00000030299) ENSMNEG00000033135 ##22 ZAR1L (ENSMNEG00000029527) BRCA2 (ENSMNEG00000036002) N4BP2L1 (ENSMNEG00000039181) ENSMNEG00000035638 PDS5B (ENSMNEG00000043516) KL (ENSMNEG00000043961) STARD13 (ENSMNEG00000034305) RFC3 (ENSMNEG00000032691) NBEA (ENSMNEG00000028837) ENSMNEG00000014654 MAB21L1 (ENSMNEG00000013264) DCLK1 (ENSMNEG00000028724) ENSMNEG00000045366 SOHLH2 (ENSMNEG00000038071) CCDC169 (ENSMNEG00000045062) Macaca_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.b.b ##22 Crab-eating macaque MODERN SPECIES 11 PLXNA1 (ENSMFAG00000037368) PRR20G (ENSMFAG00000056785) ENSMFAG00000041353 TPRA1 (ENSMFAG00000038337) MCM2 (ENSMFAG00000021368) PODXL2 (ENSMFAG00000003876) ABTB1 (ENSMFAG00000033156) MGLL (ENSMFAG00000033079) KBTBD12 (ENSMFAG00000007505) SEC61A1 (ENSMFAG00000043634) RUVBL1 (ENSMFAG00000003301) EEFSEC (ENSMFAG00000042128) DNAJB8 (ENSMFAG00000030291) GATA2 (ENSMFAG00000038603) RPN1 (ENSMFAG00000003642) ENSMFAG00000031120 ##22 ENSMFAG00000054493 RAB7A (ENSMFAG00000050771) ENSMFAG00000057913 ACAD9 (ENSMFAG00000045035) CFAP92 (ENSMFAG00000043199) EFCC1 (ENSMFAG00000046117) ##22 ENSMFAG00000064038 ##14 RAB43 (ENSMFAG00000040013) ISY1 (ENSMFAG00000061497) CNBP (ENSMFAG00000030262) COPG1 (ENSMFAG00000031940) HMCES (ENSMFAG00000032291) ENSMFAG00000040136 IFT122 (ENSMFAG00000030257) RHO (ENSMFAG00000004044) Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Golden snub-nosed monkey MODERN SPECIES 1676 ENSRROG00000043551 KCNH1 (ENSRROG00000012202) RCOR3 (ENSRROG00000040449) TRAF5 (ENSRROG00000035255) ENSRROG00000000056 ##22 ENSRROG00000033555 RD3 (ENSRROG00000041409) SLC30A1 (ENSRROG00000045714) NEK2 (ENSRROG00000030544) ENSRROG00000023261 LPGAT1 (ENSRROG00000036627) INTS7 (ENSRROG00000039254) DTL (ENSRROG00000029896) PPP2R5A (ENSRROG00000025443) PACC1 (ENSRROG00000033809) Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Macaca ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Pig-tailed macaque MODERN SPECIES 546 ENSMNEG00000032232 TPRA1 (ENSMNEG00000030541) MCM2 (ENSMNEG00000034425) PODXL2 (ENSMNEG00000035933) ABTB1 (ENSMNEG00000045566) MGLL (ENSMNEG00000038846) KBTBD12 (ENSMNEG00000031241) SEC61A1 (ENSMNEG00000001390) RUVBL1 (ENSMNEG00000030256) ENSMNEG00000023174 EEFSEC (ENSMNEG00000028574) DNAJB8 (ENSMNEG00000011913) GATA2 (ENSMNEG00000029290) ENSMNEG00000030117 RPN1 (ENSMNEG00000023826) ENSMNEG00000040171 ##22 ENSMNEG00000014307 RAB7A (ENSMNEG00000033473) ENSMNEG00000015696 ACAD9 (ENSMNEG00000040449) ENSMNEG00000031067 ENSMNEG00000029835 EFCC1 (ENSMNEG00000040739) ##22 GP9 (ENSMNEG00000008633) RAB43 (ENSMNEG00000029051) ISY1 (ENSMNEG00000043206) CNBP (ENSMNEG00000028473) COPG1 (ENSMNEG00000033067) HMCES (ENSMNEG00000042145) H1-10 (ENSMNEG00000025518) EFCAB12 (ENSMNEG00000030732) Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.a ##22 Bolivian squirrel monkey MODERN SPECIES 195 OPLAH (ENSSBOG00000026688) SPATC1 (ENSSBOG00000027237) GRINA (ENSSBOG00000030490) PARP10 (ENSSBOG00000008301) PLEC (ENSSBOG00000025259) NRBP2 (ENSSBOG00000020976) PUF60 (ENSSBOG00000027089) SCRIB (ENSSBOG00000004113) IQANK1 (ENSSBOG00000029170) FAM83H (ENSSBOG00000024735) #15 MAPK15 (ENSSBOG00000034417) #16 ZNF707 (ENSSBOG00000019215) #18 ZNF623 (ENSSBOG00000036321) GFUS (ENSSBOG00000028067) #19 PYCR3 (ENSSBOG00000029869) #20 ENSSBOG00000024169 ##22 NAPRT (ENSSBOG00000028440) #23 MROH6 (ENSSBOG00000019750) #24 GSDMD (ENSSBOG00000002449) #25 ZC3H3 (ENSSBOG00000021819) #26 RHPN1 (ENSSBOG00000003916) #27 ZNF696 (ENSSBOG00000027878) #29 ENSSBOG00000019065 GPIHBP1 (ENSSBOG00000031715) #31 LY6H (ENSSBOG00000020986) #32 LY6L (ENSSBOG00000028358) #33 LY6E (ENSSBOG00000030917) ##31 CYP11B1 (ENSSBOG00000027746) #36 GML (ENSSBOG00000012474) LY6D (ENSSBOG00000025955) LYNX1 (ENSSBOG00000024857) Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b ##22 Rhinopithecus ANCESTRAL SPECIES 15 ENSGT00940000161192 ENSGT00500000045299 ENSGT00530000063626.a ENSGT00390000010089.f ENSGT00940000155807.a ENSGT00950000182990.a.a.b.b ENSGT00950000182990.a.a.a.b.u.a ENSGT00950000183316 ENSGT00910000147498 ENSGT00950000182990.a.a.a.b.u.b ENSGT00940000159102 ENSGT00940000158650 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ENSGT00730000111073 ENSGT00950000183014.f.b.a.a.t.g.a.b ##22 ENSGT00530000063866.d ENSGT00390000013802.v.b.d ENSGT00530000063866.c.a ENSGT00390000013802.v.b.c ENSGT00530000063866.c.b ENSGT00940000153052.c.a.a.a ENSGT00950000183045.A.a.a ENSGT01090000263362 ENSGT00940000154902.bb.b ENSGT00390000007552.f.x.y.a ENSGT00390000007552.f.x.y.b ENSGT00940000159914 ENSGT01030000234573.B.c.b.b ENSGT00940000159589 ENSGT00940000159921 Golden snub-nosed monkey MODERN SPECIES 2511 DAGLA (ENSRROG00000000749) ENSRROG00000041185 MYRF (ENSRROG00000042444) ENSRROG00000043536 FEN1 (ENSRROG00000018718) FADS1 (ENSRROG00000034617) ENSRROG00000035548 FADS2 (ENSRROG00000040657) ENSRROG00000020489 FADS3 (ENSRROG00000037612) RAB3IL1 (ENSRROG00000013229) BEST1 (ENSRROG00000034577) ENSRROG00000030005 INCENP (ENSRROG00000030466) ENSRROG00000023884 ENSRROG00000036187 ##22 SCGB1D1 (ENSRROG00000036655) SCGB2A1 (ENSRROG00000044015) SCGB1D2 (ENSRROG00000031331) ENSRROG00000044482 SCGB1D4 (ENSRROG00000039995) ASRGL1 (ENSRROG00000031523) ENSRROG00000045117 AHNAK (ENSRROG00000044889) ENSRROG00000042836 TUT1 (ENSRROG00000043315) MTA2 (ENSRROG00000044052) EML3 (ENSRROG00000043037) ROM1 (ENSRROG00000033061) B3GAT3 (ENSRROG00000029771) GANAB (ENSRROG00000037256) Black snub-nosed monkey MODERN SPECIES 600 ENSRBIG00000031119 DAGLA (ENSRBIG00000036039) ENSRBIG00000035052 MYRF (ENSRBIG00000036200) TMEM258 (ENSRBIG00000041933) FEN1 (ENSRBIG00000014908) FADS1 (ENSRBIG00000037740) ENSRBIG00000031562 FADS2 (ENSRBIG00000043060) ENSRBIG00000023735 FADS3 (ENSRBIG00000035575) RAB3IL1 (ENSRBIG00000013414) BEST1 (ENSRBIG00000027850) FTH1 (ENSRBIG00000044604) INCENP (ENSRBIG00000040656) ENSRBIG00000038214 ##22 SCGB1D1 (ENSRBIG00000034273) SCGB2A1 (ENSRBIG00000041379) SCGB1D2 (ENSRBIG00000032475) ENSRBIG00000039690 SCGB1D4 (ENSRBIG00000044615) ENSRBIG00000026802 ENSRBIG00000027474 ASRGL1 (ENSRBIG00000008615) ENSRBIG00000037491 ENSRBIG00000032801 ENSRBIG00000042208 TUT1 (ENSRBIG00000021240) MTA2 (ENSRBIG00000038336) EML3 (ENSRBIG00000029464) ROM1 (ENSRBIG00000033282) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b.a ##22 Mas night monkey MODERN SPECIES 602 ENSANAG00000021967 FAM135B (ENSANAG00000024544) COL22A1 (ENSANAG00000028860) KCNK9 (ENSANAG00000020788) TRAPPC9 (ENSANAG00000023163) CHRAC1 (ENSANAG00000032245) AGO2 (ENSANAG00000027399) PTK2 (ENSANAG00000035429) DENND3 (ENSANAG00000031248) SLC45A4 (ENSANAG00000032643) ZNF623 (ENSANAG00000028785) ENSANAG00000028633 #19 PYCR3 (ENSANAG00000025985) #20 ENSANAG00000019322 ##22 NAPRT (ENSANAG00000031068) #23 MROH6 (ENSANAG00000034518) #24 GSDMD (ENSANAG00000019900) #25 ZC3H3 (ENSANAG00000018742) #26 MAFA (ENSANAG00000021123) RHPN1 (ENSANAG00000022794) #27 ZNF696 (ENSANAG00000019329) #29 GLI4 (ENSANAG00000016700) #30 GPIHBP1 (ENSANAG00000021409) #31 Cebidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b.a ##22 Bolivian squirrel monkey MODERN SPECIES 101 ENSSBOG00000035325 ENSSBOG00000028859 SERAC1 (ENSSBOG00000027520) SYNJ2 (ENSSBOG00000034876) SNX9 (ENSSBOG00000025360) ENSSBOG00000031411 ENSSBOG00000028951 ZDHHC14 (ENSSBOG00000025348) TMEM242 (ENSSBOG00000035724) ARID1B (ENSSBOG00000026093) NOX3 (ENSSBOG00000026568) CLDN20 (ENSSBOG00000018025) TFB1M (ENSSBOG00000008663) TIAM2 (ENSSBOG00000035015) SCAF8 (ENSSBOG00000027023) ENSSBOG00000030903 ##22 CNKSR3 (ENSSBOG00000032255) IPCEF1 (ENSSBOG00000035077) OPRM1 (ENSSBOG00000026674) RGS17 (ENSSBOG00000001068) MTRF1L (ENSSBOG00000024984) FBXO5 (ENSSBOG00000022349) VIP (ENSSBOG00000027960) MYCT1 (ENSSBOG00000027156) SYNE1 (ENSSBOG00000023809) ENSSBOG00000033348 ENSSBOG00000027653 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b.b ##22 Mas night monkey MODERN SPECIES 966 SNX2 (ENSANAG00000023132) ENSANAG00000026792 SNCAIP (ENSANAG00000023615) ENSANAG00000026917 LOX (ENSANAG00000022215) SRFBP1 (ENSANAG00000022485) PRR16 (ENSANAG00000022482) ENSANAG00000022201 FAM170A (ENSANAG00000022413) HSD17B4 (ENSANAG00000026074) TNFAIP8 (ENSANAG00000023898) DMXL1 (ENSANAG00000028002) ENSANAG00000022169 ENSANAG00000026934 ENSANAG00000024770 ENSANAG00000024194 ##22 SEMA6A (ENSANAG00000025286) ENSANAG00000026968 ENSANAG00000025676 COMMD10 (ENSANAG00000022465) ENSANAG00000024151 ENSANAG00000023278 ARL14EPL (ENSANAG00000023687) LVRN (ENSANAG00000027157) ENSANAG00000023676 ATG12 (ENSANAG00000023055) CDO1 (ENSANAG00000025385) KLHL25 (ENSANAG00000018034) AKAP13 (ENSANAG00000027868) PDE8A (ENSANAG00000024243) SLC28A1 (ENSANAG00000026896) Cebidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.g.a.b.b ##22 Cebidae_a ANCESTRAL SPECIES 58 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681.c #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t.g.a.b.b ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354.e #36 ENSGT00940000163354.f #36 ENSGT00940000159966.A Capuchin MODERN SPECIES 449 GRINA (ENSCCAG00000026069) PARP10 (ENSCCAG00000024610) PLEC (ENSCCAG00000031237) NRBP2 (ENSCCAG00000025809) PUF60 (ENSCCAG00000007744) SCRIB (ENSCCAG00000033504) IQANK1 (ENSCCAG00000029082) FAM83H (ENSCCAG00000036028) #15 MAPK15 (ENSCCAG00000022271) #16 CCDC166 (ENSCCAG00000026523) #17 ZNF707 (ENSCCAG00000025927) #18 ZNF623 (ENSCCAG00000013056) GFUS (ENSCCAG00000034200) #19 PYCR3 (ENSCCAG00000024608) #20 TIGD5 (ENSCCAG00000019541) EEF1D (ENSCCAG00000027651) ##22 NAPRT (ENSCCAG00000032035) #23 MROH6 (ENSCCAG00000025194) #24 GSDMD (ENSCCAG00000027541) #25 ZC3H3 (ENSCCAG00000035267) #26 MAFA (ENSCCAG00000031370) RHPN1 (ENSCCAG00000024296) #27 ZNF696 (ENSCCAG00000024698) #29 GLI4 (ENSCCAG00000022001) #30 GPIHBP1 (ENSCCAG00000024326) #31 LY6H (ENSCCAG00000031416) #32 LY6L (ENSCCAG00000008338) #33 LY6E (ENSCCAG00000033715) ##31 CYP11B2 (ENSCCAG00000027823) #36 CYP11B1 (ENSCCAG00000037589) #36 GML (ENSCCAG00000025913) Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h ##22 Catarrhini DUPLICATION Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000155019.a.b ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 ENSGT00390000009937 ENSGT00940000159202 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000155019.a.b ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00940000166511 ENSGT00950000182832.C.c.b ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000155019.a.b ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00940000166511 ENSGT00950000182832.C.c.b ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000155019.a.b ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00860000135711.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00940000166511 ENSGT00950000182832.C.c.b ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00940000155019.a.b ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00860000135711.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369.f ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 ENSGT00390000009937 Cercopithecinae_d ANCESTRAL SPECIES 73 ENSGT00940000155019.a.b ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362.w ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00860000135711.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00940000166511 ENSGT00950000182832.C.c.b ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369.f ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 Drill MODERN SPECIES 1412 ENSMLEG00000039787 ##22 PTPRK (ENSMLEG00000037384) THEMIS (ENSMLEG00000027804) ENSMLEG00000032738 C6orf58 (ENSMLEG00000031416) SOGA3 (ENSMLEG00000038336) KIAA0408 (ENSMLEG00000041594) Sooty mangabey MODERN SPECIES 324 CCN2 (ENSCATG00000035698) ENPP1 (ENSCATG00000033828) ENPP3 (ENSCATG00000044442) MED23 (ENSCATG00000012741) ARG1 (ENSCATG00000037316) AKAP7 (ENSCATG00000029710) EPB41L2 (ENSCATG00000042200) SMLR1 (ENSCATG00000035344) TMEM200A (ENSCATG00000011532) SAMD3 (ENSCATG00000043621) L3MBTL3 (ENSCATG00000006805) TMEM244 (ENSCATG00000003666) ARHGAP18 (ENSCATG00000015436) LAMA2 (ENSCATG00000044746) ENSCATG00000040909 ENSCATG00000036198 ##22 PTPRK (ENSCATG00000034659) ENSCATG00000044707 THEMIS (ENSCATG00000012281) ENSCATG00000037508 C6orf58 (ENSCATG00000037565) SOGA3 (ENSCATG00000037905) KIAA0408 (ENSCATG00000043290) ENSCATG00000022547 ECHDC1 (ENSCATG00000032836) RNF146 (ENSCATG00000031435) RSPO3 (ENSCATG00000045154) CENPW (ENSCATG00000018542) TRMT11 (ENSCATG00000039002) HINT3 (ENSCATG00000031514) NCOA7 (ENSCATG00000037342) Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155070.k.a ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 ENSGT00390000009937 ENSGT00940000159202 Gibbon MODERN SPECIES 18 ENPP1 (ENSNLEG00000014508) ENPP3 (ENSNLEG00000014455) MED23 (ENSNLEG00000014355) ARG1 (ENSNLEG00000014342) ENSNLEG00000032784 AKAP7 (ENSNLEG00000014330) EPB41L2 (ENSNLEG00000014314) SMLR1 (ENSNLEG00000029374) TMEM200A (ENSNLEG00000029901) SAMD3 (ENSNLEG00000014289) L3MBTL3 (ENSNLEG00000036097) TMEM244 (ENSNLEG00000014280) ARHGAP18 (ENSNLEG00000014230) ENSNLEG00000030561 LAMA2 (ENSNLEG00000035043) ENSNLEG00000035822 ##22 PTPRK (ENSNLEG00000014202) THEMIS (ENSNLEG00000014191) C6orf58 (ENSNLEG00000014180) SOGA3 (ENSNLEG00000014168) KIAA0408 (ENSNLEG00000014161) ENSNLEG00000035899 ECHDC1 (ENSNLEG00000014138) RNF146 (ENSNLEG00000014130) RSPO3 (ENSNLEG00000014120) CENPW (ENSNLEG00000028840) TRMT11 (ENSNLEG00000014080) HINT3 (ENSNLEG00000014055) NCOA7 (ENSNLEG00000013998) HEY2 (ENSNLEG00000013972) HDDC2 (ENSNLEG00000013960) Hominidae ANCESTRAL SPECIES 5 ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155070.k.a ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 ENSGT00390000009937 ENSGT00940000159202 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000156034.a ENSGT00940000159640 ENSGT00390000010380 ENSGT00950000183195.b.b ENSGT00390000012756 ENSGT00940000155070.k.a ENSGT00940000155617.B ENSGT00560000078592 ENSGT00530000063698.a.a ENSGT00390000012396 ENSGT00940000159800 ENSGT00940000154347.b.a ENSGT00940000157142 ENSGT00940000155362 ENSGT00510000047602.q.b ENSGT00950000183014.f.b.a.a.t.h.a.a ##22 ENSGT00940000156249 ENSGT00530000063770.c.b ENSGT00390000004904 ENSGT00950000182982.C ENSGT00390000001962 ENSGT00900000143156.b ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT00390000010369 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000155141 ENSGT00940000160636 ENSGT00390000009937 Gorilla MODERN SPECIES 19 ENPP1 (ENSGGOG00000011164) ENPP3 (ENSGGOG00000000982) MED23 (ENSGGOG00000000978) ARG1 (ENSGGOG00000000977) ENSGGOG00000014758 AKAP7 (ENSGGOG00000008778) EPB41L2 (ENSGGOG00000008512) SMLR1 (ENSGGOG00000041207) TMEM200A (ENSGGOG00000013218) SAMD3 (ENSGGOG00000000552) L3MBTL3 (ENSGGOG00000000549) TMEM244 (ENSGGOG00000028517) ARHGAP18 (ENSGGOG00000013519) LAMA2 (ENSGGOG00000004906) ENSGGOG00000040967 ENSGGOG00000023892 ##22 PTPRK (ENSGGOG00000023696) THEMIS (ENSGGOG00000015774) C6orf58 (ENSGGOG00000004604) SOGA3 (ENSGGOG00000000027) KIAA0408 (ENSGGOG00000040771) ENSGGOG00000043826 ECHDC1 (ENSGGOG00000024247) RNF146 (ENSGGOG00000012420) RSPO3 (ENSGGOG00000026099) CENPW (ENSGGOG00000011160) TRMT11 (ENSGGOG00000017016) HINT3 (ENSGGOG00000012610) NCOA7 (ENSGGOG00000016074) ENSGGOG00000002589 HDDC2 (ENSGGOG00000006074) Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.a.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.a.b ##22 Gibbon MODERN SPECIES 1 STEAP4 (ENSNLEG00000015112) SRI (ENSNLEG00000015093) ADAM22 (ENSNLEG00000015048) DBF4 (ENSNLEG00000015022) SLC25A40 (ENSNLEG00000015011) RUNDC3B (ENSNLEG00000014998) ABCB1 (ENSNLEG00000014983) ABCB4 (ENSNLEG00000014973) CROT (ENSNLEG00000014961) TMEM243 (ENSNLEG00000014954) DMTF1 (ENSNLEG00000014921) ELAPOR2 (ENSNLEG00000014894) GRM3 (ENSNLEG00000014888) SEMA3D (ENSNLEG00000014879) SEMA3A (ENSNLEG00000014865) ENSNLEG00000029628 ##22 SEMA3E (ENSNLEG00000014841) ENSNLEG00000031922 ENSNLEG00000034875 ENSNLEG00000036202 ENSNLEG00000033878 CACNA2D1 (ENSNLEG00000014802) HGF (ENSNLEG00000014770) SEMA3C (ENSNLEG00000014747) CD36 (ENSNLEG00000014698) GNAT3 (ENSNLEG00000014686) ENSNLEG00000032307 ENSNLEG00000014626 FLRT3 (ENSNLEG00000034917) MACROD2 (ENSNLEG00000014617) SEL1L2 (ENSNLEG00000014593) Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 23 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.h.b ##22 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 ENSGT00940000161564 ENSGT00940000161440 ENSGT00390000005732.u.b.a ENSGT00940000157257 ENSGT00940000157614 ENSGT00950000183061.a.a.b ENSGT00550000075006 ENSGT01050000244827.C.c.a.b ENSGT00940000154934.B ENSGT00940000154956 ENSGT00390000016050 Gorilla MODERN SPECIES 4 POMP (ENSGGOG00000015316) SLC46A3 (ENSGGOG00000014254) ENSGGOG00000042729 UBL3 (ENSGGOG00000023146) KATNAL1 (ENSGGOG00000026875) ENSGGOG00000024714 UBE2L5 (ENSGGOG00000006857) HMGB1 (ENSGGOG00000026764) USPL1 (ENSGGOG00000004673) ENSGGOG00000013859 MEDAG (ENSGGOG00000009867) TEX26 (ENSGGOG00000016812) HSPH1 (ENSGGOG00000015313) B3GLCT (ENSGGOG00000002840) RXFP2 (ENSGGOG00000002645) ENSGGOG00000023700 ##22 FRY (ENSGGOG00000007253) ZAR1L (ENSGGOG00000015803) BRCA2 (ENSGGOG00000015808) N4BP2L1 (ENSGGOG00000015849) ENSGGOG00000025412 ENSGGOG00000025225 ENSGGOG00000040611 PDS5B (ENSGGOG00000004950) ENSGGOG00000007260 STARD13 (ENSGGOG00000006398) RFC3 (ENSGGOG00000017192) NBEA (ENSGGOG00000011724) ENSGGOG00000037758 MAB21L1 (ENSGGOG00000011768) DCLK1 (ENSGGOG00000006447) Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Pan ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Bonobo MODERN SPECIES 4 SLC7A1 (ENSPPAG00000037016) ENSPPAG00000015303 UBL3 (ENSPPAG00000027496) KATNAL1 (ENSPPAG00000033530) ENSPPAG00000037440 UBE2L5 (ENSPPAG00000032233) ENSPPAG00000030148 USPL1 (ENSPPAG00000032740) ENSPPAG00000033826 MEDAG (ENSPPAG00000035081) TEX26 (ENSPPAG00000008979) HSPH1 (ENSPPAG00000012606) B3GLCT (ENSPPAG00000029099) RXFP2 (ENSPPAG00000031019) FRY (ENSPPAG00000039014) ENSPPAG00000029942 ##22 ZAR1L (ENSPPAG00000036799) BRCA2 (ENSPPAG00000002166) N4BP2L1 (ENSPPAG00000040605) ENSPPAG00000021320 ENSPPAG00000040613 ENSPPAG00000024500 PDS5B (ENSPPAG00000001775) KL (ENSPPAG00000030075) STARD13 (ENSPPAG00000038509) RFC3 (ENSPPAG00000031926) NBEA (ENSPPAG00000001485) MAB21L1 (ENSPPAG00000032980) DCLK1 (ENSPPAG00000038110) SOHLH2 (ENSPPAG00000025183) CCDC169 (ENSPPAG00000029270) Gibbon MODERN SPECIES 24 ENSNLEG00000035615 SLC7A1 (ENSNLEG00000000622) UBL3 (ENSNLEG00000000660) KATNAL1 (ENSNLEG00000000679) ENSNLEG00000000717 UBE2L5 (ENSNLEG00000018657) ENSNLEG00000000720 ENSNLEG00000029269 USPL1 (ENSNLEG00000000756) ENSNLEG00000029333 MEDAG (ENSNLEG00000000801) TEX26 (ENSNLEG00000000809) HSPH1 (ENSNLEG00000000827) B3GLCT (ENSNLEG00000000847) RXFP2 (ENSNLEG00000000880) ENSNLEG00000033077 ##22 FRY (ENSNLEG00000000913) ENSNLEG00000001045 BRCA2 (ENSNLEG00000001048) ENSNLEG00000018658 N4BP2L1 (ENSNLEG00000001095) ENSNLEG00000026904 PDS5B (ENSNLEG00000001108) KL (ENSNLEG00000001146) STARD13 (ENSNLEG00000001147) ENSNLEG00000035439 RFC3 (ENSNLEG00000001169) MAB21L1 (ENSNLEG00000031696) NBEA (ENSNLEG00000001211) DCLK1 (ENSNLEG00000001363) SOHLH2 (ENSNLEG00000030447) Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.t.h.b ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00390000001652.f.b ENSGT00950000183153.c.b.a.a ENSGT00940000159593 ENSGT00950000183179.b.a.e ENSGT00940000155387 ENSGT00730000111162 ENSGT00390000006126 ENSGT01090000260076.a ENSGT00940000153270.b.b ENSGT00390000001750 ENSGT00390000003511 ENSGT00390000011058.b ENSGT00940000161714.a ENSGT00940000155929 ENSGT01050000244976.b.a ENSGT00950000183014.f.b.a.a.t.h.b ##22 ENSGT00940000156634 ENSGT00940000160327 ENSGT00940000159448 ENSGT00550000074851 ENSGT00390000004871.b.n ENSGT00940000159619.a ENSGT00860000135828 ENSGT00940000161771 ENSGT00940000155941.A ENSGT00390000018718 ENSGT00940000156442 ENSGT00940000161593 ENSGT00940000158154 ENSGT00940000156389.a ENSGT00390000004757.`b.b.b Cercopithecinae_d ANCESTRAL SPECIES 16 ENSGT00950000183153.c.b.a.a ENSGT00950000182991.B.xb ENSGT00940000159593 ENSGT00950000183179.b.a.e ENSGT00940000155387 ENSGT00730000111162 ENSGT00390000006126 ENSGT01090000260076.a ENSGT00940000153270.b.b ENSGT00390000001750 ENSGT00390000003511 ENSGT00390000011058.b ENSGT00940000161714.a ENSGT00940000155929 ENSGT01050000244976.b.a ENSGT00950000183014.f.b.a.a.t.h.b ##22 ENSGT00940000156634 ENSGT00940000160327 ENSGT00940000159448 ENSGT00550000074851 ENSGT00390000004871.b.n ENSGT00940000159619.a ENSGT00860000135828 ENSGT00940000161771 ENSGT00940000155941.A ENSGT00390000018718 ENSGT00940000156442 ENSGT00940000161593 ENSGT00940000158154 ENSGT00940000156389.a ENSGT00390000004757.`b.b.b Sooty mangabey MODERN SPECIES 458 ENSCATG00000035983 ENSCATG00000035534 P3H2 (ENSCATG00000004107) ENSCATG00000043737 CLDN1 (ENSCATG00000036292) CLDN16 (ENSCATG00000032777) TMEM207 (ENSCATG00000030596) IL1RAP (ENSCATG00000039782) GMNC (ENSCATG00000036034) OSTN (ENSCATG00000037128) UTS2B (ENSCATG00000039473) CCDC50 (ENSCATG00000045300) PYDC2 (ENSCATG00000009968) FGF12 (ENSCATG00000014779) MB21D2 (ENSCATG00000038408) ENSCATG00000035209 ##22 PLAAT1 (ENSCATG00000042493) ATP13A5 (ENSCATG00000040436) ATP13A4 (ENSCATG00000006996) OPA1 (ENSCATG00000036755) HES1 (ENSCATG00000035003) ENSCATG00000019622 LRRC15 (ENSCATG00000045297) ATP13A3 (ENSCATG00000023296) TMEM44 (ENSCATG00000039641) LSG1 (ENSCATG00000042060) FAM43A (ENSCATG00000021558) XXYLT1 (ENSCATG00000030303) ACAP2 (ENSCATG00000037313) ENSCATG00000010196 ENSCATG00000003993 Olive baboon MODERN SPECIES 11 P3H2 (ENSPANG00000005379) ENSPANG00000051089 CLDN1 (ENSPANG00000012594) CLDN16 (ENSPANG00000013683) TMEM207 (ENSPANG00000005049) IL1RAP (ENSPANG00000002308) GMNC (ENSPANG00000048845) OSTN (ENSPANG00000011077) UTS2B (ENSPANG00000029460) CCDC50 (ENSPANG00000014020) PYDC2 (ENSPANG00000007087) FGF12 (ENSPANG00000004654) ENSPANG00000038631 ENSPANG00000040009 MB21D2 (ENSPANG00000008890) ENSPANG00000049435 ##22 PLAAT1 (ENSPANG00000001991) ATP13A5 (ENSPANG00000007603) ATP13A4 (ENSPANG00000024428) OPA1 (ENSPANG00000016679) HES1 (ENSPANG00000050878) ENSPANG00000045461 ##14 GP5 (ENSPANG00000042651) ATP13A3 (ENSPANG00000000969) ENSPANG00000010652 ENSPANG00000000264 LSG1 (ENSPANG00000018249) FAM43A (ENSPANG00000007602) XXYLT1 (ENSPANG00000024946) ACAP2 (ENSPANG00000017081) ENSPANG00000012757 Platyrrhini ANCESTRAL SPECIES 17 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681.c #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t.h ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354.e #36 ENSGT00730000111801 Mas night monkey MODERN SPECIES 305 ENSANAG00000033452 GRM3 (ENSANAG00000029337) SEMA3D (ENSANAG00000029253) ENSANAG00000034288 ##22 Cebidae ANCESTRAL SPECIES 19 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164666 #18 ENSGT00940000163183 ENSGT00390000004681.c #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t.h ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354.e #36 ENSGT00730000111801 Marmoset MODERN SPECIES 7 SPATC1 (ENSCJAG00000021464) GRINA (ENSCJAG00000021466) PARP10 (ENSCJAG00000034531) PLEC (ENSCJAG00000021472) NRBP2 (ENSCJAG00000021482) PUF60 (ENSCJAG00000021485) SCRIB (ENSCJAG00000021467) FAM83H (ENSCJAG00000021492) #15 MAPK15 (ENSCJAG00000031670) #16 CCDC166 (ENSCJAG00000021422) #17 ZNF707 (ENSCJAG00000044522) #18 ZNF623 (ENSCJAG00000080979) GFUS (ENSCJAG00000021409) #19 PYCR3 (ENSCJAG00000021413) #20 TIGD5 (ENSCJAG00000021417) EEF1D (ENSCJAG00000021419) ##22 NAPRT (ENSCJAG00000047504) #23 MROH6 (ENSCJAG00000021428) #24 GSDMD (ENSCJAG00000021434) #25 ENSCJAG00000070647 ZC3H3 (ENSCJAG00000021439) #26 MAFA (ENSCJAG00000076051) RHPN1 (ENSCJAG00000021444) #27 ZNF696 (ENSCJAG00000035955) #29 ENSCJAG00000047319 #30 ZFP41 (ENSCJAG00000038069) GPIHBP1 (ENSCJAG00000064441) #31 ENSCJAG00000021453 #32 ENSCJAG00000021456 LY6L (ENSCJAG00000035007) #33 ENSCJAG00000021460 ##31 Tarsier MODERN SPECIES 4115 GRINA (ENSTSYG00000031167) PARP10 (ENSTSYG00000005439) PLEC (ENSTSYG00000033419) ENSTSYG00000032979 NRBP2 (ENSTSYG00000011925) PUF60 (ENSTSYG00000011912) SCRIB (ENSTSYG00000031772) IQANK1 (ENSTSYG00000030526) FAM83H (ENSTSYG00000037500) #15 ENSTSYG00000027884 #16 CCDC166 (ENSTSYG00000030807) #17 ZNF707 (ENSTSYG00000008714) #18 ZNF623 (ENSTSYG00000002532) TSTA3 (ENSTSYG00000002457) #19 PYCR3 (ENSTSYG00000025805) #20 EEF1D (ENSTSYG00000037283) #22 NAPRT (ENSTSYG00000012278) #23 MROH6 (ENSTSYG00000025758) #24 GSDMD (ENSTSYG00000004801) #25 ZC3H3 (ENSTSYG00000034906) #26 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00730000111801 Bushbaby MODERN SPECIES 360 ENSOGAG00000034438 SPATC1 (ENSOGAG00000028061) GRINA (ENSOGAG00000011958) PARP10 (ENSOGAG00000033747) PLEC (ENSOGAG00000034616) NRBP2 (ENSOGAG00000006264) PUF60 (ENSOGAG00000006259) SCRIB (ENSOGAG00000033006) FAM83H (ENSOGAG00000025465) #15 MAPK15 (ENSOGAG00000027991) #16 ENSOGAG00000026808 #17 ZNF623 (ENSOGAG00000014953) GFUS (ENSOGAG00000014949) #19 PYCR3 (ENSOGAG00000026290) #20 TIGD5 (ENSOGAG00000024882) EEF1D (ENSOGAG00000014938) #22 NAPRT (ENSOGAG00000014931) #23 MROH6 (ENSOGAG00000031450) #24 GSDMD (ENSOGAG00000014912) #25 ENSOGAG00000028084 ZC3H3 (ENSOGAG00000014907) #26 MAFA (ENSOGAG00000013431) RHPN1 (ENSOGAG00000007174) #27 TOP1MT (ENSOGAG00000007165) #28 ZNF696 (ENSOGAG00000024758) #29 ENSOGAG00000026765 #29 GPIHBP1 (ENSOGAG00000026688) #31 LY6H (ENSOGAG00000015029) #32 LY6E (ENSOGAG00000013341) ##31 ENSOGAG00000030235 #33 ENSOGAG00000024570 Lemuriformes ANCESTRAL SPECIES 36 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Mouse lemur MODERN SPECIES 31 OC90 (ENSMICG00000046279) HHLA1 (ENSMICG00000003609) KCNQ3 (ENSMICG00000003612) DNAAF11 (ENSMICG00000003622) TMEM71 (ENSMICG00000043185) PHF20L1 (ENSMICG00000003634) TG (ENSMICG00000001039) SLA (ENSMICG00000047658) CCN4 (ENSMICG00000001051) NDRG1 (ENSMICG00000001054) ST3GAL1 (ENSMICG00000030976) ZFAT (ENSMICG00000007692) KHDRBS3 (ENSMICG00000027467) GFUS (ENSMICG00000042059) #19 PYCR3 (ENSMICG00000042489) #20 EEF1D (ENSMICG00000028262) #22 NAPRT (ENSMICG00000001115) #23 MROH6 (ENSMICG00000001111) #24 GSDMD (ENSMICG00000001105) #25 ZC3H3 (ENSMICG00000001100) #26 MAFA (ENSMICG00000031627) RHPN1 (ENSMICG00000027040) #27 TOP1MT (ENSMICG00000014807) #28 ZNF696 (ENSMICG00000014798) #29 GLI4 (ENSMICG00000046887) #30 GPIHBP1 (ENSMICG00000014747) #31 LY6H (ENSMICG00000043961) #32 LY6L (ENSMICG00000046185) #33 LY6E (ENSMICG00000043677) ##31 LY6D (ENSMICG00000035118) LYNX1 (ENSMICG00000046110) Lemuriformes_a ANCESTRAL SPECIES 40 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000163354 #36 ENSGT00940000161506 Greater bamboo lemur MODERN SPECIES 868 ZNF707 (ENSPSMG00000023864) #18 ZNF623 (ENSPSMG00000023868) GFUS (ENSPSMG00000023891) #19 PYCR3 (ENSPSMG00000023910) #20 TIGD5 (ENSPSMG00000023915) EEF1D (ENSPSMG00000023968) #22 NAPRT (ENSPSMG00000024008) #23 MROH6 (ENSPSMG00000024021) #24 GSDMD (ENSPSMG00000024026) #25 ZC3H3 (ENSPSMG00000024043) #26 MAFA (ENSPSMG00000024056) RHPN1 (ENSPSMG00000024057) #27 TOP1MT (ENSPSMG00000024067) #28 GLI4 (ENSPSMG00000000038) #30 ZFP41 (ENSPSMG00000000053) GPIHBP1 (ENSPSMG00000000068) #31 LY6H (ENSPSMG00000000110) #32 LY6L (ENSPSMG00000000126) #33 ENSPSMG00000000140 ENSPSMG00000000151 ENSPSMG00000000162 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 398 SPATC1 (ENSPCOG00000026034) GRINA (ENSPCOG00000019260) PARP10 (ENSPCOG00000028616) PLEC (ENSPCOG00000023279) NRBP2 (ENSPCOG00000013703) PUF60 (ENSPCOG00000027981) SCRIB (ENSPCOG00000022509) IQANK1 (ENSPCOG00000026461) FAM83H (ENSPCOG00000025066) #15 ENSPCOG00000023181 #16 CCDC166 (ENSPCOG00000018628) #17 ENSPCOG00000016993 ZNF623 (ENSPCOG00000018658) GFUS (ENSPCOG00000027172) #19 PYCR3 (ENSPCOG00000017283) #20 EEF1D (ENSPCOG00000025419) #22 NAPRT (ENSPCOG00000025297) #23 MROH6 (ENSPCOG00000019811) #24 GSDMD (ENSPCOG00000028039) #25 ZC3H3 (ENSPCOG00000028174) #26 MAFA (ENSPCOG00000012800) RHPN1 (ENSPCOG00000028884) #27 TOP1MT (ENSPCOG00000026137) #28 ZNF696 (ENSPCOG00000022813) #29 GLI4 (ENSPCOG00000020486) #30 GPIHBP1 (ENSPCOG00000027994) #31 LY6H (ENSPCOG00000000603) #32 LY6L (ENSPCOG00000024536) #33 ENSPCOG00000017807 ENSPCOG00000016523 #36 CYP11B1 (ENSPCOG00000015614) Coquerels sifaka MODERN SPECIES 237 ENSPCOG00000023420 ENSPCOG00000024227 ENSPCOG00000017327 FOLH1 (ENSPCOG00000018014) NOX4 (ENSPCOG00000017092) TYR (ENSPCOG00000016235) GRM5 (ENSPCOG00000028721) ENSPCOG00000024115 #22 CTSC (ENSPCOG00000001859) RAB38 (ENSPCOG00000020800) TMEM135 (ENSPCOG00000015029) FZD4 (ENSPCOG00000018933) ME3 (ENSPCOG00000027098) CCDC81 (ENSPCOG00000024443) HIKESHI (ENSPCOG00000028239) EED (ENSPCOG00000022510) ENSPCOG00000024002 PICALM (ENSPCOG00000026679) CCDC83 (ENSPCOG00000008593) SYTL2 (ENSPCOG00000009450) ENSPCOG00000015922 TMEM126A (ENSPCOG00000020359) TMEM126B (ENSPCOG00000020968) Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Glires ANCESTRAL SPECIES 20 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000012457 PLEC (ENSHGLG00000012646) ENSHGLG00000014585 NRBP2 (ENSHGLG00000014621) PUF60 (ENSHGLG00000006111) FAM83H (ENSHGLG00000016899) #15 MAPK15 (ENSHGLG00000044970) #16 ENSHGLG00000015050 #17 ENSHGLG00000039178 #17 ENSHGLG00000039255 ZNF623 (ENSHGLG00000044862) GFUS (ENSHGLG00000009464) #19 ENSHGLG00000006778 #20 TIGD5 (ENSHGLG00000007775) ENSHGLG00000038349 ENSHGLG00000043389 #22 NAPRT (ENSHGLG00000013733) #23 MROH6 (ENSHGLG00000018619) #24 GSDMD (ENSHGLG00000008317) #25 ZC3H3 (ENSHGLG00000011234) #26 MAFA (ENSHGLG00000020639) RHPN1 (ENSHGLG00000007767) #27 GLI4 (ENSHGLG00000036792) #30 ZFP41 (ENSHGLG00000005516) GPIHBP1 (ENSHGLG00000043232) #31 ENSHGLG00000032185 #32 ENSHGLG00000045037 #33 ENSHGLG00000004712 ENSHGLG00000006100 ENSHGLG00000042259 ##31 ENSHGLG00000036086 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b.q.b ##31 ENSGT00940000159966.A Guinea pig MODERN SPECIES 95 GRINA (ENSCPOG00000009878) PARP10 (ENSCPOG00000014235) PLEC (ENSCPOG00000007957) ENSCPOG00000012436 PUF60 (ENSCPOG00000014613) SCRIB (ENSCPOG00000014605) IQANK1 (ENSCPOG00000020895) FAM83H (ENSCPOG00000013323) #15 MAPK15 (ENSCPOG00000013318) #16 CCDC166 (ENSCPOG00000024168) #17 ENSCPOG00000032341 ZNF623 (ENSCPOG00000009794) GFUS (ENSCPOG00000000051) #19 PYCR3 (ENSCPOG00000039640) #20 TIGD5 (ENSCPOG00000039267) EEF1D (ENSCPOG00000000048) #22 NAPRT (ENSCPOG00000000047) #23 MROH6 (ENSCPOG00000000046) #24 GSDMD (ENSCPOG00000000044) #25 ZC3H3 (ENSCPOG00000006248) #26 MAFA (ENSCPOG00000021977) RHPN1 (ENSCPOG00000006972) #27 TOP1MT (ENSCPOG00000022690) #28 GLI4 (ENSCPOG00000040511) #30 ZFP41 (ENSCPOG00000040680) GPIHBP1 (ENSCPOG00000040336) #31 LY6H (ENSCPOG00000037598) #32 ENSCPOG00000033154 ENSCPOG00000013558 ENSCPOG00000024809 LY6E (ENSCPOG00000034097) ##31 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b.q.b ##31 ENSGT00940000159966.A Long-tailed chinchilla MODERN SPECIES 161 PLEC (ENSCLAG00000012830) ENSCLAG00000017854 ENSCLAG00000015256 ENSCLAG00000017347 PUF60 (ENSCLAG00000009154) SCRIB (ENSCLAG00000010805) IQANK1 (ENSCLAG00000013041) FAM83H (ENSCLAG00000013519) #15 MAPK15 (ENSCLAG00000011011) #16 CCDC166 (ENSCLAG00000008849) #17 ENSCLAG00000011044 ZNF623 (ENSCLAG00000014678) GFUS (ENSCLAG00000008907) #19 PYCR3 (ENSCLAG00000010276) #20 TIGD5 (ENSCLAG00000018021) ENSCLAG00000008571 #22 NAPRT (ENSCLAG00000014862) #23 MROH6 (ENSCLAG00000014422) #24 GSDMD (ENSCLAG00000009094) #25 ZC3H3 (ENSCLAG00000009999) #26 MAFA (ENSCLAG00000018099) RHPN1 (ENSCLAG00000012218) #27 TOP1MT (ENSCLAG00000013877) #28 ZNF696 (ENSCLAG00000012633) #29 GLI4 (ENSCLAG00000012388) #30 ZFP41 (ENSCLAG00000009799) GPIHBP1 (ENSCLAG00000008784) #31 LY6H (ENSCLAG00000008479) #32 LY6L (ENSCLAG00000010712) #33 ENSCLAG00000013664 ##31 GML (ENSCLAG00000010524) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 145 GRINA (ENSODEG00000012971) PARP10 (ENSODEG00000014276) PLEC (ENSODEG00000014671) NRBP2 (ENSODEG00000013124) ENSODEG00000014024 SCRIB (ENSODEG00000013795) IQANK1 (ENSODEG00000013696) FAM83H (ENSODEG00000014158) #15 MAPK15 (ENSODEG00000014999) #16 CCDC166 (ENSODEG00000014189) #17 ENSODEG00000014226 ENSODEG00000013485 GFUS (ENSODEG00000014465) #19 PYCR3 (ENSODEG00000015350) #20 TIGD5 (ENSODEG00000013505) ENSODEG00000013624 #22 NAPRT (ENSODEG00000014091) #23 MROH6 (ENSODEG00000013415) #24 GSDMD (ENSODEG00000014859) #25 ZC3H3 (ENSODEG00000014239) #26 MAFA (ENSODEG00000020376) RHPN1 (ENSODEG00000013521) #27 TOP1MT (ENSODEG00000013839) #28 ENSODEG00000014235 ZFP41 (ENSODEG00000020283) GPIHBP1 (ENSODEG00000014571) #31 LY6H (ENSODEG00000013867) #32 ENSODEG00000020306 LY6E (ENSODEG00000014194) ##31 ENSODEG00000014405 ENSODEG00000013937 Degu MODERN SPECIES 51 ENSODEG00000017538 ENSODEG00000017508 ENSODEG00000017380 CUZD1 (ENSODEG00000017550) C10orf88 (ENSODEG00000017572) PSTK (ENSODEG00000017417) ENSODEG00000017599 ACADSB (ENSODEG00000017347) HMX3 (ENSODEG00000017303) HMX2 (ENSODEG00000017125) ENSODEG00000017376 ENSODEG00000020472 GPR26 (ENSODEG00000017488) CPXM2 (ENSODEG00000017290) CHST15 (ENSODEG00000017382) ENSODEG00000017605 #22 ENSODEG00000017421 ENSODEG00000017371 NKX1-2 (ENSODEG00000017123) LHPP (ENSODEG00000017592) FAM53B (ENSODEG00000017219) EEF1AKMT2 (ENSODEG00000017201) ENSODEG00000020434 ENSODEG00000017504 ZRANB1 (ENSODEG00000017463) ENSODEG00000017299 ENSODEG00000020429 EDRF1 (ENSODEG00000017549) ENSODEG00000017340 ENSODEG00000017669 BCCIP (ENSODEG00000017275) Degu MODERN SPECIES 57 ENSODEG00000007722 FN1 (ENSODEG00000008281) ENSODEG00000008301 ABCA12 (ENSODEG00000012235) ENSODEG00000008221 ENSODEG00000009279 VWC2L (ENSODEG00000008549) ENSODEG00000007901 ENSODEG00000008353 ENSODEG00000008509 IKZF2 (ENSODEG00000008010) ERBB4 (ENSODEG00000009033) ENSODEG00000013776 ENSODEG00000008980 CPS1 (ENSODEG00000007917) ENSODEG00000008576 #22 LANCL1 (ENSODEG00000013138) MYL1 (ENSODEG00000007814) ACADL (ENSODEG00000008088) KANSL1L (ENSODEG00000008832) ENSODEG00000008423 UNC80 (ENSODEG00000009853) MAP2 (ENSODEG00000009342) ENSODEG00000019840 ENSODEG00000019756 PTH2R (ENSODEG00000010800) PIKFYVE (ENSODEG00000008877) ENSODEG00000009512 C2orf80 (ENSODEG00000009684) CRYGA (ENSODEG00000009878) ENSODEG00000009966 Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000159966.A ENSGT00940000161506 Eurasian red squirrel MODERN SPECIES GRINA (ENSSVLG00005000885) PARP10 (ENSSVLG00005000874) PLEC (ENSSVLG00005000647) ENSSVLG00005000271 ENSSVLG00005000218 NRBP2 (ENSSVLG00005000166) PUF60 (ENSSVLG00005024610) ENSSVLG00005024516 FAM83H (ENSSVLG00005024372) #15 MAPK15 (ENSSVLG00005024296) #16 ENSSVLG00005024256 #17 ENSSVLG00005024227 ZNF623 (ENSSVLG00005024218) PYCR3 (ENSSVLG00005024114) #20 TIGD5 (ENSSVLG00005024082) EEF1D (ENSSVLG00005023988) #22 NAPRT (ENSSVLG00005023946) #23 MROH6 (ENSSVLG00005023860) #24 GSDMD (ENSSVLG00005023840) #25 ZC3H3 (ENSSVLG00005023813) #26 MAFA (ENSSVLG00005023798) GLI4 (ENSSVLG00005023630) #30 ENSSVLG00005023618 LY6H (ENSSVLG00005023525) #32 LY6E (ENSSVLG00005023441) ##31 ENSSVLG00005023389 ENSSVLG00005023320 #36 ENSSVLG00005023219 #36 LY6D (ENSSVLG00005023172) LYNX1 (ENSSVLG00005023135) LYPD2 (ENSSVLG00005023079) Marmotini ANCESTRAL SPECIES 10 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000159966.A ENSGT00940000161506 Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000159966.A ENSGT00940000161506 ENSGT00520000061332 Squirrel MODERN SPECIES 70 CYC1 (ENSSTOG00000002670) GPAA1 (ENSSTOG00000026163) EXOSC4 (ENSSTOG00000002632) ENSSTOG00000031359 OPLAH (ENSSTOG00000002587) ENSSTOG00000026841 ENSSTOG00000025838 PLEC (ENSSTOG00000023061) NRBP2 (ENSSTOG00000023485) PUF60 (ENSSTOG00000025037) SCRIB (ENSSTOG00000003571) FAM83H (ENSSTOG00000020789) #15 MAPK15 (ENSSTOG00000024211) #16 GFUS (ENSSTOG00000003700) #19 PYCR3 (ENSSTOG00000003681) #20 EEF1D (ENSSTOG00000000025) #22 NAPRT (ENSSTOG00000000024) #23 GSDMD (ENSSTOG00000025332) #25 ZC3H3 (ENSSTOG00000004358) #26 MAFA (ENSSTOG00000026889) RHPN1 (ENSSTOG00000020790) #27 ZNF696 (ENSSTOG00000033270) #29 GLI4 (ENSSTOG00000023930) #30 ZFP41 (ENSSTOG00000022550) LY6H (ENSSTOG00000001914) #32 ENSSTOG00000001472 LY6D (ENSSTOG00000016531) ENSSTOG00000022520 THEM6 (ENSSTOG00000022145) PSCA (ENSSTOG00000008313) ##31 JRK (ENSSTOG00000021183) Arctic ground squirrel MODERN SPECIES 436 GRINA (ENSUPAG00010023526) PARP10 (ENSUPAG00010023525) PLEC (ENSUPAG00010023496) ENSUPAG00010023492 NRBP2 (ENSUPAG00010023491) PUF60 (ENSUPAG00010023489) IQANK1 (ENSUPAG00010023470) FAM83H (ENSUPAG00010023469) #15 MAPK15 (ENSUPAG00010023467) #16 ENSUPAG00010023466 #17 ENSUPAG00010023465 ZNF623 (ENSUPAG00010023464) GFUS (ENSUPAG00010023461) #19 PYCR3 (ENSUPAG00010023460) #20 TIGD5 (ENSUPAG00010023459) EEF1D (ENSUPAG00010023458) #22 NAPRT (ENSUPAG00010023457) #23 MROH6 (ENSUPAG00010023456) #24 GSDMD (ENSUPAG00010023455) #25 ZC3H3 (ENSUPAG00010023454) #26 MAFA (ENSUPAG00010023453) RHPN1 (ENSUPAG00010023452) #27 ZNF696 (ENSUPAG00010023451) #29 GLI4 (ENSUPAG00010023449) #30 ZFP41 (ENSUPAG00010023448) ENSUPAG00010023446 #31 LY6H (ENSUPAG00010023445) #32 LY6E (ENSUPAG00010023443) ##31 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 18 OPLAH (ENSMMMG00000007170) ENSMMMG00000007164 SPATC1 (ENSMMMG00000007143) GRINA (ENSMMMG00000007125) PARP10 (ENSMMMG00000007089) PLEC (ENSMMMG00000006621) ENSMMMG00000006594 NRBP2 (ENSMMMG00000006581) PUF60 (ENSMMMG00000006516) ENSMMMG00000006425 ENSMMMG00000006411 #17 ENSMMMG00000006401 ZNF623 (ENSMMMG00000006391) GFUS (ENSMMMG00000006361) #19 PYCR3 (ENSMMMG00000006350) #20 EEF1D (ENSMMMG00000006276) #22 NAPRT (ENSMMMG00000006266) #23 MROH6 (ENSMMMG00000006251) #24 GSDMD (ENSMMMG00000006237) #25 ZC3H3 (ENSMMMG00000006034) #26 RHPN1 (ENSMMMG00000006003) #27 ZNF696 (ENSMMMG00000005990) #29 GLI4 (ENSMMMG00000006001) #30 ZFP41 (ENSMMMG00000005975) ENSMMMG00000005968 #31 LY6H (ENSMMMG00000005953) #32 LY6L (ENSMMMG00000005942) #33 ENSMMMG00000005911 LY6E (ENSMMMG00000005897) ##31 ENSMMMG00000005886 ENSMMMG00000005875 Alpin marmot MODERN SPECIES 60 ATP12A (ENSMMMG00000012157) ENSMMMG00000012149 RNF17 (ENSMMMG00000012085) CENPJ (ENSMMMG00000012056) ENSMMMG00000012048 #22 PARP4 (ENSMMMG00000008914) ENSMMMG00000008887 MPHOSPH8 (ENSMMMG00000008877) PSPC1 (ENSMMMG00000008864) ZMYM2 (ENSMMMG00000008821) ENSMMMG00000008819 GJB2 (ENSMMMG00000008811) GJB6 (ENSMMMG00000008806) ENSMMMG00000008803 ENSMMMG00000008789 CRYL1 (ENSMMMG00000008777) IFT88 (ENSMMMG00000008732) EEF1AKMT1 (ENSMMMG00000008721) ENSMMMG00000008684 LATS2 (ENSMMMG00000008675) Rodentia_B ANCESTRAL SPECIES 17 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506 Muroidea ANCESTRAL SPECIES 14 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506.g Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000162035 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000162035 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506.g ENSGT00940000159966.B Chinese hamster chok1gshd MODERN SPECIES 1 Parp10 (ENSCGRG00001012953) Plec (ENSCGRG00001019864) BC024139 (ENSCGRG00001014083) Nrbp2 (ENSCGRG00001018015) Puf60 (ENSCGRG00001017442) Scrib (ENSCGRG00001018290) Iqank1 (ENSCGRG00001015411) Fam83h (ENSCGRG00001013512) #15 Mapk15 (ENSCGRG00001013199) #16 ENSCGRG00001017466 #17 Zfp707 (ENSCGRG00001017122) Zfp623 (ENSCGRG00001009589) Gfus (ENSCGRG00001015305) #19 Pycrl (ENSCGRG00001022822) #20 Tigd5 (ENSCGRG00001010766) Eef1d (ENSCGRG00001014276) #22 Naprt (ENSCGRG00001013665) #23 Mroh6 (ENSCGRG00001013151) #24 Gsdmd (ENSCGRG00001012963) #25 Zc3h3 (ENSCGRG00001016268) #26 Rhpn1 (ENSCGRG00001008904) #27 Top1mt (ENSCGRG00001013641) #28 ENSCGRG00001013239 #30 Zfp41 (ENSCGRG00001009367) Gpihbp1 (ENSCGRG00001020841) #31 Ly6h (ENSCGRG00001020640) #32 Ly6l (ENSCGRG00001013702) #33 ENSCGRG00001012836 #33 Ly6e (ENSCGRG00001013220) ##31 Ly6m (ENSCGRG00001013038) Cyp11b2 (ENSCGRG00001013624) Golden Hamster MODERN SPECIES 828 Grina (ENSMAUG00000014519) Parp10 (ENSMAUG00000001839) Plec (ENSMAUG00000001116) BC024139 (ENSMAUG00000020348) Nrbp2 (ENSMAUG00000003416) ENSMAUG00000014267 ENSMAUG00000012655 Iqank1 (ENSMAUG00000020827) Fam83h (ENSMAUG00000018667) #15 Mapk15 (ENSMAUG00000015444) #16 ENSMAUG00000017254 #17 Zfp707 (ENSMAUG00000019306) Gfus (ENSMAUG00000011454) #19 Pycrl (ENSMAUG00000018085) #20 Tigd5 (ENSMAUG00000005967) ENSMAUG00000000730 #22 Mroh6 (ENSMAUG00000017993) #24 Gsdmd (ENSMAUG00000010559) #25 Zc3h3 (ENSMAUG00000011009) #26 Rhpn1 (ENSMAUG00000012757) #27 Top1mt (ENSMAUG00000021425) #28 Gpihbp1 (ENSMAUG00000020734) #31 Ly6h (ENSMAUG00000017401) #32 Ly6l (ENSMAUG00000008061) #33 ENSMAUG00000014385 ##31 Ly6m (ENSMAUG00000003450) ENSMAUG00000012477 Murinae ANCESTRAL SPECIES 10 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a.b #33 ENSGT00940000154560.a.a.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 Mus ANCESTRAL SPECIES 11 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a.a.a.a.b #33 ENSGT00940000154560.a.a.a.a.a.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506.g Mus_A ANCESTRAL SPECIES 13 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a.b #33 ENSGT00940000154560.a.a.a.a.a.a.a.a #33 ENSGT00940000154560.a.a.a.a.a.b #33 ENSGT00940000154560.a.a.a.b #33 ENSGT00940000153378.b.b ##31 Mus_B ANCESTRAL SPECIES 12 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a.b #33 ENSGT00940000154560.a.a.a.a.a.a.a.a #33 ENSGT00940000154560.a.a.a.a.a.b #33 ENSGT00940000154560.a.a.a.b.a #33 ENSGT00940000154560.a.a.a.a.a.a.a.b #33 Mus_C ANCESTRAL SPECIES 17 ENSGT00940000162035 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a.b #33 ENSGT00940000154560.a.a.a.a.a.a.a.a #33 ENSGT00940000154560.a.a.a.a.a.b #33 ENSGT00940000154560.a.a.a.b.a #33 ENSGT00940000154560.a.a.a.a.a.a.a.b #33 spretus MODERN SPECIES 6 Plec (MGP_SPRETEiJ_G0020816) BC024139 (MGP_SPRETEiJ_G0020815) MGP_SPRETEiJ_G0020814 MGP_SPRETEiJ_G0020813 Puf60 (MGP_SPRETEiJ_G0020812) Scrib (MGP_SPRETEiJ_G0020811) MGP_SPRETEiJ_G0020810 Fam83h (MGP_SPRETEiJ_G0020809) #15 Mapk15 (MGP_SPRETEiJ_G0020808) #16 Ccdc166 (MGP_SPRETEiJ_G0020807) Zfp707 (MGP_SPRETEiJ_G0020806) Zfp623 (MGP_SPRETEiJ_G0020805) MGP_SPRETEiJ_G0020804 #19 Pycrl (MGP_SPRETEiJ_G0020803) #20 Tigd5 (MGP_SPRETEiJ_G0020802) Eef1d (MGP_SPRETEiJ_G0020801) #22 Naprt (MGP_SPRETEiJ_G0020800) #23 Mroh6 (MGP_SPRETEiJ_G0020799) #24 Gsdmd (MGP_SPRETEiJ_G0020798) #25 Zc3h3 (MGP_SPRETEiJ_G0020797) #26 Mafa (MGP_SPRETEiJ_G0020796) Rhpn1 (MGP_SPRETEiJ_G0020795) #27 Top1mt (MGP_SPRETEiJ_G0020794) #28 Zfp41 (MGP_SPRETEiJ_G0020793) Gpihbp1 (MGP_SPRETEiJ_G0020792) #31 Ly6h (MGP_SPRETEiJ_G0020791) #32 Ly6l (MGP_SPRETEiJ_G0020790) #33 MGP_SPRETEiJ_G0020789 Ly6g2 (MGP_SPRETEiJ_G0020788) #33 MGP_SPRETEiJ_G0020787 #33 MGP_SPRETEiJ_G0020785 #33 Steppe mouse MODERN SPECIES 2988 Parp10 (ENSMSIG00000023344) Plec (ENSMSIG00000022620) ENSMSIG00000022591 BC024139 (ENSMSIG00000022558) Nrbp2 (ENSMSIG00000022514) Puf60 (ENSMSIG00000022454) ENSMSIG00000021768 Fam83h (ENSMSIG00000021720) #15 Mapk15 (ENSMSIG00000021708) #16 ENSMSIG00000021702 #17 Zfp707 (ENSMSIG00000021670) Zfp623 (ENSMSIG00000021664) ENSMSIG00000021506 #19 Pycrl (ENSMSIG00000021499) #20 Tigd5 (ENSMSIG00000021495) Eef1d (ENSMSIG00000021333) #22 Naprt (ENSMSIG00000021307) #23 Mroh6 (ENSMSIG00000021287) #24 Gsdmd (ENSMSIG00000021268) #25 Zc3h3 (ENSMSIG00000021237) #26 Mafa (ENSMSIG00000021226) Rhpn1 (ENSMSIG00000021180) #27 Top1mt (ENSMSIG00000021154) #28 ENSMSIG00000021147 Zfp41 (ENSMSIG00000021141) Gpihbp1 (ENSMSIG00000021118) #31 Ly6h (ENSMSIG00000021100) #32 Ly6l (ENSMSIG00000021075) #33 Mouse MODERN SPECIES 6 Plec (ENSMUSG00000022565) BC024139 (ENSMUSG00000044361) Eppk1 (ENSMUSG00000118671) Nrbp2 (ENSMUSG00000075590) Puf60 (ENSMUSG00000002524) Scrib (ENSMUSG00000022568) Iqank1 (ENSMUSG00000102018) Fam83h (ENSMUSG00000046761) #15 Mapk15 (ENSMUSG00000063704) #16 Ccdc166 (ENSMUSG00000098176) Zfp707 (ENSMUSG00000034429) Zfp623 (ENSMUSG00000050846) Gfus (ENSMUSG00000022570) #19 Pycrl (ENSMUSG00000022571) #20 Tigd5 (ENSMUSG00000103906) Eef1d (ENSMUSG00000055762) #22 Naprt (ENSMUSG00000022574) #23 Mroh6 (ENSMUSG00000098678) #24 Gsdmd (ENSMUSG00000022575) #25 Zc3h3 (ENSMUSG00000075600) #26 Mafa (ENSMUSG00000047591) Rhpn1 (ENSMUSG00000022580) #27 Top1mt (ENSMUSG00000000934) #28 Zfp41 (ENSMUSG00000047003) Gpihbp1 (ENSMUSG00000022579) #31 Ly6h (ENSMUSG00000022577) #32 Ly6l (ENSMUSG00000093626) #33 Ly6f (ENSMUSG00000022583) #33 Ly6g2 (ENSMUSG00000047728) #33 Ly6g (ENSMUSG00000022582) #33 Ly6c2 (ENSMUSG00000022584) #33 Ryukyu mouse MODERN SPECIES 6 Spatc1 (MGP_CAROLIEiJ_G0019916) Grina (MGP_CAROLIEiJ_G0019915) Parp10 (MGP_CAROLIEiJ_G0019914) Plec (MGP_CAROLIEiJ_G0019913) BC024139 (MGP_CAROLIEiJ_G0019912) Nrbp2 (MGP_CAROLIEiJ_G0019911) Puf60 (MGP_CAROLIEiJ_G0019910) Scrib (MGP_CAROLIEiJ_G0019909) MGP_CAROLIEiJ_G0019908 Fam83h (MGP_CAROLIEiJ_G0019907) #15 Mapk15 (MGP_CAROLIEiJ_G0019906) #16 Zfp623 (MGP_CAROLIEiJ_G0019905) MGP_CAROLIEiJ_G0019904 #19 Pycrl (MGP_CAROLIEiJ_G0019903) #20 Tigd5 (MGP_CAROLIEiJ_G0019902) Eef1d (MGP_CAROLIEiJ_G0019901) #22 Naprt (MGP_CAROLIEiJ_G0019900) #23 Mroh6 (MGP_CAROLIEiJ_G0019899) #24 Gsdmd (MGP_CAROLIEiJ_G0019898) #25 Zc3h3 (MGP_CAROLIEiJ_G0019897) #26 Mafa (MGP_CAROLIEiJ_G0019896) Rhpn1 (MGP_CAROLIEiJ_G0019895) #27 Top1mt (MGP_CAROLIEiJ_G0019894) #28 Zfp41 (MGP_CAROLIEiJ_G0019893) Gpihbp1 (MGP_CAROLIEiJ_G0019892) #31 Ly6h (MGP_CAROLIEiJ_G0019891) #32 Ly6g2 (MGP_CAROLIEiJ_G0019890) #33 MGP_CAROLIEiJ_G0019888 #33 MGP_CAROLIEiJ_G0019887 #33 Ly6e (MGP_CAROLIEiJ_G0019886) ##31 Ly6m (MGP_CAROLIEiJ_G0019885) Shrew mouse MODERN SPECIES 8 Parp10 (MGP_PahariEiJ_G0019924) Plec (MGP_PahariEiJ_G0019923) BC024139 (MGP_PahariEiJ_G0019922) Nrbp2 (MGP_PahariEiJ_G0019921) Puf60 (MGP_PahariEiJ_G0019920) Scrib (MGP_PahariEiJ_G0019919) MGP_PahariEiJ_G0019918 Fam83h (MGP_PahariEiJ_G0019917) #15 Mapk15 (MGP_PahariEiJ_G0019916) #16 Ccdc166 (MGP_PahariEiJ_G0019915) Zfp707 (MGP_PahariEiJ_G0019914) Zfp623 (MGP_PahariEiJ_G0019913) MGP_PahariEiJ_G0019912 #19 Pycrl (MGP_PahariEiJ_G0019911) #20 Tigd5 (MGP_PahariEiJ_G0019910) Eef1d (MGP_PahariEiJ_G0019909) #22 Naprt (MGP_PahariEiJ_G0019908) #23 Mroh6 (MGP_PahariEiJ_G0019907) #24 Gsdmd (MGP_PahariEiJ_G0019906) #25 Zc3h3 (MGP_PahariEiJ_G0019905) #26 Mafa (MGP_PahariEiJ_G0019904) Rhpn1 (MGP_PahariEiJ_G0019903) #27 Top1mt (MGP_PahariEiJ_G0019902) #28 Zfp41 (MGP_PahariEiJ_G0019901) Gpihbp1 (MGP_PahariEiJ_G0019900) #31 Ly6h (MGP_PahariEiJ_G0019899) #32 MGP_PahariEiJ_G0019898 #33 Ly6g (MGP_PahariEiJ_G0019897) #33 MGP_PahariEiJ_G0019896 #33 Ly6e (MGP_PahariEiJ_G0019893) ##31 Ly6m (MGP_PahariEiJ_G0019892) Rat MODERN SPECIES 17 Parp10 (ENSRNOG00000004361) Plec (ENSRNOG00000023781) LOC680875 (ENSRNOG00000023828) Eppk1 (ENSRNOG00000068431) Nrbp2 (ENSRNOG00000029535) Puf60 (ENSRNOG00000009960) Scrib (ENSRNOG00000032574) Iqank1 (ENSRNOG00000063360) Fam83h (ENSRNOG00000030264) #15 Mapk15 (ENSRNOG00000009336) #16 Ccdc166 (ENSRNOG00000047521) #17 Zfp707l1 (ENSRNOG00000057901) Zfp623 (ENSRNOG00000009302) Gfus (ENSRNOG00000009020) #19 Tigd5 (ENSRNOG00000008686) Pycr3 (ENSRNOG00000021638) #22 Naprt (ENSRNOG00000007939) #23 Mroh6 (ENSRNOG00000032231) #24 Gsdmd (ENSRNOG00000007728) #25 Zc3h3 (ENSRNOG00000007684) #26 Mafa (ENSRNOG00000007668) Rhpn1 (ENSRNOG00000007597) #27 Top1mt (ENSRNOG00000007500) #28 Gli4 (ENSRNOG00000021765) #30 Zfp41 (ENSRNOG00000007489) Gpihbp1 (ENSRNOG00000064680) #31 Ly6h (ENSRNOG00000007334) #32 Ly6al (ENSRNOG00000037374) #33 Ly6l (ENSRNOG00000048148) #33 Ly6i (ENSRNOG00000007137) #33 LOC300024 (ENSRNOG00000048850) #33 Upper Galilee mountains blind mole rat MODERN SPECIES 887 Spatc1 (ENSNGAG00000024326) Grina (ENSNGAG00000023778) Parp10 (ENSNGAG00000023968) Plec (ENSNGAG00000008931) BC024139 (ENSNGAG00000018326) Nrbp2 (ENSNGAG00000017478) Puf60 (ENSNGAG00000000712) Scrib (ENSNGAG00000020420) Fam83h (ENSNGAG00000020634) #15 Mapk15 (ENSNGAG00000013212) #16 ENSNGAG00000022071 #17 Zfp707 (ENSNGAG00000008924) Gfus (ENSNGAG00000016673) #19 Pycrl (ENSNGAG00000020709) #20 Tigd5 (ENSNGAG00000016409) Eef1d (ENSNGAG00000020992) #22 Naprt (ENSNGAG00000024126) #23 Gsdmd (ENSNGAG00000010971) #25 Zc3h3 (ENSNGAG00000008574) #26 Mafa (ENSNGAG00000000584) Rhpn1 (ENSNGAG00000022376) #27 Top1mt (ENSNGAG00000000704) #28 Lesser Egyptian jerboa MODERN SPECIES 59 ENSJJAG00000015533 Parp10 (ENSJJAG00000017801) Plec (ENSJJAG00000012390) BC024139 (ENSJJAG00000016163) Nrbp2 (ENSJJAG00000015418) Puf60 (ENSJJAG00000001076) Scrib (ENSJJAG00000016202) Iqank1 (ENSJJAG00000022777) Fam83h (ENSJJAG00000021217) #15 Mapk15 (ENSJJAG00000001348) #16 ENSJJAG00000024374 #17 Zfp707 (ENSJJAG00000015665) Gfus (ENSJJAG00000015612) #19 Pycrl (ENSJJAG00000006190) #20 Tigd5 (ENSJJAG00000018444) Eef1d (ENSJJAG00000012433) #22 Naprt (ENSJJAG00000023431) #23 Mroh6 (ENSJJAG00000021126) #24 Gsdmd (ENSJJAG00000014659) #25 Zc3h3 (ENSJJAG00000023757) #26 Mafa (ENSJJAG00000009961) Rhpn1 (ENSJJAG00000019332) #27 Zfp41 (ENSJJAG00000021551) Gpihbp1 (ENSJJAG00000014382) #31 Ly6h (ENSJJAG00000003342) #32 Ly6l (ENSJJAG00000024262) #33 Ly6e (ENSJJAG00000015921) ##31 Ly6m (ENSJJAG00000017358) Kangaroo rat MODERN SPECIES 497 Maf1 (ENSDORG00000008473) Gpaa1 (ENSDORG00000008463) Exosc4 (ENSDORG00000008461) Oplah (ENSDORG00000010841) ENSDORG00000010839 ENSDORG00000029086 ENSDORG00000029564 Nrbp2 (ENSDORG00000004589) Puf60 (ENSDORG00000004585) Scrib (ENSDORG00000004583) Iqank1 (ENSDORG00000027220) ENSDORG00000025620 #15 Zfp623 (ENSDORG00000026298) Gfus (ENSDORG00000000596) #19 Pycrl (ENSDORG00000000595) #20 Eef1d (ENSDORG00000000593) #22 Naprt (ENSDORG00000000591) #23 Gsdmd (ENSDORG00000000580) #25 Tigd5 (ENSDORG00000025658) Zc3h3 (ENSDORG00000023832) #26 Rhpn1 (ENSDORG00000000889) #27 Top1mt (ENSDORG00000012850) #28 Zfp41 (ENSDORG00000026127) ENSDORG00000011422 #31 Ly6h (ENSDORG00000023303) #32 Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 Glires ANCESTRAL SPECIES 20 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT01100000266998 ENSGT00950000183014.f.b.a.a.t #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.a ##22 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.t #22 ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506.g Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00940000162035 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.s.a ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00730000111801 ENSGT00940000161506.g Prairie vole MODERN SPECIES 2 Parp10 (ENSMOCG00000000179) Plec (ENSMOCG00000000674) BC024139 (ENSMOCG00000019744) Nrbp2 (ENSMOCG00000002147) Puf60 (ENSMOCG00000018780) Scrib (ENSMOCG00000011374) Iqank1 (ENSMOCG00000004464) Fam83h (ENSMOCG00000007730) #15 Mapk15 (ENSMOCG00000011658) #16 ENSMOCG00000019019 #17 Zfp707 (ENSMOCG00000017775) Zfp623 (ENSMOCG00000014910) Gfus (ENSMOCG00000008645) #19 Pycrl (ENSMOCG00000006633) #20 Tigd5 (ENSMOCG00000004161) ENSMOCG00000010950 ##22 Naprt (ENSMOCG00000017024) #23 Mroh6 (ENSMOCG00000011231) #24 Zc3h3 (ENSMOCG00000000733) #26 Mafa (ENSMOCG00000021750) Rhpn1 (ENSMOCG00000001034) #27 Top1mt (ENSMOCG00000014699) #28 ENSMOCG00000004387 #30 Zfp41 (ENSMOCG00000008888) Gpihbp1 (ENSMOCG00000004404) #31 Ly6h (ENSMOCG00000006704) #32 Ly6l (ENSMOCG00000001807) #33 ENSMOCG00000018112 Ly6e (ENSMOCG00000021450) ##31 Ly6m (ENSMOCG00000018758) Cyp11b2 (ENSMOCG00000001733) Northern American deer mouse MODERN SPECIES 12 Plec (ENSPEMG00000011922) BC024139 (ENSPEMG00000014082) ENSPEMG00000025582 ENSPEMG00000026342 Puf60 (ENSPEMG00000008820) Scrib (ENSPEMG00000011210) Iqank1 (ENSPEMG00000016003) Fam83h (ENSPEMG00000025375) #15 Mapk15 (ENSPEMG00000002190) #16 ENSPEMG00000031059 #17 Zfp707 (ENSPEMG00000010804) Zfp623 (ENSPEMG00000011533) Gfus (ENSPEMG00000018796) #19 Pycrl (ENSPEMG00000008129) #20 Tigd5 (ENSPEMG00000006475) Eef1d (ENSPEMG00000012989) ##22 Naprt (ENSPEMG00000001062) #23 Mroh6 (ENSPEMG00000009446) #24 ENSPEMG00000015784 #25 Zc3h3 (ENSPEMG00000013893) #26 Rhpn1 (ENSPEMG00000014071) #27 Top1mt (ENSPEMG00000012997) #28 ENSPEMG00000025643 #30 Zfp41 (ENSPEMG00000030065) Gpihbp1 (ENSPEMG00000014054) #31 Ly6h (ENSPEMG00000029128) #32 ENSPEMG00000025986 Ly6l (ENSPEMG00000019007) #33 ENSPEMG00000028943 #33 Ly6e (ENSPEMG00000030435) ##31 Ly6m (ENSPEMG00000006943) Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Cricetidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Prairie vole MODERN SPECIES 138 ENSMOCG00000000041 ENSMOCG00000000160 ENSMOCG00000000276 ENSMOCG00000000445 ENSMOCG00000022322 ##22 Pabpc5 (ENSMOCG00000001554) Lesser Egyptian jerboa MODERN SPECIES 43 Cnmd (ENSJJAG00000011534) Pcdh8 (ENSJJAG00000017606) Olfm4 (ENSJJAG00000018241) ENSJJAG00000022681 ENSJJAG00000024366 ENSJJAG00000009571 ENSJJAG00000021490 Pcdh17 (ENSJJAG00000015973) ENSJJAG00000017379 ENSJJAG00000023292 ENSJJAG00000016423 Diaph3 (ENSJJAG00000000502) Tdrd3 (ENSJJAG00000023665) ENSJJAG00000015296 ENSJJAG00000000679 ENSJJAG00000006345 ##22 Pcdh9 (ENSJJAG00000009893) ENSJJAG00000000702 ENSJJAG00000011337 Klhl1 (ENSJJAG00000011220) ENSJJAG00000001120 ENSJJAG00000017740 Dach1 (ENSJJAG00000000600) ENSJJAG00000016515 Bora (ENSJJAG00000022242) Dis3 (ENSJJAG00000011607) Pibf1 (ENSJJAG00000016369) Klf5 (ENSJJAG00000019003) Fundc2b (ENSJJAG00000018597) Klf12 (ENSJJAG00000020757) ENSJJAG00000012306 Primates ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.s.b ##22 Mas night monkey MODERN SPECIES 793 FXR1 (ENSANAG00000026001) DNAJC19 (ENSANAG00000023901) SOX2 (ENSANAG00000000047) ENSANAG00000023464 ##22 ENSANAG00000018148 ATP11B (ENSANAG00000033054) ENSANAG00000020880 MCCC1 (ENSANAG00000028235) LAMP3 (ENSANAG00000021411) MCF2L2 (ENSANAG00000030096) KLHL6 (ENSANAG00000034934) KLHL24 (ENSANAG00000030957) ENSANAG00000032967 YEATS2 (ENSANAG00000034729) MAP6D1 (ENSANAG00000031904) ENSANAG00000028369 ENSANAG00000032750 ABCC5 (ENSANAG00000022138) HTR3C (ENSANAG00000038263) Laurasiatheria ANCESTRAL SPECIES 18 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00940000163354 #36 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01090000261964 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01090000261964 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00940000163354 #36 Carnivora ANCESTRAL SPECIES 22 ENSGT00520000055666.a ENSGT00950000185460 ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 ENSGT00940000159966.A Felidae ANCESTRAL SPECIES 22 ENSGT00400000022168.a ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 ENSGT00940000159966.A Panthera ANCESTRAL SPECIES 16 ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT01020000230346.C.h.a.a.a.a ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 ENSGT00940000159966.A ENSGT00940000161506 ENSGT00990000211411 Panthera_a ANCESTRAL SPECIES 16 ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT01020000230346.C.h.a.a.a.a ENSGT00940000163183 ENSGT00390000012818.p ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 ENSGT00940000159966.A ENSGT00990000211411 ENSGT00730000111514 leopard MODERN SPECIES 172 ENSPPRG00000024542 GRINA (ENSPPRG00000024075) PLEC (ENSPPRG00000000838) ENSPPRG00000001341 PUF60 (ENSPPRG00000003257) SCRIB (ENSPPRG00000005252) FAM83H (ENSPPRG00000005660) #15 ENSPPRG00000006128 #16 CCDC166 (ENSPPRG00000006252) #17 ENSPPRG00000006461 ZNF623 (ENSPPRG00000017952) ENSPPRG00000006499 GFUS (ENSPPRG00000006571) #19 PYCR3 (ENSPPRG00000007124) #20 TIGD5 (ENSPPRG00000018004) ENSPPRG00000007970 #22 NAPRT (ENSPPRG00000008927) #23 GSDMD (ENSPPRG00000011299) #25 ZC3H3 (ENSPPRG00000011707) #26 RHPN1 (ENSPPRG00000014507) #27 ENSPPRG00000015929 ENSPPRG00000016348 #29 ENSPPRG00000016530 #29 GLI4 (ENSPPRG00000016835) #30 GPIHBP1 (ENSPPRG00000018096) #31 LY6H (ENSPPRG00000019245) #32 ENSPPRG00000019531 ENSPPRG00000022558 lion MODERN SPECIES 509 PUF60 (ENSPLOG00000000023) FAM83H (ENSPLOG00000000063) #15 MAPK15 (ENSPLOG00000000084) #16 ENSPLOG00000000096 #17 ENSPLOG00000000100 ZNF623 (ENSPLOG00000000106) ENSPLOG00000000114 GFUS (ENSPLOG00000000126) #19 PYCR3 (ENSPLOG00000000152) #20 TIGD5 (ENSPLOG00000000159) ENSPLOG00000000173 #22 NAPRT (ENSPLOG00000000197) #23 MROH6 (ENSPLOG00000000225) #24 GSDMD (ENSPLOG00000000236) #25 ZC3H3 (ENSPLOG00000000258) #26 RHPN1 (ENSPLOG00000000331) #27 ZNF696 (ENSPLOG00000000390) #29 GLI4 (ENSPLOG00000000413) #30 GPIHBP1 (ENSPLOG00000000429) #31 LY6H (ENSPLOG00000000443) #32 ENSPLOG00000000461 #33 LY6E (ENSPLOG00000000491) ##31 ENSPLOG00000000535 #36 GML (ENSPLOG00000000565) ENSPLOG00000000574 LY6D (ENSPLOG00000000589) Tiger MODERN SPECIES 358 SHARPIN (ENSPTIG00000016864) CYC1 (ENSPTIG00000017885) GPAA1 (ENSPTIG00000018654) EXOSC4 (ENSPTIG00000020006) SPATC1 (ENSPTIG00000020852) GRINA (ENSPTIG00000000243) ENSPTIG00000006447 ENSPTIG00000007265 PUF60 (ENSPTIG00000009795) ENSPTIG00000014644 ENSPTIG00000021194 #16 ENSPTIG00000001201 ZNF623 (ENSPTIG00000007289) GFUS (ENSPTIG00000006785) #19 PYCR3 (ENSPTIG00000009262) #20 ENSPTIG00000010781 #22 NAPRT (ENSPTIG00000013460) #23 ZC3H3 (ENSPTIG00000016438) #26 ENSPTIG00000017525 #27 ENSPTIG00000018176 ENSPTIG00000019116 GPIHBP1 (ENSPTIG00000020632) #31 LY6H (ENSPTIG00000021111) #32 ENSPTIG00000007419 #33 Cat MODERN SPECIES 249 OPLAH (ENSFCAG00000011543) SMPD5 (ENSFCAG00000052060) SPATC1 (ENSFCAG00000011539) GRINA (ENSFCAG00000026876) PLEC (ENSFCAG00000042897) ENSFCAG00000040788 PUF60 (ENSFCAG00000001045) SCRIB (ENSFCAG00000001044) FAM83H (ENSFCAG00000025159) #15 MAPK15 (ENSFCAG00000046313) #16 ENSFCAG00000042746 #17 ZNF623 (ENSFCAG00000041239) GFUS (ENSFCAG00000001041) #19 PYCR3 (ENSFCAG00000001040) #20 TIGD5 (ENSFCAG00000001039) EEF1D (ENSFCAG00000027237) #22 NAPRT (ENSFCAG00000001037) #23 MROH6 (ENSFCAG00000027723) #24 GSDMD (ENSFCAG00000013242) #25 ENSFCAG00000052780 ZC3H3 (ENSFCAG00000013238) #26 MAFA (ENSFCAG00000042412) ENSFCAG00000050951 ENSFCAG00000049557 RHPN1 (ENSFCAG00000010785) #27 ZNF696 (ENSFCAG00000044269) #29 GLI4 (ENSFCAG00000033573) #30 ZFP41 (ENSFCAG00000046632) GPIHBP1 (ENSFCAG00000043732) #31 LY6H (ENSFCAG00000010480) #32 LY6L (ENSFCAG00000043161) #33 Caniformia ANCESTRAL SPECIES 23 ENSGT00520000055666.a ENSGT00950000185460 ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 ENSGT00940000159966.A Caniformia_b ANCESTRAL SPECIES 22 ENSGT00520000055666.a ENSGT00950000185460 ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00940000161506 ENSGT00940000159966.A Ursidae DUPLICATION Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.c.a #22 Giant Panda MODERN SPECIES 1751 ENSAMEG00000027138 #22 Ursidae ANCESTRAL SPECIES 49 ENSGT00520000055666.a ENSGT00950000185460 ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.c.b #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 Giant Panda MODERN SPECIES 19 EXOSC4 (ENSAMEG00000006093) OPLAH (ENSAMEG00000006104) ENSAMEG00000006154 SPATC1 (ENSAMEG00000006165) GRINA (ENSAMEG00000029040) PLEC (ENSAMEG00000006191) ENSAMEG00000026841 NRBP2 (ENSAMEG00000006350) SCRIB (ENSAMEG00000006431) FAM83H (ENSAMEG00000030201) #15 MAPK15 (ENSAMEG00000006484) #16 ENSAMEG00000028835 #17 ZNF623 (ENSAMEG00000006529) GFUS (ENSAMEG00000006531) #19 TIGD5 (ENSAMEG00000029168) EEF1D (ENSAMEG00000006602) #22 NAPRT (ENSAMEG00000006608) #23 MROH6 (ENSAMEG00000006631) #24 GSDMD (ENSAMEG00000006635) #25 ENSAMEG00000006656 #26 ENSAMEG00000025392 ENSAMEG00000012490 ##31 ENSAMEG00000023725 #33 ENSAMEG00000012455 GML (ENSAMEG00000019421) ENSAMEG00000023640 LY6D (ENSAMEG00000031365) LYNX1 (ENSAMEG00000030855) SLURP2 (ENSAMEG00000001396) LYPD2 (ENSAMEG00000001400) SLURP1 (ENSAMEG00000001401) Ursus ANCESTRAL SPECIES 96 ENSGT00400000022168.a ENSGT00520000055666.a ENSGT00950000185460 ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a.c.b #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000154560.b #32 American black bear MODERN SPECIES 627 FAM83H (ENSUAMG00000012864) #15 MAPK15 (ENSUAMG00000012869) #16 ENSUAMG00000012873 #17 ZNF623 (ENSUAMG00000012875) ENSUAMG00000012882 #19 PYCR3 (ENSUAMG00000012891) #20 TIGD5 (ENSUAMG00000012895) EEF1D (ENSUAMG00000012897) #22 NAPRT (ENSUAMG00000012899) #23 MROH6 (ENSUAMG00000012903) #24 GSDMD (ENSUAMG00000012914) #25 ZC3H3 (ENSUAMG00000012919) #26 Polar bear MODERN SPECIES 516 SHARPIN (ENSUMAG00000020808) CYC1 (ENSUMAG00000020821) ENSUMAG00000020824 EXOSC4 (ENSUMAG00000020831) OPLAH (ENSUMAG00000020885) ENSUMAG00000021052 SPATC1 (ENSUMAG00000021054) ENSUMAG00000021059 NRBP2 (ENSUMAG00000000258) PUF60 (ENSUMAG00000000272) ENSUMAG00000000519 ZNF623 (ENSUMAG00000000693) GFUS (ENSUMAG00000000700) #19 ENSUMAG00000000714 #20 ENSUMAG00000000721 #20 ENSUMAG00000000728 #22 NAPRT (ENSUMAG00000000845) #23 GSDMD (ENSUMAG00000001062) #25 ZC3H3 (ENSUMAG00000001070) #26 RHPN1 (ENSUMAG00000001133) #27 ZNF696 (ENSUMAG00000001246) #29 ENSUMAG00000001260 #31 LY6H (ENSUMAG00000001269) #32 Ursidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.d #22 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1528 ENSAMEG00000031048 #22 Giant Panda MODERN SPECIES 1806 ENSAMEG00000030363 #22 Giant Panda MODERN SPECIES 1676 ENSAMEG00000026026 #22 Mustelinae ANCESTRAL SPECIES 91 ENSGT00390000013685 ENSGT00940000153348.B ENSGT00390000013463 ENSGT00400000022168.a ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00940000161506 American mink DUPLICATION American mink MODERN SPECIES 38 ENSNVIG00000003646 ENSNVIG00000003635 ENSNVIG00000003628 ENSNVIG00000003621 ENSNVIG00000003594 GABRR3 (ENSNVIG00000003577) ENSNVIG00000003532 ENSNVIG00000003507 ARL6 (ENSNVIG00000003444) EPHA6 (ENSNVIG00000003420) ENSNVIG00000003390 ENSNVIG00000003383 #22 NSUN3 (ENSNVIG00000003347) STX19 (ENSNVIG00000003337) ARL13B (ENSNVIG00000003268) PROS1 (ENSNVIG00000003174) EPHA3 (ENSNVIG00000003087) ENSNVIG00000003051 C3orf38 (ENSNVIG00000003029) ZNF654 (ENSNVIG00000003008) CGBP1 (ENSNVIG00000003003) HTR1F (ENSNVIG00000002994) POU1F1 (ENSNVIG00000002958) CHMP2B (ENSNVIG00000002896) ENSNVIG00000002892 VGLL3 (ENSNVIG00000002878) CADM2 (ENSNVIG00000002788) American mink MODERN SPECIES 551 NRBP2 (ENSNVIG00000008328) PUF60 (ENSNVIG00000008683) SCRIB (ENSNVIG00000008912) FAM83H (ENSNVIG00000010453) #15 MAPK15 (ENSNVIG00000010460) #16 ZNF623 (ENSNVIG00000010487) GFUS (ENSNVIG00000010493) #19 PYCR3 (ENSNVIG00000010514) #20 ENSNVIG00000010553 #22 ZC3H3 (ENSNVIG00000010624) #26 MAFA (ENSNVIG00000010654) ENSNVIG00000010668 #27 ZNF696 (ENSNVIG00000010681) #29 GLI4 (ENSNVIG00000010691) #30 ZFP41 (ENSNVIG00000010717) GPIHBP1 (ENSNVIG00000010726) #31 LY6H (ENSNVIG00000010743) #32 LY6L (ENSNVIG00000010760) #33 ENSNVIG00000010781 ENSNVIG00000010794 Ferret DUPLICATION Ferret MODERN SPECIES 467 EXOSC4 (ENSMPUG00000007260) OPLAH (ENSMPUG00000007266) ENSMPUG00000007287 SPATC1 (ENSMPUG00000007295) GRINA (ENSMPUG00000007320) PLEC (ENSMPUG00000007329) ENSMPUG00000020168 NRBP2 (ENSMPUG00000008013) PUF60 (ENSMPUG00000008137) SCRIB (ENSMPUG00000008151) FAM83H (ENSMPUG00000008168) #15 MAPK15 (ENSMPUG00000008183) #16 ZNF623 (ENSMPUG00000020169) GFUS (ENSMPUG00000008243) #19 PYCR3 (ENSMPUG00000008251) #20 ENSMPUG00000008287 #22 NAPRT (ENSMPUG00000008297) #23 ENSMPUG00000008307 #25 ZC3H3 (ENSMPUG00000008357) #26 ENSMPUG00000008372 RHPN1 (ENSMPUG00000008382) #27 ENSMPUG00000008485 GLI4 (ENSMPUG00000008492) #30 ENSMPUG00000008500 GPIHBP1 (ENSMPUG00000008502) #31 LY6H (ENSMPUG00000008510) #32 LY6E (ENSMPUG00000008536) ##31 ENSMPUG00000008567 #33 Ferret MODERN SPECIES 339 ENSMPUG00000019865 ENSMPUG00000002540 ENSMPUG00000002544 ENSMPUG00000019866 ENSMPUG00000019867 ENSMPUG00000019868 ENSMPUG00000002546 ENSMPUG00000002549 GABRR3 (ENSMPUG00000002553) RIOX2 (ENSMPUG00000002609) ENSMPUG00000002617 ARL6 (ENSMPUG00000002675) EPHA6 (ENSMPUG00000002679) ENSMPUG00000019869 ENSMPUG00000002693 ENSMPUG00000002702 #22 NSUN3 (ENSMPUG00000002722) ARL13B (ENSMPUG00000002726) STX19 (ENSMPUG00000019870) PROS1 (ENSMPUG00000002727) Canidae ANCESTRAL SPECIES 33 ENSGT00400000022168.a ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 ENSGT00940000159966.A Red fox MODERN SPECIES 251 CYC1 (ENSVVUG00000009653) GPAA1 (ENSVVUG00000009667) EXOSC4 (ENSVVUG00000009675) SPATC1 (ENSVVUG00000009880) ENSVVUG00000009887 PLEC (ENSVVUG00000010214) ENSVVUG00000022500 NRBP2 (ENSVVUG00000022506) PUF60 (ENSVVUG00000022527) SCRIB (ENSVVUG00000022534) ENSVVUG00000022548 #15 MAPK15 (ENSVVUG00000022543) #16 ZNF623 (ENSVVUG00000022555) TSTA3 (ENSVVUG00000022556) #19 PYCR3 (ENSVVUG00000022559) #20 ENSVVUG00000022562 #22 NAPRT (ENSVVUG00000022569) #23 MROH6 (ENSVVUG00000022579) #24 GSDMD (ENSVVUG00000022593) #25 ZC3H3 (ENSVVUG00000022609) #26 RHPN1 (ENSVVUG00000022643) #27 ZNF696 (ENSVVUG00000022650) #29 ENSVVUG00000022654 ENSVVUG00000022662 #31 LY6H (ENSVVUG00000022664) #32 ENSVVUG00000022668 ##31 ENSVVUG00000022669 ENSVVUG00000022673 ENSVVUG00000022678 Canis_lupus ANCESTRAL SPECIES 19 ENSGT00400000022168.a ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000159966.B ENSGT00940000161506 Dog MODERN SPECIES 4 EXOSC4 (ENSCAFG00845007577) OPLAH (ENSCAFG00845007462) SMPD5 (ENSCAFG00845007381) ENSCAFG00845007196 PLEC (ENSCAFG00845006165) NRBP2 (ENSCAFG00845005761) PUF60 (ENSCAFG00845005630) SCRIB (ENSCAFG00845016531) FAM83H (ENSCAFG00845016203) #15 MAPK15 (ENSCAFG00845016101) #16 ENSCAFG00845016076 #17 ZNF623 (ENSCAFG00845016043) TSTA3 (ENSCAFG00845015979) #19 PYCR3 (ENSCAFG00845015775) #20 TIGD5 (ENSCAFG00845015729) EEF1D (ENSCAFG00845015590) #22 NAPRT (ENSCAFG00845015437) #23 MROH6 (ENSCAFG00845015361) #24 GSDMD (ENSCAFG00845015279) #25 ZC3H3 (ENSCAFG00845015168) #26 MAFA (ENSCAFG00845015129) RHPN1 (ENSCAFG00845015006) #27 ENSCAFG00845014905 #30 ZFP41 (ENSCAFG00845014842) GPIHBP1 (ENSCAFG00845014814) #31 LY6H (ENSCAFG00845014780) #32 ENSCAFG00845014647 #33 LY6E (ENSCAFG00845014604) ##31 ENSCAFG00845014541 ENSCAFG00845014518 ENSCAFG00845014500 Dingo MODERN SPECIES 88 SPATC1 (ENSCAFG00020018794) GRINA (ENSCAFG00020018791) ENSCAFG00020018787 PLEC (ENSCAFG00020018777) EPPK1 (ENSCAFG00020018775) NRBP2 (ENSCAFG00020018770) PUF60 (ENSCAFG00020018754) ENSCAFG00020018744 FAM83H (ENSCAFG00020018741) #15 MAPK15 (ENSCAFG00020018736) #16 ENSCAFG00020018733 #17 ZNF623 (ENSCAFG00020018732) GFUS (ENSCAFG00020018688) #19 PYCR3 (ENSCAFG00020018685) #20 TIGD5 (ENSCAFG00020018684) ENSCAFG00020018677 #22 NAPRT (ENSCAFG00020018667) #23 MROH6 (ENSCAFG00020018660) #24 GSDMD (ENSCAFG00020018657) #25 ZC3H3 (ENSCAFG00020018654) #26 RHPN1 (ENSCAFG00020018648) #27 ZNF696 (ENSCAFG00020018647) #29 GLI4 (ENSCAFG00020018643) #30 ZFP41 (ENSCAFG00020018640) GPIHBP1 (ENSCAFG00020018637) #31 LY6H (ENSCAFG00020018633) #32 LY6E (ENSCAFG00020018630) ##31 ENSCAFG00020018627 #33 ENSCAFG00020018614 ENSCAFG00020018611 ENSCAFG00020018609 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01090000261964 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Equus ANCESTRAL SPECIES 14 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01090000261964 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Horse MODERN SPECIES 30 GRINA (ENSECAG00000006162) PARP10A (ENSECAG00000019881) PLEC (ENSECAG00000015514) NRBP2 (ENSECAG00000009940) PUF60 (ENSECAG00000024681) SCRIB (ENSECAG00000013823) FAM83H (ENSECAG00000001411) #15 MAPK15 (ENSECAG00000055407) #16 CCDC166 (ENSECAG00000043083) #17 ENSECAG00000012218 ZNF623 (ENSECAG00000001299) ENSECAG00000058513 #29 GFUS (ENSECAG00000022267) #19 PYCR3 (ENSECAG00000019384) #20 ENSECAG00000035597 EEF1D (ENSECAG00000007976) #22 NAPRT (ENSECAG00000018111) #23 MROH6 (ENSECAG00000032692) #24 TIGD5 (ENSECAG00000030758) ZC3H3 (ENSECAG00000012556) #26 MAFA (ENSECAG00000031791) RHPN1 (ENSECAG00000023361) #27 TOP1MT (ENSECAG00000013129) #28 ENSECAG00000059385 ZNF696 (ENSECAG00000012444) #29 ENSECAG00000046889 GLI4 (ENSECAG00000028286) #30 ENSECAG00000034775 #29 GPIHBP1 (ENSECAG00000010834) #31 LY6H (ENSECAG00000007774) #32 LY6L (ENSECAG00000028100) #33 Donkey MODERN SPECIES 3 GRINA (ENSEASG00005009735) PLEC (ENSEASG00005009714) ENSEASG00005035365 ENSEASG00005009702 PUF60 (ENSEASG00005009695) FAM83H (ENSEASG00005009670) #15 SCRIB (ENSEASG00005009676) ENSEASG00005009666 #16 CCDC166 (ENSEASG00005035820) #17 ENSEASG00005024520 ZNF623 (ENSEASG00005033703) ENSEASG00005029910 #29 GFUS (ENSEASG00005009659) #19 PYCR3 (ENSEASG00005009658) #20 TIGD5 (ENSEASG00005035122) EEF1D (ENSEASG00005009652) #22 ENSEASG00005030288 NAPRT (ENSEASG00005009637) #23 MROH6 (ENSEASG00005009627) #24 GSDMD (ENSEASG00005009624) #25 ZC3H3 (ENSEASG00005009621) #26 MAFA (ENSEASG00005038264) RHPN1 (ENSEASG00005009616) #27 ENSEASG00005009563 #28 ZNF696 (ENSEASG00005009557) #29 ENSEASG00005027600 GLI4 (ENSEASG00005025043) #30 ENSEASG00005038041 #29 GPIHBP1 (ENSEASG00005023700) #31 LY6H (ENSEASG00005009553) #32 LY6L (ENSEASG00005026892) #33 Chiroptera ANCESTRAL SPECIES 27 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 ENSGT00940000159966.A Megabat MODERN SPECIES 3873 GFUS (ENSPVAG00000006002) #19 PYCR3 (ENSPVAG00000005997) #20 TIGD5 (ENSPVAG00000005993) EEF1D (ENSPVAG00000005990) #22 MROH6 (ENSPVAG00000005985) #24 GSDMD (ENSPVAG00000005980) #25 ZC3H3 (ENSPVAG00000005979) #26 Microchiroptera ANCESTRAL SPECIES 27 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 ENSGT00940000159966.A Greater horseshoe bat MODERN SPECIES 5 SPATC1 (ENSRFEG00010019364) GRINA (ENSRFEG00010019334) PARP10 (ENSRFEG00010019148) PLEC (ENSRFEG00010018286) ENSRFEG00010018111 NRBP2 (ENSRFEG00010018055) PUF60 (ENSRFEG00010017712) SCRIB (ENSRFEG00010017571) IQANK1 (ENSRFEG00010017516) FAM83H (ENSRFEG00010017388) #15 ENSRFEG00010017348 #17 MAPK15 (ENSRFEG00010017242) #16 GFUS (ENSRFEG00010017180) #19 PYCR3 (ENSRFEG00010017055) #20 TIGD5 (ENSRFEG00010017037) EEF1D (ENSRFEG00010016844) #22 NAPRT (ENSRFEG00010016331) #23 MROH6 (ENSRFEG00010016108) #24 GSDMD (ENSRFEG00010016049) #25 ZC3H3 (ENSRFEG00010015846) #26 MAFA (ENSRFEG00010015820) RHPN1 (ENSRFEG00010015586) #27 ZNF696 (ENSRFEG00010015549) #29 GLI4 (ENSRFEG00010015440) #30 ZFP41 (ENSRFEG00010015401) ENSRFEG00010015372 #31 LY6H (ENSRFEG00010015290) #32 LY6L (ENSRFEG00010015235) #33 LY6E (ENSRFEG00010015156) ##31 ENSRFEG00010015064 GML (ENSRFEG00010014964) Microbat MODERN SPECIES 2322 ZNF623 (ENSMLUG00000002296) GFUS (ENSMLUG00000008493) #19 PYCR3 (ENSMLUG00000008482) #20 ENSMLUG00000011005 #22 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01090000261964 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Suina ANCESTRAL SPECIES 49 ENSGT01050000244890.a.a.a ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT01090000261964 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 Pig MODERN SPECIES 12 SPATC1 (ENSSSCG00000005923) GRINA (ENSSSCG00000032796) PLEC (ENSSSCG00000039094) ENSSSCG00000062085 NRBP2 (ENSSSCG00000038025) PUF60 (ENSSSCG00000038800) SCRIB (ENSSSCG00000039466) IQANK1 (ENSSSCG00000034987) FAM83H (ENSSSCG00000036964) #15 MAPK15 (ENSSSCG00000035933) #16 ENSSSCG00000037038 #17 ZNF623 (ENSSSCG00000039679) GFUS (ENSSSCG00000031698) #19 PYCR3 (ENSSSCG00000032763) #20 TIGD5 (ENSSSCG00000040119) EEF1D (ENSSSCG00000006954) #22 NAPRT (ENSSSCG00000055397) #23 MROH6 (ENSSSCG00000006948) #24 GSDMD (ENSSSCG00000006955) #25 ZC3H3 (ENSSSCG00000006956) #26 MAFA (ENSSSCG00000034820) RHPN1 (ENSSSCG00000006957) #27 TOP1MT (ENSSSCG00000006958) #28 ZNF696 (ENSSSCG00000006959) #29 GLI4 (ENSSSCG00000039881) #30 GPIHBP1 (ENSSSCG00000034689) #31 LY6H (ENSSSCG00000033353) #32 LY6L (ENSSSCG00000053802) #33 LY6E (ENSSSCG00000040535) ##31 ENSSSCG00000031205 ENSSSCG00000031563 Chacoan peccary MODERN SPECIES 930 NRBP2 (ENSCWAG00000009761) PUF60 (ENSCWAG00000009070) SCRIB (ENSCWAG00000008827) FAM83H (ENSCWAG00000008549) #15 ZNF623 (ENSCWAG00000008437) GFUS (ENSCWAG00000008386) #19 ENSCWAG00000008347 #20 TIGD5 (ENSCWAG00000008332) ENSCWAG00000008289 ENSCWAG00000008255 #22 NAPRT (ENSCWAG00000007835) #23 Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Camelidae ANCESTRAL SPECIES 19 ENSGT00940000162035 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000159966.A ENSGT00940000161506 Arabian camel MODERN SPECIES 17 ENSCDRG00005009748 NRBP2 (ENSCDRG00005009250) PUF60 (ENSCDRG00005007981) SCRIB (ENSCDRG00005007090) FAM83H (ENSCDRG00005007046) #15 ENSCDRG00005007032 ENSCDRG00005006989 #16 ENSCDRG00005006949 ENSCDRG00005006897 #17 ZNF623 (ENSCDRG00005006881) ENSCDRG00005015450 #29 GFUS (ENSCDRG00005015411) #19 PYCR3 (ENSCDRG00005015342) #20 TIGD5 (ENSCDRG00005015329) ENSCDRG00005015307 EEF1D (ENSCDRG00005015097) #22 NAPRT (ENSCDRG00005014757) #23 MROH6 (ENSCDRG00005014601) #24 GSDMD (ENSCDRG00005014546) #25 ZC3H3 (ENSCDRG00005014429) #26 MAFA (ENSCDRG00005014370) RHPN1 (ENSCDRG00005014308) #27 ENSCDRG00005014284 #28 ZNF696 (ENSCDRG00005014265) #29 GLI4 (ENSCDRG00005014170) #30 GPIHBP1 (ENSCDRG00005014041) #31 LY6H (ENSCDRG00005013990) #32 LY6L (ENSCDRG00005013971) #33 LY6E (ENSCDRG00005013838) ##31 GML (ENSCDRG00005013809) ENSCDRG00005013756 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Pecora ANCESTRAL SPECIES 20 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Yarkand deer MODERN SPECIES 13 GRINA (ENSCHYG00000012311) PARP10 (ENSCHYG00000012379) PLEC (ENSCHYG00000012577) NRBP2 (ENSCHYG00000013638) PUF60 (ENSCHYG00000014014) SCRIB (ENSCHYG00000015104) IQANK1 (ENSCHYG00000015525) FAM83H (ENSCHYG00000015696) #15 MAPK15 (ENSCHYG00000015791) #16 CCDC166 (ENSCHYG00000015968) #17 ZNF623 (ENSCHYG00000016014) ENSCHYG00000016074 #29 GFUS (ENSCHYG00000016178) #19 PYCR3 (ENSCHYG00000016325) #20 TIGD5 (ENSCHYG00000016566) ENSCHYG00000016622 #22 NAPRT (ENSCHYG00000016943) #23 MROH6 (ENSCHYG00000017175) #24 GSDMD (ENSCHYG00000017506) #25 ZC3H3 (ENSCHYG00000017811) #26 MAFA (ENSCHYG00000017958) RHPN1 (ENSCHYG00000018008) #27 ZNF696 (ENSCHYG00000018088) #29 GLI4 (ENSCHYG00000018122) #30 ENSCHYG00000013545 ENSCHYG00000013594 #32 LY6L (ENSCHYG00000013694) #33 ENSCHYG00000013741 ##31 ENSCHYG00000013844 ENSCHYG00000013816 ENSCHYG00000013884 Percora_a ANCESTRAL SPECIES 23 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Siberian musk deer MODERN SPECIES 1204 OPLAH (ENSMMSG00000020069) ENSMMSG00000020029 SPATC1 (ENSMMSG00000019996) GRINA (ENSMMSG00000019971) PARP10 (ENSMMSG00000019945) NRBP2 (ENSMMSG00000019766) PUF60 (ENSMMSG00000019612) SCRIB (ENSMMSG00000019258) FAM83H (ENSMMSG00000019157) #15 MAPK15 (ENSMMSG00000019099) #16 ENSMMSG00000019073 #17 ZNF623 (ENSMMSG00000019059) GFUS (ENSMMSG00000019014) #19 PYCR3 (ENSMMSG00000018935) #20 TIGD5 (ENSMMSG00000018919) ENSMMSG00000018709 #22 NAPRT (ENSMMSG00000018644) #23 MROH6 (ENSMMSG00000018575) #24 GSDMD (ENSMMSG00000018522) #25 ZC3H3 (ENSMMSG00000018484) #26 MAFA (ENSMMSG00000018472) RHPN1 (ENSMMSG00000018400) #27 ENSMMSG00000018346 #28 ZNF696 (ENSMMSG00000018336) #29 GLI4 (ENSMMSG00000018300) #30 ENSMMSG00000018257 #31 LY6H (ENSMMSG00000018217) #32 LY6L (ENSMMSG00000014617) #33 LY6E (ENSMMSG00000014580) ##31 GML (ENSMMSG00000014555) ENSMMSG00000014506 #36 Bovidae ANCESTRAL SPECIES 22 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Bovinae ANCESTRAL SPECIES 18 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Bos ANCESTRAL SPECIES 21 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506 Bos_b ANCESTRAL SPECIES 43 ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506.x Cow MODERN SPECIES 5 PARP10 (ENSBTAG00000009677) PLEC (ENSBTAG00000011922) EPPK1 (ENSBTAG00000045727) NRBP2 (ENSBTAG00000008079) PUF60 (ENSBTAG00000037493) SCRIB (ENSBTAG00000008421) IQANK1 (ENSBTAG00000048486) FAM83H (ENSBTAG00000038682) #15 MAPK15 (ENSBTAG00000019864) #16 CCDC166 (ENSBTAG00000040360) #17 ZNF623 (ENSBTAG00000045791) ENSBTAG00000052472 #29 GFUS (ENSBTAG00000034691) #19 PYCR3 (ENSBTAG00000016810) #20 TIGD5 (ENSBTAG00000048160) EEF1D (ENSBTAG00000014643) #22 NAPRT (ENSBTAG00000014642) #23 MROH6 (ENSBTAG00000034613) #24 GSDMD (ENSBTAG00000021474) #25 ZC3H3 (ENSBTAG00000021472) #26 MAFA (ENSBTAG00000026344) RHPN1 (ENSBTAG00000002104) #27 TOP1MT (ENSBTAG00000053896) #28 ZNF696 (ENSBTAG00000049014) #29 GLI4 (ENSBTAG00000003606) #30 GPIHBP1 (ENSBTAG00000049125) #31 LY6H (ENSBTAG00000011939) #32 LY6E (ENSBTAG00000017040) ##31 ENSBTAG00000004596 GML (ENSBTAG00000004595) CYP11B1 (ENSBTAG00000054126) Hybrid Bos Indicus MODERN SPECIES 5 PLEC (ENSBIXG00005006765) ENSBIXG00005029794 ENSBIXG00005029811 ENSBIXG00005029820 ENSBIXG00005029835 PUF60 (ENSBIXG00005029853) SCRIB (ENSBIXG00005029884) FAM83H (ENSBIXG00005029924) #15 ENSBIXG00005029936 #16 ENSBIXG00005029950 #17 ZNF623 (ENSBIXG00005029955) ENSBIXG00005029964 #29 GFUS (ENSBIXG00005029985) #19 PYCR3 (ENSBIXG00005030011) #20 TIGD5 (ENSBIXG00005030024) ENSBIXG00005030062 #22 NAPRT (ENSBIXG00005030133) #23 MROH6 (ENSBIXG00005030160) #24 GSDMD (ENSBIXG00005030192) #25 ZC3H3 (ENSBIXG00005030225) #26 MAFA (ENSBIXG00005030239) RHPN1 (ENSBIXG00005030249) #27 ENSBIXG00005030263 ENSBIXG00005030272 #28 ZNF696 (ENSBIXG00005030285) #29 GLI4 (ENSBIXG00005030297) #30 ENSBIXG00005030310 #29 ENSBIXG00005030330 #31 LY6H (ENSBIXG00005030344) #32 LY6L (ENSBIXG00005030354) #33 ENSBIXG00005030371 Bos_a ANCESTRAL SPECIES 43 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000163493.g.b #29 ENSGT00910000147678 ENSGT00960000190596 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000159966.A Wild yak MODERN SPECIES 168 PUF60 (ENSBMUG00000012511) SCRIB (ENSBMUG00000013981) IQANK1 (ENSBMUG00000015402) FAM83H (ENSBMUG00000015418) #15 MAPK15 (ENSBMUG00000015448) #16 ENSBMUG00000015473 #17 ZNF623 (ENSBMUG00000015485) ENSBMUG00000015500 #29 GFUS (ENSBMUG00000015516) #19 ENSBMUG00000015526 #20 EEF1D (ENSBMUG00000015575) #22 NAPRT (ENSBMUG00000015595) #23 GSDMD (ENSBMUG00000015651) #25 ZC3H3 (ENSBMUG00000015678) #26 RHPN1 (ENSBMUG00000015761) #27 ZNF696 (ENSBMUG00000015806) #29 ENSBMUG00000015811 ENSBMUG00000015841 LY6H (ENSBMUG00000015851) #32 LY6L (ENSBMUG00000015869) #33 LY6E (ENSBMUG00000015897) ##31 Domestic yak MODERN SPECIES 9 ENSBGRG00000010528 SPATC1 (ENSBGRG00000010414) GRINA (ENSBGRG00000010363) PARP10 (ENSBGRG00000010159) PLEC (ENSBGRG00000007959) ENSBGRG00000007510 ENSBGRG00000007392 PUF60 (ENSBGRG00000007018) FAM83H (ENSBGRG00000005952) #15 MAPK15 (ENSBGRG00000005786) #16 ZNF623 (ENSBGRG00000005671) GFUS (ENSBGRG00000005617) #19 ENSBGRG00000005589 #20 TIGD5 (ENSBGRG00000005583) ENSBGRG00000005570 ENSBGRG00000005433 #22 NAPRT (ENSBGRG00000005281) #23 MROH6 (ENSBGRG00000005185) #24 GSDMD (ENSBGRG00000005118) #25 ZC3H3 (ENSBGRG00000005085) #26 MAFA (ENSBGRG00000005073) RHPN1 (ENSBGRG00000005027) #27 ZNF696 (ENSBGRG00000004992) #29 GLI4 (ENSBGRG00000004935) #30 ENSBGRG00000004913 #29 ENSBGRG00000004901 LY6H (ENSBGRG00000004864) #32 LY6L (ENSBGRG00000004838) #33 LY6E (ENSBGRG00000004776) ##31 GML (ENSBGRG00000004405) ENSBGRG00000004382 American bison MODERN SPECIES 1509 ENSBBBG00000000473 #22 ENSBBBG00000023108 #23 Caprinae ANCESTRAL SPECIES 18 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000161506.u ENSGT00940000159966.A ENSGT00940000161506.v Goat MODERN SPECIES 5 CYC1 (ENSCHIG00000017517) GPAA1 (ENSCHIG00000015619) EXOSC4 (ENSCHIG00000021121) OPLAH (ENSCHIG00000016629) ENSCHIG00000022139 SPATC1 (ENSCHIG00000012865) GRINA (ENSCHIG00000002881) PARP10 (ENSCHIG00000008072) PLEC (ENSCHIG00000022260) MAPK15 (ENSCHIG00000022294) #16 ENSCHIG00000026180 #17 ZNF623 (ENSCHIG00000009581) GFUS (ENSCHIG00000008339) #19 PYCR3 (ENSCHIG00000016380) #20 TIGD5 (ENSCHIG00000012655) EEF1D (ENSCHIG00000011578) #22 NAPRT (ENSCHIG00000014486) #23 MROH6 (ENSCHIG00000014989) #24 GSDMD (ENSCHIG00000010774) #25 ZC3H3 (ENSCHIG00000018027) #26 MAFA (ENSCHIG00000005605) RHPN1 (ENSCHIG00000024825) #27 GLI4 (ENSCHIG00000012546) #30 ENSCHIG00000012518 LY6H (ENSCHIG00000016146) #32 ENSCHIG00000011049 LY6E (ENSCHIG00000005488) ##31 CYP11B1 (ENSCHIG00000012278) GML (ENSCHIG00000015469) ENSCHIG00000021920 LYNX1 (ENSCHIG00000014052) Rambouillet Sheep MODERN SPECIES 25 SPATC1 (ENSOARG00020005912) GRINA (ENSOARG00020006124) PARP10 (ENSOARG00020006150) PLEC (ENSOARG00020006299) EPPK1 (ENSOARG00020008171) NRBP2 (ENSOARG00020008343) PUF60 (ENSOARG00020009796) SCRIB (ENSOARG00020010125) FAM83H (ENSOARG00020011357) #15 MAPK15 (ENSOARG00020011493) #16 ENSOARG00020011643 #17 ZNF623 (ENSOARG00020011670) GFUS (ENSOARG00020011707) #19 ENSOARG00020011809 #20 TIGD5 (ENSOARG00020011847) EEF1D (ENSOARG00020011880) #22 NAPRT (ENSOARG00020012136) #23 GSDMD (ENSOARG00020012485) #25 MAFA (ENSOARG00020012656) ZNF696 (ENSOARG00020012704) #29 GLI4 (ENSOARG00020012749) #30 GPIHBP1 (ENSOARG00020012887) #31 LY6H (ENSOARG00020012951) #32 LY6L (ENSOARG00020013022) #33 LY6E (ENSOARG00020013083) ##31 CYP11B1 (ENSOARG00020013254) GML (ENSOARG00020013648) ENSOARG00020013707 LY6D (ENSOARG00020013889) ENSOARG00020013946 LYPD2 (ENSOARG00020013987) Cetacea ANCESTRAL SPECIES 17 ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00940000163493.g.a #29 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Blue whale DUPLICATION Blue whale MODERN SPECIES 12 RHBDL3 (ENSBMSG00010016026) C17orf75 (ENSBMSG00010015998) ZNF207 (ENSBMSG00010015813) PSMD11 (ENSBMSG00010015716) CDK5R1 (ENSBMSG00010015699) MYO1D (ENSBMSG00010015533) TMEM98 (ENSBMSG00010015458) SPACA3 (ENSBMSG00010015398) ASIC2 (ENSBMSG00010015290) CCL2 (ENSBMSG00010015239) CCL7 (ENSBMSG00010015213) CCL11 (ENSBMSG00010015194) CCL8 (ENSBMSG00010015171) CCL1 (ENSBMSG00010015132) TMEM132E (ENSBMSG00010015019) ENSBMSG00010014985 #22 ZNF830 (ENSBMSG00010014976) LIG3 (ENSBMSG00010014942) RFFL (ENSBMSG00010014852) RAD51D (ENSBMSG00010014782) FNDC8 (ENSBMSG00010014750) NLE1 (ENSBMSG00010014584) UNC45B (ENSBMSG00010014269) ENSBMSG00010014205 ENSBMSG00010014181 SLFN14 (ENSBMSG00010014153) PEX12 (ENSBMSG00010014124) ENSBMSG00010014086 AP2B1 (ENSBMSG00010014021) RASL10B (ENSBMSG00010013977) GAS2L2 (ENSBMSG00010013934) Blue whale MODERN SPECIES 8 GRINA (ENSBMSG00010017488) PARP10 (ENSBMSG00010017529) PLEC (ENSBMSG00010018023) NRBP2 (ENSBMSG00010018834) PUF60 (ENSBMSG00010019365) SCRIB (ENSBMSG00010019548) FAM83H (ENSBMSG00010020169) #15 MAPK15 (ENSBMSG00010020204) #16 ENSBMSG00010020253 #17 ENSBMSG00010020269 ZNF623 (ENSBMSG00010020285) ENSBMSG00010020292 #29 ENSBMSG00010020314 #19 PYCR3 (ENSBMSG00010020364) #20 TIGD5 (ENSBMSG00010020386) ENSBMSG00010020423 #22 NAPRT (ENSBMSG00010020480) #23 MROH6 (ENSBMSG00010020556) #24 GSDMD (ENSBMSG00010020619) #25 ZC3H3 (ENSBMSG00010013109) #26 MAFA (ENSBMSG00010013122) RHPN1 (ENSBMSG00010013165) #27 TOP1MT (ENSBMSG00010013264) #28 ZNF696 (ENSBMSG00010013287) #29 GLI4 (ENSBMSG00010013296) #30 ZFP41 (ENSBMSG00010013308) GPIHBP1 (ENSBMSG00010013321) #31 LY6H (ENSBMSG00010013334) #32 LY6L (ENSBMSG00010013356) #33 ENSBMSG00010013369 ##31 ENSBMSG00010013379 Odontoceti ANCESTRAL SPECIES 20 ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b ##31 ENSGT00940000163354 #36 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 6 HGH1 (ENSPCTG00005010845) WDR97 (ENSPCTG00005010888) MAF1 (ENSPCTG00005011182) SHARPIN (ENSPCTG00005011225) CYC1 (ENSPCTG00005011306) ENSPCTG00005011335 SPATC1 (ENSPCTG00005011377) ENSPCTG00005011515 ENSPCTG00005011594 #17 FAM83H (ENSPCTG00005011914) #15 SCRIB (ENSPCTG00005012070) PUF60 (ENSPCTG00005012237) PLEC (ENSPCTG00005012403) ENSPCTG00005013092 #20 TIGD5 (ENSPCTG00005013135) EEF1D (ENSPCTG00005013195) #22 NAPRT (ENSPCTG00005013607) #23 GSDMD (ENSPCTG00005014025) #25 ZC3H3 (ENSPCTG00005014077) #26 TOP1MT (ENSPCTG00005014111) #28 ZNF696 (ENSPCTG00005014299) #29 GLI4 (ENSPCTG00005014326) #30 ZFP41 (ENSPCTG00005014395) LY6H (ENSPCTG00005014505) #32 LY6E (ENSPCTG00005014593) ##31 ENSPCTG00005014680 #36 ENSPCTG00005014909 ENSPCTG00005014963 TSNARE1 (ENSPCTG00005014986) ADGRB1 (ENSPCTG00005015167) ARC (ENSPCTG00005015916) Sperm whale MODERN SPECIES 5 C14H17orf75 (ENSPCTG00005011314) ZNF207 (ENSPCTG00005011440) PSMD11 (ENSPCTG00005011616) CDK5R1 (ENSPCTG00005011765) MYO1D (ENSPCTG00005011821) TMEM98 (ENSPCTG00005012148) SPACA3 (ENSPCTG00005012213) ASIC2 (ENSPCTG00005012341) CCL2 (ENSPCTG00005012569) CCL11 (ENSPCTG00005012625) ENSPCTG00005012666 CCL13 (ENSPCTG00005012690) CCL1 (ENSPCTG00005012728) TMEM132E (ENSPCTG00005012754) ENSPCTG00005012970 ENSPCTG00005013032 #22 ENSPCTG00005013042 LIG3 (ENSPCTG00005013330) RFFL (ENSPCTG00005013449) ENSPCTG00005013530 ENSPCTG00005013587 ENSPCTG00005013754 SLFN12 (ENSPCTG00005013784) SLFN11 (ENSPCTG00005013804) SLFN14 (ENSPCTG00005013867) ENSPCTG00005013925 PEX12 (ENSPCTG00005013981) AP2B1 (ENSPCTG00005014049) RASL10B (ENSPCTG00005014172) GAS2L2 (ENSPCTG00005014226) ENSPCTG00005014431 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b.e ##31 ENSGT00940000163354 #36 Dolphin MODERN SPECIES 3236 FAM83H (ENSTTRG00000015190) #15 MAPK15 (ENSTTRG00000015189) #16 GFUS (ENSTTRG00000015184) #19 PYCR3 (ENSTTRG00000015176) #20 TIGD5 (ENSTTRG00000015171) EEF1D (ENSTTRG00000015166) #22 NAPRT (ENSTTRG00000015149) #23 ENSTTRG00000015135 #24 GSDMD (ENSTTRG00000015127) #25 ZC3H3 (ENSTTRG00000015117) #26 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b.e ##31 ENSGT00940000163354 #36 Vaquita DUPLICATION Vaquita MODERN SPECIES 8 SPATC1 (ENSPSNG00000020830) ENSPSNG00000020800 GRINA (ENSPSNG00000020762) PARP10 (ENSPSNG00000020690) PLEC (ENSPSNG00000020200) ENSPSNG00000020098 PUF60 (ENSPSNG00000019982) SCRIB (ENSPSNG00000019007) FAM83H (ENSPSNG00000018798) #15 MAPK15 (ENSPSNG00000018505) #16 ENSPSNG00000018485 #17 ZNF623 (ENSPSNG00000018461) GFUS (ENSPSNG00000018379) #19 PYCR3 (ENSPSNG00000018311) #20 TIGD5 (ENSPSNG00000018290) ENSPSNG00000018101 #22 NAPRT (ENSPSNG00000018029) #23 GSDMD (ENSPSNG00000017996) #25 ZC3H3 (ENSPSNG00000017962) #26 MAFA (ENSPSNG00000017944) RHPN1 (ENSPSNG00000017253) #27 TOP1MT (ENSPSNG00000017042) #28 ZNF696 (ENSPSNG00000017016) #29 GLI4 (ENSPSNG00000016935) #30 ENSPSNG00000016904 #29 LY6H (ENSPSNG00000016735) #32 LY6L (ENSPSNG00000016686) #33 ENSPSNG00000016622 ##31 ENSPSNG00000016261 #36 ENSPSNG00000016179 ENSPSNG00000016137 Vaquita MODERN SPECIES 12 PCTP (ENSPSNG00000012604) TMEM100 (ENSPSNG00000012566) SMIM36 (ENSPSNG00000012521) MMD (ENSPSNG00000012484) HLF (ENSPSNG00000012389) STXBP4 (ENSPSNG00000012300) ENSPSNG00000012227 ENSPSNG00000012124 GPS2 (ENSPSNG00000012090) ENSPSNG00000012037 ENSPSNG00000011980 CA10 (ENSPSNG00000011791) ENSPSNG00000011630 TMEM132E (ENSPSNG00000011353) ENSPSNG00000011280 ENSPSNG00000011250 #22 ENSPSNG00000011220 ZNF830 (ENSPSNG00000011195) LIG3 (ENSPSNG00000011102) RFFL (ENSPSNG00000010922) RAD51D (ENSPSNG00000010752) FNDC8 (ENSPSNG00000010677) NLE1 (ENSPSNG00000010570) UNC45B (ENSPSNG00000010204) ENSPSNG00000010100 ENSPSNG00000010053 SLFN14 (ENSPSNG00000009991) ENSPSNG00000009938 ENSPSNG00000009891 ENSPSNG00000009744 ENSPSNG00000009692 Monodontidae ANCESTRAL SPECIES 20 ENSGT00390000013463 ENSGT00520000055666.a ENSGT01050000244890.a.a.a ENSGT00940000162035 ENSGT00940000159045 ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT01000000219817 ENSGT00940000154427.B #17 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493.h #29 ENSGT00940000163360 #30 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00940000153378.b.b.e ##31 ENSGT01010000229872 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 57 ENSDLEG00000017878 SPATC1 (ENSDLEG00000017845) GRINA (ENSDLEG00000017826) PARP10 (ENSDLEG00000017804) PLEC (ENSDLEG00000017581) NRBP2 (ENSDLEG00000017355) PUF60 (ENSDLEG00000017072) SCRIB (ENSDLEG00000016937) FAM83H (ENSDLEG00000016906) #15 MAPK15 (ENSDLEG00000016899) #16 ENSDLEG00000016882 ENSDLEG00000016874 #17 ZNF623 (ENSDLEG00000016864) TSTA3 (ENSDLEG00000016824) #19 PYCR3 (ENSDLEG00000016779) #20 ENSDLEG00000016758 #22 NAPRT (ENSDLEG00000016747) #23 MROH6 (ENSDLEG00000016708) #24 GSDMD (ENSDLEG00000016690) #25 ZC3H3 (ENSDLEG00000016668) #26 MAFA (ENSDLEG00000016663) RHPN1 (ENSDLEG00000016611) #27 ENSDLEG00000016547 #28 ZNF696 (ENSDLEG00000016538) #29 GLI4 (ENSDLEG00000016531) #30 ZFP41 (ENSDLEG00000016522) GPIHBP1 (ENSDLEG00000016516) #31 LY6H (ENSDLEG00000016496) #32 ENSDLEG00000016494 ENSDLEG00000016483 ENSDLEG00000016457 Beluga whale MODERN SPECIES 117 FGF11 (ENSDLEG00000018046) ENSDLEG00000018053 TMEM132E (ENSDLEG00000018074) ENSDLEG00000018084 #22 ENSDLEG00000018092 ZNF830 (ENSDLEG00000018101) LIG3 (ENSDLEG00000018120) RFFL (ENSDLEG00000018150) RAD51D (ENSDLEG00000018178) FNDC8 (ENSDLEG00000018193) NLE1 (ENSDLEG00000018206) UNC45B (ENSDLEG00000018224) ENSDLEG00000018247 ENSDLEG00000018271 SLFN14 (ENSDLEG00000018343) Narwhal DUPLICATION Narwhal MODERN SPECIES 312 EXOSC4 (ENSMMNG00015016563) OPLAH (ENSMMNG00015016609) SPATC1 (ENSMMNG00015016664) GRINA (ENSMMNG00015016735) PARP10 (ENSMMNG00015016783) PLEC (ENSMMNG00015017179) NRBP2 (ENSMMNG00015017941) PUF60 (ENSMMNG00015018029) SCRIB (ENSMMNG00015018262) FAM83H (ENSMMNG00015018421) #15 ENSMMNG00015018542 ENSMMNG00015018573 #17 ZNF623 (ENSMMNG00015018590) GFUS (ENSMMNG00015018603) #19 PYCR3 (ENSMMNG00015018632) #20 ENSMMNG00015018670 #22 NAPRT (ENSMMNG00015018776) #23 GSDMD (ENSMMNG00015018910) #25 ZC3H3 (ENSMMNG00015018947) #26 MAFA (ENSMMNG00015018973) RHPN1 (ENSMMNG00015019036) #27 TOP1MT (ENSMMNG00015019307) #28 ZNF696 (ENSMMNG00015019335) #29 GLI4 (ENSMMNG00015019354) #30 ZFP41 (ENSMMNG00015019395) GPIHBP1 (ENSMMNG00015019411) #31 LY6H (ENSMMNG00015019439) #32 LY6L (ENSMMNG00015019466) #33 ENSMMNG00015019496 ##31 ENSMMNG00015019526 ENSMMNG00015019547 Narwhal MODERN SPECIES 316 C17orf75 (ENSMMNG00015020915) ZNF207 (ENSMMNG00015021000) PSMD11 (ENSMMNG00015021150) CDK5R1 (ENSMMNG00015021171) MYO1D (ENSMMNG00015021191) TMEM98 (ENSMMNG00015021221) SPACA3 (ENSMMNG00015021243) ASIC2 (ENSMMNG00015021265) CCL2 (ENSMMNG00015021287) ENSMMNG00015021298 CCL11 (ENSMMNG00015021303) CCL8 (ENSMMNG00015021312) ENSMMNG00015021318 CCL1 (ENSMMNG00015021332) TMEM132E (ENSMMNG00015021348) ENSMMNG00015021366 #22 ENSMMNG00015015650 ZNF830 (ENSMMNG00015015663) LIG3 (ENSMMNG00015015691) RFFL (ENSMMNG00015015776) RAD51D (ENSMMNG00015015851) FNDC8 (ENSMMNG00015015917) NLE1 (ENSMMNG00015015965) UNC45B (ENSMMNG00015016104) ENSMMNG00015016251 ENSMMNG00015016293 SLFN14 (ENSMMNG00015016335) PEX12 (ENSMMNG00015016360) Eulipotyphla ANCESTRAL SPECIES 126 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 Hedgehog MODERN SPECIES 799 PYCR3 (ENSEEUG00000013518) #20 EEF1D (ENSEEUG00000013475) #22 ENSEEUG00000013423 #23 ENSEEUG00000013392 #24 ENSEEUG00000013331 #25 Common shrew MODERN SPECIES 3394 EEF1D (ENSSARG00000011522) #22 NAPRT (ENSSARG00000011469) #23 Atlantogenata ANCESTRAL SPECIES 64 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000166965 ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00940000153837.a.a #27 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000154560.a #33 ENSGT00730000111801 ENSGT00940000161506 ENSGT00730000111571 ENSGT00940000164325 ENSGT00940000162197 ENSGT00390000003914 ENSGT00940000163743 Afrotheria ANCESTRAL SPECIES 100 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000166965 ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000154427.B #17 ENSGT00940000164153 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000153837.a.a #27 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00730000111801 ENSGT00940000161506 ENSGT00730000111571 ENSGT00940000164325 ENSGT00940000162197 ENSGT00390000003914 Afrotheria_a ANCESTRAL SPECIES 112 ENSGT00940000162035 ENSGT00940000159045 ENSGT00680000100508 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000166965 ENSGT00390000010763 ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000153837.a.a #27 ENSGT00940000163360 #30 ENSGT00940000153378.a.a #31 ENSGT00940000154560.b #32 ENSGT00940000153378.b.b ##31 ENSGT00940000154560.a #33 ENSGT00730000111801 ENSGT00940000161506 ENSGT00730000111571 ENSGT00940000164325 ENSGT00940000162197 ENSGT00390000003914 Elephant MODERN SPECIES 103 ENSLAFG00000008121 ENSLAFG00000027777 PARP10 (ENSLAFG00000004191) PLEC (ENSLAFG00000003018) ENSLAFG00000029313 ENSLAFG00000022558 ENSLAFG00000029902 PUF60 (ENSLAFG00000022929) ENSLAFG00000026079 IQANK1 (ENSLAFG00000030845) FAM83H (ENSLAFG00000029225) #15 ZNF623 (ENSLAFG00000006378) GFUS (ENSLAFG00000010684) #19 PYCR3 (ENSLAFG00000010682) #20 TIGD5 (ENSLAFG00000010678) EEF1D (ENSLAFG00000029200) #22 ENSLAFG00000023375 #23 MROH6 (ENSLAFG00000029963) #24 GSDMD (ENSLAFG00000002725) #25 ENSLAFG00000027000 #27 GLI4 (ENSLAFG00000022926) #30 ENSLAFG00000026142 #31 LY6H (ENSLAFG00000007979) #32 ENSLAFG00000025851 LY6E (ENSLAFG00000012727) ##31 ENSLAFG00000025775 #33 ENSLAFG00000032594 ENSLAFG00000032176 LYNX1 (ENSLAFG00000005492) SLURP2 (ENSLAFG00000026637) LYPD2 (ENSLAFG00000000353) Hyrax MODERN SPECIES 8101 GFUS (ENSPCAG00000005833) #19 PYCR3 (ENSPCAG00000005745) #20 TIGD5 (ENSPCAG00000005650) EEF1D (ENSPCAG00000005528) #22 Xenarthra ANCESTRAL SPECIES 909 ENSGT00940000163183 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000162472 #24 Armadillo MODERN SPECIES 4339 ZNF623 (ENSDNOG00000016322) GFUS (ENSDNOG00000035627) #19 PYCR3 (ENSDNOG00000024889) #20 ENSDNOG00000035421 EEF1D (ENSDNOG00000046639) #22 ENSDNOG00000049154 #24 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000155265.a ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B.g.b.b ENSGT01030000234531.B.g.b.a.a ENSGT01030000234531.B.g.a ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00940000161820 ENSGT00530000063723.b.g.a ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.r ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT00950000182890.D.c.b.a.b.a.a.a.b ENSGT00940000162000.d.a.a.b.b ENSGT00950000182890.D.c.a.b.b ENSGT00940000153378.a.a #31 ENSGT00940000154560 #32 ENSGT00730000111801 Opossum MODERN SPECIES 2 ENSMODG00000011094 ENSMODG00000027311 LRRC24 (ENSMODG00000011100) C8orf82 (ENSMODG00000044591) ARHGAP39 (ENSMODG00000011119) ENSMODG00000040096 ENSMODG00000011130 ENSMODG00000024086 ENSMODG00000042574 ENSMODG00000011150 ENSMODG00000011184 ENSMODG00000011178 ENSMODG00000025630 GFUS (ENSMODG00000011191) #19 TIGD5 (ENSMODG00000011207) EEF1D (ENSMODG00000011225) #22 NAPRT (ENSMODG00000011244) #23 MROH6 (ENSMODG00000011279) #24 ENSMODG00000011297 #25 ENSMODG00000011300 ENSMODG00000011385 #26 MAFA (ENSMODG00000011396) RHPN1 (ENSMODG00000011421) #27 TOP1MT (ENSMODG00000029734) #28 ENSMODG00000046698 ENSMODG00000005872 ENSMODG00000038431 ENSMODG00000040154 GLI4 (ENSMODG00000011659) #30 ENSMODG00000038683 ENSMODG00000042725 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00940000155265.a.d ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B.g.b.b ENSGT01030000234531.B.g.b.a.a ENSGT01030000234531.B.g.a ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00940000161820 ENSGT00530000063723.b.g.a ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.r ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163493 #29 ENSGT00940000163360 #30 ENSGT00950000182890.D.c.b.a.b.a.a.a.b ENSGT00940000162000.d.a.a.b.b ENSGT00950000182890.D.c.a.b.b ENSGT00940000153378.a.a #31 ENSGT00970000195823 ENSGT00730000111801 Diprotodontia DUPLICATION Diprotodontia ANCESTRAL SPECIES 51 ENSGT00940000154090.a ENSGT00940000155265.a.d ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B.g.b.b ENSGT01030000234531.B.g.b.a.a ENSGT01030000234531.B.g.a ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00530000063723.b.g.a ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.r ENSGT00950000183014.f.b.a.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT00950000182890.D.c.b.a.b.a.a.a.b ENSGT00940000162000.d.a.a.b.b ENSGT00950000182890.D.c.a.b.b ENSGT00940000153378.a.a #31 ENSGT00970000195823 ENSGT00730000111801 ENSGT00940000161506 Wallaby MODERN SPECIES 1376 TIGD5 (ENSMEUG00000008994) EEF1D (ENSMEUG00000008966) #22 Diprotodontia_a ANCESTRAL SPECIES 48 ENSGT00940000154090.a ENSGT00940000155265.a.d ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B.g.b.b ENSGT01030000234531.B.g.b.a.a ENSGT01030000234531.B.g.a ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00530000063723.b.g.a ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.r ENSGT00950000183014.f.b.a.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000163360 #30 ENSGT00950000182890.D.c.b.a.b.a.a.a.b ENSGT00940000162000.d.a.a.b.b ENSGT00950000182890.D.c.a.a.b.a.a.a.a ENSGT00940000153378.a.a #31 ENSGT00970000195823 ENSGT00730000111801 ENSGT00940000161506 koala MODERN SPECIES 56 RERG (ENSPCIG00000031756) PTPRO (ENSPCIG00000020562) EPS8 (ENSPCIG00000020544) ENSPCIG00000020542 DERA (ENSPCIG00000020538) SLC15A5 (ENSPCIG00000036941) MGST1 (ENSPCIG00000020534) LMO3 (ENSPCIG00000020527) ENSPCIG00000002375 ENSPCIG00000002366 ENSPCIG00000002360 ENSPCIG00000002352 ENSPCIG00000024937 PLCZ1 (ENSPCIG00000021230) CAPZA3 (ENSPCIG00000021232) ENSPCIG00000021235 #22 PLEKHA5 (ENSPCIG00000013167) AEBP2 (ENSPCIG00000021259) PDE3A (ENSPCIG00000016398) SLCO1C1 (ENSPCIG00000016395) ENSPCIG00000009735 SLCO1A2 (ENSPCIG00000007799) IAPP (ENSPCIG00000007795) PYROXD1 (ENSPCIG00000022456) RECQL (ENSPCIG00000022452) GOLT1B (ENSPCIG00000022450) ENSPCIG00000022447 GYS2 (ENSPCIG00000022444) ENSPCIG00000022443 KCNJ8 (ENSPCIG00000022441) ENSPCIG00000033240 Common wonbat MODERN SPECIES 915 ENSVURG00010002692 ENSVURG00010002676 ENSVURG00010002665 LRRC24 (ENSVURG00010002651) C8orf82 (ENSVURG00010002643) ARHGAP39 (ENSVURG00010002627) ENSVURG00010002611 ENSVURG00010002062 ENSVURG00010001999 ENSVURG00010001904 GFUS (ENSVURG00010001879) #19 PYCR3 (ENSVURG00010001867) #20 TIGD5 (ENSVURG00010001855) EEF1D (ENSVURG00010001823) #22 NAPRT (ENSVURG00010001802) #23 MROH6 (ENSVURG00010001777) #24 ENSVURG00010001767 #26 MAFA (ENSVURG00010001744) RHPN1 (ENSVURG00010001715) #27 ENSVURG00010001690 #28 ENSVURG00010001681 ENSVURG00010001678 #30 ENSVURG00010001673 ENSVURG00010001663 ENSVURG00010001652 ENSVURG00010001628 ENSVURG00010001617 ENSVURG00010001606 ENSVURG00010001597 Diprotodontia ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.b #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a.b #22 koala MODERN SPECIES 58 C8orf82 (ENSPCIG00000008974) ARHGAP39 (ENSPCIG00000008973) ENSPCIG00000008972 ENSPCIG00000008970 ENSPCIG00000008968 ENSPCIG00000008967 ENSPCIG00000008909 ENSPCIG00000031678 ENSPCIG00000008965 ENSPCIG00000008964 ENSPCIG00000008963 ENSPCIG00000008893 GFUS (ENSPCIG00000008863) #19 ENSPCIG00000008861 #20 TIGD5 (ENSPCIG00000037167) ENSPCIG00000008858 #22 NAPRT (ENSPCIG00000008856) #23 MROH6 (ENSPCIG00000008853) #24 ENSPCIG00000032342 #25 MAFA (ENSPCIG00000004385) RHPN1 (ENSPCIG00000009797) #27 TOP1MT (ENSPCIG00000002023) #28 GLI4 (ENSPCIG00000026539) #30 ENSPCIG00000023850 ENSPCIG00000023842 ENSPCIG00000035009 ENSPCIG00000023844 ENSPCIG00000023839 ENSPCIG00000023835 #31 ENSPCIG00000035501 ENSPCIG00000023584 Tasmanian devil MODERN SPECIES ENSSHAG00000011627 ENSSHAG00000003757 ENSSHAG00000004558 ENSSHAG00000027848 ENSSHAG00000022034 ENSSHAG00000005618 ENSSHAG00000006529 ENSSHAG00000023595 ENSSHAG00000023024 ENSSHAG00000003503 ENSSHAG00000004074 ENSSHAG00000004776 ENSSHAG00000031264 #19 TIGD5 (ENSSHAG00000007559) PYCR3 (ENSSHAG00000027954) #20 EEF1D (ENSSHAG00000007688) #22 NAPRT (ENSSHAG00000024279) #23 ENSSHAG00000008292 #24 ENSSHAG00000008453 #25 ENSSHAG00000022962 ENSSHAG00000027837 ENSSHAG00000025210 #26 MAFA (ENSSHAG00000029071) RHPN1 (ENSSHAG00000012923) #27 ENSSHAG00000013481 #28 ENSSHAG00000025262 #29 ENSSHAG00000024758 GLI4 (ENSSHAG00000030186) #30 ENSSHAG00000001248 ENSSHAG00000031440 ENSSHAG00000003090 Platypus MODERN SPECIES 15 ENSOANG00000050713 ENSOANG00000047838 PPP1R16A (ENSOANG00000003521) GPT (ENSOANG00000003523) MFSD3 (ENSOANG00000046414) ENSOANG00000046195 ENSOANG00000003526 LRRC14 (ENSOANG00000044257) ENSOANG00000041596 C8orf82 (ENSOANG00000037775) ARHGAP39 (ENSOANG00000003527) GFUS (ENSOANG00000003528) #19 ENSOANG00000003530 #20 TIGD5 (ENSOANG00000042341) ENSOANG00000046564 ENSOANG00000003533 #22 NAPRT (ENSOANG00000037934) #23 MROH6 (ENSOANG00000037058) #24 ENSOANG00000044733 ##25 ZC3H3 (ENSOANG00000003534) #26 MAFA (ENSOANG00000044636) RHPN1 (ENSOANG00000003536) #27 ENSOANG00000009984 #28 ENSOANG00000008611 ENSOANG00000045638 LYNX1 (ENSOANG00000008610) ZFAT (ENSOANG00000010056) ST3GAL1 (ENSOANG00000042796) NDRG1 (ENSOANG00000010060) CCN4 (ENSOANG00000010062) SLA (ENSOANG00000010066) Sauria ANCESTRAL SPECIES ENSGT00940000154022.a.b ENSGT00940000159537 ENSGT00940000154090.a ENSGT00940000155265.a ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00950000185775 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a #31 ENSGT00940000153378.a.b ##31 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000154022.a.b ENSGT00940000159537 ENSGT00940000154090.a ENSGT00940000155265.a ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a #31 Cryptodira ANCESTRAL SPECIES 22 ENSGT00940000159537 ENSGT00940000154090.a ENSGT00940000155265.a ENSGT01060000248575.A ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378.b.b ##31 ENSGT01030000239707 ENSGT00390000003914 ENSGT00940000157432.C ENSGT01000000214440.A.a.a ENSGT00940000159581 ENSGT00940000166193 ENSGT01040000240444.B Testudinoidea ANCESTRAL SPECIES 16 ENSGT00940000159537.f ENSGT00940000159537.e ENSGT00940000154090.a ENSGT00940000155265.a ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.h ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378.b.b ##31 ENSGT00940000153378.b.a.a.a.a ##31 ENSGT00940000153378.b.a.a.a.b ##31 ENSGT00940000153378.b.a.b.a.a ##31 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a #31 ENSGT00940000153378.a.b ##31 Testudinidae ANCESTRAL SPECIES 45 ENSGT00940000154022.a.b ENSGT00940000159537.f ENSGT00940000159537.e ENSGT00940000154090.a ENSGT00940000155265.a ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.h ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378.b.b ##31 ENSGT00940000153378.b.a.a.a.a ##31 ENSGT00940000153378.b.a.a.a.b ##31 ENSGT00940000153378.b.a.b.a.a ##31 Abingdon island giant tortoise MODERN SPECIES 823 GFUS (ENSCABG00000019785) #19 PYCR3 (ENSCABG00000019783) #20 TIGD5 (ENSCABG00000019782) EEF1D (ENSCABG00000019781) #22 NAPRT (ENSCABG00000019775) #23 Goode s thornscrub tortoise MODERN SPECIES 11 KIFC2 (ENSGEVG00005019356) ENSGEVG00005019348 ENSGEVG00005019338 PPP1R16A (ENSGEVG00005019326) GPT (ENSGEVG00005019314) MFSD3 (ENSGEVG00005019303) RECQL4 (ENSGEVG00005019285) LRRC14 (ENSGEVG00005019270) ENSGEVG00005019263 LRRC24 (ENSGEVG00005019249) C8orf82 (ENSGEVG00005019238) ARHGAP39 (ENSGEVG00005019191) GFUS (ENSGEVG00005019146) #19 PYCR3 (ENSGEVG00005019128) #20 TIGD5 (ENSGEVG00005019113) EEF1D (ENSGEVG00005019094) #22 NAPRT (ENSGEVG00005019069) #23 ENSGEVG00005019059 ENSGEVG00005019050 ENSGEVG00005019040 ENSGEVG00005019013 ENSGEVG00005018988 ENSGEVG00005018978 ENSGEVG00005018964 ENSGEVG00005018956 ENSGEVG00005018943 ENSGEVG00005018925 ENSGEVG00005018822 ENSGEVG00005018795 ENSGEVG00005018769 ENSGEVG00005018693 Emydidae ANCESTRAL SPECIES 15 ENSGT00940000159537.e ENSGT00940000154090.a ENSGT00940000155265.a ENSGT01060000248575.A ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i.h ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00940000153378.b.b ##31 ENSGT00940000153378.b.a.a.a.a ##31 ENSGT00940000153378.b.a.a.a.b ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b.a.a ##31 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a #31 Three-toed box turtle MODERN SPECIES 24 ENSTMTG00000001611 TMEM276 (ENSTMTG00000001606) ENSTMTG00000001598 PPP1R16A (ENSTMTG00000001566) MFSD3 (ENSTMTG00000001545) RECQL4 (ENSTMTG00000001438) LRRC14 (ENSTMTG00000001409) ENSTMTG00000001405 ENSTMTG00000001399 LRRC24 (ENSTMTG00000001387) C8orf82 (ENSTMTG00000001379) GFUS (ENSTMTG00000001371) #19 PYCR3 (ENSTMTG00000001365) #20 TIGD5 (ENSTMTG00000001355) ENSTMTG00000001352 EEF1D (ENSTMTG00000001328) #22 NAPRT (ENSTMTG00000001299) #23 ENSTMTG00000001278 ENSTMTG00000001251 MAFA (ENSTMTG00000001241) RHPN1 (ENSTMTG00000001230) #27 TOP1MT (ENSTMTG00000000638) #28 ENSTMTG00000000377 ##31 ENSTMTG00000000346 ##31 LYPD2 (ENSTMTG00000000322) THEM6 (ENSTMTG00000000308) ENSTMTG00000000295 #31 ENSTMTG00000000282 ENSTMTG00000000262 ARC (ENSTMTG00000000252) ADGRB1 (ENSTMTG00000000135) painted turtle MODERN SPECIES 2424 FOXH1 (ENSCPBG00000018987) PPP1R16A (ENSCPBG00000018991) GPT (ENSCPBG00000018994) ENSCPBG00000018999 ENSCPBG00000019000 MFSD3 (ENSCPBG00000019001) RECQL4 (ENSCPBG00000019003) LRRC14 (ENSCPBG00000019005) ENSCPBG00000019006 LRRC24 (ENSCPBG00000019007) C8orf82 (ENSCPBG00000019008) ARHGAP39 (ENSCPBG00000019013) GFUS (ENSCPBG00000019026) #19 PYCR3 (ENSCPBG00000019032) #20 TIGD5 (ENSCPBG00000019033) EEF1D (ENSCPBG00000019036) #22 NAPRT (ENSCPBG00000019039) #23 ENSCPBG00000019040 ENSCPBG00000019041 ENSCPBG00000019042 ENSCPBG00000019043 ENSCPBG00000019046 ZC3H3 (ENSCPBG00000019050) #26 MAFA (ENSCPBG00000019053) RHPN1 (ENSCPBG00000019054) #27 TOP1MT (ENSCPBG00000019059) #28 ENSCPBG00000019061 ##31 ENSCPBG00000019064 ##31 ENSCPBG00000019065 ##31 ENSCPBG00000019067 ##31 ENSCPBG00000019069 Chinese turtle MODERN SPECIES 1731 ARHGAP39 (ENSPSIG00000010962) GFUS (ENSPSIG00000010337) #19 PYCR3 (ENSPSIG00000010031) #20 EEF1D (ENSPSIG00000009932) #22 NAPRT (ENSPSIG00000009341) #23 ENSPSIG00000009302 ENSPSIG00000008682 ENSPSIG00000008306 #24 ENSPSIG00000008267 ENSPSIG00000008180 ENSPSIG00000008128 #26 RHPN1 (ENSPSIG00000008011) #27 TOP1MT (ENSPSIG00000007822) #28 ENSPSIG00000007335 ##31 Archosauria ANCESTRAL SPECIES ENSGT00390000018422 ENSGT00940000161897 ENSGT00940000158421 ENSGT00940000160188 ENSGT00390000018258 ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT01030000235263 ENSGT01030000239707 Aves ANCESTRAL SPECIES 9 ENSGT00390000018422 ENSGT00940000161897 ENSGT00940000158421 ENSGT00940000160188 ENSGT00390000018258 ENSGT00940000154090.a ENSGT00940000155265.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Neognathae ANCESTRAL SPECIES ENSGT00950000183081.b ENSGT00940000161506 ENSGT00940000154491.c ENSGT00940000160188 ENSGT00390000018258 ENSGT00940000154090.a ENSGT00940000155265.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Galloanserae ANCESTRAL SPECIES ENSGT00390000003161 ENSGT00390000011521 ENSGT01030000234531.B ENSGT01030000234722.a.a.a.b.a.a.b.b ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Anatidae ANCESTRAL SPECIES 128 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 Pink-footed goose MODERN SPECIES 432 PYCR3 (ENSABRG00000016147) #20 TIGD5 (ENSABRG00000016145) EEF1D (ENSABRG00000016137) #22 NAPRT (ENSABRG00000016133) #23 ENSABRG00000016124 ENSABRG00000016112 ZC3H3 (ENSABRG00000016107) #26 Duck MODERN SPECIES 2299 ENSAPLG00000016463 EEF1D (ENSAPLG00000029719) #22 NAPRT (ENSAPLG00000008736) #23 ENSAPLG00000008882 ENSAPLG00000008916 ENSAPLG00000023200 ZC3H3 (ENSAPLG00000021603) #26 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000162855.a.b ENSGT00940000160430 ENSGT00940000155594 ENSGT00940000154025.a ENSGT00940000159342 #15 ENSGT00940000159758 #16 ENSGT00960000187265 ENSGT00390000003161 ENSGT00390000011521 ENSGT01030000234531.B ENSGT01030000234722.a.a.a.b.a.a.b.b ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000167819 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 ENSGT00390000003914 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000161574.h ENSGT00390000006896 ENSGT00390000016546 ENSGT00940000156930 ENSGT00390000018422 ENSGT00940000161897 ENSGT01070000256203 ENSGT01100000264214 ENSGT01030000234722.a.a.a.b.a.a.b.b.d ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000167819 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT01030000236209 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Turkey MODERN SPECIES 22 ENSMGAG00000020757 #31 ENSMGAG00000012990 ##31 ENSMGAG00000012991 ENSMGAG00000012993 ##31 ENSMGAG00000012992 ##31 ENSMGAG00000012994 #28 ENSMGAG00000020337 ENSMGAG00000013004 #27 ENSMGAG00000013012 ENSMGAG00000013013 ENSMGAG00000013024 ENSMGAG00000013016 GFUS (ENSMGAG00000013047) #19 PYCR3 (ENSMGAG00000013046) #20 TIGD5 (ENSMGAG00000013045) EEF1D (ENSMGAG00000013035) #22 NAPRT (ENSMGAG00000013029) #23 ENSMGAG00000021146 ADCY8 (ENSMGAG00000012773) ASAP1 (ENSMGAG00000012720) CYRIB (ENSMGAG00000012710) ENSMGAG00000018595 ENSMGAG00000015872 ENSMGAG00000020437 ENSMGAG00000012671 ENSMGAG00000015869 NDUFB9 (ENSMGAG00000012681) MTSS1 (ENSMGAG00000012682) ENSMGAG00000012696 ENSMGAG00000012691 NSMCE2 (ENSMGAG00000012705) Chicken MODERN SPECIES 11 ENSGALG00010009642 ENSGALG00010009639 ENSGALG00010009636 ENSGALG00010009632 ENSGALG00010008703 ENSGALG00010009628 ENSGALG00010009622 ENSGALG00010009613 ENSGALG00010008687 ENSGALG00010009598 ENSGALG00010009590 ENSGALG00010009584 TSTA3 (ENSGALG00010008658) #19 PYCR3 (ENSGALG00010008588) #20 TIGD5 (ENSGALG00010009582) EEF1D (ENSGALG00010008561) #22 ENSGALG00010008511 NAPRT (ENSGALG00010008410) #23 ENSGALG00010008391 ENSGALG00010008375 ZC3H3 (ENSGALG00010008360) MAFA (ENSGALG00010008355) RHPN1 (ENSGALG00010008086) #27 TOP1MT (ENSGALG00010008081) #28 ENSGALG00010008053 ENSGALG00010008048 ##31 LY6CLEL (ENSGALG00010008037) LY6E (ENSGALG00010008029) ##31 ENSGALG00010007947 #31 ENSGALG00010007958 PSCA (ENSGALG00010007954) ##31 Japanese quail MODERN SPECIES 11 ENSCJPG00005011453 ENSCJPG00005011451 PUF60 (ENSCJPG00005011450) SCRIB (ENSCJPG00005010729) FAM83H (ENSCJPG00005010727) #15 MAPK15 (ENSCJPG00005010726) #16 ENSCJPG00005010725 ARHGAP39 (ENSCJPG00005010721) ENSCJPG00005010720 ENSCJPG00005010719 RECQL4 (ENSCJPG00005010718) ENSCJPG00005010717 GFUS (ENSCJPG00005010716) #19 PYCR3 (ENSCJPG00005010715) #20 TIGD5 (ENSCJPG00005010714) EEF1D (ENSCJPG00005010693) #22 NAPRT (ENSCJPG00005010692) #23 ENSCJPG00005010691 ENSCJPG00005010690 ENSCJPG00005010689 MAFA (ENSCJPG00005010688) RHPN1 (ENSCJPG00005010686) #27 TOP1MT (ENSCJPG00005010481) #28 ENSCJPG00005010480 ENSCJPG00005010479 ##31 ENSCJPG00005010478 ##31 ENSCJPG00005010477 ##31 ENSCJPG00005010476 #31 ENSCJPG00005010475 PSCA (ENSCJPG00005010474) ##31 ARC (ENSCJPG00005010469) Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000161506 ENSGT00940000154491.c ENSGT00940000160188 ENSGT00390000018258 ENSGT00940000154090.a ENSGT00940000155265.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000011521 ENSGT00390000003161 ENSGT01030000234722.a.a.a.b.a.a.b ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Passeriformes ANCESTRAL SPECIES ENSGT00390000016546 ENSGT00940000156930 ENSGT00390000018422 ENSGT00940000161897 ENSGT00940000158421 ENSGT00940000160188 ENSGT00390000018258 ENSGT01030000234531.B.j ENSGT00390000003161 ENSGT01030000234722.a.a.a.b.a.a.b ENSGT00390000004681 #19 ENSGT00960000189649 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Great tit MODERN SPECIES 11 NRBP2 (ENSPMJG00000013494) PUF60 (ENSPMJG00000013484) ENSPMJG00000013482 SCRIB (ENSPMJG00000013231) FAM83H (ENSPMJG00000013224) #15 MAPK15 (ENSPMJG00000013222) #16 THUMPD2 (ENSPMJG00000013221) ENSPMJG00000013220 LRRC14 (ENSPMJG00000013219) ARHGAP39 (ENSPMJG00000013217) GFUS (ENSPMJG00000013202) #19 ENSPMJG00000013201 PYCR3 (ENSPMJG00000013200) #20 TIGD5 (ENSPMJG00000013199) ENSPMJG00000013198 EEF1D (ENSPMJG00000013197) #22 NAPRT (ENSPMJG00000013196) #23 ENSPMJG00000013195 ENSPMJG00000013193 ZC3H3 (ENSPMJG00000013191) #26 MAFA (ENSPMJG00000013187) RHPN1 (ENSPMJG00000013183) #27 TOP1MT (ENSPMJG00000013178) #28 ENSPMJG00000013177 ##31 ENSPMJG00000013175 ##31 ENSPMJG00000013172 ##31 ENSPMJG00000013171 ##31 ENSPMJG00000013169 #31 ENSPMJG00000013167 PSCA (ENSPMJG00000013164) ##31 ARC (ENSPMJG00000013161) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000158421 ENSGT00940000160188 ENSGT00390000018258 ENSGT00940000155265.b ENSGT00940000160387 ENSGT01030000234531.B.i ENSGT00390000011521 ENSGT01030000234531.B.j ENSGT00390000003161 ENSGT01030000234722.a.a.a.b.a.a.b.e.a ENSGT00390000004681 #19 ENSGT00960000189649 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000185775 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Passeriformes_g ANCESTRAL SPECIES 3 ENSGT01050000244890.a.a.a ENSGT01030000234601.c.a.a.f.a.b ENSGT00940000161574 ENSGT00390000006896 ENSGT00390000016546 ENSGT00940000156930 ENSGT00390000018422 ENSGT00940000158421 ENSGT00940000160188 ENSGT00390000018258 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00960000189649 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT00940000153378.a.a #31 ENSGT01030000235263 Passeroidea ANCESTRAL SPECIES 2 ENSGT01050000244890.a.a.a ENSGT01030000234601.c.a.a.f.a.b ENSGT00940000161574 ENSGT00390000006896 ENSGT00390000016546 ENSGT00940000156930 ENSGT00390000018422 ENSGT00940000158421 ENSGT00940000160188 ENSGT00390000018258 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00960000189649 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT01030000235263 ENSGT00940000153378.a.b ##31 Zebra finch MODERN SPECIES 12 ENSTGUG00000023230 ENSTGUG00000025375 ENSTGUG00000026842 ENSTGUG00000027017 ENSTGUG00000024112 ENSTGUG00000027919 ENSTGUG00000012773 #20 TIGD5 (ENSTGUG00000012771) ENSTGUG00000012756 #23 ENSTGUG00000012755 ENSTGUG00000019767 GFUS (ENSTGUG00000012774) #19 ENSTGUG00000024214 ENSTGUG00000019855 #20 ENSTGUG00000020868 EEF1D (ENSTGUG00000012761) #22 ENSTGUG00000021883 #23 ENSTGUG00000023756 ENSTGUG00000018844 ZC3H3 (ENSTGUG00000012743) #26 MAFA (ENSTGUG00000012742) RHPN1 (ENSTGUG00000012739) #27 TOP1MT (ENSTGUG00000012734) #28 ENSTGUG00000018250 ENSTGUG00000012733 ##31 ENSTGUG00000012732 ##31 ENSTGUG00000028739 ENSTGUG00000022984 ##31 ENSTGUG00000021003 #31 ENSTGUG00000012729 PSCA (ENSTGUG00000012728) ##31 Common canary MODERN SPECIES ENSSCAG00000000002 PUF60 (ENSSCAG00000000012) ENSSCAG00000000013 ENSSCAG00000000015 SCRIB (ENSSCAG00000000022) FAM83H (ENSSCAG00000000027) #15 MAPK15 (ENSSCAG00000000028) #16 THUMPD2 (ENSSCAG00000000031) ARHGAP39 (ENSSCAG00000000048) ENSSCAG00000000055 GFUS (ENSSCAG00000000063) #19 ENSSCAG00000000069 PYCR3 (ENSSCAG00000000072) #20 TIGD5 (ENSSCAG00000000074) EEF1D (ENSSCAG00000000077) #22 NAPRT (ENSSCAG00000000080) #23 ENSSCAG00000000087 ENSSCAG00000000097 ZC3H3 (ENSSCAG00000000136) #26 MAFA (ENSSCAG00000000176) RHPN1 (ENSSCAG00000000223) #27 TOP1MT (ENSSCAG00000000248) #28 ENSSCAG00000000290 ENSSCAG00000000299 ##31 ENSSCAG00000000306 ##31 ENSSCAG00000000312 ##31 ENSSCAG00000000319 ##31 ENSSCAG00000000328 #31 ENSSCAG00000000333 ENSSCAG00000000346 ##31 Medium ground finch MODERN SPECIES 284 GFUS (ENSGFOG00000002616) #19 PYCR3 (ENSGFOG00000002609) #20 TIGD5 (ENSGFOG00000002595) EEF1D (ENSGFOG00000002569) #22 NAPRT (ENSGFOG00000002547) #23 ENSGFOG00000002520 ENSGFOG00000002470 ZC3H3 (ENSGFOG00000002229) #26 MAFA (ENSGFOG00000001992) RHPN1 (ENSGFOG00000013818) #27 TOP1MT (ENSGFOG00000013817) #28 ENSGFOG00000013813 ENSGFOG00000013812 ##31 ENSGFOG00000013811 ##31 ENSGFOG00000013809 ENSGFOG00000013804 ##31 ENSGFOG00000013802 ENSGFOG00000013799 ENSGFOG00000013797 Flycatcher MODERN SPECIES 11 ENSFALG00000023625 ENSFALG00000028254 ENSFALG00000015185 ENSFALG00000026993 ENSFALG00000024971 ENSFALG00000026254 ENSFALG00000023890 ENSFALG00000027569 ENSFALG00000027200 ENSFALG00000023237 TSTA3 (ENSFALG00000028622) #19 ENSFALG00000027346 ENSFALG00000025033 #20 TIGD5 (ENSFALG00000009491) ENSFALG00000024200 EEF1D (ENSFALG00000025604) #22 NAPRT (ENSFALG00000009484) #23 ENSFALG00000009514 ENSFALG00000009532 ZC3H3 (ENSFALG00000009538) #26 MAFA (ENSFALG00000015256) RHPN1 (ENSFALG00000009545) #27 TOP1MT (ENSFALG00000009559) #28 ENSFALG00000009574 ENSFALG00000009576 ##31 ENSFALG00000009581 ##31 ENSFALG00000027540 ##31 ENSFALG00000009599 #31 ENSFALG00000009604 PSCA (ENSFALG00000009610) ##31 ARC (ENSFALG00000015013) Neognathae_c ANCESTRAL SPECIES 1 ENSGT00390000004215.a.b.b.d ENSGT00950000183081.b ENSGT00940000161506 ENSGT00940000154491.c ENSGT00390000018258 ENSGT00940000154090.a ENSGT00940000155265.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000011521 ENSGT00390000003161 ENSGT01030000234722.a.a.a.b.a.a.b ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00950000185775 ENSGT00940000153456.a #23 ENSGT00940000164912 ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b.a ##31 ENSGT00940000153378.b.a.a.a ##31 ENSGT00940000153378.b.a.a.b.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT01030000235263 Kakapo MODERN SPECIES ENSSHBG00005001171 ENSSHBG00005001172 ENSSHBG00005001173 FOXH1 (ENSSHBG00005001174) PPP1R16A (ENSSHBG00005001175) ENSSHBG00005001176 RECQL4 (ENSSHBG00005001177) LRRC14 (ENSSHBG00005001178) C8orf82 (ENSSHBG00005001179) ARHGAP39 (ENSSHBG00005001180) ENSSHBG00005001181 ENSSHBG00005001182 GFUS (ENSSHBG00005001183) #19 PYCR3 (ENSSHBG00005001184) #20 TIGD5 (ENSSHBG00005001185) EEF1D (ENSSHBG00005001186) #22 ENSSHBG00005001187 NAPRT (ENSSHBG00005001188) #23 ENSSHBG00005001189 ZC3H3 (ENSSHBG00005001190) #26 MAFA (ENSSHBG00005001192) RHPN1 (ENSSHBG00005001193) #27 TOP1MT (ENSSHBG00005001194) #28 ENSSHBG00005001195 ENSSHBG00005001196 ##31 ENSSHBG00005001197 ##31 ENSSHBG00005001198 ENSSHBG00005001199 ##31 LYPD2 (ENSSHBG00005001200) ENSSHBG00005001201 ENSSHBG00005001202 Golden eagle MODERN SPECIES 20 ENSACCG00020003328 HGH1 (ENSACCG00020003350) MROH1 (ENSACCG00020003379) BOP1 (ENSACCG00020003484) SCX (ENSACCG00020003573) HSF1 (ENSACCG00020003618) ENSACCG00020003667 DGAT1 (ENSACCG00020003746) LRRC14 (ENSACCG00020003825) C8orf82 (ENSACCG00020003836) ARHGAP39 (ENSACCG00020003865) ENSACCG00020003909 GFUS (ENSACCG00020003924) #19 PYCR3 (ENSACCG00020003939) #20 TIGD5 (ENSACCG00020003945) EEF1D (ENSACCG00020003975) #22 NAPRT (ENSACCG00020004028) #23 ENSACCG00020004048 ENSACCG00020004069 ZC3H3 (ENSACCG00020004088) #26 MAFA (ENSACCG00020004098) RHPN1 (ENSACCG00020004108) #27 TOP1MT (ENSACCG00020004122) #28 ENSACCG00020004131 ENSACCG00020004135 ENSACCG00020004138 ##31 ENSACCG00020004145 ##31 ENSACCG00020004152 ##31 ENSACCG00020004161 ##31 LYPD2 (ENSACCG00020004168) ENSACCG00020004179 African ostrich MODERN SPECIES 526 GFUS (ENSSCUG00000003976) #19 EEF1D (ENSSCUG00000003982) #22 NAPRT (ENSSCUG00000003985) #23 ENSSCUG00000003986 ENSSCUG00000003988 ZC3H3 (ENSSCUG00000003993) #26 Australian saltwater crocodile MODERN SPECIES NRBP2 (ENSCPRG00005014086) PUF60 (ENSCPRG00005014081) SCRIB (ENSCPRG00005013928) IQANK1 (ENSCPRG00005013891) ENSCPRG00005013887 FAM83H (ENSCPRG00005013885) #15 MAPK15 (ENSCPRG00005013882) #16 GFUS (ENSCPRG00005013872) #19 PYCR3 (ENSCPRG00005013853) #20 TIGD5 (ENSCPRG00005013842) EEF1D (ENSCPRG00005013838) #22 NAPRT (ENSCPRG00005013828) #23 ENSCPRG00005013822 ENSCPRG00005013802 ZC3H3 (ENSCPRG00005013784) #26 RHPN1 (ENSCPRG00005013749) #27 TOP1MT (ENSCPRG00005013706) #28 ENSCPRG00005013701 ENSCPRG00005013699 ENSCPRG00005013689 ENSCPRG00005013687 ##31 ENSCPRG00005013686 ##31 LYPD2 (ENSCPRG00005013683) ENSCPRG00005013680 ENSCPRG00005013678 ARC (ENSCPRG00005013663) Lepidosauria ANCESTRAL SPECIES 2 ENSGT00940000159537.d ENSGT00940000154090.a ENSGT00940000155265.a ENSGT00940000154019.b ENSGT00940000160387 ENSGT01030000234531.B ENSGT00390000013269 ENSGT00960000193101 ENSGT00940000160141 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00950000185775 ENSGT00940000153456.a #23 ENSGT00940000153837.a.a #27 ENSGT00940000162943 #28 ENSGT00960000189320 ENSGT00940000153378.b.a.a.b ##31 ENSGT00940000153378.b.a.b ##31 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00940000153378.a.a #31 ENSGT00940000153378.a.b ##31 ENSGT00390000003914 ENSGT00940000157432.C ENSGT01030000234973 ENSGT01000000214440.A.a.a tuatara MODERN SPECIES 1282 EEF1D (ENSSPUG00000005820) #22 ENSSPUG00000005845 #23 MAFA (ENSSPUG00000005870) ENSSPUG00000005878 #26 ENSSPUG00000005888 #26 ENSSPUG00000005897 #26 ENSSPUG00000005908 ENSSPUG00000005930 ENSSPUG00000005994 RHPN1 (ENSSPUG00000006009) #27 ENSSPUG00000006078 #28 LY6E (ENSSPUG00000006104) ##31 ENSSPUG00000006118 ENSSPUG00000006125 LYPD2 (ENSSPUG00000006133) ARC (ENSSPUG00000006157) Episquamata ANCESTRAL SPECIES 1 ENSGT00390000003914 ENSGT00940000153378.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT00390000004859.i ENSGT00940000162197 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.b.a.a.b ##31 ENSGT00960000189320 ENSGT00940000162943 #28 ENSGT00940000153837.a.a #27 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00950000185775 ENSGT00940000153456.a #23 ENSGT00950000185241.a.b Laterata ANCESTRAL SPECIES 5 ENSGT00390000003914 ENSGT00940000153378.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT01030000235263 ENSGT00940000162197 ENSGT00940000153378.b.a.b ##31 ENSGT00940000153378.b.a.a.b ##31 ENSGT00960000189320 ENSGT00940000162943 #28 ENSGT00940000153837.a.a #27 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C.i ENSGT00950000183014.f.b.a.a #22 ENSGT00950000185775 ENSGT00940000153456.a #23 ENSGT00950000185241.a.b ENSGT00950000185241.a.a ENSGT00940000164676 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT01000000214440.A.b ENSGT00390000011521 ENSGT00940000160141 ENSGT00960000193101 ENSGT01030000234531.B ENSGT00940000160387 ENSGT00940000154019.b ENSGT00940000159821 Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 15 ENSPMRG00000005663 ENSPMRG00000005654 ##31 ENSPMRG00000005648 ENSPMRG00000005640 ENSPMRG00000005635 ##31 ENSPMRG00000005624 ENSPMRG00000005614 TOP1MT (ENSPMRG00000005607) #28 ENSPMRG00000005598 RHPN1 (ENSPMRG00000005578) #27 ENSPMRG00000005568 ARHGAP39 (ENSPMRG00000005554) GFUS (ENSPMRG00000005532) #19 PYCR3 (ENSPMRG00000005520) #20 TIGD5 (ENSPMRG00000005518) ENSPMRG00000005513 #22 ENSPMRG00000005506 NAPRT (ENSPMRG00000005477) #23 ENSPMRG00000005466 ENSPMRG00000005463 ENSPMRG00000005236 ZC3H3 (ENSPMRG00000005185) #26 MAFA (ENSPMRG00000005153) STX17 (ENSPMRG00000005131) TKTL2 (ENSPMRG00000005093) SNRNP48 (ENSPMRG00000005066) ENSPMRG00000005056 ENSPMRG00000005047 FUT11 (ENSPMRG00000005042) TRAF6 (ENSPMRG00000005038) ENPP4 (ENSPMRG00000005034) Common wall lizard MODERN SPECIES 10 GHRL (ENSPMRG00000005213) TATDN2 (ENSPMRG00000005231) IRAK2 (ENSPMRG00000005238) ENSPMRG00000005246 THUMPD3 (ENSPMRG00000005254) SRGAP3 (ENSPMRG00000005264) ENSPMRG00000005292 RAD18 (ENSPMRG00000005296) OXTR (ENSPMRG00000005313) ENSPMRG00000005319 SSUH2 (ENSPMRG00000005332) LMCD1 (ENSPMRG00000005344) ENSPMRG00000005354 ENSPMRG00000005362 ENSPMRG00000005371 ENSPMRG00000005378 #22 ENSPMRG00000005385 EDEM1 (ENSPMRG00000005413) ARL8B (ENSPMRG00000005530) BHLHE40 (ENSPMRG00000005541) ITPR1 (ENSPMRG00000006931) SUMF1 (ENSPMRG00000014573) ENSPMRG00000014584 ENSPMRG00000014589 ENSPMRG00000014598 LRRN1 (ENSPMRG00000014601) CRBN (ENSPMRG00000014605) TRNT1 (ENSPMRG00000014610) ENSPMRG00000014615 CNTN4 (ENSPMRG00000014619) CNTN6 (ENSPMRG00000014662) Common wall lizard MODERN SPECIES 6 BCAS3 (ENSPMRG00000016590) ENSPMRG00000016607 PPM1D (ENSPMRG00000016615) APPBP2 (ENSPMRG00000016620) CHCT1 (ENSPMRG00000016628) ENSPMRG00000016642 CA4 (ENSPMRG00000016672) ENSPMRG00000016677 ZNHIT3 (ENSPMRG00000016682) MYO19 (ENSPMRG00000016688) PIGW (ENSPMRG00000016699) GGNBP2 (ENSPMRG00000016703) DHRS11 (ENSPMRG00000016712) MRM1 (ENSPMRG00000016723) ENSPMRG00000016733 ENSPMRG00000016735 #22 LHX1 (ENSPMRG00000016741) AATF (ENSPMRG00000016751) ACACA (ENSPMRG00000017059) ENSPMRG00000018816 ENSPMRG00000018824 SYNRG (ENSPMRG00000018932) DDX52 (ENSPMRG00000019311) HNF1B (ENSPMRG00000019334) HEATR6 (ENSPMRG00000019382) DYNLL2 (ENSPMRG00000019399) ENSPMRG00000019406 SRSF1 (ENSPMRG00000019413) VEZF1 (ENSPMRG00000019428) CUEDC1 (ENSPMRG00000019437) MRPS23 (ENSPMRG00000019448) Argentine black and white tegu MODERN SPECIES 13 ENSSMRG00000008106 ENSSMRG00000008123 ENSSMRG00000008125 LYPD2 (ENSSMRG00000008128) ENSSMRG00000008134 ENSSMRG00000008140 ##31 ENSSMRG00000008144 ##31 ENSSMRG00000008147 TOP1MT (ENSSMRG00000008169) #28 RHPN1 (ENSSMRG00000008174) #27 ARHGAP39 (ENSSMRG00000008192) GFUS (ENSSMRG00000008205) #19 ENSSMRG00000008214 PYCR3 (ENSSMRG00000008217) #20 TIGD5 (ENSSMRG00000008218) EEF1D (ENSSMRG00000008219) #22 ENSSMRG00000008227 NAPRT (ENSSMRG00000008232) #23 ENSSMRG00000008235 ENSSMRG00000008236 ENSSMRG00000008237 ENSSMRG00000008239 ZC3H3 (ENSSMRG00000008249) #26 MAFA (ENSSMRG00000008255) STX17 (ENSSMRG00000008270) MAF1 (ENSSMRG00000008271) TMX3 (ENSSMRG00000008275) C8orf82 (ENSSMRG00000008278) LRRC24 (ENSSMRG00000008286) ENSSMRG00000008289 LRRC14 (ENSSMRG00000008291) Toxicofera ANCESTRAL SPECIES 8 ENSGT00390000003914 ENSGT00940000153378.a.b ##31 ENSGT00940000153378.a.a #31 ENSGT00390000004859.i ENSGT00940000162197 ENSGT00940000153378.b.a.b ##31 ENSGT00990000205443 ENSGT01010000227788 ENSGT00940000153378.b.a.a.b ##31 ENSGT00940000162943 #28 ENSGT00940000153837.a.a #27 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00950000185241.a.b ENSGT00390000011521 ENSGT00940000160141 ENSGT00960000193101 ENSGT01030000234531.B ENSGT00940000160387 ENSGT00940000154019.b ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000160042 Lizard MODERN SPECIES 1123 ENSACAG00000037273 ENSACAG00000001546 #27 ENSACAG00000001682 GFUS (ENSACAG00000001741) #19 ENSACAG00000028314 PYCR3 (ENSACAG00000001821) #20 EEF1D (ENSACAG00000001861) #22 NAPRT (ENSACAG00000001910) #23 ENSACAG00000043539 Elapidae ANCESTRAL SPECIES 32 ENSGT00940000157432.C ENSGT00390000003914 ENSGT01030000237813 ENSGT00390000004859.i ENSGT00390000004859.j ENSGT00940000162197 ENSGT00940000153378.b.a.b ##31 ENSGT00990000205443 ENSGT01010000227788 ENSGT00940000153378.b.a.a.b ##31 ENSGT00940000162943 #28 ENSGT00940000153837.a.a #27 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00950000185241.a.b.a ENSGT00550000075046 ENSGT00390000017728 ENSGT00390000011521 ENSGT00940000160141 ENSGT00960000193101 ENSGT01030000234531.B ENSGT00940000160387 ENSGT00940000154019.b ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000160042 ENSGT00390000018258 ENSGT00510000049727 Elapidae_a ANCESTRAL SPECIES 103 ENSGT00940000157432.C ENSGT00390000003914 ENSGT01030000237813 ENSGT00940000162197 ENSGT00390000004859.i ENSGT00390000004859.j ENSGT01030000235263 ENSGT00940000153378.b.a.b ##31 ENSGT00990000205443.a ENSGT01010000227788 ENSGT00940000153378.b.a.a.b ##31 ENSGT00940000153837.a.a #27 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00950000185241.a.b.a Acanthophiinae ANCESTRAL SPECIES 104 ENSGT01000000214440.A.a.a ENSGT00940000157432.C ENSGT00390000003914 ENSGT01030000237813 ENSGT00390000004859.i ENSGT00390000004859.j ENSGT00940000162197 ENSGT00940000153378.b.a.b ##31 ENSGT00990000205443.a ENSGT01010000227788 ENSGT00940000153378.b.a.a.b ##31 ENSGT00940000153837.a.a #27 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 Mainland tiger snake MODERN SPECIES 369 RHPN1 (ENSNSUG00000011223) #27 ARHGAP39 (ENSNSUG00000011077) GFUS (ENSNSUG00000011076) #19 PYCR3 (ENSNSUG00000011074) #20 EEF1D (ENSNSUG00000011073) #22 NAPRT (ENSNSUG00000011026) #23 Eastern brown snake MODERN SPECIES 81 ENSPTXG00000018595 THEM6 (ENSPTXG00000018596) ENSPTXG00000018597 LYPD2 (ENSPTXG00000018598) ENSPTXG00000018599 ##31 ENSPTXG00000018600 ENSPTXG00000018601 ENSPTXG00000018602 ##31 ENSPTXG00000018603 ENSPTXG00000018604 ENSPTXG00000018605 RHPN1 (ENSPTXG00000018606) #27 ARHGAP39 (ENSPTXG00000018607) GFUS (ENSPTXG00000018608) #19 PYCR3 (ENSPTXG00000018609) #20 EEF1D (ENSPTXG00000018610) #22 ENSPTXG00000018611 Blue-lipped sea krait MODERN SPECIES 2717 EEF1D (ENSLLTG00000014836) #22 Indian cobra MODERN SPECIES 2 ENSNNAG00000009146 ENSNNAG00000009217 ENSNNAG00000009300 ENSNNAG00000009325 ENSNNAG00000009349 ENSNNAG00000009404 ENSNNAG00000009449 ENSNNAG00000009518 ENSNNAG00000009534 ENSNNAG00000009554 TOP1MT (ENSNNAG00000009611) #28 RHPN1 (ENSNNAG00000010267) #27 ENSNNAG00000010290 GFUS (ENSNNAG00000010358) #19 PYCR3 (ENSNNAG00000011125) #20 EEF1D (ENSNNAG00000011186) #22 NAPRT (ENSNNAG00000011219) #23 ENSNNAG00000011315 ENSNNAG00000011328 ENSNNAG00000011339 ENSNNAG00000011369 STX17 (ENSNNAG00000011424) NAA20 (ENSNNAG00000011447) PIGM (ENSNNAG00000011464) C8orf82 (ENSNNAG00000011476) LRRC24 (ENSNNAG00000011495) ENSNNAG00000011540 LRRC14 (ENSNNAG00000011600) RECQL4 (ENSNNAG00000011625) MFSD3 (ENSNNAG00000011687) ADCK5 (ENSNNAG00000011725) Anura ANCESTRAL SPECIES 381 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00940000154420.C ENSGT00950000183014.f.b.a.a #22 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000015039 ENSLLEG00000015060 ENSLLEG00000015081 ENSLLEG00000015135 ENSLLEG00000015214 CYC1 (ENSLLEG00000015364) ENSLLEG00000016075 ENSLLEG00000016102 ENSLLEG00000016242 LRRC14 (ENSLLEG00000016332) ENSLLEG00000016363 ENSLLEG00000016416 ENSLLEG00000016744 ENSLLEG00000016772 ENSLLEG00000016832 #23 EEF1D (ENSLLEG00000016965) #22 ARHGAP39 (ENSLLEG00000017364) ENSLLEG00000017501 ENSLLEG00000017524 ENSLLEG00000017577 ENSLLEG00000017725 ENSLLEG00000017800 ENSLLEG00000017921 ENSLLEG00000017973 ENSLLEG00000018045 ENSLLEG00000018380 ENSLLEG00000018569 ENSLLEG00000018865 ENSLLEG00000018901 ENSLLEG00000018930 ENSLLEG00000019017 Frog MODERN SPECIES 6 ENSXETG00000004942 ENSXETG00000013559 ENSXETG00000046123 ENSXETG00000022706 XB5774338 [provisional] (ENSXETG00000026397) ENSXETG00000030873 ENSXETG00000004687 ENSXETG00000039808 ENSXETG00000042928 ENSXETG00000045776 a4gnt (ENSXETG00000031191) gpaa1 (ENSXETG00000004682) XB5759208 [provisional] (ENSXETG00000036514) pycr3 (ENSXETG00000040185) #20 tigd5 (ENSXETG00000037125) eef1d (ENSXETG00000004674) #22 naprt (ENSXETG00000037754) #23 XB22062350 [provisional:nat2] (ENSXETG00000039157) exosc4 (ENSXETG00000034963) XB5836481 [provisional:trim7] (ENSXETG00000042278) lrrc14 (ENSXETG00000004669) rbck1 (ENSXETG00000035318) cyc1 (ENSXETG00000036554) nxpe3l.6 (ENSXETG00000004663) ENSXETG00000030993 nxpe3l.2 (ENSXETG00000017103) adgre2 (ENSXETG00000040944) ENSXETG00000042265 ENSXETG00000044250 oplah (ENSXETG00000007139) gpt (ENSXETG00000007140) Coelacanth MODERN SPECIES 2847 GFUS (ENSLACG00000001109) #19 EEF1D (ENSLACG00000004419) #22 naprt (ENSLACG00000005367) #23 ENSLACG00000006249 JMJD4 (ENSLACG00000006626) Actinopterygii ANCESTRAL SPECIES 325 ENSGT00390000004859 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.a.a #22 ENSGT00940000153456.a #23 ENSGT00940000164676 ENSGT00940000153837.a.a #27 ENSGT00940000162747 ENSGT00940000161068 #26 Neopterygii ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Otophysi ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.a #22 Golden-line barbel MODERN SPECIES 1119 hlx1 (ENSSGRG00000027042) RHPN1 (ENSSGRG00000026992) #27 naprt (ENSSGRG00000026918) #23 C8orf82 (ENSSGRG00000026915) gfus.1 (ENSSGRG00000026821) #19 gfus.2 (ENSSGRG00000026819) #19 gfus.2 (ENSSGRG00000026817) #19 pycr3 (ENSSGRG00000026816) #20 ENSSGRG00000026815 ENSSGRG00000026814 #22 ENSSGRG00000026811 tbc1d7 (ENSSGRG00000026801) DSP (ENSSGRG00000026787) Reedfish MODERN SPECIES 14 ENSECRG00000011940 vmo1a (ENSECRG00000011919) ENSECRG00000011912 ENSECRG00000011903 ENSECRG00000011813 ENSECRG00000011649 ENSECRG00000011587 bmb (ENSECRG00000011552) gfus.1 (ENSECRG00000011523) #19 ARHGAP39 (ENSECRG00000011496) C8orf82 (ENSECRG00000011480) ENSECRG00000011469 THEM6 (ENSECRG00000011463) LRRC24 (ENSECRG00000011448) pycr3 (ENSECRG00000011427) #20 EEF1D (ENSECRG00000011405) #22 naprt (ENSECRG00000011369) #23 ENSECRG00000011348 ENSECRG00000011265 RHPN1 (ENSECRG00000011227) #27 ENSECRG00000011216 mafaa (ENSECRG00000011211) ZC3H3 (ENSECRG00000011208) #26 ENSECRG00000011195 ENSECRG00000011189 ENSECRG00000011186 ENSECRG00000011182 ENSECRG00000011179 ENSECRG00000011177 ENSECRG00000011173 ENSECRG00000011166 Elephant shark MODERN SPECIES 3147 ENSCMIG00000004875 #22 Gnathostomata ANCESTRAL SPECIES 33 ENSGT01030000235645 ENSGT00940000164282 ENSGT00940000158892 ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112 ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000159798 ENSGT00940000156062 ENSGT00390000003282.B ENSGT00390000017509 ENSGT00940000156027 Elephant shark MODERN SPECIES 1592 ninj1 (ENSCMIG00000011529) ENSCMIG00000011528 ENSCMIG00000011526 ENSCMIG00000011522 FAM120A (ENSCMIG00000011516) phf2 (ENSCMIG00000011459) barx1 (ENSCMIG00000011418) ptpdc1a (ENSCMIG00000011412) wnt7aa (ENSCMIG00000011404) FBLN2 (ENSCMIG00000011392) hdac11 (ENSCMIG00000011388) NUP210 (ENSCMIG00000011053) IQSEC1 (ENSCMIG00000010972) acad9 (ENSCMIG00000010969) ENSCMIG00000010964 EFCC1 (ENSCMIG00000010962) ##22 ENSCMIG00000010960 ENSCMIG00000010954 rab43 (ENSCMIG00000010951) zgc:77375 (ENSCMIG00000010950) isy1 (ENSCMIG00000010938) cnbpb (ENSCMIG00000010936) raf1b (ENSCMIG00000010901) mkrn2 (ENSCMIG00000010891) mkrn2os (ENSCMIG00000010887) tsen2 (ENSCMIG00000010886) PPARG (ENSCMIG00000010883) TIMP4 (ENSCMIG00000010881) syn2a (ENSCMIG00000010866) Euteleostomi ANCESTRAL SPECIES 9 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000159798 ENSGT00940000156062 ENSGT00390000000616 Actinopterygii ANCESTRAL SPECIES 14 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT01000000222140 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000159798 Neopterygii ANCESTRAL SPECIES 38 ENSGT00940000158892.b ENSGT00940000158219.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT01000000222140 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 Osteoglossocephalai ANCESTRAL SPECIES 816 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 Clupeocephala ANCESTRAL SPECIES 20 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000167517 ENSGT00940000159798 ENSGT00940000156062.m ENSGT00390000000616 Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000167517 ENSGT00940000159798 ENSGT00940000156062.m ENSGT00390000000616 Acanthomorphata ANCESTRAL SPECIES 42 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00950000182914.b ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000178268.a ENSGT00940000159482 ENSGT00940000178431 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00950000182914.b ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000178268.a ENSGT00940000159482 ENSGT00940000178431 Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000178268.a ENSGT00940000159482 ENSGT00940000178431 ENSGT00940000166776 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000178268.a ENSGT00940000159482 ENSGT00940000178431 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT01100000263491.a.b.a.a.a.a.b.q.b ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT00940000178431 ENSGT00940000166776 Cyprinodontiformes ANCESTRAL SPECIES 49 ENSGT01100000263491.a.b.a.a.a.a.b.q.b ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 Cyprinodontoidei ANCESTRAL SPECIES 63 ENSGT01100000263491.a.b.a.a.a.a.b.q.b ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000160913 ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000160100 ENSGT00590000083094.a.a.c.a ENSGT00940000153456.b.b ##23 ENSGT00390000004581 ENSGT00390000005294.b ENSGT00940000171293 ENSGT00940000165244.b ENSGT00940000156872.d ENSGT00940000156015 ENSGT00930000151052 Poecilia ANCESTRAL SPECIES 20 ENSGT00940000154543.d ENSGT00950000183116.b.a.a.b.a.b.m.b ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 NAME_6 ANCESTRAL SPECIES 256 ENSGT00940000154543.d ENSGT00950000183116.b.a.a.b.a.b.m.b.m ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 Amazon molly MODERN SPECIES 575 ENSPFOG00000024585 cbln10 (ENSPFOG00000022046) pdrg1 (ENSPFOG00000008782) ENSPFOG00000024065 ENSPFOG00000008819 cstf1 (ENSPFOG00000022221) ENSPFOG00000008826 phf2 (ENSPFOG00000008892) barx1 (ENSPFOG00000009171) ptpdc1a (ENSPFOG00000009199) wnt7aa (ENSPFOG00000009314) FBLN2 (ENSPFOG00000009361) hdac11 (ENSPFOG00000009746) IQSEC1 (ENSPFOG00000009877) acad9 (ENSPFOG00000010092) ENSPFOG00000023040 ##22 ENSPFOG00000010322 CFAP57 (ENSPFOG00000023430) ENSPFOG00000010350 CFAP57 (ENSPFOG00000010383) nuf2 (ENSPFOG00000010681) ap5b1 (ENSPFOG00000010820) zgc:112255 (ENSPFOG00000010853) NAME_4 ANCESTRAL SPECIES 277 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 Sheepshead minnow MODERN SPECIES 793 barx1 (ENSCVAG00000002335) ptpdc1a (ENSCVAG00000002362) wnt7aa (ENSCVAG00000002370) hdac11 (ENSCVAG00000002386) ENSCVAG00000002392 ENSCVAG00000002399 acad9 (ENSCVAG00000002430) EFCC1 (ENSCVAG00000002436) ##22 ENSCVAG00000002441 ENSCVAG00000002447 ENSCVAG00000002498 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Mangrove rivulus MODERN SPECIES 1193 EFCC1 (ENSKMAG00000005436) ##22 Oryzias ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Oryzias_b ANCESTRAL SPECIES 3 ENSGT00950000182981.a ENSGT00940000156915.f.b ENSGT00940000156308.d ENSGT00940000156047.a ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218 ENSGT00940000158148.d ENSGT00390000006806 ENSGT00940000160093.a ENSGT00550000074997 ENSGT00390000007458 ENSGT01100000263545.a.b.d.b ENSGT00940000157312 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00620000088018 ENSGT00390000014109 ENSGT00530000065109 ENSGT00510000048121 ENSGT00940000154089.a.c ENSGT00950000182835.c.d.c.a ENSGT00390000016233.e.a ENSGT00390000008947 ENSGT00940000158489.a.b ENSGT00950000183091.B.b ENSGT00940000156490.b.b ENSGT00390000005939.a.b.b ENSGT00940000165182.d ENSGT00940000155218.A.c ENSGT00940000156010.eb Javanese ricefish MODERN SPECIES 19 ENSOJAG00000016043 ENSOJAG00000016035 ENSOJAG00000016026 ahcy (ENSOJAG00000015814) IQSEC1 (ENSOJAG00000014151) hdac11 (ENSOJAG00000013868) FBLN2 (ENSOJAG00000013545) ptpdc1a (ENSOJAG00000013480) barx1 (ENSOJAG00000013469) phf2 (ENSOJAG00000013291) ENSOJAG00000013252 KCNQ2 (ENSOJAG00000011597) ddx27 (ENSOJAG00000011492) khk (ENSOJAG00000011383) pltp (ENSOJAG00000010526) EFCC1 (ENSOJAG00000010082) ##22 CFAP57 (ENSOJAG00000010057) isy1 (ENSOJAG00000010039) rpp14 (ENSOJAG00000010026) ENSOJAG00000009609 pfkfb4a (ENSOJAG00000003803) ARPC4 (ENSOJAG00000003075) tada3l (ENSOJAG00000003061) RBM38 (ENSOJAG00000003047) rae1 (ENSOJAG00000003015) bmp7a (ENSOJAG00000002999) ENSOJAG00000002991 ENSOJAG00000002977 ENSOJAG00000002961 LSM14B (ENSOJAG00000002952) ENSOJAG00000002896 Oryzias_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Chinese medaka MODERN SPECIES 655 phf2 (ENSOSIG00000018469) ENSOSIG00000018453 ENSOSIG00000018446 ddx27 (ENSOSIG00000018428) khk (ENSOSIG00000018418) pltp (ENSOSIG00000017587) acad9 (ENSOSIG00000017433) EFCC1 (ENSOSIG00000017427) ##22 isy1 (ENSOSIG00000017420) HTD2 (ENSOSIG00000017415) RPP14 (ENSOSIG00000017411) ENSOSIG00000016984 pfkfb4a (ENSOSIG00000016844) arpc4 (ENSOSIG00000016829) tada3l (ENSOSIG00000016827) RBM38 (ENSOSIG00000016826) rae1 (ENSOSIG00000016824) bmp7a (ENSOSIG00000016656) ENSOSIG00000016649 ENSOSIG00000016647 ENSOSIG00000016644 LSM14B (ENSOSIG00000016642) ENSOSIG00000016641 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Pomacentridae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312.c ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000157312.d ENSGT00940000163561 ENSGT00390000004199 ENSGT00390000012818 ENSGT00940000153675.a.a.b.b ENSGT00940000159654 ENSGT00390000006113 ENSGT00940000160929 ENSGT00940000158061.b ENSGT00950000182882.A.a.i.a ENSGT00940000159178 ENSGT00940000161154.a ENSGT00950000183042.b.b ENSGT00940000161921.e.a ENSGT00940000157562.q.a Amphiprion ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Orange clownfish MODERN SPECIES 20 ENSAPEG00000016393 pdrg1 (ENSAPEG00000016365) ENSAPEG00000016340 znf831 (ENSAPEG00000016329) cstf1 (ENSAPEG00000016307) CASS4 (ENSAPEG00000016252) FAM120A (ENSAPEG00000016171) phf2 (ENSAPEG00000016046) barx1 (ENSAPEG00000016016) ptpdc1a (ENSAPEG00000016000) wnt7aa (ENSAPEG00000015975) FBLN2 (ENSAPEG00000015938) hdac11 (ENSAPEG00000015895) IQSEC1 (ENSAPEG00000015756) acad9 (ENSAPEG00000015647) EFCC1 (ENSAPEG00000015632) ##22 nuf2 (ENSAPEG00000015556) snrpe (ENSAPEG00000015525) ENSAPEG00000015506 wnt4 (ENSAPEG00000015471) ENSAPEG00000015451 fbxo2 (ENSAPEG00000015443) card19 (ENSAPEG00000015426) ninj1 (ENSAPEG00000015402) ENSAPEG00000015353 itih3b.2 (ENSAPEG00000015325) ENSAPEG00000015303 ENSAPEG00000015198 CAMK1 (ENSAPEG00000015147) ERC2 (ENSAPEG00000015094) BSN (ENSAPEG00000015039) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Eupercaria ANCESTRAL SPECIES ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT01060000248756 ENSGT00940000166776 Eupecaria_A ANCESTRAL SPECIES ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT01060000248756 ENSGT00940000166776 Ballan wrasse MODERN SPECIES 50 ptpdc1a (ENSLBEG00000008086) wnt7aa (ENSLBEG00000008126) FBLN2 (ENSLBEG00000008152) hdac11 (ENSLBEG00000008220) IQSEC1 (ENSLBEG00000008323) acad9 (ENSLBEG00000008467) EFCC1 (ENSLBEG00000008614) ##22 CFAP57 (ENSLBEG00000008640) nuf2 (ENSLBEG00000008717) ap5b1 (ENSLBEG00000008749) zgc:112255 (ENSLBEG00000008772) P3H1 (ENSLBEG00000008795) cldn19 (ENSLBEG00000008853) ENSLBEG00000008957 nucks1a (ENSLBEG00000009131) ENSLBEG00000009178 elk4 (ENSLBEG00000009265) mfsd4aa (ENSLBEG00000009303) CDK18 (ENSLBEG00000009357) ENSLBEG00000009430 slc41a1 (ENSLBEG00000009491) acot8 (ENSLBEG00000009600) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT01060000248756 ENSGT00940000166776 Perciformes ANCESTRAL SPECIES ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT00940000166776 ENSGT00950000183042.a.a Cottioidei ANCESTRAL SPECIES ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148.d ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266 ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT00940000166776 ENSGT00950000183042.a.a ENSGT00940000165705 Lumpfish MODERN SPECIES 20 aldh1l1 (ENSCLMG00005019878) pdrg1 (ENSCLMG00005019877) ENSCLMG00005019874 ENSCLMG00005019872 cstf1 (ENSCLMG00005019871) CASS4 (ENSCLMG00005019843) FAM120A (ENSCLMG00005019832) phf2 (ENSCLMG00005019801) barx1 (ENSCLMG00005019799) ptpdc1a (ENSCLMG00005019784) wnt7aa (ENSCLMG00005019783) FBLN2 (ENSCLMG00005019782) hdac11 (ENSCLMG00005019781) IQSEC1 (ENSCLMG00005019766) acad9 (ENSCLMG00005019061) EFCC1 (ENSCLMG00005019046) ##22 CFAP57 (ENSCLMG00005019034) nuf2 (ENSCLMG00005019030) ap5b1 (ENSCLMG00005019028) zgc:112255 (ENSCLMG00005019026) P3H1 (ENSCLMG00005019021) cldn19 (ENSCLMG00005019018) ENSCLMG00005018886 nucks1a (ENSCLMG00005018885) ENSCLMG00005018884 elk4 (ENSCLMG00005018883) mfsd4aa (ENSCLMG00005018881) CDK18 (ENSCLMG00005018880) ENSCLMG00005018878 slc41a1 (ENSCLMG00005018859) ENSCLMG00005018858 Stickleback MODERN SPECIES 17 aldh1l1 (ENSGACG00000011258) pdrg1 (ENSGACG00000011254) ENSGACG00000011250 cstf1 (ENSGACG00000011248) ENSGACG00000011245 phf2 (ENSGACG00000011241) barx1 (ENSGACG00000011231) ENSGACG00000011227 ptpdc1a (ENSGACG00000011220) wnt7aa (ENSGACG00000011183) FBLN2 (ENSGACG00000011170) hdac11 (ENSGACG00000011150) IQSEC1 (ENSGACG00000011143) acad9 (ENSGACG00000011107) ENSGACG00000011105 EFCC1 (ENSGACG00000011102) ##22 CFAP57 (ENSGACG00000011090) nuf2 (ENSGACG00000011074) ap5b1 (ENSGACG00000011070) zgc:112255 (ENSGACG00000011063) P3H1 (ENSGACG00000011029) cldn19 (ENSGACG00000010998) ENSGACG00000010996 ENSGACG00000010989 nucks1a (ENSGACG00000010977) ENSGACG00000010974 elk4 (ENSGACG00000010970) mfsd4aa (ENSGACG00000010962) CDK18 (ENSGACG00000010953) ENSGACG00000010949 slc41a1 (ENSGACG00000010942) Perciformes_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Pike perch MODERN SPECIES 11 ENSSLUG00000020334 ENSSLUG00000020337 ENSSLUG00000020341 ENSSLUG00000020348 ENSSLUG00000020352 ENSSLUG00000020358 optc (ENSSLUG00000020377) cacna1sa (ENSSLUG00000020390) apobec2a (ENSSLUG00000020414) ENSSLUG00000020418 FBLN2 (ENSSLUG00000020453) hdac11 (ENSSLUG00000020749) IQSEC1 (ENSSLUG00000020822) acad9 (ENSSLUG00000021567) ENSSLUG00000022288 EFCC1 (ENSSLUG00000022309) ##22 CFAP57 (ENSSLUG00000022323) nuf2 (ENSSLUG00000022336) ap5b1 (ENSSLUG00000022344) zgc:112255 (ENSSLUG00000022348) P3H1 (ENSSLUG00000022381) cldn19 (ENSSLUG00000022435) ENSSLUG00000022445 nucks1a (ENSSLUG00000022462) ENSSLUG00000022472 ENSSLUG00000022480 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Large yellow croaker MODERN SPECIES PCGF3 (ENSLCRG00005019989) CPLX1 (ENSLCRG00005019990) SMU1 (ENSLCRG00005019993) CPXM1 (ENSLCRG00005019998) ELP1 (ENSLCRG00005020427) ARHGEF37 (ENSLCRG00005020468) ENSLCRG00005020469 pde6a (ENSLCRG00005020486) SLC26A2 (ENSLCRG00005022159) HTR4 (ENSLCRG00005022161) lman2 (ENSLCRG00005022165) SLITRK4 (ENSLCRG00005022181) IQSEC1 (ENSLCRG00005022191) acad9 (ENSLCRG00005022380) ENSLCRG00005022410 EFCC1 (ENSLCRG00005022411) ##22 CFAP57 (ENSLCRG00005022412) nuf2 (ENSLCRG00005022415) FRMD4B (ENSLCRG00005022417) arl6ip5a (ENSLCRG00005022419) trnt1 (ENSLCRG00005022420) ENSLCRG00005022421 setmar (ENSLCRG00005022422) ITPR1 (ENSLCRG00005022437) bhlhe40 (ENSLCRG00005022605) NAAA (ENSLCRG00005022608) ENSLCRG00005022610 arl8bb (ENSLCRG00005022612) ENSLCRG00005022615 SEMA3F (ENSLCRG00005022633) camkvb (ENSLCRG00005022967) Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000165514 ENSGT00940000160129 ENSGT00940000153393.B ENSGT00390000018016 ENSGT01050000244866.D.a.c ENSGT00940000154697.a.b ENSGT01090000260040.b.a.b.y.b ENSGT00940000158934 ENSGT00940000166055 ENSGT00390000013951 ENSGT00390000007458 ENSGT00940000154583.e.a ENSGT00940000155615.i.a ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00950000183014.f.b.a.b ##22 ENSGT00620000088018 ENSGT00390000004199 ENSGT00530000064721 ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000156266.h ENSGT00940000156266.g ENSGT00940000153414.B ENSGT00940000166195 ENSGT00940000158900 ENSGT00530000063320.A.i ENSGT00940000159482 ENSGT00940000166776 ENSGT00950000183042.a.a Fugu MODERN SPECIES 10 ENSTRUG00000026569 ENSTRUG00000031423 ccndbp1 (ENSTRUG00000029215) ENSTRUG00000029240 tomm34 (ENSTRUG00000015199) YWHAB (ENSTRUG00000020816) RIMS4 (ENSTRUG00000015860) ENSTRUG00000015868 LSM3 (ENSTRUG00000030573) khk (ENSTRUG00000015877) slc6a6b (ENSTRUG00000015900) GRIP2 (ENSTRUG00000016027) IQSEC1 (ENSTRUG00000002405) acad9 (ENSTRUG00000002716) ENSTRUG00000027720 EFCC1 (ENSTRUG00000018571) ##22 ENSTRUG00000002623 nuf2 (ENSTRUG00000001944) ap5b1 (ENSTRUG00000033115) zgc:112255 (ENSTRUG00000001822) P3H1 (ENSTRUG00000001367) cldn19 (ENSTRUG00000030506) ENSTRUG00000026051 ENSTRUG00000030006 nucks1 (ENSTRUG00000024756) ENSTRUG00000023218 elk4 (ENSTRUG00000000077) mfsd4aa (ENSTRUG00000000083) CDK18 (ENSTRUG00000000091) ENSTRUG00000000103 slc41a1 (ENSTRUG00000000115) Tetraodon MODERN SPECIES 2 cox6c (ENSTNIG00000000694) ANGPT4 (ENSTNIG00000005217) sec13 (ENSTNIG00000002764) ccndbp1 (ENSTNIG00000002763) ENSTNIG00000004117 tomm34 (ENSTNIG00000004118) YWHAB (ENSTNIG00000004119) RIMS4 (ENSTNIG00000004121) ENSTNIG00000004122 LSM3 (ENSTNIG00000005589) khk (ENSTNIG00000005588) slc6a6b (ENSTNIG00000005989) GRIP2 (ENSTNIG00000005990) IQSEC1 (ENSTNIG00000007391) acad9 (ENSTNIG00000007390) EFCC1 (ENSTNIG00000007389) ##22 CFAP57 (ENSTNIG00000007388) nuf2 (ENSTNIG00000007387) ap5b1 (ENSTNIG00000001487) zgc:112255 (ENSTNIG00000007386) P3H1 (ENSTNIG00000007385) cldn19 (ENSTNIG00000007384) ENSTNIG00000007383 ENSTNIG00000007382 elk4 (ENSTNIG00000007381) mfsd4aa (ENSTNIG00000007380) CDK18 (ENSTNIG00000007379) ENSTNIG00000007378 slc41a1 (ENSTNIG00000007377) ENSTNIG00000007376 etnk2 (ENSTNIG00000007375) Cod MODERN SPECIES 4 ENSGMOG00000036290 ENSGMOG00000013978 ENSGMOG00000013925 ENSGMOG00000027519 ENSGMOG00000034249 FAM120A (ENSGMOG00000037041) phf2 (ENSGMOG00000004936) ENSGMOG00000022585 barx1 (ENSGMOG00000023980) ptpdc1a (ENSGMOG00000033201) wnt7aa (ENSGMOG00000004893) ENSGMOG00000024481 hdac11 (ENSGMOG00000001447) acad9 (ENSGMOG00000005083) ENSGMOG00000026129 EFCC1 (ENSGMOG00000030912) ##22 ENSGMOG00000005004 ENSGMOG00000004997 ENSGMOG00000004987 ngfb (ENSGMOG00000029485) ENSGMOG00000015379 ENSGMOG00000019917 ENSGMOG00000026097 rplp2 (ENSGMOG00000015348) ENSGMOG00000033353 ENSGMOG00000036320 ENSGMOG00000015304 tead3b (ENSGMOG00000023663) ENSGMOG00000028122 ENSGMOG00000015210 ENSGMOG00000015197 Protacanthopterygii ANCESTRAL SPECIES 95 ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00390000004199 ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00950000183077.a.b ENSGT00390000003839.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000156062.m ENSGT00940000159798 ENSGT00940000167517.a Salmoninae ANCESTRAL SPECIES 400 ENSGT00940000157562.q.a.a.b ENSGT00940000161921.e.a.b ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a.e ENSGT00530000063168.a.a.a.f.a ENSGT00940000158148.e ENSGT00940000160218.i ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a.b ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00940000161980 ENSGT00940000164112.a.l ENSGT00390000014109 ENSGT00950000183041.A.a.a.a ENSGT00940000156084.b ENSGT00950000183077.a.b.s ENSGT00390000003839.b ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000158273.n Huchen MODERN SPECIES 1011 ENSHHUG00000049251 EFCC1 (ENSHHUG00000049254) ##22 acvr2aa (ENSHHUG00000049259) MBD5 (ENSHHUG00000049432) epc2 (ENSHHUG00000049442) ENSHHUG00000049445 lypd6b (ENSHHUG00000049451) LYPD6 (ENSHHUG00000049454) mmadhcb (ENSHHUG00000049459) Salmoninae_a ANCESTRAL SPECIES 78 ENSGT00940000161921.e.a.b ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000158339 ENSGT01010000229826 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a.e ENSGT00940000158148.e ENSGT00940000160218.i ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a.a.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00940000161980 ENSGT00940000164112.a.l ENSGT00950000183041.A.a.a.a.b ENSGT00940000156084.b ENSGT00950000183077.a.b.s ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000003839.a ENSGT00390000013266 ENSGT00940000158273.n Salmo ANCESTRAL SPECIES 61 ENSGT00940000161921.e.a.b ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000158339 ENSGT01010000229826 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a.e ENSGT00940000158148.e ENSGT00940000160218.i ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a.b ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000161980 ENSGT00940000164112.a.l ENSGT00950000183041.A.a.a.a.b ENSGT00940000156084.b ENSGT00950000183077.a.b.s ENSGT00390000003839.b ENSGT01030000235208 ENSGT00390000013266 ENSGT00940000158273.n River trout MODERN SPECIES 7 ENSSTUG00000036461 pdcd2l (ENSSTUG00000036457) ENSSTUG00000036455 ENSSTUG00000036450 FAM120A (ENSSTUG00000036361) phf2 (ENSSTUG00000036161) barx1 (ENSSTUG00000036146) ptpdc1a (ENSSTUG00000036105) ENSSTUG00000036095 wnt7aa (ENSSTUG00000036082) ENSSTUG00000035792 ENSSTUG00000035774 hdac11 (ENSSTUG00000035494) IQSEC1 (ENSSTUG00000035075) ENSSTUG00000035002 EFCC1 (ENSSTUG00000034995) ##22 ENSSTUG00000034980 ENSSTUG00000034976 ENSSTUG00000034973 rab43 (ENSSTUG00000034972) zgc:77375 (ENSSTUG00000034964) ENSSTUG00000034948 raf1b (ENSSTUG00000034296) mkrn2 (ENSSTUG00000034245) MKRN2OS (ENSSTUG00000034234) ENSSTUG00000034229 tsen2 (ENSSTUG00000034204) PPARG (ENSSTUG00000034013) Atlantic salmon MODERN SPECIES 14 ENSSSAG00000088653 ENSSSAG00000084872 FAM120A (ENSSSAG00000067237) phf2 (ENSSSAG00000087277) ENSSSAG00000121063 ENSSSAG00000083877 barx1 (ENSSSAG00000114886) ptpdc1a (ENSSSAG00000008674) ENSSSAG00000064612 FBLN2 (ENSSSAG00000008760) hdac11 (ENSSSAG00000008746) ENSSSAG00000121382 IQSEC1 (ENSSSAG00000009162) ENSSSAG00000008800 ENSSSAG00000091562 ENSSSAG00000008818 ##22 rab43 (ENSSSAG00000117714) zgc:77375 (ENSSSAG00000084248) ENSSSAG00000008850 raf1b (ENSSSAG00000015667) mkrn2 (ENSSSAG00000028437) mkrn2os (ENSSSAG00000028619) tsen2 (ENSSSAG00000028772) PPARG (ENSSSAG00000029040) Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Rainbow trout MODERN SPECIES 28 ENSOMYG00000006946 ENSOMYG00000023229 ##22 rab43 (ENSOMYG00000006335) ENSOMYG00000066321 zgc:77375 (ENSOMYG00000006359) ENSOMYG00000059639 ENSOMYG00000006436 mkrn2 (ENSOMYG00000006467) ENSOMYG00000006499 ENSOMYG00000006513 ENSOMYG00000053804 PPARG (ENSOMYG00000006827) ENSOMYG00000062142 ENSOMYG00000052537 IQSEC1 (ENSOMYG00000006284) HDAC11 (ENSOMYG00000006191) FBLN2 (ENSOMYG00000056000) Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Chinook salmon MODERN SPECIES 1257 EFCC1 (ENSOTSG00005039285) ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 2 ENSSGRG00000054194 alpl (ENSSGRG00000054157) ece1 (ENSSGRG00000054147) EIF4G3 (ENSSGRG00000054059) cstf1 (ENSSGRG00000054052) ENSSGRG00000054050 FAM120A (ENSSGRG00000054022) phf2 (ENSSGRG00000053866) ENSSGRG00000053863 wnt7aa (ENSSGRG00000053860) FBLN2 (ENSSGRG00000053847) hdac11 (ENSSGRG00000053845) hdac11 (ENSSGRG00000053844) IQSEC1 (ENSSGRG00000053609) acad9 (ENSSGRG00000053487) EFCC1 (ENSSGRG00000053478) ##22 map1lc3a (ENSSGRG00000053476) ENSSGRG00000053472 st3gal8 (ENSSGRG00000053470) ENSSGRG00000053442 ENSSGRG00000053441 cpne1 (ENSSGRG00000053287) rbm12 (ENSSGRG00000053282) ppcs (ENSSGRG00000053280) foxj3 (ENSSGRG00000053279) PRDM2 (ENSSGRG00000053278) kaznb (ENSSGRG00000053276) ENSSGRG00000053273 tmem51b (ENSSGRG00000053271) skib (ENSSGRG00000053270) PLCH2 (ENSSGRG00000053266) Golden-line barbel MODERN SPECIES 414 ENSSGRG00000012768 ENSSGRG00000012766 hdac11 (ENSSGRG00000012764) IQSEC1 (ENSSGRG00000011803) acad9 (ENSSGRG00000009682) EFCC1 (ENSSGRG00000009648) ##22 map1lc3a (ENSSGRG00000009644) ENSSGRG00000009643 st3gal8 (ENSSGRG00000009642) ENSSGRG00000008749 ENSSGRG00000008329 ENSSGRG00000008318 rbm12 (ENSSGRG00000008317) utp3 (ENSSGRG00000008316) ppcs (ENSSGRG00000008315) foxj3 (ENSSGRG00000008307) PRDM2 (ENSSGRG00000008306) Characiphysae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Electric eel MODERN SPECIES 723 IQSEC1 (ENSEEEG00000002255) acad9 (ENSEEEG00000002291) ENSEEEG00000002305 EFCC1 (ENSEEEG00000002306) ##22 map1lc3a (ENSEEEG00000002308) dynlrb1 (ENSEEEG00000002315) st3gal8 (ENSEEEG00000002324) ENSEEEG00000002325 ENSEEEG00000002330 cpne1 (ENSEEEG00000002486) utp3 (ENSEEEG00000004830) ppcs (ENSEEEG00000004832) Reedfish MODERN SPECIES 9 phf2 (ENSECRG00000021385) barx1 (ENSECRG00000021365) ptpdc1a (ENSECRG00000021347) PSME3 (ENSECRG00000021334) ENSECRG00000021325 ENSECRG00000021315 ENSECRG00000021298 wnt7aa (ENSECRG00000021274) FBLN2 (ENSECRG00000021236) hdac11 (ENSECRG00000021200) NUP210 (ENSECRG00000021120) NUP210 (ENSECRG00000021042) IQSEC1 (ENSECRG00000020985) acad9 (ENSECRG00000020941) ENSECRG00000020909 EFCC1 (ENSECRG00000020895) ##22 GP9 (ENSECRG00000020886) ENSECRG00000020870 nuf2 (ENSECRG00000020838) rab43 (ENSECRG00000020826) zgc:77375 (ENSECRG00000020811) isy1 (ENSECRG00000020784) cnbpb (ENSECRG00000020753) raf1b (ENSECRG00000020686) mkrn2 (ENSECRG00000020646) MKRN2OS (ENSECRG00000020632) TSEN2 (ENSECRG00000020616) PPARG (ENSECRG00000020604) timp4.2 (ENSECRG00000020586) syn2a (ENSECRG00000020574) tamm41 (ENSECRG00000020546) Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT01000000222140 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B Coelacanth MODERN SPECIES 1802 IQSEC1 (ENSLACG00000005898) ACAD9 (ENSLACG00000004617) ENSLACG00000004102 EFCC1 (ENSLACG00000002500) ##22 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT01000000222140 ENSGT00390000004113 ENSGT00940000158523 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B Anura ANCESTRAL SPECIES 311 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a Frog MODERN SPECIES 4 tmem40 (ENSXETG00000036823) bicd2 (ENSXETG00000034175) susd3 (ENSXETG00000030789) card19 (ENSXETG00000044794) ninj1 (ENSXETG00000015640) syn2 (ENSXETG00000036264) TIMP4 (ENSXETG00000042959) ENSXETG00000047492 tamm41 (ENSXETG00000046611) atg7 (ENSXETG00000044332) hrh1 (ENSXETG00000007717) nup210 (ENSXETG00000030339) iqsec1 (ENSXETG00000045628) acad9 (ENSXETG00000001719) cfap92 (ENSXETG00000042497) ENSXETG00000044371 ##22 GP9 (ENSXETG00000047015) ENSXETG00000043631 yipf4 (ENSXETG00000042599) tsen2 (ENSXETG00000044211) ENSXETG00000048736 cnbp (ENSXETG00000045734) ENSXETG00000047567 barx1 (ENSXETG00000038412) ENSXETG00000035387 ENSXETG00000042279 ENSXETG00000045644 phf2 (ENSXETG00000022559) ENSXETG00000045384 ENSXETG00000042150 wnk2 (ENSXETG00000022548) Amniota ANCESTRAL SPECIES 22 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 Sauria ANCESTRAL SPECIES 13 ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Archelosauria ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Cryptodira ANCESTRAL SPECIES 41 ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000018085.a.b.a ENSGT00940000154902.k ENSGT00940000154902.j.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000154902.k ENSGT00940000154902.j.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00940000167251 ENSGT00390000014109.c.b ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000159798 ENSGT00940000156062 ENSGT00390000000616 Goode s thornscrub tortoise MODERN SPECIES 21 RPL36AL (ENSGEVG00005007124) AHNAK (ENSGEVG00005007107) FAM120A (ENSGEVG00005006605) PHF2 (ENSGEVG00005006330) BARX1 (ENSGEVG00005006201) ENSGEVG00005006181 ENSGEVG00005006143 WNT7A (ENSGEVG00005006076) FBLN2 (ENSGEVG00005005981) ENSGEVG00005005963 HDAC11 (ENSGEVG00005005930) NUP210 (ENSGEVG00005005766) IQSEC1 (ENSGEVG00005005708) ACAD9 (ENSGEVG00005005630) ENSGEVG00005005602 ENSGEVG00005005535 ##22 GP9 (ENSGEVG00005005510) RAB43 (ENSGEVG00005005485) ENSGEVG00005005430 ENSGEVG00005005367 ENSGEVG00005005307 ENSGEVG00005018078 RAF1 (ENSGEVG00005018027) MKRN2 (ENSGEVG00005018003) MKRN2OS (ENSGEVG00005017994) TSEN2 (ENSGEVG00005017977) PPARG (ENSGEVG00005017941) TIMP4 (ENSGEVG00005017900) SYN2 (ENSGEVG00005017832) TAMM41 (ENSGEVG00005017797) VGLL4 (ENSGEVG00005017769) Abingdon island giant tortoise MODERN SPECIES 175 IQSEC1 (ENSCABG00000017930) ACAD9 (ENSCABG00000017773) CFAP92 (ENSCABG00000017731) EFCC1 (ENSCABG00000017727) ##22 GP9 (ENSCABG00000017726) RAB43 (ENSCABG00000017723) ENSCABG00000017719 ISY1 (ENSCABG00000017718) ENSCABG00000017717 Emydidae ANCESTRAL SPECIES 9 ENSGT00940000154902.k ENSGT00940000154902.j.a ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Three-toed box turtle MODERN SPECIES 107 IQSEC1 (ENSTMTG00000010796) ACAD9 (ENSTMTG00000010840) CFAP92 (ENSTMTG00000010898) EFCC1 (ENSTMTG00000010945) ##22 GP9 (ENSTMTG00000010971) RAB43 (ENSTMTG00000015431) ENSTMTG00000015448 ISY1 (ENSTMTG00000015483) ENSTMTG00000015505 RAF1 (ENSTMTG00000015520) MKRN2 (ENSTMTG00000015544) ENSTMTG00000015561 TSEN2 (ENSTMTG00000015573) PPARG (ENSTMTG00000015596) SYN2 (ENSTMTG00000015621) TIMP4 (ENSTMTG00000015688) TAMM41 (ENSTMTG00000015707) VGLL4 (ENSTMTG00000015729) ATG7 (ENSTMTG00000015759) Archosauria ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Aves ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Neognathae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Galloanserae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Anatidae ANCESTRAL SPECIES 54 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Pink-footed goose MODERN SPECIES 110 ENSABRG00000005944 NINJ1 (ENSABRG00000005966) WNK2 (ENSABRG00000005987) FAM120A (ENSABRG00000006133) PHF2 (ENSABRG00000006684) BARX1 (ENSABRG00000007373) PTPDC1 (ENSABRG00000007379) ENSABRG00000007383 WNT7A (ENSABRG00000007393) FBLN2 (ENSABRG00000007418) HDAC11 (ENSABRG00000007799) NUP210 (ENSABRG00000007910) IQSEC1 (ENSABRG00000008262) ACAD9 (ENSABRG00000008890) CFAP92 (ENSABRG00000009441) EFCC1 (ENSABRG00000009460) ##22 GP9 (ENSABRG00000009470) RAB43 (ENSABRG00000009489) ENSABRG00000009510 ISY1 (ENSABRG00000009673) ENSABRG00000009679 RAF1 (ENSABRG00000009695) MKRN2 (ENSABRG00000009708) ENSABRG00000009722 TSEN2 (ENSABRG00000009724) PPARG (ENSABRG00000009733) SYN2 (ENSABRG00000009741) TIMP4 (ENSABRG00000009748) TAMM41 (ENSABRG00000009773) VGLL4 (ENSABRG00000009786) ATG7 (ENSABRG00000009797) Lepidosauria ANCESTRAL SPECIES 14 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Episquamata ANCESTRAL SPECIES 4 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000159798 ENSGT00940000156062 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062.k ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Indian cobra MODERN SPECIES 1 NINJ1 (ENSNNAG00000017716) ENSNNAG00000017718 ENSNNAG00000017724 FAM120A (ENSNNAG00000017728) PHF2 (ENSNNAG00000017735) BARX1 (ENSNNAG00000017741) PTPDC1 (ENSNNAG00000017745) ENSNNAG00000017751 WNT7A (ENSNNAG00000017764) FBLN2 (ENSNNAG00000017789) ENSNNAG00000017810 NUP210 (ENSNNAG00000017830) IQSEC1 (ENSNNAG00000017851) ACAD9 (ENSNNAG00000017867) CFAP92 (ENSNNAG00000017912) EFCC1 (ENSNNAG00000017915) ##22 ENSNNAG00000017916 ENSNNAG00000017919 RAB43 (ENSNNAG00000017921) ENSNNAG00000017924 ISY1 (ENSNNAG00000017943) ENSNNAG00000017946 ENSNNAG00000017950 RAF1 (ENSNNAG00000017955) MKRN2 (ENSNNAG00000017961) MKRN2OS (ENSNNAG00000017966) TSEN2 (ENSNNAG00000017971) PPARG (ENSNNAG00000017984) SYN2 (ENSNNAG00000017991) ENSNNAG00000018001 TAMM41 (ENSNNAG00000018006) Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148.l ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062.k ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000164282 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148.l ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062.k ENSGT00940000159798 ENSGT00390000000616 ENSGT00390000003282.B ENSGT00390000017509 Eastern brown snake MODERN SPECIES 3 ENSPTXG00000006795 ENSPTXG00000006796 ENSPTXG00000006798 FAM120A (ENSPTXG00000006800) PHF2 (ENSPTXG00000006801) BARX1 (ENSPTXG00000006802) PTPDC1 (ENSPTXG00000006803) ENSPTXG00000006804 ENSPTXG00000006808 WNT7A (ENSPTXG00000006810) FBLN2 (ENSPTXG00000006820) NUP210 (ENSPTXG00000006850) IQSEC1 (ENSPTXG00000006860) ACAD9 (ENSPTXG00000007049) CFAP92 (ENSPTXG00000007050) EFCC1 (ENSPTXG00000007051) ##22 GP9 (ENSPTXG00000007052) ENSPTXG00000007053 RAB43 (ENSPTXG00000007054) ENSPTXG00000007055 ISY1 (ENSPTXG00000007061) ENSPTXG00000007062 RAF1 (ENSPTXG00000007063) MKRN2 (ENSPTXG00000007064) MKRN2OS (ENSPTXG00000007065) TSEN2 (ENSPTXG00000007066) PPARG (ENSPTXG00000007067) SYN2 (ENSPTXG00000007068) ENSPTXG00000007073 TAMM41 (ENSPTXG00000007075) VGLL4 (ENSPTXG00000007085) Blue-lipped sea krait MODERN SPECIES 4640 EFCC1 (ENSLLTG00000008795) ##22 Laterata ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Common wall lizard MODERN SPECIES 10 NINJ1 (ENSPMRG00000000544) WNK2 (ENSPMRG00000000441) FAM120A (ENSPMRG00000000275) PHF2 (ENSPMRG00000000200) ENSPMRG00000000148 BARX1 (ENSPMRG00000000139) ENSPMRG00000000131 ENSPMRG00000013312 ENSPMRG00000013308 WNT7A (ENSPMRG00000013303) FBLN2 (ENSPMRG00000013185) NUP210 (ENSPMRG00000012830) IQSEC1 (ENSPMRG00000012774) ACAD9 (ENSPMRG00000012761) CFAP92 (ENSPMRG00000012752) EFCC1 (ENSPMRG00000012744) ##22 ENSPMRG00000012740 ENSPMRG00000012736 GP9 (ENSPMRG00000012730) ENSPMRG00000012727 RAB43 (ENSPMRG00000012725) ENSPMRG00000012718 ISY1 (ENSPMRG00000012711) ENSPMRG00000012709 RAF1 (ENSPMRG00000012698) MKRN2 (ENSPMRG00000012692) MKRN2OS (ENSPMRG00000012689) TSEN2 (ENSPMRG00000012682) PPARG (ENSPMRG00000012674) ENSPMRG00000012669 TIMP4 (ENSPMRG00000012664) tuatara MODERN SPECIES 655 ENSSPUG00000004251 ##22 Mammalia ANCESTRAL SPECIES 18 ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000164252.a.b ENSGT00940000154004.b ENSGT00940000154473.b ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00950000183041.A.f ENSGT00940000156084 ENSGT00950000183077.a.b ENSGT01030000235208 ENSGT00390000003839 ENSGT00390000013266 ENSGT00940000158273 ENSGT00940000156062 ENSGT00940000159798 ENSGT00390000000616 Theria ANCESTRAL SPECIES 28 ENSGT00390000006976 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Eutheria ANCESTRAL SPECIES 14 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Atlantogenata ANCESTRAL SPECIES 34 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.d ENSGT01030000234553.b.b.d.c.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Afrotheria ANCESTRAL SPECIES 32 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a ENSGT00940000156836 ENSGT00390000011364 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a ENSGT00940000156836 ENSGT00390000011364 Elephant MODERN SPECIES 49 CCDC174 (ENSLAFG00000012663) GRIP2 (ENSLAFG00000032264) SLC6A6 (ENSLAFG00000015145) LSM3 (ENSLAFG00000023308) XPC (ENSLAFG00000022512) TMEM43 (ENSLAFG00000006731) CHCHD4 (ENSLAFG00000018489) WNT7A (ENSLAFG00000001335) FBLN2 (ENSLAFG00000013555) HDAC11 (ENSLAFG00000000504) NUP210 (ENSLAFG00000000497) IQSEC1 (ENSLAFG00000017531) ACAD9 (ENSLAFG00000008449) ENSLAFG00000008454 ENSLAFG00000014529 ENSLAFG00000028660 ##22 ENSLAFG00000014535 GP9 (ENSLAFG00000029674) RAB43 (ENSLAFG00000023035) ISY1 (ENSLAFG00000004015) CNBP (ENSLAFG00000002502) COPG1 (ENSLAFG00000013929) HMCES (ENSLAFG00000013939) RAB7A (ENSLAFG00000007945) RPN1 (ENSLAFG00000000220) GATA2 (ENSLAFG00000029178) EEFSEC (ENSLAFG00000001997) RUVBL1 (ENSLAFG00000017383) SEC61A1 (ENSLAFG00000009106) KBTBD12 (ENSLAFG00000014423) MGLL (ENSLAFG00000026229) Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Cetacea ANCESTRAL SPECIES 7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.u ENSGT01030000234553.b.b.d.c.b.e ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.j ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A.b.a ENSGT00390000003721.d.a Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000153655.B ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.u ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.j ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A.b.a ENSGT00390000003721.d.a Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000153655.B ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.u.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439.d ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.j ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A.b.a ENSGT00390000003721.d.a Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000153655.B ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.u.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439.d ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.j ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A.b.a ENSGT00390000003721.d.a Vaquita MODERN SPECIES 2 FGD5 (ENSPSNG00000022708) CCDC174 (ENSPSNG00000022707) GRIP2 (ENSPSNG00000022705) SLC6A6 (ENSPSNG00000022704) ENSPSNG00000022703 XPC (ENSPSNG00000022702) TMEM43 (ENSPSNG00000022701) ENSPSNG00000022700 WNT7A (ENSPSNG00000022699) FBLN2 (ENSPSNG00000022698) HDAC11 (ENSPSNG00000022697) NUP210 (ENSPSNG00000022696) IQSEC1 (ENSPSNG00000022695) ACAD9 (ENSPSNG00000022694) CFAP92 (ENSPSNG00000022693) EFCC1 (ENSPSNG00000022692) ##22 GP9 (ENSPSNG00000022691) RAB43 (ENSPSNG00000022690) ISY1 (ENSPSNG00000022689) CNBP (ENSPSNG00000022688) COPG1 (ENSPSNG00000022687) HMCES (ENSPSNG00000022686) H1-10 (ENSPSNG00000022685) RAB7A (ENSPSNG00000022683) RPN1 (ENSPSNG00000022682) GATA2 (ENSPSNG00000022681) DNAJB8 (ENSPSNG00000022680) ENSPSNG00000022679 EEFSEC (ENSPSNG00000022678) ENSPSNG00000022677 SEC61A1 (ENSPSNG00000022676) Monodontidae ANCESTRAL SPECIES 4 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.u.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439.d ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.j ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A.b.a ENSGT00390000003721.d.a ENSGT00940000156836 Narwhal MODERN SPECIES 310 CCDC174 (ENSMMNG00015012708) ENSMMNG00015012733 ENSMMNG00015012756 SLC6A6 (ENSMMNG00015012780) LSM3 (ENSMMNG00015012798) XPC (ENSMMNG00015012813) TMEM43 (ENSMMNG00015012854) CHCHD4 (ENSMMNG00015012871) WNT7A (ENSMMNG00015012882) FBLN2 (ENSMMNG00015012901) HDAC11 (ENSMMNG00015012961) NUP210 (ENSMMNG00015013010) IQSEC1 (ENSMMNG00015013071) ACAD9 (ENSMMNG00015013136) CFAP92 (ENSMMNG00015013200) EFCC1 (ENSMMNG00015013211) ##22 GP9 (ENSMMNG00015013220) RAB43 (ENSMMNG00015013271) ISY1 (ENSMMNG00015013280) ENSMMNG00015013291 CNBP (ENSMMNG00015013299) COPG1 (ENSMMNG00015013321) HMCES (ENSMMNG00015013354) H1-10 (ENSMMNG00015013367) RAB7A (ENSMMNG00015013387) RPN1 (ENSMMNG00015013416) GATA2 (ENSMMNG00015013442) EEFSEC (ENSMMNG00015013459) DNAJB8 (ENSMMNG00015013478) ENSMMNG00015013489 SEC61A1 (ENSMMNG00015013516) Sperm whale MODERN SPECIES 9 NR2C2 (ENSPCTG00005005417) ENSPCTG00005005367 FGD5 (ENSPCTG00005004623) C3orf20 (ENSPCTG00005004416) CCDC174 (ENSPCTG00005004364) ENSPCTG00005004303 SLC6A6 (ENSPCTG00005022008) CHCHD4 (ENSPCTG00005021998) TMEM43 (ENSPCTG00005021993) XPC (ENSPCTG00005021979) WNT7A (ENSPCTG00005021969) FBLN2 (ENSPCTG00005021931) IQSEC1 (ENSPCTG00005021839) ACAD9 (ENSPCTG00005021782) CFAP92 (ENSPCTG00005021671) EFCC1 (ENSPCTG00005021614) ##22 GP9 (ENSPCTG00005021605) RAB43 (ENSPCTG00005021593) CNBP (ENSPCTG00005021559) RAB7A (ENSPCTG00005021510) EEFSEC (ENSPCTG00005021497) RPN1 (ENSPCTG00005021424) GATA2 (ENSPCTG00005021380) ENSPCTG00005021354 RUVBL1 (ENSPCTG00005021315) SEC61A1 (ENSPCTG00005021231) KBTBD12 (ENSPCTG00005021183) MGLL (ENSPCTG00005021055) ABTB1 (ENSPCTG00005020971) ENSPCTG00005020956 PODXL2 (ENSPCTG00005020915) Blue whale MODERN SPECIES 2 CCDC174 (ENSBMSG00010011163) GRIP2 (ENSBMSG00010011207) SLC6A6 (ENSBMSG00010011361) LSM3 (ENSBMSG00010011411) XPC (ENSBMSG00010011503) TMEM43 (ENSBMSG00010011796) ENSBMSG00010011806 ENSBMSG00010011817 WNT7A (ENSBMSG00010011831) FBLN2 (ENSBMSG00010011854) HDAC11 (ENSBMSG00010011895) NUP210 (ENSBMSG00010011953) IQSEC1 (ENSBMSG00010012039) ACAD9 (ENSBMSG00010012123) CFAP92 (ENSBMSG00010012178) EFCC1 (ENSBMSG00010012255) ##22 GP9 (ENSBMSG00010012325) RAB43 (ENSBMSG00010012334) ISY1 (ENSBMSG00010012343) CNBP (ENSBMSG00010012370) COPG1 (ENSBMSG00010012394) HMCES (ENSBMSG00010012470) H1-10 (ENSBMSG00010012485) RAB7A (ENSBMSG00010012513) RPN1 (ENSBMSG00010012549) GATA2 (ENSBMSG00010012574) EEFSEC (ENSBMSG00010012611) DNAJB8 (ENSBMSG00010012656) ENSBMSG00010012665 SEC61A1 (ENSBMSG00010012693) KBTBD12 (ENSBMSG00010012727) Pecora ANCESTRAL SPECIES 17 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Percora_a ANCESTRAL SPECIES 19 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Bovidae ANCESTRAL SPECIES 19 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Bovinae ANCESTRAL SPECIES 16 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Bos ANCESTRAL SPECIES 16 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Bos_b ANCESTRAL SPECIES 17 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Hybrid Bos Indicus MODERN SPECIES 14 LSM3 (ENSBIXG00005027836) TMEM43 (ENSBIXG00005027897) CHCHD4 (ENSBIXG00005027940) ENSBIXG00005027959 ENSBIXG00005028013 XPC (ENSBIXG00005004824) WNT7A (ENSBIXG00005004835) FBLN2 (ENSBIXG00005028202) ENSBIXG00005028341 NUP210 (ENSBIXG00005028460) IQSEC1 (ENSBIXG00005004938) ENSBIXG00005028683 ACAD9 (ENSBIXG00005028706) ENSBIXG00005028728 ENSBIXG00005028742 EFCC1 (ENSBIXG00005028776) ##22 ENSBIXG00005028788 RAB43 (ENSBIXG00005005001) ISY1 (ENSBIXG00005028914) CNBP (ENSBIXG00005028946) COPG1 (ENSBIXG00005028959) HMCES (ENSBIXG00005028993) H1-10 (ENSBIXG00005005106) RAB7A (ENSBIXG00005029044) ENSBIXG00005005134 RPN1 (ENSBIXG00005001966) GATA2 (ENSBIXG00005010558) DNAJB8 (ENSBIXG00005010579) ENSBIXG00005000713 EEFSEC (ENSBIXG00005010586) RUVBL1 (ENSBIXG00005010629) Cow MODERN SPECIES 14 GRIP2 (ENSBTAG00000011896) SLC6A6 (ENSBTAG00000011088) LSM3 (ENSBTAG00000007363) XPC (ENSBTAG00000007362) TMEM43 (ENSBTAG00000007360) CHCHD4 (ENSBTAG00000015529) ENSBTAG00000023918 ENSBTAG00000017173 WNT7A (ENSBTAG00000001668) FBLN2 (ENSBTAG00000004014) HDAC11 (ENSBTAG00000007208) NUP210 (ENSBTAG00000003665) IQSEC1 (ENSBTAG00000003237) ACAD9 (ENSBTAG00000003242) CFAP92 (ENSBTAG00000003244) EFCC1 (ENSBTAG00000005922) ##22 GP9 (ENSBTAG00000014666) RAB43 (ENSBTAG00000053386) ISY1 (ENSBTAG00000030915) CNBP (ENSBTAG00000012159) COPG1 (ENSBTAG00000013212) HMCES (ENSBTAG00000030930) H1-10 (ENSBTAG00000040116) RAB7A (ENSBTAG00000010193) ENSBTAG00000030941 RPN1 (ENSBTAG00000005191) GATA2 (ENSBTAG00000019707) DNAJB8 (ENSBTAG00000006179) ENSBTAG00000051049 EEFSEC (ENSBTAG00000030962) RUVBL1 (ENSBTAG00000020998) Caprinae ANCESTRAL SPECIES 15 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000007219 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630.i.a ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Goat MODERN SPECIES 14 GRIP2 (ENSCHIG00000016620) SLC6A6 (ENSCHIG00000024785) LSM3 (ENSCHIG00000024650) XPC (ENSCHIG00000017709) TMEM43 (ENSCHIG00000020802) CHCHD4 (ENSCHIG00000018477) ENSCHIG00000007622 WNT7A (ENSCHIG00000022383) ENSCHIG00000017980 HDAC11 (ENSCHIG00000010417) NUP210 (ENSCHIG00000018468) IQSEC1 (ENSCHIG00000025033) ACAD9 (ENSCHIG00000020865) ENSCHIG00000011159 ENSCHIG00000011214 EFCC1 (ENSCHIG00000010869) ##22 RAB43 (ENSCHIG00000003247) ISY1 (ENSCHIG00000008237) CNBP (ENSCHIG00000023083) COPG1 (ENSCHIG00000010891) HMCES (ENSCHIG00000018264) RAB7A (ENSCHIG00000001138) ENSCHIG00000007449 GATA2 (ENSCHIG00000014779) EEFSEC (ENSCHIG00000021838) RUVBL1 (ENSCHIG00000019299) SEC61A1 (ENSCHIG00000010014) KBTBD12 (ENSCHIG00000020444) MGLL (ENSCHIG00000011090) ABTB1 (ENSCHIG00000015051) ENSCHIG00000012154 Rambouillet Sheep MODERN SPECIES 10 MRPS25 (ENSOARG00020025871) NR2C2 (ENSOARG00020025878) C3orf20 (ENSOARG00020025893) CCDC174 (ENSOARG00020025904) GRIP2 (ENSOARG00020025919) SLC6A6 (ENSOARG00020025943) ENSOARG00020025950 TMEM43 (ENSOARG00020025957) CHCHD4 (ENSOARG00020025962) ENSOARG00020025966 ENSOARG00020025971 WNT7A (ENSOARG00020025976) HDAC11 (ENSOARG00020011736) NUP210 (ENSOARG00020013605) IQSEC1 (ENSOARG00020015244) EFCC1 (ENSOARG00020015940) ##22 GP9 (ENSOARG00020015968) RAB43 (ENSOARG00020015993) ISY1 (ENSOARG00020016029) CNBP (ENSOARG00020016289) COPG1 (ENSOARG00020016461) HMCES (ENSOARG00020016666) H1-10 (ENSOARG00020016747) ENSOARG00020016757 RAB7A (ENSOARG00020016775) ENSOARG00020017009 GATA2 (ENSOARG00020017118) DNAJB8 (ENSOARG00020017252) ENSOARG00020017282 EEFSEC (ENSOARG00020017339) RUVBL1 (ENSOARG00020017524) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a ENSGT00390000013132.z ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.z ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Equus ANCESTRAL SPECIES 5 ENSGT00940000154583.l ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.z ENSGT01030000234553.b.b.d.c.b.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT01090000263326 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Donkey MODERN SPECIES 13 LSM3 (ENSEASG00005034598) XPC (ENSEASG00005015444) TMEM43 (ENSEASG00005015445) CHCHD4 (ENSEASG00005015446) ENSEASG00005015447 ENSEASG00005024080 ENSEASG00005015785 WNT7A (ENSEASG00005026827) FBLN2 (ENSEASG00005015453) HDAC11 (ENSEASG00005015454) NUP210 (ENSEASG00005015493) ENSEASG00005015789 ENSEASG00005023789 ENSEASG00005015795 ENSEASG00005015802 EFCC1 (ENSEASG00005015805) ##22 RAB43 (ENSEASG00005015808) GP9 (ENSEASG00005015807) ENSEASG00005035595 ISY1 (ENSEASG00005015810) CNBP (ENSEASG00005036497) COPG1 (ENSEASG00005015813) ENSEASG00005015815 ENSEASG00005034619 ENSEASG00005006800 ENSEASG00005037828 RPN1 (ENSEASG00005006797) GATA2 (ENSEASG00005006794) ENSEASG00005006791 ENSEASG00005006788 EEFSEC (ENSEASG00005006786) Carnivora ANCESTRAL SPECIES 6 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Caniformia ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Canidae ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00390000013951.eb ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a ENSGT00390000010054.a.e ENSGT01030000234553.b.b.d.c.b.f ENSGT00940000158523 ENSGT00940000162932.o ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00900000143259 ENSGT00940000162567 ENSGT00940000158170 ENSGT00900000143336.d.a ENSGT00940000153556.A Dingo MODERN SPECIES 236 SLC6A6 (ENSCAFG00020005700) ENSCAFG00020005692 XPC (ENSCAFG00020005688) TMEM43 (ENSCAFG00020005686) CHCHD4 (ENSCAFG00020005681) ENSCAFG00020005677 ENSCAFG00020005651 WNT7A (ENSCAFG00020005641) ENSCAFG00020005637 FBLN2 (ENSCAFG00020005625) HDAC11 (ENSCAFG00020005611) NUP210 (ENSCAFG00020004962) IQSEC1 (ENSCAFG00020004925) ACAD9 (ENSCAFG00020004917) CFAP92 (ENSCAFG00020004897) ENSCAFG00020004886 ##22 GP9 (ENSCAFG00020004876) RAB43 (ENSCAFG00020004871) ISY1 (ENSCAFG00020004867) CNBP (ENSCAFG00020004863) COPG1 (ENSCAFG00020004856) HMCES (ENSCAFG00020004852) H1-10 (ENSCAFG00020004851) RAB7A (ENSCAFG00020004847) RPN1 (ENSCAFG00020004839) ENSCAFG00020004831 GATA2 (ENSCAFG00020004824) ENSCAFG00020004821 DNAJB8 (ENSCAFG00020004815) EEFSEC (ENSCAFG00020004811) ENSCAFG00020004807 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Mustelinae ANCESTRAL SPECIES 18 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951.gb ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A American mink MODERN SPECIES 147 WNT7A (ENSNVIG00000020255) FBLN2 (ENSNVIG00000020015) HDAC11 (ENSNVIG00000019877) NUP210 (ENSNVIG00000019785) IQSEC1 (ENSNVIG00000019714) ACAD9 (ENSNVIG00000019699) CFAP92 (ENSNVIG00000019644) EFCC1 (ENSNVIG00000019624) ##22 GP9 (ENSNVIG00000019619) RAB43 (ENSNVIG00000019614) ISY1 (ENSNVIG00000019590) CNBP (ENSNVIG00000019564) COPG1 (ENSNVIG00000018463) HMCES (ENSNVIG00000018380) H1-10 (ENSNVIG00000018376) ENSNVIG00000018366 ENSNVIG00000018317 RPN1 (ENSNVIG00000018278) GATA2 (ENSNVIG00000018256) DNAJB8 (ENSNVIG00000018251) ENSNVIG00000018247 EEFSEC (ENSNVIG00000018235) RUVBL1 (ENSNVIG00000018223) Felidae ANCESTRAL SPECIES 17 ENSGT00940000154583 ENSGT00500000045038.m.b ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a.a ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b.w ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Panthera ANCESTRAL SPECIES 1 ENSGT00940000155615 ENSGT00940000154583 ENSGT00500000045038.m.b ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a.a ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b.w ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A Panthera_a ANCESTRAL SPECIES ENSGT00940000155615 ENSGT00940000154583 ENSGT00500000045038.m.b ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.y.a.a ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000007704 ENSGT00940000155864.a.b.w ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A lion MODERN SPECIES 2 C3orf20 (ENSPLOG00000002933) CCDC174 (ENSPLOG00000002974) GRIP2 (ENSPLOG00000003035) SLC6A6 (ENSPLOG00000003114) ENSPLOG00000003139 LSM3 (ENSPLOG00000003173) XPC (ENSPLOG00000003191) TMEM43 (ENSPLOG00000003216) ENSPLOG00000003237 WNT7A (ENSPLOG00000003262) FBLN2 (ENSPLOG00000003304) HDAC11 (ENSPLOG00000003423) ENSPLOG00000003482 ACAD9 (ENSPLOG00000003509) CFAP92 (ENSPLOG00000003557) EFCC1 (ENSPLOG00000003589) ##22 GP9 (ENSPLOG00000003607) RAB43 (ENSPLOG00000003618) ISY1 (ENSPLOG00000003627) CNBP (ENSPLOG00000003644) COPG1 (ENSPLOG00000003685) HMCES (ENSPLOG00000003766) H1-10 (ENSPLOG00000003787) ENSPLOG00000003798 ENSPLOG00000003821 RPN1 (ENSPLOG00000003850) GATA2 (ENSPLOG00000003865) DNAJB8 (ENSPLOG00000003879) ENSPLOG00000003882 EEFSEC (ENSPLOG00000003896) RUVBL1 (ENSPLOG00000003920) leopard MODERN SPECIES 135 IQSEC1 (ENSPPRG00000003906) ACAD9 (ENSPPRG00000003828) ENSPPRG00000003629 ENSPPRG00000003622 EFCC1 (ENSPPRG00000003552) ##22 ENSPPRG00000011035 ENSPPRG00000011028 RAB43 (ENSPPRG00000003497) ISY1 (ENSPPRG00000003480) CNBP (ENSPPRG00000003431) COPG1 (ENSPPRG00000003340) HMCES (ENSPPRG00000003160) H1-10 (ENSPPRG00000011017) ENSPPRG00000011010 ENSPPRG00000003104 RPN1 (ENSPPRG00000003007) GATA2 (ENSPPRG00000002963) DNAJB8 (ENSPPRG00000011004) ENSPPRG00000002912 EEFSEC (ENSPPRG00000002846) Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT01030000234553.b.b.d.c.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Primates ANCESTRAL SPECIES 1 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a ENSGT00940000156836 Haplorrhini ANCESTRAL SPECIES 62 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 Simiiformes ANCESTRAL SPECIES 1 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Catarrhini ANCESTRAL SPECIES 2 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Hominoidea ANCESTRAL SPECIES 2 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00910000147060 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00390000007219 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a Hominidae ANCESTRAL SPECIES 2 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00910000147060 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00910000147965 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00910000147060 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Gorilla MODERN SPECIES 16 MGLL (ENSGGOG00000000179) ENSGGOG00000044048 KBTBD12 (ENSGGOG00000025759) SEC61A1 (ENSGGOG00000010507) RUVBL1 (ENSGGOG00000010520) EEFSEC (ENSGGOG00000001445) ENSGGOG00000038952 DNAJB8 (ENSGGOG00000038485) GATA2 (ENSGGOG00000006156) ENSGGOG00000005125 RPN1 (ENSGGOG00000013966) RAB7A (ENSGGOG00000005557) ENSGGOG00000026638 ACAD9 (ENSGGOG00000009603) ENSGGOG00000025242 EFCC1 (ENSGGOG00000005037) ##22 GP9 (ENSGGOG00000012908) RAB43 (ENSGGOG00000027408) ISY1 (ENSGGOG00000038733) CNBP (ENSGGOG00000010085) COPG1 (ENSGGOG00000014201) HMCES (ENSGGOG00000016921) H1-10 (ENSGGOG00000016927) EFCAB12 (ENSGGOG00000026446) MBD4 (ENSGGOG00000010698) IFT122 (ENSGGOG00000010703) RHO (ENSGGOG00000010728) H1-8 (ENSGGOG00000000735) PLXND1 (ENSGGOG00000000736) ENSGGOG00000003969 ENSGGOG00000037304 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00910000147965 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00910000147060 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00520000059425 ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Human MODERN SPECIES 15 TPRA1 (ENSG00000163870) MCM2 (ENSG00000073111) PODXL2 (ENSG00000114631) ABTB1 (ENSG00000114626) MGLL (ENSG00000074416) KBTBD12 (ENSG00000187715) SEC61A1 (ENSG00000058262) RUVBL1 (ENSG00000175792) EEFSEC (ENSG00000132394) DNAJB8 (ENSG00000179407) GATA2 (ENSG00000179348) RPN1 (ENSG00000163902) RAB7A (ENSG00000075785) ACAD9 (ENSG00000177646) CFAP92 (ENSG00000114656) EFCC1 (ENSG00000114654) ##22 GP9 (ENSG00000169704) RAB43 (ENSG00000172780) ISY1-RAB43 (ENSG00000261796) ISY1 (ENSG00000240682) CNBP (ENSG00000169714) COPG1 (ENSG00000181789) HMCES (ENSG00000183624) H1-10 (ENSG00000184897) EFCAB12 (ENSG00000172771) IFT122 (ENSG00000163913) MBD4 (ENSG00000129071) RHO (ENSG00000163914) H1-8 (ENSG00000178804) PLXND1 (ENSG00000004399) TMCC1 (ENSG00000172765) Pan ANCESTRAL SPECIES 2 ENSGT00910000147965 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00910000147060 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00520000059425 ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Chimpanzee MODERN SPECIES 16 ENSPTRG00000049260 KBTBD12 (ENSPTRG00000015350) SEC61A1 (ENSPTRG00000015351) RUVBL1 (ENSPTRG00000015352) EEFSEC (ENSPTRG00000015353) ENSPTRG00000047855 DNAJB8 (ENSPTRG00000030133) GATA2 (ENSPTRG00000015355) ENSPTRG00000015356 RPN1 (ENSPTRG00000015358) ENSPTRG00000052721 RAB7A (ENSPTRG00000015359) ENSPTRG00000049707 ACAD9 (ENSPTRG00000015362) ENSPTRG00000015363 EFCC1 (ENSPTRG00000015366) ##22 GP9 (ENSPTRG00000041466) RAB43 (ENSPTRG00000050264) ISY1 (ENSPTRG00000015367) CNBP (ENSPTRG00000015369) COPG1 (ENSPTRG00000015370) HMCES (ENSPTRG00000015372) H1-10 (ENSPTRG00000015374) EFCAB12 (ENSPTRG00000015376) MBD4 (ENSPTRG00000015377) IFT122 (ENSPTRG00000015378) RHO (ENSPTRG00000015379) H1-8 (ENSPTRG00000015380) PLXND1 (ENSPTRG00000015381) TMCC1 (ENSPTRG00000015382) TRH (ENSPTRG00000015383) Orangutan MODERN SPECIES 16 PODXL2 (ENSPPYG00000013442) ABTB1 (ENSPPYG00000013441) MGLL (ENSPPYG00000013440) KBTBD12 (ENSPPYG00000037884) SEC61A1 (ENSPPYG00000013438) RUVBL1 (ENSPPYG00000013437) EEFSEC (ENSPPYG00000013436) DNAJB8 (ENSPPYG00000013435) GATA2 (ENSPPYG00000013434) RPN1 (ENSPPYG00000013432) ENSPPYG00000013430 RAB7A (ENSPPYG00000013431) ENSPPYG00000039972 ACAD9 (ENSPPYG00000013429) CFAP92 (ENSPPYG00000013428) EFCC1 (ENSPPYG00000013427) ##22 GP9 (ENSPPYG00000013425) ENSPPYG00000038696 RAB43 (ENSPPYG00000038432) ISY1 (ENSPPYG00000013424) CNBP (ENSPPYG00000013423) COPG1 (ENSPPYG00000013422) HMCES (ENSPPYG00000013421) H1-10 (ENSPPYG00000013420) EFCAB12 (ENSPPYG00000013418) MBD4 (ENSPPYG00000013417) IFT122 (ENSPPYG00000013416) RHO (ENSPPYG00000013415) ENSPPYG00000013414 PLXND1 (ENSPPYG00000013413) TMCC1 (ENSPPYG00000013412) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Vervet Monkey MODERN SPECIES 14 MCM2 (ENSCSAG00000008462) PODXL2 (ENSCSAG00000008474) ABTB1 (ENSCSAG00000008534) MGLL (ENSCSAG00000008560) KBTBD12 (ENSCSAG00000008568) ENSCSAG00000018715 SEC61A1 (ENSCSAG00000008579) RUVBL1 (ENSCSAG00000008592) EEFSEC (ENSCSAG00000008599) DNAJB8 (ENSCSAG00000018813) GATA2 (ENSCSAG00000008607) RPN1 (ENSCSAG00000008622) RAB7A (ENSCSAG00000008628) ACAD9 (ENSCSAG00000008707) CFAP92 (ENSCSAG00000008754) EFCC1 (ENSCSAG00000008762) ##22 GP9 (ENSCSAG00000018812) RAB43 (ENSCSAG00000008765) ISY1 (ENSCSAG00000008798) CNBP (ENSCSAG00000008817) COPG1 (ENSCSAG00000008921) HMCES (ENSCSAG00000008979) H1-10 (ENSCSAG00000018811) EFCAB12 (ENSCSAG00000009011) MBD4 (ENSCSAG00000009037) IFT122 (ENSCSAG00000009059) RHO (ENSCSAG00000009088) H1-8 (ENSCSAG00000009112) PLXND1 (ENSCSAG00000009144) TMCC1 (ENSCSAG00000009154) TRH (ENSCSAG00000009163) Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00910000147060 ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Macaca ANCESTRAL SPECIES 5 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00910000147060 ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00390000007219 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Macaca_a ANCESTRAL SPECIES 5 ENSGT00390000016807 ENSGT01050000244824.F ENSGT00730000111323 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000161627.a.b.b.a.b.b.b ##14 ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a Rhesus MODERN SPECIES 11 MCM2 (ENSMMUG00000000158) PODXL2 (ENSMMUG00000000164) ABTB1 (ENSMMUG00000000166) ENSMMUG00000056821 MGLL (ENSMMUG00000000168) KBTBD12 (ENSMMUG00000046638) SEC61A1 (ENSMMUG00000018661) RUVBL1 (ENSMMUG00000018662) EEFSEC (ENSMMUG00000018663) GATA2 (ENSMMUG00000021371) RPN1 (ENSMMUG00000018321) ENSMMUG00000020716 #22 RAB7A (ENSMMUG00000001798) ACAD9 (ENSMMUG00000006338) CFAP92 (ENSMMUG00000006343) EFCC1 (ENSMMUG00000047061) ##22 ENSMMUG00000062320 ##14 GP9 (ENSMMUG00000019799) ISY1 (ENSMMUG00000011580) ENSMMUG00000047632 CNBP (ENSMMUG00000058753) COPG1 (ENSMMUG00000013163) HMCES (ENSMMUG00000013167) H1-10 (ENSMMUG00000043091) ENSMMUG00000063541 ##14 EFCAB12 (ENSMMUG00000012721) MBD4 (ENSMMUG00000012723) ENSMMUG00000062379 IFT122 (ENSMMUG00000012727) RHO (ENSMMUG00000055315) H1-8 (ENSMMUG00000012736) Crab-eating macaque MODERN SPECIES 11 ABTB1 (ENSMFAG00000033156) MGLL (ENSMFAG00000033079) KBTBD12 (ENSMFAG00000007505) SEC61A1 (ENSMFAG00000043634) RUVBL1 (ENSMFAG00000003301) EEFSEC (ENSMFAG00000042128) DNAJB8 (ENSMFAG00000030291) GATA2 (ENSMFAG00000038603) RPN1 (ENSMFAG00000003642) ENSMFAG00000031120 ##22 ENSMFAG00000054493 RAB7A (ENSMFAG00000050771) ENSMFAG00000057913 ACAD9 (ENSMFAG00000045035) CFAP92 (ENSMFAG00000043199) EFCC1 (ENSMFAG00000046117) ##22 ENSMFAG00000064038 ##14 RAB43 (ENSMFAG00000040013) ISY1 (ENSMFAG00000061497) CNBP (ENSMFAG00000030262) COPG1 (ENSMFAG00000031940) HMCES (ENSMFAG00000032291) ENSMFAG00000040136 IFT122 (ENSMFAG00000030257) RHO (ENSMFAG00000004044) ENSMFAG00000017755 ENSMFAG00000056765 PLXND1 (ENSMFAG00000000589) TMCC1 (ENSMFAG00000045092) TRH (ENSMFAG00000042203) RBSN (ENSMFAG00000052478) Pig-tailed macaque MODERN SPECIES 546 SEC61A1 (ENSMNEG00000001390) RUVBL1 (ENSMNEG00000030256) ENSMNEG00000023174 EEFSEC (ENSMNEG00000028574) DNAJB8 (ENSMNEG00000011913) GATA2 (ENSMNEG00000029290) ENSMNEG00000030117 RPN1 (ENSMNEG00000023826) ENSMNEG00000040171 ##22 ENSMNEG00000014307 RAB7A (ENSMNEG00000033473) ENSMNEG00000015696 ACAD9 (ENSMNEG00000040449) ENSMNEG00000031067 ENSMNEG00000029835 EFCC1 (ENSMNEG00000040739) ##22 GP9 (ENSMNEG00000008633) RAB43 (ENSMNEG00000029051) ISY1 (ENSMNEG00000043206) CNBP (ENSMNEG00000028473) COPG1 (ENSMNEG00000033067) HMCES (ENSMNEG00000042145) H1-10 (ENSMNEG00000025518) EFCAB12 (ENSMNEG00000030732) MBD4 (ENSMNEG00000029752) IFT122 (ENSMNEG00000041458) RHO (ENSMNEG00000038092) H1-8 (ENSMNEG00000045142) PLXND1 (ENSMNEG00000036132) TMCC1 (ENSMNEG00000040170) TRH (ENSMNEG00000030919) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00910000147060 ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Olive baboon MODERN SPECIES 11 MGLL (ENSPANG00000018817) KBTBD12 (ENSPANG00000006163) SEC61A1 (ENSPANG00000012256) RUVBL1 (ENSPANG00000004174) ENSPANG00000048574 EEFSEC (ENSPANG00000017041) DNAJB8 (ENSPANG00000001041) GATA2 (ENSPANG00000005346) ENSPANG00000024411 RPN1 (ENSPANG00000007909) ENSPANG00000041869 RAB7A (ENSPANG00000031173) ENSPANG00000033246 ACAD9 (ENSPANG00000018818) CFAP92 (ENSPANG00000013114) EFCC1 (ENSPANG00000024679) ##22 GP9 (ENSPANG00000008215) RAB43 (ENSPANG00000012533) ISY1 (ENSPANG00000004750) CNBP (ENSPANG00000007815) COPG1 (ENSPANG00000018819) HMCES (ENSPANG00000012065) H1-10 (ENSPANG00000018283) MBD4 (ENSPANG00000015047) IFT122 (ENSPANG00000006164) RHO (ENSPANG00000008230) H1-8 (ENSPANG00000017383) PLXND1 (ENSPANG00000005560) TMCC1 (ENSPANG00000022860) TRH (ENSPANG00000009555) RBSN (ENSPANG00000016555) Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00940000156836 ENSGT00390000003721.d.a.c ENSGT00940000153556.A ENSGT00910000147060 ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Sooty mangabey MODERN SPECIES 650 KBTBD12 (ENSCATG00000033209) SEC61A1 (ENSCATG00000030097) RUVBL1 (ENSCATG00000030520) ENSCATG00000005753 EEFSEC (ENSCATG00000019414) DNAJB8 (ENSCATG00000000460) GATA2 (ENSCATG00000017111) ENSCATG00000000229 RPN1 (ENSCATG00000037161) ENSCATG00000001293 ENSCATG00000041773 ENSCATG00000037989 ENSCATG00000039946 ACAD9 (ENSCATG00000038107) ENSCATG00000030214 EFCC1 (ENSCATG00000037868) ##22 GP9 (ENSCATG00000002905) RAB43 (ENSCATG00000038321) ISY1 (ENSCATG00000030672) CNBP (ENSCATG00000020089) COPG1 (ENSCATG00000031185) HMCES (ENSCATG00000040383) H1-10 (ENSCATG00000002340) EFCAB12 (ENSCATG00000038259) MBD4 (ENSCATG00000035211) IFT122 (ENSCATG00000017582) RHO (ENSCATG00000038589) H1-8 (ENSCATG00000040635) PLXND1 (ENSCATG00000041419) TMCC1 (ENSCATG00000017209) TRH (ENSCATG00000030883) Rhinopithecus ANCESTRAL SPECIES 35 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a.c.a ENSGT00940000153556.A ENSGT00940000158170.n ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00910000147229 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b.c ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Black snub-nosed monkey MODERN SPECIES 772 MGLL (ENSRBIG00000041834) KBTBD12 (ENSRBIG00000030050) ENSRBIG00000031893 ENSRBIG00000008581 RUVBL1 (ENSRBIG00000033313) EEFSEC (ENSRBIG00000032635) DNAJB8 (ENSRBIG00000005878) GATA2 (ENSRBIG00000038834) ENSRBIG00000042871 RPN1 (ENSRBIG00000044116) RAB7A (ENSRBIG00000034869) ENSRBIG00000025725 ENSRBIG00000043768 ACAD9 (ENSRBIG00000036154) ENSRBIG00000035587 EFCC1 (ENSRBIG00000036553) ##22 GP9 (ENSRBIG00000010960) RAB43 (ENSRBIG00000038082) ISY1 (ENSRBIG00000028747) CNBP (ENSRBIG00000030361) COPG1 (ENSRBIG00000021306) HMCES (ENSRBIG00000043914) H1-10 (ENSRBIG00000024996) EFCAB12 (ENSRBIG00000015767) MBD4 (ENSRBIG00000027722) IFT122 (ENSRBIG00000038785) RHO (ENSRBIG00000035830) H1-8 (ENSRBIG00000033982) PLXND1 (ENSRBIG00000034816) TMCC1 (ENSRBIG00000032447) ENSRBIG00000043034 Golden snub-nosed monkey MODERN SPECIES 786 ENSRROG00000004134 DNAJB8 (ENSRROG00000009062) GATA2 (ENSRROG00000043007) RPN1 (ENSRROG00000000640) RAB7A (ENSRROG00000032287) ENSRROG00000011523 ENSRROG00000029980 ACAD9 (ENSRROG00000037571) ENSRROG00000045044 EFCC1 (ENSRROG00000044997) ##22 GP9 (ENSRROG00000005417) RAB43 (ENSRROG00000030922) ISY1 (ENSRROG00000032314) CNBP (ENSRROG00000045469) COPG1 (ENSRROG00000031995) HMCES (ENSRROG00000005426) H1-10 (ENSRROG00000006503) Platyrrhini ANCESTRAL SPECIES 18 ENSGT00730000111323 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000003087 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e.a ENSGT00390000016313.a.b.e.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Cebidae ANCESTRAL SPECIES 14 ENSGT00730000111323 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000162567 ENSGT00940000156315 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e.a ENSGT00390000016313.a.b.e.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Marmoset MODERN SPECIES 6 ENSCJAG00000076823 KBTBD12 (ENSCJAG00000005305) SEC61A1 (ENSCJAG00000005358) RUVBL1 (ENSCJAG00000005310) EEFSEC (ENSCJAG00000005387) DNAJB8 (ENSCJAG00000046212) GATA2 (ENSCJAG00000011732) RPN1 (ENSCJAG00000017529) RAB7A (ENSCJAG00000017521) ENSCJAG00000042144 ENSCJAG00000079805 ENSCJAG00000053023 ACAD9 (ENSCJAG00000017490) ENSCJAG00000073312 CFAP92 (ENSCJAG00000017479) EFCC1 (ENSCJAG00000017469) ##22 GP9 (ENSCJAG00000017461) ENSCJAG00000087267 RAB43 (ENSCJAG00000035984) ISY1 (ENSCJAG00000017419) CNBP (ENSCJAG00000017430) ENSCJAG00000083673 COPG1 (ENSCJAG00000017327) HMCES (ENSCJAG00000017396) H1-10 (ENSCJAG00000039596) EFCAB12 (ENSCJAG00000017314) MBD4 (ENSCJAG00000017293) IFT122 (ENSCJAG00000017213) ENSCJAG00000087235 ENSCJAG00000076224 RHO (ENSCJAG00000017195) Cebidae_a ANCESTRAL SPECIES 47 ENSGT00730000111323 ENSGT00390000017131 ENSGT00390000011364 ENSGT00940000156836 ENSGT00390000003721.d.a ENSGT00940000153556.A ENSGT00940000158170 ENSGT00940000156315 ENSGT00390000009630 ENSGT00940000155864.a.b ENSGT00390000007704 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e.a ENSGT00390000016313.a.b.e.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Bolivian squirrel monkey MODERN SPECIES 59 PODXL2 (ENSSBOG00000024042) ABTB1 (ENSSBOG00000020483) MGLL (ENSSBOG00000029617) KBTBD12 (ENSSBOG00000033473) SEC61A1 (ENSSBOG00000032149) RUVBL1 (ENSSBOG00000029245) EEFSEC (ENSSBOG00000031478) ENSSBOG00000015840 GATA2 (ENSSBOG00000033130) RPN1 (ENSSBOG00000033667) RAB7A (ENSSBOG00000014322) ENSSBOG00000012845 ACAD9 (ENSSBOG00000032638) ENSSBOG00000034861 ENSSBOG00000018727 EFCC1 (ENSSBOG00000030437) ##22 RAB43 (ENSSBOG00000021775) ISY1 (ENSSBOG00000029301) CNBP (ENSSBOG00000023735) COPG1 (ENSSBOG00000031709) HMCES (ENSSBOG00000023491) H1-10 (ENSSBOG00000019873) EFCAB12 (ENSSBOG00000024520) MBD4 (ENSSBOG00000016810) IFT122 (ENSSBOG00000035867) RHO (ENSSBOG00000020736) H1-8 (ENSSBOG00000020996) PLXND1 (ENSSBOG00000025455) TMCC1 (ENSSBOG00000032556) TRH (ENSSBOG00000032057) RBSN (ENSSBOG00000029767) Capuchin MODERN SPECIES 457 PODXL2 (ENSCCAG00000029428) ABTB1 (ENSCCAG00000029635) MGLL (ENSCCAG00000032439) KBTBD12 (ENSCCAG00000020516) SEC61A1 (ENSCCAG00000026844) RUVBL1 (ENSCCAG00000030529) EEFSEC (ENSCCAG00000031336) GATA2 (ENSCCAG00000024036) RPN1 (ENSCCAG00000027367) ENSCCAG00000019299 RAB7A (ENSCCAG00000036322) ENSCCAG00000036932 ACAD9 (ENSCCAG00000023234) ENSCCAG00000019645 ENSCCAG00000025316 EFCC1 (ENSCCAG00000012400) ##22 ENSCCAG00000010558 RAB43 (ENSCCAG00000023799) ISY1 (ENSCCAG00000028517) CNBP (ENSCCAG00000034056) ENSCCAG00000002694 ENSCCAG00000002011 HMCES (ENSCCAG00000004553) H1-10 (ENSCCAG00000013241) Mas night monkey MODERN SPECIES 889 ENSANAG00000029519 ENSANAG00000034919 ENSANAG00000016047 ACAD9 (ENSANAG00000035422) ENSANAG00000026095 ENSANAG00000007160 ENSANAG00000003065 EFCC1 (ENSANAG00000031297) ##22 ENSANAG00000025686 RAB43 (ENSANAG00000035515) ISY1 (ENSANAG00000027120) ENSANAG00000030514 H1-10 (ENSANAG00000009590) HMCES (ENSANAG00000032090) Euarchontoglires_A ANCESTRAL SPECIES 30 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Glires ANCESTRAL SPECIES 2 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Lagomorpha ANCESTRAL SPECIES 104 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a ENSGT00940000156836 ENSGT00390000011364 Rabbit MODERN SPECIES 20 ENSOCUG00000029732 ORYCUNV1R1625 (ENSOCUG00000022658) ENSOCUG00000036867 TCAIM (ENSOCUG00000013506) ZNF445 (ENSOCUG00000011175) ENSOCUG00000037555 ENSOCUG00000004941 ENSOCUG00000035363 ENSOCUG00000003123 ENSOCUG00000030022 ZNF660 (ENSOCUG00000028986) ZNF197 (ENSOCUG00000029675) ZNF35 (ENSOCUG00000004757) ACAD9 (ENSOCUG00000011635) CFAP92 (ENSOCUG00000011218) EFCC1 (ENSOCUG00000022659) ##22 GP9 (ENSOCUG00000026359) ENSOCUG00000020939 ISY1 (ENSOCUG00000003923) ENSOCUG00000008696 ENSOCUG00000009170 COPG1 (ENSOCUG00000005970) HMCES (ENSOCUG00000005983) ENSOCUG00000001645 RPN1 (ENSOCUG00000008171) ENSOCUG00000037243 DNAJB8 (ENSOCUG00000026352) EEFSEC (ENSOCUG00000016517) RUVBL1 (ENSOCUG00000016510) SEC61A1 (ENSOCUG00000016501) KBTBD12 (ENSOCUG00000016494) Pika MODERN SPECIES 3274 ENSOPRG00000007271 ZNF35 (ENSOPRG00000015405) ENSOPRG00000018670 ##22 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Rodentia_A ANCESTRAL SPECIES 34 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Sciuridae ANCESTRAL SPECIES 58 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Marmotini ANCESTRAL SPECIES 93 ENSGT00940000157312.i ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315.k ENSGT00940000156315.l ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a.a Marmotini_b ANCESTRAL SPECIES 169 ENSGT00940000157312.i ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315.k ENSGT00940000156315.l ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a.a Arctic ground squirrel MODERN SPECIES 473 ACAD9 (ENSUPAG00010004336) CFAP92 (ENSUPAG00010004363) EFCC1 (ENSUPAG00010004401) ##22 GP9 (ENSUPAG00010004409) RAB43 (ENSUPAG00010004411) ISY1 (ENSUPAG00010004419) CNBP (ENSUPAG00010004475) COPG1 (ENSUPAG00010004499) H1-10 (ENSUPAG00010004837) RAB7A (ENSUPAG00010004842) RPN1 (ENSUPAG00010004856) GATA2 (ENSUPAG00010004865) DNAJB8 (ENSUPAG00010004873) ENSUPAG00010004878 EEFSEC (ENSUPAG00010004881) RUVBL1 (ENSUPAG00010004889) ENSUPAG00010004903 KBTBD12 (ENSUPAG00010004923) Squirrel MODERN SPECIES 398 ACAD9 (ENSSTOG00000012078) EFCC1 (ENSSTOG00000022244) ##22 RAB43 (ENSSTOG00000024799) ISY1 (ENSSTOG00000024769) CNBP (ENSSTOG00000000173) COPG1 (ENSSTOG00000003424) HMCES (ENSSTOG00000030763) RAB7A (ENSSTOG00000028487) RPN1 (ENSSTOG00000004679) GATA2 (ENSSTOG00000006138) DNAJB8 (ENSSTOG00000026698) EEFSEC (ENSSTOG00000019802) RUVBL1 (ENSSTOG00000004659) SEC61A1 (ENSSTOG00000002214) ENSSTOG00000020065 MGLL (ENSSTOG00000023185) ABTB1 (ENSSTOG00000021906) Eurasian red squirrel MODERN SPECIES 10 ENSSVLG00005011437 ENSSVLG00005011591 ACAD9 (ENSSVLG00005011638) CFAP92 (ENSSVLG00005011859) EFCC1 (ENSSVLG00005012080) ##22 GP9 (ENSSVLG00005012207) RAB43 (ENSSVLG00005012224) ISY1 (ENSSVLG00005012270) ENSSVLG00005012311 COPG1 (ENSSVLG00005012487) HMCES (ENSSVLG00005012539) H1-10 (ENSSVLG00005012682) RAB7A (ENSSVLG00005012710) RPN1 (ENSSVLG00005012900) GATA2 (ENSSVLG00005013037) DNAJB8 (ENSSVLG00005013080) ENSSVLG00005013112 EEFSEC (ENSSVLG00005013205) RUVBL1 (ENSSVLG00005013318) SEC61A1 (ENSSVLG00005013613) Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00940000153424.a.a.d ENSGT00390000017697.a ENSGT00940000155889 ENSGT00390000001280.a ENSGT00940000158007 ENSGT00940000155628 ENSGT00510000048252 ENSGT00390000005300 ENSGT00390000008748.b ENSGT00940000157725 ENSGT00940000158086 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00940000157312.g ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00390000007857 ENSGT00390000017828 ENSGT00390000010409 ENSGT00940000160167 ENSGT00940000161629 ENSGT00390000008092.b ENSGT00390000017392 ENSGT00390000017625 ENSGT00390000008152.B.b ENSGT00950000183129.a ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00940000153424.a.a.c.b ENSGT00390000017697.a ENSGT00940000155889 ENSGT00390000001280.a ENSGT00940000158007 ENSGT00940000155628 ENSGT00510000048252 ENSGT00390000005300 ENSGT00390000008748.b ENSGT00940000157725 ENSGT00940000158086 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00940000157312.g ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00390000007857 ENSGT00390000017828 ENSGT00390000010409 ENSGT00940000160167 ENSGT00940000161629 ENSGT00390000008092.b ENSGT00390000017392 ENSGT00390000017625 ENSGT00390000008152.B.b ENSGT00950000183129.a ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a Guinea pig MODERN SPECIES 155 ADAM10 (ENSCPOG00000010516) LIPC (ENSCPOG00000003790) AQP9 (ENSCPOG00000036908) ALDH1A2 (ENSCPOG00000003149) POLR2M (ENSCPOG00000039114) MYZAP (ENSCPOG00000009159) CGNL1 (ENSCPOG00000026550) TCF12 (ENSCPOG00000009153) ZNF280D (ENSCPOG00000014273) MNS1 (ENSCPOG00000009030) TEX9 (ENSCPOG00000007244) ENSCPOG00000031208 ENSCPOG00000019560 EFCC1 (ENSCPOG00000021193) ##22 GP9 (ENSCPOG00000024986) SPG21 (ENSCPOG00000012234) MTFMT (ENSCPOG00000012242) Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00940000153424.a.a.c.b ENSGT00390000017697.a ENSGT00940000155889 ENSGT00390000001280.a ENSGT00940000158007 ENSGT00940000155628 ENSGT00510000048252 ENSGT00390000005300 ENSGT00390000008748.b ENSGT00940000157725 ENSGT00940000158086 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00940000157312.g ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00390000007857 ENSGT00390000017828 ENSGT00390000010409 ENSGT00940000160167 ENSGT00940000161629 ENSGT00390000008092.b ENSGT00390000017392 ENSGT00390000017625 ENSGT00390000008152.B.b ENSGT00950000183129.a ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a Degu MODERN SPECIES 67 CIAO2A (ENSODEG00000017473) SNX1 (ENSODEG00000016535) SNX22 (ENSODEG00000016526) PPIB (ENSODEG00000016713) CSNK1G1 (ENSODEG00000016448) PCLAF (ENSODEG00000016992) ENSODEG00000016410 TRIP4 (ENSODEG00000016494) ZNF609 (ENSODEG00000016415) Oaz2 (ENSODEG00000016846) RBPMS2 (ENSODEG00000016172) PIF1 (ENSODEG00000016408) PLEKHO2 (ENSODEG00000016749) ANKDD1A (ENSODEG00000016476) ACAD9 (ENSODEG00000016388) EFCC1 (ENSODEG00000016555) ##22 SPG21 (ENSODEG00000016267) ENSODEG00000017695 SLC51B (ENSODEG00000016552) RASL12 (ENSODEG00000016297) KBTBD13 (ENSODEG00000020550) ENSODEG00000016276 PDCD7 (ENSODEG00000016758) ENSODEG00000016607 CLPX (ENSODEG00000016361) CILP (ENSODEG00000016085) ENSODEG00000020368 PARP16 (ENSODEG00000016601) IGDCC3 (ENSODEG00000016285) IGDCC4 (ENSODEG00000016455) DPP8 (ENSODEG00000016356) Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Myomorpha ANCESTRAL SPECIES 36 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Lesser Egyptian jerboa MODERN SPECIES 116 Slc25a48 (ENSJJAG00000022548) Il9 (ENSJJAG00000001064) Fbxl21 (ENSJJAG00000010608) Lect2 (ENSJJAG00000012881) Tgfbi (ENSJJAG00000014270) Smad5 (ENSJJAG00000019065) Trpc7 (ENSJJAG00000002420) Spock1 (ENSJJAG00000009570) Klhl3 (ENSJJAG00000021717) Hnrnpa0 (ENSJJAG00000006954) Npy6r (ENSJJAG00000000646) Myot (ENSJJAG00000021663) Dcp2 (ENSJJAG00000010518) Mcc (ENSJJAG00000014471) Ythdc2 (ENSJJAG00000017908) ENSJJAG00000003627 ##22 Rab43 (ENSJJAG00000006469) Isy1 (ENSJJAG00000009635) ENSJJAG00000010709 Copg1 (ENSJJAG00000021522) Hmces (ENSJJAG00000013891) Rab7 (ENSJJAG00000014204) Rpn1 (ENSJJAG00000016770) Gata2 (ENSJJAG00000017283) Dnajb8 (ENSJJAG00000014628) ENSJJAG00000020703 Ruvbl1 (ENSJJAG00000022489) Sec61a1 (ENSJJAG00000000357) Kbtbd12 (ENSJJAG00000003832) ENSJJAG00000014292 Mgll (ENSJJAG00000017428) Muroidea ANCESTRAL SPECIES 37 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Muroidea_A ANCESTRAL SPECIES 4 ENSGT00730000111237 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Cricetidae ANCESTRAL SPECIES 3 ENSGT00730000111237 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00730000111237 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000007464 Gmcl1 (ENSPEMG00000013985) Anxa4 (ENSPEMG00000016652) Aak1 (ENSPEMG00000015474) Nfu1 (ENSPEMG00000005361) Gfpt1 (ENSPEMG00000018838) Antxr1 (ENSPEMG00000000558) Gkn1 (ENSPEMG00000019090) Gkn2 (ENSPEMG00000005008) Gkn3 (ENSPEMG00000018616) Bmp10 (ENSPEMG00000030517) Arhgap25 (ENSPEMG00000008247) Prokr1 (ENSPEMG00000016141) Aplf (ENSPEMG00000031100) Cfap92 (ENSPEMG00000030599) Efcc1 (ENSPEMG00000007315) ##22 ENSPEMG00000028759 Gp9 (ENSPEMG00000014722) Rab43 (ENSPEMG00000001914) Isy1 (ENSPEMG00000005390) Cnbp (ENSPEMG00000024256) Copg1 (ENSPEMG00000012916) Hmces (ENSPEMG00000010791) H1f10 (ENSPEMG00000024744) Rab7 (ENSPEMG00000010928) Rpn1 (ENSPEMG00000009660) Gata2 (ENSPEMG00000014601) Dnajb8 (ENSPEMG00000009473) Eefsec (ENSPEMG00000013677) Ruvbl1 (ENSPEMG00000012619) Sec61a1 (ENSPEMG00000010859) Prairie vole MODERN SPECIES 84 Gmcl1 (ENSMOCG00000020859) Anxa4 (ENSMOCG00000011214) Aak1 (ENSMOCG00000019688) ENSMOCG00000022055 Nfu1 (ENSMOCG00000022541) ENSMOCG00000018837 Gfpt1 (ENSMOCG00000003763) Antxr1 (ENSMOCG00000010995) Gkn1 (ENSMOCG00000012238) Gkn2 (ENSMOCG00000013727) Gkn3 (ENSMOCG00000001044) Bmp10 (ENSMOCG00000008010) Arhgap25 (ENSMOCG00000014806) Prokr1 (ENSMOCG00000016639) Aplf (ENSMOCG00000000228) Efcc1 (ENSMOCG00000015748) ##22 Gp9 (ENSMOCG00000005065) Rab43 (ENSMOCG00000013901) Isy1 (ENSMOCG00000000472) Cnbp (ENSMOCG00000002044) Copg1 (ENSMOCG00000004622) Hmces (ENSMOCG00000016378) ENSMOCG00000002760 Rpn1 (ENSMOCG00000019555) Gata2 (ENSMOCG00000010158) Dnajb8 (ENSMOCG00000009527) ENSMOCG00000013516 Eefsec (ENSMOCG00000017748) Ruvbl1 (ENSMOCG00000020711) Sec61a1 (ENSMOCG00000012823) Kbtbd12 (ENSMOCG00000010634) Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000159446 ENSGT00730000111237 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00900000143259 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Chinese hamster chok1gshd MODERN SPECIES 335 Antxr1 (ENSCGRG00001019000) Gkn1 (ENSCGRG00001016533) Gkn2 (ENSCGRG00001016083) ENSCGRG00001015594 Gkn3 (ENSCGRG00001015053) Bmp10 (ENSCGRG00001014783) Arhgap25 (ENSCGRG00001014196) Prokr1 (ENSCGRG00001013215) Aplf (ENSCGRG00001011911) Efcc1 (ENSCGRG00001009634) ##22 Gp9 (ENSCGRG00001015172) Rab43 (ENSCGRG00001009520) Isy1 (ENSCGRG00001003415) ENSCGRG00001000923 Copg1 (ENSCGRG00001023044) Hmces (ENSCGRG00001021867) H1f10 (ENSCGRG00001016043) Rab7 (ENSCGRG00001021807) Rpn1 (ENSCGRG00001020104) Gata2 (ENSCGRG00001019672) Dnajb8 (ENSCGRG00001014725) ENSCGRG00001019550 Eefsec (ENSCGRG00001018089) Ruvbl1 (ENSCGRG00001017058) Sec61a1 (ENSCGRG00001016511) Golden Hamster MODERN SPECIES 643 ENSMAUG00000021913 Gmcl1 (ENSMAUG00000018741) Anxa4 (ENSMAUG00000009700) Aak1 (ENSMAUG00000013799) ENSMAUG00000018934 Nfu1 (ENSMAUG00000012605) Gfpt1 (ENSMAUG00000003849) Antxr1 (ENSMAUG00000019142) Gkn1 (ENSMAUG00000001209) Gkn2 (ENSMAUG00000015716) Gkn3 (ENSMAUG00000006560) Bmp10 (ENSMAUG00000020599) Arhgap25 (ENSMAUG00000004408) Prokr1 (ENSMAUG00000001970) ENSMAUG00000021133 Efcc1 (ENSMAUG00000020888) ##22 Gp9 (ENSMAUG00000009649) Rab43 (ENSMAUG00000020185) Isy1 (ENSMAUG00000008793) ENSMAUG00000011845 Hmces (ENSMAUG00000007703) H1f10 (ENSMAUG00000010028) Rpn1 (ENSMAUG00000022244) Gata2 (ENSMAUG00000007355) Dnajb8 (ENSMAUG00000009689) ENSMAUG00000021823 Eefsec (ENSMAUG00000011197) Ruvbl1 (ENSMAUG00000001153) Sec61a1 (ENSMAUG00000003472) Kbtbd12 (ENSMAUG00000017044) Mgll (ENSMAUG00000006292) Murinae ANCESTRAL SPECIES 4 ENSGT00730000111237 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00900000143259 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a Mus ANCESTRAL SPECIES 12 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00860000135644 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00860000135618 ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00900000143259 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A Mus_A ANCESTRAL SPECIES 7 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00860000135644 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00860000135618 ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00900000143259 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A.g.a Mus_B ANCESTRAL SPECIES 15 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296.s ENSGT00940000158488 ENSGT00860000135644 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00860000135618 ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00900000143259 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A.g.a Mouse MODERN SPECIES 15 Snrnp27 (ENSMUSG00000001158) Gmcl1 (ENSMUSG00000001157) Anxa4 (ENSMUSG00000029994) Aak1 (ENSMUSG00000057230) Nfu1 (ENSMUSG00000029993) Gfpt1 (ENSMUSG00000029992) Antxr1 (ENSMUSG00000033420) Gkn1 (ENSMUSG00000030050) Gkn2 (ENSMUSG00000030049) Gkn3 (ENSMUSG00000030048) Bmp10 (ENSMUSG00000030046) Arhgap25 (ENSMUSG00000030047) Prokr1 (ENSMUSG00000049409) Aplf (ENSMUSG00000030051) Cfap92 (ENSMUSG00000089997) Efcc1 (ENSMUSG00000068263) ##22 Gp9 (ENSMUSG00000030054) Rab43 (ENSMUSG00000030055) Gm45140 (ENSMUSG00000107928) Isy1 (ENSMUSG00000030056) Cnbp (ENSMUSG00000030057) Copg1 (ENSMUSG00000030058) Hmces (ENSMUSG00000030060) H1f10 (ENSMUSG00000044927) Rab7 (ENSMUSG00000079477) Rpn1 (ENSMUSG00000030062) Gata2 (ENSMUSG00000015053) Dnajb8 (ENSMUSG00000048206) Eefsec (ENSMUSG00000033216) Ruvbl1 (ENSMUSG00000030079) Sec61a1 (ENSMUSG00000030082) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000156185 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296.s ENSGT00940000158488 ENSGT00860000135644 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00860000135618 ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b.s ENSGT00390000009630 ENSGT00940000156315 ENSGT00900000143259 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A.g.a spretus MODERN SPECIES 15 Snrnp27 (MGP_SPRETEiJ_G0029612) Gmcl1 (MGP_SPRETEiJ_G0029613) Anxa4 (MGP_SPRETEiJ_G0029614) Aak1 (MGP_SPRETEiJ_G0029615) Nfu1 (MGP_SPRETEiJ_G0029616) Gfpt1 (MGP_SPRETEiJ_G0029617) MGP_SPRETEiJ_G0029618 Antxr1 (MGP_SPRETEiJ_G0029619) Gkn1 (MGP_SPRETEiJ_G0029620) Gkn2 (MGP_SPRETEiJ_G0029621) Gkn3 (MGP_SPRETEiJ_G0029622) Bmp10 (MGP_SPRETEiJ_G0029623) Arhgap25 (MGP_SPRETEiJ_G0029624) Prokr1 (MGP_SPRETEiJ_G0029625) Aplf (MGP_SPRETEiJ_G0029626) Efcc1 (MGP_SPRETEiJ_G0029627) ##22 Gp9 (MGP_SPRETEiJ_G0029628) Rab43 (MGP_SPRETEiJ_G0029629) MGP_SPRETEiJ_G0029630 Isy1 (MGP_SPRETEiJ_G0029631) Cnbp (MGP_SPRETEiJ_G0029632) Copg1 (MGP_SPRETEiJ_G0029633) Hmces (MGP_SPRETEiJ_G0029634) MGP_SPRETEiJ_G0029635 Rab7 (MGP_SPRETEiJ_G0029636) Rpn1 (MGP_SPRETEiJ_G0029637) Gata2 (MGP_SPRETEiJ_G0029638) Dnajb8 (MGP_SPRETEiJ_G0029639) Eefsec (MGP_SPRETEiJ_G0029640) Ruvbl1 (MGP_SPRETEiJ_G0029641) Sec61a1 (MGP_SPRETEiJ_G0029642) Steppe mouse MODERN SPECIES 3245 Gmcl1 (ENSMSIG00000014854) Anxa4 (ENSMSIG00000014770) Aak1 (ENSMSIG00000014567) Nfu1 (ENSMSIG00000014498) Gfpt1 (ENSMSIG00000014430) Antxr1 (ENSMSIG00000014330) Gkn1 (ENSMSIG00000014321) Gkn2 (ENSMSIG00000014305) Gkn3 (ENSMSIG00000014288) Bmp10 (ENSMSIG00000014277) Arhgap25 (ENSMSIG00000014180) Prokr1 (ENSMSIG00000014170) Aplf (ENSMSIG00000014118) ENSMSIG00000014100 Cfap92 (ENSMSIG00000014040) Efcc1 (ENSMSIG00000013979) ##22 Gp9 (ENSMSIG00000013971) Rab43 (ENSMSIG00000013941) Isy1 (ENSMSIG00000013902) Cnbp (ENSMSIG00000013887) Copg1 (ENSMSIG00000013836) Hmces (ENSMSIG00000013812) Rab7 (ENSMSIG00000013617) Rpn1 (ENSMSIG00000013555) Gata2 (ENSMSIG00000013519) ENSMSIG00000013506 Dnajb8 (ENSMSIG00000013500) Eefsec (ENSMSIG00000013446) Ruvbl1 (ENSMSIG00000013395) Sec61a1 (ENSMSIG00000013368) Kbtbd12 (ENSMSIG00000013327) Shrew mouse MODERN SPECIES 11 MGP_PahariEiJ_G0022338 Gmcl1 (MGP_PahariEiJ_G0022339) Anxa4 (MGP_PahariEiJ_G0022340) Aak1 (MGP_PahariEiJ_G0022341) Nfu1 (MGP_PahariEiJ_G0022342) Gfpt1 (MGP_PahariEiJ_G0022343) MGP_PahariEiJ_G0022344 MGP_PahariEiJ_G0022345 Gkn1 (MGP_PahariEiJ_G0022346) Gkn2 (MGP_PahariEiJ_G0022347) Gkn3 (MGP_PahariEiJ_G0022348) Bmp10 (MGP_PahariEiJ_G0022349) Arhgap25 (MGP_PahariEiJ_G0022350) Prokr1 (MGP_PahariEiJ_G0022351) Aplf (MGP_PahariEiJ_G0022352) Efcc1 (MGP_PahariEiJ_G0022353) ##22 Gp9 (MGP_PahariEiJ_G0022354) Rab43 (MGP_PahariEiJ_G0022355) MGP_PahariEiJ_G0022356 Isy1 (MGP_PahariEiJ_G0022357) Cnbp (MGP_PahariEiJ_G0022358) Copg1 (MGP_PahariEiJ_G0022359) Hmces (MGP_PahariEiJ_G0022360) MGP_PahariEiJ_G0022361 Rab7 (MGP_PahariEiJ_G0022362) Rpn1 (MGP_PahariEiJ_G0022363) Gata2 (MGP_PahariEiJ_G0022364) Dnajb8 (MGP_PahariEiJ_G0022365) Eefsec (MGP_PahariEiJ_G0022366) Ruvbl1 (MGP_PahariEiJ_G0022367) Sec61a1 (MGP_PahariEiJ_G0022368) Rat MODERN SPECIES 14 Snrnp27 (ENSRNOG00000017838) Anxa4 (ENSRNOG00000018159) Aak1 (ENSRNOG00000018317) Rpl22 (ENSRNOG00000028747) Nfu1 (ENSRNOG00000018410) Gfpt1 (ENSRNOG00000018507) Antxr1 (ENSRNOG00000008678) Gkn1 (ENSRNOG00000008838) Gkn2 (ENSRNOG00000009256) Gkn3 (ENSRNOG00000037782) Bmp10 (ENSRNOG00000009316) Arhgap25 (ENSRNOG00000009347) Prokr1 (ENSRNOG00000009556) Aplf (ENSRNOG00000043059) Cfap92 (ENSRNOG00000031408) Efcc1 (ENSRNOG00000009787) ##22 Gp9 (ENSRNOG00000010015) Rab43 (ENSRNOG00000037768) Isy1 (ENSRNOG00000010021) Cnbp (ENSRNOG00000010239) Hmces (ENSRNOG00000010474) H1f10 (ENSRNOG00000027722) Rab7a (ENSRNOG00000012247) Rpn1 (ENSRNOG00000046345) ENSRNOG00000070501 Gata2 (ENSRNOG00000012347) Dnajb8 (ENSRNOG00000034088) Eefsec (ENSRNOG00000012954) Ruvbl1 (ENSRNOG00000013195) LOC685085 (ENSRNOG00000062325) Sec61a1 (ENSRNOG00000013743) Upper Galilee mountains blind mole rat MODERN SPECIES 613 Efcc1 (ENSNGAG00000016217) ##22 Gp9 (ENSNGAG00000023950) Rab43 (ENSNGAG00000008666) Isy1 (ENSNGAG00000015207) Cnbp (ENSNGAG00000005084) Copg1 (ENSNGAG00000021624) Hmces (ENSNGAG00000023995) Rab7 (ENSNGAG00000005194) ENSNGAG00000024318 Gata2 (ENSNGAG00000001268) Dnajb8 (ENSNGAG00000010629) ENSNGAG00000023278 Ruvbl1 (ENSNGAG00000001573) Sec61a1 (ENSNGAG00000021635) ENSNGAG00000023399 Mgll (ENSNGAG00000013544) Marsupialia ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00950000183014.f.b.a.b ##22 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a ENSGT00940000156836 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00940000158892.b ENSGT00940000157161.b ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ##22 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00390000016313.a.b ENSGT00390000018439 ENSGT00730000111536 ENSGT00940000155864.a.b ENSGT00390000009630 ENSGT00940000156315 ENSGT00940000162567 ENSGT00940000158170 ENSGT00940000153556.A ENSGT00390000003721.d.a ENSGT00940000156836 Common wonbat MODERN SPECIES 1012 ENSVURG00010017412 ENSVURG00010016806 ENSVURG00010016753 ##22 ENSVURG00010016748 RAB43 (ENSVURG00010016742) ISY1 (ENSVURG00010016735) CNBP (ENSVURG00010016723) COPG1 (ENSVURG00010016660) HMCES (ENSVURG00010016642) ENSVURG00010016629 ENSVURG00010016622 RAB7A (ENSVURG00010016611) RPN1 (ENSVURG00010016597) GATA2 (ENSVURG00010016576) DNAJB8 (ENSVURG00010016573) ENSVURG00010016566 EEFSEC (ENSVURG00010016493) RUVBL1 (ENSVURG00010016464) Gnathostomata ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Theria ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Lagomorpha ANCESTRAL SPECIES 389 ENSGT00950000183014.f.b.b ##22 ENSGT00940000153456.a #23 ENSGT00940000162472 #24 ENSGT00950000183140.a.a.m.a.b #25 Pika MODERN SPECIES 5454 ENSOPRG00000016737 ##22 NAPRT (ENSOPRG00000016712) #23 ENSOPRG00000016704 #24 GSDMD (ENSOPRG00000016695) #25 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183014.f.b.b ##22 Neopterygii DUPLICATION Neopterygii DUPLICATION Neopterygii ANCESTRAL SPECIES 296 ENSGT00390000004859 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681 #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00940000153456.a #23 ENSGT00940000164676 ENSGT00940000153837.a.a #27 ENSGT00940000162747 ENSGT00940000161068 #26 Spotted gar MODERN SPECIES 675 ssrp1a (ENSLOCG00000008342) ENSLOCG00000008356 ENSLOCG00000008366 LRRC24 (ENSLOCG00000008376) ENSLOCG00000008387 ENSLOCG00000008396 ENSLOCG00000008408 ENSLOCG00000008417 ENSLOCG00000008428 them6 (ENSLOCG00000008438) C8orf82 (ENSLOCG00000008450) ARHGAP39 (ENSLOCG00000008461) gfus.1 (ENSLOCG00000008481) #19 bmb (ENSLOCG00000008496) pycr3 (ENSLOCG00000008510) #20 EEF1D (ENSLOCG00000008527) ##22 ENSLOCG00000008541 ENSLOCG00000008578 RHPN1 (ENSLOCG00000008592) #27 mafaa (ENSLOCG00000018124) ZC3H3 (ENSLOCG00000008621) #26 ENSLOCG00000008631 ENSLOCG00000008642 ENSLOCG00000008656 ENSLOCG00000008668 aoc1 (ENSLOCG00000008713) kcnh2a (ENSLOCG00000008725) ENSLOCG00000008738 ENSLOCG00000008746 ENSLOCG00000008758 ENSLOCG00000008765 Osteoglossocephalai ANCESTRAL SPECIES 301 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00940000153456.a #23 ENSGT00940000164676 ENSGT00940000153837.a.a #27 ENSGT00940000162747 ENSGT00940000161068 #26 ENSGT00940000164912 ENSGT00940000166873 ENSGT00940000157362.d Osteoglossiformes ANCESTRAL SPECIES 560 ENSGT00390000003161.j ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00390000004859 ENSGT00940000160141.a Asian bonytongue MODERN SPECIES ADAMTSL2 (ENSSFOG00015007117) FAM163B (ENSSFOG00015025811) ENSSFOG00015007097 ENSSFOG00015007079 ptrh1 (ENSSFOG00015007053) cfap157 (ENSSFOG00015007039) tor2a (ENSSFOG00015027795) sh2d3cb (ENSSFOG00015007015) ENSSFOG00015006972 GPR21 (ENSSFOG00015006937) zbtb26 (ENSSFOG00015006928) krt1-c5 (ENSSFOG00015006903) ndufa8 (ENSSFOG00015006890) LHX6 (ENSSFOG00015006864) ARHGAP39 (ENSSFOG00015006826) EEF1D (ENSSFOG00015006740) ##22 THEM6 (ENSSFOG00015031535) THEM6 (ENSSFOG00015006698) LRRC24 (ENSSFOG00015006665) ENSSFOG00015030581 ENSSFOG00015006638 ENSSFOG00015029379 ENSSFOG00015006650 ENSSFOG00015028367 INSIG2 (ENSSFOG00015028296) ccdc93 (ENSSFOG00015024988) ddx18 (ENSSFOG00015029658) ENSSFOG00015022573 ENSSFOG00015022612 actr3 (ENSSFOG00015022647) SLC35F5 (ENSSFOG00015022658) P. kingsleyae MODERN SPECIES 15 mafaa (ENSPKIG00000001916) ghrhra (ENSPKIG00000001952) adcyap1r1a (ENSPKIG00000002002) ENSPKIG00000002031 FYCO1 (ENSPKIG00000002060) ENSPKIG00000002113 ENSPKIG00000002125 ENSPKIG00000002137 ENSPKIG00000002146 neurod6b (ENSPKIG00000002159) ENSPKIG00000002183 vim (ENSPKIG00000002252) ENSPKIG00000002279 EEF1D (ENSPKIG00000002308) ##22 them6 (ENSPKIG00000002358) LRRC24 (ENSPKIG00000002373) anxa13l (ENSPKIG00000002403) GPR158 (ENSPKIG00000002439) prtfdc1b (ENSPKIG00000002475) ARHGAP21 (ENSPKIG00000002595) dpp6b (ENSPKIG00000002726) ENSPKIG00000002828 ENSPKIG00000002846 ENSPKIG00000002876 PRKAG2 (ENSPKIG00000002910) BCL2 (ENSPKIG00000002953) kdsr (ENSPKIG00000002968) vps4b (ENSPKIG00000002995) ENSPKIG00000003029 Clupeocephala ANCESTRAL SPECIES 333 ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000164676 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00390000004681.b #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 Euteleosteomorpha ANCESTRAL SPECIES 151 ENSGT00390000003161 ENSGT00390000004681.a.a #19 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT01060000252363 ENSGT00940000155265.b.b ENSGT00940000157362.d ENSGT00940000166873 ENSGT00940000164912 ENSGT00940000161068 #26 ENSGT00940000162747 ENSGT00940000153837.a.a #27 ENSGT00940000164676 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00950000183102.A.b.a ENSGT00940000158137.c.b Acanthomorphata ANCESTRAL SPECIES 21 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 Pinecone sodierfish MODERN SPECIES 18 SLC22A23 (ENSMMDG00005014331) ENSMMDG00005014335 BPHL (ENSMMDG00005014337) DUSP22 (ENSMMDG00005014340) ENSMMDG00005014344 exoc2 (ENSMMDG00005014357) foxq1b (ENSMMDG00005014444) ENSMMDG00005014447 foxc1b (ENSMMDG00005014449) gmds (ENSMMDG00005014457) MYLK4 (ENSMMDG00005014524) serpinb1 (ENSMMDG00005014528) GFUS (ENSMMDG00005014534) #19 bmb (ENSMMDG00005014575) pycr3 (ENSMMDG00005014576) #20 ENSMMDG00005014580 ##22 ENSMMDG00005014656 orc1 (ENSMMDG00005014662) prpf38a (ENSMMDG00005014677) ifit15 (ENSMMDG00005014678) pomgnt1 (ENSMMDG00005014683) TSPAN1 (ENSMMDG00005014716) PIK3R3 (ENSMMDG00005014769) MAST2 (ENSMMDG00005015365) ENSMMDG00005015432 prrx1b (ENSMMDG00005015436) gorab (ENSMMDG00005015441) ntmt2 (ENSMMDG00005015445) kifap3a (ENSMMDG00005015465) niban1a (ENSMMDG00005015756) TRMT1L (ENSMMDG00005000167) Percomorphaceae ANCESTRAL SPECIES 52 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 Tiger tail seahorse MODERN SPECIES 65 BPHL (ENSHCOG00000008754) ENSHCOG00000008786 exoc2 (ENSHCOG00000008869) foxq1b (ENSHCOG00000008887) ENSHCOG00000008894 foxc1b (ENSHCOG00000008915) gmds (ENSHCOG00000008941) MYLK4 (ENSHCOG00000008962) serpinb1 (ENSHCOG00000008969) ENSHCOG00000008974 rad23ab (ENSHCOG00000008982) EPS15L1 (ENSHCOG00000009026) gfus.1 (ENSHCOG00000009035) #19 bmb (ENSHCOG00000009047) pycr3 (ENSHCOG00000009058) #20 ENSHCOG00000009070 ##22 naprt (ENSHCOG00000009077) #23 ENSHCOG00000009087 ENSHCOG00000009206 ADCYAP1R1 (ENSHCOG00000009351) ENSHCOG00000009385 aspm (ENSHCOG00000009448) depdc1a (ENSHCOG00000009576) rpe65b (ENSHCOG00000009617) si:ch211-198n5.11 (ENSHCOG00000009855) fnbp1l (ENSHCOG00000009923) bcar3 (ENSHCOG00000009968) hps3 (ENSHCOG00000010024) ENSHCOG00000000316 ttc14 (ENSHCOG00000010117) ENSHCOG00000010144 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000164616 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000164616 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000164616 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Carangaria ANCESTRAL SPECIES 7 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000164616 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Carangaria_A ANCESTRAL SPECIES 3 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000164616 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Seriola ANCESTRAL SPECIES ENSGT00940000157362.d ENSGT01030000234528.B.b.b.bb.a ENSGT00940000155265.b.b.b ENSGT00530000063646.a ENSGT00940000154149.b.a.g.b ENSGT00390000003574.a ENSGT00390000008371.a ENSGT00390000014886 ENSGT00940000159466 ENSGT01100000263594.b ENSGT00950000183190.a.a.b.c.b ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b Greater amberjack MODERN SPECIES 73 niban1a (ENSSDUG00000021794) kifap3a (ENSSDUG00000021766) ntmt2 (ENSSDUG00000021747) gorab (ENSSDUG00000021741) prrx1b (ENSSDUG00000021734) ENSSDUG00000021730 ENSSDUG00000021725 ENSSDUG00000021712 ENSSDUG00000021705 ENSSDUG00000021696 SERPINB1 (ENSSDUG00000021682) GFUS (ENSSDUG00000021667) #19 GFUS (ENSSDUG00000021654) #19 bmb (ENSSDUG00000021603) pycr3 (ENSSDUG00000021591) #20 ENSSDUG00000021580 ##22 ENSSDUG00000021572 NOS1AP (ENSSDUG00000021563) ENSSDUG00000021560 ENSSDUG00000021518 rgs4 (ENSSDUG00000021499) rgs5a (ENSSDUG00000021486) rgs16 (ENSSDUG00000021481) rgs8 (ENSSDUG00000021474) ENSSDUG00000021413 brinp3a.1 (ENSSDUG00000021392) brinp3a.2 (ENSSDUG00000021368) RGS1 (ENSSDUG00000021355) ENSSDUG00000021346 RGS13 (ENSSDUG00000021341) ENSSDUG00000021333 Yellowtail amberjack MODERN SPECIES 3176 ENSSLDG00000016388 TRMT1L (ENSSLDG00000016579) niban1a (ENSSLDG00000016719) kifap3a (ENSSLDG00000016743) ntmt2 (ENSSLDG00000016809) gorab (ENSSLDG00000016829) prrx1b (ENSSLDG00000016851) ENSSLDG00000016872 ENSSLDG00000016881 SERPINB1 (ENSSLDG00000016912) GFUS (ENSSLDG00000016998) #19 SERPINB1 (ENSSLDG00000017322) bmb (ENSSLDG00000017363) pycr3 (ENSSLDG00000017378) #20 ENSSLDG00000017392 ENSSLDG00000017410 ##22 NOS1AP (ENSSLDG00000017424) ENSSLDG00000017453 ENSSLDG00000017469 rgs4 (ENSSLDG00000017481) rgs5a (ENSSLDG00000017492) rgs16 (ENSSLDG00000017516) rgs8 (ENSSLDG00000017534) ENSSLDG00000017551 brinp3a.1 (ENSSLDG00000017598) brinp3a.2 (ENSSLDG00000017627) RGS1 (ENSSLDG00000017693) ENSSLDG00000017760 RGS13 (ENSSLDG00000017780) ENSSLDG00000017798 uchl5 (ENSSLDG00000017814) Barramundi perch MODERN SPECIES 118 SLC22A23 (ENSLCAG00010022003) ENSLCAG00010022010 BPHL (ENSLCAG00010022012) ENSLCAG00010022017 ENSLCAG00010022023 exoc2 (ENSLCAG00010022058) foxq1b (ENSLCAG00010022101) ENSLCAG00010022104 foxc1b (ENSLCAG00010022108) gmds (ENSLCAG00010022113) MYLK4 (ENSLCAG00010022127) serpinb1 (ENSLCAG00010022152) GFUS (ENSLCAG00010022240) #19 bmb (ENSLCAG00010022274) pycr3 (ENSLCAG00010022281) #20 ENSLCAG00010022288 ##22 Pleuronectoidei ANCESTRAL SPECIES 20 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000164616 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Tongue sole DUPLICATION Tongue sole MODERN SPECIES 11 ENSCSEG00000002576 ENSCSEG00000002570 ENSCSEG00000002563 ADCYAP1R1 (ENSCSEG00000002553) ENSCSEG00000002534 ENSCSEG00000002528 ENSCSEG00000002510 brinp3a.2 (ENSCSEG00000002501) brinp3a.1 (ENSCSEG00000002489) ENSCSEG00000002476 ENSCSEG00000002470 ENSCSEG00000002467 ENSCSEG00000002463 gpx7 (ENSCSEG00000002460) pycr3 (ENSCSEG00000002453) #20 ENSCSEG00000002444 ##22 NOS1AP (ENSCSEG00000002438) ENSCSEG00000002428 ENSCSEG00000002426 ENSCSEG00000002423 rgs4 (ENSCSEG00000002417) rgs5a (ENSCSEG00000002407) rgs16 (ENSCSEG00000002403) rgs8 (ENSCSEG00000002391) naprt (ENSCSEG00000002384) #23 C8orf82 (ENSCSEG00000002381) si:ch211-191a24.4 (ENSCSEG00000002379) ENSCSEG00000002372 TNS3 (ENSCSEG00000002350) igfbp3 (ENSCSEG00000002345) igfbp1a (ENSCSEG00000002342) Tongue sole MODERN SPECIES 398 PHYHIP (ENSCSEG00000008133) ppp1r3c2b (ENSCSEG00000008140) gins4 (ENSCSEG00000008143) arid5a (ENSCSEG00000008159) dbnlb (ENSCSEG00000008181) ube2d4 (ENSCSEG00000008262) TCF7L1 (ENSCSEG00000008270) ENSCSEG00000008285 ENSCSEG00000008291 ENSCSEG00000008383 TOP3B (ENSCSEG00000008306) ppm1f (ENSCSEG00000008388) ENSCSEG00000008396 ENSCSEG00000008412 ABCA2 (ENSCSEG00000008487) ENSCSEG00000008550 ##22 ENSCSEG00000008560 ENSCSEG00000008569 ENSCSEG00000008575 ENSCSEG00000008578 ENSCSEG00000008581 ENSCSEG00000008615 cacna1ba (ENSCSEG00000008637) man1b1b (ENSCSEG00000008686) dpp7 (ENSCSEG00000008714) gcnt4a (ENSCSEG00000008779) ENSCSEG00000008788 fxn (ENSCSEG00000008793) HMGCR (ENSCSEG00000008804) TJP2 (ENSCSEG00000008859) ENSCSEG00000008877 Turbot MODERN SPECIES 3 ENSSMAG00000017342 ENSSMAG00000025427 ENSSMAG00000017405 ENSSMAG00000023258 ENSSMAG00000017427 exoc2 (ENSSMAG00000017457) ENSSMAG00000016245 foxq1b (ENSSMAG00000027273) ENSSMAG00000017900 gmds (ENSSMAG00000017919) ENSSMAG00000017949 serpinb1 (ENSSMAG00000017962) GFUS (ENSSMAG00000017998) #19 ENSSMAG00000031375 ENSSMAG00000018009 #20 ENSSMAG00000018035 ##22 ENSSMAG00000018093 FETUB (ENSSMAG00000018229) ENSSMAG00000018171 rgs4 (ENSSMAG00000018245) rgs5a (ENSSMAG00000018254) rgs16 (ENSSMAG00000031478) rgs8 (ENSSMAG00000034333) ENSSMAG00000018296 brinp3a.1 (ENSSMAG00000018477) ENSSMAG00000037354 brinp3a.2 (ENSSMAG00000018500) RGS1 (ENSSMAG00000018545) ENSSMAG00000018558 uchl5 (ENSSMAG00000018584) ENSSMAG00000018582 Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000158520.f ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 ENSGT00940000164211 Climbing perch MODERN SPECIES 17 ENSATEG00000002063 ENSATEG00000002034 ENSATEG00000002027 ENSATEG00000001975 ENSATEG00000001930 exoc2 (ENSATEG00000001786) foxq1b (ENSATEG00000001758) ENSATEG00000001750 foxc1b (ENSATEG00000001744) gmds (ENSATEG00000001738) MYLK4 (ENSATEG00000001723) serpinb1 (ENSATEG00000001710) GFUS (ENSATEG00000001658) #19 ENSATEG00000001649 ENSATEG00000001642 #20 ENSATEG00000001630 ##22 ENSATEG00000001541 ENSATEG00000001493 ENSATEG00000001366 rgs4 (ENSATEG00000001357) rgs5a (ENSATEG00000026228) rgs16 (ENSATEG00000001317) rgs8 (ENSATEG00000028670) ENSATEG00000027469 brinp3a.1 (ENSATEG00000001279) brinp3a.2 (ENSATEG00000001233) RGS1 (ENSATEG00000027604) RGS1 (ENSATEG00000029179) RGS13 (ENSATEG00000025246) ENSATEG00000001159 uchl5 (ENSATEG00000001112) Siamese fighting fish MODERN SPECIES 15 SLC22A23 (ENSBSLG00000014560) ENSBSLG00000014550 BPHL (ENSBSLG00000014545) ENSBSLG00000014535 ENSBSLG00000014531 exoc2 (ENSBSLG00000014365) foxq1b (ENSBSLG00000014349) ENSBSLG00000014341 foxc1b (ENSBSLG00000014330) gmds (ENSBSLG00000014100) MYLK4 (ENSBSLG00000014022) SERPINB1 (ENSBSLG00000014017) gfus.1 (ENSBSLG00000013970) #19 bmb (ENSBSLG00000013956) pycr3 (ENSBSLG00000013948) #20 ENSBSLG00000013927 ##22 NOS1AP (ENSBSLG00000013889) si:ch211-284e20.8 (ENSBSLG00000013880) ENSBSLG00000013870 ENSBSLG00000013854 ENSBSLG00000013834 ENSBSLG00000013818 ENSBSLG00000013811 pomgnt1 (ENSBSLG00000013715) TSPAN1 (ENSBSLG00000013694) ENSBSLG00000013679 PIK3R3 (ENSBSLG00000013563) ENSBSLG00000013282 ENSBSLG00000013235 ENSBSLG00000013139 ENSBSLG00000013051 Zig-zag eel MODERN SPECIES 18 ENSMAMG00000013959 ENSMAMG00000013948 ENSMAMG00000013921 exoc2 (ENSMAMG00000013802) foxq1b (ENSMAMG00000013785) ENSMAMG00000013780 foxc1b (ENSMAMG00000013760) gmds (ENSMAMG00000013750) MYLK4 (ENSMAMG00000013690) serpinb1 (ENSMAMG00000013675) ENSMAMG00000027981 GFUS (ENSMAMG00000013637) #19 ENSMAMG00000013609 ENSMAMG00000013588 #20 ENSMAMG00000024954 ENSMAMG00000025121 ##22 ENSMAMG00000013479 ENSMAMG00000013451 ENSMAMG00000013412 rgs4 (ENSMAMG00000028571) rgs5a (ENSMAMG00000026413) rgs16 (ENSMAMG00000013370) rgs8 (ENSMAMG00000013347) ENSMAMG00000013302 brinp3a.1 (ENSMAMG00000013265) brinp3a.2 (ENSMAMG00000013230) RGS1 (ENSMAMG00000026640) ENSMAMG00000013180 RGS13 (ENSMAMG00000025084) ENSMAMG00000013165 uchl5 (ENSMAMG00000013126) Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 Ballan wrasse MODERN SPECIES 99 SERPINB1 (ENSLBEG00000004774) GFUS (ENSLBEG00000004725) #19 SERPINB1 (ENSLBEG00000004707) GFUS (ENSLBEG00000004675) #19 bmb (ENSLBEG00000004641) pycr3 (ENSLBEG00000004569) #20 ENSLBEG00000004547 ##22 bcar3 (ENSLBEG00000004492) fnbp1l (ENSLBEG00000004447) si:ch211-198n5.11 (ENSLBEG00000004415) ENSLBEG00000004357 rpe65b (ENSLBEG00000004286) depdc1a (ENSLBEG00000004155) ENSLBEG00000004061 ENSLBEG00000003997 ENSLBEG00000003965 ENSLBEG00000003949 ENSLBEG00000003876 b3galt2 (ENSLBEG00000003837) glrx2 (ENSLBEG00000003827) uchl5 (ENSLBEG00000003786) ENSLBEG00000003763 Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 Perciformes ANCESTRAL SPECIES 8 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 Pike perch MODERN SPECIES 59 SLC22A23 (ENSSLUG00000010001) ENSSLUG00000010011 BPHL (ENSSLUG00000010013) ENSSLUG00000010024 ENSSLUG00000010042 exoc2 (ENSSLUG00000010077) foxq1b (ENSSLUG00000010140) ENSSLUG00000010147 foxc1b (ENSSLUG00000010148) gmds (ENSSLUG00000010158) MYLK4 (ENSSLUG00000010214) serpinb1 (ENSSLUG00000010225) GFUS (ENSSLUG00000010245) #19 bmb (ENSSLUG00000010448) pycr3 (ENSSLUG00000010455) #20 ENSSLUG00000010467 ##22 NOS1AP (ENSSLUG00000010489) ENSSLUG00000010510 ENSSLUG00000010515 rgs4 (ENSSLUG00000010518) rgs5a (ENSSLUG00000010524) rgs16 (ENSSLUG00000010534) rgs8 (ENSSLUG00000010539) ENSSLUG00000010550 ENSSLUG00000010614 brinp3a.1 (ENSSLUG00000010615) ENSSLUG00000010626 brinp3a.2 (ENSSLUG00000010632) RGS1 (ENSSLUG00000010646) ENSSLUG00000010681 RGS13 (ENSSLUG00000010684) Channel bull blenny MODERN SPECIES 18 ENSCGOG00000006323 BPHL (ENSCGOG00000006325) ENSCGOG00000006329 ENSCGOG00000006333 exoc2 (ENSCGOG00000006386) foxq1b (ENSCGOG00000007876) ENSCGOG00000007879 foxc1b (ENSCGOG00000007881) gmds (ENSCGOG00000007884) ENSCGOG00000007953 MYLK4 (ENSCGOG00000007958) ENSCGOG00000007966 GFUS (ENSCGOG00000007969) #19 bmb (ENSCGOG00000008036) pycr3 (ENSCGOG00000008041) #20 ENSCGOG00000008045 ##22 NOS1AP (ENSCGOG00000008054) si:ch211-284e20.8 (ENSCGOG00000008060) ENSCGOG00000008067 rgs4 (ENSCGOG00000008084) rgs5a (ENSCGOG00000008086) rgs16 (ENSCGOG00000008122) rgs8 (ENSCGOG00000008125) ENSCGOG00000008134 brinp3a.1 (ENSCGOG00000008162) brinp3a.2 (ENSCGOG00000008259) RGS1 (ENSCGOG00000008431) ENSCGOG00000008432 RGS13 (ENSCGOG00000008437) ENSCGOG00000008438 uchl5 (ENSCGOG00000000533) Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 ENSGT00940000164211 Stickleback DUPLICATION Stickleback MODERN SPECIES 8 ADCYAP1R1 (ENSGACG00000005402) ENSGACG00000005411 ENSGACG00000005415 ENSGACG00000005418 ENSGACG00000005420 prpf38a (ENSGACG00000005423) orc1 (ENSGACG00000005437) ENSGACG00000005454 ENSGACG00000005458 SERPINB1 (ENSGACG00000005463) SERPINB1 (ENSGACG00000005513) SERPINB1 (ENSGACG00000005532) GFUS (ENSGACG00000005567) #19 ENSGACG00000005636 pycr3 (ENSGACG00000005640) #20 ENSGACG00000005657 ##22 NOS1AP (ENSGACG00000005672) ENSGACG00000005688 ENSGACG00000005690 ENSGACG00000005701 rgs5a (ENSGACG00000005708) rgs16 (ENSGACG00000005760) rgs8 (ENSGACG00000005773) brinp3a.1 (ENSGACG00000005786) brinp3a.2 (ENSGACG00000005791) RGS13 (ENSGACG00000005823) ENSGACG00000005845 uchl5 (ENSGACG00000005854) glrx2 (ENSGACG00000005873) b3galt2 (ENSGACG00000005881) ENSGACG00000005883 Stickleback MODERN SPECIES 97 ENSGACG00000001421 ##22 Lumpfish MODERN SPECIES 19 DSP (ENSCLMG00005018027) SLC22A23 (ENSCLMG00005018012) ENSCLMG00005018008 BPHL (ENSCLMG00005017955) ENSCLMG00005017953 ENSCLMG00005017950 exoc2 (ENSCLMG00005017916) foxq1b (ENSCLMG00005017909) ENSCLMG00005017908 foxc1b (ENSCLMG00005017906) gmds (ENSCLMG00005017009) serpinb1 (ENSCLMG00005016998) GFUS (ENSCLMG00005016950) #19 bmb (ENSCLMG00005016946) pycr3 (ENSCLMG00005016842) #20 ENSCLMG00005016841 ##22 NOS1AP (ENSCLMG00005016839) si:ch211-284e20.8 (ENSCLMG00005016832) ENSCLMG00005016829 rgs5a (ENSCLMG00005016828) rgs16 (ENSCLMG00005016780) rgs8 (ENSCLMG00005016778) ENSCLMG00005016775 brinp3a.1 (ENSCLMG00005016773) brinp3a.2 (ENSCLMG00005016770) RGS1 (ENSCLMG00005016757) ENSCLMG00005016752 RGS13 (ENSCLMG00005016751) ENSCLMG00005016748 uchl5 (ENSCLMG00005016739) glrx2 (ENSCLMG00005016735) Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b.d ENSGT00940000157937.b ENSGT00940000155195 Gilthead seabream MODERN SPECIES 2 tbc1d7 (ENSSAUG00010013932) ENSSAUG00010013153 SLC22A23 (ENSSAUG00010013143) BPHL (ENSSAUG00010013142) DUSP22 (ENSSAUG00010013140) ENSSAUG00010013134 exoc2 (ENSSAUG00010013119) foxq1b (ENSSAUG00010013112) ENSSAUG00010013110 foxc1b (ENSSAUG00010013109) gmds (ENSSAUG00010013107) serpinb1 (ENSSAUG00010013106) GFUS (ENSSAUG00010012522) #19 bmb (ENSSAUG00010012513) pycr3 (ENSSAUG00010012510) #20 ENSSAUG00010012506 ##22 NOS1AP (ENSSAUG00010012501) ENSSAUG00010012496 ENSSAUG00010012492 ENSSAUG00010012490 ENSSAUG00010012488 rgs4 (ENSSAUG00010012486) rgs5a (ENSSAUG00010012485) rgs16 (ENSSAUG00010012483) rgs8 (ENSSAUG00010012480) ENSSAUG00010012462 brinp3a.1 (ENSSAUG00010012452) ENSSAUG00010012451 brinp3a.2 (ENSSAUG00010012440) RGS1 (ENSSAUG00010012436) RGS13 (ENSSAUG00010012433) Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b.d ENSGT00940000157937.b ENSGT00940000155195 European seabass MODERN SPECIES 17 ENSDLAG00005014837 ENSDLAG00005028299 ENSDLAG00005030830 ENSDLAG00005028053 ENSDLAG00005015248 exoc2 (ENSDLAG00005015259) foxq1b (ENSDLAG00005026408) ENSDLAG00005015450 foxc1b (ENSDLAG00005026999) gmds (ENSDLAG00005015474) MYLK4 (ENSDLAG00005015580) serpinb1 (ENSDLAG00005015625) GFUS (ENSDLAG00005015658) #19 ENSDLAG00005015968 ENSDLAG00005032974 #20 ENSDLAG00005016026 ##22 ENSDLAG00005016095 ENSDLAG00005016073 ENSDLAG00005034331 rgs4 (ENSDLAG00005029372) rgs5a (ENSDLAG00005016160) rgs16 (ENSDLAG00005016186) rgs8 (ENSDLAG00005030910) ENSDLAG00005016203 brinp3a.1 (ENSDLAG00005016237) brinp3a.2 (ENSDLAG00005016277) RGS1 (ENSDLAG00005016393) ENSDLAG00005016412 RGS13 (ENSDLAG00005028322) ENSDLAG00005016445 uchl5 (ENSDLAG00005016459) Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 489 DSP (ENSLCRG00005011160) SLC22A23 (ENSLCRG00005011172) ENSLCRG00005011175 ENSLCRG00005011177 ENSLCRG00005011179 ENSLCRG00005011181 exoc2 (ENSLCRG00005011191) foxq1b (ENSLCRG00005011207) ENSLCRG00005011210 foxc1b (ENSLCRG00005011211) gmds (ENSLCRG00005011216) MYLK4 (ENSLCRG00005011276) ENSLCRG00005011279 bmb (ENSLCRG00005011333) pycr3 (ENSLCRG00005011338) #20 ENSLCRG00005011342 ##22 ENSLCRG00005011349 ##22 ENSLCRG00005011465 ENSLCRG00005011469 ENSLCRG00005011471 NOS1AP (ENSLCRG00005011474) ENSLCRG00005011479 ENSLCRG00005011481 ADCYAP1R1 (ENSLCRG00005011512) ENSLCRG00005015010 ENSLCRG00005015011 ZC3H3 (ENSLCRG00005000788) #26 mafaa (ENSLCRG00005000798) atpaf1 (ENSLCRG00005000801) RHPN1 (ENSLCRG00005000827) #27 TUT4 (ENSLCRG00005000937) Large yellow croaker MODERN SPECIES 489 gpx7 (ENSLCRG00005002246) TUT4 (ENSLCRG00005000937) RHPN1 (ENSLCRG00005000827) #27 atpaf1 (ENSLCRG00005000801) mafaa (ENSLCRG00005000798) ZC3H3 (ENSLCRG00005000788) #26 ENSLCRG00005015011 ENSLCRG00005015010 ADCYAP1R1 (ENSLCRG00005011512) ENSLCRG00005011481 ENSLCRG00005011479 NOS1AP (ENSLCRG00005011474) ENSLCRG00005011471 ENSLCRG00005011469 ENSLCRG00005011465 ENSLCRG00005011349 ##22 ENSLCRG00005011342 ##22 pycr3 (ENSLCRG00005011338) #20 bmb (ENSLCRG00005011333) ENSLCRG00005011279 MYLK4 (ENSLCRG00005011276) gmds (ENSLCRG00005011216) foxc1b (ENSLCRG00005011211) ENSLCRG00005011210 foxq1b (ENSLCRG00005011207) exoc2 (ENSLCRG00005011191) ENSLCRG00005011181 ENSLCRG00005011179 ENSLCRG00005011177 ENSLCRG00005011175 SLC22A23 (ENSLCRG00005011172) Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00940000154384 ENSGT00950000183189.a.b.a.h ENSGT00390000013701 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00740000115898 ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a Fugu MODERN SPECIES 12 ttc14 (ENSTRUG00000001224) ENSTRUG00000026690 ENSTRUG00000003462 ENSTRUG00000002946 ENSTRUG00000021519 exoc2 (ENSTRUG00000001810) foxq1b (ENSTRUG00000001789) ENSTRUG00000007367 foxc1b (ENSTRUG00000007340) gmds (ENSTRUG00000023830) MYLK4 (ENSTRUG00000007027) serpinb1 (ENSTRUG00000006831) GFUS (ENSTRUG00000006484) #19 bmb (ENSTRUG00000022483) pycr3 (ENSTRUG00000006233) #20 ENSTRUG00000005970 ##22 NOS1AP (ENSTRUG00000005714) ENSTRUG00000005695 ENSTRUG00000005606 rgs4 (ENSTRUG00000024806) rgs5a (ENSTRUG00000032504) rgs16 (ENSTRUG00000004969) rgs8 (ENSTRUG00000004764) brinp3a.1 (ENSTRUG00000004748) brinp3a.2 (ENSTRUG00000004397) ENSTRUG00000020222 RGS13 (ENSTRUG00000021667) ENSTRUG00000003726 uchl5 (ENSTRUG00000019878) glrx2 (ENSTRUG00000003061) b3galt2 (ENSTRUG00000003025) Tetraodon MODERN SPECIES dnajc19 (ENSTNIG00000003791) fxr1 (ENSTNIG00000003790) ttc14 (ENSTNIG00000003789) ENSTNIG00000004324 ENSTNIG00000008222 exoc2 (ENSTNIG00000008223) ENSTNIG00000008224 foxc1b (ENSTNIG00000001080) gmds (ENSTNIG00000008225) MYLK4 (ENSTNIG00000008226) SERPINB1 (ENSTNIG00000008229) GFUS (ENSTNIG00000008230) #19 ENSTNIG00000008227 GFUS (ENSTNIG00000008228) #19 pycr3 (ENSTNIG00000008231) #20 ENSTNIG00000008232 ##22 NOS1AP (ENSTNIG00000008233) rgs5a (ENSTNIG00000000353) ENSTNIG00000008234 ENSTNIG00000008235 ENSTNIG00000002444 rgs8 (ENSTNIG00000008236) ENSTNIG00000012341 ENSTNIG00000012340 brinp3a.2 (ENSTNIG00000012339) RGS13 (ENSTNIG00000012338) ENSTNIG00000012337 uchl5 (ENSTNIG00000012336) glrx2 (ENSTNIG00000012335) b3galt2 (ENSTNIG00000012334) ENSTNIG00000012333 Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Cichlidae ANCESTRAL SPECIES 42 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a.h.a ENSGT00950000182930.A.b.k.a.g ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Pseudocrenilabrinae ANCESTRAL SPECIES 23 ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.yb.a.b.b ENSGT00940000154573.yb.b.b ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a.h.a ENSGT00950000182930.A.b.k.a.g ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Nile tilapia MODERN SPECIES 8 exoc2 (ENSONIG00000006399) foxq1b (ENSONIG00000006405) ENSONIG00000006406 foxc1b (ENSONIG00000028353) gmds (ENSONIG00000006408) MYLK4 (ENSONIG00000006411) ENSONIG00000006413 ENSONIG00000039945 ENSONIG00000029522 SERPINB1 (ENSONIG00000011009) ENSONIG00000037905 ENSONIG00000011008 gfus.1 (ENSONIG00000011002) #19 bmb (ENSONIG00000036006) pycr3 (ENSONIG00000011000) #20 ENSONIG00000010994 ##22 NOS1AP (ENSONIG00000010991) ENSONIG00000010989 ENSONIG00000042896 ENSONIG00000028457 rgs4 (ENSONIG00000010978) rgs5a (ENSONIG00000010973) rgs16 (ENSONIG00000010971) rgs8 (ENSONIG00000010969) brinp3a.1 (ENSONIG00000010968) ENSONIG00000042574 ENSONIG00000038796 ENSONIG00000031609 brinp3a.2 (ENSONIG00000010962) RGS1 (ENSONIG00000010960) ENSONIG00000010958 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.yb.a.a ENSGT00940000154573.yb.a.b.a.a ENSGT00940000154573.yb.b.a ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00940000179152 ENSGT00950000182930.A.b.k.a.h.a ENSGT00950000182930.A.b.k.a.g ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d Lyretail cichlid MODERN SPECIES 343 ENSNBRG00000022723 ENSNBRG00000022711 exoc2 (ENSNBRG00000022700) foxq1b (ENSNBRG00000022694) ENSNBRG00000022684 foxc1b (ENSNBRG00000022674) gmds (ENSNBRG00000022664) MYLK4 (ENSNBRG00000022616) SERPINB1 (ENSNBRG00000022566) ENSNBRG00000022554 ENSNBRG00000022544 SERPINB1 (ENSNBRG00000022502) gfus.1 (ENSNBRG00000022482) #19 bmb (ENSNBRG00000022463) pycr3 (ENSNBRG00000022439) #20 ENSNBRG00000022418 ##22 ENSNBRG00000022095 NOS1AP (ENSNBRG00000022024) ENSNBRG00000022001 ENSNBRG00000021975 ENSNBRG00000021918 rgs4 (ENSNBRG00000021890) rgs5a (ENSNBRG00000021880) rgs16 (ENSNBRG00000021866) rgs8 (ENSNBRG00000021851) brinp3a.1 (ENSNBRG00000021835) brinp3a.2 (ENSNBRG00000021812) RGS1 (ENSNBRG00000021799) ENSNBRG00000021783 RGS13 (ENSNBRG00000021769) ENSNBRG00000021750 Haplochromini ANCESTRAL SPECIES 9 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.yb.a.a ENSGT00940000154573.yb.a.b.a.a ENSGT00940000154573.yb.b.a ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00940000179152 ENSGT00950000182930.A.b.k.a.h.a ENSGT00950000182930.A.b.k.a.g ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.yb.a.a ENSGT00940000154573.yb.a.b.a.a ENSGT00940000154573.yb.b.a ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00940000179152 ENSGT00950000182930.A.b.k.a.h.a ENSGT00950000182930.A.b.k.a.g ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d Haplochromini_B ANCESTRAL SPECIES 32 ENSGT00390000010872 ENSGT01080000257342.B.a.a.a.b.c.d.b ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.yb.a.a ENSGT00940000154573.yb.a.b.a.b.b.a ENSGT00940000154573.yb.a.b.a.b.a ENSGT00940000154573.yb.a.b.a.b.b.b ENSGT00940000154573.yb.b.a ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00990000211504 ENSGT00950000182930.A.b.k.b ENSGT00940000179152 ENSGT00950000182930.A.b.k.a.h.a ENSGT00950000182930.A.b.k.a.g ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b Eastern happy MODERN SPECIES 8 exoc2 (ENSACLG00000024009) ENSACLG00000024108 foxq1b (ENSACLG00000024112) ENSACLG00000024354 foxc1b (ENSACLG00000024364) gmds (ENSACLG00000024376) MYLK4 (ENSACLG00000024435) SERPINB1 (ENSACLG00000024514) SERPINB1 (ENSACLG00000024535) ENSACLG00000024553 SERPINB1 (ENSACLG00000024570) bmb (ENSACLG00000024589) bmb (ENSACLG00000024618) pycr3 (ENSACLG00000024739) #20 gfus.1 (ENSACLG00000024768) #19 ENSACLG00000024793 ##22 NOS1AP (ENSACLG00000024921) ENSACLG00000024927 ENSACLG00000024930 ENSACLG00000024932 ENSACLG00000024937 ENSACLG00000025045 ENSACLG00000025049 rgs4 (ENSACLG00000025053) rgs5a (ENSACLG00000025062) rgs16 (ENSACLG00000025079) rgs8 (ENSACLG00000025099) brinp3a.1 (ENSACLG00000025132) ENSACLG00000025171 brinp3a.2 (ENSACLG00000025181) ENSACLG00000025208 Zebra mbuna MODERN SPECIES 1099 foxq1b (ENSMZEG00005017006) ENSMZEG00005017002 foxc1b (ENSMZEG00005016999) gmds (ENSMZEG00005016991) MYLK4 (ENSMZEG00005016960) SERPINB1 (ENSMZEG00005016910) SERPINB1 (ENSMZEG00005016896) ENSMZEG00005016893 ENSMZEG00005016889 ENSMZEG00005016882 ENSMZEG00005016876 SERPINB1 (ENSMZEG00005016815) gfus.1 (ENSMZEG00005016804) #19 bmb (ENSMZEG00005016793) pycr3 (ENSMZEG00005016789) #20 ENSMZEG00005016784 ##22 ENSMZEG00005016780 ENSMZEG00005016768 brinp3a.1 (ENSMZEG00005016751) brinp3a.1 (ENSMZEG00005015948) rgs8 (ENSMZEG00005015895) rgs16 (ENSMZEG00005015891) rgs5a (ENSMZEG00005015884) rgs4 (ENSMZEG00005015881) ENSMZEG00005015873 ENSMZEG00005015868 ENSMZEG00005015861 ENSMZEG00005015847 ENSMZEG00005015831 ENSMZEG00005015828 brinp3a.2 (ENSMZEG00005015813) P. nyererei MODERN SPECIES 448 ENSPNYG00000022837 ENSPNYG00000022821 foxq1b (ENSPNYG00000022815) ENSPNYG00000022811 foxc1b (ENSPNYG00000022805) gmds (ENSPNYG00000022798) MYLK4 (ENSPNYG00000022786) SERPINB1 (ENSPNYG00000022781) ENSPNYG00000022778 SERPINB1 (ENSPNYG00000022768) gfus.1 (ENSPNYG00000022759) #19 bmb (ENSPNYG00000022754) pycr3 (ENSPNYG00000022745) #20 ENSPNYG00000022739 ##22 NOS1AP (ENSPNYG00000022735) si:ch211-284e20.8 (ENSPNYG00000022728) ENSPNYG00000022725 ENSPNYG00000022716 rgs4 (ENSPNYG00000022708) rgs5a (ENSPNYG00000022703) ENSPNYG00000022698 rgs16 (ENSPNYG00000022694) rgs8 (ENSPNYG00000022688) brinp3a.1 (ENSPNYG00000022678) Burton s mouthbrooder MODERN SPECIES 490 ENSHBUG00000022786 ENSHBUG00000022769 exoc2 (ENSHBUG00000022713) foxq1b (ENSHBUG00000022645) ENSHBUG00000022637 foxc1b (ENSHBUG00000022633) ENSHBUG00000022610 MYLK4 (ENSHBUG00000022590) SERPINB1 (ENSHBUG00000001180) ENSHBUG00000022523 ENSHBUG00000022506 ENSHBUG00000000686 gfus.1 (ENSHBUG00000022459) #19 bmb (ENSHBUG00000022429) pycr3 (ENSHBUG00000000684) #20 ENSHBUG00000022389 ##22 Midas cichlid MODERN SPECIES 1114 ENSACIG00000011351 ENSACIG00000011331 exoc2 (ENSACIG00000011279) foxq1b (ENSACIG00000011267) ENSACIG00000011257 foxc1b (ENSACIG00000011245) gmds (ENSACIG00000011185) MYLK4 (ENSACIG00000011155) SERPINB1 (ENSACIG00000011094) SERPINB1 (ENSACIG00000011072) SERPINB4 (ENSACIG00000011045) ENSACIG00000011026 gfus.1 (ENSACIG00000011000) #19 bmb (ENSACIG00000010983) pycr3 (ENSACIG00000010917) #20 ENSACIG00000010650 ##22 NOS1AP (ENSACIG00000010596) si:ch211-284e20.8 (ENSACIG00000010573) ENSACIG00000010564 ENSACIG00000010474 ENSACIG00000010457 ENSACIG00000010389 ENSACIG00000010367 rgs4 (ENSACIG00000010311) rgs5a (ENSACIG00000010297) rgs16 (ENSACIG00000010280) rgs8 (ENSACIG00000010268) brinp3a.1 (ENSACIG00000010246) brinp3a.2 (ENSACIG00000010221) ENSACIG00000010209 ENSACIG00000010200 Pomacentridae ANCESTRAL SPECIES 16 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.tb ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00950000183022.a.a.b.b ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d Amphiprion ANCESTRAL SPECIES 146 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573.tb ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT01090000260029.a.a.b.a.b ENSGT00940000155265.b.b.b.d ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 Clown anemonefish MODERN SPECIES 1358 ENSAOCG00000014568 ENSAOCG00000014554 exoc2 (ENSAOCG00000014517) foxq1b (ENSAOCG00000014411) ENSAOCG00000014402 foxc1b (ENSAOCG00000014392) gmds (ENSAOCG00000014366) MYLK4 (ENSAOCG00000014322) serpinb1 (ENSAOCG00000014290) gfus.1 (ENSAOCG00000014276) #19 bmb (ENSAOCG00000014240) pycr3 (ENSAOCG00000014222) #20 ENSAOCG00000014204 ##22 ENSAOCG00000014144 ENSAOCG00000014126 Orange clownfish MODERN SPECIES 11 SLC22A23 (ENSAPEG00000017304) ENSAPEG00000017351 BPHL (ENSAPEG00000017386) ENSAPEG00000017458 ENSAPEG00000017482 exoc2 (ENSAPEG00000017527) foxq1b (ENSAPEG00000017667) ENSAPEG00000017680 foxc1b (ENSAPEG00000017689) gmds (ENSAPEG00000017736) MYLK4 (ENSAPEG00000017773) serpinb1 (ENSAPEG00000017846) gfus.1 (ENSAPEG00000017859) #19 bmb (ENSAPEG00000017928) pycr3 (ENSAPEG00000017960) #20 ENSAPEG00000018096 ##22 ENSAPEG00000018402 ENSAPEG00000018427 NOS1AP (ENSAPEG00000018568) ENSAPEG00000018576 ENSAPEG00000018590 rgs4 (ENSAPEG00000018600) rgs5a (ENSAPEG00000018606) ENSAPEG00000018635 ENSAPEG00000018855 C8orf82 (ENSAPEG00000019423) naprt (ENSAPEG00000019436) #23 ENSAPEG00000019454 s1pr1 (ENSAPEG00000019550) dph5 (ENSAPEG00000019561) slc30a7 (ENSAPEG00000019606) Spiny chromis MODERN SPECIES 2439 pycr3 (ENSAPOG00000023383) #20 ENSAPOG00000023431 ##22 Bicolor damselfish MODERN SPECIES 354 SLC22A23 (ENSSPAG00000016496) ENSSPAG00000016539 BPHL (ENSSPAG00000016548) ENSSPAG00000016578 ENSSPAG00000016600 exoc2 (ENSSPAG00000016643) foxq1b (ENSSPAG00000016754) ENSSPAG00000016763 foxc1b (ENSSPAG00000016777) gmds (ENSSPAG00000016786) MYLK4 (ENSSPAG00000016833) serpinb1 (ENSSPAG00000016873) gfus.1 (ENSSPAG00000016890) #19 bmb (ENSSPAG00000016905) pycr3 (ENSSPAG00000016938) #20 ENSSPAG00000017036 ##22 ENSSPAG00000017074 ENSSPAG00000017085 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000158520.f ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000158520.f ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.e.b ENSGT00940000158520.f ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 Mangrove rivulus MODERN SPECIES 119 foxq1b (ENSKMAG00000011355) ENSKMAG00000011366 foxc1b (ENSKMAG00000011382) gmds (ENSKMAG00000011393) MYLK4 (ENSKMAG00000011463) serpinb1 (ENSKMAG00000011531) gfus.1 (ENSKMAG00000011559) #19 bmb (ENSKMAG00000011598) pycr3 (ENSKMAG00000011633) #20 ENSKMAG00000011692 ##22 NOS1AP (ENSKMAG00000011805) si:ch211-284e20.8 (ENSKMAG00000011849) ENSKMAG00000011874 rgs4 (ENSKMAG00000011908) rgs5a (ENSKMAG00000011922) rgs16 (ENSKMAG00000011939) rgs8 (ENSKMAG00000011953) brinp3a.1 (ENSKMAG00000011976) brinp3a.2 (ENSKMAG00000012002) RGS1 (ENSKMAG00000012046) ENSKMAG00000012066 RGS13 (ENSKMAG00000012080) ENSKMAG00000012095 uchl5 (ENSKMAG00000012107) glrx2 (ENSKMAG00000012140) Turquoise killifish MODERN SPECIES 1626 PHACTR1 (ENSNFUG00015008101) sirt5 (ENSNFUG00015008145) adcy1a (ENSNFUG00015008168) IGFBP1A (ENSNFUG00015008202) IGFBP3 (ENSNFUG00015008208) ENSNFUG00015008214 PHLPP1 (ENSNFUG00015008262) MARVELD3 (ENSNFUG00015008625) C20H8ORF82 (ENSNFUG00015008628) NAPRT1 (ENSNFUG00015008632) #23 PLCG1 (ENSNFUG00015008639) ENSNFUG00015009202 ENSNFUG00015009216 ENSNFUG00015009228 pycr3 (ENSNFUG00015009389) #20 ENSNFUG00015009561 ##22 NOS1AP (ENSNFUG00015009572) si:ch211-284e20.8 (ENSNFUG00015009598) ENSNFUG00015009620 RGS4 (ENSNFUG00015009639) RGS5A (ENSNFUG00015009655) RGS8 (ENSNFUG00015009677) ENSNFUG00015009684 ENSNFUG00015009690 ENSNFUG00015009697 FAM5CA (ENSNFUG00015009712) FAM5C (ENSNFUG00015009745) ENSNFUG00015009846 ENSNFUG00015009851 ENSNFUG00015009861 DNAI2A (ENSNFUG00015009869) Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a Poeciliinae ANCESTRAL SPECIES 7 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a Poecilia ANCESTRAL SPECIES 1 ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00940000165627.a.b.c.a.c.a ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a NAME_6 ANCESTRAL SPECIES 217 ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00940000165627.a.b.c.a.c.a ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b.l ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C Amazon molly MODERN SPECIES 521 ENSPFOG00000000913 BPHL (ENSPFOG00000000738) DUSP22 (ENSPFOG00000000707) ENSPFOG00000000657 exoc2 (ENSPFOG00000000518) foxq1b (ENSPFOG00000020964) ENSPFOG00000000493 foxc1b (ENSPFOG00000020963) gmds (ENSPFOG00000000460) MYLK4 (ENSPFOG00000000417) serpinb1 (ENSPFOG00000000383) gfus.1 (ENSPFOG00000000344) #19 bmb (ENSPFOG00000000333) ENSPFOG00000000328 pycr3 (ENSPFOG00000000311) #20 ENSPFOG00000000287 ##22 NOS1AP (ENSPFOG00000000240) si:ch211-284e20.8 (ENSPFOG00000000219) ENSPFOG00000000206 rgs4 (ENSPFOG00000000168) rgs5a (ENSPFOG00000000152) rgs16 (ENSPFOG00000000138) rgs8 (ENSPFOG00000000132) Sailfin molly MODERN SPECIES 520 ENSPLAG00000004894 BPHL (ENSPLAG00000004908) ENSPLAG00000004935 ENSPLAG00000004958 exoc2 (ENSPLAG00000005035) foxq1b (ENSPLAG00000005054) ENSPLAG00000005081 foxc1b (ENSPLAG00000005100) gmds (ENSPLAG00000005107) MYLK4 (ENSPLAG00000005181) serpinb1 (ENSPLAG00000005190) gfus.1 (ENSPLAG00000005207) #19 bmb (ENSPLAG00000005217) ENSPLAG00000005241 pycr3 (ENSPLAG00000005246) #20 ENSPLAG00000005255 ##22 ENSPLAG00000005286 Guppy MODERN SPECIES 456 ENSPREG00000009785 BPHL (ENSPREG00000009797) ENSPREG00000009809 ENSPREG00000009822 exoc2 (ENSPREG00000009865) foxq1b (ENSPREG00000009956) ENSPREG00000009964 foxc1b (ENSPREG00000009977) gmds (ENSPREG00000010018) MYLK4 (ENSPREG00000010045) serpinb1 (ENSPREG00000010101) gfus.1 (ENSPREG00000010122) #19 bmb (ENSPREG00000010195) ENSPREG00000010210 pycr3 (ENSPREG00000010220) #20 ENSPREG00000010251 ##22 ENSPREG00000010298 ENSPREG00000010329 ENSPREG00000010350 si:ch211-284e20.8 (ENSPREG00000010360) ENSPREG00000010376 rgs4 (ENSPREG00000010384) rgs5a (ENSPREG00000010395) rgs16 (ENSPREG00000010411) rgs8 (ENSPREG00000010424) brinp3a.1 (ENSPREG00000010445) brinp3a.2 (ENSPREG00000010498) ENSPREG00000010541 RGS13 (ENSPREG00000010553) ENSPREG00000010561 uchl5 (ENSPREG00000010577) Platyfish MODERN SPECIES 23 ENSXMAG00000021513 BPHL (ENSXMAG00000006270) DUSP22 (ENSXMAG00000006258) ENSXMAG00000006246 ENSXMAG00000028270 exoc2 (ENSXMAG00000006205) foxq1b (ENSXMAG00000019810) ENSXMAG00000006203 foxc1b (ENSXMAG00000026771) gmds (ENSXMAG00000006178) MYLK4 (ENSXMAG00000006166) serpinb1 (ENSXMAG00000006132) gfus.1 (ENSXMAG00000006026) #19 bmb (ENSXMAG00000028194) pycr3 (ENSXMAG00000005975) #20 ENSXMAG00000005913 ##22 NOS1AP (ENSXMAG00000005841) si:ch211-284e20.8 (ENSXMAG00000005828) ENSXMAG00000021679 rgs4 (ENSXMAG00000005694) rgs5a (ENSXMAG00000005651) ENSXMAG00000026031 rgs16 (ENSXMAG00000005615) rgs8 (ENSXMAG00000021008) brinp3a.1 (ENSXMAG00000022365) brinp3a.2 (ENSXMAG00000002716) ENSXMAG00000002714 RGS13 (ENSXMAG00000002712) ENSXMAG00000002706 uchl5 (ENSXMAG00000002691) glrx2 (ENSXMAG00000002687) NAME_4 ANCESTRAL SPECIES 80 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a Sheepshead minnow MODERN SPECIES 672 ENSCVAG00000004756 ENSCVAG00000004780 ENSCVAG00000004783 exoc2 (ENSCVAG00000004892) foxq1b (ENSCVAG00000004906) ENSCVAG00000004917 foxc1b (ENSCVAG00000004922) gmds (ENSCVAG00000004932) MYLK4 (ENSCVAG00000004979) serpinb1 (ENSCVAG00000004994) gfus.1 (ENSCVAG00000005016) #19 bmb (ENSCVAG00000005034) pycr3 (ENSCVAG00000005062) #20 pycr3 (ENSCVAG00000005150) #20 ENSCVAG00000005186 ##22 ENSCVAG00000005194 Mummichog MODERN SPECIES 2298 SLC22A23 (ENSFHEG00000007217) ENSFHEG00000007282 BPHL (ENSFHEG00000007316) ENSFHEG00000007338 ENSFHEG00000007370 exoc2 (ENSFHEG00000007391) foxq1b (ENSFHEG00000007409) ENSFHEG00000007413 foxc1b (ENSFHEG00000007420) gmds (ENSFHEG00000007458) MYLK4 (ENSFHEG00000007485) serpinb1 (ENSFHEG00000007493) gfus.1 (ENSFHEG00000007534) #19 bmb (ENSFHEG00000007543) pycr3 (ENSFHEG00000007588) #20 EEF1D (ENSFHEG00000007592) ##22 NOS1AP (ENSFHEG00000007636) ENSFHEG00000007651 ENSFHEG00000007660 rgs4 (ENSFHEG00000007670) rgs5a (ENSFHEG00000007694) rgs16 (ENSFHEG00000007704) rgs8 (ENSFHEG00000007726) Oryzias ANCESTRAL SPECIES 5 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a Oryzias_a ANCESTRAL SPECIES 14 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00390000004681.a.a #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a Japanese Medaka HdrR MODERN SPECIES 18 SLC22A23 (ENSORLG00000012769) ENSORLG00000012749 BPHL (ENSORLG00000012743) ENSORLG00000012729 ENSORLG00000012712 exoc2 (ENSORLG00000012658) foxq1b (ENSORLG00000027549) foxf2b (ENSORLG00000012595) foxc1b (ENSORLG00000012589) gmds (ENSORLG00000012583) MYLK4 (ENSORLG00000012568) serpinb1 (ENSORLG00000012555) gfus.1 (ENSORLG00000012522) #19 bmb (ENSORLG00000012489) pycr3 (ENSORLG00000012480) #20 ENSORLG00000012458 ##22 ENSORLG00000023345 ENSORLG00000012413 ENSORLG00000012401 ENSORLG00000024938 rgs4 (ENSORLG00000012383) rgs5a (ENSORLG00000012358) rgs16 (ENSORLG00000012336) rgs8 (ENSORLG00000028461) ENSORLG00000025887 ENSORLG00000023020 brinp3a.1 (ENSORLG00000024057) brinp3a.2 (ENSORLG00000012298) ENSORLG00000024172 RGS13 (ENSORLG00000023386) ENSORLG00000026170 Chinese medaka MODERN SPECIES 618 ENSOSIG00000005249 ENSOSIG00000005250 serpinb1 (ENSOSIG00000005257) bmb (ENSOSIG00000005359) pycr3 (ENSOSIG00000005362) #20 ENSOSIG00000005379 ##22 NOS1AP (ENSOSIG00000005429) ENSOSIG00000005430 si:ch211-284e20.8 (ENSOSIG00000005432) rgs4 (ENSOSIG00000005434) rgs5a (ENSOSIG00000005435) rgs16 (ENSOSIG00000005437) rgs8 (ENSOSIG00000005439) brinp3a.1 (ENSOSIG00000005440) Oryzias_b ANCESTRAL SPECIES 15 ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000157153.x ENSGT00940000166222 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00440000033640.h.b ENSGT00940000156211.a.a ENSGT00940000154573 ENSGT00740000115898 ENSGT00390000004681.a.a #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00510000046975.b ENSGT00950000182930.A.b.k.b ENSGT00950000182930.A.b.k.a ENSGT00940000159036 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000177827 ENSGT00940000158520.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 Indian medaka MODERN SPECIES 13 SLC22A23 (ENSOMEG00000014253) ENSOMEG00000014224 ENSOMEG00000014211 exoc2 (ENSOMEG00000014167) foxq1b (ENSOMEG00000014047) ENSOMEG00000014039 foxc1b (ENSOMEG00000014024) gmds (ENSOMEG00000014001) MYLK4 (ENSOMEG00000013922) serpinb1 (ENSOMEG00000013821) ENSOMEG00000013791 ENSOMEG00000013772 bmb (ENSOMEG00000013752) gfus.1 (ENSOMEG00000013720) #19 pycr3 (ENSOMEG00000013669) #20 ENSOMEG00000013606 ##22 NOS1AP (ENSOMEG00000013535) ENSOMEG00000013515 ENSOMEG00000013506 rgs4 (ENSOMEG00000013485) rgs5a (ENSOMEG00000013472) rgs16 (ENSOMEG00000013439) rgs8 (ENSOMEG00000013410) brinp3a.1 (ENSOMEG00000013366) brinp3a.2 (ENSOMEG00000013325) ENSOMEG00000013302 ENSOMEG00000013292 ENSOMEG00000013279 RGS13 (ENSOMEG00000013262) ENSOMEG00000013248 uchl5 (ENSOMEG00000013224) Javanese ricefish MODERN SPECIES 18 ENSOJAG00000008047 BPHL (ENSOJAG00000007943) ENSOJAG00000007921 ENSOJAG00000007896 exoc2 (ENSOJAG00000007824) foxq1b (ENSOJAG00000007806) ENSOJAG00000007794 ENSOJAG00000007781 ENSOJAG00000007767 foxc1b (ENSOJAG00000007752) gmds (ENSOJAG00000007482) serpinb1 (ENSOJAG00000007436) gfus.1 (ENSOJAG00000007261) #19 bmb (ENSOJAG00000007248) pycr3 (ENSOJAG00000007241) #20 ENSOJAG00000007215 ##22 ENSOJAG00000007193 NOS1AP (ENSOJAG00000007163) si:ch211-284e20.8 (ENSOJAG00000007152) ENSOJAG00000007140 rgs4 (ENSOJAG00000007128) rgs5a (ENSOJAG00000007107) rgs16 (ENSOJAG00000007100) rgs8 (ENSOJAG00000007083) brinp3a.1 (ENSOJAG00000007063) ENSOJAG00000007012 rtca (ENSOJAG00000006951) ENSOJAG00000006938 brinp3a.2 (ENSOJAG00000006924) ENSOJAG00000006884 ENSOJAG00000006850 Cod MODERN SPECIES 3 ENSGMOG00000016994 exoc2 (ENSGMOG00000017001) foxq1b (ENSGMOG00000035151) ENSGMOG00000017082 foxc1b (ENSGMOG00000017090) gmds (ENSGMOG00000017103) ENSGMOG00000017124 ENSGMOG00000025150 MYLK4 (ENSGMOG00000017147) ENSGMOG00000023052 serpinb1 (ENSGMOG00000013968) ENSGMOG00000013987 #19 ENSGMOG00000031940 ENSGMOG00000014035 #20 ENSGMOG00000026391 ENSGMOG00000014076 ##22 ENSGMOG00000014110 ENSGMOG00000033442 angptl3 (ENSGMOG00000018204) DOCK7 (ENSGMOG00000018152) atg4c (ENSGMOG00000018222) foxd3 (ENSGMOG00000018243) alg6 (ENSGMOG00000018248) efcab7 (ENSGMOG00000018297) ENSGMOG00000026849 ENSGMOG00000029635 ROR1 (ENSGMOG00000011015) CACHD1 (ENSGMOG00000013506) ENSGMOG00000032384 ENSGMOG00000033732 RAVER2 (ENSGMOG00000013535) Protacanthopterygii ANCESTRAL SPECIES 30 ENSGT00390000007874 ENSGT01030000234633.A.a.b ENSGT01030000234597.a.b.a.b ENSGT00940000156618.c.a ENSGT01050000244824.B ENSGT00940000159860.e ENSGT00390000003161 ENSGT00390000004681.a.a #19 ENSGT00950000183014.f.b.b.a.a ##22 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT01060000252363 ENSGT00940000154573.db ENSGT00940000156211.a.a ENSGT00440000033640.h ENSGT00940000162303.a.a ENSGT00940000163866.a.b ENSGT00940000162937.a.a ENSGT00390000010872 ENSGT00940000166222 ENSGT00940000157153.x ENSGT00390000004746 ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b ENSGT00940000167364 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 15 ENSGT01030000234624.b.b.c.a.a ENSGT00940000153229.A.a.b ENSGT00940000158019.g ENSGT01100000263524.B.b.b.n ENSGT00390000000568.n ENSGT01050000245154 ENSGT00940000158019.h.a.a ENSGT00390000000568.m ENSGT00950000182909.b.a.a.db ENSGT00950000183111.b.a.b ENSGT01050000244824.B.n ENSGT00390000003161.d ENSGT00390000004681.a.a.g #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a.g ##22 ENSGT00940000154573.db.a Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000155981.h.e ENSGT01030000234624.a.t ENSGT01030000234624.b.b.c.a.b ENSGT01030000234624.b.b.c.a.a ENSGT00940000153229.A.a.b ENSGT00940000158019.g ENSGT01100000263524.B.b.b.n ENSGT00390000000568.n ENSGT00950000182909.b.a.a.db.d ENSGT00950000183111.b.a.b ENSGT01050000244824.B.n ENSGT00390000003161.d ENSGT00390000004681.a.a.g #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a.g ##22 ENSGT00940000154573.db.a ENSGT00940000156211.a.a.b ENSGT00440000033640.h.d ENSGT00940000162303.a.a.c ENSGT00940000163866.a.b.a ENSGT00940000162937.a.a.a ENSGT00390000010872.m ENSGT00940000166222.b ENSGT00390000004746 ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b ENSGT00940000167364.d ENSGT00940000157354.i.c ENSGT00940000154843.F.c.b.g ENSGT00940000155842.s.c ENSGT00940000156080.l.f Salmo ANCESTRAL SPECIES 14 ENSGT00940000155981.h.e ENSGT01030000234624.a.t ENSGT01030000234624.b.b.c.a.b ENSGT01030000234624.b.b.c.a.a ENSGT00940000153229.A.a.b ENSGT00940000158019.g ENSGT01100000263524.B.b.b.n ENSGT00390000000568.n ENSGT00950000182909.b.a.a.db.d ENSGT00950000183111.b.a.b ENSGT01050000244824.B.n ENSGT00390000003161.d ENSGT00390000004681.a.a.g #19 ENSGT00740000115898 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.a.g ##22 ENSGT00940000154573.db.a ENSGT00940000156211.a.a.b ENSGT00440000033640.h.d ENSGT00940000162303.a.a.c ENSGT00940000163866.a.b.a ENSGT00940000162937.a.a.a ENSGT00390000010872.m ENSGT00940000166222.b ENSGT00390000004746 ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b ENSGT00940000167364.d ENSGT00940000157354.i.c ENSGT00940000154843.F.c.b.g ENSGT00390000009122.e ENSGT00940000155842.s.c Atlantic salmon MODERN SPECIES 1 ENSSSAG00000079892 ENSSSAG00000079910 ENSSSAG00000079927 ttr (ENSSSAG00000118339) b4galt6 (ENSSSAG00000079954) opn7a (ENSSSAG00000080081) ENSSSAG00000080164 ENSSSAG00000120970 mep1ba (ENSSSAG00000080805) mcm3l (ENSSSAG00000080838) ENSSSAG00000080932 ENSSSAG00000107918 ENSSSAG00000080945 #19 ENSSSAG00000006996 pycrl (ENSSSAG00000007006) #20 ENSSSAG00000007023 ##22 ENSSSAG00000007035 MYLK4 (ENSSSAG00000007045) gmds (ENSSSAG00000007080) foxc1b (ENSSSAG00000113293) ENSSSAG00000007409 foxq1b (ENSSSAG00000118532) exoc2 (ENSSSAG00000007450) ENSSSAG00000009083 ENSSSAG00000089628 ENSSSAG00000106162 ENSSSAG00000009155 ENSSSAG00000009331 ENSSSAG00000010363 ENSSSAG00000012469 sirt5 (ENSSSAG00000046369) River trout MODERN SPECIES 14 dsc2l (ENSSTUG00000010779) ENSSTUG00000010842 ENSSTUG00000010844 ENSSTUG00000010898 ttr (ENSSTUG00000010910) b4galt6 (ENSSTUG00000010928) opn7a (ENSSTUG00000010998) TRAPPC8 (ENSSTUG00000011036) ENSSTUG00000011223 mep1ba (ENSSTUG00000011231) mcm3l (ENSSTUG00000011263) ARHGAP39 (ENSSTUG00000011571) GFUS (ENSSTUG00000011614) #19 bmb (ENSSTUG00000011664) pycr3 (ENSSTUG00000011685) #20 ENSSTUG00000011722 ##22 SERPINB1 (ENSSTUG00000011763) MYLK4 (ENSSTUG00000011780) ENSSTUG00000011810 foxc1b (ENSSTUG00000011822) ENSSTUG00000011826 foxq1b (ENSSTUG00000011830) exoc2 (ENSSTUG00000011842) ENSSTUG00000012003 BPHL (ENSSTUG00000012027) ENSSTUG00000012033 ENSSTUG00000012036 SLC22A23 (ENSSTUG00000012055) ENSSTUG00000012105 DSP (ENSSTUG00000012156) ENSSTUG00000013449 Huchen MODERN SPECIES 944 dsc2l (ENSHHUG00000008344) ENSHHUG00000008399 ENSHHUG00000008407 ttr (ENSHHUG00000008424) b4galt6 (ENSHHUG00000008434) opn7a (ENSHHUG00000008519) TRAPPC8 (ENSHHUG00000008544) ENSHHUG00000008603 mep1ba (ENSHHUG00000008609) mcm3l (ENSHHUG00000008671) ARHGAP39 (ENSHHUG00000008817) bmb (ENSHHUG00000008849) pycr3 (ENSHHUG00000008884) #20 ENSHHUG00000008916 ##22 SERPINB1 (ENSHHUG00000008952) Salmoninae ANCESTRAL SPECIES 398 ENSGT00390000003161.c ENSGT00390000004681.a.a.h #19 ENSGT00950000183014.f.b.b.a.a.h ##22 ENSGT00940000154573.db.b ENSGT00940000156211.a.a.a ENSGT00440000033640.h.c ENSGT00940000162303.a.a.d ENSGT00940000163866.a.b.b ENSGT00940000162937.a.a.b ENSGT00390000010872.n ENSGT00940000166222.a ENSGT00940000157153.x ENSGT00940000167364.c ENSGT00940000157354.i.d ENSGT00940000154843.F.c.b.h ENSGT00390000009122 ENSGT00940000155842.s.d ENSGT00940000156080.l.e Huchen MODERN SPECIES 1119 TRAPPC8 (ENSHHUG00000010919) ENSHHUG00000011043 ARHGAP39 (ENSHHUG00000011045) GFUS (ENSHHUG00000011072) #19 ENSHHUG00000011149 ##22 SERPINB1 (ENSHHUG00000011224) Salmoninae_a ANCESTRAL SPECIES 46 ENSGT00940000155060.C.a.b.e ENSGT00940000154930.eb.q ENSGT00940000157285.f.d ENSGT00950000182993.B.a.d.b ENSGT00390000015908 ENSGT00940000160354.j.a.b ENSGT00940000156453.b.b ENSGT00940000156037.a.e.c ENSGT00940000155981.h.f ENSGT01050000245154 ENSGT00940000158019.h.a.a ENSGT00390000000568.m ENSGT00950000182909.b.a.a.db.c ENSGT00390000003161.c ENSGT00390000004681.a.a.h #19 ENSGT00950000183014.f.b.b.a.a.h ##22 ENSGT00940000154573.db.b ENSGT00940000156211.a.a.a ENSGT00440000033640.h.c ENSGT00940000162303.a.a.d ENSGT00940000163866.a.b.b ENSGT00940000162937.a.a.b ENSGT00390000010872.n ENSGT00940000166222.a ENSGT00940000157153.x ENSGT00940000167364.c ENSGT00940000157354.i.d ENSGT00940000154843.F.c.b.h ENSGT00390000009122 ENSGT00940000155842.s.d ENSGT00940000156080.l.e Salmo ANCESTRAL SPECIES 20 ENSGT00940000154930.eb.q ENSGT00940000157285.f.d ENSGT00950000182993.B.a.d.b ENSGT00390000015908 ENSGT00940000160354.j.a.b ENSGT00940000156453.b.b ENSGT00940000156037.a.e.c ENSGT00940000155981.h.f ENSGT00970000198016.a ENSGT01050000245154 ENSGT00940000158019.h.b ENSGT00390000000568.m ENSGT00950000182909.b.a.a.db.c ENSGT00390000003161.c ENSGT00390000004681.a.a.h #19 ENSGT00950000183014.f.b.b.a.a.h ##22 ENSGT00940000154573.db.b ENSGT00940000156211.a.a.a ENSGT00440000033640.h.c ENSGT00940000162303.a.a.d ENSGT00940000163866.a.b.b ENSGT00940000162937.a.a.b ENSGT00390000010872.n ENSGT00940000166222.a ENSGT00940000157153.x ENSGT00940000167364.c ENSGT00940000157354.i.d ENSGT00940000154843.F.c.b.h ENSGT00390000009122.f ENSGT00940000155842.s.d ENSGT00940000156080.l.e River trout MODERN SPECIES 33 st3gal3a (ENSSTUG00000007604) ENSSTUG00000007593 ENSSTUG00000007581 psma8 (ENSSTUG00000007482) ENSSTUG00000007462 aqp4 (ENSSTUG00000007451) ENSSTUG00000007430 cdh2 (ENSSTUG00000003569) ENSSTUG00000003387 ENSSTUG00000003367 b4galt6 (ENSSTUG00000002523) TRAPPC8 (ENSSTUG00000002156) ENSSTUG00000002113 ARHGAP39 (ENSSTUG00000002087) GFUS (ENSSTUG00000001584) #19 ENSSTUG00000001505 ##22 SERPINB1 (ENSSTUG00000001469) MYLK4 (ENSSTUG00000001452) gmds (ENSSTUG00000001437) foxc1b (ENSSTUG00000001435) ENSSTUG00000001433 foxq1b (ENSSTUG00000001420) exoc2 (ENSSTUG00000001320) ENSSTUG00000001284 ENSSTUG00000001274 ENSSTUG00000001269 SLC22A23 (ENSSTUG00000001261) DSP (ENSSTUG00000000382) tbc1d7 (ENSSTUG00000000317) PHACTR1 (ENSSTUG00000000308) sirt5 (ENSSTUG00000000298) Atlantic salmon MODERN SPECIES 15 st3gal3a (ENSSSAG00000063800) ENSSSAG00000063782 ENSSSAG00000094900 ENSSSAG00000063671 ENSSSAG00000063775 ENSSSAG00000063657 ENSSSAG00000092225 cdh2 (ENSSSAG00000049983) ENSSSAG00000049657 ENSSSAG00000049611 ENSSSAG00000118560 ENSSSAG00000041824 rn138 (ENSSSAG00000041661) ENSSSAG00000041538 ENSSSAG00000040457 #19 ENSSSAG00000040228 ##22 ENSSSAG00000040373 ENSSSAG00000040154 ENSSSAG00000082157 foxc1b (ENSSSAG00000040140) ENSSSAG00000040106 foxq1b (ENSSSAG00000089918) exoc2 (ENSSSAG00000039795) irf4l (ENSSSAG00000039730) ENSSSAG00000039637 ENSSSAG00000090100 ENSSSAG00000014553 tbc1d7 (ENSSSAG00000013056) ENSSSAG00000118698 sirt5 (ENSSSAG00000011739) adcy1a (ENSSSAG00000010506) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155060.C.a.b.e ENSGT00940000154930.eb.q ENSGT00940000157285.f.d ENSGT00950000182993.B.a.d.b ENSGT00390000015908 ENSGT00940000160354.j.a.b ENSGT00940000156453.b.b ENSGT00940000156037.a.e.c ENSGT00940000155981.h.f ENSGT01050000245154 ENSGT00940000158019.h.a.a ENSGT00390000000568.m ENSGT00950000182909.b.a.a.db.c ENSGT00390000003161.c ENSGT00390000004681.a.a.h #19 ENSGT00950000183014.f.b.b.a.a.h ##22 ENSGT00940000154573.db.b ENSGT00940000156211.a.a.a ENSGT00440000033640.h.c ENSGT00940000162303.a.a.d ENSGT00940000163866.a.b.b ENSGT00940000162937.a.a.b ENSGT00390000010872.n ENSGT00940000166222.a ENSGT00940000157153.x ENSGT00940000167364.c ENSGT00940000157354.i.d ENSGT00940000154843.F.c.b.h ENSGT00390000009122 ENSGT00940000155842.s.d ENSGT00940000156080.l.e Rainbow trout MODERN SPECIES 22 ENSOMYG00000027127 ENSOMYG00000027140 ENSOMYG00000063692 psma8 (ENSOMYG00000027172) ENSOMYG00000027232 aqp4 (ENSOMYG00000027245) cdh2 (ENSOMYG00000027489) ENSOMYG00000028155 ENSOMYG00000028272 ENSOMYG00000028391 ENSOMYG00000029282 ENSOMYG00000031698 ENSOMYG00000031717 ENSOMYG00000050154 ENSOMYG00000031919 #19 ENSOMYG00000032556 ##22 ENSOMYG00000032568 MYLK4 (ENSOMYG00000032600) gmds (ENSOMYG00000032624) foxc1b (ENSOMYG00000032661) ENSOMYG00000077565 ENSOMYG00000032667 foxq1b (ENSOMYG00000032675) exoc2 (ENSOMYG00000032814) ENSOMYG00000032871 ENSOMYG00000068692 ENSOMYG00000052262 ENSOMYG00000032902 ENSOMYG00000032912 ENSOMYG00000067978 ENSOMYG00000033066 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154930.eb.q ENSGT00940000157285.f.d ENSGT00950000182993.B.a.d.b ENSGT00390000015908 ENSGT00940000160354.j.a.b ENSGT00940000156453.b.b ENSGT00510000049120.l.b ENSGT00940000156037.a.e.c ENSGT00940000155981.h.f ENSGT01050000245154 ENSGT00940000158019.h.a.a ENSGT00390000000568.m ENSGT00950000182909.b.a.a.db.c ENSGT00390000003161.c ENSGT00390000004681.a.a.h #19 ENSGT00950000183014.f.b.b.a.a.h ##22 ENSGT00940000154573.db.b ENSGT00940000156211.a.a.a ENSGT00440000033640.h.c ENSGT00940000162303.a.a.d ENSGT00940000163866.a.b.b ENSGT00940000162937.a.a.b ENSGT00390000010872.n ENSGT00940000166222.a ENSGT00940000157153.x ENSGT00940000167364.c ENSGT00940000157354.i.d ENSGT00940000154843.F.c.b.h ENSGT00390000009122 ENSGT00940000155842.s.d ENSGT00940000156080.l.e Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES med8 (ENSOTSG00005038805) SZT2 (ENSOTSG00005038814) ptprfa (ENSOTSG00005039083) ENSOTSG00005047248 st3gal3a (ENSOTSG00005047280) ENSOTSG00005047281 psma8 (ENSOTSG00005047283) ENSOTSG00005047284 aqp4 (ENSOTSG00005047285) cdh2 (ENSOTSG00005047313) ENSOTSG00005047614 b4galt6 (ENSOTSG00005047623) TRAPPC8 (ENSOTSG00005047631) ENSOTSG00005047633 GFUS (ENSOTSG00005047635) #19 ENSOTSG00005047651 ##22 SERPINB1 (ENSOTSG00005047652) ENSOTSG00005047653 foxc1b (ENSOTSG00005000065) ENSOTSG00005000104 foxq1b (ENSOTSG00005000166) exoc2 (ENSOTSG00005000187) ENSOTSG00005000193 ENSOTSG00005000196 ENSOTSG00005000197 SLC22A23 (ENSOTSG00005000199) DSP (ENSOTSG00005000216) tbc1d7 (ENSOTSG00005000619) ENSOTSG00005000625 sirt5 (ENSOTSG00005000631) igfbp1a (ENSOTSG00005000638) Chinook salmon MODERN SPECIES 2928 ptprfa (ENSOTSG00005031991) ENSOTSG00005032119 st3gal3a (ENSOTSG00005032472) ENSOTSG00005032473 psma8 (ENSOTSG00005032475) ENSOTSG00005032495 aqp4 (ENSOTSG00005032496) cdh2 (ENSOTSG00005032512) ENSOTSG00005039160 b4galt6 (ENSOTSG00005039268) TRAPPC8 (ENSOTSG00005039754) ENSOTSG00005040042 GFUS (ENSOTSG00005040050) #19 ENSOTSG00005040839 ##22 SERPINB1 (ENSOTSG00005040863) ENSOTSG00005040865 Coho salmon MODERN SPECIES 1 st3gal3a (ENSOKIG00005018939) ENSOKIG00005018983 ENSOKIG00005018997 ENSOKIG00005019024 ENSOKIG00005019108 ENSOKIG00005019132 aqp4 (ENSOKIG00005019141) cdh2 (ENSOKIG00005019360) ENSOKIG00005023572 ENSOKIG00005023580 B4GALT5 (ENSOKIG00005023624) TRAPPC8 (ENSOKIG00005023849) ENSOKIG00005024223 ARHGAP39 (ENSOKIG00005024242) GFUS (ENSOKIG00005024330) #19 ENSOKIG00005024387 ##22 SERPINB1 (ENSOKIG00005024415) MYLK4 (ENSOKIG00005024435) gmds (ENSOKIG00005024457) ENSOKIG00005024584 foxc1b (ENSOKIG00005024591) ENSOKIG00005024594 foxq1b (ENSOKIG00005024601) exoc2 (ENSOKIG00005024662) ENSOKIG00005024821 ENSOKIG00005024838 ENSOKIG00005024843 SLC22A23 (ENSOKIG00005024852) DSP (ENSOKIG00005024957) tbc1d7 (ENSOKIG00005027178) PHACTR1 (ENSOKIG00005027204) Northern pike MODERN SPECIES 7 ENSELUG00000002204 dsc2l (ENSELUG00000002197) ENSELUG00000002186 ttr (ENSELUG00000000062) b4galt6 (ENSELUG00000002166) opn7a (ENSELUG00000002161) ENSELUG00000034701 TRAPPC8 (ENSELUG00000002149) ENSELUG00000002121 mep1ba (ENSELUG00000000058) mcm3l (ENSELUG00000002112) ARHGAP39 (ENSELUG00000002107) GFUS (ENSELUG00000002100) #19 bmb (ENSELUG00000002084) pycr3 (ENSELUG00000002076) #20 ENSELUG00000002069 ##22 cahz (ENSELUG00000002055) serpinb1 (ENSELUG00000002049) MYLK4 (ENSELUG00000002040) gmds (ENSELUG00000002034) ENSELUG00000033999 foxc1b (ENSELUG00000002021) ENSELUG00000002020 foxq1b (ENSELUG00000001117) exoc2 (ENSELUG00000002012) ENSELUG00000001984 ENSELUG00000001975 BPHL (ENSELUG00000001972) ENSELUG00000001968 ENSELUG00000001962 SLC22A23 (ENSELUG00000001966) Otomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.a.a ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.a.a ##22 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 270 ENSDCDG00000013825 pycr3 (ENSDCDG00000013833) #20 GFUS (ENSDCDG00000013848) #19 ARHGAP39 (ENSDCDG00000013984) C8orf82 (ENSDCDG00000014004) naprt (ENSDCDG00000014019) #23 ENSDCDG00000014050 aqp4 (ENSDCDG00000014059) naprt (ENSDCDG00000014068) #23 C8orf82 (ENSDCDG00000014085) ARHGAP39 (ENSDCDG00000014100) GFUS (ENSDCDG00000014121) #19 ENSDCDG00000014139 ENSDCDG00000014151 ENSDCDG00000014162 ENSDCDG00000014170 ##22 Denticle herring MODERN SPECIES 270 ENSDCDG00000014162 ENSDCDG00000014151 ENSDCDG00000014139 GFUS (ENSDCDG00000014121) #19 ARHGAP39 (ENSDCDG00000014100) C8orf82 (ENSDCDG00000014085) naprt (ENSDCDG00000014068) #23 aqp4 (ENSDCDG00000014059) ENSDCDG00000014050 naprt (ENSDCDG00000014019) #23 C8orf82 (ENSDCDG00000014004) ARHGAP39 (ENSDCDG00000013984) GFUS (ENSDCDG00000013848) #19 pycr3 (ENSDCDG00000013833) #20 ENSDCDG00000013825 ENSDCDG00000013820 ##22 ENSDCDG00000013809 serpinb1l2 (ENSDCDG00000013760) MYLK4 (ENSDCDG00000013739) gmds (ENSDCDG00000013723) ENSDCDG00000013864 ENSDCDG00000013855 ENSDCDG00000013849 tbc1d7 (ENSDCDG00000013823) ENSDCDG00000013817 TGM1 (ENSDCDG00000013764) lmx1a (ENSDCDG00000013754) ENSDCDG00000013750 exoc2 (ENSDCDG00000013742) ENSDCDG00000013738 ENSDCDG00000013737 Neopterygii ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES 1126 ENSGT00390000004681.b #19 ENSGT00950000183014.f.b.b.a.b ##22 Clupeocephala ANCESTRAL SPECIES 85 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00950000182977.B.b.a.d ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324 ENSGT00390000016277.b ENSGT01050000244939.a.a.b.a.a ENSGT00390000004964 ENSGT00940000160062.a ENSGT00980000198654 ENSGT00940000157990.a.a ENSGT00940000159567.a.a ENSGT00940000157841 Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.a.b.a ##22 Otophysi ANCESTRAL SPECIES 16 ENSGT00830000128368.a ENSGT00940000162464 ENSGT00940000157407 ENSGT00390000016736.b ENSGT00390000006681 ENSGT00940000167697 ENSGT00390000011405 ENSGT00940000157671 ENSGT00950000183093.C ENSGT00940000153837.a.a #27 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.b #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a ##22 ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000155842.s ENSGT00940000155842.t.x ENSGT00390000009122 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000166222.h.b ENSGT00940000155141.w.a ENSGT00940000175851 ENSGT00940000166128 ENSGT00390000016034 ENSGT00940000158349 Characiphysae ANCESTRAL SPECIES 31 ENSGT00940000162464 ENSGT00940000157407 ENSGT00390000016736.b ENSGT00390000006681 ENSGT00390000016465 ENSGT00950000182767.a ENSGT00390000011405 ENSGT00940000157671 ENSGT00950000183093.C ENSGT00940000153837.a.a #27 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.b.c #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a ##22 ENSGT00940000164218.ob.b ENSGT00940000155265.b.b ENSGT00940000155842.s ENSGT00940000155842.t.x ENSGT00390000009122 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000166222.h.b ENSGT00940000155141.w.a ENSGT00940000175851 ENSGT00940000166128 ENSGT00390000016034 ENSGT00940000158349 Characiphysae_b ANCESTRAL SPECIES 74 ENSGT00940000162464 ENSGT00940000157407 ENSGT00390000016736.b ENSGT00390000006681 ENSGT00390000016465 ENSGT00950000182767.a ENSGT00390000011405 ENSGT00940000157671 ENSGT00950000183093.C ENSGT00940000153837.a.a #27 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.b.c #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a ##22 ENSGT00940000164218.ob.b ENSGT00940000155265.b.b ENSGT00940000155842.s ENSGT00940000155842.t.x ENSGT00390000009122 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000166222.h.b ENSGT00940000155141.w.a ENSGT00940000166128 ENSGT00390000016034 ENSGT00940000158349 ENSGT00550000074943 Characoidei ANCESTRAL SPECIES 49 ENSGT00830000128368.a ENSGT00940000157407 ENSGT00390000016736.b ENSGT00390000006681 ENSGT00390000016465 ENSGT00950000182767.a ENSGT00390000011405 ENSGT00940000157671 ENSGT00950000183093.C ENSGT00940000153837.a.a #27 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.b.c #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a ##22 ENSGT00940000164218.ob.b ENSGT00940000155265.b.b ENSGT00940000155842.s ENSGT00940000155842.t.x ENSGT00390000009122 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00390000004746 ENSGT00940000166222.h.b ENSGT00940000155141.w.a ENSGT00940000166128 ENSGT00390000016034 ENSGT00940000158349 ENSGT00550000074943 Red-bellied piranha MODERN SPECIES 534 RHPN1 (ENSPNAG00000008008) #27 C8orf82 (ENSPNAG00000000576) ARHGAP39 (ENSPNAG00000000574) GFUS (ENSPNAG00000007972) #19 pycr3 (ENSPNAG00000000558) #20 eef1db (ENSPNAG00000007955) ##22 ENSPNAG00000007927 ENSPNAG00000007892 ENSPNAG00000007886 ENSPNAG00000007880 tbc1d7 (ENSPNAG00000007869) DSP (ENSPNAG00000006717) SLC22A23 (ENSPNAG00000007834) ENSPNAG00000000496 BPHL (ENSPNAG00000007819) ENSPNAG00000007815 ENSPNAG00000000478 GPR6 (ENSPNAG00000000471) WASF1 (ENSPNAG00000007800) Mexicana tetra MODERN SPECIES 18 cdc40 (ENSAMXG00000013725) WASF1 (ENSAMXG00000013526) aida (ENSAMXG00000013465) ENSAMXG00000013444 taf1a (ENSAMXG00000013438) hlx1 (ENSAMXG00000013419) RHPN1 (ENSAMXG00000013406) #27 naprt (ENSAMXG00000013403) #23 ENSAMXG00000033217 C8orf82 (ENSAMXG00000036483) ENSAMXG00000039804 ARHGAP39 (ENSAMXG00000013370) GFUS (ENSAMXG00000041223) #19 ENSAMXG00000037360 pycr3 (ENSAMXG00000030255) #20 eef1db (ENSAMXG00000042563) ##22 ENSAMXG00000030142 ENSAMXG00000013172 ENSAMXG00000030156 disp1 (ENSAMXG00000013118) brox (ENSAMXG00000013074) tshr (ENSAMXG00000012994) ENSAMXG00000041232 nrxn3b (ENSAMXG00000012773) snw1 (ENSAMXG00000009141) ism2b (ENSAMXG00000009150) cyp46a1.3 (ENSAMXG00000009160) ccnk (ENSAMXG00000004860) tmed5 (ENSAMXG00000034419) tmed5 (ENSAMXG00000030932) pigc (ENSAMXG00000035663) Electric eel MODERN SPECIES 4 disp1 (ENSEEEG00000020822) ENSEEEG00000020835 brox (ENSEEEG00000020836) aida (ENSEEEG00000020843) ENSEEEG00000020855 taf1a (ENSEEEG00000020862) DUSP10 (ENSEEEG00000020864) hlx1 (ENSEEEG00000020865) RHPN1 (ENSEEEG00000020866) #27 naprt (ENSEEEG00000020870) #23 C8orf82 (ENSEEEG00000020872) ARHGAP39 (ENSEEEG00000020876) GFUS (ENSEEEG00000020893) #19 ENSEEEG00000020924 pycr3 (ENSEEEG00000020927) #20 eef1db (ENSEEEG00000020928) ##22 ENSEEEG00000020931 ENSEEEG00000020932 ENSEEEG00000020934 ENSEEEG00000020935 tbc1d7 (ENSEEEG00000020937) DSP (ENSEEEG00000020938) SLC22A23 (ENSEEEG00000020940) ENSEEEG00000020942 BPHL (ENSEEEG00000020944) ENSEEEG00000020945 NCOA7 (ENSEEEG00000020948) ctsbb (ENSEEEG00000020976) fdft1 (ENSEEEG00000021012) gata4 (ENSEEEG00000021014) FIG4 (ENSEEEG00000021024) Channel catfish MODERN SPECIES 11 htr1b (ENSIPUG00000008275) mei4 (ENSIPUG00000008268) ENSIPUG00000008239 nfya (ENSIPUG00000008183) ENSIPUG00000008152 nt5e (ENSIPUG00000008104) snx14 (ENSIPUG00000007891) cnr1a (ENSIPUG00000007860) rngtt (ENSIPUG00000007731) pnrc1 (ENSIPUG00000007702) PM20D2 (ENSIPUG00000007679) c2h8orf82 (ENSIPUG00000007667) arhgap39 (ENSIPUG00000007606) TSTA3 (ENSIPUG00000007564) #19 pycrl (ENSIPUG00000007545) #20 eef1d (ENSIPUG00000007494) ##22 ENSIPUG00000007460 ENSIPUG00000007427 tbc1d7 (ENSIPUG00000007381) DSP (ENSIPUG00000007350) slc22a23 (ENSIPUG00000007236) psmg4 (ENSIPUG00000007288) ENSIPUG00000007212 ENSIPUG00000007194 ENSIPUG00000007186 fdft1 (ENSIPUG00000007144) gata4 (ENSIPUG00000007121) fig4 (ENSIPUG00000006925) gpr6 (ENSIPUG00000006906) wasf1 (ENSIPUG00000006830) cdc40 (ENSIPUG00000006762) Cyprinoidei ANCESTRAL SPECIES 57 ENSGT00390000006681 ENSGT00940000167697 ENSGT00950000182767.a.f ENSGT00390000011405 ENSGT00940000157671 ENSGT00390000016465 ENSGT00950000182767.a.e ENSGT00950000183093.C ENSGT00940000153837.a.a #27 ENSGT00940000153456.a #23 ENSGT00390000011521 ENSGT00390000003161 ENSGT00390000004681.b.e #19 ENSGT00390000004681.b.f.a #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a ##22 ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000155842.s ENSGT00390000009122 ENSGT00940000154843.F.c.b ENSGT00940000157354.i ENSGT00940000167364 ENSGT00940000166222.h.b ENSGT00940000155141.w.a ENSGT00940000175851 ENSGT00390000004746 ENSGT00940000166128 ENSGT00390000016034 ENSGT00940000158349 ENSGT00550000074943 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 553 ENSGT00390000004681.b.f.a.a #19 ENSGT00950000183014.f.b.b.a.b.a.a.a ##22 ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000155842.s.g.b ENSGT00940000154843.F.c.b.i ENSGT00940000157354.i.e ENSGT00940000167364.a.b ENSGT00390000004746 ENSGT00940000166222.h.b.b ENSGT00940000155141.w.a.b ENSGT00940000166128 ENSGT00390000016034.`b.b ENSGT00940000158349.m ENSGT00550000074943 ENSGT01060000248564.b.a.a.b.e ENSGT00950000182962.b.b.t.b Cyprininae_a ANCESTRAL SPECIES 392 ENSGT00390000004681.b.f.a.a #19 ENSGT00950000183014.f.b.b.a.b.a.a.a ##22 ENSGT00940000164218 ENSGT00940000155265.b.b ENSGT00940000155842.s.g.b ENSGT00940000154843.F.c.b.i ENSGT00940000157354.i.e ENSGT00940000167364.a.b ENSGT00390000004746 ENSGT00940000166222.h.b.b ENSGT00940000155141.w.a.b ENSGT00940000175851 ENSGT00390000016034.`b.a ENSGT00940000166128 ENSGT00390000016034.`b.b ENSGT00940000158349.m ENSGT00550000074943 Common carp reference MODERN SPECIES 28 ENSCCRG00000062807 tlr5b (ENSCCRG00000075123) disp1 (ENSCCRG00000005185) brox (ENSCCRG00000013248) aida (ENSCCRG00000064444) ENSCCRG00000035032 ENSCCRG00000005515 hlx1 (ENSCCRG00000005544) naprt (ENSCCRG00000005559) #23 ENSCCRG00000005573 ENSCCRG00000043175 ENSCCRG00000068337 gfus.1 (ENSCCRG00000053117) #19 gfus.2 (ENSCCRG00000057308) #19 gfus.2 (ENSCCRG00000065131) #19 eef1db (ENSCCRG00000028541) ##22 ENSCCRG00000028562 ENSCCRG00000037019 ENSCCRG00000014241 ENSCCRG00000068396 ENSCCRG00000058367 ENSCCRG00000012332 ENSCCRG00000047653 ENSCCRG00000071352 ctsbb (ENSCCRG00000047657) ENSCCRG00000047664 gata4 (ENSCCRG00000076261) FIG4 (ENSCCRG00000032517) GPR6 (ENSCCRG00000062256) WASF1 (ENSCCRG00000069905) cdc40 (ENSCCRG00000001583) Goldfish MODERN SPECIES 56 hsp90ab1 (ENSCARG00000055486) rbm25b (ENSCARG00000055250) eif2s1b (ENSCARG00000055213) atp6v1d (ENSCARG00000055143) evlb (ENSCARG00000055055) yy1b (ENSCARG00000055005) ENSCARG00000054999 ENSCARG00000054973 znf410 (ENSCARG00000054944) ENSCARG00000054932 ENSCARG00000054923 ENSCARG00000054873 ARHGAP39 (ENSCARG00000054840) ENSCARG00000054834 gfus.2 (ENSCARG00000054185) #19 eef1db (ENSCARG00000054102) ##22 ENSCARG00000054089 ENSCARG00000054072 PHACTR1 (ENSCARG00000053926) DSP (ENSCARG00000051171) SLC22A23 (ENSCARG00000050883) ENSCARG00000050863 ENSCARG00000050837 ENSCARG00000050833 ctsbb (ENSCARG00000050796) fdft1 (ENSCARG00000050571) gata4 (ENSCARG00000050543) FIG4 (ENSCARG00000047664) GPR6 (ENSCARG00000047528) WASF1 (ENSCARG00000047518) cdc40 (ENSCARG00000047255) Cyprininae ANCESTRAL SPECIES 206 ENSGT00390000016465.sb.b ENSGT00950000182767.a.f ENSGT00390000016465.sb.a ENSGT00950000182767.a.e ENSGT00390000011405 ENSGT00940000157671 ENSGT00950000183093.C.c ENSGT00940000153837.a.a #27 ENSGT00940000153456.a.c #23 ENSGT00390000011521 ENSGT00390000003161.f ENSGT00390000004681.b.e #19 ENSGT00390000004681.b.f.a.b.a #19 ENSGT00390000004681.b.f.a.b.b #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a.a.b ##22 ENSGT00940000155842.s.g.a ENSGT00390000009122 ENSGT00940000154843.F.c.b.j ENSGT00940000157354.i.f ENSGT00940000167364.a.a ENSGT00940000166222.h.b.a ENSGT00940000155141.w.a.a Cyprininae_a ANCESTRAL SPECIES 142 ENSGT00390000006681.e ENSGT00390000016465.sb.a ENSGT00950000182767.a.e ENSGT00390000011405 ENSGT00940000157671.d ENSGT00940000157671.c ENSGT00950000183093.C.c ENSGT00940000153837.a.a #27 ENSGT00940000153456.a.c #23 ENSGT00390000011521 ENSGT00390000003161.f ENSGT00390000004681.b.e #19 ENSGT00390000004681.b.f.a.b.a #19 ENSGT00390000004681.b.f.a.b.b #19 ENSGT00950000183044.a.b #20 ENSGT00950000183014.f.b.b.a.b.a.a.b ##22 ENSGT00940000155842.s.g.a ENSGT00390000009122 ENSGT00940000154843.F.c.b.j ENSGT00940000157354.i.f ENSGT00940000167364.a.a ENSGT00940000166222.h.b.a ENSGT00940000155141.w.a.a ENSGT00940000158349.n ENSGT01060000248564.b.a.a.b.f ENSGT00950000182962.b.b.t.a.a ENSGT00530000063583.b.k ENSGT00390000002881 ENSGT00590000083139.d.b.gb ENSGT00940000158912.i.b ENSGT00940000156528.d.b Common carp reference MODERN SPECIES 34 ENSCCRG00000062054 ENSCCRG00000055125 disp1 (ENSCCRG00000018200) ENSCCRG00000073885 brox (ENSCCRG00000005244) aida (ENSCCRG00000005252) ENSCCRG00000005467 taf1a (ENSCCRG00000005524) DUSP10 (ENSCCRG00000054337) ENSCCRG00000015417 #27 naprt (ENSCCRG00000043181) #23 ENSCCRG00000055371 ENSCCRG00000082065 gfus.2 (ENSCCRG00000005640) #19 pycr3 (ENSCCRG00000073457) #20 eef1db (ENSCCRG00000063093) ##22 ENSCCRG00000055925 tbc1d7 (ENSCCRG00000057167) ENSCCRG00000058558 ENSCCRG00000054388 ENSCCRG00000057564 ENSCCRG00000047558 ENSCCRG00000047583 ENSCCRG00000072281 GPR6 (ENSCCRG00000060730) WASF1 (ENSCCRG00000079243) ENSCCRG00000047170 cdc40 (ENSCCRG00000019697) ENSCCRG00000080347 METTL24 (ENSCCRG00000075264) ENSCCRG00000076315 Goldfish MODERN SPECIES 12 ENSCARG00000039557 ENSCARG00000039544 brox (ENSCARG00000039523) aida (ENSCARG00000039492) ENSCARG00000039404 taf1a (ENSCARG00000039334) DUSP10 (ENSCARG00000039317) RHPN1 (ENSCARG00000039040) #27 ENSCARG00000039020 C8orf82 (ENSCARG00000039003) ARHGAP39 (ENSCARG00000038967) gfus.1 (ENSCARG00000038297) #19 gfus.2 (ENSCARG00000038245) #19 gfus.2 (ENSCARG00000038129) #19 pycr3 (ENSCARG00000038108) #20 eef1db (ENSCARG00000038077) ##22 ENSCARG00000038055 tbc1d7 (ENSCARG00000038044) DSP (ENSCARG00000037651) SLC22A23 (ENSCARG00000037457) ENSCARG00000037445 ENSCARG00000037403 ENSCARG00000037367 fdft1 (ENSCARG00000036696) gata4 (ENSCARG00000036645) GPR6 (ENSCARG00000036611) lin28b (ENSCARG00000036589) RAB10 (ENSCARG00000036574) ENSCARG00000036566 ENSCARG00000036554 bmp2b (ENSCARG00000036539) Cyprininae ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.a.b.a.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.a.b.a.b ##22 Golden-line barbel MODERN SPECIES 586 eef1db (ENSSGRG00000005744) ##22 ENSSGRG00000005743 ENSSGRG00000005738 ENSSGRG00000005736 DSP (ENSSGRG00000005734) SLC22A23 (ENSSGRG00000005729) ENSSGRG00000005723 ENSSGRG00000005721 ENSSGRG00000005718 ENSSGRG00000005712 ctsbb (ENSSGRG00000005710) fdft1 (ENSSGRG00000005707) gata4 (ENSSGRG00000005704) FIG4 (ENSSGRG00000005693) GPR6 (ENSSGRG00000005688) WASF1 (ENSSGRG00000005683) Zebrafish MODERN SPECIES 12 ENSDARG00000095420 ENSDARG00000093457 brox (ENSDARG00000013659) aida (ENSDARG00000014532) ENSDARG00000008184 taf1a (ENSDARG00000052471) DUSP10 (ENSDARG00000052465) hlx1 (ENSDARG00000009134) RHPN1 (ENSDARG00000052454) #27 naprt (ENSDARG00000027930) #23 si:ch1073-287p18.1 (ENSDARG00000075765) ARHGAP39 (ENSDARG00000100007) gfus.1 (ENSDARG00000039666) #19 gfus.2 (ENSDARG00000039669) #19 pycr3 (ENSDARG00000015236) #20 eef1db (ENSDARG00000030053) ##22 ENSDARG00000039652 ENSDARG00000115571 ENSDARG00000113562 ENSDARG00000110807 ENSDARG00000095671 ENSDARG00000111367 ENSDARG00000114229 phactr1 (ENSDARG00000023916) tbc1d7 (ENSDARG00000029581) DSP (ENSDARG00000076673) ctsbb (ENSDARG00000101051) fdft1 (ENSDARG00000101062) gata4 (ENSDARG00000098952) ENSDARG00000101118 ENSDARG00000110451 Otomorpha ANCESTRAL SPECIES 38 ENSGT00520000055637.B ENSGT01030000234613.a.a ENSGT00940000154486.a.b.a.a ENSGT01050000244824.D.b ENSGT01050000244848.C.b ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00950000182977.B.b.a.d ENSGT00980000199825 ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324 ENSGT00390000016277.b ENSGT01050000244939.a.a.b.a.a ENSGT00390000004964 ENSGT00940000160062.a ENSGT01100000263518.C ENSGT00940000159567.a.a Otophysi ANCESTRAL SPECIES 3 ENSGT00520000055637.B ENSGT01030000234613.a.a ENSGT00940000154486.a.b.a.a ENSGT01050000244824.D.b ENSGT01050000244848.C.a.h ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00950000182977.B.b.a.d.c.b ENSGT00950000182977.B.b.a.d.c.a ENSGT00980000199825 ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324.fb ENSGT00390000016277.b ENSGT01050000244939.a.a.b.a.a ENSGT00390000004964 ENSGT00940000162075.a.b ENSGT00990000203615.b.a.a.a.a.g.a.a Characiphysae ANCESTRAL SPECIES 34 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 ENSGT01050000244824.D.b ENSGT01050000244848.C.b ENSGT00940000154774 ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00950000182977.B.b.a.d.c.b ENSGT00950000182977.B.b.a.d.c.a ENSGT00980000199825 ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324.fb ENSGT00390000016277.b ENSGT01050000244939.a.a.b.a.a ENSGT00390000004964 ENSGT00940000162075.a.b ENSGT00990000203615.b.a.a.a.a.g.a.a Channel catfish MODERN SPECIES 12 exoc3 (ENSIPUG00000009925) ahrrb (ENSIPUG00000009907) mcm6l (ENSIPUG00000009388) ENSIPUG00000009312 cul1a (ENSIPUG00000009214) ENSIPUG00000009126 viml (ENSIPUG00000009115) Pde1c (ENSIPUG00000009033) neurod6b (ENSIPUG00000008998) ENSIPUG00000008995 XCR1 (ENSIPUG00000008990) ENSIPUG00000008970 Fyco1 (ENSIPUG00000008914) adcyap1r1a (ENSIPUG00000007953) ghrhra (ENSIPUG00000007835) eef1da (ENSIPUG00000007753) ##22 ENSIPUG00000007716 ftr67 (ENSIPUG00000007662) si:ch73-52e5.2 (ENSIPUG00000007650) them6 (ENSIPUG00000007634) lrrc24 (ENSIPUG00000007618) pigrl3.5 (ENSIPUG00000007605) ENSIPUG00000007599 ENSIPUG00000007569 ENSIPUG00000007542 ENSIPUG00000007532 ENSIPUG00000007510 ENSIPUG00000007490 ENSIPUG00000007465 ENSIPUG00000007442 ENSIPUG00000007402 Characiphysae_b ANCESTRAL SPECIES 50 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 ENSGT01050000244824.D.b ENSGT01050000244848.C.b ENSGT00940000154774 ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 Characoidei ANCESTRAL SPECIES 58 ENSGT00520000055637.B ENSGT01030000234613.a.a ENSGT00940000154486.a.b.a.a ENSGT01050000244824.D.b ENSGT01050000244848.C.b ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00940000178059.a Mexicana tetra MODERN SPECIES 8 ahrrb (ENSAMXG00000034659) mcm6l (ENSAMXG00000036466) ENSAMXG00000038784 cul1a (ENSAMXG00000033832) ENSAMXG00000042650 viml (ENSAMXG00000036556) PDE1C (ENSAMXG00000041175) ENSAMXG00000033952 neurod6b (ENSAMXG00000026500) ENSAMXG00000026491 ENSAMXG00000039747 XCR1 (ENSAMXG00000026490) FYCO1 (ENSAMXG00000002969) adcyap1r1a (ENSAMXG00000035903) ghrhra (ENSAMXG00000043516) eef1da (ENSAMXG00000043611) ##22 ENSAMXG00000040183 ftr67 (ENSAMXG00000000861) si:ch73-52e5.2 (ENSAMXG00000032302) them6 (ENSAMXG00000029116) LRRC24 (ENSAMXG00000041915) ENSAMXG00000040897 ENSAMXG00000042806 ENSAMXG00000034128 ENSAMXG00000036648 ENSAMXG00000001585 ENSAMXG00000037253 ENSAMXG00000031534 ENSAMXG00000034771 cldnj (ENSAMXG00000025932) ENSAMXG00000025933 Red-bellied piranha MODERN SPECIES 711 eef1da (ENSPNAG00000009968) ##22 ENSPNAG00000009903 ftr67 (ENSPNAG00000009881) si:ch73-52e5.2 (ENSPNAG00000009864) them6 (ENSPNAG00000006413) LRRC24 (ENSPNAG00000009846) ENSPNAG00000009831 ENSPNAG00000009818 ENSPNAG00000009806 ENSPNAG00000009798 ENSPNAG00000009785 ENSPNAG00000009760 ENSPNAG00000009747 Electric eel MODERN SPECIES 383 ccr12a (ENSEEEG00000001531) si:ch211-106n13.3 (ENSEEEG00000001535) exoc3 (ENSEEEG00000001541) ahrrb (ENSEEEG00000001559) mcm6l (ENSEEEG00000001583) cul1a (ENSEEEG00000001596) ENSEEEG00000001617 viml (ENSEEEG00000001625) ENSEEEG00000001819 neurod6b (ENSEEEG00000001820) ENSEEEG00000001823 ENSEEEG00000001826 ENSEEEG00000001828 adcyap1r1a (ENSEEEG00000001832) ghrhra (ENSEEEG00000001897) eef1da (ENSEEEG00000001902) ##22 ENSEEEG00000001904 si:ch73-52e5.2 (ENSEEEG00000001908) LRRC24 (ENSEEEG00000001909) Cyprinoidei ANCESTRAL SPECIES 69 ENSGT00940000153769.B ENSGT00520000055637.B ENSGT01030000234613.a.a ENSGT00940000154486.a.b.a.a.c ENSGT01050000244824.D.b.hb.a ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00950000182977.B.b.a.d.c.b.a ENSGT00950000182977.B.b.a.d.c.b.b ENSGT00950000182977.B.b.a.d.c.a.j ENSGT00980000199825 ENSGT00950000182977.B.b.a.d.c.a.i ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324.fb ENSGT00390000016277.b ENSGT01050000244939.a.a.b.a.a ENSGT01030000234918.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 142 ENSGT01050000244824.D.b.hb.b ENSGT00940000154774.y.b ENSGT00940000154516.a.a.l ENSGT00940000156146.`b.b.a ENSGT00940000155331.A.f.a ENSGT00940000159827.e.b ENSGT01090000260052.a.a.a.a.y ENSGT01090000260052.a.b.i.a ENSGT00940000154044.a.a.q.b.b ENSGT00940000157362.c.b ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b.a ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f.a.a ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b.a.a ENSGT00390000004859.c.h ENSGT00390000004859.d.b ENSGT00940000160141.c ENSGT00950000182977.B.b.a.d.c.b.a.b ENSGT00950000182977.B.b.a.d.c.a.j.a.a.b ENSGT00980000199825 ENSGT00950000182977.B.b.a.d.c.a.j.a.a.a.a ENSGT00950000182977.B.b.a.d.c.b.b.b ENSGT00950000182977.B.b.a.d.c.a.j.b ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324.fb ENSGT00390000016277.b.h ENSGT01050000244939.a.a.b.a.a.a Goldfish DUPLICATION Goldfish MODERN SPECIES 2985 eef1da (ENSCARG00000052792) ##22 ENSCARG00000052767 ftr67 (ENSCARG00000052739) si:ch73-52e5.2 (ENSCARG00000052722) them6 (ENSCARG00000052712) LRRC24 (ENSCARG00000052708) pigrl4.2 (ENSCARG00000052683) ENSCARG00000052696 ENSCARG00000070431 Goldfish MODERN SPECIES 3063 XCR1 (ENSCARG00000044171) FYCO1 (ENSCARG00000044101) adcyap1r1a (ENSCARG00000043429) ghrhra (ENSCARG00000043178) eef1da (ENSCARG00000043085) ##22 ENSCARG00000043064 ftr67 (ENSCARG00000043048) them6 (ENSCARG00000043031) LRRC24 (ENSCARG00000043013) ENSCARG00000042950 Cyprininae_a ANCESTRAL SPECIES 59 ENSGT00940000153769.B ENSGT00520000055637.B.m ENSGT01030000234613.a.a.i ENSGT00940000154486.a.b.a.a.c.b ENSGT01050000244824.D.b.hb.b ENSGT00940000154774.y.b ENSGT00940000154516.a.a.l ENSGT00940000156146.`b.b.a ENSGT00940000155331.A.f.a ENSGT00940000159827.e.b ENSGT01090000260052.a.a.a.a.y ENSGT01090000260052.a.b.i.a ENSGT00940000154044.a.a.q.b.b ENSGT00940000157362.c.b ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b.a ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f.a.a ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b.a.a ENSGT00390000004859.c.h ENSGT00390000004859.d.b ENSGT00940000160141.c ENSGT00950000182977.B.b.a.d.c.b.a.b ENSGT00950000182977.B.b.a.d.c.a.j.a.a.b ENSGT00980000199825 ENSGT00950000182977.B.b.a.d.c.a.j.a.a.a.a ENSGT00950000182977.B.b.a.d.c.b.b.b ENSGT00950000182977.B.b.a.d.c.a.j.b ENSGT00950000182977.B.b.a.c.b ENSGT00390000003324.fb ENSGT00390000016277.b.h Common carp reference MODERN SPECIES 29 ENSCCRG00000040737 exoc3 (ENSCCRG00000040748) ahrrb (ENSCCRG00000040791) mcm6l (ENSCCRG00000069854) cul1a (ENSCCRG00000040809) ENSCCRG00000046961 viml (ENSCCRG00000023191) ENSCCRG00000023208 neurod6b (ENSCCRG00000053577) ENSCCRG00000063787 ENSCCRG00000043397 ENSCCRG00000057595 ENSCCRG00000043381 adcyap1r1a (ENSCCRG00000000914) ghrhra (ENSCCRG00000001953) eef1da (ENSCCRG00000001965) ##22 ftr67 (ENSCCRG00000001892) si:ch73-52e5.2 (ENSCCRG00000062659) them6 (ENSCCRG00000001933) ENSCCRG00000001942 ENSCCRG00000076941 pigrl4.2 (ENSCCRG00000001948) ENSCCRG00000078119 ENSCCRG00000067144 ENSCCRG00000011365 abhd4 (ENSCCRG00000013990) ENSCCRG00000033233 ENSCCRG00000033237 ENSCCRG00000033239 ENSCCRG00000002192 crygn1 (ENSCCRG00000002188) Golden-line barbel MODERN SPECIES 279 ahrrb (ENSSGRG00000052000) ENSSGRG00000051999 cul1a (ENSSGRG00000051456) ENSSGRG00000051161 viml (ENSSGRG00000051127) ENSSGRG00000051122 neurod6b (ENSSGRG00000051120) ENSSGRG00000051119 ENSSGRG00000051118 XCR1 (ENSSGRG00000051117) XCR1 (ENSSGRG00000051116) XCR1 (ENSSGRG00000051115) FYCO1 (ENSSGRG00000051111) adcyap1r1a (ENSSGRG00000051042) ghrhra (ENSSGRG00000051038) eef1da (ENSSGRG00000051035) ##22 ENSSGRG00000051031 ftr67 (ENSSGRG00000051029) si:ch73-52e5.2 (ENSSGRG00000051028) them6 (ENSSGRG00000051025) LRRC24 (ENSSGRG00000051024) pigrl4.2 (ENSSGRG00000051023) ENSSGRG00000051022 ENSSGRG00000051021 ENSSGRG00000051020 ENSSGRG00000051018 ENSSGRG00000051016 ENSSGRG00000051015 ENSSGRG00000051013 dad1 (ENSSGRG00000051009) abhd4 (ENSSGRG00000051008) Cyprininae ANCESTRAL SPECIES 63 ENSGT00940000153769.B ENSGT00520000055637.B.n ENSGT01030000234613.a.a.j ENSGT00940000154486.a.b.a.a.c.a ENSGT01050000244824.D.b.hb.a ENSGT00940000154774.y.a ENSGT00940000154516.a.a.k ENSGT00940000156146.`b.b.b ENSGT00940000155331.A.f.b ENSGT00940000159827.e.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.z ENSGT01090000260052.a.b.i.b ENSGT00940000154044.a.a.q.b.a ENSGT00940000157362.c.a ENSGT00950000183014.f.b.b.a.b.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b.a.b ENSGT00390000004859.c.g ENSGT00390000004859.d.a ENSGT00940000160141.d ENSGT00950000182977.B.b.a.d.c.b.a.a ENSGT00950000182977.B.b.a.d.c.a.j.a.a.a.b ENSGT00950000182977.B.b.a.d.c.a.i Cyprininae_a ANCESTRAL SPECIES 168 ENSGT01090000260052.b.b.a.j ENSGT00520000055637.B.n ENSGT01030000234613.a.a.j ENSGT00940000154486.a.b.a.a.c.a ENSGT01050000244824.D.b.hb.a ENSGT00940000154774.y.a ENSGT00940000154516.a.a.k ENSGT00940000156146.`b.b.b ENSGT00940000155331.A.f.b ENSGT00940000159827.e.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.z ENSGT01090000260052.a.b.i.b ENSGT00940000154044.a.a.q.b.a ENSGT00940000157362.c.a ENSGT00950000183014.f.b.b.a.b.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b.a.b ENSGT00390000004859.c.g ENSGT00390000004859.d.a ENSGT00940000160141.d ENSGT00950000182977.B.b.a.d.c.b.a.a ENSGT00950000182977.B.b.a.d.c.b.b.a ENSGT00950000182977.B.b.a.d.c.a.j.a.b Common carp reference MODERN SPECIES 21 ccr12a (ENSCCRG00000057522) ENSCCRG00000025800 ENSCCRG00000079358 exoc3 (ENSCCRG00000025813) ahrrb (ENSCCRG00000061774) cul1a (ENSCCRG00000061481) ENSCCRG00000041052 viml (ENSCCRG00000001489) ENSCCRG00000020351 neurod6b (ENSCCRG00000068095) ENSCCRG00000060514 ENSCCRG00000020364 ENSCCRG00000020365 ENSCCRG00000032439 adcyap1r1a (ENSCCRG00000044459) eef1da (ENSCCRG00000067454) ##22 ENSCCRG00000001880 ftr67 (ENSCCRG00000069833) si:ch73-52e5.2 (ENSCCRG00000001918) ENSCCRG00000001937 pigrl4.2 (ENSCCRG00000079839) ENSCCRG00000020678 ENSCCRG00000018948 dad1 (ENSCCRG00000014002) abhd4 (ENSCCRG00000029455) ENSCCRG00000012598 ENSCCRG00000056657 ENSCCRG00000033243 ENSCCRG00000063979 crygn1 (ENSCCRG00000033245) ENSCCRG00000045182 Golden-line barbel MODERN SPECIES 262 si:ch211-106n13.3 (ENSSGRG00000010200) exoc3 (ENSSGRG00000010193) ahrrb (ENSSGRG00000010191) mcm6l (ENSSGRG00000010190) cul1a (ENSSGRG00000009171) ENSSGRG00000005336 viml (ENSSGRG00000005253) ENSSGRG00000000524 neurod6b (ENSSGRG00000000437) ENSSGRG00000000436 ENSSGRG00000000435 ENSSGRG00000000434 XCR1 (ENSSGRG00000000433) ENSSGRG00000000428 adcyap1r1a (ENSSGRG00000000330) eef1da (ENSSGRG00000000267) ##22 si:ch73-52e5.2 (ENSSGRG00000000240) them6 (ENSSGRG00000000235) LRRC24 (ENSSGRG00000000229) ENSSGRG00000000223 ENSSGRG00000000217 slc47a2.1 (ENSSGRG00000000181) slc47a2.2 (ENSSGRG00000000133) med31 (ENSSGRG00000000106) slc13a5a (ENSSGRG00000000081) ENSSGRG00000045972 Goldfish DUPLICATION Goldfish MODERN SPECIES 11 ENSCARG00000017963 ENSCARG00000017973 ENSCARG00000017979 ENSCARG00000017988 ENSCARG00000018000 ENSCARG00000018018 pigrl4.2 (ENSCARG00000018029) LRRC24 (ENSCARG00000018052) them6 (ENSCARG00000018060) si:ch73-52e5.2 (ENSCARG00000018069) ftr67 (ENSCARG00000018080) ENSCARG00000018088 eef1da (ENSCARG00000018098) ##22 adcyap1r1a (ENSCARG00000018141) ENSCARG00000018282 eef1da (ENSCARG00000018300) ##22 ENSCARG00000018345 ftr67 (ENSCARG00000018353) si:ch73-52e5.2 (ENSCARG00000018363) them6 (ENSCARG00000018370) LRRC24 (ENSCARG00000018385) pigrl4.2 (ENSCARG00000018391) FYCO1 (ENSCARG00000018397) ENSCARG00000018411 neurod6b (ENSCARG00000018416) ENSCARG00000018452 viml (ENSCARG00000018653) ENSCARG00000018709 cul1a (ENSCARG00000019479) ahrrb (ENSCARG00000019572) exoc3 (ENSCARG00000019583) Goldfish MODERN SPECIES 11 ENSCARG00000018709 viml (ENSCARG00000018653) ENSCARG00000018452 neurod6b (ENSCARG00000018416) ENSCARG00000018411 FYCO1 (ENSCARG00000018397) pigrl4.2 (ENSCARG00000018391) LRRC24 (ENSCARG00000018385) them6 (ENSCARG00000018370) si:ch73-52e5.2 (ENSCARG00000018363) ftr67 (ENSCARG00000018353) ENSCARG00000018345 eef1da (ENSCARG00000018300) ##22 ENSCARG00000018282 adcyap1r1a (ENSCARG00000018141) eef1da (ENSCARG00000018098) ##22 ENSCARG00000018088 ftr67 (ENSCARG00000018080) si:ch73-52e5.2 (ENSCARG00000018069) them6 (ENSCARG00000018060) LRRC24 (ENSCARG00000018052) pigrl4.2 (ENSCARG00000018029) ENSCARG00000018018 ENSCARG00000018000 ENSCARG00000017988 ENSCARG00000017979 ENSCARG00000017973 ENSCARG00000017963 ENSCARG00000017928 ENSCARG00000017912 ENSCARG00000017901 Zebrafish MODERN SPECIES 11 ENSDARG00000067950 exoc3 (ENSDARG00000014582) ahrrb (ENSDARG00000052618) mcm6l (ENSDARG00000033231) cul1a (ENSDARG00000019239) cntnap2b (ENSDARG00000074558) viml (ENSDARG00000044501) PDE1C (ENSDARG00000090398) neurod6b (ENSDARG00000020794) ENSDARG00000058774 XCR1 (ENSDARG00000052988) FYCO1 (ENSDARG00000078022) adcyap1r1a (ENSDARG00000105201) ghrhra (ENSDARG00000104961) ENSDARG00000102151 eef1da (ENSDARG00000102291) ##22 ENSDARG00000102557 ftr67 (ENSDARG00000098820) THEM6 (ENSDARG00000103914) them6 (ENSDARG00000100260) LRRC24 (ENSDARG00000101704) pigrl4.2 (ENSDARG00000103852) ENSDARG00000101360 ENSDARG00000103678 ENSDARG00000098216 pigrl3.5 (ENSDARG00000099938) ENSDARG00000098106 ENSDARG00000103964 ENSDARG00000101129 ENSDARG00000100258 ENSDARG00000103575 Clupeiformes ANCESTRAL SPECIES 254 ENSGT00940000153769.B ENSGT00520000055637.B ENSGT01030000234613.a.a ENSGT00940000154486.a.b.a.a ENSGT01050000244824.D.b ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000160141 ENSGT00950000182977.B.b.a.d ENSGT00980000199825 Atlantic herring MODERN SPECIES 14 ahrrb (ENSCHAG00000014574) mcm6l (ENSCHAG00000014132) cul1a (ENSCHAG00000013820) ENSCHAG00000011332 viml (ENSCHAG00000011253) ENSCHAG00000009694 neurod6b (ENSCHAG00000009634) ENSCHAG00000009613 XCR1 (ENSCHAG00000009588) ENSCHAG00000009569 ENSCHAG00000009566 XCR1 (ENSCHAG00000009561) FYCO1 (ENSCHAG00000009510) adcyap1r1a (ENSCHAG00000004677) ghrhra (ENSCHAG00000004278) eef1da (ENSCHAG00000004083) ##22 ENSCHAG00000004028 ftr67 (ENSCHAG00000004017) si:ch73-52e5.2 (ENSCHAG00000004002) them6 (ENSCHAG00000003983) LRRC24 (ENSCHAG00000003964) ENSCHAG00000003927 ENSCHAG00000003891 ENSCHAG00000003851 ENSCHAG00000003799 ENSCHAG00000003736 abhd4 (ENSCHAG00000003679) TGM1 (ENSCHAG00000001509) ap1s3b (ENSCHAG00000001347) scg2b (ENSCHAG00000001332) RAP2B (ENSCHAG00000001326) Denticle herring MODERN SPECIES 14 si:ch211-106n13.3 (ENSDCDG00000017025) ENSDCDG00000017016 exoc3 (ENSDCDG00000016986) ENSDCDG00000016981 mcm6l (ENSDCDG00000016979) cul1a (ENSDCDG00000016920) ENSDCDG00000015983 viml (ENSDCDG00000015344) ENSDCDG00000015171 ENSDCDG00000015132 ENSDCDG00000015124 XCR1 (ENSDCDG00000015117) FYCO1 (ENSDCDG00000015098) adcyap1r1a (ENSDCDG00000014351) ghrhra (ENSDCDG00000014007) eef1da (ENSDCDG00000013926) ##22 ENSDCDG00000013910 ftr67 (ENSDCDG00000013902) si:ch73-52e5.2 (ENSDCDG00000013895) them6 (ENSDCDG00000013890) LRRC24 (ENSDCDG00000013883) sdr39u1 (ENSDCDG00000018434) HBE1 (ENSDCDG00000018432) ENSDCDG00000018429 ENSDCDG00000018428 CCNL1 (ENSDCDG00000018407) ENSDCDG00000018393 PAK2 (ENSDCDG00000016785) ing5b (ENSDCDG00000016746) tgfbr1a (ENSDCDG00000016376) col15a1b (ENSDCDG00000016352) Euteleosteomorpha ANCESTRAL SPECIES 97 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d Protacanthopterygii ANCESTRAL SPECIES 400 ENSGT01100000263556.a.a.p.a ENSGT00950000183014.f.b.b.a.b ##22 Salmoninae ANCESTRAL SPECIES 1540 ENSGT01100000263556.a.a.p.a ENSGT00950000183014.f.b.b.a.b ##22 Salmoninae_a ANCESTRAL SPECIES 51 ENSGT00940000159123.a ENSGT00390000003289.m.a ENSGT00940000157341.g ENSGT00550000074817.v ENSGT00450000040296 ENSGT00940000159827.e ENSGT01090000260052.a.b.i ENSGT01100000263556.a.a.p.a ENSGT00950000183014.f.b.b.a.b ##22 ENSGT00390000010316 ENSGT00940000156882 ENSGT00390000016988.b ENSGT00390000015228 ENSGT00390000018786 ENSGT00940000155682.g.b.c ENSGT00940000154149.b.a.g.a ENSGT00390000003574.b ENSGT00940000159466.f ENSGT00390000005318.a.a.b ENSGT00940000156470.u.b.d ENSGT00940000154587.a.b.v ENSGT00940000156207.b.c.a.b.a.a.a ENSGT00390000010157.a ENSGT00520000060044 Salmo ANCESTRAL SPECIES 21 ENSGT00390000003289.m.a ENSGT00940000157341.g ENSGT00550000074817.v ENSGT00450000040296.q ENSGT00940000159827.e ENSGT01090000260052.a.b.i ENSGT01100000263556.a.a.p.a ENSGT00950000183014.f.b.b.a.b ##22 ENSGT00390000010316 ENSGT00940000156882 ENSGT00390000016988.a.a.a.b.c ENSGT00390000015228 ENSGT00390000018786 ENSGT00940000155682.g.b.c ENSGT00940000154499.hb.b ENSGT00940000154149.b.a.g.a ENSGT00390000003574.b ENSGT00940000159466.f ENSGT00390000005318.a.a.b ENSGT00940000156470.u.b.d ENSGT00940000154587.a.b.v ENSGT00940000156207.b.c.a.b.a.a.a ENSGT00390000010157.a River trout MODERN SPECIES 13 tmem236 (ENSSTUG00000008485) stam (ENSSTUG00000007833) adcyap1b (ENSSTUG00000007685) clul1 (ENSSTUG00000007676) colec12 (ENSSTUG00000007660) rgs20 (ENSSTUG00000007650) ENSSTUG00000007641 atp6v1h (ENSSTUG00000007406) oprk1 (ENSSTUG00000007346) ENSSTUG00000007301 bag1 (ENSSTUG00000007290) neurod6b (ENSSTUG00000007286) XCR1 (ENSSTUG00000007283) ENSSTUG00000007272 ENSSTUG00000007229 ##22 ndufb3 (ENSSTUG00000007219) pecr (ENSSTUG00000007212) ENSSTUG00000007203 ENSSTUG00000007173 zgc:162816 (ENSSTUG00000007152) COL6A2 (ENSSTUG00000007125) rnf2 (ENSSTUG00000007110) ENSSTUG00000007104 ENSSTUG00000007018 kifap3b (ENSSTUG00000006848) prrx1a (ENSSTUG00000006833) mfsd12a (ENSSTUG00000006728) csnk1g2a (ENSSTUG00000006517) mknk2a (ENSSTUG00000005779) ENSSTUG00000005743 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000087565 slc25a24l (ENSSSAG00000043252) fubp1 (ENSSSAG00000032861) ENSSSAG00000101262 usp33 (ENSSSAG00000101623) ENSSSAG00000116330 zzz3 (ENSSSAG00000094968) pigk (ENSSSAG00000115850) ST6GALNAC5 (ENSSSAG00000093729) oprk1 (ENSSSAG00000089257) ENSSSAG00000012543 bag1 (ENSSSAG00000095448) vath (ENSSSAG00000115585) ENSSSAG00000102794 ENSSSAG00000121553 ENSSSAG00000006077 ##22 ENSSSAG00000006051 pecr (ENSSSAG00000006003) ENSSSAG00000005944 ENSSSAG00000005923 ENSSSAG00000111495 ENSSSAG00000005914 ENSSSAG00000010340 ENSSSAG00000102193 ENSSSAG00000112044 ENSSSAG00000114011 rnf2 (ENSSSAG00000093859) ENSSSAG00000047151 kifap3b (ENSSSAG00000110039) prrx1a (ENSSSAG00000104687) mfsd12a (ENSSSAG00000120062) Oncorhynchus ANCESTRAL SPECIES 46 ENSGT00940000159123.a ENSGT00390000003289.m.a ENSGT00940000157341.g ENSGT00550000074817.v ENSGT00450000040296 ENSGT00940000159827.e ENSGT01090000260052.a.b.i ENSGT01100000263556.a.a.p.a ENSGT00950000183014.f.b.b.a.b ##22 ENSGT00390000010316 ENSGT00940000156882 ENSGT00390000016988.b ENSGT00390000015228 ENSGT00390000018786 ENSGT00940000155682.g.b.c ENSGT00940000162889.e.d ENSGT00940000154499.hb.d ENSGT00940000154149.b.a.g.a ENSGT00390000003574.b ENSGT00940000159466.f ENSGT00390000005318.a.a.b ENSGT00940000156470.u.b.d ENSGT00940000154587.a.b.v ENSGT00940000156207.b.c.a.b.a.a.a Oncorhynchus_a ANCESTRAL SPECIES 124 ENSGT00940000159123.a ENSGT00390000003289.m.a ENSGT00940000157341.g ENSGT00550000074817.v ENSGT00450000040296 ENSGT00940000159827.e ENSGT01090000260052.a.b.i ENSGT00950000183014.f.b.b.a.b ##22 ENSGT00390000010316 ENSGT00940000156882 ENSGT00390000016988.b ENSGT00390000015228 ENSGT00390000018786 ENSGT00940000155682.g.b.c ENSGT00940000162889.e.d ENSGT00940000154499.hb.d ENSGT00940000154149.b.a.g.a ENSGT00390000003574.b ENSGT00940000159466.f ENSGT00390000005318.a.a.b ENSGT00940000156470.u.b.d ENSGT00940000154587.a.b.v ENSGT00940000156207.b.c.a.b.a.a.a Coho salmon MODERN SPECIES 23 ENSOKIG00005033831 ENSOKIG00005033817 ENSOKIG00005033805 ENSOKIG00005033794 rgs20 (ENSOKIG00005033785) atp6v1h (ENSOKIG00005033648) oprk1 (ENSOKIG00005033536) ENSOKIG00005033493 bag1 (ENSOKIG00005033434) ENSOKIG00005033428 NEUROD6 (ENSOKIG00005033423) XCR1 (ENSOKIG00005033419) ENSOKIG00005033361 ##22 ndufb3 (ENSOKIG00005033350) pecr (ENSOKIG00005033339) ENSOKIG00005033276 ENSOKIG00005032991 zgc:162816 (ENSOKIG00005032965) COL6A2 (ENSOKIG00005032823) COL6A1 (ENSOKIG00005032756) rnf2 (ENSOKIG00005032723) ENSOKIG00005032638 kifap3b (ENSOKIG00005032443) prrx1a (ENSOKIG00005032405) mfsd12a (ENSOKIG00005032281) ENSOKIG00005032008 ENSOKIG00005031961 mknk2a (ENSOKIG00005031885) Northern pike MODERN SPECIES 2 oprk1 (ENSELUG00000008712) atp6v1h (ENSELUG00000008694) rgs20 (ENSELUG00000008646) tcea1 (ENSELUG00000008605) ENSELUG00000031642 ENSELUG00000008416 ENSELUG00000032564 VIM (ENSELUG00000008389) ENSELUG00000008359 neurod6b (ENSELUG00000008341) ENSELUG00000008325 XCR1 (ENSELUG00000008860) FYCO1 (ENSELUG00000000335) adcyap1r1a (ENSELUG00000008793) ENSELUG00000012931 eef1da (ENSELUG00000012922) ##22 ENSELUG00000033377 ftr67 (ENSELUG00000012885) LRRC24 (ENSELUG00000012865) si:ch73-52e5.2 (ENSELUG00000012838) ENSELUG00000012775 casp20 (ENSELUG00000012710) ugt1b7 (ENSELUG00000012681) ndufb3 (ENSELUG00000012669) pecr (ENSELUG00000012660) zgc:171772 (ENSELUG00000000463) CFAP410 (ENSELUG00000033795) ENSELUG00000012606 zgc:162816 (ENSELUG00000012541) COL6A2 (ENSELUG00000012520) ENSELUG00000027054 Acanthomorphata ANCESTRAL SPECIES ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Tiger tail seahorse MODERN SPECIES 331 ENSHCOG00000013790 ENSHCOG00000013807 ENSHCOG00000013816 ENSHCOG00000013819 crygn1 (ENSHCOG00000013827) pter (ENSHCOG00000013846) gpt (ENSHCOG00000013865) ENSHCOG00000013876 gng5 (ENSHCOG00000013881) ssx2ipa (ENSHCOG00000013927) XCR1 (ENSHCOG00000013942) ENSHCOG00000014048 adcyap1r1a (ENSHCOG00000014083) ghrhra (ENSHCOG00000014179) cfap300 (ENSHCOG00000014185) eef1da (ENSHCOG00000014191) ##22 ENSHCOG00000014199 ftr67 (ENSHCOG00000014206) si:ch73-52e5.2 (ENSHCOG00000014208) them6 (ENSHCOG00000014211) ENSHCOG00000014229 zgc:113531 (ENSHCOG00000014253) b4galt2 (ENSHCOG00000000684) atp6v0b (ENSHCOG00000000401) ENSHCOG00000016658 ift22 (ENSHCOG00000016757) ENSHCOG00000016783 ENSHCOG00000016788 ENSHCOG00000016799 gng12a (ENSHCOG00000016808) gadd45aa (ENSHCOG00000016830) Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00390000009724.d ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Ovalentaria ANCESTRAL SPECIES 5 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00940000177599 ENSGT00390000009724.d ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00940000177599 ENSGT00390000009724.d ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Cichlidae ANCESTRAL SPECIES 2 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a.e.b.b.b ENSGT01090000260052.a.a.a.a.e.b.a.a ENSGT01090000260052.a.a.a.a.e.b.a.b ENSGT01090000260052.a.a.a.a.e.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.e.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a.e.b.b.b ENSGT01090000260052.a.a.a.a.e.b.b.a ENSGT01090000260052.a.a.a.a.e.b.a.a ENSGT01090000260052.a.a.a.a.e.b.a.b ENSGT01090000260052.a.b.i.h ENSGT01090000260052.a.a.a.a.e.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.e.a.a.b ENSGT01090000260052.a.b.i.g ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a.e.b.b.b ENSGT01090000260052.a.a.a.a.e.b.b.a ENSGT01090000260052.a.a.a.a.e.b.a.a.c.a ENSGT01090000260052.a.a.a.a.e.b.a.b ENSGT01090000260052.a.b.i.h ENSGT01090000260052.a.a.a.a.e.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.e.a.a.b ENSGT01090000260052.a.b.i.g ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a.e.b.b.b ENSGT01090000260052.a.a.a.a.e.b.b.a ENSGT01090000260052.a.a.a.a.e.b.a.a.c.a ENSGT01090000260052.a.a.a.a.e.b.a.b ENSGT01090000260052.a.b.i.h ENSGT01090000260052.a.a.a.a.e.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.e.a.a.b ENSGT01090000260052.a.b.i.g ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00940000177599 ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h P. nyererei MODERN SPECIES 416 ENSPNYG00000016395 viml (ENSPNYG00000016407) ENSPNYG00000016423 neurod6b (ENSPNYG00000016452) ENSPNYG00000016462 ENSPNYG00000016469 ENSPNYG00000016484 XCR1 (ENSPNYG00000016501) ENSPNYG00000016560 ENSPNYG00000016569 ENSPNYG00000016572 XCR1 (ENSPNYG00000016581) FYCO1 (ENSPNYG00000016588) adcyap1r1a (ENSPNYG00000016667) ghrhra (ENSPNYG00000016929) eef1da (ENSPNYG00000016966) ##22 ENSPNYG00000016996 ftr67 (ENSPNYG00000017006) ENSPNYG00000017016 si:ch73-52e5.2 (ENSPNYG00000017027) them6 (ENSPNYG00000017047) ENSPNYG00000017062 ENSPNYG00000017086 zgc:113531 (ENSPNYG00000017111) b4galt2 (ENSPNYG00000017125) atp6v0b (ENSPNYG00000017157) ENSPNYG00000017334 atp5l (ENSPNYG00000018096) ift22 (ENSPNYG00000018112) ENSPNYG00000018132 CCN1 (ENSPNYG00000018195) Haplochromini_B ANCESTRAL SPECIES 12 ENSGT01090000260052.a.a.a.a.e.b.a.a.c.b ENSGT01090000260052.a.a.a.a.e.b.a.b ENSGT01090000260052.a.b.i.h ENSGT01090000260052.a.a.a.a.e.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a.e.a.a.b ENSGT01090000260052.a.b.i.g ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00940000177599 ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Zebra mbuna MODERN SPECIES 86 ENSMZEG00005023518 ENSMZEG00005023522 ENSMZEG00005023524 ENSMZEG00005023526 ENSMZEG00005023529 XCR1 (ENSMZEG00005023531) ENSMZEG00005023532 ENSMZEG00005023534 ENSMZEG00005023536 ENSMZEG00005023537 ENSMZEG00005023539 XCR1 (ENSMZEG00005023540) FYCO1 (ENSMZEG00005023541) adcyap1r1a (ENSMZEG00005023543) ghrhra (ENSMZEG00005023547) eef1da (ENSMZEG00005023550) ##22 ENSMZEG00005023554 ENSMZEG00005023555 si:ch73-52e5.2 (ENSMZEG00005023556) them6 (ENSMZEG00005023557) ENSMZEG00005023559 ENSMZEG00005023561 zgc:113531 (ENSMZEG00005023564) Eastern happy MODERN SPECIES 9 ENSACLG00000013485 viml (ENSACLG00000013486) ENSACLG00000013730 neurod6b (ENSACLG00000014017) ENSACLG00000014022 ENSACLG00000014049 ENSACLG00000014055 ENSACLG00000014068 ENSACLG00000014071 XCR1 (ENSACLG00000014088) ENSACLG00000014202 XCR1 (ENSACLG00000014221) FYCO1 (ENSACLG00000014237) adcyap1r1a (ENSACLG00000014298) ghrhra (ENSACLG00000014410) eef1da (ENSACLG00000014474) ##22 ENSACLG00000014573 ENSACLG00000014594 si:ch73-52e5.2 (ENSACLG00000014609) them6 (ENSACLG00000014615) ENSACLG00000014618 ENSACLG00000014657 zgc:113531 (ENSACLG00000014687) b4galt2 (ENSACLG00000014772) atp6v0b (ENSACLG00000014786) ENSACLG00000014855 atp5l (ENSACLG00000014881) ift22 (ENSACLG00000014896) ENSACLG00000014926 CCN1 (ENSACLG00000014934) ENSACLG00000014945 Burton s mouthbrooder MODERN SPECIES 271 ENSHBUG00000011439 ENSHBUG00000011428 viml (ENSHBUG00000011419) ENSHBUG00000011362 neurod6b (ENSHBUG00000011214) ENSHBUG00000011209 ENSHBUG00000011198 ENSHBUG00000011187 ENSHBUG00000001079 ENSHBUG00000000297 ENSHBUG00000000294 XCR1 (ENSHBUG00000011139) FYCO1 (ENSHBUG00000011136) adcyap1r1a (ENSHBUG00000011118) ghrhra (ENSHBUG00000011095) eef1da (ENSHBUG00000011015) ##22 ENSHBUG00000010986 ftr67 (ENSHBUG00000010975) si:ch73-52e5.2 (ENSHBUG00000010958) them6 (ENSHBUG00000010952) ENSHBUG00000010936 ENSHBUG00000010918 zgc:113531 (ENSHBUG00000010909) b4galt2 (ENSHBUG00000010889) atp6v0b (ENSHBUG00000010871) ENSHBUG00000010849 ENSHBUG00000010842 ift22 (ENSHBUG00000010825) atp5l (ENSHBUG00000010805) ENSHBUG00000010786 CCN1 (ENSHBUG00000010766) Lyretail cichlid MODERN SPECIES 313 rgs20 (ENSNBRG00000009132) tcea1 (ENSNBRG00000009104) ENSNBRG00000009097 viml (ENSNBRG00000009073) PDE1C (ENSNBRG00000009029) neurod6b (ENSNBRG00000009015) ENSNBRG00000009000 ENSNBRG00000008994 ENSNBRG00000008984 ENSNBRG00000008966 XCR1 (ENSNBRG00000008953) ENSNBRG00000008939 ENSNBRG00000008914 adcyap1r1a (ENSNBRG00000008765) ghrhra (ENSNBRG00000008680) eef1da (ENSNBRG00000008622) ##22 ENSNBRG00000008598 ftr67 (ENSNBRG00000008587) si:ch73-52e5.2 (ENSNBRG00000008570) them6 (ENSNBRG00000008558) ENSNBRG00000008534 ENSNBRG00000008513 zgc:113531 (ENSNBRG00000008492) b4galt2 (ENSNBRG00000008463) atp6v0b (ENSNBRG00000008429) ENSNBRG00000008397 atp5l (ENSNBRG00000008347) ift22 (ENSNBRG00000008327) ENSNBRG00000008316 CCN1 (ENSNBRG00000007936) MCOLN3 (ENSNBRG00000007793) Nile tilapia MODERN SPECIES 9 ENSONIG00000037049 ENSONIG00000033325 ENSONIG00000041636 ENSONIG00000029543 ENSONIG00000039480 ENSONIG00000028229 ENSONIG00000035001 ENSONIG00000021122 ENSONIG00000009264 ENSONIG00000035031 ENSONIG00000021426 XCR1 (ENSONIG00000021427) FYCO1 (ENSONIG00000009266) adcyap1r1a (ENSONIG00000009271) ghrhra (ENSONIG00000009284) eef1da (ENSONIG00000009294) ##22 ENSONIG00000009298 ftr67 (ENSONIG00000035036) si:ch73-52e5.2 (ENSONIG00000009303) them6 (ENSONIG00000009304) ENSONIG00000039246 ENSONIG00000009305 zgc:113531 (ENSONIG00000035884) b4galt2 (ENSONIG00000009307) atp6v0b (ENSONIG00000041659) ENSONIG00000035169 gpr54 (ENSONIG00000009314) atp5l (ENSONIG00000038775) ift22 (ENSONIG00000009316) ENSONIG00000009320 CCN1 (ENSONIG00000009325) Midas cichlid MODERN SPECIES 1163 ENSACIG00000019582 eef1da (ENSACIG00000019566) ##22 ENSACIG00000019557 ENSACIG00000019547 ftr67 (ENSACIG00000019519) si:ch73-52e5.2 (ENSACIG00000019507) them6 (ENSACIG00000019499) ENSACIG00000019492 zgc:113531 (ENSACIG00000019479) b4galt2 (ENSACIG00000019463) atp6v0b (ENSACIG00000019452) kiss1ra (ENSACIG00000019446) atp5l (ENSACIG00000019383) ift22 (ENSACIG00000019370) ENSACIG00000019364 CCN1 (ENSACIG00000019215) ENSACIG00000019190 Pomacentridae ANCESTRAL SPECIES 45 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b Pomacentridae_A ANCESTRAL SPECIES 106 ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.a.b.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b Amphiprion ANCESTRAL SPECIES 121 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b.b.a ENSGT01090000260052.a.a.a.a.i ENSGT01090000260052.a.a.b.b.b ENSGT01090000260052.a.a.a.a.j ENSGT01090000260052.a.a.b.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b Clown anemonefish MODERN SPECIES 1064 neurod6b (ENSAOCG00000016315) ENSAOCG00000016320 ENSAOCG00000016328 ENSAOCG00000016344 ENSAOCG00000016352 XCR1 (ENSAOCG00000016365) FYCO1 (ENSAOCG00000016375) adcyap1r1a (ENSAOCG00000001124) ghrhra (ENSAOCG00000016467) eef1da (ENSAOCG00000016501) ##22 ENSAOCG00000001143 ftr67 (ENSAOCG00000016565) Orange clownfish MODERN SPECIES 1 rgs20 (ENSAPEG00000024553) tcea1 (ENSAPEG00000024556) ENSAPEG00000024560 viml (ENSAPEG00000024562) PDE1C (ENSAPEG00000024569) neurod6b (ENSAPEG00000024573) ENSAPEG00000024576 ENSAPEG00000024577 ENSAPEG00000024578 ENSAPEG00000024579 ENSAPEG00000024581 XCR1 (ENSAPEG00000024584) FYCO1 (ENSAPEG00000024589) adcyap1r1a (ENSAPEG00000024603) ghrhra (ENSAPEG00000024645) eef1da (ENSAPEG00000024651) ##22 ENSAPEG00000024657 si:ch73-52e5.2 (ENSAPEG00000024663) them6 (ENSAPEG00000024665) ENSAPEG00000024666 si:ch73-52e5.2 (ENSAPEG00000024668) them6 (ENSAPEG00000024670) ENSAPEG00000024671 ENSAPEG00000024680 zgc:113531 (ENSAPEG00000024683) b4galt2 (ENSAPEG00000024686) atp6v0b (ENSAPEG00000024689) ENSAPEG00000024699 ENSAPEG00000024704 ift22 (ENSAPEG00000024719) atp5l (ENSAPEG00000024723) Spiny chromis MODERN SPECIES 178 neurod6b (ENSAPOG00000009390) ENSAPOG00000009406 ENSAPOG00000009419 ENSAPOG00000009430 ENSAPOG00000009436 XCR1 (ENSAPOG00000009440) FYCO1 (ENSAPOG00000009450) adcyap1r1a (ENSAPOG00000009522) ghrhra (ENSAPOG00000009609) eef1da (ENSAPOG00000009671) ##22 ENSAPOG00000009691 mibp2 (ENSAPOG00000009699) ftr67 (ENSAPOG00000009724) mad2l2 (ENSAPOG00000009767) tmem82 (ENSAPOG00000009810) SPEN (ENSAPOG00000009853) ENSAPOG00000009876 fam131c (ENSAPOG00000009886) clcnk (ENSAPOG00000009965) hspb7 (ENSAPOG00000009976) ZBTB17 (ENSAPOG00000010030) ddost (ENSAPOG00000010035) plekhm2 (ENSAPOG00000010075) ENSAPOG00000010100 ARHGEF19 (ENSAPOG00000010124) Bicolor damselfish MODERN SPECIES 739 oprk1 (ENSSPAG00000016628) atp6v1h (ENSSPAG00000016575) rgs20 (ENSSPAG00000016563) tcea1 (ENSSPAG00000016524) ENSSPAG00000016505 viml (ENSSPAG00000016477) PDE1C (ENSSPAG00000016438) ENSSPAG00000016410 ENSSPAG00000016403 ENSSPAG00000016396 XCR1 (ENSSPAG00000016394) FYCO1 (ENSSPAG00000016373) ENSSPAG00000016361 adcyap1r1a (ENSSPAG00000016288) ghrhra (ENSSPAG00000016077) eef1da (ENSSPAG00000016035) ##22 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Oryzias ANCESTRAL SPECIES 12 ENSGT00940000153607.a.a ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000165852 ENSGT00950000183036.a.a.h ENSGT00390000007688.a.b ENSGT01100000263525.a.b.b.i ENSGT00940000155265.a.g Oryzias_b ANCESTRAL SPECIES 8 ENSGT00450000040296 ENSGT00940000153607.a.a ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000165852 ENSGT00950000183036.a.a.h ENSGT00390000007688.a.b ENSGT01100000263525.a.b.b.i ENSGT00940000155265.a.g Indian medaka MODERN SPECIES 10 myl12.2 (ENSOMEG00000010839) ENSOMEG00000010816 oprk1 (ENSOMEG00000010781) atp6v1h (ENSOMEG00000010734) ENSOMEG00000010634 tcea1 (ENSOMEG00000010610) ENSOMEG00000010578 viml (ENSOMEG00000000254) PDE1C (ENSOMEG00000010508) neurod6b (ENSOMEG00000010479) FYCO1 (ENSOMEG00000010454) ENSOMEG00000010383 XCR1 (ENSOMEG00000010372) adcyap1r1a (ENSOMEG00000010346) ghrhra (ENSOMEG00000010243) eef1da (ENSOMEG00000010166) ##22 ftr67 (ENSOMEG00000010124) si:ch73-52e5.2 (ENSOMEG00000010102) them6 (ENSOMEG00000010087) zgc:113531 (ENSOMEG00000010066) ENSOMEG00000010046 ENSOMEG00000010024 b4galt2 (ENSOMEG00000009955) atp6v0b (ENSOMEG00000009906) kiss1ra (ENSOMEG00000009876) ift22 (ENSOMEG00000009847) ENSOMEG00000009810 ENSOMEG00000009723 ENSOMEG00000009704 ssx2ipa (ENSOMEG00000009644) gng5 (ENSOMEG00000009602) Javanese ricefish MODERN SPECIES 8 myl12.1 (ENSOJAG00000018695) bag1 (ENSOJAG00000018688) ENSOJAG00000018647 oprk1 (ENSOJAG00000018634) atp6v1h (ENSOJAG00000018517) ENSOJAG00000018481 tcea1 (ENSOJAG00000018449) ENSOJAG00000018441 viml (ENSOJAG00000018433) PDE1C (ENSOJAG00000017449) ENSOJAG00000017315 XCR1 (ENSOJAG00000017308) FYCO1 (ENSOJAG00000017302) adcyap1r1a (ENSOJAG00000015747) ghrhra (ENSOJAG00000015482) eef1da (ENSOJAG00000015417) ##22 ENSOJAG00000015408 ftr67 (ENSOJAG00000015404) si:ch73-52e5.2 (ENSOJAG00000015399) them6 (ENSOJAG00000015388) zgc:113531 (ENSOJAG00000015380) b4galt2 (ENSOJAG00000015360) atp6v0b (ENSOJAG00000015343) kiss1ra (ENSOJAG00000015294) ift22 (ENSOJAG00000015286) ENSOJAG00000015271 ENSOJAG00000015265 ENSOJAG00000015132 ssx2ipa (ENSOJAG00000015119) gpt (ENSOJAG00000014432) mib1 (ENSOJAG00000014334) Oryzias_a ANCESTRAL SPECIES 7 ENSGT00940000156313.c.b ENSGT00940000154982.d ENSGT00940000153607.a.a ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000165852 ENSGT00950000183036.a.a.h ENSGT00390000007688.a.b ENSGT01100000263525.a.b.b.i ENSGT00390000010727 ENSGT00940000161639.f Chinese medaka MODERN SPECIES 823 ghrhra (ENSOSIG00000009783) eef1da (ENSOSIG00000009774) ##22 ENSOSIG00000009762 Japanese Medaka HdrR MODERN SPECIES 8 EMILIN2 (ENSORLG00000017868) ENSORLG00000017866 myom1a (ENSORLG00000017856) bag1 (ENSORLG00000030377) myl12.2 (ENSORLG00000023164) ENSORLG00000025331 ENSORLG00000017844 oprk1 (ENSORLG00000017839) atp6v1h (ENSORLG00000017832) ENSORLG00000022961 tcea1 (ENSORLG00000017823) ENSORLG00000030253 viml (ENSORLG00000017812) adcyap1r1a (ENSORLG00000017774) ghrhra (ENSORLG00000017759) eef1da (ENSORLG00000017750) ##22 ENSORLG00000026690 ftr67 (ENSORLG00000017746) ENSORLG00000017741 them6 (ENSORLG00000030364) zgc:113531 (ENSORLG00000017737) ENSORLG00000024822 b4galt2 (ENSORLG00000027171) atp6v0b (ENSORLG00000017733) ENSORLG00000028224 ift22 (ENSORLG00000017728) ENSORLG00000017726 ENSORLG00000027519 MCOLN3 (ENSORLG00000017722) ssx2ipa (ENSORLG00000017720) gng5 (ENSORLG00000027348) Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000178871 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Poecilia ANCESTRAL SPECIES 16 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 NAME_6 ANCESTRAL SPECIES 11 ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00390000009586 ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a.d ENSGT01090000260052.a.a.a.a.c ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Sailfin molly MODERN SPECIES 2084 eef1da (ENSPLAG00000008296) ##22 ENSPLAG00000008283 ftr67 (ENSPLAG00000008277) si:ch73-52e5.2 (ENSPLAG00000008273) them6 (ENSPLAG00000008269) ENSPLAG00000008260 ENSPLAG00000008251 zgc:113531 (ENSPLAG00000008230) Amazon molly MODERN SPECIES 279 oprk1 (ENSPFOG00000004780) atp6v1h (ENSPFOG00000004825) rgs20 (ENSPFOG00000005013) tcea1 (ENSPFOG00000005100) ENSPFOG00000022875 viml (ENSPFOG00000005176) ENSPFOG00000023095 PDE1C (ENSPFOG00000005478) neurod6b (ENSPFOG00000005949) ENSPFOG00000020357 ENSPFOG00000022398 XCR1 (ENSPFOG00000005956) FYCO1 (ENSPFOG00000005968) adcyap1r1a (ENSPFOG00000006236) ghrhra (ENSPFOG00000006756) eef1da (ENSPFOG00000007178) ##22 ENSPFOG00000024279 ftr67 (ENSPFOG00000007238) si:ch73-52e5.2 (ENSPFOG00000007330) them6 (ENSPFOG00000007342) ENSPFOG00000007363 ENSPFOG00000007383 ENSPFOG00000007394 ENSPFOG00000023009 zgc:113531 (ENSPFOG00000007405) b4galt2 (ENSPFOG00000007417) atp6v0b (ENSPFOG00000007507) kiss1ra (ENSPFOG00000007593) atp5l (ENSPFOG00000007667) ift22 (ENSPFOG00000007671) ENSPFOG00000007681 Guppy MODERN SPECIES 447 ENSPREG00000016031 oprk1 (ENSPREG00000016164) atp6v1h (ENSPREG00000016192) rgs20 (ENSPREG00000016257) tcea1 (ENSPREG00000016279) ENSPREG00000016309 viml (ENSPREG00000016324) PDE1C (ENSPREG00000016350) neurod6b (ENSPREG00000016407) ENSPREG00000016412 ENSPREG00000016417 XCR1 (ENSPREG00000016424) FYCO1 (ENSPREG00000016439) adcyap1r1a (ENSPREG00000016462) ENSPREG00000016490 eef1da (ENSPREG00000016513) ##22 ENSPREG00000016586 ftr67 (ENSPREG00000016598) si:ch73-52e5.2 (ENSPREG00000016609) them6 (ENSPREG00000016623) ENSPREG00000016636 zgc:113531 (ENSPREG00000016665) b4galt2 (ENSPREG00000016706) atp6v0b (ENSPREG00000016741) kiss1ra (ENSPREG00000016761) atp5l (ENSPREG00000016805) ift22 (ENSPREG00000016823) ENSPREG00000016852 CCN1 (ENSPREG00000016890) MCOLN3 (ENSPREG00000016905) ssx2ipa (ENSPREG00000016934) Platyfish MODERN SPECIES 20 ENSXMAG00000016811 oprk1 (ENSXMAG00000028909) atp6v1h (ENSXMAG00000021915) rgs20 (ENSXMAG00000017577) tcea1 (ENSXMAG00000017586) ENSXMAG00000023892 ENSXMAG00000016850 viml (ENSXMAG00000016853) PDE1C (ENSXMAG00000016894) neurod6b (ENSXMAG00000023638) ENSXMAG00000021183 XCR1 (ENSXMAG00000016924) ENSXMAG00000016929 adcyap1r1a (ENSXMAG00000016932) ghrhra (ENSXMAG00000016943) eef1da (ENSXMAG00000016992) ##22 ENSXMAG00000029223 ENSXMAG00000024394 si:ch73-52e5.2 (ENSXMAG00000017001) them6 (ENSXMAG00000017006) ENSXMAG00000029414 ENSXMAG00000022745 zgc:113531 (ENSXMAG00000029935) b4galt2 (ENSXMAG00000017019) atp6v0b (ENSXMAG00000017029) kiss1ra (ENSXMAG00000024710) ift22 (ENSXMAG00000017054) ENSXMAG00000017057 ENSXMAG00000017062 CCN1 (ENSXMAG00000027857) MCOLN3 (ENSXMAG00000017113) NAME_4 ANCESTRAL SPECIES 19 ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b.g ENSGT00940000154044.a.a.q.b.h ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Sheepshead minnow MODERN SPECIES 151 neurod6b (ENSCVAG00000001543) ENSCVAG00000001538 XCR1 (ENSCVAG00000001535) FYCO1 (ENSCVAG00000001527) adcyap1r1a (ENSCVAG00000001495) ghrhra (ENSCVAG00000000057) eef1da (ENSCVAG00000001484) ##22 ENSCVAG00000001481 ftr67 (ENSCVAG00000001474) si:ch73-52e5.2 (ENSCVAG00000001470) them6 (ENSCVAG00000001466) ENSCVAG00000001460 zgc:113531 (ENSCVAG00000001453) b4galt2 (ENSCVAG00000001450) atp6v0b (ENSCVAG00000023279) kiss1ra (ENSCVAG00000023196) atp5l (ENSCVAG00000021486) ift22 (ENSCVAG00000021464) ENSCVAG00000021443 CCN1 (ENSCVAG00000021432) ENSCVAG00000021414 MCOLN3 (ENSCVAG00000021404) Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000178871 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Turquoise killifish MODERN SPECIES 1618 oprk1 (ENSNFUG00015012114) ATP6V1H (ENSNFUG00015012131) rgs20 (ENSNFUG00015012173) TCEA1 (ENSNFUG00015012187) ENSNFUG00015012256 ENSNFUG00015012262 VIML (ENSNFUG00015012268) PDE1C (ENSNFUG00015012434) NEUROD6B (ENSNFUG00015014961) ENSNFUG00015014964 ENSNFUG00015014971 FYCO1 (ENSNFUG00015014999) adcyap1r1a (ENSNFUG00015015356) ENSNFUG00015018779 ghrhra (ENSNFUG00015018788) eef1da (ENSNFUG00015018822) ##22 ENSNFUG00015018853 FTR67 (ENSNFUG00015018859) THEM6 (ENSNFUG00015018861) them6 (ENSNFUG00015018862) ENSNFUG00015018864 OLA.3245 (ENSNFUG00015018866) B4GALT2 (ENSNFUG00015018867) ATP6V0B (ENSNFUG00015018873) ENSNFUG00015018892 RABL5 (ENSNFUG00015019042) ENSNFUG00015019049 BCL10 (ENSNFUG00015019135) MCOLN3 (ENSNFUG00015019147) ENSNFUG00015019169 ssx2ipa (ENSNFUG00015019174) Mangrove rivulus MODERN SPECIES 88 ghrhra (ENSKMAG00000002539) eef1da (ENSKMAG00000002571) ##22 ENSKMAG00000002600 ftr67 (ENSKMAG00000002621) si:ch73-52e5.2 (ENSKMAG00000002629) them6 (ENSKMAG00000002646) ENSKMAG00000002659 ENSKMAG00000002682 zgc:113531 (ENSKMAG00000002692) b4galt2 (ENSKMAG00000002711) atp6v0b (ENSKMAG00000002743) kiss1ra (ENSKMAG00000002766) atp5l (ENSKMAG00000002804) ift22 (ENSKMAG00000002821) ENSKMAG00000002857 CCN1 (ENSKMAG00000002875) ENSKMAG00000002888 Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00390000009724.d ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h Carangaria ANCESTRAL SPECIES 5 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00390000009724.d ENSGT00940000167219 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00390000009724.d ENSGT00940000167219 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Seriola ANCESTRAL SPECIES ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.b ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT01090000260059.b.e.b ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00390000009724.d ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Yellowtail amberjack MODERN SPECIES 2803 ENSSLDG00000015745 oprk1 (ENSSLDG00000015731) atp6v1h (ENSSLDG00000015673) rgs20 (ENSSLDG00000015632) tcea1 (ENSSLDG00000015590) ENSSLDG00000015571 viml (ENSSLDG00000015495) ENSSLDG00000015445 neurod6b (ENSSLDG00000015424) ENSSLDG00000015414 XCR1 (ENSSLDG00000015399) ENSSLDG00000015383 ENSSLDG00000015361 adcyap1r1a (ENSSLDG00000015335) ghrhra (ENSSLDG00000015309) eef1da (ENSSLDG00000015251) ##22 ENSSLDG00000015214 ENSSLDG00000015207 ftr67 (ENSSLDG00000015198) si:ch73-52e5.2 (ENSSLDG00000015184) them6 (ENSSLDG00000015175) ENSSLDG00000015145 ENSSLDG00000015132 zgc:113531 (ENSSLDG00000015113) b4galt2 (ENSSLDG00000015087) atp6v0b (ENSSLDG00000015062) ENSSLDG00000015049 Greater amberjack MODERN SPECIES 99 ENSSDUG00000014099 oprk1 (ENSSDUG00000014173) atp6v1h (ENSSDUG00000014435) rgs20 (ENSSDUG00000014532) tcea1 (ENSSDUG00000014550) ENSSDUG00000014577 viml (ENSSDUG00000014590) PDE1C (ENSSDUG00000014624) neurod6b (ENSSDUG00000014644) ENSSDUG00000014650 ENSSDUG00000014659 XCR1 (ENSSDUG00000014674) FYCO1 (ENSSDUG00000014679) adcyap1r1a (ENSSDUG00000014797) ghrhra (ENSSDUG00000015332) eef1da (ENSSDUG00000015374) ##22 ENSSDUG00000015460 ftr67 (ENSSDUG00000015464) si:ch73-52e5.2 (ENSSDUG00000015490) them6 (ENSSDUG00000015499) ENSSDUG00000015505 ENSSDUG00000015524 ENSSDUG00000015535 zgc:113531 (ENSSDUG00000015553) b4galt2 (ENSSDUG00000015568) atp6v0b (ENSSDUG00000015596) ENSSDUG00000015622 kiss1ra (ENSSDUG00000015645) ENSSDUG00000015657 ift22 (ENSSDUG00000015664) ENSSDUG00000015673 Barramundi perch MODERN SPECIES 69 bag1 (ENSLCAG00010021020) ENSLCAG00010021028 oprk1 (ENSLCAG00010021043) atp6v1h (ENSLCAG00010021067) ENSLCAG00010021105 tcea1 (ENSLCAG00010021112) ENSLCAG00010021117 viml (ENSLCAG00010021126) ENSLCAG00010021193 neurod6b (ENSLCAG00010021488) ENSLCAG00010000258 XCR1 (ENSLCAG00010000264) FYCO1 (ENSLCAG00010000292) adcyap1r1a (ENSLCAG00010000544) ghrhra (ENSLCAG00010000854) eef1da (ENSLCAG00010000870) ##22 ENSLCAG00010000884 ftr67 (ENSLCAG00010000890) si:ch73-52e5.2 (ENSLCAG00010000897) them6 (ENSLCAG00010000902) ENSLCAG00010000907 ENSLCAG00010000916 zgc:113531 (ENSLCAG00010000920) b4galt2 (ENSLCAG00010000924) atp6v0b (ENSLCAG00010000928) kiss1ra (ENSLCAG00010000955) atp5l (ENSLCAG00010001020) ENSLCAG00010001028 ENSLCAG00010001032 CCN1 (ENSLCAG00010001035) ENSLCAG00010001037 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000178871 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00940000167219 ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Turbot MODERN SPECIES 19 bag1 (ENSSMAG00000024840) ENSSMAG00000016725 oprk1 (ENSSMAG00000033971) atp6v1h (ENSSMAG00000016783) rgs20 (ENSSMAG00000016842) tcea1 (ENSSMAG00000016852) ENSSMAG00000033807 viml (ENSSMAG00000016887) ENSSMAG00000016898 neurod6b (ENSSMAG00000032005) ENSSMAG00000016936 ENSSMAG00000016941 ENSSMAG00000016947 adcyap1r1a (ENSSMAG00000016961) ghrhra (ENSSMAG00000016976) eef1da (ENSSMAG00000026770) ##22 ENSSMAG00000017092 ENSSMAG00000033685 ftr67 (ENSSMAG00000017102) si:ch73-52e5.2 (ENSSMAG00000017118) them6 (ENSSMAG00000017123) ENSSMAG00000023122 ENSSMAG00000017130 ENSSMAG00000027505 zgc:113531 (ENSSMAG00000017208) b4galt2 (ENSSMAG00000017247) atp6v0b (ENSSMAG00000017267) kiss1ra (ENSSMAG00000017300) ENSSMAG00000034783 ENSSMAG00000032958 ENSSMAG00000017541 Tongue sole MODERN SPECIES 12 ENSCSEG00000013511 ENSCSEG00000013498 oprk1 (ENSCSEG00000013293) atp6v1h (ENSCSEG00000013242) rgs20 (ENSCSEG00000013237) tcea1 (ENSCSEG00000013218) ENSCSEG00000013209 ENSCSEG00000013203 viml (ENSCSEG00000013186) PDE1C (ENSCSEG00000013147) neurod6b (ENSCSEG00000013142) ENSCSEG00000013137 ENSCSEG00000013112 adcyap1r1a (ENSCSEG00000013096) ghrhra (ENSCSEG00000013084) eef1da (ENSCSEG00000013011) ##22 ENSCSEG00000012902 ftr67 (ENSCSEG00000012871) mib1 (ENSCSEG00000012760) abhd3 (ENSCSEG00000012740) greb1l (ENSCSEG00000012661) ENSCSEG00000012651 rock1 (ENSCSEG00000012561) usp14 (ENSCSEG00000012519) thoc1 (ENSCSEG00000012486) AQP1 (ENSCSEG00000012458) aqp1 (ENSCSEG00000012440) CRHR2 (ENSCSEG00000012395) myl13 (ENSCSEG00000012384) pth1r (ENSCSEG00000012371) tmie (ENSCSEG00000012362) Anabantaria ANCESTRAL SPECIES 8 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h ENSGT00390000007688.a.b Zig-zag eel MODERN SPECIES 8 bag1 (ENSMAMG00000000427) ENSMAMG00000017958 oprk1 (ENSMAMG00000017948) atp6v1h (ENSMAMG00000017908) ENSMAMG00000017897 tcea1 (ENSMAMG00000025641) ENSMAMG00000027949 viml (ENSMAMG00000017824) ENSMAMG00000017774 neurod6b (ENSMAMG00000017763) ENSMAMG00000017749 ENSMAMG00000027032 ENSMAMG00000017733 adcyap1r1a (ENSMAMG00000017704) ghrhra (ENSMAMG00000017689) eef1da (ENSMAMG00000027678) ##22 ftr67 (ENSMAMG00000017659) them6 (ENSMAMG00000017653) ENSMAMG00000025195 ENSMAMG00000017619 zgc:113531 (ENSMAMG00000017613) ENSMAMG00000017603 atp6v0b (ENSMAMG00000017585) ENSMAMG00000017570 ENSMAMG00000027095 ENSMAMG00000017546 ENSMAMG00000017535 ENSMAMG00000017322 ENSMAMG00000017298 ENSMAMG00000017256 ssx2ipa (ENSMAMG00000017241) Anabantoidei ANCESTRAL SPECIES 18 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00980000202693 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 ENSGT00950000183036.a.a.h ENSGT00390000007688.a.b ENSGT01100000263525.a.b.b.i Climbing perch MODERN SPECIES 8 ENSATEG00000025884 bag1 (ENSATEG00000027338) ENSATEG00000001517 oprk1 (ENSATEG00000001556) atp6v1h (ENSATEG00000001581) ENSATEG00000029589 tcea1 (ENSATEG00000001644) ENSATEG00000001690 viml (ENSATEG00000001718) ENSATEG00000001791 ENSATEG00000027009 ENSATEG00000001853 ENSATEG00000001858 adcyap1r1a (ENSATEG00000001887) ghrhra (ENSATEG00000002373) eef1da (ENSATEG00000002422) ##22 ftr67 (ENSATEG00000002449) si:ch73-52e5.2 (ENSATEG00000002484) them6 (ENSATEG00000002492) ENSATEG00000028206 zgc:113531 (ENSATEG00000002514) ENSATEG00000027098 b4galt2 (ENSATEG00000028149) atp6v0b (ENSATEG00000002586) kiss1ra (ENSATEG00000002645) ENSATEG00000003627 ENSATEG00000003659 ENSATEG00000025649 ENSATEG00000003682 ENSATEG00000003692 ssx2ipa (ENSATEG00000003756) Siamese fighting fish MODERN SPECIES 8 bag1 (ENSBSLG00000026599) ENSBSLG00000026600 oprk1 (ENSBSLG00000014674) atp6v1h (ENSBSLG00000014706) rgs20 (ENSBSLG00000014916) tcea1 (ENSBSLG00000014924) ENSBSLG00000014957 viml (ENSBSLG00000015181) PDE1C (ENSBSLG00000015314) neurod6b (ENSBSLG00000015629) ENSBSLG00000015634 ENSBSLG00000015642 FYCO1 (ENSBSLG00000015645) adcyap1r1a (ENSBSLG00000015685) ghrhra (ENSBSLG00000016634) eef1da (ENSBSLG00000016769) ##22 ftr67 (ENSBSLG00000017062) si:ch73-52e5.2 (ENSBSLG00000017103) them6 (ENSBSLG00000017119) ENSBSLG00000017134 ENSBSLG00000017170 zgc:113531 (ENSBSLG00000017190) b4galt2 (ENSBSLG00000017203) atp6v0b (ENSBSLG00000017257) ENSBSLG00000017275 ift22 (ENSBSLG00000017365) ENSBSLG00000017394 CCN1 (ENSBSLG00000017470) ENSBSLG00000017502 ssx2ipa (ENSBSLG00000017642) gng5 (ENSBSLG00000017758) Eupercaria ANCESTRAL SPECIES 24 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00990000210543 ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000178871 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Ballan wrasse MODERN SPECIES 76 oprk1 (ENSLBEG00000015781) atp6v1h (ENSLBEG00000015831) rgs20 (ENSLBEG00000015934) tcea1 (ENSLBEG00000015968) ENSLBEG00000016005 viml (ENSLBEG00000016022) ENSLBEG00000016066 neurod6b (ENSLBEG00000016118) ENSLBEG00000016139 ENSLBEG00000016159 ENSLBEG00000016176 XCR1 (ENSLBEG00000016194) FYCO1 (ENSLBEG00000016217) adcyap1r1a (ENSLBEG00000016263) ghrhra (ENSLBEG00000016309) eef1da (ENSLBEG00000016350) ##22 ENSLBEG00000016429 ftr67 (ENSLBEG00000016450) si:ch73-52e5.2 (ENSLBEG00000016472) them6 (ENSLBEG00000016485) ENSLBEG00000016555 ENSLBEG00000016769 zgc:113531 (ENSLBEG00000016808) b4galt2 (ENSLBEG00000016841) atp6v0b (ENSLBEG00000016878) kiss1ra (ENSLBEG00000016926) ift22 (ENSLBEG00000016974) atp5l (ENSLBEG00000016947) CCN1 (ENSLBEG00000017004) ENSLBEG00000017023 MCOLN3 (ENSLBEG00000017040) Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000178871 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Perciformes ANCESTRAL SPECIES 5 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Cottioidei ANCESTRAL SPECIES 22 ENSGT00940000155308.d ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00650000094871 ENSGT00940000167115 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e Lumpfish MODERN SPECIES 8 ENSCLMG00005016641 bag1 (ENSCLMG00005016639) CHMP5 (ENSCLMG00005016637) oprk1 (ENSCLMG00005016636) atp6v1h (ENSCLMG00005016620) ENSCLMG00005016610 tcea1 (ENSCLMG00005016607) ENSCLMG00005016606 viml (ENSCLMG00005016035) ENSCLMG00005016030 neurod6b (ENSCLMG00005016029) ENSCLMG00005016028 FYCO1 (ENSCLMG00005016002) adcyap1r1a (ENSCLMG00005015533) ghrhra (ENSCLMG00005015529) eef1da (ENSCLMG00005015527) ##22 ENSCLMG00005015524 ftr67 (ENSCLMG00005015523) dmbx1a (ENSCLMG00005015522) nsun4 (ENSCLMG00005015521) ENSCLMG00005015515 pif1 (ENSCLMG00005015514) ptger4c (ENSCLMG00005015497) ENSCLMG00005015495 st3gal3b (ENSCLMG00005015269) ENSCLMG00005015154 ABHD8 (ENSCLMG00005015140) mrpl34 (ENSCLMG00005015137) dda1 (ENSCLMG00005015135) ANO8 (ENSCLMG00005014857) plvapa (ENSCLMG00005014850) Stickleback MODERN SPECIES 2 ENSGACG00000017102 bag1 (ENSGACG00000017104) ENSGACG00000017109 oprk1 (ENSGACG00000017114) atp6v1h (ENSGACG00000017118) rgs20 (ENSGACG00000017139) tcea1 (ENSGACG00000017140) ENSGACG00000017150 viml (ENSGACG00000017151) ENSGACG00000017173 neurod6b (ENSGACG00000017176) XCR1 (ENSGACG00000017177) FYCO1 (ENSGACG00000017179) adcyap1r1a (ENSGACG00000017184) ghrhra (ENSGACG00000017188) eef1da (ENSGACG00000017191) ##22 ENSGACG00000017194 ftr67 (ENSGACG00000017196) si:ch73-52e5.2 (ENSGACG00000017198) them6 (ENSGACG00000017202) ENSGACG00000017203 ENSGACG00000017205 ENSGACG00000017207 zgc:113531 (ENSGACG00000017210) b4galt2 (ENSGACG00000017213) atp6v0b (ENSGACG00000017215) ENSGACG00000017220 ift22 (ENSGACG00000017224) ENSGACG00000017229 CCN1 (ENSGACG00000017235) ENSGACG00000017241 Perciformes_a ANCESTRAL SPECIES 17 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000013187 ENSGT00390000009724.d ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Channel bull blenny MODERN SPECIES 8 bag1 (ENSCGOG00000012140) ENSCGOG00000012157 ENSCGOG00000012303 oprk1 (ENSCGOG00000012408) atp6v1h (ENSCGOG00000012439) rgs20 (ENSCGOG00000013314) tcea1 (ENSCGOG00000013316) ENSCGOG00000013346 viml (ENSCGOG00000013356) ENSCGOG00000013724 ENSCGOG00000013966 XCR1 (ENSCGOG00000013967) ENSCGOG00000013971 adcyap1r1a (ENSCGOG00000014002) ghrhra (ENSCGOG00000016014) eef1da (ENSCGOG00000016025) ##22 ENSCGOG00000016048 ftr67 (ENSCGOG00000016051) si:ch73-52e5.2 (ENSCGOG00000016053) them6 (ENSCGOG00000016056) ENSCGOG00000016057 ENSCGOG00000016064 ENSCGOG00000016069 zgc:113531 (ENSCGOG00000016072) b4galt2 (ENSCGOG00000016078) atp6v0b (ENSCGOG00000016119) kiss1ra (ENSCGOG00000016154) ift22 (ENSCGOG00000016458) atp5l (ENSCGOG00000016459) ENSCGOG00000016461 CCN1 (ENSCGOG00000016472) Pike perch MODERN SPECIES 12 bag1 (ENSSLUG00000002465) ENSSLUG00000002475 oprk1 (ENSSLUG00000002477) atp6v1h (ENSSLUG00000002510) rgs20 (ENSSLUG00000002590) tcea1 (ENSSLUG00000002601) ENSSLUG00000002625 viml (ENSSLUG00000002641) ENSSLUG00000002664 neurod6b (ENSSLUG00000002670) ENSSLUG00000002672 XCR1 (ENSSLUG00000002677) ENSSLUG00000002684 adcyap1r1a (ENSSLUG00000002762) ghrhra (ENSSLUG00000004239) eef1da (ENSSLUG00000004260) ##22 ENSSLUG00000004291 ftr67 (ENSSLUG00000004299) si:ch73-52e5.2 (ENSSLUG00000004307) them6 (ENSSLUG00000004315) ENSSLUG00000004321 ENSSLUG00000004331 ENSSLUG00000004336 zgc:113531 (ENSSLUG00000004345) b4galt2 (ENSSLUG00000004359) atp6v0b (ENSSLUG00000004369) kiss1ra (ENSSLUG00000004416) ift22 (ENSSLUG00000004598) ENSSLUG00000004608 CCN1 (ENSSLUG00000004622) ENSSLUG00000004648 Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000178871 ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 Gilthead seabream MODERN SPECIES 13 atp6v1h (ENSSAUG00010010026) rgs20 (ENSSAUG00010010039) tcea1 (ENSSAUG00010010045) ENSSAUG00010010052 ENSSAUG00010010053 viml (ENSSAUG00010010058) ENSSAUG00010010106 neurod6b (ENSSAUG00010010275) ENSSAUG00010010277 ENSSAUG00010010280 ENSSAUG00010010283 XCR1 (ENSSAUG00010010285) FYCO1 (ENSSAUG00010010295) pacap1A (ENSSAUG00010010329) ghrhra (ENSSAUG00010011288) eef1da (ENSSAUG00010011296) ##22 ENSSAUG00010011313 ftr67 (ENSSAUG00010011317) si:ch73-52e5.2 (ENSSAUG00010011322) them6 (ENSSAUG00010011325) ENSSAUG00010011328 ENSSAUG00010011333 zgc:113531 (ENSSAUG00010011336) b4galt2 (ENSSAUG00010011338) atp6v0b (ENSSAUG00010011339) kiss1ra (ENSSAUG00010011346) ATP5L (ENSSAUG00010011394) ift22 (ENSSAUG00010011397) ENSSAUG00010011400 CCN1 (ENSSAUG00010011403) ENSSAUG00010011404 Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00940000166520.g.a ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 ENSGT00940000157017.b ENSGT00390000009724.d ENSGT00390000013187 ENSGT00530000063497.b ENSGT00940000155151.b.e ENSGT00940000165852 European seabass MODERN SPECIES ENSDLAG00005021959 oprk1 (ENSDLAG00005021950) atp6v1h (ENSDLAG00005021830) rgs20 (ENSDLAG00005031994) tcea1 (ENSDLAG00005021812) ENSDLAG00005021809 viml (ENSDLAG00005021400) ENSDLAG00005020495 neurod6b (ENSDLAG00005029904) ENSDLAG00005002973 ENSDLAG00005020440 ENSDLAG00005028182 ENSDLAG00005020407 adcyap1r1a (ENSDLAG00005019506) ghrhra (ENSDLAG00005019446) eef1da (ENSDLAG00005019391) ##22 ENSDLAG00005019441 them6 (ENSDLAG00005026753) ENSDLAG00005019417 zgc:113531 (ENSDLAG00005026544) ENSDLAG00005029420 b4galt2 (ENSDLAG00005032644) atp6v0b (ENSDLAG00005031838) kiss1ra (ENSDLAG00005019344) ENSDLAG00005028004 ENSDLAG00005019330 ENSDLAG00005019320 ENSDLAG00005019317 ENSDLAG00005018995 ENSDLAG00005018928 ENSDLAG00005030633 Large yellow croaker MODERN SPECIES 1 oprk1 (ENSLCRG00005008528) atp6v1h (ENSLCRG00005008531) ENSLCRG00005008536 rgs20 (ENSLCRG00005008537) tcea1 (ENSLCRG00005008538) ENSLCRG00005008545 viml (ENSLCRG00005008549) ENSLCRG00005008586 neurod6b (ENSLCRG00005008633) ENSLCRG00005008634 XCR1 (ENSLCRG00005008635) ENSLCRG00005008636 ENSLCRG00005008638 adcyap1r1a (ENSLCRG00005008659) ghrhra (ENSLCRG00005009765) eef1da (ENSLCRG00005009769) ##22 ENSLCRG00005009781 ftr67 (ENSLCRG00005009783) si:ch73-52e5.2 (ENSLCRG00005009784) them6 (ENSLCRG00005009785) ENSLCRG00005009786 ENSLCRG00005009790 zgc:113531 (ENSLCRG00005009792) b4galt2 (ENSLCRG00005009793) ENSLCRG00005009796 atp6v0b (ENSLCRG00005009798) ENSLCRG00005009802 kiss1ra (ENSLCRG00005009810) atp5l (ENSLCRG00005009868) ift22 (ENSLCRG00005009871) ENSLCRG00005009879 Tetraodontidae ANCESTRAL SPECIES 53 ENSGT00450000040296 ENSGT00550000074817.v ENSGT00940000157341.g ENSGT00390000003289 ENSGT00940000159123.a ENSGT00940000155121 ENSGT00940000154242.b.g ENSGT00940000156146.`b.b ENSGT00940000155331.A.f ENSGT00940000159827.e ENSGT01090000260052.a.a.a.a ENSGT01090000260052.a.b.i ENSGT00940000154044.a.a.q.b ENSGT00940000157362.c ENSGT00940000167394 ENSGT00950000183014.f.b.b.a.b ##22 ENSGT00390000004859.c ENSGT00390000004859.d ENSGT00390000011926 ENSGT00940000165869 ENSGT00940000159367 ENSGT00550000075120 Tetraodon MODERN SPECIES 26 ENSTNIG00000018643 CHMP5 (ENSTNIG00000018642) oprk1 (ENSTNIG00000018641) atp6v1h (ENSTNIG00000018640) ENSTNIG00000018639 tcea1 (ENSTNIG00000018638) ENSTNIG00000018637 viml (ENSTNIG00000018636) ENSTNIG00000018635 ENSTNIG00000018634 neurod6b (ENSTNIG00000018633) ENSTNIG00000018632 FYCO1 (ENSTNIG00000018631) adcyap1r1a (ENSTNIG00000018630) ghrhra (ENSTNIG00000018629) eef1da (ENSTNIG00000018628) ##22 ftr67 (ENSTNIG00000018627) si:ch73-52e5.2 (ENSTNIG00000018626) them6 (ENSTNIG00000018625) ENSTNIG00000004478 ASTN1 (ENSTNIG00000017618) PAPPA2 (ENSTNIG00000017617) cop1 (ENSTNIG00000017616) xrn1 (ENSTNIG00000017615) toe1 (ENSTNIG00000017614) selenop2 (ENSTNIG00000017613) fabp6 (ENSTNIG00000017612) zswim5 (ENSTNIG00000017611) urod (ENSTNIG00000017610) lyn (ENSTNIG00000017609) ctnnd2b (ENSTNIG00000017608) Fugu MODERN SPECIES 14 oprk1 (ENSTRUG00000011276) atp6v1h (ENSTRUG00000011467) rgs20 (ENSTRUG00000011639) tcea1 (ENSTRUG00000011743) ENSTRUG00000011850 viml (ENSTRUG00000011855) ENSTRUG00000012166 ENSTRUG00000028566 neurod6b (ENSTRUG00000024488) ENSTRUG00000020998 XCR1 (ENSTRUG00000012394) ENSTRUG00000028644 FYCO1 (ENSTRUG00000016234) adcyap1r1a (ENSTRUG00000012410) ghrhra (ENSTRUG00000012881) eef1da (ENSTRUG00000013449) ##22 ENSTRUG00000023646 ENSTRUG00000013492 si:ch73-52e5.2 (ENSTRUG00000013600) them6 (ENSTRUG00000013614) ccdc24 (ENSTRUG00000022073) zgc:113531 (ENSTRUG00000013617) b4galt2 (ENSTRUG00000013621) atp6v0b (ENSTRUG00000021739) kiss1r (ENSTRUG00000013755) atp5l (ENSTRUG00000024916) ENSTRUG00000033257 ENSTRUG00000014076 ENSTRUG00000027554 e2f5 (ENSTRUG00000002354) ENSTRUG00000003213 Pinecone sodierfish MODERN SPECIES 8 rgs20 (ENSMMDG00005012282) tcea1 (ENSMMDG00005012277) ENSMMDG00005012273 ENSMMDG00005012266 ENSMMDG00005012260 ENSMMDG00005012256 viml (ENSMMDG00005012220) PDE1C (ENSMMDG00005012216) neurod6b (ENSMMDG00005012215) ENSMMDG00005012213 ENSMMDG00005012209 XCR1 (ENSMMDG00005012205) FYCO1 (ENSMMDG00005012181) adcyap1r1a (ENSMMDG00005012111) ghrhra (ENSMMDG00005012089) eef1da (ENSMMDG00005012065) ##22 ENSMMDG00005012055 ftr67 (ENSMMDG00005012052) si:ch73-52e5.2 (ENSMMDG00005012048) them6 (ENSMMDG00005012044) ENSMMDG00005012041 ENSMMDG00005012039 zgc:113531 (ENSMMDG00005012036) b4galt2 (ENSMMDG00005012034) atp6v0b (ENSMMDG00005012032) ENSMMDG00005012029 ENSMMDG00005012027 kiss1ra (ENSMMDG00005012022) atp5l (ENSMMDG00005012015) ift22 (ENSMMDG00005012012) ENSMMDG00005012010 Cod MODERN SPECIES 21 scg2b (ENSGMOG00000000576) acsl3b (ENSGMOG00000006180) ENSGMOG00000025340 ENSGMOG00000006120 ENSGMOG00000029397 ENSGMOG00000003167 gpc1b (ENSGMOG00000003143) ENSGMOG00000031756 ENSGMOG00000032108 ENSGMOG00000036133 ENSGMOG00000035252 fgf12a (ENSGMOG00000030127) ENSGMOG00000006004 ENSGMOG00000016085 ENSGMOG00000005927 eef1da (ENSGMOG00000033143) ##22 ENSGMOG00000005987 ftr67 (ENSGMOG00000005975) si:ch73-52e5.2 (ENSGMOG00000005967) them6 (ENSGMOG00000005963) ENSGMOG00000034723 ENSGMOG00000035831 b4galt2 (ENSGMOG00000034489) atp6v0b (ENSGMOG00000000295) kiss1ra (ENSGMOG00000011215) ENSGMOG00000011221 ENSGMOG00000011229 ENSGMOG00000011246 ENSGMOG00000002533 ENSGMOG00000011255 ssx2ipa (ENSGMOG00000011267) Neopterygii ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Huchen MODERN SPECIES 9769 ENSHHUG00000008235 ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Rainbow trout MODERN SPECIES 29 ENSOMYG00000016291 ENSOMYG00000016245 ENSOMYG00000059844 ENSOMYG00000016196 ENSOMYG00000016191 rgs20 (ENSOMYG00000058145) ENSOMYG00000052368 atp6v1h (ENSOMYG00000007811) oprk1 (ENSOMYG00000007897) ENSOMYG00000049522 ENSOMYG00000053024 bag1 (ENSOMYG00000016179) ENSOMYG00000016186 ENSOMYG00000007925 ENSOMYG00000007939 ENSOMYG00000007970 ##22 ENSOMYG00000055518 ENSOMYG00000070710 ENSOMYG00000055913 ENSOMYG00000069628 ENSOMYG00000065507 ENSOMYG00000030486 ENSOMYG00000008197 ENSOMYG00000008150 ENSOMYG00000066731 ENSOMYG00000008232 ENSOMYG00000053025 ENSOMYG00000060331 rnf2 (ENSOMYG00000059763) ENSOMYG00000053433 ENSOMYG00000060736 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Tiger tail seahorse MODERN SPECIES 517 fam131ab (ENSHCOG00000015761) alp3 (ENSHCOG00000015806) ENSHCOG00000016075 psmd2 (ENSHCOG00000016181) prss16 (ENSHCOG00000016202) serpine2 (ENSHCOG00000016220) wdfy1 (ENSHCOG00000016262) dhrs12la (ENSHCOG00000016289) AP1S3 (ENSHCOG00000016296) ENSHCOG00000016302 kcne4 (ENSHCOG00000016311) ENSHCOG00000016330 acsl3a (ENSHCOG00000016430) farsb (ENSHCOG00000016462) ENSHCOG00000016479 ENSHCOG00000016512 ##22 SGPP2 (ENSHCOG00000016537) ENSHCOG00000016554 pax3b (ENSHCOG00000016573) epha4a (ENSHCOG00000016610) pxylp1 (ENSHCOG00000016625) SLC25A36 (ENSHCOG00000016644) spsb4a (ENSHCOG00000016659) CLSTN2 (ENSHCOG00000016690) rbp2a (ENSHCOG00000016710) mrps22 (ENSHCOG00000016713) foxl2b (ENSHCOG00000016718) PIK3CB (ENSHCOG00000016759) PER2 (ENSHCOG00000016767) her13 (ENSHCOG00000016789) her8.2 (ENSHCOG00000016804) Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 NAME_4 ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Mummichog MODERN SPECIES 1218 cavin2b (ENSFHEG00000015198) ebpl (ENSFHEG00000000371) ENSFHEG00000015116 ##22 ENSFHEG00000015098 ENSFHEG00000015088 ENSFHEG00000015069 ENSFHEG00000015056 ACKR3 (ENSFHEG00000015042) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Carangaria ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00950000183014.f.b.b.b ##22 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 122 ENSCSEG00000019372 ##22 Tongue sole MODERN SPECIES 14 clcn2b (ENSCSEG00000005308) ENSCSEG00000005319 fam131ab (ENSCSEG00000005320) alp3 (ENSCSEG00000005324) psmd2 (ENSCSEG00000005336) ENSCSEG00000005344 prss16 (ENSCSEG00000005385) serpine2 (ENSCSEG00000005386) wdfy1 (ENSCSEG00000005391) dhrs12la (ENSCSEG00000005401) AP1S3 (ENSCSEG00000005403) ENSCSEG00000005404 kcne4 (ENSCSEG00000005406) acsl3a (ENSCSEG00000005409) farsb (ENSCSEG00000005415) ENSCSEG00000005424 ##22 SGPP2 (ENSCSEG00000005427) ENSCSEG00000005430 pax3b (ENSCSEG00000005432) SYPL2 (ENSCSEG00000005437) yap1 (ENSCSEG00000005445) ENSCSEG00000005449 GAB2 (ENSCSEG00000005457) nars2 (ENSCSEG00000005464) tenm4 (ENSCSEG00000005488) FAM181B (ENSCSEG00000005508) ENSCSEG00000005516 prcp (ENSCSEG00000005520) ppp5c (ENSCSEG00000005534) tgfb1a (ENSCSEG00000005544) ENSCSEG00000005549 Cyclostomata ANCESTRAL SPECIES 998 ENSGT00390000004681.g #19 ENSGT00950000183014.f.b #22 Lamprey MODERN SPECIES 6084 eef1da (ENSPMAG00000007622) #22 Hagfish MODERN SPECIES 1229 HSPH1 (ENSEBUG00000007939) ENSEBUG00000004200 ENSEBUG00000013219 ENSEBUG00000000910 gfus.2 (ENSEBUG00000001205) #19 ENSEBUG00000009511 #22 ENSEBUG00000015289 ENSEBUG00000005441 ENSEBUG00000009269 bpnt2 (ENSEBUG00000008320) myl7 (ENSEBUG00000009227) ENSEBUG00000005436 ENSEBUG00000003988 ENSEBUG00000009594 sdr16c5a (ENSEBUG00000001858) ENSEBUG00000014369 ENSEBUG00000013267 ENSEBUG00000009766 SLCO5A1 (ENSEBUG00000009861) ENSEBUG00000016309 VSNL1 (ENSEBUG00000007018) Vertebrata ANCESTRAL SPECIES ENSGT00950000183014.f.a ##22 Gnathostomata ANCESTRAL SPECIES 593 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00440000037606 Elephant shark MODERN SPECIES 1561 PARD3B (ENSCMIG00000012376) nrp2a (ENSCMIG00000012407) ino80db (ENSCMIG00000012428) ndufs1 (ENSCMIG00000012456) eef1b2 (ENSCMIG00000012489) ##22 ENSCMIG00000012501 klf7b (ENSCMIG00000012503) pfklb (ENSCMIG00000012575) COL6A1 (ENSCMIG00000012721) COL6A2 (ENSCMIG00000012731) SF3B1 (ENSCMIG00000012746) coq10b (ENSCMIG00000012773) hspd1 (ENSCMIG00000012777) hspe1 (ENSCMIG00000012789) RFTN2 (ENSCMIG00000012791) BOLL (ENSCMIG00000012794) PLCL1 (ENSCMIG00000012806) satb2 (ENSCMIG00000012810) ftcdnl1 (ENSCMIG00000012821) zgc:153521 (ENSCMIG00000012823) Euteleostomi ANCESTRAL SPECIES 107 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.B ENSGT00530000063873.A ENSGT00940000156552 ENSGT00940000156089 ENSGT00940000176171 ENSGT00500000044939 ENSGT00390000005159 ENSGT00940000156444 ENSGT00940000155861.C Sarcopterygii ANCESTRAL SPECIES 293 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 Coelacanth MODERN SPECIES 669 PARD3B (ENSLACG00000003766) ENSLACG00000013079 NRP2 (ENSLACG00000013759) INO80D (ENSLACG00000015319) NDUFS1 (ENSLACG00000015589) EEF1B2 (ENSLACG00000015714) ##22 CMKLR2 (ENSLACG00000015809) Tetrapoda ANCESTRAL SPECIES 6 ENSGT00390000013916 ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000162639 ENSGT00940000159743 ENSGT00390000012547.b Anura ANCESTRAL SPECIES 39 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508.d ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00940000163494.a.b.f ENSGT00940000163494.a.b.e.a.a.b ENSGT00940000163322.a.b.c.b.a Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 7 EML4 (ENSLLEG00000015786) COX7A2L (ENSLLEG00000016604) KCNG3 (ENSLLEG00000016683) ENSLLEG00000005035 HAAO (ENSLLEG00000005053) ENSLLEG00000005084 ZFP36L2 (ENSLLEG00000005100) THADA (ENSLLEG00000005176) PLEKHH2 (ENSLLEG00000005594) DYNC2LI1 (ENSLLEG00000006063) ABCG5 (ENSLLEG00000006291) ABCG8 (ENSLLEG00000006535) LRPPRC (ENSLLEG00000006826) ENSLLEG00000007491 ENSLLEG00000007502 ENSLLEG00000007511 ##22 SLC3A1 (ENSLLEG00000007536) PREPL (ENSLLEG00000007686) ENSLLEG00000007738 CAMKMT (ENSLLEG00000007761) ENSLLEG00000007801 SIX3 (ENSLLEG00000007815) SIX2 (ENSLLEG00000007832) ENSLLEG00000007859 SRBD1 (ENSLLEG00000007877) PRKCE (ENSLLEG00000008100) ENSLLEG00000008299 ENSLLEG00000008313 EPAS1 (ENSLLEG00000008398) ENSLLEG00000009218 RHOQ (ENSLLEG00000009247) Leishan spiny toad MODERN SPECIES 10 ENSLLEG00000023607 PPIL1 (ENSLLEG00000023656) COL6A2 (ENSLLEG00000023804) ENSLLEG00000024478 ENSLLEG00000026251 SLC19A1 (ENSLLEG00000026312) ENSLLEG00000026468 ENSLLEG00000026502 ENSLLEG00000026550 ENSLLEG00000026571 ENSLLEG00000026634 INO80D (ENSLLEG00000026673) ENSLLEG00000026753 NDUFS1 (ENSLLEG00000026791) NDUFA3 (ENSLLEG00000027063) ENSLLEG00000027121 ##22 CMKLR2 (ENSLLEG00000027365) ENSLLEG00000027417 ADAM23 (ENSLLEG00000027464) ENSLLEG00000027839 ENSLLEG00000027867 MDH1B (ENSLLEG00000027901) ENSLLEG00000027975 ENSLLEG00000028046 ENSLLEG00000028099 KLF7 (ENSLLEG00000028217) ENSLLEG00000028248 ENSLLEG00000028325 ENSLLEG00000028357 ENSLLEG00000028383 ENSLLEG00000028397 Leishan spiny toad MODERN SPECIES ENSLLEG00000004080 ENSLLEG00000004084 ENSLLEG00000004087 ATCAY (ENSLLEG00000004102) ENSLLEG00000004129 ENSLLEG00000004130 MRPL54 (ENSLLEG00000004133) ENSLLEG00000004137 APBA3 (ENSLLEG00000005030) TJP3 (ENSLLEG00000005069) PIP5K1C (ENSLLEG00000005163) ENSLLEG00000005325 ENSLLEG00000005335 ENSLLEG00000005389 TBXA2R (ENSLLEG00000005403) ENSLLEG00000005419 ##22 ENSLLEG00000005448 GIPC3 (ENSLLEG00000005535) ENSLLEG00000005921 SIRT6 (ENSLLEG00000005985) ANKRD24 (ENSLLEG00000006062) ENSLLEG00000006202 EBI3 (ENSLLEG00000006222) ENSLLEG00000006260 YJU2 (ENSLLEG00000006276) SHD (ENSLLEG00000006359) FSD1 (ENSLLEG00000006411) STAP2 (ENSLLEG00000006482) MPND (ENSLLEG00000006549) SH3GL1 (ENSLLEG00000006767) CHAF1A (ENSLLEG00000007112) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000022266 CLIP2 (ENSLLEG00000022336) GTF2IRD1 (ENSLLEG00000022903) ENSLLEG00000024294 GTF2I (ENSLLEG00000024352) ENSLLEG00000000484 NCF1 (ENSLLEG00000000499) RCC1L (ENSLLEG00000000519) CASTOR2 (ENSLLEG00000000547) ENSLLEG00000000572 ENSLLEG00000000596 ENSLLEG00000000705 ENSLLEG00000000741 C11orf54 (ENSLLEG00000000752) TBX4 (ENSLLEG00000000863) ENSLLEG00000000955 ##22 ENSLLEG00000000989 ENSLLEG00000001065 ENSLLEG00000001072 ENSLLEG00000001079 ENSLLEG00000001084 ENSLLEG00000001091 ENSLLEG00000001098 BCAS3 (ENSLLEG00000001138) ENSLLEG00000001387 PPM1D (ENSLLEG00000001395) ENSLLEG00000001422 APPBP2 (ENSLLEG00000001470) ENSLLEG00000001606 ENSLLEG00000001717 ENSLLEG00000002005 Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000021126 FLAD1 (ENSLLEG00000020865) ENSLLEG00000020831 ENSLLEG00000020765 ENSLLEG00000020652 ENSLLEG00000020417 ADAM15 (ENSLLEG00000018541) ENSLLEG00000018448 ENSLLEG00000018428 ENSLLEG00000018406 EFNA3 (ENSLLEG00000018276) EFNA1 (ENSLLEG00000018230) SLC50A1 (ENSLLEG00000018165) DPM3 (ENSLLEG00000018141) ENSLLEG00000018121 ENSLLEG00000018073 ##22 KRTCAP2 (ENSLLEG00000017943) TRIM46 (ENSLLEG00000017769) ENSLLEG00000017723 MTX1 (ENSLLEG00000017477) THBS3 (ENSLLEG00000017250) ENSLLEG00000017225 ENSLLEG00000017139 GBA1 (ENSLLEG00000016951) ENTREP3 (ENSLLEG00000016807) ENSLLEG00000016741 ENSLLEG00000016665 ENSLLEG00000016636 CLK2 (ENSLLEG00000016536) ENSLLEG00000016054 PKLR (ENSLLEG00000015194) Frog MODERN SPECIES 9 ccnyl1 (ENSXETG00000016385) fzd5 (ENSXETG00000046962) mettl21a (ENSXETG00000046854) creb1 (ENSXETG00000016392) klf7 (ENSXETG00000046427) ENSXETG00000048816 fastkd2 (ENSXETG00000031283) mdh1b (ENSXETG00000034073) ENSXETG00000044734 adam23 (ENSXETG00000010118) ENSXETG00000046685 ENSXETG00000042410 cmklr2 (ENSXETG00000043302) cops8 (ENSXETG00000025427) ndufs1 (ENSXETG00000010108) eef1b2 (ENSXETG00000010098) ##22 ino80d (ENSXETG00000033629) ENSXETG00000048152 nrp2 (ENSXETG00000010095) pard3b (ENSXETG00000012407) ICOS (ENSXETG00000040525) als2 (ENSXETG00000012406) cdk15 (ENSXETG00000012405) ENSXETG00000037714 ENSXETG00000040147 fzd7 (ENSXETG00000012404) kiaa2012 (ENSXETG00000041127) sumo1 (ENSXETG00000022072) nop58 (ENSXETG00000022073) bmpr2 (ENSXETG00000022074) fam117b (ENSXETG00000022076) Amniota ANCESTRAL SPECIES 6 ENSGT00390000013916 ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000162639 ENSGT00940000159743 Mammalia ANCESTRAL SPECIES 6 ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232 Platypus MODERN SPECIES 18 ENSOANG00000009001 CYP20A1 (ENSOANG00000015019) ABI2 (ENSOANG00000001380) ENSOANG00000006769 ENSOANG00000048576 CD28 (ENSOANG00000040633) CTLA4 (ENSOANG00000010895) ENSOANG00000007435 ENSOANG00000041151 PARD3B (ENSOANG00000014041) ENSOANG00000044745 NRP2 (ENSOANG00000012962) ENSOANG00000038688 INO80D (ENSOANG00000012965) NDUFS1 (ENSOANG00000002321) EEF1B2 (ENSOANG00000012964) ##22 CMKLR2 (ENSOANG00000012797) ADAM23 (ENSOANG00000000660) FAM237A (ENSOANG00000045785) MDH1B (ENSOANG00000000659) ENSOANG00000020472 KLF7 (ENSOANG00000047076) TIMM17A (ENSOANG00000043200) LMOD1 (ENSOANG00000041996) SHISA4 (ENSOANG00000009360) IPO9 (ENSOANG00000009358) ENSOANG00000009356 ENSOANG00000048097 NAV1 (ENSOANG00000009353) ENSOANG00000009350 PHLDA3 (ENSOANG00000009349) Theria ANCESTRAL SPECIES 5 ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272 Marsupialia ANCESTRAL SPECIES 8 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000155877 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.b ENSGT00940000163272 Opossum MODERN SPECIES 6 NBEAL1 (ENSMODG00000016268) ENSMODG00000037522 CYP20A1 (ENSMODG00000016255) ABI2 (ENSMODG00000016244) ENSMODG00000016237 CD28 (ENSMODG00000016234) CTLA4 (ENSMODG00000016230) ENSMODG00000025487 ENSMODG00000024816 ENSMODG00000024817 PARD3B (ENSMODG00000016213) NRP2 (ENSMODG00000016052) ENSMODG00000016028 INO80D (ENSMODG00000016027) NDUFS1 (ENSMODG00000016019) EEF1B2 (ENSMODG00000016012) ##22 GPR1 (ENSMODG00000046264) ADAM23 (ENSMODG00000016005) FAM237A (ENSMODG00000027693) ENSMODG00000016001 FASTKD2 (ENSMODG00000015997) CPO (ENSMODG00000015987) KLF7 (ENSMODG00000015982) CREB1 (ENSMODG00000015970) METTL21A (ENSMODG00000015959) ENSMODG00000015954 FZD5 (ENSMODG00000015949) PLEKHM3 (ENSMODG00000027343) ENSMODG00000024830 CRYGD (ENSMODG00000051256) ENSMODG00000044652 Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270.c ENSGT00940000155877 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.b ENSGT00940000163272 Tasmanian devil MODERN SPECIES 2 NBEAL1 (ENSSHAG00000000284) ENSSHAG00000021267 CYP20A1 (ENSSHAG00000028734) ABI2 (ENSSHAG00000008450) ENSSHAG00000007679 CD28 (ENSSHAG00000028743) CTLA4 (ENSSHAG00000016177) ENSSHAG00000015832 ENSSHAG00000024535 PARD3B (ENSSHAG00000001616) ENSSHAG00000024159 ENSSHAG00000018322 ENSSHAG00000026001 INO80D (ENSSHAG00000029318) NDUFS1 (ENSSHAG00000017865) EEF1B2 (ENSSHAG00000017853) ##22 CMKLR2 (ENSSHAG00000021936) ENSSHAG00000028209 ADAM23 (ENSSHAG00000017245) FAM237A (ENSSHAG00000017064) MDH1B (ENSSHAG00000016820) ENSSHAG00000016740 ENSSHAG00000022521 CPO (ENSSHAG00000026232) KLF7 (ENSSHAG00000015861) CREB1 (ENSSHAG00000013905) METTL21A (ENSSHAG00000013828) ENSSHAG00000013219 FZD5 (ENSSHAG00000027632) PLEKHM3 (ENSSHAG00000011794) ENSSHAG00000011379 Diprotodontia ANCESTRAL SPECIES 31 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270.c ENSGT00940000155877 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.b ENSGT00940000158720.a Wallaby MODERN SPECIES 2515 EEF1B2 (ENSMEUG00000002654) ##22 CMKLR2 (ENSMEUG00000002658) Diprotodontia_a ANCESTRAL SPECIES 30 ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT01030000234979.a ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270.c ENSGT00940000155877 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.b ENSGT00940000158720.a koala DUPLICATION koala DUPLICATION koala MODERN SPECIES ENSPCIG00000008101 SLC12A6 (ENSPCIG00000008102) ENSPCIG00000008111 EMC4 (ENSPCIG00000008110) KATNBL1 (ENSPCIG00000008113) EMC7 (ENSPCIG00000008117) CHRM5 (ENSPCIG00000008119) ENSPCIG00000008122 RYR3 (ENSPCIG00000008500) ENSPCIG00000025274 ENSPCIG00000025270 FMN1 (ENSPCIG00000031687) GREM1 (ENSPCIG00000032594) SCG5 (ENSPCIG00000037225) ENSPCIG00000021774 ENSPCIG00000021769 ##22 GJD2 (ENSPCIG00000021768) ACTC1 (ENSPCIG00000021766) AQR (ENSPCIG00000021761) ZNF770 (ENSPCIG00000021758) ENSPCIG00000036249 ENSPCIG00000002815 CDIN1 (ENSPCIG00000023021) MEIS2 (ENSPCIG00000023017) ENSPCIG00000014822 SPRED1 (ENSPCIG00000004169) FAM98B (ENSPCIG00000017154) RASGRP1 (ENSPCIG00000017152) koala MODERN SPECIES 91 CECR2 (ENSPCIG00000012011) ADA2 (ENSPCIG00000012017) HDHD5 (ENSPCIG00000012020) TMEM121B (ENSPCIG00000012021) IL17RA (ENSPCIG00000012023) CACNA1C (ENSPCIG00000008123) DCP1B (ENSPCIG00000019743) CACNA2D4 (ENSPCIG00000019753) LRTM2 (ENSPCIG00000019789) ADIPOR2 (ENSPCIG00000019792) ENSPCIG00000019794 WNT5B (ENSPCIG00000019795) FBXL14 (ENSPCIG00000019796) ENSPCIG00000031209 ERC1 (ENSPCIG00000019858) ENSPCIG00000021792 ##22 ENSPCIG00000027450 WNK1 (ENSPCIG00000027449) NINJ2 (ENSPCIG00000027815) B4GALNT3 (ENSPCIG00000027809) CCDC77 (ENSPCIG00000027799) ENSPCIG00000033109 KDM5A (ENSPCIG00000027786) SLC6A13 (ENSPCIG00000027782) SLC6A12 (ENSPCIG00000023333) IQSEC3 (ENSPCIG00000023267) ENSPCIG00000003420 DDX11 (ENSPCIG00000003449) FKBP4 (ENSPCIG00000023262) ITFG2 (ENSPCIG00000023259) ENSPCIG00000023256 koala MODERN SPECIES 231 NBEAL1 (ENSPCIG00000022908) ENSPCIG00000022906 CYP20A1 (ENSPCIG00000022811) ABI2 (ENSPCIG00000015338) ENSPCIG00000015308 ENSPCIG00000015292 CD28 (ENSPCIG00000015286) CTLA4 (ENSPCIG00000015278) ENSPCIG00000015275 PARD3B (ENSPCIG00000006317) ENSPCIG00000006319 NRP2 (ENSPCIG00000006323) ENSPCIG00000006327 INO80D (ENSPCIG00000006328) NDUFS1 (ENSPCIG00000009914) ENSPCIG00000009878 ##22 CMKLR2 (ENSPCIG00000015684) Common wonbat DUPLICATION Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1038 ENSVURG00010005614 CYP20A1 (ENSVURG00010005594) ABI2 (ENSVURG00010005572) RAPH1 (ENSVURG00010005515) ENSVURG00010005495 ENSVURG00010005489 CD28 (ENSVURG00010005486) CTLA4 (ENSVURG00010005475) ENSVURG00010005458 ENSVURG00010005443 PARD3B (ENSVURG00010005402) NRP2 (ENSVURG00010005142) ENSVURG00010005096 INO80D (ENSVURG00010005077) NDUFS1 (ENSVURG00010005021) ENSVURG00010004989 ##22 CMKLR2 (ENSVURG00010004980) ENSVURG00010004970 ENSVURG00010004965 FAM237A (ENSVURG00010004897) MDH1B (ENSVURG00010004893) FASTKD2 (ENSVURG00010004867) CPO (ENSVURG00010004833) ENSVURG00010004815 KLF7 (ENSVURG00010004801) CREB1 (ENSVURG00010004759) METTL21A (ENSVURG00010004735) ENSVURG00010004692 FZD5 (ENSVURG00010004678) PLEKHM3 (ENSVURG00010004626) ENSVURG00010004601 Common wonbat MODERN SPECIES 1061 TCTE1 (ENSVURG00010004721) AARS2 (ENSVURG00010004679) ENSVURG00010004664 CDC5L (ENSVURG00010004630) ENSVURG00010004604 SUPT3H (ENSVURG00010004557) RUNX2 (ENSVURG00010004510) CLIC5 (ENSVURG00010004484) ENPP4 (ENSVURG00010004470) ENPP5 (ENSVURG00010004464) RCAN2 (ENSVURG00010004453) CYP39A1 (ENSVURG00010004407) TDRD6 (ENSVURG00010004308) PLA2G7 (ENSVURG00010004284) ANKRD66 (ENSVURG00010004273) ENSVURG00010004261 ##22 ENSVURG00010004242 ADGRF5 (ENSVURG00010004202) ADGRF1 (ENSVURG00010004166) TNFRSF21 (ENSVURG00010004150) CD2AP (ENSVURG00010004022) ENSVURG00010003986 ADGRF4 (ENSVURG00010003970) OPN5 (ENSVURG00010003945) ENSVURG00010003932 ENSVURG00010003918 ENSVURG00010003910 MMUT (ENSVURG00010003869) ENSVURG00010003846 GLYATL3 (ENSVURG00010003832) RHAG (ENSVURG00010003442) Common wonbat MODERN SPECIES 1014 ENSVURG00010019014 PHACTR4 (ENSVURG00010019021) RCC1 (ENSVURG00010019034) TRNAU1AP (ENSVURG00010019042) RAB42 (ENSVURG00010019057) ENSVURG00010019060 TAF12 (ENSVURG00010019065) GMEB1 (ENSVURG00010019073) YTHDF2 (ENSVURG00010019090) OPRD1 (ENSVURG00010019102) EPB41 (ENSVURG00010019138) TMEM200B (ENSVURG00010019172) SRSF4 (ENSVURG00010019175) MECR (ENSVURG00010019183) PTPRU (ENSVURG00010019212) ENSVURG00010019248 ##22 MATN1 (ENSVURG00010019256) LAPTM5 (ENSVURG00010019267) ENSVURG00010019274 SDC3 (ENSVURG00010019281) PUM1 (ENSVURG00010019299) NKAIN1 (ENSVURG00010019360) SNRNP40 (ENSVURG00010019367) ZCCHC17 (ENSVURG00010019375) ENSVURG00010019386 SERINC2 (ENSVURG00010019394) TRIM62 (ENSVURG00010019411) ZNF362 (ENSVURG00010019416) PHC2 (ENSVURG00010019423) ENSVURG00010019442 ENSVURG00010019447 Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Primates ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Simiiformes ANCESTRAL SPECIES 15 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00910000146869 ENSGT00940000161191.B Catarrhini ANCESTRAL SPECIES 16 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000147537 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 ENSGT00910000147537 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Macaca ANCESTRAL SPECIES 15 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552.b ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Macaca_a ANCESTRAL SPECIES 17 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552.b ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000147537 ENSGT00940000159743 Rhesus MODERN SPECIES 3 CARF (ENSMMUG00000006418) NBEAL1 (ENSMMUG00000006420) CYP20A1 (ENSMMUG00000005971) ABI2 (ENSMMUG00000000312) RAPH1 (ENSMMUG00000000314) CD28 (ENSMMUG00000057214) CTLA4 (ENSMMUG00000015903) ICOS (ENSMMUG00000002648) ENSMMUG00000052080 PARD3B (ENSMMUG00000014814) ENSMMUG00000055410 NRP2 (ENSMMUG00000020052) INO80D (ENSMMUG00000001053) ENSMMUG00000054550 NDUFS1 (ENSMMUG00000016788) EEF1B2 (ENSMMUG00000001054) ##22 CMKLR2 (ENSMMUG00000008334) ZDBF2 (ENSMMUG00000031276) ADAM23 (ENSMMUG00000011641) FAM237A (ENSMMUG00000052987) DYTN (ENSMMUG00000048288) MDH1B (ENSMMUG00000017734) FASTKD2 (ENSMMUG00000017735) CPO (ENSMMUG00000063052) ENSMMUG00000051957 KLF7 (ENSMMUG00000000190) CREB1 (ENSMMUG00000022601) METTL21A (ENSMMUG00000022602) CCNYL1 (ENSMMUG00000020211) FZD5 (ENSMMUG00000057651) PLEKHM3 (ENSMMUG00000008113) Crab-eating macaque MODERN SPECIES 3 NBEAL1 (ENSMFAG00000032529) ENSMFAG00000065796 CYP20A1 (ENSMFAG00000036924) ENSMFAG00000048556 ABI2 (ENSMFAG00000031286) ENSMFAG00000003148 ENSMFAG00000062324 CD28 (ENSMFAG00000003864) CTLA4 (ENSMFAG00000004047) ICOS (ENSMFAG00000053159) PARD3B (ENSMFAG00000043904) NRP2 (ENSMFAG00000038385) ENSMFAG00000053377 ##14 INO80D (ENSMFAG00000001629) NDUFS1 (ENSMFAG00000039201) ENSMFAG00000038364 ##22 CMKLR2 (ENSMFAG00000013528) ZDBF2 (ENSMFAG00000044616) ADAM23 (ENSMFAG00000030094) FAM237A (ENSMFAG00000031105) DYTN (ENSMFAG00000044098) MDH1B (ENSMFAG00000035811) ENSMFAG00000049460 FASTKD2 (ENSMFAG00000033471) CPO (ENSMFAG00000062349) KLF7 (ENSMFAG00000039083) ENSMFAG00000041805 CREB1 (ENSMFAG00000039629) CCNYL1 (ENSMFAG00000001361) ENSMFAG00000009381 PLEKHM3 (ENSMFAG00000033450) Pig-tailed macaque MODERN SPECIES 409 CARF (ENSMNEG00000033105) NBEAL1 (ENSMNEG00000044041) CYP20A1 (ENSMNEG00000045164) ABI2 (ENSMNEG00000028519) RAPH1 (ENSMNEG00000030823) ENSMNEG00000036304 CD28 (ENSMNEG00000033642) ENSMNEG00000030427 CTLA4 (ENSMNEG00000043834) ICOS (ENSMNEG00000029598) PARD3B (ENSMNEG00000040103) ENSMNEG00000031020 NRP2 (ENSMNEG00000039082) INO80D (ENSMNEG00000032459) NDUFS1 (ENSMNEG00000032822) ENSMNEG00000030060 ##22 ZDBF2 (ENSMNEG00000031863) ENSMNEG00000028225 ADAM23 (ENSMNEG00000027959) FAM237A (ENSMNEG00000032870) DYTN (ENSMNEG00000038040) MDH1B (ENSMNEG00000043559) FASTKD2 (ENSMNEG00000043091) CPO (ENSMNEG00000008835) KLF7 (ENSMNEG00000027996) CREB1 (ENSMNEG00000030274) METTL21A (ENSMNEG00000034465) CCNYL1 (ENSMNEG00000035559) FZD5 (ENSMNEG00000024425) ENSMNEG00000045370 ENSMNEG00000028169 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Olive baboon MODERN SPECIES 1 ICA1L (ENSPANG00000017467) ENSPANG00000008983 ENSPANG00000008982 NBEAL1 (ENSPANG00000000692) CYP20A1 (ENSPANG00000002439) ABI2 (ENSPANG00000023238) RAPH1 (ENSPANG00000018186) CD28 (ENSPANG00000011488) CTLA4 (ENSPANG00000007100) ICOS (ENSPANG00000010251) ENSPANG00000042490 PARD3B (ENSPANG00000017315) NRP2 (ENSPANG00000011487) INO80D (ENSPANG00000005753) NDUFS1 (ENSPANG00000019101) ENSPANG00000011248 ##22 CMKLR2 (ENSPANG00000007301) ZDBF2 (ENSPANG00000023236) ENSPANG00000032033 ADAM23 (ENSPANG00000025872) FAM237A (ENSPANG00000032174) DYTN (ENSPANG00000011028) MDH1B (ENSPANG00000022792) ENSPANG00000043039 FASTKD2 (ENSPANG00000012835) CPO (ENSPANG00000005004) KLF7 (ENSPANG00000005240) CREB1 (ENSPANG00000009083) METTL21A (ENSPANG00000024440) ENSPANG00000047863 ENSPANG00000050559 ##14 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Sooty mangabey MODERN SPECIES 570 ICA1L (ENSCATG00000036911) ENSCATG00000035496 CARF (ENSCATG00000035061) NBEAL1 (ENSCATG00000036478) CYP20A1 (ENSCATG00000034415) ABI2 (ENSCATG00000038300) RAPH1 (ENSCATG00000044686) ENSCATG00000043923 CD28 (ENSCATG00000043017) CTLA4 (ENSCATG00000036235) ICOS (ENSCATG00000043591) PARD3B (ENSCATG00000022284) NRP2 (ENSCATG00000032051) INO80D (ENSCATG00000044654) NDUFS1 (ENSCATG00000037259) ENSCATG00000037736 ##22 ZDBF2 (ENSCATG00000037091) ENSCATG00000037624 ADAM23 (ENSCATG00000043626) FAM237A (ENSCATG00000036777) DYTN (ENSCATG00000035275) MDH1B (ENSCATG00000035467) FASTKD2 (ENSCATG00000038647) CPO (ENSCATG00000043384) KLF7 (ENSCATG00000041615) CREB1 (ENSCATG00000037133) METTL21A (ENSCATG00000041598) CCNYL1 (ENSCATG00000037115) FZD5 (ENSCATG00000004406) ENSCATG00000036323 PLEKHM3 (ENSCATG00000036070) Drill MODERN SPECIES 1118 ENSMLEG00000011609 ENSMLEG00000036475 ##22 CMKLR2 (ENSMLEG00000027347) ZDBF2 (ENSMLEG00000026949) ENSMLEG00000039767 ADAM23 (ENSMLEG00000028493) FAM237A (ENSMLEG00000037673) DYTN (ENSMLEG00000040225) MDH1B (ENSMLEG00000030914) FASTKD2 (ENSMLEG00000030777) CPO (ENSMLEG00000034929) KLF7 (ENSMLEG00000003421) CREB1 (ENSMLEG00000033904) METTL21A (ENSMLEG00000028195) CCNYL1 (ENSMLEG00000041254) ENSMLEG00000039230 ENSMLEG00000039137 Vervet Monkey MODERN SPECIES 11 GSS (ENSCSAG00000011868) MYH7B (ENSCSAG00000011856) TRPC4AP (ENSCSAG00000011828) EDEM2 (ENSCSAG00000011816) PROCR (ENSCSAG00000011810) BTBD3 (ENSCSAG00000011805) ENSCSAG00000018669 SPTLC3 (ENSCSAG00000011801) ISM1 (ENSCSAG00000011795) TASP1 (ENSCSAG00000011790) ESF1 (ENSCSAG00000011777) NDUFAF5 (ENSCSAG00000011769) SEL1L2 (ENSCSAG00000011747) ENSCSAG00000018670 FLRT3 (ENSCSAG00000018671) ENSCSAG00000018672 ##22 KIF16B (ENSCSAG00000011693) SNRPB2 (ENSCSAG00000011677) OTOR (ENSCSAG00000011668) PCSK2 (ENSCSAG00000011663) BFSP1 (ENSCSAG00000011654) DSTN (ENSCSAG00000011648) RRBP1 (ENSCSAG00000011641) BANF2 (ENSCSAG00000011624) SNX5 (ENSCSAG00000011605) MGME1 (ENSCSAG00000011551) OVOL2 (ENSCSAG00000011547) KAT14 (ENSCSAG00000011539) ENSCSAG00000018673 ZNF133 (ENSCSAG00000011532) DZANK1 (ENSCSAG00000011523) Rhinopithecus ANCESTRAL SPECIES 73 ENSGT00390000005530.a.a ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.a.a ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b.c ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 1164 PARD3B (ENSRBIG00000039853) NRP2 (ENSRBIG00000035417) INO80D (ENSRBIG00000044868) NDUFS1 (ENSRBIG00000020611) ENSRBIG00000040112 ##22 ENSRBIG00000031452 ZDBF2 (ENSRBIG00000033928) ADAM23 (ENSRBIG00000032092) FAM237A (ENSRBIG00000033114) DYTN (ENSRBIG00000028505) ENSRBIG00000025761 FASTKD2 (ENSRBIG00000039778) CPO (ENSRBIG00000037719) KLF7 (ENSRBIG00000040855) Black snub-nosed monkey MODERN SPECIES 1182 FOLR1 (ENSRBIG00000040144) ENSRBIG00000039297 ENSRBIG00000040696 TOMT (ENSRBIG00000037486) ENSRBIG00000033808 LAMTOR1 (ENSRBIG00000028888) NUMA1 (ENSRBIG00000034317) IL18BP (ENSRBIG00000037256) RNF121 (ENSRBIG00000038083) ENSRBIG00000000062 ENSRBIG00000044109 ART5 (ENSRBIG00000031267) ART1 (ENSRBIG00000032899) CHRNA10 (ENSRBIG00000009540) NUP98 (ENSRBIG00000042244) ENSRBIG00000029882 ##22 PGAP2 (ENSRBIG00000037238) ENSRBIG00000022864 ENSRBIG00000001392 STIM1 (ENSRBIG00000033985) RRM1 (ENSRBIG00000038064) OR52B4 (ENSRBIG00000028917) TRIM21 (ENSRBIG00000025459) ENSRBIG00000036869 OR52K1 (ENSRBIG00000041449) ENSRBIG00000039679 Golden snub-nosed monkey MODERN SPECIES 2758 CARF (ENSRROG00000045180) NBEAL1 (ENSRROG00000015491) CYP20A1 (ENSRROG00000040044) ABI2 (ENSRROG00000040959) RAPH1 (ENSRROG00000010278) ENSRROG00000006311 ENSRROG00000034411 CD28 (ENSRROG00000043826) ENSRROG00000034095 CTLA4 (ENSRROG00000028565) ICOS (ENSRROG00000038288) PARD3B (ENSRROG00000013717) NRP2 (ENSRROG00000040911) INO80D (ENSRROG00000003571) NDUFS1 (ENSRROG00000033953) ENSRROG00000041925 ##22 CMKLR2 (ENSRROG00000015659) ENSRROG00000038360 ZDBF2 (ENSRROG00000032109) ADAM23 (ENSRROG00000036437) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000155233.g.a ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163666.a ENSGT00940000163368 ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00730000111329.k.a ENSGT00940000153768.a ENSGT01030000235038.b ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000155233.g.a ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163666.a.a.a ENSGT00940000163368 ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00730000111329.k.a ENSGT00940000153768.a ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000163567.a ENSGT00940000155233.g.a.a.a ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163368 ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00940000153768.a ENSGT00730000111329.k.a ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000155233.g.a.a.a ENSGT00940000155233.g.a.b ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163368 ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00730000111329.k.a ENSGT00940000153768.a ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Cercopithecinae_d ANCESTRAL SPECIES 38 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000155233.g.a.a.a ENSGT00940000155233.g.a.b ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163666.a.b ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00940000153768.a ENSGT00730000111329.k.a ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Drill MODERN SPECIES 1606 CXCL2 (ENSMLEG00000023822) ENSMLEG00000029936 ENSMLEG00000043838 CXCL5 (ENSMLEG00000041463) PPBP (ENSMLEG00000034227) PF4 (ENSMLEG00000035999) ENSMLEG00000009971 CXCL1 (ENSMLEG00000037051) PF4V1 (ENSMLEG00000009462) CXCL6 (ENSMLEG00000044416) CXCL8 (ENSMLEG00000031835) ENSMLEG00000036352 ##22 RASSF6 (ENSMLEG00000035594) AFM (ENSMLEG00000036734) AFP (ENSMLEG00000037938) ALB (ENSMLEG00000042002) ANKRD17 (ENSMLEG00000028444) ENSMLEG00000010226 COX18 (ENSMLEG00000028307) Sooty mangabey MODERN SPECIES 243 ENSCATG00000035875 ENSCATG00000035713 PPBP (ENSCATG00000035637) PF4 (ENSCATG00000035582) ENSCATG00000032841 CXCL1 (ENSCATG00000032400) PF4V1 (ENSCATG00000045228) CXCL6 (ENSCATG00000045162) CXCL8 (ENSCATG00000044770) ENSCATG00000035499 ##22 RASSF6 (ENSCATG00000042058) AFM (ENSCATG00000001444) AFP (ENSCATG00000038415) ALB (ENSCATG00000037896) ENSCATG00000032531 ANKRD17 (ENSCATG00000031056) COX18 (ENSCATG00000044599) ADAMTS3 (ENSCATG00000042620) NPFFR2 (ENSCATG00000036234) GC (ENSCATG00000037739) SLC4A4 (ENSCATG00000003736) DCK (ENSCATG00000022131) MOB1B (ENSCATG00000031377) GRSF1 (ENSCATG00000035808) RUFY3 (ENSCATG00000020836) Macaca ANCESTRAL SPECIES 26 ENSGT00390000014545 ENSGT00940000160508 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163666.a.a.a ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00940000153768.a ENSGT00730000111329.k.a ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000160508 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000155233.g.a.a.a ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163666.a.a.a ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00940000153768.a ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT00940000158529 ENSGT00940000156035 ENSGT00390000012791 ENSGT00500000044947 Crab-eating macaque MODERN SPECIES 15 PARM1 (ENSMFAG00000042667) BTC (ENSMFAG00000041065) AREG (ENSMFAG00000039089) EREG (ENSMFAG00000052508) EPGN (ENSMFAG00000033022) MTHFD2L (ENSMFAG00000036503) ENSMFAG00000044905 CXCL5 (ENSMFAG00000002889) PPBP (ENSMFAG00000031461) PF4 (ENSMFAG00000055984) ENSMFAG00000065742 CXCL1 (ENSMFAG00000035439) PF4V1 (ENSMFAG00000003796) CXCL6 (ENSMFAG00000044943) CXCL8 (ENSMFAG00000001622) ENSMFAG00000063764 ##22 RASSF6 (ENSMFAG00000036430) ENSMFAG00000041935 AFP (ENSMFAG00000001250) ALB (ENSMFAG00000000097) ANKRD17 (ENSMFAG00000033592) ENSMFAG00000062812 COX18 (ENSMFAG00000035677) ADAMTS3 (ENSMFAG00000043434) NPFFR2 (ENSMFAG00000042560) GC (ENSMFAG00000032395) SLC4A4 (ENSMFAG00000000956) DCK (ENSMFAG00000041551) GRSF1 (ENSMFAG00000037346) RUFY3 (ENSMFAG00000039421) JCHAIN (ENSMFAG00000065046) Vervet Monkey MODERN SPECIES 26 EPGN (ENSCSAG00000004735) MTHFD2L (ENSCSAG00000004738) ENSCSAG00000004747 CXCL2 (ENSCSAG00000004749) CXCL3 (ENSCSAG00000004754) ENSCSAG00000004757 ENSCSAG00000004760 PPBP (ENSCSAG00000004763) ENSCSAG00000004764 ENSCSAG00000004766 ENSCSAG00000004770 CXCL1 (ENSCSAG00000004773) ENSCSAG00000004776 CXCL6 (ENSCSAG00000004778) CXCL8 (ENSCSAG00000004781) ENSCSAG00000000419 ##22 RASSF6 (ENSCSAG00000004786) AFM (ENSCSAG00000004792) AFP (ENSCSAG00000004803) ALB (ENSCSAG00000004812) ANKRD17 (ENSCSAG00000004817) COX18 (ENSCSAG00000004821) ADAMTS3 (ENSCSAG00000004827) NPFFR2 (ENSCSAG00000004830) GC (ENSCSAG00000004834) ENSCSAG00000004841 SLC4A4 (ENSCSAG00000004845) DCK (ENSCSAG00000004847) MOB1B (ENSCSAG00000004851) GRSF1 (ENSCSAG00000004856) RUFY3 (ENSCSAG00000004858) Rhinopithecus ANCESTRAL SPECIES 44 ENSGT00940000160696 ENSGT00510000048748 ENSGT00510000048556 ENSGT00940000160901 ENSGT00940000163986.a ENSGT00940000163567.a ENSGT00940000155233.g.a ENSGT00940000163567.b ENSGT00940000162559 ENSGT00940000163666.a ENSGT00940000155233.h ENSGT00940000164504.a ENSGT00940000163666.b ENSGT00940000162749 ENSGT00940000160757 ENSGT00950000183014.f.a.g.a.b ##22 ENSGT00940000159886 ENSGT00390000000113.A.d.c.a ENSGT00390000000113.A.d.d ENSGT00390000000113.A.c ENSGT00940000153768.a ENSGT01030000235038.b ENSGT00530000063506.A ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Golden snub-nosed monkey MODERN SPECIES 3335 MTHFD2L (ENSRROG00000031977) CXCL2 (ENSRROG00000044892) ENSRROG00000033583 ENSRROG00000032419 ENSRROG00000007979 PPBP (ENSRROG00000037721) PF4 (ENSRROG00000032135) ENSRROG00000030915 CXCL1 (ENSRROG00000036512) PF4V1 (ENSRROG00000039589) CXCL6 (ENSRROG00000034994) CXCL8 (ENSRROG00000045276) ENSRROG00000040087 ##22 RASSF6 (ENSRROG00000028301) AFM (ENSRROG00000045677) AFP (ENSRROG00000037142) ALB (ENSRROG00000033445) ENSRROG00000044809 ANKRD17 (ENSRROG00000029365) COX18 (ENSRROG00000034869) Hominoidea ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Orangutan MODERN SPECIES 18 SMN1 (ENSPPYG00000015533) NAIP (ENSPPYG00000015532) ENSPPYG00000015531 OCLN (ENSPPYG00000015530) MARVELD2 (ENSPPYG00000015529) ENSPPYG00000041012 RAD17 (ENSPPYG00000015528) TAF9 (ENSPPYG00000033333) AK6 (ENSPPYG00000015527) CCDC125 (ENSPPYG00000015526) CDK7 (ENSPPYG00000015525) MRPS36 (ENSPPYG00000015524) CCNB1 (ENSPPYG00000015522) SLC30A5 (ENSPPYG00000015521) PIK3R1 (ENSPPYG00000015520) ENSPPYG00000037786 ##22 CD180 (ENSPPYG00000015519) MAST4 (ENSPPYG00000015518) ENSPPYG00000034895 SREK1 (ENSPPYG00000015515) ERBIN (ENSPPYG00000015514) NLN (ENSPPYG00000015513) SGTB (ENSPPYG00000015512) TRAPPC13 (ENSPPYG00000015511) TRIM23 (ENSPPYG00000015510) PPWD1 (ENSPPYG00000015509) CENPK (ENSPPYG00000015508) ADAMTS6 (ENSPPYG00000015507) CWC27 (ENSPPYG00000015505) ENSPPYG00000032959 ENSPPYG00000040427 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.a ##22 Mas night monkey MODERN SPECIES 974 SCARA5 (ENSANAG00000022183) PBK (ENSANAG00000031844) ESCO2 (ENSANAG00000021740) ENSANAG00000027853 SCARA3 (ENSANAG00000032323) CLU (ENSANAG00000032018) EPHX2 (ENSANAG00000006028) CHRNA2 (ENSANAG00000023714) PTK2B (ENSANAG00000034147) TRIM35 (ENSANAG00000034109) STMN4 (ENSANAG00000021238) ENSANAG00000032951 ADRA1A (ENSANAG00000022712) ENSANAG00000034640 DPYSL2 (ENSANAG00000034307) ENSANAG00000031085 ##22 BNIP3L (ENSANAG00000025801) PPP2R2A (ENSANAG00000033237) EBF2 (ENSANAG00000022835) CDCA2 (ENSANAG00000037820) ENSANAG00000025804 GNRH1 (ENSANAG00000034874) DOCK5 (ENSANAG00000032901) NEFL (ENSANAG00000022798) NEFM (ENSANAG00000029941) ADAM7 (ENSANAG00000024071) ADAMDEC1 (ENSANAG00000023742) ADAM28 (ENSANAG00000026076) STC1 (ENSANAG00000026165) NKX2-6 (ENSANAG00000027024) NKX3-1 (ENSANAG00000037342) Eutheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b ##22 Afrotheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b ##22 Tenrec MODERN SPECIES 8766 ENSETEG00000007125 ##22 Boreoeutheria DUPLICATION Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Primates ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Gibbon DUPLICATION Gibbon MODERN SPECIES 14 ENSNLEG00000029450 CYP20A1 (ENSNLEG00000035097) ENSNLEG00000007043 RAPH1 (ENSNLEG00000007048) ENSNLEG00000030127 ENSNLEG00000035533 ENSNLEG00000029125 CD28 (ENSNLEG00000007057) CTLA4 (ENSNLEG00000007059) ICOS (ENSNLEG00000007065) ENSNLEG00000007066 ENSNLEG00000036209 NRP2 (ENSNLEG00000007071) INO80D (ENSNLEG00000032256) NDUFS1 (ENSNLEG00000007090) ENSNLEG00000007098 ##22 ENSNLEG00000033131 ZDBF2 (ENSNLEG00000007100) ADAM23 (ENSNLEG00000007102) FAM237A (ENSNLEG00000007112) DYTN (ENSNLEG00000007113) MDH1B (ENSNLEG00000007114) FASTKD2 (ENSNLEG00000007116) CPO (ENSNLEG00000007121) KLF7 (ENSNLEG00000035258) CREB1 (ENSNLEG00000007124) METTL21A (ENSNLEG00000007129) CCNYL1 (ENSNLEG00000007131) FZD5 (ENSNLEG00000029167) ENSNLEG00000035287 ENSNLEG00000031847 Gibbon MODERN SPECIES 20 COL4A2 (ENSNLEG00000007932) COL4A1 (ENSNLEG00000007914) IRS2 (ENSNLEG00000007913) MYO16 (ENSNLEG00000007900) TNFSF13B (ENSNLEG00000007892) ABHD13 (ENSNLEG00000029855) LIG4 (ENSNLEG00000007888) ENSNLEG00000027871 ENSNLEG00000031393 ENSNLEG00000033466 ENSNLEG00000033603 ARGLU1 (ENSNLEG00000031035) EFNB2 (ENSNLEG00000033086) ENSNLEG00000031790 DAOA (ENSNLEG00000007879) ENSNLEG00000033444 ##22 SLC10A2 (ENSNLEG00000007874) METTL21EP (ENSNLEG00000032318) ENSNLEG00000007863 POGLUT2 (ENSNLEG00000007858) TEX30 (ENSNLEG00000007856) ENSNLEG00000007855 METTL21C (ENSNLEG00000007853) TPP2 (ENSNLEG00000007850) ENSNLEG00000028001 ENSNLEG00000031760 ENSNLEG00000007849 ITGBL1 (ENSNLEG00000007846) NALCN (ENSNLEG00000007834) ENSNLEG00000028471 TMTC4 (ENSNLEG00000007823) Hominidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00940000153901.a.a ENSGT00950000182926.a ENSGT00940000164182.a.b ENSGT00940000154773.o ENSGT00940000153272.a.b.o.a ENSGT00390000002915 ENSGT00940000157992 ENSGT00390000001439 ENSGT00390000000903.a.f.a ENSGT00390000007552.f.x.h.b ENSGT00390000000903.a.f.b.b ENSGT01050000244850.B ENSGT00390000005809.m.b ENSGT00950000183014.f.a.g.b.a.a ##22 ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000163415 ENSGT00390000009822 ENSGT00390000016313.a.a ENSGT00510000047602.q.a.a ENSGT00390000002222 ENSGT00940000158082.b ENSGT00940000161666 ENSGT00940000161774 ENSGT00940000160121 ENSGT00390000015907 ENSGT00390000013963 ENSGT00940000155977 ENSGT00390000006086 Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00940000153901.a.a ENSGT00950000182926.a ENSGT00940000164182.a.b ENSGT00940000154773.o ENSGT00940000153272.a.b.o.a ENSGT00390000002915 ENSGT00940000157992 ENSGT00390000001439 ENSGT00390000000903.a.f.a ENSGT00390000007552.f.x.h.b ENSGT00390000000903.a.f.b.b ENSGT01050000244850.B ENSGT00390000005809.m.b ENSGT00950000183014.f.a.g.b.a.a ##22 ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000163415 ENSGT00390000009822 ENSGT00390000016313.a.a ENSGT00510000047602.q.a.a ENSGT00390000002222 ENSGT00940000158082.b ENSGT00940000161666 ENSGT00940000161774 ENSGT00940000160121 ENSGT00390000015907 ENSGT00390000013963 ENSGT00940000155977 ENSGT00390000006086 Pan ANCESTRAL SPECIES 13 ENSGT00390000014089 ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00940000153901.a.a ENSGT00950000182926.a ENSGT00940000164182.a.b ENSGT00940000154773.o ENSGT00940000153272.a.b.o.a ENSGT00390000002915 ENSGT00940000157992 ENSGT00390000001439 ENSGT00390000007552.f.x.h.b ENSGT00390000000903.a.f.b.b ENSGT01050000244850.B ENSGT00390000005809.m.b ENSGT00950000183014.f.a.g.b.a.a ##22 ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000154668.`b ENSGT00940000163415 ENSGT00390000009822 ENSGT00390000016313.a.a ENSGT00510000047602.q.a.a ENSGT00390000002222 ENSGT00940000158082.b ENSGT00940000161666 ENSGT00940000161774 ENSGT00940000160121 ENSGT00390000015907 ENSGT00390000013963 ENSGT00940000155977 Bonobo MODERN SPECIES 20 ENSPPAG00000042375 CALD1 (ENSPPAG00000033595) BPGM (ENSPPAG00000028646) AKR1B15 (ENSPPAG00000027085) AKR1B10 (ENSPPAG00000032122) ENSPPAG00000010783 SLC35B4 (ENSPPAG00000036396) LRGUK (ENSPPAG00000026937) EXOC4 (ENSPPAG00000035477) ENSPPAG00000035760 ENSPPAG00000007374 ENSPPAG00000019389 ENSPPAG00000033968 ENSPPAG00000039044 ENSPPAG00000041347 ENSPPAG00000025319 ##22 PODXL (ENSPPAG00000033899) MKLN1 (ENSPPAG00000024879) ENSPPAG00000041979 TSGA13 (ENSPPAG00000032619) COPG2 (ENSPPAG00000033454) MEST (ENSPPAG00000042166) CEP41 (ENSPPAG00000027998) CPA1 (ENSPPAG00000038156) CPA5 (ENSPPAG00000028093) CPA4 (ENSPPAG00000024844) CPA2 (ENSPPAG00000042610) SSMEM1 (ENSPPAG00000029778) TMEM209 (ENSPPAG00000029839) KLHDC10 (ENSPPAG00000035194) ZC3HC1 (ENSPPAG00000043172) Chimpanzee MODERN SPECIES 20 TMEM140 (ENSPTRG00000046203) ENSPTRG00000043525 AGBL3 (ENSPTRG00000019722) CALD1 (ENSPTRG00000019721) BPGM (ENSPTRG00000019720) AKR1B15 (ENSPTRG00000041803) AKR1B10 (ENSPTRG00000019718) AKR1B1 (ENSPTRG00000019716) SLC35B4 (ENSPTRG00000028390) LRGUK (ENSPTRG00000019715) EXOC4 (ENSPTRG00000019712) ENSPTRG00000039432 CHCHD3 (ENSPTRG00000019711) PLXNA4 (ENSPTRG00000041884) ENSPTRG00000045758 ENSPTRG00000043790 ##22 PODXL (ENSPTRG00000019705) MKLN1 (ENSPTRG00000022979) ENSPTRG00000044862 KLF14 (ENSPTRG00000019701) TSGA13 (ENSPTRG00000033729) COPG2 (ENSPTRG00000022792) MEST (ENSPTRG00000019698) CEP41 (ENSPTRG00000052638) CPA1 (ENSPTRG00000019696) CPA5 (ENSPTRG00000019695) CPA4 (ENSPTRG00000019694) CPA2 (ENSPTRG00000019693) SSMEM1 (ENSPTRG00000019692) TMEM209 (ENSPTRG00000019691) KLHDC10 (ENSPTRG00000019687) Gorilla MODERN SPECIES 20 ENSGGOG00000025238 AGBL3 (ENSGGOG00000024585) CALD1 (ENSGGOG00000009728) BPGM (ENSGGOG00000007525) ENSGGOG00000012293 AKR1B10 (ENSGGOG00000026172) AKR1B1 (ENSGGOG00000011731) SLC35B4 (ENSGGOG00000001736) LRGUK (ENSGGOG00000022273) EXOC4 (ENSGGOG00000003951) ENSGGOG00000041288 ENSGGOG00000042744 ENSGGOG00000037349 PLXNA4 (ENSGGOG00000007146) ENSGGOG00000042691 ENSGGOG00000025653 ##22 PODXL (ENSGGOG00000000858) MKLN1 (ENSGGOG00000026878) ENSGGOG00000043449 KLF14 (ENSGGOG00000006845) TSGA13 (ENSGGOG00000008987) ENSGGOG00000008981 MEST (ENSGGOG00000000592) CEP41 (ENSGGOG00000002423) CPA1 (ENSGGOG00000002419) CPA5 (ENSGGOG00000002414) CPA4 (ENSGGOG00000040989) CPA2 (ENSGGOG00000002408) SSMEM1 (ENSGGOG00000038460) TMEM209 (ENSGGOG00000034882) KLHDC10 (ENSGGOG00000000677) Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Primates ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Hominoidea ANCESTRAL SPECIES 15 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.a.b ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000146869 Hominidae ANCESTRAL SPECIES 17 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.a.b ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b.a ENSGT00940000162639 ENSGT00910000147537 Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.a.b.a.a ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00950000182985.b.b.i.b.d.a ENSGT00940000154453.b.a.b.a ENSGT00940000162639 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.a.b.a.a ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00950000182985.b.b.i.b.d.a ENSGT00940000154453.b.a.b.a ENSGT00940000162639 Pan ANCESTRAL SPECIES 12 ENSGT00930000150950.b.m.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.a.b.a.a ##22 ENSGT00940000160642 ENSGT00390000015060.n ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.b ENSGT00940000155408 ENSGT00940000157249 ENSGT00950000182985.b.b.i.b.d.a ENSGT00940000154453.b.a.b.a ENSGT00940000162639 Bonobo MODERN SPECIES 15 ENSPPAG00000033697 CARF (ENSPPAG00000042960) NBEAL1 (ENSPPAG00000040934) CYP20A1 (ENSPPAG00000040724) ABI2 (ENSPPAG00000030582) RAPH1 (ENSPPAG00000024317) ENSPPAG00000032675 CD28 (ENSPPAG00000034998) CTLA4 (ENSPPAG00000041661) ICOS (ENSPPAG00000037117) PARD3B (ENSPPAG00000033958) NRP2 (ENSPPAG00000041062) ENSPPAG00000040957 INO80D (ENSPPAG00000017120) NDUFS1 (ENSPPAG00000032284) ENSPPAG00000033754 ##22 ENSPPAG00000031391 ZDBF2 (ENSPPAG00000038901) ADAM23 (ENSPPAG00000030147) FAM237A (ENSPPAG00000028915) DYTN (ENSPPAG00000008787) ENSPPAG00000031338 FASTKD2 (ENSPPAG00000021300) CPO (ENSPPAG00000033230) KLF7 (ENSPPAG00000035305) CREB1 (ENSPPAG00000042817) METTL21A (ENSPPAG00000041715) ENSPPAG00000010296 ENSPPAG00000029502 CCNYL1 (ENSPPAG00000034051) FZD5 (ENSPPAG00000000897) Chimpanzee MODERN SPECIES 15 WDR12 (ENSPTRG00000012823) CARF (ENSPTRG00000012824) NBEAL1 (ENSPTRG00000012828) ENSPTRG00000012829 ABI2 (ENSPTRG00000012830) RAPH1 (ENSPTRG00000012831) ENSPTRG00000043246 CD28 (ENSPTRG00000012833) ENSPTRG00000051964 CTLA4 (ENSPTRG00000044793) ICOS (ENSPTRG00000012837) PARD3B (ENSPTRG00000012838) NRP2 (ENSPTRG00000012839) INO80D (ENSPTRG00000012841) NDUFS1 (ENSPTRG00000012842) EEF1B2 (ENSPTRG00000049619) ##22 CMKLR2 (ENSPTRG00000012844) ENSPTRG00000052002 ZDBF2 (ENSPTRG00000029052) ADAM23 (ENSPTRG00000012846) FAM237A (ENSPTRG00000045763) DYTN (ENSPTRG00000042355) MDH1B (ENSPTRG00000012847) FASTKD2 (ENSPTRG00000012848) CPO (ENSPTRG00000012849) KLF7 (ENSPTRG00000012850) CREB1 (ENSPTRG00000043959) METTL21A (ENSPTRG00000012852) ENSPTRG00000045370 CCNYL1 (ENSPTRG00000012853) FZD5 (ENSPTRG00000012855) Gorilla MODERN SPECIES 15 WDR12 (ENSGGOG00000026073) ENSGGOG00000036442 NBEAL1 (ENSGGOG00000015453) CYP20A1 (ENSGGOG00000007044) ABI2 (ENSGGOG00000016384) RAPH1 (ENSGGOG00000016399) ENSGGOG00000023735 CD28 (ENSGGOG00000041735) ENSGGOG00000039900 CTLA4 (ENSGGOG00000007961) ICOS (ENSGGOG00000014097) PARD3B (ENSGGOG00000034911) NRP2 (ENSGGOG00000009537) INO80D (ENSGGOG00000015570) NDUFS1 (ENSGGOG00000001513) EEF1B2 (ENSGGOG00000007002) ##22 ENSGGOG00000042195 ZDBF2 (ENSGGOG00000023142) ENSGGOG00000024971 ADAM23 (ENSGGOG00000012509) FAM237A (ENSGGOG00000037017) DYTN (ENSGGOG00000027242) MDH1B (ENSGGOG00000002059) FASTKD2 (ENSGGOG00000002062) CPO (ENSGGOG00000016053) KLF7 (ENSGGOG00000009338) CREB1 (ENSGGOG00000024394) METTL21A (ENSGGOG00000015815) ENSGGOG00000022138 CCNYL1 (ENSGGOG00000039803) FZD5 (ENSGGOG00000042758) Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000155485 ENSGT01090000260076.b.b ENSGT00950000182900.D.d.b.a ENSGT00910000146715 ENSGT00940000163797.b ENSGT00950000182900.D.d.b.b ENSGT00390000018199.b.b.b ENSGT00730000111329.k.b.b ENSGT00940000163033.a.b ENSGT00940000159951.t ENSGT00940000159951.s ENSGT00940000163449 ENSGT00390000017840.d ENSGT00950000183199.a.a.d ENSGT00940000160633 ENSGT00950000183014.f.a.g.b.a.b.a.b.a ##22 ENSGT00550000074891 ENSGT00940000156040 ENSGT01030000234646.B.a.b ENSGT00390000013549.a.b.b.c ENSGT00390000013549.a.b.b.d ENSGT00940000158684 ENSGT00550000074801.h.d ENSGT00940000159116 ENSGT00510000048637 ENSGT00530000063666.b.h.b ENSGT00950000183121.b.b.b.b ENSGT00390000005330 ENSGT00940000153430.a.a ENSGT00940000157080 ENSGT00940000167221 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000155485 ENSGT01090000260076.b.b ENSGT00950000182900.D.d.b.a ENSGT00910000146715 ENSGT00940000163797.b ENSGT00950000182900.D.d.b.b ENSGT00390000018199.b.b.b ENSGT00730000111329.k.b.b ENSGT00940000163033.a.b ENSGT00940000159951.t ENSGT00940000159951.s ENSGT00940000163449 ENSGT00390000017840.d ENSGT00950000183199.a.a.d ENSGT00940000160633 ENSGT00950000183014.f.a.g.b.a.b.a.b.a ##22 ENSGT00550000074891 ENSGT00940000156040 ENSGT01030000234646.B.a.b ENSGT00390000013549.a.b.b.c ENSGT00390000013549.a.b.b.d ENSGT00940000158684 ENSGT00550000074801.h.d ENSGT00940000159116 ENSGT00510000048637 ENSGT00530000063666.b.h.b ENSGT00950000183121.b.b.b.b ENSGT00390000005330 ENSGT00940000153430.a.a ENSGT00940000157080 ENSGT00940000167221 Pan ANCESTRAL SPECIES 6 ENSGT00940000165012 ENSGT00940000155485 ENSGT01090000260076.b.b ENSGT00950000182900.D.d.b.a ENSGT00910000146715 ENSGT00940000163797.b ENSGT00950000182900.D.d.b.b ENSGT00390000018199.b.b.b ENSGT00730000111329.k.b.b ENSGT00940000163033.a.b ENSGT00940000159951.s ENSGT00940000163449 ENSGT00390000017840.d ENSGT00950000183199.a.a.d ENSGT00940000160633 ENSGT00950000183014.f.a.g.b.a.b.a.b.a ##22 ENSGT00550000074891 ENSGT00940000156040 ENSGT01030000234646.B.a.b ENSGT00390000013549.a.b.b.c ENSGT00390000013549.a.b.b.d ENSGT00940000158684 ENSGT00550000074801.h.d ENSGT00940000159116 ENSGT00510000048637 ENSGT00530000063666.b.h.b ENSGT00950000183121.b.b.b.b ENSGT00390000005330 ENSGT00940000153430.a.a ENSGT00940000157080 ENSGT00940000167221 Chimpanzee MODERN SPECIES 972 MAGEB4 (ENSPTRG00000043875) MAGEB2 (ENSPTRG00000021763) IL1RAPL1 (ENSPTRG00000021762) DCAF8L1 (ENSPTRG00000021759) ENSPTRG00000046700 MAGEB10 (ENSPTRG00000021760) DCAF8L2 (ENSPTRG00000041198) PPP4R3C (ENSPTRG00000048068) ENSPTRG00000051684 ENSPTRG00000040148 MAGEB18 (ENSPTRG00000021756) ENSPTRG00000049505 ENSPTRG00000045518 ENSPTRG00000052410 ARX (ENSPTRG00000045701) ENSPTRG00000041347 ##22 POLA1 (ENSPTRG00000021753) PCYT1B (ENSPTRG00000021752) PDK3 (ENSPTRG00000021750) SUPT20HL1 (ENSPTRG00000045217) SUPT20HL2 (ENSPTRG00000049617) ZFX (ENSPTRG00000021747) ENSPTRG00000050342 KLHL15 (ENSPTRG00000021744) CXorf58 (ENSPTRG00000048338) APOO (ENSPTRG00000021742) ENSPTRG00000049093 ACOT9 (ENSPTRG00000021740) PRDX4 (ENSPTRG00000049325) PTCHD1 (ENSPTRG00000021738) DDX53 (ENSPTRG00000028313) Bonobo MODERN SPECIES 369 MAGEB4 (ENSPPAG00000010695) MAGEB2 (ENSPPAG00000002810) IL1RAPL1 (ENSPPAG00000039128) DCAF8L1 (ENSPPAG00000037430) ENSPPAG00000033994 MAGEB10 (ENSPPAG00000018462) DCAF8L2 (ENSPPAG00000005336) PPP4R3C (ENSPPAG00000009146) ENSPPAG00000041187 MAGEB5 (ENSPPAG00000017989) MAGEB6B (ENSPPAG00000005092) MAGEB18 (ENSPPAG00000015746) ENSPPAG00000018404 ENSPPAG00000033295 ENSPPAG00000018949 ENSPPAG00000015413 ##22 POLA1 (ENSPPAG00000042971) PCYT1B (ENSPPAG00000028021) PDK3 (ENSPPAG00000043604) ENSPPAG00000017273 SUPT20HL1 (ENSPPAG00000036411) ZFX (ENSPPAG00000029493) EIF2S3 (ENSPPAG00000035572) KLHL15 (ENSPPAG00000040506) CXorf58 (ENSPPAG00000041195) APOO (ENSPPAG00000033503) SAT1 (ENSPPAG00000035932) ACOT9 (ENSPPAG00000037237) PRDX4 (ENSPPAG00000038998) PTCHD1 (ENSPPAG00000013963) DDX53 (ENSPPAG00000006869) Gorilla MODERN SPECIES 523 MAGEB2 (ENSGGOG00000012305) IL1RAPL1 (ENSGGOG00000003017) DCAF8L1 (ENSGGOG00000015073) ENSGGOG00000039051 MAGEB10 (ENSGGOG00000011253) DCAF8L2 (ENSGGOG00000026780) PPP4R3C (ENSGGOG00000024821) ENSGGOG00000042128 MAGEB5 (ENSGGOG00000009421) MAGEB6 (ENSGGOG00000024283) MAGEB18 (ENSGGOG00000004000) ENSGGOG00000028052 METTL1 (ENSGGOG00000023724) ENSGGOG00000025838 ARX (ENSGGOG00000023361) ENSGGOG00000022441 ##22 POLA1 (ENSGGOG00000016072) PCYT1B (ENSGGOG00000002402) PDK3 (ENSGGOG00000006157) SUPT20HL2 (ENSGGOG00000022110) ZFX (ENSGGOG00000004053) EIF2S3 (ENSGGOG00000024609) KLHL15 (ENSGGOG00000028200) CXorf58 (ENSGGOG00000016257) APOO (ENSGGOG00000001200) SAT1 (ENSGGOG00000027873) ACOT9 (ENSGGOG00000015401) PRDX4 (ENSGGOG00000026790) PTCHD1 (ENSGGOG00000044059) ENSGGOG00000036181 ENSGGOG00000026912 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000153352.A ENSGT00940000163559 ENSGT00490000043395 ENSGT00730000110989 ENSGT00940000155771 ENSGT00440000039046.a ENSGT00940000155097.x ENSGT00390000015930.y.b ENSGT00440000039958 ENSGT00940000155179.c.a ENSGT00390000017443.r ENSGT00390000009578 ENSGT00940000154586 ENSGT00940000155754 ENSGT00940000155553 ENSGT00950000183014.f.a.g.b.a.b.a.b.b ##22 ENSGT00940000161183 ENSGT00940000156399 ENSGT00730000110872.a ENSGT00940000159526 ENSGT00910000146862 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00530000065159 ENSGT00390000015280 ENSGT00940000158562 ENSGT00940000158733 ENSGT00390000006243 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000153352.A ENSGT00940000163559 ENSGT00490000043395 ENSGT00730000110989 ENSGT00940000155771 ENSGT00440000039046.a ENSGT00940000155097.x ENSGT00390000015930.y.b ENSGT00440000039958 ENSGT00940000155179.c.a ENSGT00390000017443.r ENSGT00390000009578 ENSGT00940000154586 ENSGT00940000155754 ENSGT00940000155553 ENSGT00950000183014.f.a.g.b.a.b.a.b.b ##22 ENSGT00940000161183 ENSGT00940000156399 ENSGT00730000110872.a ENSGT00940000159526 ENSGT00910000146862 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00530000065159 ENSGT00390000015280 ENSGT00940000158562 ENSGT00940000158733 ENSGT00390000006243 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 Pan ANCESTRAL SPECIES 21 ENSGT00490000043395 ENSGT00730000110989 ENSGT00940000155771 ENSGT00440000039046.a ENSGT00940000155097.w.b ENSGT00390000015930.y.b ENSGT00440000038159.p.a.a.a ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.b ENSGT00440000039958 ENSGT00940000155179.c.a ENSGT00390000017443.r ENSGT00390000009578 ENSGT00940000154586 ENSGT00940000155754 ENSGT00940000155553 ENSGT00950000183014.f.a.g.b.a.b.a.b.b ##22 ENSGT00940000161183 ENSGT00940000156399 ENSGT00730000110872.a ENSGT00940000159526 ENSGT00910000146862 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000158562 ENSGT00940000158733 ENSGT00390000006243 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 ENSGT00940000161622 Bonobo MODERN SPECIES 18 NAIP (ENSPPAG00000040028) ENSPPAG00000036744 OCLN (ENSPPAG00000000071) MARVELD2 (ENSPPAG00000031481) RAD17 (ENSPPAG00000043964) AK6 (ENSPPAG00000043237) ENSPPAG00000041239 CCDC125 (ENSPPAG00000039259) ENSPPAG00000038594 CDK7 (ENSPPAG00000028259) ENSPPAG00000031742 CENPH (ENSPPAG00000039078) CCNB1 (ENSPPAG00000043746) SLC30A5 (ENSPPAG00000033882) PIK3R1 (ENSPPAG00000042049) ENSPPAG00000025471 ##22 CD180 (ENSPPAG00000037903) MAST4 (ENSPPAG00000010615) SREK1 (ENSPPAG00000031605) ERBIN (ENSPPAG00000036043) ENSPPAG00000038376 NLN (ENSPPAG00000042758) SGTB (ENSPPAG00000039910) TRAPPC13 (ENSPPAG00000039053) TRIM23 (ENSPPAG00000027511) PPWD1 (ENSPPAG00000030221) CENPK (ENSPPAG00000026336) ADAMTS6 (ENSPPAG00000034795) CWC27 (ENSPPAG00000032408) SREK1IP1 (ENSPPAG00000036783) SHISAL2B (ENSPPAG00000040146) Chimpanzee MODERN SPECIES 18 ENSPTRG00000016953 OCLN (ENSPTRG00000016952) MARVELD2 (ENSPTRG00000016951) RAD17 (ENSPTRG00000016950) AK6 (ENSPTRG00000016949) ENSPTRG00000052212 ENSPTRG00000052641 CCDC125 (ENSPTRG00000016947) ENSPTRG00000050074 CDK7 (ENSPTRG00000016946) MRPS36 (ENSPTRG00000016944) CENPH (ENSPTRG00000016943) CCNB1 (ENSPTRG00000016942) SLC30A5 (ENSPTRG00000016941) PIK3R1 (ENSPTRG00000016940) ENSPTRG00000048817 ##22 CD180 (ENSPTRG00000016939) MAST4 (ENSPTRG00000016938) ENSPTRG00000052421 SREK1 (ENSPTRG00000016936) ERBIN (ENSPTRG00000016935) ENSPTRG00000042987 NLN (ENSPTRG00000016934) SGTB (ENSPTRG00000022683) TRAPPC13 (ENSPTRG00000016932) TRIM23 (ENSPTRG00000016931) PPWD1 (ENSPTRG00000016930) CENPK (ENSPTRG00000016929) ADAMTS6 (ENSPTRG00000016927) CWC27 (ENSPTRG00000016925) SREK1IP1 (ENSPTRG00000016924) Gorilla MODERN SPECIES 8 ENSGGOG00000043788 ENSGGOG00000026020 SMN1 (ENSGGOG00000003872) ENSGGOG00000023564 ENSGGOG00000039886 ENSGGOG00000011076 MARVELD2 (ENSGGOG00000015558) RAD17 (ENSGGOG00000015549) AK6 (ENSGGOG00000015545) ENSGGOG00000009793 CDK7 (ENSGGOG00000013349) CENPH (ENSGGOG00000001525) CCNB1 (ENSGGOG00000001523) SLC30A5 (ENSGGOG00000015127) PIK3R1 (ENSGGOG00000004248) ENSGGOG00000023413 ##22 CD180 (ENSGGOG00000008093) MAST4 (ENSGGOG00000004284) SREK1 (ENSGGOG00000004737) ERBIN (ENSGGOG00000007225) ENSGGOG00000040985 NLN (ENSGGOG00000016525) SGTB (ENSGGOG00000023754) TRAPPC13 (ENSGGOG00000015454) TRIM23 (ENSGGOG00000001144) PPWD1 (ENSGGOG00000005111) CENPK (ENSGGOG00000005105) ADAMTS6 (ENSGGOG00000016127) CWC27 (ENSGGOG00000000236) SREK1IP1 (ENSGGOG00000000235) SHISAL2B (ENSGGOG00000007489) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b.b ##22 Human MODERN SPECIES 11 FAM117B (ENSG00000138439) ICA1L (ENSG00000163596) WDR12 (ENSG00000138442) CARF (ENSG00000138380) NBEAL1 (ENSG00000144426) CYP20A1 (ENSG00000119004) ABI2 (ENSG00000138443) RAPH1 (ENSG00000173166) CD28 (ENSG00000178562) CTLA4 (ENSG00000163599) ICOS (ENSG00000163600) PARD3B (ENSG00000116117) NRP2 (ENSG00000118257) INO80D (ENSG00000114933) NDUFS1 (ENSG00000023228) EEF1B2 (ENSG00000114942) ##22 CMKLR2 (ENSG00000183671) ZDBF2 (ENSG00000204186) ADAM23 (ENSG00000114948) FAM237A (ENSG00000235118) DYTN (ENSG00000232125) MDH1B (ENSG00000138400) FASTKD2 (ENSG00000118246) CPO (ENSG00000144410) KLF7 (ENSG00000118263) CREB1 (ENSG00000118260) METTL21A (ENSG00000144401) CCNYL1 (ENSG00000163249) FZD5 (ENSG00000163251) PLEKHM3 (ENSG00000178385) CRYGD (ENSG00000118231) Orangutan MODERN SPECIES 15 ICA1L (ENSPPYG00000013088) WDR12 (ENSPPYG00000040830) CARF (ENSPPYG00000013090) NBEAL1 (ENSPPYG00000013092) CYP20A1 (ENSPPYG00000013093) ABI2 (ENSPPYG00000013094) RAPH1 (ENSPPYG00000013096) CD28 (ENSPPYG00000039922) CTLA4 (ENSPPYG00000036623) ICOS (ENSPPYG00000013100) PARD3B (ENSPPYG00000013101) NRP2 (ENSPPYG00000013102) INO80D (ENSPPYG00000013104) ENSPPYG00000038957 ##14 NDUFS1 (ENSPPYG00000013106) EEF1B2 (ENSPPYG00000013107) ##22 CMKLR2 (ENSPPYG00000013108) ZDBF2 (ENSPPYG00000013109) ADAM23 (ENSPPYG00000013110) FAM237A (ENSPPYG00000036282) DYTN (ENSPPYG00000031262) MDH1B (ENSPPYG00000013111) FASTKD2 (ENSPPYG00000013112) CPO (ENSPPYG00000013113) KLF7 (ENSPPYG00000013114) CREB1 (ENSPPYG00000013115) METTL21A (ENSPPYG00000013116) CCNYL1 (ENSPPYG00000013118) FZD5 (ENSPPYG00000013119) ENSPPYG00000013120 PLEKHM3 (ENSPPYG00000013121) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Ursidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.a.b ##22 Giant Panda MODERN SPECIES 1491 ENSAMEG00000029632 ENSAMEG00000000313 ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Equus ANCESTRAL SPECIES 18 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.b ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00950000186238 ENSGT00940000159743 ENSGT00940000159232.h.b Donkey MODERN SPECIES 24 ICA1L (ENSEASG00005002554) ENSEASG00005027147 WDR12 (ENSEASG00005002567) CARF (ENSEASG00005002591) NBEAL1 (ENSEASG00005002684) CYP20A1 (ENSEASG00005002770) ABI2 (ENSEASG00005002778) ENSEASG00005002800 CD28 (ENSEASG00005002842) CTLA4 (ENSEASG00005002849) ICOS (ENSEASG00005002854) PARD3B (ENSEASG00005002870) NRP2 (ENSEASG00005002875) INO80D (ENSEASG00005002880) NDUFS1 (ENSEASG00005002883) EEF1B2 (ENSEASG00005026194) ##22 CMKLR2 (ENSEASG00005002916) ZDBF2 (ENSEASG00005023969) ADAM23 (ENSEASG00005002928) FAM237A (ENSEASG00005002935) DYTN (ENSEASG00005002938) MDH1B (ENSEASG00005002948) FASTKD2 (ENSEASG00005002958) KLF7 (ENSEASG00005002973) CREB1 (ENSEASG00005002983) ENSEASG00005024979 CCNYL1 (ENSEASG00005003014) FZD5 (ENSEASG00005003041) ENSEASG00005003042 PLEKHM3 (ENSEASG00005003046) ENSEASG00005028742 Horse MODERN SPECIES 9 FAM117B (ENSECAG00000004249) ICA1L (ENSECAG00000009288) WDR12 (ENSECAG00000009547) CARF (ENSECAG00000017624) NBEAL1 (ENSECAG00000020049) CYP20A1 (ENSECAG00000010884) ABI2 (ENSECAG00000018236) ENSECAG00000022376 CD28 (ENSECAG00000022853) CTLA4 (ENSECAG00000003996) ICOS (ENSECAG00000006253) PARD3B (ENSECAG00000008768) NRP2 (ENSECAG00000016824) INO80D (ENSECAG00000015076) NDUFS1 (ENSECAG00000015914) EEF1B2 (ENSECAG00000016653) ##22 CMKLR2 (ENSECAG00000004408) ZDBF2 (ENSECAG00000039959) ADAM23 (ENSECAG00000018514) FAM237A (ENSECAG00000050449) DYTN (ENSECAG00000006820) MDH1B (ENSECAG00000007491) FASTKD2 (ENSECAG00000008822) KLF7 (ENSECAG00000012215) CREB1 (ENSECAG00000013667) METTL21A (ENSECAG00000017536) PLEKHM3 (ENSECAG00000008108) FZD5 (ENSECAG00000007309) ENSECAG00000039306 CRYGA (ENSECAG00000009588) ENSECAG00000049516 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Primates ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b ##22 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00940000160631 ENSGT00940000158280 ENSGT00390000016493.b.a ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00940000164610 ENSGT00390000017491.s.a.b.b ENSGT01090000260003.a.b.b.a.a.a.b.a ENSGT01000000214413.a ENSGT00390000005727.a.b.b ENSGT00940000157971 ENSGT00910000147188 ENSGT00940000155347.a.b ENSGT00940000154555.b.bb.b ENSGT00390000000360.q.b ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a.b ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000160631 ENSGT00940000158280 ENSGT00390000016493.b.a ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00940000164610 ENSGT00390000017491.s.a.b.b ENSGT01090000260003.a.b.b.a.a.a.b.a ENSGT01000000214413.a ENSGT00390000005727.a.b.b ENSGT00940000157971 ENSGT00910000147188 ENSGT00940000155347.a.b ENSGT00940000154555.b.bb.b ENSGT00390000000360.q.b ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a.b ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000158280 ENSGT00390000016493.b.a ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00940000164610 ENSGT00390000017491.s.a.b.b ENSGT01090000260003.a.b.b.a.a.a.b.a ENSGT01000000214413.a ENSGT00390000005727.a.b.b.bb.a ENSGT00940000157971 ENSGT00910000148697 ENSGT00910000147188 ENSGT00940000155347.a.b ENSGT00940000154555.b.bb.b ENSGT00390000000360.q.b ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a.b ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Macaca ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 Pig-tailed macaque MODERN SPECIES 77 LYSMD2 (ENSMNEG00000042179) TMOD2 (ENSMNEG00000043126) TMOD3 (ENSMNEG00000028320) LEO1 (ENSMNEG00000038033) MAPK6 (ENSMNEG00000036532) ENSMNEG00000031166 BCL2L10 (ENSMNEG00000025255) ENSMNEG00000034702 GNB5 (ENSMNEG00000040782) MYO5C (ENSMNEG00000010155) ENSMNEG00000023213 ENSMNEG00000027175 MYO5A (ENSMNEG00000026852) ENSMNEG00000038644 ENSMNEG00000042300 ENSMNEG00000040098 ##22 ARPP19 (ENSMNEG00000029966) ATOSA (ENSMNEG00000038367) ONECUT1 (ENSMNEG00000004202) WDR72 (ENSMNEG00000039944) UNC13C (ENSMNEG00000038451) RSL24D1 (ENSMNEG00000033431) RAB27A (ENSMNEG00000008433) PIGB (ENSMNEG00000015586) CCPG1 (ENSMNEG00000030126) PIERCE2 (ENSMNEG00000008831) DNAAF4 (ENSMNEG00000032117) PYGO1 (ENSMNEG00000021769) PRTG (ENSMNEG00000043514) NEDD4 (ENSMNEG00000032956) RFX7 (ENSMNEG00000034599) Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00940000160631 ENSGT00940000158280 ENSGT00390000016493.b.a ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00390000017491.s.a.b.b ENSGT01090000260003.a.b.b.a.a.a.b.a ENSGT01000000214413.a ENSGT00390000005727.a.b.b.bb.a ENSGT00940000157971 ENSGT00910000148697 ENSGT00910000147188 ENSGT00940000155347.a.b ENSGT00940000154555.b.bb.b ENSGT00390000000360.q.b ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a.b ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000160054 ENSGT00940000160631 ENSGT00940000158280 ENSGT00390000016493.b.a ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00390000017491.s.b.c.a.b ENSGT01090000260003.a.b.b.a.a.a.b.a ENSGT01000000214413.a ENSGT00390000005727.a.b.b.bb.a ENSGT00940000157971 ENSGT00910000148697 ENSGT00910000147188 ENSGT00940000155347.a.b ENSGT00390000000360.q.b ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a.b ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Sooty mangabey MODERN SPECIES 336 DMXL2 (ENSCATG00000029558) SCG3 (ENSCATG00000044650) LYSMD2 (ENSCATG00000040384) TMOD2 (ENSCATG00000038691) TMOD3 (ENSCATG00000028489) LEO1 (ENSCATG00000014510) MAPK6 (ENSCATG00000008200) ENSCATG00000041201 BCL2L10 (ENSCATG00000036646) ENSCATG00000039348 GNB5 (ENSCATG00000020988) MYO5C (ENSCATG00000030548) ENSCATG00000022412 ENSCATG00000021968 ENSCATG00000033147 ENSCATG00000041889 ##22 MYO5A (ENSCATG00000029795) ARPP19 (ENSCATG00000042333) ATOSA (ENSCATG00000042209) ONECUT1 (ENSCATG00000033351) WDR72 (ENSCATG00000043068) UNC13C (ENSCATG00000022600) RSL24D1 (ENSCATG00000035416) RAB27A (ENSCATG00000025844) PIGB (ENSCATG00000019266) CCPG1 (ENSCATG00000045148) PIERCE2 (ENSCATG00000034873) DNAAF4 (ENSCATG00000035181) PYGO1 (ENSCATG00000044728) PRTG (ENSCATG00000035941) NEDD4 (ENSCATG00000041989) Drill MODERN SPECIES 142 DMXL2 (ENSMLEG00000025276) SCG3 (ENSMLEG00000036493) LYSMD2 (ENSMLEG00000027601) TMOD2 (ENSMLEG00000036986) TMOD3 (ENSMLEG00000029863) ENSMLEG00000039364 LEO1 (ENSMLEG00000043547) MAPK6 (ENSMLEG00000029288) GNB5 (ENSMLEG00000035504) ENSMLEG00000044452 MYO5C (ENSMLEG00000033637) ENSMLEG00000027306 MYO5A (ENSMLEG00000036957) ENSMLEG00000038090 ENSMLEG00000044252 ##22 ARPP19 (ENSMLEG00000037217) ATOSA (ENSMLEG00000038153) ONECUT1 (ENSMLEG00000034916) WDR72 (ENSMLEG00000028035) UNC13C (ENSMLEG00000032979) RSL24D1 (ENSMLEG00000036597) RAB27A (ENSMLEG00000039719) PIGB (ENSMLEG00000037773) CCPG1 (ENSMLEG00000008809) PIERCE2 (ENSMLEG00000040368) DNAAF4 (ENSMLEG00000029485) PYGO1 (ENSMLEG00000031763) PRTG (ENSMLEG00000039567) NEDD4 (ENSMLEG00000032898) RFX7 (ENSMLEG00000015466) Rhinopithecus ANCESTRAL SPECIES 103 ENSGT00940000160631 ENSGT00940000158280 ENSGT00390000016493.b.a ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00390000017491.s.a.b.b ENSGT00390000017491.s.b.c.a.b ENSGT01090000260003.a.b.b.a.a.a.b.a ENSGT01000000214413.a ENSGT00390000005727.a.b.b ENSGT00940000157971 ENSGT00910000147188 ENSGT00910000148697 ENSGT00940000155347.a.b ENSGT00390000000360.q.b ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c Golden snub-nosed monkey MODERN SPECIES 967 SCG3 (ENSRROG00000038199) LYSMD2 (ENSRROG00000030616) TMOD2 (ENSRROG00000039670) TMOD3 (ENSRROG00000043024) LEO1 (ENSRROG00000036360) ENSRROG00000043470 ENSRROG00000045081 ENSRROG00000041670 ENSRROG00000045330 GNB5 (ENSRROG00000039416) MYO5C (ENSRROG00000044412) ENSRROG00000026589 ENSRROG00000040778 MYO5A (ENSRROG00000041419) ENSRROG00000032116 ENSRROG00000018019 ##22 ARPP19 (ENSRROG00000043622) ATOSA (ENSRROG00000031888) ENSRROG00000045385 ONECUT1 (ENSRROG00000033018) Black snub-nosed monkey MODERN SPECIES 814 LYSMD2 (ENSRBIG00000033395) TMOD2 (ENSRBIG00000035530) TMOD3 (ENSRBIG00000043218) ENSRBIG00000043764 LEO1 (ENSRBIG00000036945) ENSRBIG00000041787 ENSRBIG00000021165 BCL2L10 (ENSRBIG00000039361) GNB5 (ENSRBIG00000041062) ENSRBIG00000044666 MYO5C (ENSRBIG00000036923) ENSRBIG00000027579 MYO5A (ENSRBIG00000026539) ENSRBIG00000030700 ENSRBIG00000028995 ENSRBIG00000035194 ##22 ENSRBIG00000039917 ATOSA (ENSRBIG00000013273) ONECUT1 (ENSRBIG00000041165) ENSRBIG00000029606 ENSRBIG00000036183 Platyrrhini ANCESTRAL SPECIES 27 ENSGT00390000003488.a.a ENSGT00840000129915 ENSGT00940000158020 ENSGT00390000000096.b.a ENSGT00390000005488 ENSGT00940000160054 ENSGT00940000160631 ENSGT00940000158280 ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00940000164610 ENSGT01000000214413.a ENSGT00940000157971 ENSGT00940000155347.a.b ENSGT00390000006367.d.q ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Cebidae ANCESTRAL SPECIES 29 ENSGT00390000003488.a.a ENSGT00840000129915 ENSGT00940000158020 ENSGT00390000000096.b.a ENSGT00390000005488 ENSGT00940000160054 ENSGT00940000160631 ENSGT00940000158280 ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00940000164610 ENSGT01000000214413.a ENSGT00940000157971 ENSGT00940000155347.a.b ENSGT00390000006367.d.q ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 ENSGT00940000155174 ENSGT00950000183105.B.a.a ENSGT00940000156218 ENSGT00950000183090.A ENSGT00940000160497 ENSGT00940000154745.b ENSGT00390000004930 ENSGT00530000063948.b ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b Cebidae_a ANCESTRAL SPECIES 52 ENSGT00390000003488.a.a ENSGT00840000129915 ENSGT00940000158020 ENSGT00390000000096.b.a ENSGT00390000005488 ENSGT00940000160054 ENSGT00940000160631 ENSGT00940000158280 ENSGT00550000074952 ENSGT00940000154351.k.a ENSGT00940000164610 ENSGT01000000214413.a ENSGT00940000157971 ENSGT00940000155347.a.b ENSGT00390000006367.d.q ENSGT00950000183014.f.a.g.b.b.a.a.a ##22 ENSGT00940000154555.b.cb ENSGT00940000157573 ENSGT00950000183103.c ENSGT00940000160298 Capuchin MODERN SPECIES 325 CYP19A1 (ENSCCAG00000022272) GLDN (ENSCCAG00000027562) DMXL2 (ENSCCAG00000031705) SCG3 (ENSCCAG00000018814) LYSMD2 (ENSCCAG00000037360) TMOD2 (ENSCCAG00000022858) ENSCCAG00000038068 TMOD3 (ENSCCAG00000036997) LEO1 (ENSCCAG00000025911) MAPK6 (ENSCCAG00000026546) ENSCCAG00000031947 GNB5 (ENSCCAG00000034924) MYO5C (ENSCCAG00000032934) ENSCCAG00000032533 ENSCCAG00000034030 ENSCCAG00000025828 ##22 MYO5A (ENSCCAG00000001972) ARPP19 (ENSCCAG00000022191) FAM214A (ENSCCAG00000032913) ONECUT1 (ENSCCAG00000027805) ENSCCAG00000037326 WDR72 (ENSCCAG00000026897) Simiiformes ANCESTRAL SPECIES 4 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000163408 ENSGT00760000120430 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 ENSGT00940000160180 Catarrhini ANCESTRAL SPECIES 4 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000163408.b ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 ENSGT00940000160180 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000163408.b ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 ENSGT00940000160180 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000163408.b ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT00910000145584 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Vervet Monkey MODERN SPECIES 2 SELPLG (ENSCSAG00000002872) TMEM119 (ENSCSAG00000018943) ISCU (ENSCSAG00000002876) SART3 (ENSCSAG00000002880) FICD (ENSCSAG00000002883) CMKLR1 (ENSCSAG00000002884) WSCD2 (ENSCSAG00000002888) ENSCSAG00000002890 ASCL4 (ENSCSAG00000018942) PRDM4 (ENSCSAG00000002896) PWP1 (ENSCSAG00000002914) ABTB3 (ENSCSAG00000002923) CRY1 (ENSCSAG00000002927) MTERF2 (ENSCSAG00000018941) TMEM263 (ENSCSAG00000002931) ENSCSAG00000002943 ##22 ENSCSAG00000018940 RIC8B (ENSCSAG00000002947) RFX4 (ENSCSAG00000002952) POLR3B (ENSCSAG00000002957) TCP11L2 (ENSCSAG00000002959) CKAP4 (ENSCSAG00000002960) NUAK1 (ENSCSAG00000002962) ENSCSAG00000002964 C12orf75 (ENSCSAG00000002966) APPL2 (ENSCSAG00000002970) WASHC4 (ENSCSAG00000002978) ALDH1L2 (ENSCSAG00000002986) NOPCHAP1 (ENSCSAG00000002991) SLC41A2 (ENSCSAG00000002995) CHST11 (ENSCSAG00000002999) Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000163408.b ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT01030000234551.k.d.a.d.a.a.b ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000163408.b ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT01030000234551.k.d.a.d.a.a.b ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Cercopithecinae_d ANCESTRAL SPECIES 5 ENSGT00940000156133 ENSGT00940000156488 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT01030000234551.k.d.a.d.a.a.b ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Drill MODERN SPECIES 529 DAO (ENSMLEG00000035856) SSH1 (ENSMLEG00000038195) CORO1C (ENSMLEG00000043069) SELPLG (ENSMLEG00000011763) ENSMLEG00000029327 SART3 (ENSMLEG00000034251) FICD (ENSMLEG00000038334) CMKLR1 (ENSMLEG00000042436) WSCD2 (ENSMLEG00000038501) PRDM4 (ENSMLEG00000039607) ENSMLEG00000037152 ABTB3 (ENSMLEG00000038248) CRY1 (ENSMLEG00000038193) MTERF2 (ENSMLEG00000002757) TMEM263 (ENSMLEG00000038117) ENSMLEG00000031724 ##22 RIC8B (ENSMLEG00000037876) RFX4 (ENSMLEG00000040115) POLR3B (ENSMLEG00000029122) TCP11L2 (ENSMLEG00000041194) NUAK1 (ENSMLEG00000040273) ENSMLEG00000004567 C12orf75 (ENSMLEG00000033446) APPL2 (ENSMLEG00000030321) WASHC4 (ENSMLEG00000037120) ALDH1L2 (ENSMLEG00000039184) NOPCHAP1 (ENSMLEG00000039234) SLC41A2 (ENSMLEG00000037232) CHST11 (ENSMLEG00000032011) TXNRD1 (ENSMLEG00000030026) ENSMLEG00000029749 Macaca ANCESTRAL SPECIES 6 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000163408.b ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z ENSGT00940000157255 ENSGT01030000234551.k.d.a.d.a.a.b ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Pig-tailed macaque MODERN SPECIES 260 WSCD2 (ENSMNEG00000013314) PRDM4 (ENSMNEG00000032319) ENSMNEG00000043771 ABTB3 (ENSMNEG00000033166) CRY1 (ENSMNEG00000042763) MTERF2 (ENSMNEG00000000672) TMEM263 (ENSMNEG00000040080) ENSMNEG00000034499 ##22 RIC8B (ENSMNEG00000038905) RFX4 (ENSMNEG00000030538) ENSMNEG00000041249 POLR3B (ENSMNEG00000044393) TCP11L2 (ENSMNEG00000044893) CKAP4 (ENSMNEG00000029015) ENSMNEG00000040834 NUAK1 (ENSMNEG00000036867) C12orf75 (ENSMNEG00000027979) APPL2 (ENSMNEG00000039763) WASHC4 (ENSMNEG00000030404) ALDH1L2 (ENSMNEG00000032077) NOPCHAP1 (ENSMNEG00000031764) SLC41A2 (ENSMNEG00000032397) CHST11 (ENSMNEG00000032789) Rhinopithecus ANCESTRAL SPECIES 115 ENSGT00390000018635.d ENSGT00940000156133 ENSGT00940000156488 ENSGT00440000039754 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00940000159434 ENSGT00940000156443 ENSGT00390000017324.k ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00390000003682.jb Golden snub-nosed monkey MODERN SPECIES 715 CRY1 (ENSRROG00000035243) MTERF2 (ENSRROG00000004364) TMEM263 (ENSRROG00000032425) ENSRROG00000034964 ##22 RIC8B (ENSRROG00000043566) ENSRROG00000037236 RFX4 (ENSRROG00000028914) Black snub-nosed monkey MODERN SPECIES 903 PRDM4 (ENSRBIG00000035488) ENSRBIG00000035006 ABTB3 (ENSRBIG00000029498) CRY1 (ENSRBIG00000034749) MTERF2 (ENSRBIG00000013724) TMEM263 (ENSRBIG00000031019) ENSRBIG00000032567 ##22 RIC8B (ENSRBIG00000044148) ENSRBIG00000025373 RFX4 (ENSRBIG00000039278) Hominoidea ANCESTRAL SPECIES 5 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00940000157255 ENSGT00940000167128 ENSGT00910000145584 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Hominidae ANCESTRAL SPECIES 4 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00940000157255 ENSGT00940000167128 ENSGT00910000145584 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00940000157255 ENSGT00940000167128 ENSGT00910000145584 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00940000157255 ENSGT00940000167128 ENSGT00910000145584 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Pan ANCESTRAL SPECIES 4 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000017324 ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00940000157255 ENSGT00940000167128 ENSGT00910000145584 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 Bonobo MODERN SPECIES 3 CORO1C (ENSPPAG00000032787) SELPLG (ENSPPAG00000039506) TMEM119 (ENSPPAG00000007931) ISCU (ENSPPAG00000027482) SART3 (ENSPPAG00000041812) FICD (ENSPPAG00000031120) CMKLR1 (ENSPPAG00000031466) ENSPPAG00000029909 WSCD2 (ENSPPAG00000032685) PRDM4 (ENSPPAG00000038438) PWP1 (ENSPPAG00000029187) ENSPPAG00000040851 CRY1 (ENSPPAG00000013513) MTERF2 (ENSPPAG00000005869) TMEM263 (ENSPPAG00000006977) ENSPPAG00000042000 ##22 RIC8B (ENSPPAG00000032248) RFX4 (ENSPPAG00000037488) POLR3B (ENSPPAG00000035177) TCP11L2 (ENSPPAG00000041787) CKAP4 (ENSPPAG00000040297) NUAK1 (ENSPPAG00000030878) ENSPPAG00000037210 APPL2 (ENSPPAG00000041764) WASHC4 (ENSPPAG00000042140) ALDH1L2 (ENSPPAG00000036081) NOPCHAP1 (ENSPPAG00000016627) SLC41A2 (ENSPPAG00000042340) CHST11 (ENSPPAG00000030034) TXNRD1 (ENSPPAG00000031976) NFYB (ENSPPAG00000041525) Platyrrhini ANCESTRAL SPECIES 6 ENSGT00440000039754 ENSGT00390000017134 ENSGT00390000015813 ENSGT00900000141107 ENSGT00390000008873 ENSGT01020000230438.C ENSGT00910000148463 ENSGT00940000159434 ENSGT00940000163408 ENSGT00940000156443 ENSGT00390000017324.m ENSGT00940000156419 ENSGT00940000155455 ENSGT00530000063817.b ENSGT00390000013899.a.a ENSGT00950000183014.f.a.g.b.b.a.a.b ##22 ENSGT00390000014700.a ENSGT01050000244879.b.a.b.a ENSGT00950000183132.A ENSGT00940000157835 ENSGT00390000015968 ENSGT00710000106769.z.b ENSGT00940000157255 ENSGT00610000087444 ENSGT00940000158319 ENSGT00390000002524 ENSGT00940000158018 ENSGT00390000000376 ENSGT00950000183042.a.b ENSGT00940000159167 ENSGT00940000160180 Mas night monkey MODERN SPECIES 844 SSH1 (ENSANAG00000022027) CORO1C (ENSANAG00000008373) ISCU (ENSANAG00000026058) SART3 (ENSANAG00000025967) FICD (ENSANAG00000026246) CMKLR1 (ENSANAG00000028941) ENSANAG00000032844 WSCD2 (ENSANAG00000024935) ENSANAG00000029725 PRDM4 (ENSANAG00000024800) ENSANAG00000028362 PWP1 (ENSANAG00000013828) ABTB3 (ENSANAG00000029978) CRY1 (ENSANAG00000024975) TMEM263 (ENSANAG00000033424) ENSANAG00000026743 ##22 RIC8B (ENSANAG00000032292) RFX4 (ENSANAG00000035419) POLR3B (ENSANAG00000036735) ENSANAG00000028632 TCP11L2 (ENSANAG00000034285) CKAP4 (ENSANAG00000025249) ENSANAG00000032925 NUAK1 (ENSANAG00000034880) C12orf75 (ENSANAG00000033802) APPL2 (ENSANAG00000034797) WASHC4 (ENSANAG00000036953) ALDH1L2 (ENSANAG00000029853) NOPCHAP1 (ENSANAG00000035906) SLC41A2 (ENSANAG00000036432) CHST11 (ENSANAG00000025098) Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.b ##22 Mas night monkey MODERN SPECIES 383 DZIP3 (ENSANAG00000027803) ENSANAG00000029229 ENSANAG00000031352 ENSANAG00000030417 TRAT1 (ENSANAG00000022044) GUCA1C (ENSANAG00000028200) MORC1 (ENSANAG00000028245) ENSANAG00000032103 C3orf85 (ENSANAG00000024971) ENSANAG00000006241 ENSANAG00000019724 ENSANAG00000024186 DPPA4 (ENSANAG00000029942) ENSANAG00000028741 ENSANAG00000026205 ENSANAG00000026995 ##22 ENSANAG00000024140 ENSANAG00000025876 ENSANAG00000020057 ENSANAG00000030237 NECTIN3 (ENSANAG00000000460) ENSANAG00000022463 CD96 (ENSANAG00000027503) PHLDB2 (ENSANAG00000001762) ABHD10 (ENSANAG00000034153) TAGLN3 (ENSANAG00000028060) TMPRSS7 (ENSANAG00000025987) ENSANAG00000001366 Cebidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.a.b ##22 Bolivian squirrel monkey MODERN SPECIES 115 ENSSBOG00000018559 ENSSBOG00000023328 ENSSBOG00000020150 ##22 ENSSBOG00000029864 ENSSBOG00000029122 NECTIN3 (ENSSBOG00000019099) CD96 (ENSSBOG00000026911) PHLDB2 (ENSSBOG00000015415) ABHD10 (ENSSBOG00000009312) TAGLN3 (ENSSBOG00000029984) TMPRSS7 (ENSSBOG00000033131) ENSSBOG00000028628 GCSAM (ENSSBOG00000023001) SLC9C1 (ENSSBOG00000011995) CD200 (ENSSBOG00000027816) ENSSBOG00000034078 BTLA (ENSSBOG00000025065) ENSSBOG00000031210 Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000000685.o.b.a ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00390000001455.`b.a ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.b.b ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c ENSGT00940000157249.d ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00910000146869 Cebidae DUPLICATION Cebidae ANCESTRAL SPECIES 11 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000000685.o.b.a ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00390000001455.`b.a ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.b.b.a ##22 ENSGT00940000160642 ENSGT00950000183014.f.a.g.b.b.b.b ##22 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00910000146869 Marmoset DUPLICATION Marmoset MODERN SPECIES 2 ENSCJAG00000000824 UBTFL1 (ENSCJAG00000000817) ENSCJAG00000082145 FOLH1 (ENSCJAG00000000784) NOX4 (ENSCJAG00000000704) TYR (ENSCJAG00000000698) GRM5 (ENSCJAG00000000695) ENSCJAG00000032975 CTSC (ENSCJAG00000000679) RAB38 (ENSCJAG00000000671) ENSCJAG00000080496 ENSCJAG00000055696 TMEM135 (ENSCJAG00000000661) ENSCJAG00000086260 ENSCJAG00000086105 ENSCJAG00000076219 ##22 FZD4 (ENSCJAG00000000657) ENSCJAG00000079494 ME3 (ENSCJAG00000000649) CCDC81 (ENSCJAG00000012092) HIKESHI (ENSCJAG00000041472) EED (ENSCJAG00000014209) PICALM (ENSCJAG00000014262) ENSCJAG00000086029 CCDC83 (ENSCJAG00000014339) SYTL2 (ENSCJAG00000014359) CCDC89 (ENSCJAG00000014446) ENSCJAG00000043995 ENSCJAG00000014466 TMEM126B (ENSCJAG00000014472) DLG2 (ENSCJAG00000014492) Marmoset MODERN SPECIES 18 CARF (ENSCJAG00000005224) NBEAL1 (ENSCJAG00000031696) ENSCJAG00000081284 CYP20A1 (ENSCJAG00000039360) ABI2 (ENSCJAG00000005399) RAPH1 (ENSCJAG00000005339) CD28 (ENSCJAG00000042321) CTLA4 (ENSCJAG00000005495) ICOS (ENSCJAG00000005516) PARD3B (ENSCJAG00000005521) ENSCJAG00000076910 NRP2 (ENSCJAG00000005577) ENSCJAG00000045767 INO80D (ENSCJAG00000005682) NDUFS1 (ENSCJAG00000005725) ENSCJAG00000005805 ##22 CMKLR2 (ENSCJAG00000077852) ENSCJAG00000079037 ENSCJAG00000085853 ZDBF2 (ENSCJAG00000005812) ADAM23 (ENSCJAG00000005821) DYTN (ENSCJAG00000005926) MDH1B (ENSCJAG00000005953) FASTKD2 (ENSCJAG00000005971) ENSCJAG00000073541 CPO (ENSCJAG00000005991) ENSCJAG00000006023 CREB1 (ENSCJAG00000006039) ENSCJAG00000086572 METTL21A (ENSCJAG00000006072) CCNYL1 (ENSCJAG00000002901) Cebidae_a ANCESTRAL SPECIES 16 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000000685.o.b.a ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00390000001455.`b.a ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.b.b.a ##22 ENSGT00950000183014.f.a.g.b.b.b.b ##22 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00910000146869 ENSGT00940000161191.B Capuchin DUPLICATION Capuchin DUPLICATION Capuchin MODERN SPECIES 220 ENSCCAG00000018524 TMEM207 (ENSCCAG00000035837) CLDN16 (ENSCCAG00000022441) CLDN1 (ENSCCAG00000022266) ENSCCAG00000035543 P3H2 (ENSCCAG00000034046) ENSCCAG00000035160 TP63 (ENSCCAG00000026834) TPRG1 (ENSCCAG00000024855) ENSCCAG00000032621 ##22 LPP (ENSCCAG00000036302) ENSCCAG00000019603 BCL6 (ENSCCAG00000026327) RTP2 (ENSCCAG00000026363) SST (ENSCCAG00000024768) RTP4 (ENSCCAG00000034075) MASP1 (ENSCCAG00000032872) RTP1 (ENSCCAG00000038054) ST6GAL1 (ENSCCAG00000022394) Capuchin MODERN SPECIES 338 ENSCCAG00000019593 EIF5 (ENSCCAG00000018461) MARK3 (ENSCCAG00000027915) CKB (ENSCCAG00000036759) TRMT61A (ENSCCAG00000021969) BAG5 (ENSCCAG00000030035) COA8 (ENSCCAG00000024599) KLC1 (ENSCCAG00000018360) XRCC3 (ENSCCAG00000038040) ZFYVE21 (ENSCCAG00000027784) PPP1R13B (ENSCCAG00000033609) ENSCCAG00000035325 ##22 ENSCCAG00000012217 TDRD9 (ENSCCAG00000022528) RD3L (ENSCCAG00000034127) ASPG (ENSCCAG00000014047) KIF26A (ENSCCAG00000020022) ENSCCAG00000031711 ENSCCAG00000025725 TMEM179 (ENSCCAG00000037124) INF2 (ENSCCAG00000025214) ADSSL1 (ENSCCAG00000022580) SIVA1 (ENSCCAG00000032114) AKT1 (ENSCCAG00000035086) CEP170B (ENSCCAG00000035683) PLD4 (ENSCCAG00000023538) CLBA1 (ENSCCAG00000026964) Capuchin MODERN SPECIES 101 NBEAL1 (ENSCCAG00000021158) ENSCCAG00000031449 CYP20A1 (ENSCCAG00000036341) ABI2 (ENSCCAG00000027705) RAPH1 (ENSCCAG00000029188) ENSCCAG00000031812 CD28 (ENSCCAG00000035864) CTLA4 (ENSCCAG00000029978) ICOS (ENSCCAG00000019210) PARD3B (ENSCCAG00000034949) NRP2 (ENSCCAG00000026361) ENSCCAG00000029458 LSM5 (ENSCCAG00000032792) INO80D (ENSCCAG00000028441) NDUFS1 (ENSCCAG00000021875) ENSCCAG00000033644 ##22 ENSCCAG00000029547 ZDBF2 (ENSCCAG00000026606) ADAM23 (ENSCCAG00000031476) FAM237A (ENSCCAG00000025434) DYTN (ENSCCAG00000036386) Bolivian squirrel monkey MODERN SPECIES 55 FKTN (ENSSBOG00000033576) ENSSBOG00000025346 FSD1L (ENSSBOG00000034007) ENSSBOG00000024761 SLC44A1 (ENSSBOG00000018945) ABCA1 (ENSSBOG00000035244) NIPSNAP3B (ENSSBOG00000031338) NIPSNAP3A (ENSSBOG00000025285) OR13C4 (ENSSBOG00000031323) OR13F1 (ENSSBOG00000014730) ENSSBOG00000021219 SMC2 (ENSSBOG00000030447) ENSSBOG00000011663 ENSSBOG00000012203 CYLC2 (ENSSBOG00000034081) ENSSBOG00000027834 ##22 ENSSBOG00000027514 KCNK9 (ENSSBOG00000020412) TRAPPC9 (ENSSBOG00000033534) CHRAC1 (ENSSBOG00000030639) AGO2 (ENSSBOG00000018934) ENSSBOG00000026728 PDC (ENSSBOG00000021801) ODR4 (ENSSBOG00000023892) TPR (ENSSBOG00000025916) PRG4 (ENSSBOG00000031648) HMCN1 (ENSSBOG00000005128) IVNS1ABP (ENSSBOG00000006104) SWT1 (ENSSBOG00000028825) TRMT1L (ENSSBOG00000029282) RNF2 (ENSSBOG00000024837) Cebidae ANCESTRAL SPECIES 11 ENSGT00940000155041 ENSGT00390000000685.o.b.a ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00390000001455.`b.a ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.b.b.a ##22 ENSGT00940000160642 ENSGT00950000183014.f.a.g.b.b.b.b ##22 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00910000146869 ENSGT00940000161191.B ENSGT00940000159743 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000000685.o.b.a ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00390000001455.`b.a ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.g.b.b.b.a ##22 ENSGT00950000183014.f.a.g.b.b.b.b ##22 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235.g.a ENSGT00940000155408 ENSGT00940000157249.c ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00910000146869 ENSGT00940000161191.B ENSGT00940000159743 Bolivian squirrel monkey MODERN SPECIES 56 NBEAL1 (ENSSBOG00000032563) ENSSBOG00000030482 CYP20A1 (ENSSBOG00000025384) ABI2 (ENSSBOG00000031443) RAPH1 (ENSSBOG00000036069) ENSSBOG00000030839 CD28 (ENSSBOG00000032327) ENSSBOG00000030167 CTLA4 (ENSSBOG00000034817) ICOS (ENSSBOG00000000744) PARD3B (ENSSBOG00000029267) NRP2 (ENSSBOG00000035290) ENSSBOG00000034794 INO80D (ENSSBOG00000020878) NDUFS1 (ENSSBOG00000028426) ENSSBOG00000036258 ##22 ZDBF2 (ENSSBOG00000011111) ADAM23 (ENSSBOG00000001918) FAM237A (ENSSBOG00000033809) DYTN (ENSSBOG00000026100) MDH1B (ENSSBOG00000029880) FASTKD2 (ENSSBOG00000029513) CPO (ENSSBOG00000030310) ENSSBOG00000027628 ENSSBOG00000018885 CREB1 (ENSSBOG00000034085) ENSSBOG00000033378 CCNYL1 (ENSSBOG00000034567) ENSSBOG00000031757 PLEKHM3 (ENSSBOG00000027559) ENSSBOG00000020159 Mas night monkey MODERN SPECIES 357 NBEAL1 (ENSANAG00000029269) ENSANAG00000023562 CYP20A1 (ENSANAG00000026608) ABI2 (ENSANAG00000037183) RAPH1 (ENSANAG00000037926) CD28 (ENSANAG00000027528) CTLA4 (ENSANAG00000027709) ICOS (ENSANAG00000027294) ENSANAG00000037162 ENSANAG00000037079 PARD3B (ENSANAG00000024698) NRP2 (ENSANAG00000033490) ENSANAG00000037758 INO80D (ENSANAG00000029568) NDUFS1 (ENSANAG00000020079) ENSANAG00000024356 ##22 ZDBF2 (ENSANAG00000020305) ADAM23 (ENSANAG00000035087) FAM237A (ENSANAG00000024386) DYTN (ENSANAG00000031986) MDH1B (ENSANAG00000008683) FASTKD2 (ENSANAG00000034550) CPO (ENSANAG00000023194) KLF7 (ENSANAG00000036279) CREB1 (ENSANAG00000025888) ENSANAG00000020586 CCNYL1 (ENSANAG00000020995) FZD5 (ENSANAG00000014539) PLEKHM3 (ENSANAG00000028108) ENSANAG00000009967 CRYGD (ENSANAG00000036850) Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000161309 ENSGT00940000162976 ENSGT00940000159677.d ENSGT00940000162757.e.b.b ENSGT00940000162757.e.a ENSGT00940000157267 ENSGT00940000159041 ENSGT00950000182887.C.b.a ENSGT00940000153936.a ENSGT00940000156202.a ENSGT00950000182944.B.b ENSGT01030000234571.b.b.a.a.a ENSGT00390000008993 ENSGT00990000203615.b.a.b ENSGT00940000156108 ENSGT00950000183014.f.a.g.b.b.b ##22 ENSGT00390000012058.c.a ENSGT00940000154694.kb.a ENSGT00940000155163.b ENSGT00940000160041 ENSGT00940000159794 ENSGT00940000157183.a.b ENSGT00940000157673 ENSGT00950000183063.c.b.a.e ENSGT00950000183063.c.b.a.f.e ENSGT00390000016730.a.b ENSGT00940000160446.d ENSGT00530000063106.A ENSGT00390000015492.B ENSGT00940000157155 ENSGT00390000000263 Drill MODERN SPECIES 784 ENSMLEG00000036363 HJURP (ENSMLEG00000040399) MROH2A (ENSMLEG00000043616) ENSMLEG00000038711 ENSMLEG00000029773 UGT1A5 (ENSMLEG00000033333) USP40 (ENSMLEG00000033899) DGKD (ENSMLEG00000043481) SAG (ENSMLEG00000037213) ATG16L1 (ENSMLEG00000028574) INPP5D (ENSMLEG00000037654) NEU2 (ENSMLEG00000008037) NGEF (ENSMLEG00000043822) ENSMLEG00000013143 KCNJ13 (ENSMLEG00000029388) ENSMLEG00000024239 ##22 GIGYF2 (ENSMLEG00000035059) EFHD1 (ENSMLEG00000035452) EIF4E2 (ENSMLEG00000036508) TIGD1 (ENSMLEG00000027320) CHRNG (ENSMLEG00000030051) CHRND (ENSMLEG00000040723) PRSS56 (ENSMLEG00000040333) ECEL1 (ENSMLEG00000039300) ALPI (ENSMLEG00000041490) ENSMLEG00000033780 ENSMLEG00000031674 ENSMLEG00000044398 DIS3L2 (ENSMLEG00000042840) NPPC (ENSMLEG00000012452) COPS7B (ENSMLEG00000040501) Sooty mangabey MODERN SPECIES 176 USP40 (ENSCATG00000041169) DGKD (ENSCATG00000040893) SAG (ENSCATG00000045138) ATG16L1 (ENSCATG00000038684) INPP5D (ENSCATG00000014660) NEU2 (ENSCATG00000032044) NGEF (ENSCATG00000042633) SNORC (ENSCATG00000030187) KCNJ13 (ENSCATG00000032603) ENSCATG00000025233 ##22 GIGYF2 (ENSCATG00000035836) EFHD1 (ENSCATG00000036158) EIF4E2 (ENSCATG00000035393) TIGD1 (ENSCATG00000021481) CHRNG (ENSCATG00000040459) CHRND (ENSCATG00000004199) PRSS56 (ENSCATG00000026127) ECEL1 (ENSCATG00000033582) ALPI (ENSCATG00000041556) ENSCATG00000026734 ENSCATG00000042081 ENSCATG00000040992 DIS3L2 (ENSCATG00000044446) NPPC (ENSCATG00000015829) COPS7B (ENSCATG00000037173) Macaca ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Pig-tailed macaque MODERN SPECIES 525 TRPM8 (ENSMNEG00000035109) HJURP (ENSMNEG00000040615) MROH2A (ENSMNEG00000007484) UGT1A1 (ENSMNEG00000029757) ENSMNEG00000040610 USP40 (ENSMNEG00000005725) DGKD (ENSMNEG00000044349) SAG (ENSMNEG00000041266) ATG16L1 (ENSMNEG00000030017) INPP5D (ENSMNEG00000028451) NEU2 (ENSMNEG00000028399) NGEF (ENSMNEG00000035677) SNORC (ENSMNEG00000016058) GIGYF2 (ENSMNEG00000020507) KCNJ13 (ENSMNEG00000042375) ENSMNEG00000042625 ##22 EFHD1 (ENSMNEG00000029930) EIF4E2 (ENSMNEG00000038383) TIGD1 (ENSMNEG00000015811) CHRNG (ENSMNEG00000026483) CHRND (ENSMNEG00000037306) PRSS56 (ENSMNEG00000032780) ECEL1 (ENSMNEG00000043075) ALPI (ENSMNEG00000033857) ENSMNEG00000030189 ENSMNEG00000032015 DIS3L2 (ENSMNEG00000037549) ENSMNEG00000032527 NPPC (ENSMNEG00000032377) COPS7B (ENSMNEG00000040153) PDE6D (ENSMNEG00000031572) Hominoidea ANCESTRAL SPECIES ENSGT00950000183014.f.a.g.b.b.b ##22 Gibbon MODERN SPECIES 14 ENSNLEG00000008495 HJURP (ENSNLEG00000008476) ENSNLEG00000008474 ENSNLEG00000033601 UGT1A4 (ENSNLEG00000008395) ENSNLEG00000008375 DGKD (ENSNLEG00000008355) SAG (ENSNLEG00000008337) ATG16L1 (ENSNLEG00000008221) INPP5D (ENSNLEG00000008201) NEU2 (ENSNLEG00000014420) NGEF (ENSNLEG00000014408) SNORC (ENSNLEG00000014403) KCNJ13 (ENSNLEG00000014398) GIGYF2 (ENSNLEG00000014353) ENSNLEG00000027182 ##22 ENSNLEG00000014349 EIF4E2 (ENSNLEG00000014333) TIGD1 (ENSNLEG00000018314) CHRNG (ENSNLEG00000014319) CHRND (ENSNLEG00000014298) ENSNLEG00000014297 ECEL1 (ENSNLEG00000014253) ALPI (ENSNLEG00000026680) ENSNLEG00000014232 DIS3L2 (ENSNLEG00000014226) ENSNLEG00000014217 ENSNLEG00000034944 ENSNLEG00000014197 ENSNLEG00000034241 ENSNLEG00000030819 Eutheria ANCESTRAL SPECIES 10 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT01090000260046 ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Tree shrew MODERN SPECIES 512 NDUFS1 (ENSTBEG00000004647) EEF1B2 (ENSTBEG00000005657) ##22 CMKLR2 (ENSTBEG00000006019) Glires ANCESTRAL SPECIES 14 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Lagomorpha ANCESTRAL SPECIES 13 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041.ob ENSGT00940000155041.nb ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.a ENSGT00940000158720.d Rabbit DUPLICATION Rabbit MODERN SPECIES 18 ENSOCUG00000010497 WDR12 (ENSOCUG00000002961) CARF (ENSOCUG00000005335) ENSOCUG00000027134 NBEAL1 (ENSOCUG00000008716) CYP20A1 (ENSOCUG00000008054) ENSOCUG00000008062 ENSOCUG00000016722 CD28 (ENSOCUG00000016134) ENSOCUG00000030918 CTLA4 (ENSOCUG00000017274) ICOS (ENSOCUG00000001858) PARD3B (ENSOCUG00000007959) NRP2 (ENSOCUG00000007978) INO80D (ENSOCUG00000014786) ENSOCUG00000009848 ##22 NDUFS1 (ENSOCUG00000012368) CMKLR2 (ENSOCUG00000012384) ENSOCUG00000024602 ENSOCUG00000009421 ADAM23 (ENSOCUG00000010659) DYTN (ENSOCUG00000021490) MDH1B (ENSOCUG00000010506) ENSOCUG00000010515 CPO (ENSOCUG00000009806) KLF7 (ENSOCUG00000009813) ENSOCUG00000027419 CREB1 (ENSOCUG00000005427) ENSOCUG00000005431 ENSOCUG00000015013 FZD5 (ENSOCUG00000027916) Rabbit MODERN SPECIES 10 RANGRF (ENSOCUG00000023954) SLC25A35 (ENSOCUG00000010841) ARHGEF15 (ENSOCUG00000010844) ENSOCUG00000015085 ENSOCUG00000035261 RPL26 (ENSOCUG00000006538) RNF222 (ENSOCUG00000016613) NDEL1 (ENSOCUG00000016614) MYH10 (ENSOCUG00000016624) CCDC42 (ENSOCUG00000005187) ENSOCUG00000016714 MFSD6L (ENSOCUG00000004045) PIK3R6 (ENSOCUG00000004052) PIK3R5 (ENSOCUG00000022712) NTN1 (ENSOCUG00000027183) ENSOCUG00000028136 ##22 ENSOCUG00000039338 ENSOCUG00000038129 CFAP52 (ENSOCUG00000015464) USP43 (ENSOCUG00000015475) DHRS7C (ENSOCUG00000008066) GLP2R (ENSOCUG00000015492) RCVRN (ENSOCUG00000015504) GAS7 (ENSOCUG00000011000) MYH13 (ENSOCUG00000010207) MYH8 (ENSOCUG00000010229) MYH4 (ENSOCUG00000029652) MYH1 (ENSOCUG00000026636) ENSOCUG00000004509 SCO1 (ENSOCUG00000015719) ADPRM (ENSOCUG00000004522) Pika MODERN SPECIES 385 INO80D (ENSOPRG00000017152) NDUFS1 (ENSOPRG00000017156) EEF1B2 (ENSOPRG00000017163) ##22 Rodentia ANCESTRAL SPECIES 14 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Rodentia_B ANCESTRAL SPECIES 12 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a Kangaroo rat MODERN SPECIES 62 ENSDORG00000003669 ##22 Myomorpha ANCESTRAL SPECIES 10 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a Lesser Egyptian jerboa MODERN SPECIES 52 Fam117b (ENSJJAG00000019496) Ica1l (ENSJJAG00000022732) ENSJJAG00000000724 Carf (ENSJJAG00000014072) Nbeal1 (ENSJJAG00000023210) Cyp20a1 (ENSJJAG00000007155) Abi2 (ENSJJAG00000006918) ENSJJAG00000023840 Cd28 (ENSJJAG00000001227) Ctla4 (ENSJJAG00000013112) Icos (ENSJJAG00000007794) Pard3b (ENSJJAG00000015271) Nrp2 (ENSJJAG00000016788) Ino80d (ENSJJAG00000018074) Ndufs1 (ENSJJAG00000013916) Eef1b2 (ENSJJAG00000004915) ##22 Adam23 (ENSJJAG00000016078) Dytn (ENSJJAG00000016868) Mdh1b (ENSJJAG00000010713) Fastkd2 (ENSJJAG00000000986) ENSJJAG00000021742 Klf7 (ENSJJAG00000011480) Creb1 (ENSJJAG00000013846) ENSJJAG00000023618 Ccnyl1 (ENSJJAG00000024111) Fzd5 (ENSJJAG00000004014) Plekhm3 (ENSJJAG00000012116) ENSJJAG00000021625 Crygd (ENSJJAG00000014362) Crygc (ENSJJAG00000023810) ENSJJAG00000013715 Muroidea ANCESTRAL SPECIES 20 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a ENSGT00940000163272.a.b Upper Galilee mountains blind mole rat MODERN SPECIES 1322 Nbeal1 (ENSNGAG00000020072) Cyp20a1 (ENSNGAG00000020232) Abi2 (ENSNGAG00000012110) ENSNGAG00000001490 Cd28 (ENSNGAG00000015761) Ctla4 (ENSNGAG00000019017) ENSNGAG00000010975 Icos (ENSNGAG00000015325) Pard3b (ENSNGAG00000019309) Nrp2 (ENSNGAG00000014175) Ino80d (ENSNGAG00000007370) Ndufs1 (ENSNGAG00000016531) Eef1b2 (ENSNGAG00000020801) ##22 Cmklr2 (ENSNGAG00000014936) Zdbf2 (ENSNGAG00000010826) Adam23 (ENSNGAG00000014933) Mdh1b (ENSNGAG00000000139) Fastkd2 (ENSNGAG00000001279) Klf7 (ENSNGAG00000016561) Creb1 (ENSNGAG00000018967) Mettl21a (ENSNGAG00000013752) ENSNGAG00000014167 Ccnyl1 (ENSNGAG00000004870) Fzd5 (ENSNGAG00000014954) Plekhm3 (ENSNGAG00000007962) Crygc (ENSNGAG00000017419) D630023F18Rik (ENSNGAG00000013154) Idh1 (ENSNGAG00000006870) Muroidea_A ANCESTRAL SPECIES 19 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a ENSGT00940000163272.a.b Cricetidae ANCESTRAL SPECIES 19 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a ENSGT00940000163272.a.b Cricetinae ANCESTRAL SPECIES 3 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a ENSGT00940000163272.a.b Chinese hamster chok1gshd MODERN SPECIES 1 Fam117b (ENSCGRG00001020456) Ica1l (ENSCGRG00001018928) WDR12 (ENSCGRG00001016494) Carf (ENSCGRG00001016848) Nbeal1 (ENSCGRG00001018313) Cyp20a1 (ENSCGRG00001018508) Abi2 (ENSCGRG00001017572) Raph1 (ENSCGRG00001019075) Cd28 (ENSCGRG00001021553) Ctla4 (ENSCGRG00001017244) Icos (ENSCGRG00001016804) Pard3b (ENSCGRG00001023180) Nrp2 (ENSCGRG00001001140) Ino80d (ENSCGRG00001020225) Ndufs1 (ENSCGRG00001018185) Eef1b2 (ENSCGRG00001017503) ##22 Cmklr2 (ENSCGRG00001010463) Zdbf2 (ENSCGRG00001018156) Adam23 (ENSCGRG00001021362) Gm39653 (ENSCGRG00001017288) Dytn (ENSCGRG00001017611) Mdh1b (ENSCGRG00001017642) Fastkd2 (ENSCGRG00001020432) Klf7 (ENSCGRG00001018794) ENSCGRG00001018665 Creb1 (ENSCGRG00001018838) Mettl21a (ENSCGRG00001017438) Ccnyl1 (ENSCGRG00001017467) Fzd5 (ENSCGRG00001010794) Plekhm3 (ENSCGRG00001023068) ENSCGRG00001020657 Golden Hamster MODERN SPECIES 640 Ica1l (ENSMAUG00000013926) Wdr12 (ENSMAUG00000001279) Carf (ENSMAUG00000009693) ENSMAUG00000007926 ENSMAUG00000001805 ENSMAUG00000007020 Abi2 (ENSMAUG00000016724) ENSMAUG00000008616 Cd28 (ENSMAUG00000020132) Ctla4 (ENSMAUG00000017208) Icos (ENSMAUG00000019187) Pard3b (ENSMAUG00000019516) Nrp2 (ENSMAUG00000020662) Ino80d (ENSMAUG00000012087) ENSMAUG00000017015 Eef1b2 (ENSMAUG00000011478) ##22 Cmklr2 (ENSMAUG00000009931) Zdbf2 (ENSMAUG00000017491) Adam23 (ENSMAUG00000012410) Dytn (ENSMAUG00000021422) Mdh1b (ENSMAUG00000016431) Fastkd2 (ENSMAUG00000009136) Klf7 (ENSMAUG00000022037) Creb1 (ENSMAUG00000018215) Mettl21a (ENSMAUG00000020877) Fzd5 (ENSMAUG00000022033) Plekhm3 (ENSMAUG00000021638) ENSMAUG00000022028 Crygd (ENSMAUG00000020101) Crygc (ENSMAUG00000009964) ENSMAUG00000022086 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.a ENSGT00940000163272.a.b Northern American deer mouse MODERN SPECIES 4 Ica1l (ENSPEMG00000021278) Wdr12 (ENSPEMG00000022189) Carf (ENSPEMG00000020983) ENSPEMG00000028509 Nbeal1 (ENSPEMG00000029402) Cyp20a1 (ENSPEMG00000023627) Abi2 (ENSPEMG00000020443) Raph1 (ENSPEMG00000022086) Cd28 (ENSPEMG00000028537) Ctla4 (ENSPEMG00000020722) Icos (ENSPEMG00000015472) Pard3b (ENSPEMG00000020745) Nrp2 (ENSPEMG00000020944) Ino80d (ENSPEMG00000020652) Ndufs1 (ENSPEMG00000020453) Eef1b2 (ENSPEMG00000016842) ##22 Cmklr2 (ENSPEMG00000000909) Zdbf2 (ENSPEMG00000029531) Adam23 (ENSPEMG00000020455) Gm39653 (ENSPEMG00000029994) Dytn (ENSPEMG00000020630) Mdh1b (ENSPEMG00000012142) Fastkd2 (ENSPEMG00000010593) ENSPEMG00000029845 Klf7 (ENSPEMG00000028836) Creb1 (ENSPEMG00000012416) Mettl21a (ENSPEMG00000027520) Ccnyl1 (ENSPEMG00000022762) Fzd5 (ENSPEMG00000026977) Plekhm3 (ENSPEMG00000009141) ENSPEMG00000029603 Prairie vole MODERN SPECIES 354 Dner (ENSMOCG00000020102) Trip12 (ENSMOCG00000021899) Fbxo36 (ENSMOCG00000015360) Slc16a14 (ENSMOCG00000006969) Nbeal1 (ENSMOCG00000015319) Abi2 (ENSMOCG00000013762) Raph1 (ENSMOCG00000016577) Cd28 (ENSMOCG00000003240) Ctla4 (ENSMOCG00000018484) ENSMOCG00000017292 Icos (ENSMOCG00000008578) Pard3b (ENSMOCG00000021107) Nrp2 (ENSMOCG00000018160) Ino80d (ENSMOCG00000022487) Ndufs1 (ENSMOCG00000018918) Eef1b2 (ENSMOCG00000004803) ##22 Zdbf2 (ENSMOCG00000021962) Adam23 (ENSMOCG00000012227) ENSMOCG00000001238 Dytn (ENSMOCG00000015652) Mdh1b (ENSMOCG00000001314) Fastkd2 (ENSMOCG00000019859) ENSMOCG00000008631 Klf7 (ENSMOCG00000009593) Creb1 (ENSMOCG00000002192) Mettl21a (ENSMOCG00000017410) Ccnyl1 (ENSMOCG00000016018) Fzd5 (ENSMOCG00000013581) Plekhm3 (ENSMOCG00000013149) ENSMOCG00000018497 Crygd (ENSMOCG00000018181) Murinae ANCESTRAL SPECIES 9 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.b ENSGT00940000159232.h.b Mus ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000153677.u.b.b.a.a.b Mus_A ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a.c ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000153677.u.b.b.a.a.b Mus_B ANCESTRAL SPECIES 7 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089.l ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a.c ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000153677.u.b.b.a.a.b Mouse MODERN SPECIES Fam117b (ENSMUSG00000041040) Ica1l (ENSMUSG00000026018) Wdr12 (ENSMUSG00000026019) Carf (ENSMUSG00000026017) Nbeal1 (ENSMUSG00000073664) Cyp20a1 (ENSMUSG00000049439) Abi2 (ENSMUSG00000026782) Raph1 (ENSMUSG00000026014) Cd28 (ENSMUSG00000026012) Ctla4 (ENSMUSG00000026011) Icos (ENSMUSG00000026009) Pard3b (ENSMUSG00000052062) Nrp2 (ENSMUSG00000025969) Ino80d (ENSMUSG00000040865) Ndufs1 (ENSMUSG00000025968) Eef1b2 (ENSMUSG00000025967) ##22 Cmklr2 (ENSMUSG00000046856) Zdbf2 (ENSMUSG00000027520) Adam23 (ENSMUSG00000025964) Gm39653 (ENSMUSG00000115378) Dytn (ENSMUSG00000069085) Mdh1b (ENSMUSG00000025963) Fastkd2 (ENSMUSG00000025962) Klf7 (ENSMUSG00000025959) Creb1 (ENSMUSG00000025958) Mettl21a (ENSMUSG00000025956) Ccnyl1 (ENSMUSG00000070871) Fzd5 (ENSMUSG00000045005) Plekhm3 (ENSMUSG00000051344) Akr1cl (ENSMUSG00000025955) Cryge (ENSMUSG00000070870) Mus_C ANCESTRAL SPECIES 1 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089.l ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00860000135862 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a.c ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000153677.u.b.b.a.a.b Steppe mouse MODERN SPECIES 44 Carf (ENSMSIG00000010210) ENSMSIG00000010287 Nbeal1 (ENSMSIG00000010304) Cyp20a1 (ENSMSIG00000010618) ENSMSIG00000010702 Raph1 (ENSMSIG00000010756) Cd28 (ENSMSIG00000011356) ENSMSIG00000011370 Ctla4 (ENSMSIG00000011388) Icos (ENSMSIG00000011424) Pard3b (ENSMSIG00000011469) ENSMSIG00000011764 Nrp2 (ENSMSIG00000011775) Ino80d (ENSMSIG00000012604) Ndufs1 (ENSMSIG00000012674) Eef1b2 (ENSMSIG00000012804) ##22 Cmklr2 (ENSMSIG00000012880) Zdbf2 (ENSMSIG00000012889) ENSMSIG00000012937 Adam23 (ENSMSIG00000012957) ENSMSIG00000013264 Gm39653 (ENSMSIG00000013270) Dytn (ENSMSIG00000013289) spretus MODERN SPECIES MGP_SPRETEiJ_G0014990 Ica1l (MGP_SPRETEiJ_G0014991) Wdr12 (MGP_SPRETEiJ_G0014992) Carf (MGP_SPRETEiJ_G0014993) Nbeal1 (MGP_SPRETEiJ_G0014994) Cyp20a1 (MGP_SPRETEiJ_G0014995) Abi2 (MGP_SPRETEiJ_G0014996) Raph1 (MGP_SPRETEiJ_G0014997) Cd28 (MGP_SPRETEiJ_G0014998) Ctla4 (MGP_SPRETEiJ_G0014999) Icos (MGP_SPRETEiJ_G0015000) Pard3b (MGP_SPRETEiJ_G0015001) Nrp2 (MGP_SPRETEiJ_G0015002) Ino80d (MGP_SPRETEiJ_G0015003) Ndufs1 (MGP_SPRETEiJ_G0015004) Eef1b2 (MGP_SPRETEiJ_G0015005) ##22 Cmklr2 (MGP_SPRETEiJ_G0015006) Zdbf2 (MGP_SPRETEiJ_G0015007) Adam23 (MGP_SPRETEiJ_G0015008) Dytn (MGP_SPRETEiJ_G0015009) Mdh1b (MGP_SPRETEiJ_G0015010) Fastkd2 (MGP_SPRETEiJ_G0015011) MGP_SPRETEiJ_G0015012 Klf7 (MGP_SPRETEiJ_G0015013) Creb1 (MGP_SPRETEiJ_G0015014) Mettl21a (MGP_SPRETEiJ_G0015015) Ccnyl1 (MGP_SPRETEiJ_G0015016) Fzd5 (MGP_SPRETEiJ_G0015017) Plekhm3 (MGP_SPRETEiJ_G0015018) Akr1cl (MGP_SPRETEiJ_G0015019) Cryge (MGP_SPRETEiJ_G0015020) Ryukyu mouse MODERN SPECIES Fam117b (MGP_CAROLIEiJ_G0014183) MGP_CAROLIEiJ_G0014184 MGP_CAROLIEiJ_G0014185 Carf (MGP_CAROLIEiJ_G0014186) Nbeal1 (MGP_CAROLIEiJ_G0014187) Cyp20a1 (MGP_CAROLIEiJ_G0014188) Abi2 (MGP_CAROLIEiJ_G0014189) Raph1 (MGP_CAROLIEiJ_G0014190) Cd28 (MGP_CAROLIEiJ_G0014191) Ctla4 (MGP_CAROLIEiJ_G0014192) Icos (MGP_CAROLIEiJ_G0014193) Pard3b (MGP_CAROLIEiJ_G0014194) Nrp2 (MGP_CAROLIEiJ_G0014195) Ino80d (MGP_CAROLIEiJ_G0014196) Ndufs1 (MGP_CAROLIEiJ_G0014197) Eef1b2 (MGP_CAROLIEiJ_G0014198) ##22 Cmklr2 (MGP_CAROLIEiJ_G0014199) Zdbf2 (MGP_CAROLIEiJ_G0014200) Adam23 (MGP_CAROLIEiJ_G0014201) Dytn (MGP_CAROLIEiJ_G0014202) Mdh1b (MGP_CAROLIEiJ_G0014203) Fastkd2 (MGP_CAROLIEiJ_G0014204) MGP_CAROLIEiJ_G0014205 Klf7 (MGP_CAROLIEiJ_G0014206) Creb1 (MGP_CAROLIEiJ_G0014207) Mettl21a (MGP_CAROLIEiJ_G0014208) Ccnyl1 (MGP_CAROLIEiJ_G0014209) Fzd5 (MGP_CAROLIEiJ_G0014210) Plekhm3 (MGP_CAROLIEiJ_G0014211) Akr1cl (MGP_CAROLIEiJ_G0014212) Cryge (MGP_CAROLIEiJ_G0014213) Shrew mouse MODERN SPECIES 18 Fam117b (MGP_PahariEiJ_G0027421) MGP_PahariEiJ_G0027422 MGP_PahariEiJ_G0027423 Carf (MGP_PahariEiJ_G0027424) MGP_PahariEiJ_G0027425 Cyp20a1 (MGP_PahariEiJ_G0027426) Abi2 (MGP_PahariEiJ_G0027427) Raph1 (MGP_PahariEiJ_G0027428) Cd28 (MGP_PahariEiJ_G0027429) Ctla4 (MGP_PahariEiJ_G0027430) MGP_PahariEiJ_G0027431 Pard3b (MGP_PahariEiJ_G0027432) Nrp2 (MGP_PahariEiJ_G0027433) Ino80d (MGP_PahariEiJ_G0027434) MGP_PahariEiJ_G0027435 Eef1b2 (MGP_PahariEiJ_G0027436) ##22 Cmklr2 (MGP_PahariEiJ_G0027437) Zdbf2 (MGP_PahariEiJ_G0027438) Adam23 (MGP_PahariEiJ_G0027439) Dytn (MGP_PahariEiJ_G0027440) Mdh1b (MGP_PahariEiJ_G0027441) Fastkd2 (MGP_PahariEiJ_G0027442) MGP_PahariEiJ_G0027443 Klf7 (MGP_PahariEiJ_G0027444) Creb1 (MGP_PahariEiJ_G0027445) Mettl21a (MGP_PahariEiJ_G0027446) Ccnyl1 (MGP_PahariEiJ_G0027447) Fzd5 (MGP_PahariEiJ_G0027448) Plekhm3 (MGP_PahariEiJ_G0027449) Akr1cl (MGP_PahariEiJ_G0027450) MGP_PahariEiJ_G0027451 Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 19 Ica1l (ENSRNOG00000017258) Wdr12 (ENSRNOG00000017340) Carf (ENSRNOG00000017491) Nbeal1 (ENSRNOG00000021525) Cyp20a1 (ENSRNOG00000017631) Abi2 (ENSRNOG00000017707) Raph1 (ENSRNOG00000014722) Cd28 (ENSRNOG00000010283) Ctla4 (ENSRNOG00000054129) Icos (ENSRNOG00000046196) Pard3b (ENSRNOG00000024345) Nrp2 (ENSRNOG00000031232) Rpl37-ps5 (ENSRNOG00000033803) Ino80d (ENSRNOG00000024272) Ndufs1 (ENSRNOG00000011849) Eef1b2 (ENSRNOG00000024186) ##22 Cmklr2 (ENSRNOG00000045532) Zdbf2 (ENSRNOG00000024114) Adam23 (ENSRNOG00000012424) Fam237a (ENSRNOG00000054699) Dytn (ENSRNOG00000042181) Mdh1b (ENSRNOG00000012891) ENSRNOG00000063009 Fastkd2 (ENSRNOG00000023923) ENSRNOG00000063607 Klf7 (ENSRNOG00000046242) LOC103690545 (ENSRNOG00000064370) Creb1 (ENSRNOG00000013412) Mettl21a (ENSRNOG00000014212) Ccnyl1 (ENSRNOG00000023807) Fzd5 (ENSRNOG00000014678) Rat MODERN SPECIES Ak3 (ENSRNOG00000052506) Rcl1 (ENSRNOG00000015491) Jak2 (ENSRNOG00000059968) Insl6 (ENSRNOG00000015868) Rln1 (ENSRNOG00000060867) Plgrkt (ENSRNOG00000015932) Cd274 (ENSRNOG00000016112) Pdcd1lg2 (ENSRNOG00000016136) Ric1 (ENSRNOG00000016172) Ermp1 (ENSRNOG00000010915) Mlana (ENSRNOG00000036608) RGD1311595 (ENSRNOG00000026942) Ranbp6 (ENSRNOG00000053859) Il33 (ENSRNOG00000016456) Tpd52l3 (ENSRNOG00000042441) AABR07006688.2 (ENSRNOG00000031628) ##22 AABR07006688.1 (ENSRNOG00000030934) Uhrf2 (ENSRNOG00000011308) Gldc (ENSRNOG00000011599) Chchd4 (ENSRNOG00000069157) AABR07006691.1 (ENSRNOG00000011637) Dkk1 (ENSRNOG00000048688) Prkg1 (ENSRNOG00000053728) Cstf2t (ENSRNOG00000070422) A1cf (ENSRNOG00000033195) Asah2 (ENSRNOG00000012196) Sgms1 (ENSRNOG00000012536) AABR07006740.1 (ENSRNOG00000058869) Minpp1 (ENSRNOG00000011287) Papss2 (ENSRNOG00000011068) Atad1 (ENSRNOG00000010861) Rat MODERN SPECIES 12 Tacr2 (ENSRNOG00000050658) Hk1 (ENSRNOG00000046891) Hkdc1 (ENSRNOG00000049045) Supv3l1 (ENSRNOG00000000392) Vps26a (ENSRNOG00000030683) Srgn (ENSRNOG00000000394) Kifbp (ENSRNOG00000000395) Ddx21 (ENSRNOG00000043099) Ddx50 (ENSRNOG00000000396) Stox1 (ENSRNOG00000023712) Ccar1 (ENSRNOG00000000397) Rsph4a (ENSRNOG00000049696) Zup1 (ENSRNOG00000000398) Kpna5 (ENSRNOG00000030109) Gprc6a (ENSRNOG00000000401) ENSRNOG00000070167 ##22 Rfx6 (ENSRNOG00000027949) Vgll2 (ENSRNOG00000000405) Ros1 (ENSRNOG00000000406) LOC100911055 (ENSRNOG00000033891) Dcbld1 (ENSRNOG00000000407) Gopc (ENSRNOG00000000408) ENSRNOG00000070377 Nepn (ENSRNOG00000000410) Nus1 (ENSRNOG00000000411) Slc35f1 (ENSRNOG00000000412) ENSRNOG00000066051 Cep85l (ENSRNOG00000000414) ENSRNOG00000066018 Mcm9 (ENSRNOG00000003281) ENSRNOG00000064723 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 Hystricomorpha ANCESTRAL SPECIES 28 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b ENSGT00940000159232.h.b Hystricomorpha_a ANCESTRAL SPECIES 67 ENSGT00940000156449 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232.h.b ENSGT00940000156190.g ENSGT00940000156190.h ENSGT00390000004840 Guinea pig MODERN SPECIES 13 ICA1L (ENSCPOG00000009349) WDR12 (ENSCPOG00000008824) CARF (ENSCPOG00000008827) NBEAL1 (ENSCPOG00000008009) CYP20A1 (ENSCPOG00000009758) ABI2 (ENSCPOG00000007562) RAPH1 (ENSCPOG00000020239) CD28 (ENSCPOG00000035938) CTLA4 (ENSCPOG00000019534) ICOS (ENSCPOG00000030931) ENSCPOG00000030358 PARD3B (ENSCPOG00000004380) NRP2 (ENSCPOG00000004390) ENSCPOG00000010964 NDUFS1 (ENSCPOG00000005555) EEF1B2 (ENSCPOG00000014496) ##22 ADAM23 (ENSCPOG00000005871) MDH1B (ENSCPOG00000005608) FASTKD2 (ENSCPOG00000005624) KLF7 (ENSCPOG00000009080) CREB1 (ENSCPOG00000010778) METTL21A (ENSCPOG00000034803) ENSCPOG00000035156 FZD5 (ENSCPOG00000038146) PLEKHM3 (ENSCPOG00000004119) CRYGC (ENSCPOG00000000186) ENSCPOG00000022025 CRYGA (ENSCPOG00000015047) C2orf80 (ENSCPOG00000015050) IDH1 (ENSCPOG00000013587) PIKFYVE (ENSCPOG00000003863) Hystricomorpha_b ANCESTRAL SPECIES 52 ENSGT00940000156449 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232.h.b ENSGT00940000156190.g ENSGT00940000156190.h ENSGT00390000004840 Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 139 PITPNM3 (ENSODEG00000016603) ENSODEG00000017470 ENSODEG00000016487 ENSODEG00000017372 SLC13A5 (ENSODEG00000016589) FBXO39 (ENSODEG00000016674) TEKT1 (ENSODEG00000016783) SMTNL2 (ENSODEG00000016870) GGT6 (ENSODEG00000016629) MYBBP1A (ENSODEG00000016740) SPNS2 (ENSODEG00000016391) SPNS3 (ENSODEG00000018492) UBE2G1 (ENSODEG00000016430) ANKFY1 (ENSODEG00000016642) ENSODEG00000016917 ENSODEG00000016632 ##22 ZZEF1 (ENSODEG00000016283) ATP2A3 (ENSODEG00000016258) P2RX1 (ENSODEG00000016566) CAMKK1 (ENSODEG00000016518) NCBP3 (ENSODEG00000016617) HASPIN (ENSODEG00000016330) ITGAE (ENSODEG00000016419) P2RX5 (ENSODEG00000016335) EMC6 (ENSODEG00000016227) ENSODEG00000016245 CTNS (ENSODEG00000016471) SHPK (ENSODEG00000016191) TRPV1 (ENSODEG00000016421) TRPV3 (ENSODEG00000016429) ASPA (ENSODEG00000017618) Degu MODERN SPECIES 279 THBS4 (ENSODEG00000004087) ENSODEG00000004025 MTX3 (ENSODEG00000004002) TENT2 (ENSODEG00000003946) HOMER1 (ENSODEG00000003750) ENSODEG00000003653 ##22 JMY (ENSODEG00000003622) BHMT (ENSODEG00000003547) BHMT2 (ENSODEG00000003503) DMGDH (ENSODEG00000003394) ARSB (ENSODEG00000003302) ENSODEG00000003273 LHFPL2 (ENSODEG00000003251) SCAMP1 (ENSODEG00000001895) ENSODEG00000001866 ENSODEG00000001855 AP3B1 (ENSODEG00000001757) ENSODEG00000001711 ENSODEG00000018773 ENSODEG00000018710 ENSODEG00000001698 Degu DUPLICATION Degu MODERN SPECIES 57 ENSODEG00000009779 ABI2 (ENSODEG00000009457) ENSODEG00000013477 CTLA4 (ENSODEG00000009327) ENSODEG00000010295 ICOS (ENSODEG00000011327) ENSODEG00000009131 ENSODEG00000010021 PARD3B (ENSODEG00000012523) ENSODEG00000010455 INO80D (ENSODEG00000009769) ENSODEG00000019630 ENSODEG00000008842 ENSODEG00000009030 ENSODEG00000008974 ENSODEG00000010229 ##22 ENSODEG00000019757 ADAM23 (ENSODEG00000011161) DYTN (ENSODEG00000009029) MDH1B (ENSODEG00000009494) FASTKD2 (ENSODEG00000009880) KLF7 (ENSODEG00000010345) ENSODEG00000009956 ENSODEG00000009302 CREB1 (ENSODEG00000010264) METTL21A (ENSODEG00000009859) ENSODEG00000009393 FZD5 (ENSODEG00000019794) PLEKHM3 (ENSODEG00000010028) ENSODEG00000019703 ENSODEG00000019682 Degu MODERN SPECIES 85 ENSODEG00000020288 HACD4 (ENSODEG00000014342) ENSODEG00000020253 FOCAD (ENSODEG00000015002) ENSODEG00000014558 MLLT3 (ENSODEG00000016615) ENSODEG00000015587 ##22 SLC24A2 (ENSODEG00000016346) ACER2 (ENSODEG00000014450) ENSODEG00000014595 ENSODEG00000020327 DENND4C (ENSODEG00000014636) PLIN2 (ENSODEG00000014348) HAUS6 (ENSODEG00000014005) ENSODEG00000020152 RRAGA (ENSODEG00000020270) ENSODEG00000020135 ENSODEG00000015675 ENSODEG00000014643 ADAMTSL1 (ENSODEG00000014029) SH3GL2 (ENSODEG00000014695) CNTLN (ENSODEG00000014534) Degu MODERN SPECIES 153 ENSODEG00000019798 ENSODEG00000019307 QKI (ENSODEG00000007408) PACRG (ENSODEG00000009517) PRKN (ENSODEG00000006701) AGPAT4 (ENSODEG00000007571) ENSODEG00000006672 ENSODEG00000006392 ENSODEG00000019262 ENSODEG00000006455 ENSODEG00000009894 SLC22A3 (ENSODEG00000006460) ENSODEG00000006583 ENSODEG00000007010 ##22 SLC22A2 (ENSODEG00000007315) SLC22A1 (ENSODEG00000007862) ENSODEG00000019312 IGF2R (ENSODEG00000007106) ENSODEG00000019599 MAS1 (ENSODEG00000019418) ENSODEG00000019381 PNLDC1 (ENSODEG00000008047) ENSODEG00000019385 ENSODEG00000007318 ENSODEG00000007990 ENSODEG00000008372 ACAT2 (ENSODEG00000008431) ENSODEG00000008023 ENSODEG00000019351 Long-tailed chinchilla MODERN SPECIES 164 ENSCLAG00000007700 ENSCLAG00000006700 NBEAL1 (ENSCLAG00000005102) CYP20A1 (ENSCLAG00000004163) ENSCLAG00000006025 ENSCLAG00000004760 ABI2 (ENSCLAG00000004021) ENSCLAG00000003175 CD28 (ENSCLAG00000004670) CTLA4 (ENSCLAG00000004042) ICOS (ENSCLAG00000003964) PARD3B (ENSCLAG00000010240) NRP2 (ENSCLAG00000009120) INO80D (ENSCLAG00000006191) NDUFS1 (ENSCLAG00000009634) EEF1B2 (ENSCLAG00000009181) ##22 CMKLR2 (ENSCLAG00000008973) ENSCLAG00000008490 ATXN3L (ENSCLAG00000005825) ADAM23 (ENSCLAG00000004674) DYTN (ENSCLAG00000003705) MDH1B (ENSCLAG00000003385) FASTKD2 (ENSCLAG00000007036) KLF7 (ENSCLAG00000006083) CREB1 (ENSCLAG00000005853) METTL21A (ENSCLAG00000005572) ENSCLAG00000005432 ENSCLAG00000004502 FZD5 (ENSCLAG00000008821) PLEKHM3 (ENSCLAG00000010825) CRYGC (ENSCLAG00000010342) Naked mole-rat female MODERN SPECIES 17 NBEAL1 (ENSHGLG00000004471) CYP20A1 (ENSHGLG00000050312) ABI2 (ENSHGLG00000007481) ENSHGLG00000005031 CD28 (ENSHGLG00000037192) CTLA4 (ENSHGLG00000009115) ICOS (ENSHGLG00000008777) ENSHGLG00000043313 ENSHGLG00000016877 ENSHGLG00000048100 PARD3B (ENSHGLG00000004982) NRP2 (ENSHGLG00000010562) ENSHGLG00000049876 INO80D (ENSHGLG00000018537) NDUFS1 (ENSHGLG00000015179) EEF1B2 (ENSHGLG00000015147) ##22 ENSHGLG00000045433 CMKLR2 (ENSHGLG00000046982) ENSHGLG00000044712 ADAM23 (ENSHGLG00000006393) FAM237A (ENSHGLG00000030355) ENSHGLG00000005368 MDH1B (ENSHGLG00000004936) FASTKD2 (ENSHGLG00000004761) ENSHGLG00000045814 KLF7 (ENSHGLG00000044157) ENSHGLG00000017319 ENSHGLG00000047324 ENSHGLG00000011676 ENSHGLG00000010806 ENSHGLG00000007598 Sciuridae ANCESTRAL SPECIES 10 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.b Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 2 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.g ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.b Alpin marmot MODERN SPECIES 8 ICA1L (ENSMMMG00000013064) WDR12 (ENSMMMG00000013110) CARF (ENSMMMG00000013161) NBEAL1 (ENSMMMG00000013229) CYP20A1 (ENSMMMG00000013312) ABI2 (ENSMMMG00000013329) ENSMMMG00000013568 CD28 (ENSMMMG00000013599) CTLA4 (ENSMMMG00000013609) ICOS (ENSMMMG00000013624) PARD3B (ENSMMMG00000013680) ENSMMMG00000013911 NRP2 (ENSMMMG00000013924) INO80D (ENSMMMG00000014555) NDUFS1 (ENSMMMG00000014566) ENSMMMG00000014596 ##22 CMKLR2 (ENSMMMG00000014632) ZDBF2 (ENSMMMG00000014650) ADAM23 (ENSMMMG00000014678) FAM237A (ENSMMMG00000014819) DYTN (ENSMMMG00000014828) ENSMMMG00000014844 MDH1B (ENSMMMG00000014852) FASTKD2 (ENSMMMG00000014857) CPO (ENSMMMG00000014874) KLF7 (ENSMMMG00000014897) CREB1 (ENSMMMG00000014914) METTL21A (ENSMMMG00000015010) CCNYL1 (ENSMMMG00000015025) ENSMMMG00000015050 PLEKHM3 (ENSMMMG00000015063) Marmotini_b ANCESTRAL SPECIES 103 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.g ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000163272.a.b Arctic ground squirrel MODERN SPECIES 141 CYP20A1 (ENSUPAG00010007092) ABI2 (ENSUPAG00010007107) RAPH1 (ENSUPAG00010007232) ENSUPAG00010007347 CD28 (ENSUPAG00010007360) CTLA4 (ENSUPAG00010007371) ICOS (ENSUPAG00010007386) PARD3B (ENSUPAG00010007426) NRP2 (ENSUPAG00010007567) INO80D (ENSUPAG00010007624) NDUFS1 (ENSUPAG00010007661) EEF1B2 (ENSUPAG00010007678) ##22 CMKLR2 (ENSUPAG00010007707) ZDBF2 (ENSUPAG00010007725) ADAM23 (ENSUPAG00010007731) FAM237A (ENSUPAG00010007856) DYTN (ENSUPAG00010007862) MDH1B (ENSUPAG00010007886) FASTKD2 (ENSUPAG00010007916) CPO (ENSUPAG00010007941) KLF7 (ENSUPAG00010007967) CREB1 (ENSUPAG00010007984) METTL21A (ENSUPAG00010008009) CCNYL1 (ENSUPAG00010008021) FZD5 (ENSUPAG00010008046) PLEKHM3 (ENSUPAG00010008049) ENSUPAG00010008065 Squirrel MODERN SPECIES 231 ABI2 (ENSSTOG00000015888) RAPH1 (ENSSTOG00000028594) CD28 (ENSSTOG00000026213) CTLA4 (ENSSTOG00000020540) ICOS (ENSSTOG00000013542) PARD3B (ENSSTOG00000010207) NRP2 (ENSSTOG00000010229) INO80D (ENSSTOG00000028419) NDUFS1 (ENSSTOG00000010255) EEF1B2 (ENSSTOG00000005437) ##22 CMKLR2 (ENSSTOG00000005452) ZDBF2 (ENSSTOG00000001663) ADAM23 (ENSSTOG00000024094) DYTN (ENSSTOG00000019822) MDH1B (ENSSTOG00000003194) FASTKD2 (ENSSTOG00000022821) CPO (ENSSTOG00000013351) KLF7 (ENSSTOG00000011069) CREB1 (ENSSTOG00000016482) METTL21A (ENSSTOG00000016483) ENSSTOG00000021511 CCNYL1 (ENSSTOG00000016484) FZD5 (ENSSTOG00000028314) PLEKHM3 (ENSSTOG00000016489) ENSSTOG00000034608 Marmotini ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.h ##22 Alpin marmot MODERN SPECIES 10 RBBP8 (ENSMMMG00000009957) ENSMMMG00000009948 TMEM241 (ENSMMMG00000009827) RIOK3 (ENSMMMG00000009816) RMC1 (ENSMMMG00000009792) NPC1 (ENSMMMG00000009738) ANKRD29 (ENSMMMG00000009665) ENSMMMG00000009651 ENSMMMG00000009558 TTC39C (ENSMMMG00000009511) ENSMMMG00000009452 OSBPL1A (ENSMMMG00000009196) IMPACT (ENSMMMG00000009173) HRH4 (ENSMMMG00000009142) ZNF521 (ENSMMMG00000009091) ENSMMMG00000009075 ##22 ENSMMMG00000008900 PSMA8 (ENSMMMG00000008885) ENSMMMG00000008879 TAF4B (ENSMMMG00000008851) ENSMMMG00000008841 ENSMMMG00000008830 AQP4 (ENSMMMG00000008817) CHST9 (ENSMMMG00000008809) CDH2 (ENSMMMG00000008743) DSC3 (ENSMMMG00000008685) DSC2 (ENSMMMG00000008624) DSC1 (ENSMMMG00000008573) DSG1 (ENSMMMG00000008551) DSG4 (ENSMMMG00000008531) DSG3 (ENSMMMG00000008516) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 15 FAF2 (ENSSVLG00005006753) RNF44 (ENSSVLG00005006791) CDHR2 (ENSSVLG00005006843) GPRIN1 (ENSSVLG00005006977) SNCB (ENSSVLG00005007009) TSPAN17 (ENSSVLG00005007135) UNC5A (ENSSVLG00005005529) HK3 (ENSSVLG00005005729) UIMC1 (ENSSVLG00005005834) ZNF346 (ENSSVLG00005005938) FGFR4 (ENSSVLG00005006108) NSD1 (ENSSVLG00005006441) RAB24 (ENSSVLG00005006626) ENSSVLG00005006716 MXD3 (ENSSVLG00005006803) ENSSVLG00005006837 ##22 LMAN2 (ENSSVLG00005006857) RGS14 (ENSSVLG00005006889) SLC34A1 (ENSSVLG00005006909) PFN3 (ENSSVLG00005006968) F12 (ENSSVLG00005007006) GRK6 (ENSSVLG00005007142) PRR7 (ENSSVLG00005007318) DBN1 (ENSSVLG00005007346) PDLIM7 (ENSSVLG00005007414) DOK3 (ENSSVLG00005007485) DDX41 (ENSSVLG00005007527) FAM193B (ENSSVLG00005007601) TMED9 (ENSSVLG00005007671) B4GALT7 (ENSSVLG00005007711) ENSSVLG00005007752 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005000554 ENSSVLG00005000579 WDR12 (ENSSVLG00005000598) ENSSVLG00005000686 ENSSVLG00005000784 NBEAL1 (ENSSVLG00005000853) CYP20A1 (ENSSVLG00005000970) ABI2 (ENSSVLG00005001071) CD28 (ENSSVLG00005001473) CTLA4 (ENSSVLG00005001529) ICOS (ENSSVLG00005001570) PARD3B (ENSSVLG00005001789) NRP2 (ENSSVLG00005002141) INO80D (ENSSVLG00005002283) ENSSVLG00005002396 ENSSVLG00005002606 ##22 CMKLR2 (ENSSVLG00005002631) ENSSVLG00005002653 ADAM23 (ENSSVLG00005002721) FAM237A (ENSSVLG00005002854) DYTN (ENSSVLG00005002873) MDH1B (ENSSVLG00005002924) FASTKD2 (ENSSVLG00005002985) CPO (ENSSVLG00005003015) KLF7 (ENSSVLG00005003049) CREB1 (ENSSVLG00005003093) METTL21A (ENSSVLG00005003134) ENSSVLG00005003181 FZD5 (ENSSVLG00005003258) PLEKHM3 (ENSSVLG00005003272) ENSSVLG00005003291 Eurasian red squirrel MODERN SPECIES 11 SLC28A2 (ENSSVLG00005000606) GATM (ENSSVLG00005000654) SPATA5L1 (ENSSVLG00005000694) C15orf48 (ENSSVLG00005000724) SLC30A4 (ENSSVLG00005000746) ENSSVLG00005000768 SQOR (ENSSVLG00005000806) SEMA6D (ENSSVLG00005000952) SLC24A5 (ENSSVLG00005001196) MYEF2 (ENSSVLG00005001267) CTXN2 (ENSSVLG00005001303) SLC12A1 (ENSSVLG00005001381) ENSSVLG00005001505 ENSSVLG00005001592 FBN1 (ENSSVLG00005001645) ENSSVLG00005001781 ##22 ENSSVLG00005001795 CEP152 (ENSSVLG00005001882) SHC4 (ENSSVLG00005002098) ENSSVLG00005002146 SECISBP2L (ENSSVLG00005002173) ENSSVLG00005002244 GALK2 (ENSSVLG00005002344) FGF7 (ENSSVLG00005002472) DTWD1 (ENSSVLG00005002492) ATP8B4 (ENSSVLG00005002514) SLC27A2 (ENSSVLG00005002589) HDC (ENSSVLG00005002669) GABPB1 (ENSSVLG00005002736) USP8 (ENSSVLG00005002839) USP50 (ENSSVLG00005002911) Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005013100 ENSSVLG00005013222 ENSSVLG00005013289 MCTS1 (ENSSVLG00005013371) ENSSVLG00005013703 ENSSVLG00005013800 LAMP2 (ENSSVLG00005013943) ENSSVLG00005014061 ATP1B4 (ENSSVLG00005014140) TMEM255A (ENSSVLG00005014430) ZBTB33 (ENSSVLG00005014593) ENSSVLG00005014617 ENSSVLG00005014664 NKAP (ENSSVLG00005014692) ENSSVLG00005014730 ENSSVLG00005014769 ##22 ENSSVLG00005014815 NDUFA1 (ENSSVLG00005014840) RNF113A (ENSSVLG00005014872) UPF3B (ENSSVLG00005014902) ENSSVLG00005014976 SOWAHD (ENSSVLG00005015012) SEPTIN6 (ENSSVLG00005015053) NKRF (ENSSVLG00005015133) ENSSVLG00005015206 STEEP1 (ENSSVLG00005015463) SLC25A5 (ENSSVLG00005015540) SLC25A43 (ENSSVLG00005015575) ENSSVLG00005015613 PGRMC1 (ENSSVLG00005015662) ENSSVLG00005015710 Primates ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Lemuriformes ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Coquerels sifaka MODERN SPECIES 847 PARD3B (ENSPCOG00000018611) NRP2 (ENSPCOG00000020112) INO80D (ENSPCOG00000024934) ENSPCOG00000018961 EEF1B2 (ENSPCOG00000016289) ##22 ENSPCOG00000013632 ZDBF2 (ENSPCOG00000019226) ADAM23 (ENSPCOG00000023473) FAM237A (ENSPCOG00000018015) DYTN (ENSPCOG00000020018) MDH1B (ENSPCOG00000017083) FASTKD2 (ENSPCOG00000028714) CPO (ENSPCOG00000028646) KLF7 (ENSPCOG00000018231) CREB1 (ENSPCOG00000021255) METTL21A (ENSPCOG00000018442) ENSPCOG00000013286 FZD5 (ENSPCOG00000011393) PLEKHM3 (ENSPCOG00000024736) ENSPCOG00000017843 Greater bamboo lemur MODERN SPECIES 388 CD28 (ENSPSMG00000022341) ENSPSMG00000022328 CTLA4 (ENSPSMG00000022319) ICOS (ENSPSMG00000022309) PARD3B (ENSPSMG00000022181) NRP2 (ENSPSMG00000021719) INO80D (ENSPSMG00000021497) NDUFS1 (ENSPSMG00000021383) EEF1B2 (ENSPSMG00000021215) ##22 CMKLR2 (ENSPSMG00000021198) Mouse lemur MODERN SPECIES 30 ENSMICG00000044580 CARF (ENSMICG00000011943) ENSMICG00000026752 NBEAL1 (ENSMICG00000003736) CYP20A1 (ENSMICG00000010806) ABI2 (ENSMICG00000048062) RAPH1 (ENSMICG00000001085) CD28 (ENSMICG00000044645) CTLA4 (ENSMICG00000032206) ICOS (ENSMICG00000037046) PARD3B (ENSMICG00000009358) NRP2 (ENSMICG00000009376) ENSMICG00000044290 INO80D (ENSMICG00000010590) NDUFS1 (ENSMICG00000010601) EEF1B2 (ENSMICG00000047922) ##22 ZDBF2 (ENSMICG00000044925) ADAM23 (ENSMICG00000009477) FAM237A (ENSMICG00000044768) DYTN (ENSMICG00000027944) MDH1B (ENSMICG00000009487) FASTKD2 (ENSMICG00000026515) CPO (ENSMICG00000015370) KLF7 (ENSMICG00000037405) CREB1 (ENSMICG00000009731) METTL21A (ENSMICG00000009739) ENSMICG00000009744 FZD5 (ENSMICG00000044967) PLEKHM3 (ENSMICG00000009771) ENSMICG00000045926 CRYGD (ENSMICG00000043795) Bushbaby MODERN SPECIES 128 FAM117B (ENSOGAG00000001497) ICA1L (ENSOGAG00000001500) WDR12 (ENSOGAG00000006573) CARF (ENSOGAG00000032187) NBEAL1 (ENSOGAG00000015089) CYP20A1 (ENSOGAG00000015164) ENSOGAG00000033059 ABI2 (ENSOGAG00000011602) RAPH1 (ENSOGAG00000015099) CD28 (ENSOGAG00000012567) CTLA4 (ENSOGAG00000002578) PARD3B (ENSOGAG00000007396) NRP2 (ENSOGAG00000007405) INO80D (ENSOGAG00000005756) NDUFS1 (ENSOGAG00000011226) EEF1B2 (ENSOGAG00000011229) ##22 CMKLR2 (ENSOGAG00000011232) ENSOGAG00000031172 ZDBF2 (ENSOGAG00000016996) ENSOGAG00000031644 ADAM23 (ENSOGAG00000016997) DYTN (ENSOGAG00000027434) MDH1B (ENSOGAG00000017006) FASTKD2 (ENSOGAG00000017008) CPO (ENSOGAG00000017012) KLF7 (ENSOGAG00000017014) CREB1 (ENSOGAG00000007121) METTL21A (ENSOGAG00000007128) ENSOGAG00000003673 FZD5 (ENSOGAG00000003677) PLEKHM3 (ENSOGAG00000003678) Haplorrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Tarsier DUPLICATION Tarsier DUPLICATION Tarsier MODERN SPECIES 4878 NRP2 (ENSTSYG00000033080) INO80D (ENSTSYG00000030622) NDUFS1 (ENSTSYG00000014545) EEF1B2 (ENSTSYG00000014573) ##22 ZDBF2 (ENSTSYG00000035582) Tarsier MODERN SPECIES 1433 ENSTSYG00000035001 ##22 Tarsier MODERN SPECIES 7185 PKP2 (ENSTSYG00000011724) YARS2 (ENSTSYG00000013725) DNM1L (ENSTSYG00000013712) FGD4 (ENSTSYG00000005033) BICD1 (ENSTSYG00000000268) ENSTSYG00000032965 ##22 ENSTSYG00000032929 Simiiformes ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Olive baboon MODERN SPECIES 19 TMEM119 (ENSPANG00000008243) ISCU (ENSPANG00000026468) SART3 (ENSPANG00000024915) FICD (ENSPANG00000025435) CMKLR1 (ENSPANG00000012188) WSCD2 (ENSPANG00000016135) ENSPANG00000046253 ASCL4 (ENSPANG00000043496) PRDM4 (ENSPANG00000022084) PWP1 (ENSPANG00000004645) ABTB3 (ENSPANG00000005795) CRY1 (ENSPANG00000026255) MTERF2 (ENSPANG00000006958) ENSPANG00000038560 ENSPANG00000048626 ENSPANG00000009390 ##22 RIC8B (ENSPANG00000003388) RFX4 (ENSPANG00000006357) POLR3B (ENSPANG00000012252) TCP11L2 (ENSPANG00000041306) CKAP4 (ENSPANG00000026469) NUAK1 (ENSPANG00000051069) ENSPANG00000041805 C12orf75 (ENSPANG00000033836) APPL2 (ENSPANG00000012253) WASHC4 (ENSPANG00000006617) ALDH1L2 (ENSPANG00000018236) NOPCHAP1 (ENSPANG00000012189) SLC41A2 (ENSPANG00000004472) CHST11 (ENSPANG00000012280) TXNRD1 (ENSPANG00000012060) Macaca ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Macaca_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.h ##22 Crab-eating macaque MODERN SPECIES 2 CORO1C (ENSMFAG00000044006) ISCU (ENSMFAG00000045386) SART3 (ENSMFAG00000039887) FICD (ENSMFAG00000037681) ENSMFAG00000054405 CMKLR1 (ENSMFAG00000014872) WSCD2 (ENSMFAG00000042790) ENSMFAG00000048745 PRDM4 (ENSMFAG00000041862) PWP1 (ENSMFAG00000036367) ABTB3 (ENSMFAG00000030643) ENSMFAG00000047603 CRY1 (ENSMFAG00000041111) MTERF2 (ENSMFAG00000029443) ENSMFAG00000041360 ENSMFAG00000003979 ##22 RIC8B (ENSMFAG00000002768) ENSMFAG00000062359 POLR3B (ENSMFAG00000038425) TCP11L2 (ENSMFAG00000042033) CKAP4 (ENSMFAG00000036560) ENSMFAG00000065790 ##14 NUAK1 (ENSMFAG00000000816) KLK13 (ENSMFAG00000042780) ENSMFAG00000049727 APPL2 (ENSMFAG00000043698) WASHC4 (ENSMFAG00000044577) ALDH1L2 (ENSMFAG00000040964) NOPCHAP1 (ENSMFAG00000039029) SLC41A2 (ENSMFAG00000045731) ENSMFAG00000056779 Vervet Monkey MODERN SPECIES 1 ICA1L (ENSCSAG00000010466) ENSCSAG00000010442 CARF (ENSCSAG00000010380) NBEAL1 (ENSCSAG00000010364) CYP20A1 (ENSCSAG00000010341) ABI2 (ENSCSAG00000010327) RAPH1 (ENSCSAG00000010318) CD28 (ENSCSAG00000010308) ENSCSAG00000010293 CTLA4 (ENSCSAG00000010288) ICOS (ENSCSAG00000010281) PARD3B (ENSCSAG00000010270) NRP2 (ENSCSAG00000010258) INO80D (ENSCSAG00000010251) NDUFS1 (ENSCSAG00000010247) ENSCSAG00000010238 ##22 CMKLR2 (ENSCSAG00000018769) ZDBF2 (ENSCSAG00000010233) ENSCSAG00000010220 ADAM23 (ENSCSAG00000010198) DYTN (ENSCSAG00000010181) MDH1B (ENSCSAG00000010163) FASTKD2 (ENSCSAG00000010158) CPO (ENSCSAG00000010143) KLF7 (ENSCSAG00000010117) CREB1 (ENSCSAG00000010111) METTL21A (ENSCSAG00000010107) CCNYL1 (ENSCSAG00000010093) FZD5 (ENSCSAG00000018771) PLEKHM3 (ENSCSAG00000010071) CRYGD (ENSCSAG00000010066) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Eulipotyphla ANCESTRAL SPECIES 2005 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 Common shrew MODERN SPECIES 1157 NDUFS1 (ENSSARG00000001498) EEF1B2 (ENSSARG00000001524) ##22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00940000153064.b.d ENSGT01050000244818.s.a ENSGT01090000260046 ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Chiroptera ANCESTRAL SPECIES 11 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 Megabat MODERN SPECIES 7224 NDUFS1 (ENSPVAG00000017332) EEF1B2 (ENSPVAG00000017334) ##22 CMKLR2 (ENSPVAG00000017335) Microchiroptera ANCESTRAL SPECIES 15 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 Greater horseshoe bat MODERN SPECIES 26 FAM117B (ENSRFEG00010014554) ICA1L (ENSRFEG00010014466) WDR12 (ENSRFEG00010014405) CARF (ENSRFEG00010013855) NBEAL1 (ENSRFEG00010013724) CYP20A1 (ENSRFEG00010013600) ABI2 (ENSRFEG00010013372) RAPH1 (ENSRFEG00010013239) CD28 (ENSRFEG00010013138) ENSRFEG00010013108 ICOS (ENSRFEG00010013045) PARD3B (ENSRFEG00010012777) NRP2 (ENSRFEG00010012560) INO80D (ENSRFEG00010012508) NDUFS1 (ENSRFEG00010011973) EEF1B2 (ENSRFEG00010011873) ##22 CMKLR2 (ENSRFEG00010011856) ENSRFEG00010011751 ADAM23 (ENSRFEG00010010998) FAM237A (ENSRFEG00010010918) DYTN (ENSRFEG00010010740) MDH1B (ENSRFEG00010010537) FASTKD2 (ENSRFEG00010010475) CPO (ENSRFEG00010010427) KLF7 (ENSRFEG00010010310) CREB1 (ENSRFEG00010020193) ENSRFEG00010020167 METTL21A (ENSRFEG00010020119) CCNYL1 (ENSRFEG00010020079) FZD5 (ENSRFEG00010020064) PLEKHM3 (ENSRFEG00010020009) Microbat DUPLICATION Microbat MODERN SPECIES 1023 WNT11 (ENSMLUG00000016319) ENSMLUG00000000564 EMSY (ENSMLUG00000012303) LRRC32 (ENSMLUG00000010094) ENSMLUG00000001171 TSKU (ENSMLUG00000001174) CAPN5 (ENSMLUG00000001183) MYO7A (ENSMLUG00000016621) GDPD4 (ENSMLUG00000016657) PAK1 (ENSMLUG00000013311) AQP11 (ENSMLUG00000009739) CLNS1A (ENSMLUG00000024623) RSF1 (ENSMLUG00000005657) ENSMLUG00000029974 ##22 AAMDC (ENSMLUG00000005674) ENSMLUG00000025569 INTS4 (ENSMLUG00000005683) KCTD14 (ENSMLUG00000014611) THRSP (ENSMLUG00000014613) ENSMLUG00000014617 ALG8 (ENSMLUG00000014622) KCTD21 (ENSMLUG00000014632) USP35 (ENSMLUG00000015951) GAB2 (ENSMLUG00000015964) NARS2 (ENSMLUG00000030064) TENM4 (ENSMLUG00000011352) ENSMLUG00000023900 ENSMLUG00000024031 ENSMLUG00000027477 Microbat MODERN SPECIES 940 CYP20A1 (ENSMLUG00000014996) ABI2 (ENSMLUG00000008117) RAPH1 (ENSMLUG00000008162) CD28 (ENSMLUG00000004329) CTLA4 (ENSMLUG00000009619) ICOS (ENSMLUG00000009627) ENSMLUG00000024002 ENSMLUG00000025717 ENSMLUG00000013841 ENSMLUG00000026514 ENSMLUG00000022709 ENSMLUG00000028553 NRP2 (ENSMLUG00000013862) INO80D (ENSMLUG00000007714) NDUFS1 (ENSMLUG00000016594) ENSMLUG00000016602 ##22 CMKLR2 (ENSMLUG00000016607) ENSMLUG00000023597 ZDBF2 (ENSMLUG00000014265) ADAM23 (ENSMLUG00000009364) FAM237A (ENSMLUG00000030140) DYTN (ENSMLUG00000028179) MDH1B (ENSMLUG00000009390) FASTKD2 (ENSMLUG00000009411) CPO (ENSMLUG00000009428) KLF7 (ENSMLUG00000009436) CREB1 (ENSMLUG00000016119) METTL21A (ENSMLUG00000015747) ENSMLUG00000016122 PLEKHM3 (ENSMLUG00000011905) ENSMLUG00000028817 Carnivora ANCESTRAL SPECIES 17 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00940000157820.a.a ENSGT00530000063873.A ENSGT01090000260046 ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Felidae DUPLICATION Felidae ANCESTRAL SPECIES 15 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00940000157820.a.a ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.o ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.ab Panthera ANCESTRAL SPECIES 9 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00520000059926.a.b ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.o ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.ab Tiger MODERN SPECIES 313 WDR12 (ENSPTIG00000013035) CARF (ENSPTIG00000012946) ENSPTIG00000008218 NBEAL1 (ENSPTIG00000012887) CYP20A1 (ENSPTIG00000012850) ABI2 (ENSPTIG00000012734) ENSPTIG00000012473 CD28 (ENSPTIG00000012428) CTLA4 (ENSPTIG00000012408) ICOS (ENSPTIG00000012385) ENSPTIG00000008211 PARD3B (ENSPTIG00000012297) NRP2 (ENSPTIG00000012139) INO80D (ENSPTIG00000012089) NDUFS1 (ENSPTIG00000012021) ENSPTIG00000011994 ##22 CMKLR2 (ENSPTIG00000008203) ADAM23 (ENSPTIG00000011931) FAM237A (ENSPTIG00000011920) DYTN (ENSPTIG00000011914) MDH1B (ENSPTIG00000011902) FASTKD2 (ENSPTIG00000011891) CPO (ENSPTIG00000011884) KLF7 (ENSPTIG00000011869) CREB1 (ENSPTIG00000011848) METTL21A (ENSPTIG00000011823) ENSPTIG00000011797 PLEKHM3 (ENSPTIG00000011775) CRYGD (ENSPTIG00000011767) CRYGC (ENSPTIG00000011760) CRYGB (ENSPTIG00000011753) Panthera_a ANCESTRAL SPECIES 6 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00520000059926.a.b ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.o ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.ab leopard MODERN SPECIES 12 NBEAL1 (ENSPPRG00000024650) CYP20A1 (ENSPPRG00000024582) ABI2 (ENSPPRG00000024330) ENSPPRG00000023758 CD28 (ENSPPRG00000023378) CTLA4 (ENSPPRG00000023337) ICOS (ENSPPRG00000023149) ENSPPRG00000020852 PARD3B (ENSPPRG00000001193) NRP2 (ENSPPRG00000001684) INO80D (ENSPPRG00000001843) NDUFS1 (ENSPPRG00000003837) ENSPPRG00000004175 ##22 CMKLR2 (ENSPPRG00000020893) ADAM23 (ENSPPRG00000004864) FAM237A (ENSPPRG00000005451) DYTN (ENSPPRG00000005491) MDH1B (ENSPPRG00000005932) FASTKD2 (ENSPPRG00000006075) CPO (ENSPPRG00000006106) KLF7 (ENSPPRG00000006377) CREB1 (ENSPPRG00000006712) METTL21A (ENSPPRG00000006796) ENSPPRG00000007043 PLEKHM3 (ENSPPRG00000007268) ENSPPRG00000007573 CRYGD (ENSPPRG00000007631) CRYGC (ENSPPRG00000007729) lion MODERN SPECIES 8 WDR12 (ENSPLOG00000011514) CARF (ENSPLOG00000011224) NBEAL1 (ENSPLOG00000010825) CYP20A1 (ENSPLOG00000010756) ABI2 (ENSPLOG00000010377) ENSPLOG00000010151 CD28 (ENSPLOG00000010049) CTLA4 (ENSPLOG00000010005) ICOS (ENSPLOG00000009959) ENSPLOG00000009936 PARD3B (ENSPLOG00000008780) NRP2 (ENSPLOG00000008415) INO80D (ENSPLOG00000008354) NDUFS1 (ENSPLOG00000008138) ENSPLOG00000008015 ENSPLOG00000007981 ##22 CMKLR2 (ENSPLOG00000007963) ZDBF2 (ENSPLOG00000007898) ENSPLOG00000007877 ADAM23 (ENSPLOG00000007574) FAM237A (ENSPLOG00000007523) DYTN (ENSPLOG00000007459) MDH1B (ENSPLOG00000007375) FASTKD2 (ENSPLOG00000007345) CPO (ENSPLOG00000007242) KLF7 (ENSPLOG00000007130) CREB1 (ENSPLOG00000007090) METTL21A (ENSPLOG00000007061) ENSPLOG00000006998 FZD5 (ENSPLOG00000006965) PLEKHM3 (ENSPLOG00000006915) Cat MODERN SPECIES 239 CARF (ENSFCAG00000046458) NBEAL1 (ENSFCAG00000025997) ENSFCAG00000027770 ENSFCAG00000048141 CYP20A1 (ENSFCAG00000022927) ABI2 (ENSFCAG00000012982) RAPH1 (ENSFCAG00000019050) ENSFCAG00000034107 CD28 (ENSFCAG00000014271) CTLA4 (ENSFCAG00000014272) ICOS (ENSFCAG00000038001) PARD3B (ENSFCAG00000025870) NRP2 (ENSFCAG00000000423) INO80D (ENSFCAG00000022035) NDUFS1 (ENSFCAG00000023344) EEF1B2 (ENSFCAG00000010239) ##22 CMKLR2 (ENSFCAG00000028762) ZDBF2 (ENSFCAG00000041779) ADAM23 (ENSFCAG00000018551) DYTN (ENSFCAG00000024422) MDH1B (ENSFCAG00000015372) FASTKD2 (ENSFCAG00000015373) CPO (ENSFCAG00000002513) KLF7 (ENSFCAG00000002514) CREB1 (ENSFCAG00000008220) METTL21A (ENSFCAG00000035900) CCNYL1 (ENSFCAG00000028003) ENSFCAG00000039577 FZD5 (ENSFCAG00000037566) PLEKHM3 (ENSFCAG00000002716) ENSFCAG00000046445 Felidae ANCESTRAL SPECIES 65 ENSGT00950000183014.f.a.h.p ##22 ENSGT00930000152728 Panthera ANCESTRAL SPECIES 109 ENSGT00950000183014.f.a.h.p ##22 ENSGT00930000152728.c Tiger MODERN SPECIES 155 ENSPTIG00000008461 CYP3A132 (ENSPTIG00000009616) CYP3A131 (ENSPTIG00000011625) ENSPTIG00000011815 ##22 ENSPTIG00000005985 ZSCAN25 (ENSPTIG00000012424) TMEM225B (ENSPTIG00000013612) ZNF655 (ENSPTIG00000015445) FAM200A (ENSPTIG00000006096) ZKSCAN5 (ENSPTIG00000018483) ZNF394 (ENSPTIG00000020093) ZNF789 (ENSPTIG00000001790) ENSPTIG00000004326 CPSF4 (ENSPTIG00000005604) PTCD1 (ENSPTIG00000010617) BUD31 (ENSPTIG00000011324) PDAP1 (ENSPTIG00000012964) ARPC1B (ENSPTIG00000014065) ARPC1A (ENSPTIG00000015204) Panthera_a ANCESTRAL SPECIES 27 ENSGT00940000159929.e ENSGT01050000244824.C ENSGT00950000183073.a.a.b.o ENSGT00940000153104.e.b.b ENSGT00940000161607 ENSGT00940000161592 ENSGT01100000263517.b.d.m.b.a.a ENSGT01090000260005.a.a.a.a ENSGT00940000163330 ENSGT01090000260018.B.b ENSGT00950000182958.a.b.b.j.j ENSGT00950000182958.a.b.b.j.i.a.h ENSGT00950000182958.a.b.b.j.i.a.g ENSGT00940000165702 ENSGT00930000152728.c ENSGT00950000183014.f.a.h.p ##22 ENSGT00940000162113 ENSGT00510000055200 ENSGT00760000119441 ENSGT00940000164024 ENSGT00940000162299 ENSGT00940000162347 ENSGT00940000163495 ENSGT00510000046986.v.b.a.c ENSGT00940000155520 ENSGT00940000153974.A ENSGT00390000014300 ENSGT00390000018509.a ENSGT00950000183183.b.b ENSGT00950000183183.b.a ENSGT00940000160705.C.b leopard MODERN SPECIES 91 ENSPPRG00000002694 MCM7 (ENSPPRG00000005906) COPS6 (ENSPPRG00000006726) ZNF3 (ENSPPRG00000007170) ZSCAN21 (ENSPPRG00000007444) ZKSCAN1 (ENSPPRG00000008519) AZGP1 (ENSPPRG00000008844) GJC3 (ENSPPRG00000019800) TRIM4 (ENSPPRG00000009044) OR2AE1 (ENSPPRG00000019851) ENSPPRG00000010396 CYP3A132 (ENSPPRG00000013886) CYP3A131 (ENSPPRG00000014793) ENSPPRG00000020116 ENSPPRG00000020127 ENSPPRG00000018011 ##22 ZSCAN25 (ENSPPRG00000020661) TMEM225B (ENSPPRG00000021822) ZNF655 (ENSPPRG00000023556) FAM200A (ENSPPRG00000020418) ZKSCAN5 (ENSPPRG00000000685) ZNF394 (ENSPPRG00000000948) ZNF789 (ENSPPRG00000001332) ENSPPRG00000001557 CPSF4 (ENSPPRG00000003134) PTCD1 (ENSPPRG00000003478) BUD31 (ENSPPRG00000004354) PDAP1 (ENSPPRG00000007263) ARPC1B (ENSPPRG00000007519) ARPC1A (ENSPPRG00000008068) ENSPPRG00000010473 lion MODERN SPECIES 16 TAF6 (ENSPLOG00000020624) AP4M1 (ENSPLOG00000020797) MCM7 (ENSPLOG00000020913) COPS6 (ENSPLOG00000021153) ZNF3 (ENSPLOG00000021226) ZSCAN21 (ENSPLOG00000021246) ZKSCAN1 (ENSPLOG00000021273) AZGP1 (ENSPLOG00000021332) GJC3 (ENSPLOG00000021380) TRIM4 (ENSPLOG00000021398) OR2AE1 (ENSPLOG00000021431) ENSPLOG00000021444 ENSPLOG00000021498 CYP3A131 (ENSPLOG00000021657) ENSPLOG00000021785 ENSPLOG00000021805 ##22 ZSCAN25 (ENSPLOG00000021838) ENSPLOG00000021878 ZNF655 (ENSPLOG00000021930) FAM200A (ENSPLOG00000021967) ZKSCAN5 (ENSPLOG00000021985) ZNF394 (ENSPLOG00000022000) ZNF789 (ENSPLOG00000022019) ENSPLOG00000022043 CPSF4 (ENSPLOG00000022084) PTCD1 (ENSPLOG00000022137) BUD31 (ENSPLOG00000022188) PDAP1 (ENSPLOG00000022211) ARPC1B (ENSPLOG00000022242) ARPC1A (ENSPLOG00000022304) ENSPLOG00000022335 Caniformia ANCESTRAL SPECIES 14 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00940000157820.a.a ENSGT00530000063873.A ENSGT01090000260046 ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Canidae DUPLICATION Canidae ANCESTRAL SPECIES 20 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT01090000260046.e.a.a.b ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.q ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Canis_lupus ANCESTRAL SPECIES 32 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000154694.l.b.b.a.a.b ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.q ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.ib Dingo MODERN SPECIES 398 CARF (ENSCAFG00020001932) ENSCAFG00020001912 NBEAL1 (ENSCAFG00020001831) CYP20A1 (ENSCAFG00020001812) ENSCAFG00020001801 ENSCAFG00020001784 ABI2 (ENSCAFG00020001752) RAPH1 (ENSCAFG00020001630) CD28 (ENSCAFG00020001531) CTLA4 (ENSCAFG00020001506) ICOS (ENSCAFG00020001489) PARD3B (ENSCAFG00020001089) NRP2 (ENSCAFG00020000746) INO80D (ENSCAFG00020000661) NDUFS1 (ENSCAFG00020000642) EEF1B2 (ENSCAFG00020000617) ##22 CMKLR2 (ENSCAFG00020000614) ZDBF2 (ENSCAFG00020000545) ADAM23 (ENSCAFG00020000240) FAM237A (ENSCAFG00020000156) DYTN (ENSCAFG00020027434) MDH1B (ENSCAFG00020027429) FASTKD2 (ENSCAFG00020027426) CPO (ENSCAFG00020027425) KLF7 (ENSCAFG00020027423) CREB1 (ENSCAFG00020027420) METTL21A (ENSCAFG00020027418) ENSCAFG00020027415 FZD5 (ENSCAFG00020027413) PLEKHM3 (ENSCAFG00020027411) ENSCAFG00020027409 Dog MODERN SPECIES 30 NBEAL1 (ENSCAFG00845016248) CYP20A1 (ENSCAFG00845016438) ENSCAFG00845016541 ABI2 (ENSCAFG00845016661) ENSCAFG00845016782 ENSCAFG00845016818 RAPH1 (ENSCAFG00845017225) ENSCAFG00845017896 CD28 (ENSCAFG00845018097) CTLA4 (ENSCAFG00845018252) ICOS (ENSCAFG00845018403) PARD3B (ENSCAFG00845018916) NRP2 (ENSCAFG00845019968) INO80D (ENSCAFG00845020375) NDUFS1 (ENSCAFG00845020511) EEF1B2 (ENSCAFG00845020822) ##22 GPR1 (ENSCAFG00845020895) ZDBF2 (ENSCAFG00845020911) ADAM23 (ENSCAFG00845021040) FAM237A (ENSCAFG00845021430) DYTN (ENSCAFG00845021457) MDH1B (ENSCAFG00845021551) FASTKD2 (ENSCAFG00845021685) CPO (ENSCAFG00845021788) KLF7 (ENSCAFG00845021900) CREB1 (ENSCAFG00845022020) METTL21A (ENSCAFG00845022171) CCNYL1 (ENSCAFG00845022326) FZD5 (ENSCAFG00845022521) PLEKHM3 (ENSCAFG00845022580) ENSCAFG00845022685 Red fox MODERN SPECIES 41 ENSVVUG00000017885 NBEAL1 (ENSVVUG00000017646) CYP20A1 (ENSVVUG00000017336) ENSVVUG00000017318 ENSVVUG00000017315 ABI2 (ENSVVUG00000017312) RAPH1 (ENSVVUG00000017063) CD28 (ENSVVUG00000017013) ENSVVUG00000017012 CTLA4 (ENSVVUG00000017009) ICOS (ENSVVUG00000017004) PARD3B (ENSVVUG00000016975) NRP2 (ENSVVUG00000016946) INO80D (ENSVVUG00000016931) NDUFS1 (ENSVVUG00000016918) EEF1B2 (ENSVVUG00000016896) ##22 GPR1 (ENSVVUG00000016890) ZDBF2 (ENSVVUG00000016880) Canidae ANCESTRAL SPECIES 55 ENSGT00820000127055.b ENSGT00950000182843.a.b ENSGT00940000158664 ENSGT00550000074798.a.a ENSGT00940000167500 ENSGT00940000159978 ENSGT00950000183203.d.h ENSGT00940000153654.v ENSGT00390000002575 ENSGT00390000002259 ENSGT00940000160018 ENSGT00390000004807 ENSGT00940000153189.A ENSGT00940000161453 ENSGT00940000156771 ENSGT00950000183014.f.a.h.r ##22 ENSGT00940000158884 ENSGT00940000156516 ENSGT01030000234531.A.a ENSGT00940000161017 ENSGT01060000249414 ENSGT00940000153307.c.a.m.a.e.a ENSGT00940000163200 ENSGT00940000161808 ENSGT00390000015147 ENSGT00940000161345 ENSGT00940000156340.a ENSGT00440000038585 ENSGT00530000063156.a.a.b ENSGT00940000161061.b.k ENSGT00940000155608 Canis_lupus ANCESTRAL SPECIES 43 ENSGT00940000160448 ENSGT00820000127055.b ENSGT00950000182843.a.b ENSGT00940000158664 ENSGT00550000074798.a.a ENSGT00940000159978 ENSGT00950000183203.d.h ENSGT00940000153654.v ENSGT00390000002575 ENSGT00390000002259 ENSGT00940000160018 ENSGT00390000004807 ENSGT00940000153189.A ENSGT00940000161453 ENSGT00940000156771 ENSGT00950000183014.f.a.h.r ##22 ENSGT00940000158884 ENSGT00940000156516 ENSGT01030000234531.A.a.db ENSGT01090000260046.e.b.b.a.b.a.a.b.b.b.b.b.a.a.b.a.a.a.b.b.b ENSGT00390000017639 ENSGT00940000156675 ENSGT00390000008276.s ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00940000158306 ENSGT00390000018409 ENSGT00390000009613.a Dog MODERN SPECIES 18 CRKL (ENSCAFG00845024825) SNAP29 (ENSCAFG00845024886) PI4KA (ENSCAFG00845025057) SERPIND1 (ENSCAFG00845025426) ENSCAFG00845025517 HIC2 (ENSCAFG00845025675) ENSCAFG00845025717 UBE2L3 (ENSCAFG00845025758) YDJC (ENSCAFG00845025856) ENSCAFG00845025936 SDF2L1 (ENSCAFG00845025979) ENSCAFG00845026045 PPIL2 (ENSCAFG00845026106) YPEL1 (ENSCAFG00845026237) MAPK1 (ENSCAFG00845026389) ENSCAFG00845026492 ##22 PPM1F (ENSCAFG00845026555) TOP3B (ENSCAFG00845026653) ENSCAFG00845026784 ENSCAFG00845026842 ENSCAFG00845027154 ENSCAFG00845027323 PCDH15 (ENSCAFG00845027622) ENSCAFG00845028393 DKK1 (ENSCAFG00845028436) PRKG1 (ENSCAFG00845028591) CSTF2T (ENSCAFG00845028745) A1CF (ENSCAFG00845028778) ASAH2 (ENSCAFG00845028926) SGMS1 (ENSCAFG00845029103) ENSCAFG00845029171 Red fox MODERN SPECIES 174 CRKL (ENSVVUG00000021350) SNAP29 (ENSVVUG00000021344) SERPIND1 (ENSVVUG00000021340) PI4KA (ENSVVUG00000020743) ENSVVUG00000020693 HIC2 (ENSVVUG00000020688) ENSVVUG00000020684 ENSVVUG00000020676 YDJC (ENSVVUG00000020668) ENSVVUG00000020664 SDF2L1 (ENSVVUG00000020657) ENSVVUG00000020645 PPIL2 (ENSVVUG00000020432) YPEL1 (ENSVVUG00000020414) MAPK1 (ENSVVUG00000020374) ENSVVUG00000020373 ##22 PPM1F (ENSVVUG00000020371) TOP3B (ENSVVUG00000019530) VPREB1 (ENSVVUG00000019499) ENSVVUG00000019497 ZNF70 (ENSVVUG00000019496) VPREB3 (ENSVVUG00000019493) CUNH22orf15 (ENSVVUG00000019492) MMP11 (ENSVVUG00000019474) SMARCB1 (ENSVVUG00000019470) ENSVVUG00000019469 ENSVVUG00000019467 SLC2A11 (ENSVVUG00000019454) MIF (ENSVVUG00000019447) ENSVVUG00000019441 ENSVVUG00000019439 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00940000157820.a.a ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Mustelinae ANCESTRAL SPECIES 44 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b American mink MODERN SPECIES 40 ICA1L (ENSNVIG00000007376) WDR12 (ENSNVIG00000007326) F6SXV3 (ENSNVIG00000007220) NBEAL1 (ENSNVIG00000007140) CYP20A1 (ENSNVIG00000007093) ABI2 (ENSNVIG00000006920) RAPH1 (ENSNVIG00000006475) ENSNVIG00000006462 CD28 (ENSNVIG00000006426) CTLA4 (ENSNVIG00000006392) ICOS (ENSNVIG00000006380) PARD3B (ENSNVIG00000005889) NRP2 (ENSNVIG00000005651) INO80D (ENSNVIG00000005634) NDUFS1 (ENSNVIG00000005404) EEF1B2 (ENSNVIG00000005362) ##22 GPR1 (ENSNVIG00000005355) ZDBF2 (ENSNVIG00000005326) ADAM23 (ENSNVIG00000005209) FAM237A (ENSNVIG00000005198) DYTN (ENSNVIG00000005190) MDH1B (ENSNVIG00000005145) FASTKD2 (ENSNVIG00000005116) CBPO (ENSNVIG00000005106) KLF7 (ENSNVIG00000005091) CREB1 (ENSNVIG00000005058) METTL21A (ENSNVIG00000005027) ENSNVIG00000005020 ENSNVIG00000004981 FZD5 (ENSNVIG00000004971) PKHM3 (ENSNVIG00000004953) Ferret MODERN SPECIES 265 NBEAL1 (ENSMPUG00000000385) ENSMPUG00000000395 ENSMPUG00000000397 ABI2 (ENSMPUG00000000402) RAPH1 (ENSMPUG00000000405) CD28 (ENSMPUG00000000418) CTLA4 (ENSMPUG00000000422) ICOS (ENSMPUG00000000425) ENSMPUG00000000428 ENSMPUG00000000430 PARD3B (ENSMPUG00000000432) NRP2 (ENSMPUG00000000435) ENSMPUG00000000437 INO80D (ENSMPUG00000000439) NDUFS1 (ENSMPUG00000000442) EEF1B2 (ENSMPUG00000000444) ##22 CMKLR2 (ENSMPUG00000018909) ZDBF2 (ENSMPUG00000000463) ADAM23 (ENSMPUG00000000467) ENSMPUG00000000471 MDH1B (ENSMPUG00000000473) FASTKD2 (ENSMPUG00000000477) CPO (ENSMPUG00000000481) KLF7 (ENSMPUG00000000483) CREB1 (ENSMPUG00000000485) ENSMPUG00000018911 ENSMPUG00000000487 ENSMPUG00000000489 FZD5 (ENSMPUG00000018918) PLEKHM3 (ENSMPUG00000000492) ENSMPUG00000000496 Ursidae ANCESTRAL SPECIES 7 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00940000157820.a.a.k ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.bb Ursus ANCESTRAL SPECIES 4 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00940000157820.a.a.k ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00910000148124 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.bb American black bear MODERN SPECIES 5648 ENSUAMG00000026422 EEF1B2 (ENSUAMG00000026423) ##22 CMKLR2 (ENSUAMG00000026429) Polar bear MODERN SPECIES 142 CARF (ENSUMAG00000021907) ENSUMAG00000021909 NBEAL1 (ENSUMAG00000021925) CYP20A1 (ENSUMAG00000022062) ABI2 (ENSUMAG00000022146) RAPH1 (ENSUMAG00000022157) ENSUMAG00000022213 CD28 (ENSUMAG00000022222) CTLA4 (ENSUMAG00000022223) ICOS (ENSUMAG00000022228) PARD3B (ENSUMAG00000022273) NRP2 (ENSUMAG00000022446) ENSUMAG00000022452 INO80D (ENSUMAG00000022462) NDUFS1 (ENSUMAG00000022473) EEF1B2 (ENSUMAG00000022481) ##22 ZDBF2 (ENSUMAG00000022505) ADAM23 (ENSUMAG00000022533) FAM237A (ENSUMAG00000022571) DYTN (ENSUMAG00000022576) MDH1B (ENSUMAG00000022585) FASTKD2 (ENSUMAG00000022590) CPO (ENSUMAG00000022606) KLF7 (ENSUMAG00000022629) METTL21A (ENSUMAG00000022649) CREB1 (ENSUMAG00000022656) ENSUMAG00000022665 PLEKHM3 (ENSUMAG00000022668) ENSUMAG00000022672 CRYGD (ENSUMAG00000022673) CRYGC (ENSUMAG00000022675) Giant Panda DUPLICATION Giant Panda MODERN SPECIES 11 ICA1L (ENSAMEG00000013120) WDR12 (ENSAMEG00000013091) CARF (ENSAMEG00000013068) NBEAL1 (ENSAMEG00000013020) ABI2 (ENSAMEG00000012960) ENSAMEG00000002970 ENSAMEG00000030945 ENSAMEG00000028551 CD28 (ENSAMEG00000002955) CTLA4 (ENSAMEG00000002942) ICOS (ENSAMEG00000002936) PARD3B (ENSAMEG00000002930) NRP2 (ENSAMEG00000003086) INO80D (ENSAMEG00000003072) NDUFS1 (ENSAMEG00000003030) ENSAMEG00000003015 ##22 ZDBF2 (ENSAMEG00000029468) CMKLR2 (ENSAMEG00000003011) ADAM23 (ENSAMEG00000002950) FAM237A (ENSAMEG00000029073) DYTN (ENSAMEG00000025472) MDH1B (ENSAMEG00000002932) FASTKD2 (ENSAMEG00000002917) CPO (ENSAMEG00000015096) KLF7 (ENSAMEG00000015148) CREB1 (ENSAMEG00000015152) METTL21A (ENSAMEG00000015168) ENSAMEG00000015175 FZD5 (ENSAMEG00000015206) PLEKHM3 (ENSAMEG00000015216) ENSAMEG00000023570 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 657 ENSAMEG00000028516 ##22 ENSAMEG00000026231 ##22 Giant Panda MODERN SPECIES 657 ENSAMEG00000028516 ##22 ENSAMEG00000026231 ##22 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Cetacea ANCESTRAL SPECIES 14 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00390000006670.d Odontoceti ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00390000004738.q.b ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 Sperm whale MODERN SPECIES 11 NBEAL1 (ENSPCTG00005003780) CYP20A1 (ENSPCTG00005003802) ABI2 (ENSPCTG00005003833) RAPH1 (ENSPCTG00005003938) ENSPCTG00005005119 CTLA4 (ENSPCTG00005005168) ICOS (ENSPCTG00005005246) ENSPCTG00005005318 ENSPCTG00005005328 PARD3B (ENSPCTG00005005375) NRP2 (ENSPCTG00005005530) ENSPCTG00005006370 INO80D (ENSPCTG00005006389) ENSPCTG00005006412 NDUFS1 (ENSPCTG00005006448) EEF1B2 (ENSPCTG00005006746) ##22 GPR1 (ENSPCTG00005006803) ZDBF2 (ENSPCTG00005006840) ADAM23 (ENSPCTG00005007031) FAM237A (ENSPCTG00005007294) DYTN (ENSPCTG00005007310) MDH1B (ENSPCTG00005007378) FASTKD2 (ENSPCTG00005004965) KLF7 (ENSPCTG00005005002) CREB1 (ENSPCTG00005005085) METTL21A (ENSPCTG00005005122) ENSPCTG00005005181 ENSPCTG00005005205 CCNYL1 (ENSPCTG00005005234) FZD5 (ENSPCTG00005005280) PLEKHM3 (ENSPCTG00005005303) Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00390000006670.d Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00960000190610 ENSGT00440000037606.b ENSGT00910000144184.r.a.a.a.a ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00940000154453.b.b ENSGT00940000162639 Monodontidae ANCESTRAL SPECIES 10 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00950000183010.a.b.a.a.b ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00960000190610 ENSGT00440000037606.b ENSGT00910000144184.r.a.a.a.a ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00390000001958.n.a.g ENSGT00940000154453.b.b ENSGT00940000162639 Narwhal MODERN SPECIES 302 CARF (ENSMMNG00015007132) NBEAL1 (ENSMMNG00015007045) CYP20A1 (ENSMMNG00015007001) ABI2 (ENSMMNG00015006963) RAPH1 (ENSMMNG00015006494) ENSMMNG00015006290 CD28 (ENSMMNG00015006278) CTLA4 (ENSMMNG00015006260) ICOS (ENSMMNG00015006232) ENSMMNG00015006206 ENSMMNG00015006192 PARD3B (ENSMMNG00015005987) NRP2 (ENSMMNG00015005855) INO80D (ENSMMNG00015005802) NDUFS1 (ENSMMNG00015005695) EEF1B2 (ENSMMNG00015005617) ##22 CMKLR2 (ENSMMNG00015005602) ENSMMNG00015005593 ZDBF2 (ENSMMNG00015005582) ENSMMNG00015005570 ADAM23 (ENSMMNG00015005478) FAM237A (ENSMMNG00015005439) DYTN (ENSMMNG00015005422) MDH1B (ENSMMNG00015005351) FASTKD2 (ENSMMNG00015005336) KLF7 (ENSMMNG00015005320) CREB1 (ENSMMNG00015005293) METTL21A (ENSMMNG00015005268) ENSMMNG00015005252 ENSMMNG00015005240 ENSMMNG00015005216 Beluga whale MODERN SPECIES 84 NBEAL1 (ENSDLEG00000018755) ENSDLEG00000020428 ENSDLEG00000008100 RAPH1 (ENSDLEG00000008223) ENSDLEG00000008980 ENSDLEG00000009004 CTLA4 (ENSDLEG00000009020) ICOS (ENSDLEG00000009050) ENSDLEG00000009073 ENSDLEG00000009090 ENSDLEG00000009108 PARD3B (ENSDLEG00000009127) NRP2 (ENSDLEG00000009192) INO80D (ENSDLEG00000009298) NDUFS1 (ENSDLEG00000009340) EEF1B2 (ENSDLEG00000009390) ##22 GPR1 (ENSDLEG00000009434) ENSDLEG00000009440 ZDBF2 (ENSDLEG00000009453) ADAM23 (ENSDLEG00000009497) FAM237A (ENSDLEG00000009620) DYTN (ENSDLEG00000009655) MDH1B (ENSDLEG00000009773) FASTKD2 (ENSDLEG00000009822) KLF7 (ENSDLEG00000009871) CREB1 (ENSDLEG00000009895) METTL21A (ENSDLEG00000009925) ENSDLEG00000009942 ENSDLEG00000009965 CCNYL1 (ENSDLEG00000009986) FZD5 (ENSDLEG00000010035) Vaquita MODERN SPECIES 18 ICA1L (ENSPSNG00000012492) WDR12 (ENSPSNG00000012441) CARF (ENSPSNG00000011886) NBEAL1 (ENSPSNG00000011649) CYP20A1 (ENSPSNG00000011532) ABI2 (ENSPSNG00000011330) RAPH1 (ENSPSNG00000009801) ENSPSNG00000009309 CTLA4 (ENSPSNG00000009249) ICOS (ENSPSNG00000009099) PARD3B (ENSPSNG00000008898) NRP2 (ENSPSNG00000008707) ENSPSNG00000008614 INO80D (ENSPSNG00000008590) NDUFS1 (ENSPSNG00000008252) EEF1B2 (ENSPSNG00000008153) ##22 CMKLR2 (ENSPSNG00000008130) ENSPSNG00000008115 ZDBF2 (ENSPSNG00000008096) ENSPSNG00000008082 ADAM23 (ENSPSNG00000007702) FAM237A (ENSPSNG00000022142) DYTN (ENSPSNG00000022128) MDH1B (ENSPSNG00000022108) FASTKD2 (ENSPSNG00000022088) KLF7 (ENSPSNG00000022054) CREB1 (ENSPSNG00000022021) METTL21A (ENSPSNG00000022000) ENSPSNG00000021984 ENSPSNG00000021964 ENSPSNG00000021936 Dolphin MODERN SPECIES 3528 INO80D (ENSTTRG00000012758) NDUFS1 (ENSTTRG00000012767) EEF1B2 (ENSTTRG00000012780) ##22 GPR1 (ENSTTRG00000012784) ENSTTRG00000012788 Blue whale MODERN SPECIES 18 ENSBMSG00010006612 CYP20A1 (ENSBMSG00010006657) ABI2 (ENSBMSG00010006723) ENSBMSG00010000193 ENSBMSG00010000215 ENSBMSG00010000230 ENSBMSG00010000252 ICOS (ENSBMSG00010000278) ENSBMSG00010000353 PARD3B (ENSBMSG00010000409) NRP2 (ENSBMSG00010000535) ENSBMSG00010001002 INO80D (ENSBMSG00010001021) ENSBMSG00010001036 NDUFS1 (ENSBMSG00010001085) EEF1B2 (ENSBMSG00010001199) ##22 CMKLR2 (ENSBMSG00010001229) ZDBF2 (ENSBMSG00010001246) ADAM23 (ENSBMSG00010001305) FAM237A (ENSBMSG00010001408) DYTN (ENSBMSG00010001424) MDH1B (ENSBMSG00010001465) FASTKD2 (ENSBMSG00010001509) KLF7 (ENSBMSG00010001534) CREB1 (ENSBMSG00010001606) METTL21A (ENSBMSG00010001644) ENSBMSG00010001661 ENSBMSG00010001666 IDH1 (ENSBMSG00010001674) PIKFYVE (ENSBMSG00010001711) PTH2R (ENSBMSG00010001780) Pecora DUPLICATION Pecora DUPLICATION Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES 5 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00900000143081 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT01010000230154 ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00950000183014.f.a.h.u.a.a.a ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908 ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000164632.b ENSGT00940000155936.b ENSGT00950000183021.b Yarkand deer MODERN SPECIES 3 TOX4 (ENSCHYG00000009949) METTL3 (ENSCHYG00000009777) SALL2 (ENSCHYG00000009676) ENSCHYG00000009619 OR10G3 (ENSCHYG00000009604) ENSCHYG00000009578 OR4E2 (ENSCHYG00000009552) OR4E1 (ENSCHYG00000009527) ENSCHYG00000009499 TRDV2 (ENSCHYG00000009486) ENSCHYG00000009457 TRDV3 (ENSCHYG00000020003) ENSCHYG00000019884 ENSCHYG00000019819 ABHD4 (ENSCHYG00000019707) ENSCHYG00000019651 ##22 ENSCHYG00000019500 OXA1L (ENSCHYG00000019267) ENSCHYG00000018959 SLC7A7 (ENSCHYG00000018767) MMP14 (ENSCHYG00000018620) LRP10 (ENSCHYG00000018426) REM2 (ENSCHYG00000018358) RBM23 (ENSCHYG00000018246) PRMT5 (ENSCHYG00000017109) HAUS4 (ENSCHYG00000016879) AJUBA (ENSCHYG00000016731) C14orf93 (ENSCHYG00000016592) ENSCHYG00000016436 PSMB11 (ENSCHYG00000016390) CDH24 (ENSCHYG00000016351) Percora_a ANCESTRAL SPECIES 13 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00900000143081 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT01010000230154 ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00950000183014.f.a.h.u.a.a.a ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908 ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000164632.b ENSGT00940000155936.b.b ENSGT00950000183021.b Siberian musk deer MODERN SPECIES 71 ENSMMSG00000003616 ENSMMSG00000003604 ENSMMSG00000003592 ENSMMSG00000003582 ENSMMSG00000003577 ENSMMSG00000003570 ENSMMSG00000003561 ENSMMSG00000003541 TRDV2 (ENSMMSG00000003533) ENSMMSG00000003520 TRDV3 (ENSMMSG00000003515) ENSMMSG00000003477 DAD1 (ENSMMSG00000003453) ABHD4 (ENSMMSG00000003438) ENSMMSG00000003428 ENSMMSG00000003418 ##22 ENSMMSG00000003410 ENSMMSG00000003399 ENSMMSG00000003376 ENSMMSG00000003366 ENSMMSG00000003356 OXA1L (ENSMMSG00000003331) SLC7A7 (ENSMMSG00000003307) MRPL52 (ENSMMSG00000003274) MMP14 (ENSMMSG00000003242) LRP10 (ENSMMSG00000003220) REM2 (ENSMMSG00000003202) RBM23 (ENSMMSG00000003104) PRMT5 (ENSMMSG00000002569) HAUS4 (ENSMMSG00000002467) AJUBA (ENSMMSG00000002391) Bovidae ANCESTRAL SPECIES 5 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00900000143081 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT01010000230154 ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00950000183014.f.a.h.u.a.a.a ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908 ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000164632.b ENSGT00940000155936.b.b ENSGT00950000183021.b Caprinae ANCESTRAL SPECIES 9 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00900000143081 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT01010000230154 ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00950000183014.f.a.h.u.a.a.a ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908 ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000155936.b.b ENSGT00950000183021.b ENSGT00500000044959 Goat MODERN SPECIES 2 TTC32 (ENSCHIG00000025091) WDR35 (ENSCHIG00000006588) MATN3 (ENSCHIG00000018061) LAPTM4A (ENSCHIG00000022265) SDC1 (ENSCHIG00000018782) ENSCHIG00000025915 PUM2 (ENSCHIG00000022180) ENSCHIG00000018368 RHOB (ENSCHIG00000012713) HS1BP3 (ENSCHIG00000026302) GDF7 (ENSCHIG00000011381) ENSCHIG00000024630 LDAH (ENSCHIG00000013047) APOB (ENSCHIG00000016651) TDRD15 (ENSCHIG00000024751) ENSCHIG00000013040 ##22 KLHL29 (ENSCHIG00000021081) ATAD2B (ENSCHIG00000016699) UBXN2A (ENSCHIG00000008772) MFSD2B (ENSCHIG00000015093) WDCP (ENSCHIG00000017430) FKBP1B (ENSCHIG00000025133) SF3B6 (ENSCHIG00000009902) TP53I3 (ENSCHIG00000007693) PFN4 (ENSCHIG00000026277) FAM228B (ENSCHIG00000022823) ENSCHIG00000012771 ITSN2 (ENSCHIG00000012898) NCOA1 (ENSCHIG00000016656) PTRHD1 (ENSCHIG00000014757) ENSCHIG00000014194 Rambouillet Sheep MODERN SPECIES 19 NT5C1B (ENSOARG00020017529) OSR1 (ENSOARG00020017609) TTC32 (ENSOARG00020017652) WDR35 (ENSOARG00020017694) MATN3 (ENSOARG00020018018) LAPTM4A (ENSOARG00020018198) SDC1 (ENSOARG00020018247) PUM2 (ENSOARG00020018298) RHOB (ENSOARG00020018495) HS1BP3 (ENSOARG00020018571) GDF7 (ENSOARG00020018622) LDAH (ENSOARG00020018657) ENSOARG00020018924 ENSOARG00020018981 TDRD15 (ENSOARG00020019143) ENSOARG00020019194 ##22 ENSOARG00020019210 KLHL29 (ENSOARG00020019264) ATAD2B (ENSOARG00020019344) ENSOARG00020019629 UBXN2A (ENSOARG00020019662) MFSD2B (ENSOARG00020019757) FKBP1B (ENSOARG00020019964) SF3B6 (ENSOARG00020020043) TP53I3 (ENSOARG00020020085) PFN4 (ENSOARG00020020118) FAM228B (ENSOARG00020020153) ENSOARG00020020223 ITSN2 (ENSOARG00020020291) NCOA1 (ENSOARG00020020912) PTRHD1 (ENSOARG00020021146) Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.u.a.a.a.a ##22 American bison MODERN SPECIES 3371 ENSBBBG00000006330 TRAV26-2 (ENSBBBG00000024297) ENSBBBG00000024291 ENSBBBG00000024285 ENSBBBG00000024277 ENSBBBG00000024222 ENSBBBG00000024219 ENSBBBG00000008989 ENSBBBG00000024211 ENSBBBG00000024207 ENSBBBG00000006296 DAD1 (ENSBBBG00000024198) ABHD4 (ENSBBBG00000008871) ENSBBBG00000024178 ##22 ENSBBBG00000024170 ENSBBBG00000008646 ##22 ENSBBBG00000024153 ENSBBBG00000008981 ENSBBBG00000024137 ENSBBBG00000024134 OXA1L (ENSBBBG00000024118) SLC7A7 (ENSBBBG00000024018) MRPL52 (ENSBBBG00000023959) MMP14 (ENSBBBG00000023905) LRP10 (ENSBBBG00000000301) REM2 (ENSBBBG00000008315) RBM23 (ENSBBBG00000006214) PRMT5 (ENSBBBG00000023731) HAUS4 (ENSBBBG00000023502) AJUBA (ENSBBBG00000023373) C14orf93 (ENSBBBG00000023354) Bovinae ANCESTRAL SPECIES 4 ENSGT00390000017767.b.a ENSGT00940000158993 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00950000183014.f.a.h.u.a.a.a.b ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908.s.a ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000164632.b ENSGT00940000155936.b.b ENSGT00950000183021.b Bos ANCESTRAL SPECIES 5 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00550000074784.a.b ENSGT01030000234916.g.a ENSGT00950000183014.f.a.h.u.a.a.a.b ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908.s.a ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000164632.b ENSGT00940000155936.b.b ENSGT00950000183021.b Bos_b ANCESTRAL SPECIES 16 ENSGT00940000155745 ENSGT00940000157581 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.b.b ENSGT00940000153446.b ENSGT00940000161171 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00550000074784.a.b ENSGT01030000234916.g.a.a ENSGT00950000183014.f.a.h.u.a.a.a.b ##22 ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908.s.a ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000164632.b ENSGT00940000155936.b.b ENSGT01100000263480.a.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000183021.b Hybrid Bos Indicus MODERN SPECIES 2 WDR35 (ENSBIXG00005025304) MATN3 (ENSBIXG00005006070) ENSBIXG00005025414 LAPTM4A (ENSBIXG00005025436) SDC1 (ENSBIXG00005004335) PUM2 (ENSBIXG00005004375) ENSBIXG00005025762 RHOB (ENSBIXG00005004398) HS1BP3 (ENSBIXG00005025838) GDF7 (ENSBIXG00005025857) LDAH (ENSBIXG00005026010) APOB (ENSBIXG00005006700) TDRD15 (ENSBIXG00005026149) ENSBIXG00005026182 ENSBIXG00005005602 ENSBIXG00005026241 ##22 ENSBIXG00005026267 KLHL29 (ENSBIXG00005004508) ENSBIXG00005026418 ATAD2B (ENSBIXG00005026503) UBXN2A (ENSBIXG00005026562) MFSD2B (ENSBIXG00005026634) WDCP (ENSBIXG00005026653) FKBP1B (ENSBIXG00005026682) ENSBIXG00005004563 TP53I3 (ENSBIXG00005026721) PFN4 (ENSBIXG00005004569) ENSBIXG00005026774 ITSN2 (ENSBIXG00005026878) ENSBIXG00005004595 ENSBIXG00005026925 Cow MODERN SPECIES 2 TTC32 (ENSBTAG00000015587) WDR35 (ENSBTAG00000051164) MATN3 (ENSBTAG00000020893) ENSBTAG00000052052 LAPTM4A (ENSBTAG00000020894) SDC1 (ENSBTAG00000011154) PUM2 (ENSBTAG00000011155) ENSBTAG00000049117 HS1BP3 (ENSBTAG00000015490) GDF7 (ENSBTAG00000038224) LDAH (ENSBTAG00000031014) APOB (ENSBTAG00000008505) TDRD15 (ENSBTAG00000051889) ENSBTAG00000030834 ENSBTAG00000054991 ENSBTAG00000004565 ##22 KLHL29 (ENSBTAG00000021969) ATAD2B (ENSBTAG00000017255) UBXN2A (ENSBTAG00000002033) MFSD2B (ENSBTAG00000002034) WDCP (ENSBTAG00000016987) FKBP1B (ENSBTAG00000003409) SF3B6 (ENSBTAG00000003407) TP53I3 (ENSBTAG00000003405) PFN4 (ENSBTAG00000003404) FAM228B (ENSBTAG00000030864) FAM228A (ENSBTAG00000000261) ENSBTAG00000051942 ITSN2 (ENSBTAG00000023172) ENSBTAG00000049243 NCOA1 (ENSBTAG00000015007) Bos_a ANCESTRAL SPECIES 6 ENSGT00940000158993 ENSGT00390000011905 ENSGT00940000155745 ENSGT00940000157581 ENSGT00940000153446.b ENSGT00940000161171 ENSGT00940000157575 ENSGT00940000162520.d ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000013092 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139 ENSGT00940000162581 ENSGT00550000074784.a.b ENSGT00950000183014.f.a.h.u.a.a.a.b ##22 ENSGT00930000152728.b.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000005908.t ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a ENSGT00530000064185.b ENSGT00940000155936.b.b ENSGT00950000183021.b ENSGT00500000044959 Wild yak MODERN SPECIES 752 NT5C1B (ENSBMUG00000005486) OSR1 (ENSBMUG00000005507) ENSBMUG00000005524 WDR35 (ENSBMUG00000005571) MATN3 (ENSBMUG00000005603) LAPTM4A (ENSBMUG00000005607) SDC1 (ENSBMUG00000005608) PUM2 (ENSBMUG00000005650) ENSBMUG00000005710 RHOB (ENSBMUG00000005721) HS1BP3 (ENSBMUG00000005770) LDAH (ENSBMUG00000005822) APOB (ENSBMUG00000005903) TDRD15 (ENSBMUG00000005920) ENSBMUG00000005934 ENSBMUG00000005946 ##22 ENSBMUG00000005951 ENSBMUG00000005963 KLHL29 (ENSBMUG00000005980) ATAD2B (ENSBMUG00000006045) UBXN2A (ENSBMUG00000006075) MFSD2B (ENSBMUG00000006096) WDCP (ENSBMUG00000006107) FKBP1B (ENSBMUG00000006132) ENSBMUG00000006141 TP53I3 (ENSBMUG00000006147) PFN4 (ENSBMUG00000006151) FAM228B (ENSBMUG00000006164) ENSBMUG00000006172 ITSN2 (ENSBMUG00000006272) NCOA1 (ENSBMUG00000006387) American bison MODERN SPECIES 3068 ENSBBBG00000019450 NT5C1B (ENSBBBG00000009192) OSR1 (ENSBBBG00000019430) TTC32 (ENSBBBG00000006785) WDR35 (ENSBBBG00000007319) MATN3 (ENSBBBG00000019335) LAPTM4A (ENSBBBG00000007183) SDC1 (ENSBBBG00000009171) PUM2 (ENSBBBG00000019297) ENSBBBG00000019228 RHOB (ENSBBBG00000019223) HS1BP3 (ENSBBBG00000019208) LDAH (ENSBBBG00000019145) APOB (ENSBBBG00000019104) TDRD15 (ENSBBBG00000004866) ENSBBBG00000004865 ##22 ENSBBBG00000004864 KLHL29 (ENSBBBG00000019026) ATAD2B (ENSBBBG00000018952) UBXN2A (ENSBBBG00000018929) MFSD2B (ENSBBBG00000004782) WDCP (ENSBBBG00000018782) FKBP1B (ENSBBBG00000004715) ENSBBBG00000018761 TP53I3 (ENSBBBG00000018749) PFN4 (ENSBBBG00000018737) FAM228B (ENSBBBG00000018728) ENSBBBG00000018716 ITSN2 (ENSBBBG00000018695) NCOA1 (ENSBBBG00000018553) PTRHD1 (ENSBBBG00000004568) Pecora DUPLICATION Pecora ANCESTRAL SPECIES 16 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s Yarkand deer MODERN SPECIES 31 NBEAL1 (ENSCHYG00000003290) CYP20A1 (ENSCHYG00000003265) ENSCHYG00000003256 ABI2 (ENSCHYG00000003231) RAPH1 (ENSCHYG00000002595) CD28 (ENSCHYG00000002432) CTLA4 (ENSCHYG00000002394) ICOS (ENSCHYG00000002371) ENSCHYG00000002349 ENSCHYG00000002345 PARD3B (ENSCHYG00000002220) NRP2 (ENSCHYG00000002124) ENSCHYG00000002093 INO80D (ENSCHYG00000002072) NDUFS1 (ENSCHYG00000001983) ENSCHYG00000001947 ##22 ENSCHYG00000001938 CMKLR2 (ENSCHYG00000001927) ZDBF2 (ENSCHYG00000001897) ADAM23 (ENSCHYG00000001792) FAM237A (ENSCHYG00000001756) DYTN (ENSCHYG00000001729) ENSCHYG00000001715 MDH1B (ENSCHYG00000001680) FASTKD2 (ENSCHYG00000001648) CPO (ENSCHYG00000001618) KLF7 (ENSCHYG00000001583) CREB1 (ENSCHYG00000001543) ENSCHYG00000001504 FZD5 (ENSCHYG00000001477) ENSCHYG00000001470 Percora_a ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s Bovidae ANCESTRAL SPECIES 8 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s Bovinae ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s Bos ANCESTRAL SPECIES 6 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s Bos_a ANCESTRAL SPECIES 4 ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00510000047245.w.a.a.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 Domestic yak MODERN SPECIES 11 ENSBGRG00000016261 NBEAL1 (ENSBGRG00000016043) CYP20A1 (ENSBGRG00000015562) ABI2 (ENSBGRG00000014834) ENSBGRG00000012733 CD28 (ENSBGRG00000012545) CTLA4 (ENSBGRG00000012384) ENSBGRG00000012357 ICOS (ENSBGRG00000012246) ENSBGRG00000012209 PARD3B (ENSBGRG00000011721) NRP2 (ENSBGRG00000010098) ENSBGRG00000010010 INO80D (ENSBGRG00000009960) NDUFS1 (ENSBGRG00000009516) ENSBGRG00000009445 ##22 CMKLR2 (ENSBGRG00000009401) ZDBF2 (ENSBGRG00000009322) ENSBGRG00000009270 ADAM23 (ENSBGRG00000008490) FAM237A (ENSBGRG00000008425) MDH1B (ENSBGRG00000008141) FASTKD2 (ENSBGRG00000008051) CPO (ENSBGRG00000007969) ENSBGRG00000007943 KLF7 (ENSBGRG00000007842) CREB1 (ENSBGRG00000007627) METTL21A (ENSBGRG00000007457) ENSBGRG00000007199 FZD5 (ENSBGRG00000007062) ENSBGRG00000007042 Wild yak MODERN SPECIES 1701 ENSBMUG00000019977 NRP2 (ENSBMUG00000019949) INO80D (ENSBMUG00000019906) NDUFS1 (ENSBMUG00000019884) ENSBMUG00000019833 ##22 CMKLR2 (ENSBMUG00000019826) Bos_b ANCESTRAL SPECIES 3 ENSGT00930000150950.b ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT01100000263480.a.a.b.a.a.a.b.b.a.a.a.a.a.a ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00510000047245.w.a.a.b ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 Cow MODERN SPECIES 11 ABI2 (ENSBTAG00000011017) RAPH1 (ENSBTAG00000027201) CD28 (ENSBTAG00000007445) ENSBTAG00000051061 CTLA4 (ENSBTAG00000013170) ICOS (ENSBTAG00000021596) ENSBTAG00000040367 ENSBTAG00000051630 ENSBTAG00000049320 PARD3B (ENSBTAG00000010293) ENSBTAG00000053833 NRP2 (ENSBTAG00000011971) INO80D (ENSBTAG00000014407) ENSBTAG00000055132 NDUFS1 (ENSBTAG00000021976) EEF1B2 (ENSBTAG00000021979) ##22 CMKLR2 (ENSBTAG00000017043) ZDBF2 (ENSBTAG00000031166) ADAM23 (ENSBTAG00000019694) ENSBTAG00000055316 FAM237A (ENSBTAG00000050134) DYTN (ENSBTAG00000046454) MDH1B (ENSBTAG00000016192) FASTKD2 (ENSBTAG00000016193) CPO (ENSBTAG00000019190) KLF7 (ENSBTAG00000044097) CREB1 (ENSBTAG00000005474) METTL21A (ENSBTAG00000052083) CCNYL1 (ENSBTAG00000016297) FZD5 (ENSBTAG00000020957) PLEKHM3 (ENSBTAG00000007830) Hybrid Bos Indicus MODERN SPECIES 11 CARF (ENSBIXG00005031586) ENSBIXG00005031587 NBEAL1 (ENSBIXG00005031588) CYP20A1 (ENSBIXG00005031589) ABI2 (ENSBIXG00005031590) RAPH1 (ENSBIXG00005031591) CD28 (ENSBIXG00005031593) CTLA4 (ENSBIXG00005031594) ICOS (ENSBIXG00005031595) PARD3B (ENSBIXG00005031598) ENSBIXG00005031599 NRP2 (ENSBIXG00005031600) INO80D (ENSBIXG00005031603) ENSBIXG00005031604 NDUFS1 (ENSBIXG00005031605) ENSBIXG00005031606 ##22 CMKLR2 (ENSBIXG00005031611) ZDBF2 (ENSBIXG00005031612) ADAM23 (ENSBIXG00005031613) ENSBIXG00005031614 DYTN (ENSBIXG00005031615) MDH1B (ENSBIXG00005031616) FASTKD2 (ENSBIXG00005031617) CPO (ENSBIXG00005031618) KLF7 (ENSBIXG00005031620) ENSBIXG00005031623 CREB1 (ENSBIXG00005031624) FZD5 (ENSBIXG00005031625) ENSBIXG00005031627 ENSBIXG00005001549 PLEKHM3 (ENSBIXG00005001556) American bison MODERN SPECIES 3330 ENSBBBG00000012094 ICA1L (ENSBBBG00000012090) WDR12 (ENSBBBG00000012064) CARF (ENSBBBG00000012044) NBEAL1 (ENSBBBG00000011985) CYP20A1 (ENSBBBG00000002236) ABI2 (ENSBBBG00000011940) ENSBBBG00000011830 CD28 (ENSBBBG00000002157) CTLA4 (ENSBBBG00000002155) ICOS (ENSBBBG00000011656) PARD3B (ENSBBBG00000011555) NRP2 (ENSBBBG00000011269) INO80D (ENSBBBG00000011164) NDUFS1 (ENSBBBG00000011148) ENSBBBG00000011052 ##22 CMKLR2 (ENSBBBG00000011031) ZDBF2 (ENSBBBG00000011029) ADAM23 (ENSBBBG00000011005) FAM237A (ENSBBBG00000010954) DYTN (ENSBBBG00000010949) MDH1B (ENSBBBG00000010925) FASTKD2 (ENSBBBG00000010905) CPO (ENSBBBG00000010898) ENSBBBG00000010890 KLF7 (ENSBBBG00000010885) CREB1 (ENSBBBG00000010873) METTL21A (ENSBBBG00000010854) ENSBBBG00000010833 FZD5 (ENSBBBG00000010805) PLEKHM3 (ENSBBBG00000010799) Caprinae ANCESTRAL SPECIES 23 ENSGT00940000154866.B ENSGT00550000075046 ENSGT00550000074931 ENSGT00390000004987 ENSGT00940000162552 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000155114.wb.b ENSGT00940000163276 ENSGT00940000156996 ENSGT00950000183014.f.a.h.u.a.a.b.a ##22 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b ENSGT00900000141212 ENSGT00910000144356 ENSGT00940000162636.B ENSGT00940000165454 ENSGT00940000162294 ENSGT00940000163249 ENSGT00940000161877.i ENSGT00940000161877.j ENSGT00940000154755 ENSGT00950000183147.B ENSGT00940000160277 ENSGT00440000039984.a Goat MODERN SPECIES 4 CFAP61 (ENSCHIG00000022048) INSM1 (ENSCHIG00000002944) RALGAPA2 (ENSCHIG00000023081) ENSCHIG00000005268 ENSCHIG00000001410 KIZ (ENSCHIG00000020496) XRN2 (ENSCHIG00000006921) ENSCHIG00000009213 NKX2-4 (ENSCHIG00000017092) NKX2-2 (ENSCHIG00000025252) PAX1 (ENSCHIG00000025250) FOXA2 (ENSCHIG00000013879) ENSCHIG00000022438 THBD (ENSCHIG00000010975) CD93 (ENSCHIG00000009092) ENSCHIG00000021979 ##22 GZF1 (ENSCHIG00000008882) NAPB (ENSCHIG00000020249) ENSCHIG00000021813 ENSCHIG00000003642 ENSCHIG00000017766 ENSCHIG00000025947 ENSCHIG00000021829 ENSCHIG00000009930 ENSCHIG00000022173 CST3 (ENSCHIG00000009090) SYNDIG1 (ENSCHIG00000020378) CST7 (ENSCHIG00000021898) APMAP (ENSCHIG00000013115) ACSS1 (ENSCHIG00000021744) VSX1 (ENSCHIG00000022900) Rambouillet Sheep MODERN SPECIES 4 RIN2 (ENSOARG00020003240) NAA20 (ENSOARG00020003499) CRNKL1 (ENSOARG00020003543) CFAP61 (ENSOARG00020003632) INSM1 (ENSOARG00020003800) RALGAPA2 (ENSOARG00020003837) KIZ (ENSOARG00020004321) XRN2 (ENSOARG00020004498) NKX2-4 (ENSOARG00020004533) NKX2-2 (ENSOARG00020004554) PAX1 (ENSOARG00020004579) ENSOARG00020004631 FOXA2 (ENSOARG00020004643) ENSOARG00020004667 CD93 (ENSOARG00020004706) ENSOARG00020004719 ##22 NXT1 (ENSOARG00020004744) GZF1 (ENSOARG00020004766) NAPB (ENSOARG00020004860) CSTL1 (ENSOARG00020005157) ENSOARG00020005178 ENSOARG00020005206 ENSOARG00020005223 ENSOARG00020005233 ENSOARG00020005253 ENSOARG00020005269 ENSOARG00020005290 ENSOARG00020005305 CST3 (ENSOARG00020005311) SYNDIG1 (ENSOARG00020005336) APMAP (ENSOARG00020005374) Siberian musk deer MODERN SPECIES 1148 SMAP1 (ENSMMSG00000004653) ENSMMSG00000004827 ##22 B3GAT2 (ENSMMSG00000004859) ENSMMSG00000004888 OGFRL1 (ENSMMSG00000004924) RIMS1 (ENSMMSG00000005532) KCNQ5 (ENSMMSG00000015246) ENSMMSG00000015590 OOEP (ENSMMSG00000015604) ENSMMSG00000015627 Pecora ANCESTRAL SPECIES 208 ENSGT00930000152728.b.a ENSGT00950000183014.f.a.h.u.a.a.b.b ##22 Percora_a ANCESTRAL SPECIES 206 ENSGT00930000152728.b.a ENSGT00950000183014.f.a.h.u.a.a.b.b ##22 Bovidae ANCESTRAL SPECIES 197 ENSGT00930000152728.b.a ENSGT00950000183014.f.a.h.u.a.a.b.b ##22 Caprinae ANCESTRAL SPECIES 5 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h.u.a.a.b.b ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 11 WDR12 (ENSOARG00020006896) CARF (ENSOARG00020006968) NBEAL1 (ENSOARG00020007440) CYP20A1 (ENSOARG00020007538) ABI2 (ENSOARG00020007596) RAPH1 (ENSOARG00020007863) ENSOARG00020008167 CD28 (ENSOARG00020008197) CTLA4 (ENSOARG00020008302) ICOS (ENSOARG00020008420) PARD3B (ENSOARG00020008587) NRP2 (ENSOARG00020013172) ENSOARG00020013371 INO80D (ENSOARG00020013391) NDUFS1 (ENSOARG00020013502) ENSOARG00020014163 ##22 GPR1 (ENSOARG00020014248) ZDBF2 (ENSOARG00020014286) ADAM23 (ENSOARG00020014405) FAM237A (ENSOARG00020014982) DYTN (ENSOARG00020015031) MDH1B (ENSOARG00020015160) FASTKD2 (ENSOARG00020015403) CPO (ENSOARG00020015466) KLF7 (ENSOARG00020015555) CREB1 (ENSOARG00020015664) METTL21A (ENSOARG00020015859) ENSOARG00020016023 FZD5 (ENSOARG00020016197) PLEKHM3 (ENSOARG00020016241) ENSOARG00020016435 Rambouillet Sheep MODERN SPECIES 19 PAIP2B (ENSOARG00020005747) NAGK (ENSOARG00020005719) TEX261 (ENSOARG00020005704) ANKRD53 (ENSOARG00020005675) ATP6V1B1 (ENSOARG00020005560) VAX2 (ENSOARG00020005545) CD207 (ENSOARG00020005507) ENSOARG00020005471 FIGLA (ENSOARG00020005437) ADD2 (ENSOARG00020005142) TGFA (ENSOARG00020005087) ENSOARG00020005077 ENSOARG00020005043 XDH (ENSOARG00020004988) ENSOARG00020004969 ENSOARG00020004948 ##22 SRD5A2 (ENSOARG00020004906) MEMO1 (ENSOARG00020004857) ENSOARG00020004831 SPAST (ENSOARG00020004331) SLC30A6 (ENSOARG00020004173) NLRC4 (ENSOARG00020004057) YIPF4 (ENSOARG00020004030) BIRC6 (ENSOARG00020002705) TTC27 (ENSOARG00020002552) TMOD3 (ENSOARG00020002535) LTBP1 (ENSOARG00020001760) RASGRP3 (ENSOARG00020001625) FAM98A (ENSOARG00020001602) ENSOARG00020001591 ENSOARG00020001574 Goat MODERN SPECIES 11 ICA1L (ENSCHIG00000013077) WDR12 (ENSCHIG00000009469) CARF (ENSCHIG00000023655) ENSCHIG00000016764 NBEAL1 (ENSCHIG00000000921) CYP20A1 (ENSCHIG00000022946) ABI2 (ENSCHIG00000002652) RAPH1 (ENSCHIG00000025930) CD28 (ENSCHIG00000024564) CTLA4 (ENSCHIG00000008042) ICOS (ENSCHIG00000024943) PARD3B (ENSCHIG00000007723) NRP2 (ENSCHIG00000016092) INO80D (ENSCHIG00000010718) NDUFS1 (ENSCHIG00000014971) EEF1B2 (ENSCHIG00000026794) ##22 CMKLR2 (ENSCHIG00000007661) ZDBF2 (ENSCHIG00000022575) ADAM23 (ENSCHIG00000011689) FAM237A (ENSCHIG00000010865) DYTN (ENSCHIG00000016602) MDH1B (ENSCHIG00000022560) FASTKD2 (ENSCHIG00000015121) ENSCHIG00000003872 ENSCHIG00000026347 CPO (ENSCHIG00000020644) KLF7 (ENSCHIG00000006619) CREB1 (ENSCHIG00000027161) METTL21A (ENSCHIG00000003332) ENSCHIG00000011033 FZD5 (ENSCHIG00000007513) Siberian musk deer MODERN SPECIES 352 CD28 (ENSMMSG00000016228) CTLA4 (ENSMMSG00000016291) ICOS (ENSMMSG00000016369) ENSMMSG00000016441 PARD3B (ENSMMSG00000016488) NRP2 (ENSMMSG00000016704) INO80D (ENSMMSG00000016888) NDUFS1 (ENSMMSG00000016943) ENSMMSG00000017130 ##22 ZDBF2 (ENSMMSG00000017183) ADAM23 (ENSMMSG00000017291) FAM237A (ENSMMSG00000017572) DYTN (ENSMMSG00000017587) MDH1B (ENSMMSG00000017649) FASTKD2 (ENSMMSG00000017717) CPO (ENSMMSG00000017798) KLF7 (ENSMMSG00000017874) ENSMMSG00000017910 CREB1 (ENSMMSG00000017935) ENSMMSG00000017981 ENSMMSG00000018078 FZD5 (ENSMMSG00000018190) ENSMMSG00000018199 PLEKHM3 (ENSMMSG00000018216) Pecora ANCESTRAL SPECIES 11 ENSGT00940000156032 ENSGT00940000159344 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00390000010029 ENSGT00390000002457 ENSGT00390000001994 ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.u.a.b ##22 ENSGT00950000182883.a.b.a ENSGT00940000154268.e.b.b.b.b ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 ENSGT00940000159083 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT01010000228879 ENSGT00440000033807 ENSGT00940000154018.b Yarkand deer MODERN SPECIES 9 DLX6 (ENSCHYG00000005122) DLX5 (ENSCHYG00000005150) ENSCHYG00000005190 ENSCHYG00000005224 TAC1 (ENSCHYG00000005255) ENSCHYG00000005370 ASNS (ENSCHYG00000005413) C1GALT1 (ENSCHYG00000005547) COL28A1 (ENSCHYG00000005593) ENSCHYG00000005629 MIOS (ENSCHYG00000005648) RPA3 (ENSCHYG00000005704) ENSCHYG00000005763 ENSCHYG00000005812 ENSCHYG00000005872 ENSCHYG00000006079 ##22 NXPH1 (ENSCHYG00000006108) ENSCHYG00000006128 ENSCHYG00000006144 ENSCHYG00000006164 ENSCHYG00000006195 PHF14 (ENSCHYG00000006312) THSD7A (ENSCHYG00000006932) TMEM106B (ENSCHYG00000006970) ENSCHYG00000007190 SCIN (ENSCHYG00000007252) ARL4A (ENSCHYG00000007375) ENSCHYG00000007388 ETV1 (ENSCHYG00000007428) DGKB (ENSCHYG00000007559) ENSCHYG00000007684 Percora_a ANCESTRAL SPECIES 11 ENSGT00940000156032 ENSGT00940000159344 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00390000010029.a ENSGT00390000002457 ENSGT00390000001994 ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.u.a.b ##22 ENSGT00950000182883.a.b.a ENSGT00940000154268.e.b.b.b.b ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 ENSGT00940000159083 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT01010000228879 ENSGT00440000033807 ENSGT00940000154018.b Bovidae ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.u.a.b ##22 Caprinae ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.u.a.b ##22 Goat MODERN SPECIES 23 SLC25A13 (ENSCHIG00000022398) ENSCHIG00000010410 ENSCHIG00000020492 DLX6 (ENSCHIG00000022329) DLX5 (ENSCHIG00000009075) ENSCHIG00000008860 TAC1 (ENSCHIG00000022845) ENSCHIG00000013950 C1GALT1 (ENSCHIG00000025282) COL28A1 (ENSCHIG00000015742) MIOS (ENSCHIG00000011181) ENSCHIG00000023481 UMAD1 (ENSCHIG00000017252) GLCCI1 (ENSCHIG00000022941) ICA1 (ENSCHIG00000025576) ENSCHIG00000014633 ##22 NXPH1 (ENSCHIG00000010196) ENSCHIG00000008770 ENSCHIG00000013651 ENSCHIG00000014929 PHF14 (ENSCHIG00000027088) THSD7A (ENSCHIG00000009207) ENSCHIG00000022399 TMEM106B (ENSCHIG00000020985) ENSCHIG00000023500 ENSCHIG00000014812 ENSCHIG00000012097 SCIN (ENSCHIG00000014472) ARL4A (ENSCHIG00000011984) ETV1 (ENSCHIG00000012179) DGKB (ENSCHIG00000020976) Pecora ANCESTRAL SPECIES 207 ENSGT00930000152728.a ENSGT00950000183014.f.a.h.u.b ##22 Percora_a ANCESTRAL SPECIES 205 ENSGT00930000152728.a ENSGT00950000183014.f.a.h.u.b ##22 Bovidae ANCESTRAL SPECIES 2 ENSGT00390000002877 ENSGT00390000005338 ENSGT01000000214434.E ENSGT00940000160870 ENSGT00940000158281 ENSGT00390000001189.a ENSGT00390000018151 ENSGT00940000153124.l.b.b ENSGT00940000165283.e ENSGT00940000153124.l.b.a ENSGT00940000153124.l.a.b ENSGT00940000153124.l.a.a ENSGT00940000165283.f ENSGT00940000164198 ENSGT00900000141359 ENSGT00950000183014.f.a.h.u.b ##22 ENSGT00940000163181 ENSGT00940000163303 ENSGT00940000163430 ENSGT00940000162835 ENSGT00940000162945 ENSGT00940000160386.o.a ENSGT00940000161704 ENSGT00900000141057.a.a.b.b ENSGT00900000141057.a.a.b.a ENSGT00900000141057.a.b ENSGT00940000164509 ENSGT00940000160386.o.b ENSGT00940000164752 ENSGT00940000160935 ENSGT00430000031027.b Caprinae ANCESTRAL SPECIES 1 ENSGT00940000160870 ENSGT00940000158281 ENSGT00390000001189.a ENSGT00390000018151 ENSGT00940000153124.l.b.a.d ENSGT00940000165283.e ENSGT00940000153124.l.b.a.c.b.a ENSGT00940000153124.l.b.a.c.b.b ENSGT00940000153124.l.b.a.c.a ENSGT00940000153124.l.a.b ENSGT00940000153124.l.a.a.d.a.a ENSGT00940000153124.l.a.a.c ENSGT00940000165283.f ENSGT00940000153124.l.a.a.d.a.b ENSGT00940000164198 ENSGT00950000183014.f.a.h.u.b ##22 ENSGT00940000163181 ENSGT00940000163303 ENSGT00940000163430 ENSGT00940000162835 ENSGT00940000162945 ENSGT00940000160386.o.a ENSGT00940000161704 ENSGT00900000141057.a.a.b.b ENSGT00900000141057.a.a.b.a ENSGT00900000141057.a.b ENSGT00940000164509 ENSGT00940000160386.o.b ENSGT00940000164752 ENSGT00940000160386.p ENSGT00940000160935 Goat MODERN SPECIES 10 SHPK (ENSCHIG00000023517) TRPV1 (ENSCHIG00000025473) TRPV3 (ENSCHIG00000020752) ASPA (ENSCHIG00000025447) SPATA22 (ENSCHIG00000026957) ENSCHIG00000010281 ENSCHIG00000010131 ENSCHIG00000011370 ENSCHIG00000008307 ENSCHIG00000003399 ENSCHIG00000007591 ENSCHIG00000003152 ENSCHIG00000013095 ENSCHIG00000007705 ENSCHIG00000010285 ENSCHIG00000015293 ##22 ENSCHIG00000011882 ENSCHIG00000025613 ENSCHIG00000006349 OR3A1 (ENSCHIG00000009510) OR3A2 (ENSCHIG00000008885) ENSCHIG00000014019 ENSCHIG00000026452 ENSCHIG00000024744 ENSCHIG00000004325 ENSCHIG00000001169 ENSCHIG00000011338 OR1G1 (ENSCHIG00000011343) ENSCHIG00000008428 ENSCHIG00000009591 RAP1GAP2 (ENSCHIG00000019173) Rambouillet Sheep MODERN SPECIES 2 CTNS (ENSOARG00020017250) SHPK (ENSOARG00020017322) TRPV1 (ENSOARG00020017380) TRPV3 (ENSOARG00020018243) ASPA (ENSOARG00020018690) SPATA22 (ENSOARG00020018789) ENSOARG00020019144 ENSOARG00020019173 ENSOARG00020019190 ENSOARG00020019207 ENSOARG00020019226 ENSOARG00020019249 ENSOARG00020019267 ENSOARG00020019288 ENSOARG00020019305 ENSOARG00020019359 ##22 ENSOARG00020019424 ENSOARG00020019448 OR3A1 (ENSOARG00020019498) OR3A2 (ENSOARG00020019531) OR1P1 (ENSOARG00020019568) ENSOARG00020019598 ENSOARG00020019620 ENSOARG00020019636 ENSOARG00020019705 OR1D5 (ENSOARG00020019722) RAP1GAP2 (ENSOARG00020019798) CCDC92B (ENSOARG00020021201) CLUH (ENSOARG00020021282) ENSOARG00020021830 ENSOARG00020021944 Bovinae ANCESTRAL SPECIES ENSGT00390000002877 ENSGT00390000005338 ENSGT01000000214434.E ENSGT00940000160870 ENSGT00940000158281 ENSGT00390000001189.a ENSGT00390000018151 ENSGT00940000153124.l.b.b ENSGT00940000165283.e ENSGT00940000153124.l.a.b ENSGT00940000153124.l.a.a.a ENSGT00940000153124.l.a.a.b ENSGT00940000165283.f ENSGT00940000164198 ENSGT00900000141359 ENSGT00950000183014.f.a.h.u.b ##22 ENSGT00940000163181 ENSGT00940000163303 ENSGT00940000163430 ENSGT00940000162835 ENSGT00940000162945.i.b ENSGT00940000162945.i.a ENSGT00940000162945.j ENSGT00940000161704 ENSGT00900000141057.a.a.b.b ENSGT00900000141057.a.a.b.a ENSGT00900000141057.a.b ENSGT00940000164509 ENSGT00940000160386.o.b ENSGT00940000164752 ENSGT00940000160935 Bos ANCESTRAL SPECIES 1 ENSGT00390000005338 ENSGT01000000214434.E ENSGT00940000160870 ENSGT00940000158281 ENSGT00390000001189.a ENSGT00390000018151 ENSGT00940000165283.e ENSGT00940000153124.l.b.b ENSGT00940000153124.l.b.a ENSGT00940000153124.l.a.b ENSGT00940000153124.l.a.a.a.b ENSGT00940000153124.l.a.a.a.a ENSGT00940000153124.l.a.a.b ENSGT00940000164198 ENSGT00900000141359 ENSGT00950000183014.f.a.h.u.b ##22 ENSGT00940000163181 ENSGT00940000163303 ENSGT00940000163430 ENSGT00940000162835 ENSGT00940000162945.i.b ENSGT00940000162945.i.a ENSGT00940000162945.j ENSGT00940000161704 ENSGT00900000141057.a.a.b.b ENSGT00900000141057.a.a.b.a ENSGT00900000141057.a.b ENSGT00940000164509 ENSGT00940000160386.o.b ENSGT00940000164752 ENSGT00940000160935 Bos_a ANCESTRAL SPECIES ENSGT00390000005338 ENSGT01000000214434.E ENSGT00940000160870 ENSGT00940000158281 ENSGT00390000001189.a ENSGT00390000018151 ENSGT00940000165283.e ENSGT00940000153124.l.b.b ENSGT00940000153124.l.b.a ENSGT00940000153124.l.a.b ENSGT00940000165283.f ENSGT00940000153124.l.a.a.a.b ENSGT00940000153124.l.a.a.a.a ENSGT00940000153124.l.a.a.b ENSGT00940000164198 ENSGT00950000183014.f.a.h.u.b ##22 ENSGT00940000163181 ENSGT00940000163303 ENSGT00940000163430 ENSGT00940000162835 ENSGT00940000162945.i.a ENSGT00940000162945.j ENSGT00940000161704 ENSGT00900000141057.a.a.b.b ENSGT00900000141057.a.a.b.a ENSGT00900000141057.a.b ENSGT00940000164509 ENSGT00940000160386.o.b ENSGT00940000164752 ENSGT00940000160935 ENSGT00430000031027.b Domestic yak MODERN SPECIES 10 P2RX5 (ENSBGRG00000021231) ENSBGRG00000021314 ENSBGRG00000021320 TAX1BP3 (ENSBGRG00000021332) CTNS (ENSBGRG00000021392) SHPK (ENSBGRG00000021487) TRPV1 (ENSBGRG00000021585) TRPV3 (ENSBGRG00000022062) ASPA (ENSBGRG00000022120) SPATA22 (ENSBGRG00000022199) ENSBGRG00000022327 ENSBGRG00000022369 ENSBGRG00000022395 ENSBGRG00000022412 ENSBGRG00000022433 ENSBGRG00000022482 ##22 ENSBGRG00000022499 ENSBGRG00000022503 ENSBGRG00000022518 OR3A1 (ENSBGRG00000022536) ENSBGRG00000022580 ENSBGRG00000022593 ENSBGRG00000022605 ENSBGRG00000022624 ENSBGRG00000022638 ENSBGRG00000022652 ENSBGRG00000022664 OR1G1 (ENSBGRG00000022669) OR1D5 (ENSBGRG00000022702) RAP1GAP2 (ENSBGRG00000022729) CCDC92B (ENSBGRG00000022823) Siberian musk deer MODERN SPECIES 1135 P2RX5 (ENSMMSG00000010057) EMC6 (ENSMMSG00000010010) TAX1BP3 (ENSMMSG00000009955) CTNS (ENSMMSG00000009905) SHPK (ENSMMSG00000009877) TRPV1 (ENSMMSG00000009529) TRPV3 (ENSMMSG00000009180) ASPA (ENSMMSG00000009125) ENSMMSG00000009110 ENSMMSG00000009074 ENSMMSG00000009057 ENSMMSG00000009041 ENSMMSG00000009026 ENSMMSG00000009010 ENSMMSG00000008960 ENSMMSG00000008938 ##22 ENSMMSG00000008922 ENSMMSG00000008913 OR3A1 (ENSMMSG00000008893) OR3A2 (ENSMMSG00000008876) ENSMMSG00000008853 ENSMMSG00000008837 ENSMMSG00000008821 ENSMMSG00000008810 OR1G1 (ENSMMSG00000008796) ENSMMSG00000008786 ENSMMSG00000008778 ENSMMSG00000008767 OR1D5 (ENSMMSG00000008756) RAP1GAP2 (ENSMMSG00000007699) CLUH (ENSMMSG00000007430) Pecora ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.v ##22 Percora_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.v ##22 Bovidae ANCESTRAL SPECIES 12 ENSGT00940000162732 ENSGT00960000191016 ENSGT00940000163409 ENSGT00940000157683 ENSGT00940000159188 ENSGT00390000010029.a ENSGT00390000002457 ENSGT00390000001994 ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.v ##22 ENSGT00950000182883.a.b.a ENSGT00940000154268.f ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 ENSGT00940000159083 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT01010000228879 ENSGT00440000033807 ENSGT00940000154018.b Caprinae ANCESTRAL SPECIES 10 ENSGT00940000162732 ENSGT00960000191016 ENSGT00940000163409 ENSGT00940000157683 ENSGT00940000159188 ENSGT00390000010029.a ENSGT00390000002457 ENSGT00390000001994.q ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029.a ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.v ##22 ENSGT00950000182883.a.b.a ENSGT00940000154268.e.b.b.a.b ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT01010000228879 ENSGT00440000033807 ENSGT00940000154018.b ENSGT00390000006412 Rambouillet Sheep MODERN SPECIES 20 SLC25A13 (ENSOARG00020021619) SEM1 (ENSOARG00020021699) ENSOARG00020021764 DLX6 (ENSOARG00020021810) DLX5 (ENSOARG00020021833) SDHAF3 (ENSOARG00020000120) TAC1 (ENSOARG00020000198) ASNS (ENSOARG00020000318) C1GALT1 (ENSOARG00020000380) COL28A1 (ENSOARG00020000523) MIOS (ENSOARG00020000878) ENSOARG00020000903 UMAD1 (ENSOARG00020000913) GLCCI1 (ENSOARG00020000930) ICA1 (ENSOARG00020001005) ENSOARG00020001186 ##22 NXPH1 (ENSOARG00020001196) ENSOARG00020001210 NDUFA4 (ENSOARG00020001248) PHF14 (ENSOARG00020001319) THSD7A (ENSOARG00020001568) TMEM106B (ENSOARG00020001680) ENSOARG00020001715 ENSOARG00020001736 SCIN (ENSOARG00020001751) ARL4A (ENSOARG00020001774) ETV1 (ENSOARG00020001782) ENSOARG00020001805 ENSOARG00020001821 ENSOARG00020001861 AGMO (ENSOARG00020001908) Bovinae ANCESTRAL SPECIES 8 ENSGT00390000018085.a.b.a ENSGT00940000162732 ENSGT00960000191016 ENSGT00940000157683 ENSGT00940000159188 ENSGT00390000010029.a.a ENSGT00390000002457 ENSGT00390000001994 ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.v ##22 ENSGT00950000182883.a.b.a ENSGT00940000154268.e.b.b.a ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT01100000263477.F ENSGT00850000133584 ENSGT00940000159083 ENSGT01100000263514.B.m.a.a.a.b ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT00440000033807 ENSGT00940000154018.b ENSGT00960000192577 American bison MODERN SPECIES 3371 ENSBBBG00000024315 ENSBBBG00000024310 ENSBBBG00000006330 TRAV26-2 (ENSBBBG00000024297) ENSBBBG00000024291 ENSBBBG00000024285 ENSBBBG00000024277 ENSBBBG00000024222 ENSBBBG00000024219 ENSBBBG00000008989 ENSBBBG00000024211 ENSBBBG00000024207 ENSBBBG00000006296 DAD1 (ENSBBBG00000024198) ABHD4 (ENSBBBG00000008871) ENSBBBG00000024178 ##22 ENSBBBG00000024170 ENSBBBG00000008646 ##22 ENSBBBG00000024153 ENSBBBG00000008981 ENSBBBG00000024137 ENSBBBG00000024134 OXA1L (ENSBBBG00000024118) SLC7A7 (ENSBBBG00000024018) MRPL52 (ENSBBBG00000023959) MMP14 (ENSBBBG00000023905) LRP10 (ENSBBBG00000000301) REM2 (ENSBBBG00000008315) RBM23 (ENSBBBG00000006214) PRMT5 (ENSBBBG00000023731) HAUS4 (ENSBBBG00000023502) Bos ANCESTRAL SPECIES 8 ENSGT00940000159344 ENSGT00390000018085.a.b.a ENSGT00960000191016 ENSGT00940000157683 ENSGT00940000159188 ENSGT00390000010029.a.a ENSGT00390000002457 ENSGT00390000001994 ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.v ##22 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182883.a.b.a ENSGT00390000015564.s.b ENSGT00940000154268.e.b.b.a ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT01100000263477.F ENSGT00850000133584 ENSGT00940000159083 ENSGT01100000263514.B.m.a.a.a.b ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT00440000033807.i Bos_a ANCESTRAL SPECIES ENSGT00950000183014.f.a.h.v ##22 Wild yak MODERN SPECIES 193 ENSBMUG00000003064 ##22 NXT1 (ENSBMUG00000003048) GZF1 (ENSBMUG00000003030) NAPB (ENSBMUG00000003001) CSTL1 (ENSBMUG00000002921) ENSBMUG00000002901 ENSBMUG00000002881 CST8 (ENSBMUG00000002869) ENSBMUG00000002852 ENSBMUG00000002841 CST3 (ENSBMUG00000002832) Bos_b ANCESTRAL SPECIES 7 ENSGT00940000154466.t ENSGT00960000191016 ENSGT00940000157683 ENSGT00940000159188 ENSGT01090000260575 ENSGT00940000164236.a.b ENSGT00390000002457 ENSGT00390000001994 ENSGT00940000155000 ENSGT00940000161647 ENSGT00390000015038 ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b ENSGT00390000005530.a.b ENSGT00950000183014.f.a.h.v ##22 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182883.a.b.a ENSGT00390000015564.s.b ENSGT00940000154268.e.b.b.a ENSGT00940000156923 ENSGT00940000155427 ENSGT00940000158360 ENSGT01100000263477.F ENSGT00940000159083 ENSGT01100000263514.B.m.a.a.a.b ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT00440000033807.i ENSGT00940000154018.b Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005016193 DLX6 (ENSBIXG00005016210) DLX5 (ENSBIXG00005016234) ENSBIXG00005016248 ENSBIXG00005016262 ENSBIXG00005016310 ASNS (ENSBIXG00005016374) ENSBIXG00005016397 C1GALT1 (ENSBIXG00005016418) COL28A1 (ENSBIXG00005016589) MIOS (ENSBIXG00005016685) RPA3 (ENSBIXG00005016720) UMAD1 (ENSBIXG00005005510) GLCCI1 (ENSBIXG00005016804) ICA1 (ENSBIXG00005016867) ENSBIXG00005016894 ##22 NXPH1 (ENSBIXG00005016983) ENSBIXG00005017011 ENSBIXG00005017031 ENSBIXG00005017089 PHF14 (ENSBIXG00005006867) THSD7A (ENSBIXG00005017371) TMEM106B (ENSBIXG00005017459) ENSBIXG00005017487 ENSBIXG00005017514 SCIN (ENSBIXG00005017553) ENSBIXG00005017580 ARL4A (ENSBIXG00005017612) ETV1 (ENSBIXG00005002920) ENSBIXG00005018043 DGKB (ENSBIXG00005018128) Camelidae ANCESTRAL SPECIES 58 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Arabian camel MODERN SPECIES 31 ENSCDRG00005019289 ENSCDRG00005019283 ICA1L (ENSCDRG00005019255) WDR12 (ENSCDRG00005019221) CARF (ENSCDRG00005019098) NBEAL1 (ENSCDRG00005019031) ABI2 (ENSCDRG00005018744) ENSCDRG00005018577 CD28 (ENSCDRG00005018484) CTLA4 (ENSCDRG00005018448) ICOS (ENSCDRG00005018420) PARD3B (ENSCDRG00005018074) NRP2 (ENSCDRG00005017938) INO80D (ENSCDRG00005017847) NDUFS1 (ENSCDRG00005017509) EEF1B2 (ENSCDRG00005017418) ##22 CMKLR2 (ENSCDRG00005017405) ZDBF2 (ENSCDRG00005017378) ADAM23 (ENSCDRG00005016801) FAM237A (ENSCDRG00005016730) DYTN (ENSCDRG00005016665) MDH1B (ENSCDRG00005016545) FASTKD2 (ENSCDRG00005016506) CPO (ENSCDRG00005016423) KLF7 (ENSCDRG00005016375) CREB1 (ENSCDRG00005016249) METTL21A (ENSCDRG00005016143) ENSCDRG00005016106 FZD5 (ENSCDRG00005016088) PLEKHM3 (ENSCDRG00005016026) ENSCDRG00005015995 Alpaca MODERN SPECIES 2553 INO80D (ENSVPAG00000001342) NDUFS1 (ENSVPAG00000001346) ENSVPAG00000001352 ##22 Suina ANCESTRAL SPECIES 3 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 Chacoan peccary MODERN SPECIES 91 ICA1L (ENSCWAG00000017108) WDR12 (ENSCWAG00000017209) CARF (ENSCWAG00000017264) NBEAL1 (ENSCWAG00000017563) CYP20A1 (ENSCWAG00000017608) ABI2 (ENSCWAG00000017671) RAPH1 (ENSCWAG00000018090) CD28 (ENSCWAG00000020352) CTLA4 (ENSCWAG00000020380) ICOS (ENSCWAG00000020408) PARD3B (ENSCWAG00000020460) NRP2 (ENSCWAG00000020581) INO80D (ENSCWAG00000020612) ENSCWAG00000020619 NDUFS1 (ENSCWAG00000020647) EEF1B2 (ENSCWAG00000020782) ##22 CMKLR2 (ENSCWAG00000020796) ENSCWAG00000020804 ENSCWAG00000020821 Pig DUPLICATION Pig MODERN SPECIES 6 ICA1L (ENSSSCG00000016115) WDR12 (ENSSSCG00000016116) CARF (ENSSSCG00000016117) NBEAL1 (ENSSSCG00000016118) CYP20A1 (ENSSSCG00000055761) ABI2 (ENSSSCG00000034630) ENSSSCG00000016119 CD28 (ENSSSCG00000028561) CTLA4 (ENSSSCG00000016122) ICOS (ENSSSCG00000025042) PARD3B (ENSSSCG00000016123) ENSSSCG00000055400 NRP2 (ENSSSCG00000026383) INO80D (ENSSSCG00000016125) NDUFS1 (ENSSSCG00000016127) EEF1B2 (ENSSSCG00000016128) ##22 CMKLR2 (ENSSSCG00000016129) ZDBF2 (ENSSSCG00000016130) ADAM23 (ENSSSCG00000016131) FAM237A (ENSSSCG00000036691) DYTN (ENSSSCG00000035158) MDH1B (ENSSSCG00000016133) FASTKD2 (ENSSSCG00000016134) CPO (ENSSSCG00000016135) KLF7 (ENSSSCG00000029998) ENSSSCG00000042730 CREB1 (ENSSSCG00000034395) METTL21A (ENSSSCG00000036466) ENSSSCG00000024696 FZD5 (ENSSSCG00000016140) PLEKHM3 (ENSSSCG00000016141) Pig MODERN SPECIES 12 TRMT13 (ENSSSCG00000006869) SASS6 (ENSSSCG00000028821) MFSD14A (ENSSSCG00000006870) SLC35A3 (ENSSSCG00000006871) AGL (ENSSSCG00000006872) FRRS1 (ENSSSCG00000006873) PALMD (ENSSSCG00000006874) PLPPR4 (ENSSSCG00000006875) PLPPR5 (ENSSSCG00000006876) SNX7 (ENSSSCG00000006877) DPYD (ENSSSCG00000006878) ENSSSCG00000041339 ENSSSCG00000050401 ENSSSCG00000041080 PTBP2 (ENSSSCG00000006879) ENSSSCG00000006881 ##22 ENSSSCG00000047388 RWDD3 (ENSSSCG00000036509) TLCD4 (ENSSSCG00000039854) ALG14 (ENSSSCG00000006885) CNN3 (ENSSSCG00000006887) SLC44A3 (ENSSSCG00000006888) F3 (ENSSSCG00000022447) ABCD3 (ENSSSCG00000028620) ARHGAP29 (ENSSSCG00000006889) ABCA4 (ENSSSCG00000006890) GCLM (ENSSSCG00000037549) DNTTIP2 (ENSSSCG00000006892) BCAR3 (ENSSSCG00000006893) FNBP1L (ENSSSCG00000006894) DR1 (ENSSSCG00000028310) Atlantogenata ANCESTRAL SPECIES 9 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000154453.b.a.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b Afrotheria ANCESTRAL SPECIES 1 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232.h.a ENSGT00390000004840 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00950000183046.a.a ENSGT00390000005530.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000159232.h.a ENSGT00390000004840 Elephant MODERN SPECIES 301 ABI2 (ENSLAFG00000015117) ENSLAFG00000015135 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) CTLA4 (ENSLAFG00000006654) ICOS (ENSLAFG00000006657) ENSLAFG00000026263 ENSLAFG00000030813 ENSLAFG00000007708 ENSLAFG00000026835 ENSLAFG00000025673 ENSLAFG00000030808 NRP2 (ENSLAFG00000016414) INO80D (ENSLAFG00000015352) NDUFS1 (ENSLAFG00000013782) EEF1B2 (ENSLAFG00000011812) ##22 CMKLR2 (ENSLAFG00000009005) ZDBF2 (ENSLAFG00000014253) ADAM23 (ENSLAFG00000014452) DYTN (ENSLAFG00000032161) MDH1B (ENSLAFG00000015578) FASTKD2 (ENSLAFG00000005198) CPO (ENSLAFG00000009772) KLF7 (ENSLAFG00000005822) CREB1 (ENSLAFG00000013257) METTL21A (ENSLAFG00000017103) ENSLAFG00000021558 FZD5 (ENSLAFG00000017105) PLEKHM3 (ENSLAFG00000030211) ENSLAFG00000016869 ENSLAFG00000016874 Hyrax MODERN SPECIES 1246 NDUFS1 (ENSPCAG00000013243) EEF1B2 (ENSPCAG00000013348) ##22 Xenarthra ANCESTRAL SPECIES 1480 ENSGT00940000153514.b ENSGT00950000183014.f.a.h ##22 ENSGT00940000160642 Armadillo DUPLICATION Armadillo DUPLICATION Armadillo DUPLICATION Armadillo MODERN SPECIES 1174 NDUFS1 (ENSDNOG00000006390) ENSDNOG00000000073 ##22 CMKLR2 (ENSDNOG00000006408) ENSDNOG00000019224 Armadillo MODERN SPECIES 4552 ENSDNOG00000034500 SETBP1 (ENSDNOG00000001211) ENSDNOG00000044008 ENSDNOG00000011787 ##22 Armadillo MODERN SPECIES 1936 ENSDNOG00000047747 ENSDNOG00000035212 ##22 ENSDNOG00000030636 ENSDNOG00000011903 Armadillo MODERN SPECIES 1454 ST8SIA4 (ENSDNOG00000046147) ENSDNOG00000040306 SMARCA2 (ENSDNOG00000006402) VLDLR (ENSDNOG00000001086) KCNV2 (ENSDNOG00000041737) PUM3 (ENSDNOG00000008157) RFX3 (ENSDNOG00000018668) ENSDNOG00000012636 ENSDNOG00000042655 ENSDNOG00000035748 ENSDNOG00000042157 ##22 SLC1A1 (ENSDNOG00000001798) SPATA6L (ENSDNOG00000038916) PLPP6 (ENSDNOG00000015974) CDC37L1 (ENSDNOG00000015975) AK3 (ENSDNOG00000038787) RCL1 (ENSDNOG00000019911) JAK2 (ENSDNOG00000008173) ENSDNOG00000001668 ENSDNOG00000036090 ENSDNOG00000042926 CD274 (ENSDNOG00000018655) PDCD1LG2 (ENSDNOG00000031933) ENSDNOG00000036232 ENSDNOG00000034768 RIC1 (ENSDNOG00000042438) Sloth MODERN SPECIES 1379 NDUFS1 (ENSCHOG00000013807) EEF1B2 (ENSCHOG00000013835) ##22 CMKLR2 (ENSCHOG00000013838) Sauria ANCESTRAL SPECIES 32 ENSGT00390000013916 ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00940000163494.a.b.g.b Archelosauria ANCESTRAL SPECIES 8 ENSGT00390000003964.b ENSGT00950000185065 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Cryptodira ANCESTRAL SPECIES 5 ENSGT00390000013916 ENSGT00950000185065 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00390000013916 ENSGT00950000185065 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Testudinidae ANCESTRAL SPECIES 8 ENSGT00950000185065 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Goode s thornscrub tortoise MODERN SPECIES 2 ENSGEVG00005011079 NBEAL1 (ENSGEVG00005007841) ENSGEVG00005007312 CYP20A1 (ENSGEVG00005007271) ENSGEVG00005007253 ABI2 (ENSGEVG00005007221) RAPH1 (ENSGEVG00005007171) CD28 (ENSGEVG00005007000) CTLA4 (ENSGEVG00005006968) ICOS (ENSGEVG00005006946) PARD3B (ENSGEVG00005006583) ENSGEVG00005006463 NRP2 (ENSGEVG00005006393) INO80D (ENSGEVG00005006347) NDUFS1 (ENSGEVG00005006314) EEF1B2 (ENSGEVG00005006284) ##22 CMKLR2 (ENSGEVG00005006269) ENSGEVG00005006255 ADAM23 (ENSGEVG00005006163) FAM237A (ENSGEVG00005006142) DYTN (ENSGEVG00005006111) MDH1B (ENSGEVG00005006096) FASTKD2 (ENSGEVG00005006068) CPO (ENSGEVG00005005978) KLF7 (ENSGEVG00005005958) CREB1 (ENSGEVG00005005883) METTL21A (ENSGEVG00005005862) ENSGEVG00005005842 ENSGEVG00005005818 PLEKHM3 (ENSGEVG00005005792) ENSGEVG00005005756 Abingdon island giant tortoise MODERN SPECIES 668 ENSCABG00000003073 NRP2 (ENSCABG00000003082) INO80D (ENSCABG00000003095) NDUFS1 (ENSCABG00000003121) EEF1B2 (ENSCABG00000003323) ##22 ENSCABG00000003325 CMKLR2 (ENSCABG00000003336) Emydidae ANCESTRAL SPECIES 4 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00950000185065 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00940000163494.a.b.g.b Three-toed box turtle MODERN SPECIES 25 ICA1L (ENSTMTG00000011077) WDR12 (ENSTMTG00000011113) CARF (ENSTMTG00000011136) ENSTMTG00000011258 NBEAL1 (ENSTMTG00000011535) ENSTMTG00000000064 ABI2 (ENSTMTG00000000124) RAPH1 (ENSTMTG00000000330) CD28 (ENSTMTG00000000707) CTLA4 (ENSTMTG00000000717) ICOS (ENSTMTG00000000728) PARD3B (ENSTMTG00000000749) NRP2 (ENSTMTG00000000762) INO80D (ENSTMTG00000000797) NDUFS1 (ENSTMTG00000000828) EEF1B2 (ENSTMTG00000000857) ##22 CMKLR2 (ENSTMTG00000000886) ADAM23 (ENSTMTG00000000910) FAM237A (ENSTMTG00000000963) DYTN (ENSTMTG00000000982) MDH1B (ENSTMTG00000001002) FASTKD2 (ENSTMTG00000001072) CPO (ENSTMTG00000001098) KLF7 (ENSTMTG00000001122) CREB1 (ENSTMTG00000001136) METTL21A (ENSTMTG00000001153) ENSTMTG00000001162 ENSTMTG00000001184 PLEKHM3 (ENSTMTG00000001191) ENSTMTG00000001219 ENSTMTG00000001256 painted turtle MODERN SPECIES 805 ENSCPBG00000015084 STK32A (ENSCPBG00000018970) ENSCPBG00000019076 ENSCPBG00000019086 NRP2 (ENSCPBG00000019110) INO80D (ENSCPBG00000019181) NDUFS1 (ENSCPBG00000019234) EEF1B2 (ENSCPBG00000019285) ##22 ENSCPBG00000019321 CMKLR2 (ENSCPBG00000019397) ADAM23 (ENSCPBG00000019586) FAM237A (ENSCPBG00000020040) DYTN (ENSCPBG00000020053) MDH1B (ENSCPBG00000020070) FASTKD2 (ENSCPBG00000020108) CPO (ENSCPBG00000020174) KLF7 (ENSCPBG00000020188) CREB1 (ENSCPBG00000020191) METTL21A (ENSCPBG00000020196) ENSCPBG00000020210 ENSCPBG00000020270 PLEKHM3 (ENSCPBG00000020373) ENSCPBG00000020472 Chinese turtle MODERN SPECIES 1524 ENSPSIG00000001658 INO80D (ENSPSIG00000015512) ENSPSIG00000015732 EEF1B2 (ENSPSIG00000016994) ##22 CMKLR2 (ENSPSIG00000001662) ENSPSIG00000017017 ENSPSIG00000001667 ADAM23 (ENSPSIG00000017026) DYTN (ENSPSIG00000017788) MDH1B (ENSPSIG00000017813) FASTKD2 (ENSPSIG00000017841) CPO (ENSPSIG00000017869) KLF7 (ENSPSIG00000005254) CREB1 (ENSPSIG00000005343) ENSPSIG00000005475 METTL21A (ENSPSIG00000005482) ENSPSIG00000005491 ENSPSIG00000005504 PLEKHM3 (ENSPSIG00000005544) Archosauria ANCESTRAL SPECIES 6 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00950000185065 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Aves ANCESTRAL SPECIES 8 ENSGT00390000004840 ENSGT00940000159232 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Neognathae ANCESTRAL SPECIES 6 ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 Japanese quail MODERN SPECIES 25 MDH1B (ENSCJPG00005015360) ADAM23 (ENSCJPG00005015363) CMKLR2 (ENSCJPG00005015367) RAPH1 (ENSCJPG00005015370) ENSCJPG00005015375 CD28 (ENSCJPG00005015378) CTLA4 (ENSCJPG00005015379) ICOS (ENSCJPG00005015381) PARD3B (ENSCJPG00005015409) ENSCJPG00005015846 ENSCJPG00005015847 ENSCJPG00005015848 NRP2 (ENSCJPG00005015851) INO80D (ENSCJPG00005015857) NDUFS1 (ENSCJPG00005015858) EEF1B2 (ENSCJPG00005015859) ##22 ABI2 (ENSCJPG00005015864) CYP20A1 (ENSCJPG00005015897) ENSCJPG00005015898 NBEAL1 (ENSCJPG00005015909) ENSCJPG00005016282 IDH1 (ENSCJPG00005016283) PIKFYVE (ENSCJPG00005016284) DNAJC10 (ENSCJPG00005016431) PDE1A (ENSCJPG00005016432) PPP1R1C (ENSCJPG00005016722) ITPRID2 (ENSCJPG00005016723) NEUROD1 (ENSCJPG00005016724) CERKL (ENSCJPG00005016733) ITGA4 (ENSCJPG00005016736) UBE2E3 (ENSCJPG00005017308) Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 Chicken MODERN SPECIES 36 PIKFYVE (ENSGALG00010022245) IDH1 (ENSGALG00010022213) ENSGALG00010022181 NBEAL1 (ENSGALG00010022149) ENSGALG00010022124 CYP20A1 (ENSGALG00010022116) ABI2 (ENSGALG00010022079) RAPH1 (ENSGALG00010022033) CD28 (ENSGALG00010021995) CTLA4 (ENSGALG00010021983) ICOS (ENSGALG00010021971) PARD3B (ENSGALG00010021734) NRP2 (ENSGALG00010026008) INO80D (ENSGALG00010025994) NDUFS1 (ENSGALG00010025984) EEF1B2 (ENSGALG00010025974) ##22 GPR1 (ENSGALG00010025960) ENSGALG00010025836 ADAM23 (ENSGALG00010026825) FAM237A (ENSGALG00010025900) DYTN (ENSGALG00010025894) MDH1B (ENSGALG00010025874) FASTKD2 (ENSGALG00010025869) CPO (ENSGALG00010025855) KLF7 (ENSGALG00010025822) CREB1 (ENSGALG00010025351) METTL21A (ENSGALG00010025340) FZD5 (ENSGALG00010025333) PLEKHM3 (ENSGALG00010025312) CARF (ENSGALG00010025262) WDR12 (ENSGALG00010025233) Turkey MODERN SPECIES 27 ENSMGAG00000008920 ENSMGAG00000008985 ENSMGAG00000019768 NBEAL1 (ENSMGAG00000008870) ENSMGAG00000019797 CYP20A1 (ENSMGAG00000008831) ABI2 (ENSMGAG00000008821) RAPH1 (ENSMGAG00000008794) CD28 (ENSMGAG00000008783) CTLA4 (ENSMGAG00000008759) ICOS (ENSMGAG00000008751) ENSMGAG00000021009 PARD3B (ENSMGAG00000008728) INO80D (ENSMGAG00000008621) NDUFS1 (ENSMGAG00000008573) EEF1B2 (ENSMGAG00000008548) ##22 CMKLR2 (ENSMGAG00000016159) ADAM23 (ENSMGAG00000008433) FAM237A (ENSMGAG00000020531) MDH1B (ENSMGAG00000008532) FASTKD2 (ENSMGAG00000008516) CPO (ENSMGAG00000008430) KLF7 (ENSMGAG00000008396) CREB1 (ENSMGAG00000008360) METTL21A (ENSMGAG00000008350) ENSMGAG00000008327 ENSMGAG00000016153 PLEKHM3 (ENSMGAG00000008315) CARF (ENSMGAG00000008291) WDR12 (ENSMGAG00000008240) FAM117B (ENSMGAG00000008139) Anatidae ANCESTRAL SPECIES 10 ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408.b ENSGT00940000157249 ENSGT00940000154453.b.d ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 ENSGT00930000150950.b ENSGT00950000183046.a.a Duck MODERN SPECIES 25 ENSAPLG00000024504 ENSAPLG00000017302 ENSAPLG00000027901 ENSAPLG00000025723 ENSAPLG00000025132 CYP20A1 (ENSAPLG00000015942) ABI2 (ENSAPLG00000016216) RAPH1 (ENSAPLG00000000860) CD28 (ENSAPLG00000001723) CTLA4 (ENSAPLG00000001966) ICOS (ENSAPLG00000002410) PARD3B (ENSAPLG00000002583) NRP2 (ENSAPLG00000002735) INO80D (ENSAPLG00000004131) NDUFS1 (ENSAPLG00000004262) EEF1B2 (ENSAPLG00000004841) ##22 CMKLR2 (ENSAPLG00000001630) ADAM23 (ENSAPLG00000005205) FAM237A (ENSAPLG00000005882) ENSAPLG00000005888 MDH1B (ENSAPLG00000006087) FASTKD2 (ENSAPLG00000006177) CPO (ENSAPLG00000006729) KLF7 (ENSAPLG00000006752) CREB1 (ENSAPLG00000006786) METTL21A (ENSAPLG00000007133) ENSAPLG00000007167 ENSAPLG00000001632 PLEKHM3 (ENSAPLG00000007354) CARF (ENSAPLG00000007561) WDR12 (ENSAPLG00000007646) Pink-footed goose MODERN SPECIES 120 ABI2 (ENSABRG00000018029) RAPH1 (ENSABRG00000018013) CD28 (ENSABRG00000018006) CTLA4 (ENSABRG00000018000) ICOS (ENSABRG00000017991) PARD3B (ENSABRG00000017834) NRP2 (ENSABRG00000017280) INO80D (ENSABRG00000017222) NDUFS1 (ENSABRG00000017107) EEF1B2 (ENSABRG00000017085) ##22 CMKLR2 (ENSABRG00000017081) ADAM23 (ENSABRG00000016867) FAM237A (ENSABRG00000016843) MDH1B (ENSABRG00000016828) FASTKD2 (ENSABRG00000016816) CPO (ENSABRG00000016806) KLF7 (ENSABRG00000016797) CREB1 (ENSABRG00000016788) ENSABRG00000016786 ENSABRG00000016702 ENSABRG00000016686 PLEKHM3 (ENSABRG00000016681) CARF (ENSABRG00000016665) WDR12 (ENSABRG00000016630) FAM117B (ENSABRG00000016605) Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 Golden eagle MODERN SPECIES 22 ENSACCG00020002387 ENSACCG00020002374 ENSACCG00020002359 NBEAL1 (ENSACCG00020001867) ENSACCG00020001270 CYP20A1 (ENSACCG00020001252) ABI2 (ENSACCG00020001210) RAPH1 (ENSACCG00020001057) CD28 (ENSACCG00020000853) CTLA4 (ENSACCG00020000823) ICOS (ENSACCG00020000759) PARD3B (ENSACCG00020000685) NRP2 (ENSACCG00020000561) INO80D (ENSACCG00020000521) NDUFS1 (ENSACCG00020000486) EEF1B2 (ENSACCG00020000452) ##22 CMKLR2 (ENSACCG00020000445) ADAM23 (ENSACCG00020000416) FAM237A (ENSACCG00020000352) DYTN (ENSACCG00020000333) MDH1B (ENSACCG00020000316) FASTKD2 (ENSACCG00020003396) CPO (ENSACCG00020003371) KLF7 (ENSACCG00020003351) CREB1 (ENSACCG00020003332) METTL21A (ENSACCG00020003321) ENSACCG00020003303 ENSACCG00020003288 PLEKHM3 (ENSACCG00020003252) CARF (ENSACCG00020003224) WDR12 (ENSACCG00020003209) Kakapo MODERN SPECIES 22 ENSSHBG00005005104 C2orf80 (ENSSHBG00005005096) ENSSHBG00005005091 NBEAL1 (ENSSHBG00005003608) ENSSHBG00005002906 CYP20A1 (ENSSHBG00005002889) ABI2 (ENSSHBG00005002858) RAPH1 (ENSSHBG00005002809) CTLA4 (ENSSHBG00005002762) ICOS (ENSSHBG00005002727) PARD3B (ENSSHBG00005002706) ENSSHBG00005002675 NRP2 (ENSSHBG00005002621) INO80D (ENSSHBG00005002582) NDUFS1 (ENSSHBG00005002546) EEF1B2 (ENSSHBG00005002514) ##22 CMKLR2 (ENSSHBG00005002504) ENSSHBG00005002492 ADAM23 (ENSSHBG00005002434) FAM237A (ENSSHBG00005002374) MDH1B (ENSSHBG00005002354) FASTKD2 (ENSSHBG00005002335) CPO (ENSSHBG00005002311) KLF7 (ENSSHBG00005002296) CREB1 (ENSSHBG00005002287) METTL21A (ENSSHBG00005002278) ENSSHBG00005002269 ENSSHBG00005002253 PLEKHM3 (ENSSHBG00005002232) CARF (ENSSHBG00005002136) WDR12 (ENSSHBG00005002114) Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 Great tit MODERN SPECIES 27 PIKFYVE (ENSPMJG00000018335) IDH1 (ENSPMJG00000018333) ENSPMJG00000018332 NBEAL1 (ENSPMJG00000018330) ENSPMJG00000018329 CYP20A1 (ENSPMJG00000018328) ABI2 (ENSPMJG00000018327) RAPH1 (ENSPMJG00000018308) CD28 (ENSPMJG00000018298) CTLA4 (ENSPMJG00000018297) ICOS (ENSPMJG00000018295) PARD3B (ENSPMJG00000018290) NRP2 (ENSPMJG00000018287) INO80D (ENSPMJG00000018285) NDUFS1 (ENSPMJG00000018281) EEF1B2 (ENSPMJG00000018274) ##22 CMKLR2 (ENSPMJG00000018273) ADAM23 (ENSPMJG00000018267) FAM237A (ENSPMJG00000018264) DYTN (ENSPMJG00000018263) MDH1B (ENSPMJG00000018262) FASTKD2 (ENSPMJG00000018261) CPO (ENSPMJG00000018259) KLF7 (ENSPMJG00000018257) CREB1 (ENSPMJG00000018256) METTL21A (ENSPMJG00000018255) ENSPMJG00000018252 ENSPMJG00000018250 PLEKHM3 (ENSPMJG00000018247) CARF (ENSPMJG00000018244) WDR12 (ENSPMJG00000018243) Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000161191.B ENSGT00940000159743 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000162639 ENSGT00940000161191.B ENSGT00940000159743 Medium ground finch MODERN SPECIES 1 IDH1 (ENSGFOG00000004936) ENSGFOG00000004948 NBEAL1 (ENSGFOG00000005037) ENSGFOG00000006136 CYP20A1 (ENSGFOG00000006144) ABI2 (ENSGFOG00000006158) RAPH1 (ENSGFOG00000006191) CD28 (ENSGFOG00000006204) CTLA4 (ENSGFOG00000006210) ICOS (ENSGFOG00000006216) ENSGFOG00000006219 PARD3B (ENSGFOG00000006247) NRP2 (ENSGFOG00000006567) INO80D (ENSGFOG00000006596) NDUFS1 (ENSGFOG00000006610) EEF1B2 (ENSGFOG00000006636) ##22 ENSGFOG00000006645 CMKLR2 (ENSGFOG00000006655) ADAM23 (ENSGFOG00000006668) FAM237A (ENSGFOG00000006747) DYTN (ENSGFOG00000006753) MDH1B (ENSGFOG00000006762) FASTKD2 (ENSGFOG00000006769) CPO (ENSGFOG00000006781) KLF7 (ENSGFOG00000006789) CREB1 (ENSGFOG00000006794) METTL21A (ENSGFOG00000006799) ENSGFOG00000006802 FZD5 (ENSGFOG00000006809) PLEKHM3 (ENSGFOG00000006814) CARF (ENSGFOG00000006822) Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000013916 ENSGT00930000150950.b Zebra finch MODERN SPECIES 29 IDH1 (ENSTGUG00000023800) ENSTGUG00000018851 NBEAL1 (ENSTGUG00000029141) ENSTGUG00000025723 CYP20A1 (ENSTGUG00000009709) ABI2 (ENSTGUG00000009728) RAPH1 (ENSTGUG00000009747) CD28 (ENSTGUG00000016732) CTLA4 (ENSTGUG00000009756) ICOS (ENSTGUG00000009766) ENSTGUG00000025370 PARD3B (ENSTGUG00000009770) NRP2 (ENSTGUG00000009797) INO80D (ENSTGUG00000009890) NDUFS1 (ENSTGUG00000009895) EEF1B2 (ENSTGUG00000009931) ##22 CMKLR2 (ENSTGUG00000009954) ADAM23 (ENSTGUG00000009963) DYTN (ENSTGUG00000027316) FAM237A (ENSTGUG00000009992) MDH1B (ENSTGUG00000009999) FASTKD2 (ENSTGUG00000010004) CPO (ENSTGUG00000010012) KLF7 (ENSTGUG00000010017) CREB1 (ENSTGUG00000021110) METTL21A (ENSTGUG00000010049) ENSTGUG00000010055 ENSTGUG00000010062 PLEKHM3 (ENSTGUG00000010067) CARF (ENSTGUG00000010076) WDR12 (ENSTGUG00000010086) Common canary MODERN SPECIES 8 PIKFYVE (ENSSCAG00000001572) IDH1 (ENSSCAG00000001636) ENSSCAG00000001645 NBEAL1 (ENSSCAG00000001665) ENSSCAG00000001706 CYP20A1 (ENSSCAG00000001710) ABI2 (ENSSCAG00000001723) RAPH1 (ENSSCAG00000001749) CD28 (ENSSCAG00000001788) CTLA4 (ENSSCAG00000001805) ICOS (ENSSCAG00000001811) PARD3B (ENSSCAG00000001874) NRP2 (ENSSCAG00000002055) INO80D (ENSSCAG00000002336) NDUFS1 (ENSSCAG00000002344) EEF1B2 (ENSSCAG00000002352) ##22 ENSSCAG00000002359 CMKLR2 (ENSSCAG00000002370) ADAM23 (ENSSCAG00000002375) FAM237A (ENSSCAG00000002412) MDH1B (ENSSCAG00000002419) FASTKD2 (ENSSCAG00000002424) CPO (ENSSCAG00000002428) KLF7 (ENSSCAG00000002434) CREB1 (ENSSCAG00000002440) METTL21A (ENSSCAG00000002451) ENSSCAG00000002462 ENSSCAG00000002470 PLEKHM3 (ENSSCAG00000002482) CARF (ENSSCAG00000002493) WDR12 (ENSSCAG00000002510) Flycatcher MODERN SPECIES 26 ENSFALG00000023124 ENSFALG00000023047 ENSFALG00000003658 ENSFALG00000003669 CYP20A1 (ENSFALG00000003678) ABI2 (ENSFALG00000003705) RAPH1 (ENSFALG00000003713) CD28 (ENSFALG00000003718) CTLA4 (ENSFALG00000003729) ICOS (ENSFALG00000003743) PARD3B (ENSFALG00000003749) ENSFALG00000024358 NRP2 (ENSFALG00000003789) INO80D (ENSFALG00000003838) NDUFS1 (ENSFALG00000003849) EEF1B2 (ENSFALG00000003879) ##22 CMKLR2 (ENSFALG00000015287) ADAM23 (ENSFALG00000003913) FAM237A (ENSFALG00000003948) DYTN (ENSFALG00000003952) MDH1B (ENSFALG00000003957) FASTKD2 (ENSFALG00000003964) CPO (ENSFALG00000003980) KLF7 (ENSFALG00000003989) ENSFALG00000023985 CREB1 (ENSFALG00000003996) METTL21A (ENSFALG00000004003) ENSFALG00000027089 PLEKHM3 (ENSFALG00000004020) CARF (ENSFALG00000004023) WDR12 (ENSFALG00000004032) African ostrich MODERN SPECIES 602 ENSSCUG00000009062 NRP2 (ENSSCUG00000009065) INO80D (ENSSCUG00000009069) NDUFS1 (ENSSCUG00000009074) EEF1B2 (ENSSCUG00000009076) ##22 CMKLR2 (ENSSCUG00000009084) ADAM23 (ENSSCUG00000009094) FAM237A (ENSSCUG00000009115) DYTN (ENSSCUG00000009118) MDH1B (ENSSCUG00000009125) FASTKD2 (ENSSCUG00000009126) CPO (ENSSCUG00000009130) KLF7 (ENSSCUG00000009135) CREB1 (ENSSCUG00000009137) METTL21A (ENSSCUG00000009140) ENSSCUG00000009142 PLEKHM3 (ENSSCUG00000009146) ENSSCUG00000009148 CARF (ENSSCUG00000009150) WDR12 (ENSSCUG00000009160) Australian saltwater crocodile MODERN SPECIES 66 CARF (ENSCPRG00005001462) ENSCPRG00005001474 NBEAL1 (ENSCPRG00005001495) ENSCPRG00005001521 CYP20A1 (ENSCPRG00005001526) ABI2 (ENSCPRG00005001556) RAPH1 (ENSCPRG00005001588) CD28 (ENSCPRG00005001690) CTLA4 (ENSCPRG00005001699) ICOS (ENSCPRG00005001703) ENSCPRG00005001708 PARD3B (ENSCPRG00005001781) NRP2 (ENSCPRG00005001802) INO80D (ENSCPRG00005001847) NDUFS1 (ENSCPRG00005001849) EEF1B2 (ENSCPRG00005001854) ##22 CMKLR2 (ENSCPRG00005001863) ADAM23 (ENSCPRG00005001887) FAM237A (ENSCPRG00005001904) DYTN (ENSCPRG00005001912) MDH1B (ENSCPRG00005001923) FASTKD2 (ENSCPRG00005001926) CPO (ENSCPRG00005001934) KLF7 (ENSCPRG00005001954) CREB1 (ENSCPRG00005001961) METTL21A (ENSCPRG00005001979) ENSCPRG00005001990 ENSCPRG00005002000 PLEKHM3 (ENSCPRG00005002005) ENSCPRG00005002018 ENSCPRG00005002022 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00930000150950.b ENSGT00390000013916 ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000012547.b ENSGT00940000156307.b tuatara MODERN SPECIES 638 INO80D (ENSSPUG00000001624) NDUFS1 (ENSSPUG00000001696) EEF1B2 (ENSSPUG00000001704) ##22 CMKLR2 (ENSSPUG00000001735) ENSSPUG00000001749 ADAM23 (ENSSPUG00000001758) FAM237A (ENSSPUG00000001808) MDH1B (ENSSPUG00000001821) ENSSPUG00000001879 Episquamata ANCESTRAL SPECIES ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000012547.b ENSGT00940000156307.b ENSGT00940000159094 Toxicofera ANCESTRAL SPECIES ENSGT00930000150950.b ENSGT00950000185065 ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000012547.b ENSGT00940000156307.b ENSGT00940000159094 ENSGT00940000156597.b Elapidae ANCESTRAL SPECIES ENSGT00930000150950.b ENSGT00950000185065 ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089.g ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00390000000801 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 ENSGT00390000012547.b ENSGT00940000156307.b ENSGT00940000159094 ENSGT00940000156597.b Elapidae_a ANCESTRAL SPECIES 39 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 ENSGT00390000012547.b ENSGT00940000156307.b.g ENSGT00940000159094 ENSGT00940000156597.b Acanthophiinae ANCESTRAL SPECIES 39 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 ENSGT00390000012547.b ENSGT00940000156307.b.g ENSGT00940000159094 ENSGT00940000156597.b Mainland tiger snake MODERN SPECIES 50 ENSNSUG00000005042 PARD3B (ENSNSUG00000005020) NRP2 (ENSNSUG00000005004) INO80D (ENSNSUG00000004988) NDUFS1 (ENSNSUG00000004982) EEF1B2 (ENSNSUG00000004974) ##22 CMKLR2 (ENSNSUG00000004973) ADAM23 (ENSNSUG00000004968) MDH1B (ENSNSUG00000004966) FASTKD2 (ENSNSUG00000004850) KLF7 (ENSNSUG00000004849) CREB1 (ENSNSUG00000004838) METTL21A (ENSNSUG00000004836) ENSNSUG00000004835 ENSNSUG00000004833 ENSNSUG00000004832 PLEKHM3 (ENSNSUG00000004824) ENSNSUG00000004822 ENSNSUG00000004820 IDH1 (ENSNSUG00000004817) PIKFYVE (ENSNSUG00000004809) Eastern brown snake MODERN SPECIES 36 ENSPTXG00000008221 ENSPTXG00000008219 PARD3B (ENSPTXG00000008179) NRP2 (ENSPTXG00000008167) INO80D (ENSPTXG00000008163) NDUFS1 (ENSPTXG00000008161) EEF1B2 (ENSPTXG00000008156) ##22 CMKLR2 (ENSPTXG00000008154) ADAM23 (ENSPTXG00000008147) MDH1B (ENSPTXG00000008146) FASTKD2 (ENSPTXG00000008144) KLF7 (ENSPTXG00000008140) CREB1 (ENSPTXG00000008139) METTL21A (ENSPTXG00000008138) ENSPTXG00000008137 ENSPTXG00000008136 PLEKHM3 (ENSPTXG00000008135) IDH1 (ENSPTXG00000008132) PIKFYVE (ENSPTXG00000007358) PTH2R (ENSPTXG00000007351) ENSPTXG00000007270 UNC80 (ENSPTXG00000007262) Blue-lipped sea krait MODERN SPECIES 1571 EEF1B2 (ENSLLTG00000000692) ##22 Indian cobra MODERN SPECIES WDR12 (ENSNNAG00000008654) ENSNNAG00000008600 NBEAL1 (ENSNNAG00000008400) ENSNNAG00000008350 CYP20A1 (ENSNNAG00000008325) ABI2 (ENSNNAG00000008284) RAPH1 (ENSNNAG00000007996) CD28 (ENSNNAG00000007953) CTLA4 (ENSNNAG00000007939) ICOS (ENSNNAG00000007918) ENSNNAG00000007910 PARD3B (ENSNNAG00000007817) NRP2 (ENSNNAG00000007682) INO80D (ENSNNAG00000007613) NDUFS1 (ENSNNAG00000007093) EEF1B2 (ENSNNAG00000006992) ##22 CMKLR2 (ENSNNAG00000006981) ADAM23 (ENSNNAG00000006219) MDH1B (ENSNNAG00000006119) FASTKD2 (ENSNNAG00000006083) KLF7 (ENSNNAG00000006050) CREB1 (ENSNNAG00000006029) METTL21A (ENSNNAG00000005999) ENSNNAG00000005945 ENSNNAG00000005932 PLEKHM3 (ENSNNAG00000005905) ENSNNAG00000005842 ENSNNAG00000005828 IDH1 (ENSNNAG00000005790) PIKFYVE (ENSNNAG00000005522) PTH2R (ENSNNAG00000005410) Lizard MODERN SPECIES 822 ENSACAG00000037627 NBEAL1 (ENSACAG00000004721) ENSACAG00000004658 CYP20A1 (ENSACAG00000004604) ENSACAG00000045333 ABI2 (ENSACAG00000004539) RAPH1 (ENSACAG00000004500) CD28 (ENSACAG00000004486) ENSACAG00000028063 ENSACAG00000037252 PARD3B (ENSACAG00000004428) NRP2 (ENSACAG00000004128) INO80D (ENSACAG00000004095) NDUFS1 (ENSACAG00000001471) CMKLR2 (ENSACAG00000001415) EEF1B2 (ENSACAG00000001423) ##22 ADAM23 (ENSACAG00000009477) ENSACAG00000028631 MDH1B (ENSACAG00000009563) FASTKD2 (ENSACAG00000009610) KLF7 (ENSACAG00000009642) Laterata ANCESTRAL SPECIES 42 ENSGT00940000156449 ENSGT00950000183046.a.a ENSGT00930000150950.b ENSGT00390000013916 ENSGT00940000155041 ENSGT00390000017619 ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552 ENSGT00530000063873.A ENSGT00530000063873.B ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00390000004840 ENSGT00940000154107.b ENSGT00390000012547.b Argentine black and white tegu MODERN SPECIES 12 BMPR2 (ENSSMRG00000020784) FAM117B (ENSSMRG00000020783) WDR12 (ENSSMRG00000020782) ENSSMRG00000020781 NBEAL1 (ENSSMRG00000020780) ENSSMRG00000020779 CYP20A1 (ENSSMRG00000020778) ABI2 (ENSSMRG00000020777) RAPH1 (ENSSMRG00000020776) ENSSMRG00000020658 CTLA4 (ENSSMRG00000020651) PARD3B (ENSSMRG00000020645) NRP2 (ENSSMRG00000020640) INO80D (ENSSMRG00000020639) NDUFS1 (ENSSMRG00000020638) EEF1B2 (ENSSMRG00000020633) ##22 CMKLR2 (ENSSMRG00000020632) ADAM23 (ENSSMRG00000020333) FAM237A (ENSSMRG00000020332) MDH1B (ENSSMRG00000020330) FASTKD2 (ENSSMRG00000020328) KLF7 (ENSSMRG00000020327) CREB1 (ENSSMRG00000020325) METTL21A (ENSSMRG00000020324) ENSSMRG00000020322 ENSSMRG00000020321 PLEKHM3 (ENSSMRG00000020318) C2orf80 (ENSSMRG00000020315) ENSSMRG00000020312 IDH1 (ENSSMRG00000020311) PIKFYVE (ENSSMRG00000020308) Common wall lizard MODERN SPECIES WDR12 (ENSPMRG00000006856) ENSPMRG00000006909 CARF (ENSPMRG00000006921) ENSPMRG00000006930 NBEAL1 (ENSPMRG00000007358) CYP20A1 (ENSPMRG00000008728) ABI2 (ENSPMRG00000008747) RAPH1 (ENSPMRG00000008789) CD28 (ENSPMRG00000008873) CTLA4 (ENSPMRG00000008883) PARD3B (ENSPMRG00000008900) ENSPMRG00000008928 ENSPMRG00000008932 NRP2 (ENSPMRG00000008950) INO80D (ENSPMRG00000009029) EEF1B2 (ENSPMRG00000009046) ##22 NDUFS1 (ENSPMRG00000009096) ADAM23 (ENSPMRG00000009258) FAM237A (ENSPMRG00000009266) DYTN (ENSPMRG00000000114) ENSPMRG00000000134 ENSPMRG00000000143 FASTKD2 (ENSPMRG00000000149) KLF7 (ENSPMRG00000000188) CREB1 (ENSPMRG00000000233) METTL21A (ENSPMRG00000000269) ENSPMRG00000000296 ENSPMRG00000000317 ENSPMRG00000000354 PLEKHM3 (ENSPMRG00000000374) C2orf80 (ENSPMRG00000000402) Actinopterygii ANCESTRAL SPECIES 116 ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126 ENSGT00940000166348 ENSGT00940000161508 ENSGT00950000183214.a.b.a.b ENSGT00940000155270 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00530000063873.B ENSGT00530000063873.A ENSGT00940000156552 ENSGT00940000156089 ENSGT00940000176171 ENSGT00500000044939 ENSGT00390000005159 ENSGT00940000156444 ENSGT00940000155861.C Reedfish MODERN SPECIES 16 mfsd6a (ENSECRG00000006109) nemp2 (ENSECRG00000006123) nab1a (ENSECRG00000006135) glsa (ENSECRG00000006167) ENSECRG00000006225 STAT4 (ENSECRG00000006257) atic (ENSECRG00000006296) fn1a (ENSECRG00000006329) ENSECRG00000006363 cpo (ENSECRG00000006382) PARD3B (ENSECRG00000006452) ENSECRG00000006477 nrp2a (ENSECRG00000006488) ino80db (ENSECRG00000006513) ndufs1 (ENSECRG00000006523) eef1b2 (ENSECRG00000006546) ##22 CMKLR2 (ENSECRG00000006553) ADAM23 (ENSECRG00000006567) FAM237A (ENSECRG00000006588) mdh1b (ENSECRG00000006596) FASTKD2 (ENSECRG00000006608) CTLA4 (ENSECRG00000006618) raph1b (ENSECRG00000006637) abi2b (ENSECRG00000006679) cyp20a1 (ENSECRG00000006712) ENSECRG00000006727 tmem237b (ENSECRG00000006739) MPP4 (ENSECRG00000006757) ALS2 (ENSECRG00000006808) cdk15 (ENSECRG00000006849) fzd7a (ENSECRG00000006864) Neopterygii ANCESTRAL SPECIES 287 ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00940000160319.i.a ENSGT00940000158202 ENSGT00940000155390 ENSGT00940000155041 ENSGT00390000017619 Osteoglossocephalai ANCESTRAL SPECIES 22 ENSGT00940000155232.t.a.b.a ENSGT00940000155232.t.a.b.b ENSGT00940000156862 ENSGT00940000165805 ENSGT00390000004600.b.b ENSGT00950000183071.a.a.a.e.a ENSGT01030000234621.F ENSGT00950000182897.B.a.b.b.a ENSGT00940000160594.g.a ENSGT00940000155318.b.a ENSGT00940000155972.B ENSGT00940000155995.e.b ENSGT00940000153476.b.o.a ENSGT00940000157974 ENSGT00940000153514.b ENSGT00950000183014.f.a ##22 ENSGT00940000160642 ENSGT00940000158781 ENSGT00940000160994 ENSGT00940000160319.i.a ENSGT00940000158202 ENSGT00940000155390 ENSGT00940000155041 ENSGT00390000017619 Osteoglossiformes ANCESTRAL SPECIES 335 ENSGT00940000155318.b.a ENSGT00940000155972.B.eb ENSGT00940000155995.e.a ENSGT00940000153476.b.p ENSGT00940000157974.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000160642.g ENSGT00940000158781.b ENSGT00940000160994 ENSGT00940000166591.m ENSGT00940000164538 ENSGT00940000158202.p ENSGT00940000155390 ENSGT00940000155041 Asian bonytongue MODERN SPECIES 3 CLDN10 (ENSSFOG00015005845) UGGT2 (ENSSFOG00015005919) HS6ST3 (ENSSFOG00015006050) oxgr1a.2 (ENSSFOG00015006077) mbnl2 (ENSSFOG00015006106) RAP2A (ENSSFOG00015006212) ENSSFOG00015006223 ENSSFOG00015024727 ENSSFOG00015026887 FARP1 (ENSSFOG00015011616) DOCK9 (ENSSFOG00015011710) ENSSFOG00015011838 STK24 (ENSSFOG00015011871) INO80D (ENSSFOG00015011916) ENSSFOG00015011977 eef1b2 (ENSSFOG00015026020) ##22 CMKLR2 (ENSSFOG00015011987) ADAM23 (ENSSFOG00015012028) CASP10 (ENSSFOG00015030722) ENSSFOG00015012196 ENSSFOG00015024498 TRAK2 (ENSSFOG00015012256) STRADB (ENSSFOG00015012425) NBEAL1 (ENSSFOG00015012448) si:dkey-69o16.5 (ENSSFOG00015012557) nhej1 (ENSSFOG00015012574) ihha (ENSSFOG00015012595) ENSSFOG00015012660 ENSSFOG00015027977 bin1b (ENSSFOG00015030999) cyp27c1 (ENSSFOG00015012737) P. kingsleyae MODERN SPECIES 385 oxgr1a.2 (ENSPKIG00000011248) ENSPKIG00000011226 ENSPKIG00000011145 UGGT2 (ENSPKIG00000011057) mbnl2 (ENSPKIG00000010987) RAP2A (ENSPKIG00000010953) ENSPKIG00000010937 FARP1 (ENSPKIG00000010894) DOCK9 (ENSPKIG00000010789) slc15a1b (ENSPKIG00000010712) STK24 (ENSPKIG00000010560) INO80D (ENSPKIG00000010473) ENSPKIG00000010453 eef1b2 (ENSPKIG00000010432) ##22 CMKLR2 (ENSPKIG00000010415) ENSPKIG00000010401 ADAM23 (ENSPKIG00000010283) ENSPKIG00000010185 casp8 (ENSPKIG00000010125) ENSPKIG00000010094 ENSPKIG00000010066 TRAK2 (ENSPKIG00000010030) STRADB (ENSPKIG00000009985) NBEAL1 (ENSPKIG00000009610) crygm3 (ENSPKIG00000009450) crygs3 (ENSPKIG00000009265) Clupeocephala ANCESTRAL SPECIES 3 ENSGT00940000155232.t.a.b.a ENSGT00940000165805 ENSGT00390000004600.b.b ENSGT00950000183071.a.a.a.e.a ENSGT01030000234621.F.d ENSGT00950000182897.B.a.b.b.a ENSGT00940000160594.g.a ENSGT00940000155318.b.a ENSGT00940000176946 ENSGT00940000155972.B ENSGT00940000155995.e.b ENSGT00940000153476.b.o.a ENSGT00940000153476.b.p ENSGT00940000157974 ENSGT00940000153514.b.m.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00440000037606.b ENSGT00940000153514.b.m.a ENSGT00940000160642 ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000160994 ENSGT00940000157618 ENSGT00940000156791 ENSGT00680000100059 ENSGT00940000157883.a.a ENSGT00390000003271 ENSGT00940000157883.a.b.f ENSGT00940000164264 ENSGT00940000156112 Euteleosteomorpha ANCESTRAL SPECIES 434 ENSGT00390000009987 ENSGT00940000153514.b.m.b ENSGT00950000183014.f.a ##22 ENSGT00940000162403 Acanthomorphata ANCESTRAL SPECIES 460 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 Euacanthomorphacea ANCESTRAL SPECIES 246 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005018371 ENSMMDG00005018370 ENSMMDG00005018368 ENSMMDG00005018360 ENSMMDG00005018342 kalrnb (ENSMMDG00005018336) cdk5r2a (ENSMMDG00005018309) ENSMMDG00005017535 ENSMMDG00005017506 vps16 (ENSMMDG00005014504) rgn (ENSMMDG00005014427) zgc:112023 (ENSMMDG00005014399) cavin2b (ENSMMDG00005014394) ebpl (ENSMMDG00005014393) arl11 (ENSMMDG00005014389) eef1b2 (ENSMMDG00005014373) ##22 ENSMMDG00005014368 ENSMMDG00005014363 creg1 (ENSMMDG00005014361) ENSMMDG00005014356 dnajc27 (ENSMMDG00005014350) ENSMMDG00005014142 XDH (ENSMMDG00005010800) tspan7b (ENSMMDG00005010718) ENSMMDG00005010717 ENSMMDG00005010716 ENSMMDG00005010714 ENSMMDG00005010713 ENSMMDG00005010710 ENSMMDG00005010707 ENSMMDG00005010706 Percomorphaceae ANCESTRAL SPECIES 22 ENSGT00510000048137 ENSGT00940000154607.a ENSGT00940000160303.a.b ENSGT00390000008846 ENSGT00940000163243 ENSGT00950000182913.A.b.a ENSGT00940000155248.vb.g.a ENSGT00940000155248.vb.g.b ENSGT00390000002188 ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b ENSGT00940000158239.a.b Tiger tail seahorse MODERN SPECIES 514 ENSHCOG00000002368 ENSHCOG00000002376 ENSHCOG00000002380 VANGL1 (ENSHCOG00000002405) ENSHCOG00000002416 poglut1 (ENSHCOG00000002429) ENSHCOG00000002437 ENSHCOG00000002443 ENSHCOG00000002451 abcc4 (ENSHCOG00000002492) ENSHCOG00000002521 vps16 (ENSHCOG00000002549) cavin2b (ENSHCOG00000002559) arl11 (ENSHCOG00000002573) ENSHCOG00000002582 eef1b2 (ENSHCOG00000002591) ##22 ENSHCOG00000002601 ENSHCOG00000002611 mlpha (ENSHCOG00000002625) ENSHCOG00000002638 dph3 (ENSHCOG00000002643) ENSHCOG00000002645 fzd7a (ENSHCOG00000002652) cdk15 (ENSHCOG00000002663) ENSHCOG00000002674 abi3bpb (ENSHCOG00000002686) ENSHCOG00000002694 ftcd (ENSHCOG00000002718) ENSHCOG00000002732 ENSHCOG00000002743 ENSHCOG00000002766 Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b ENSGT00940000158239.a.b ENSGT00940000159606 ENSGT00390000005581.a Ovalentaria ANCESTRAL SPECIES 31 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00940000178125 ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a Ovalentaria_B ANCESTRAL SPECIES 69 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a Pomacentridae ANCESTRAL SPECIES 83 ENSGT00950000182913.A.b.a ENSGT00940000163243 ENSGT00390000008846 ENSGT00940000154607.a ENSGT00510000048137 ENSGT00940000159969.b.a.b ENSGT00940000175756 ENSGT00940000153571.b ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT00940000158714.c Pomacentridae_A ANCESTRAL SPECIES 82 ENSGT00950000182913.A.b.a ENSGT00940000163243 ENSGT00390000008846 ENSGT00940000154607.a ENSGT00510000048137 ENSGT00940000159969.b.a.b ENSGT00940000175756 ENSGT00940000153571.b ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT00940000158714.c Amphiprion ANCESTRAL SPECIES 94 ENSGT00950000182913.A.b.a ENSGT00940000163243 ENSGT00390000008846 ENSGT00940000154607.a ENSGT00510000048137 ENSGT00940000159969.b.a.b ENSGT00940000175756 ENSGT00940000153571.b ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT01090000260059.a.b.b.b.a.d.a.a.b.a.b.b ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT00940000158714.c ENSGT00390000000145 Clown anemonefish MODERN SPECIES 2507 ENSAOCG00000009966 rgn (ENSAOCG00000009916) vps16 (ENSAOCG00000009882) cavin2b (ENSAOCG00000009790) ebpl (ENSAOCG00000009756) arl11 (ENSAOCG00000000600) eef1b2 (ENSAOCG00000009704) ##22 ENSAOCG00000009668 ENSAOCG00000009643 ENSAOCG00000009618 ENSAOCG00000009608 cd59 (ENSAOCG00000009588) SNX9 (ENSAOCG00000009565) ENSAOCG00000009531 Orange clownfish MODERN SPECIES 16 ENSAPEG00000008631 ENSAPEG00000008612 ENSAPEG00000008595 SH3YL1 (ENSAPEG00000008544) ENSAPEG00000008519 ENSAPEG00000008497 fbxo3 (ENSAPEG00000008443) cdk5r2a (ENSAPEG00000008435) ENSAPEG00000008331 rgn (ENSAPEG00000008304) vps16 (ENSAPEG00000008217) cavin2b (ENSAPEG00000008026) ebpl (ENSAPEG00000007991) arl11 (ENSAPEG00000007983) ENSAPEG00000007969 eef1b2 (ENSAPEG00000007940) ##22 ENSAPEG00000007927 ENSAPEG00000007918 ENSAPEG00000007904 ENSAPEG00000007898 cd59 (ENSAPEG00000007881) SNX9 (ENSAPEG00000007655) ENSAPEG00000007555 mlpha (ENSAPEG00000007517) trim63a (ENSAPEG00000007491) ST6GAL2 (ENSAPEG00000007468) ECRG4 (ENSAPEG00000007434) ENSAPEG00000007414 EFR3B (ENSAPEG00000007392) pomca (ENSAPEG00000007378) GLI2 (ENSAPEG00000007312) Spiny chromis MODERN SPECIES 2790 ENSAPOG00000000305 arl11 (ENSAPOG00000010864) ebpl (ENSAPOG00000010838) eef1b2 (ENSAPOG00000010815) ##22 ENSAPOG00000010743 ENSAPOG00000010721 Bicolor damselfish MODERN SPECIES 1736 kalrnb (ENSSPAG00000005298) ENSSPAG00000005335 bco1l (ENSSPAG00000005361) ENSSPAG00000005383 ENSSPAG00000005451 SH3YL1 (ENSSPAG00000005481) ENSSPAG00000005509 ENSSPAG00000005522 cdk5r2a (ENSSPAG00000005535) ENSSPAG00000005545 vps16 (ENSSPAG00000005580) ENSSPAG00000005634 ebpl (ENSSPAG00000005756) arl11 (ENSSPAG00000005773) eef1b2 (ENSSPAG00000005791) ##22 ENSSPAG00000005814 ENSSPAG00000005833 ENSSPAG00000005844 Cichlidae ANCESTRAL SPECIES 33 ENSGT00940000167797 ENSGT00950000183106.a.a.b ENSGT00950000183063.c.a ENSGT00940000154648.a.b ENSGT00940000177736 ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ENSGT01030000234629.C.b ENSGT00950000183086.a.a.b.h.a ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00940000155439.a.b.b ENSGT00940000167797 ENSGT00950000183106.a.a.b ENSGT00950000183063.c.a ENSGT00940000154648.a.b ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ENSGT01030000234629.C.b ENSGT00950000183086.a.a.b.h.a ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 Nile tilapia MODERN SPECIES 6 cdh2 (ENSONIG00000007245) aqp4 (ENSONIG00000007255) ENSONIG00000028361 ENSONIG00000007258 DDX10 (ENSONIG00000007263) SZT2 (ENSONIG00000007264) ENSONIG00000028246 ENSONIG00000041794 vps16 (ENSONIG00000017643) cavin2b (ENSONIG00000017641) ebpl (ENSONIG00000017640) arl11 (ENSONIG00000017639) ENSONIG00000036810 ENSONIG00000039888 ENSONIG00000017633 eef1b2 (ENSONIG00000017630) ##22 ENSONIG00000017629 ENSONIG00000042777 ENSONIG00000032527 ENSONIG00000039307 ENSONIG00000035558 ENSONIG00000017627 ENSONIG00000037855 ENSONIG00000037412 ENSONIG00000017625 ENSONIG00000039982 ENSONIG00000034616 ENSONIG00000036345 ENSONIG00000029702 ENSONIG00000031427 ENSONIG00000040565 Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00940000155439.a.b.b.l ENSGT00940000167797 ENSGT00950000183106.a.a.b ENSGT00950000183063.c.a ENSGT00940000154648.a.b ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ENSGT01030000234629.C.b ENSGT00950000183086.a.a.b.h.a ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 Lyretail cichlid MODERN SPECIES 312 cdk5r2a (ENSNBRG00000015876) ENSNBRG00000015898 rgn (ENSNBRG00000016022) vps16 (ENSNBRG00000016044) cavin2b (ENSNBRG00000016098) ebpl (ENSNBRG00000016117) ENSNBRG00000016137 eef1b2 (ENSNBRG00000016163) ##22 ENSNBRG00000016183 ENSNBRG00000016213 cd59 (ENSNBRG00000016245) SNX9 (ENSNBRG00000016290) ACKR3 (ENSNBRG00000016441) mlpha (ENSNBRG00000016468) cdh2 (ENSNBRG00000016523) aqp4 (ENSNBRG00000016579) ENSNBRG00000016599 ENSNBRG00000016615 DDX10 (ENSNBRG00000016684) ENSNBRG00000016694 SZT2 (ENSNBRG00000016724) hyi (ENSNBRG00000016855) ptprfa (ENSNBRG00000016895) Haplochromini ANCESTRAL SPECIES 35 ENSGT00950000183063.c.a ENSGT00940000154648.a.b ENSGT00940000153386.B ENSGT00940000164087 ENSGT00940000158424 ENSGT00940000157731 ENSGT00940000165979 ENSGT00970000193372.b.a.b ENSGT00390000010895.a ENSGT00390000013776 ENSGT00940000155954.b ENSGT00530000063489.a ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00940000154907.a.a.x.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00940000176917 ENSGT00940000159500 ENSGT00940000166595.b ENSGT00940000156504.i.a ENSGT00940000156948.j ENSGT00390000016324 ENSGT00940000154369.g.b ENSGT01030000234629.C.b ENSGT00950000183086.a.a.b.h.a ENSGT00950000183136.b.b.c ENSGT00940000160165.a.b ENSGT00900000141083.c.b ENSGT00390000006095 ENSGT00940000157522 Burton s mouthbrooder MODERN SPECIES 1253 vps16 (ENSHBUG00000000767) ENSHBUG00000007263 ENSHBUG00000007353 ENSHBUG00000007374 eef1b2 (ENSHBUG00000007401) ##22 Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00390000008812.a.b ENSGT00940000155515.a.a.e.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00530000063715.b ENSGT00940000154907.a.a.x.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g.e ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.b.kb.d.b ENSGT00940000155060.C.a.b Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00390000008812.a.b ENSGT00940000155515.a.a.e.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00530000063715.b ENSGT00940000154907.a.a.x.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00980000198690.a ENSGT00730000111696.a ENSGT00940000156557.g.e ENSGT00940000176853.A ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00940000156258.f.a.a.a ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 Eastern happy MODERN SPECIES 6 cdk5r2a (ENSACLG00000005620) ENSACLG00000005579 rgn (ENSACLG00000005568) vps16 (ENSACLG00000005366) cavin2b (ENSACLG00000005280) ENSACLG00000005260 ENSACLG00000005236 ebpl (ENSACLG00000005233) ENSACLG00000005209 ENSACLG00000003971 eef1b2 (ENSACLG00000003899) ##22 ENSACLG00000003896 ENSACLG00000003860 ENSACLG00000003852 cd59 (ENSACLG00000003836) SNX9 (ENSACLG00000003794) ENSACLG00000003739 ENSACLG00000003732 ACKR3 (ENSACLG00000003728) mlpha (ENSACLG00000003689) ENSACLG00000003672 ENSACLG00000003662 ENSACLG00000003657 ENSACLG00000003650 cdh2 (ENSACLG00000003613) aqp4 (ENSACLG00000003595) Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1096 crk (ENSMZEG00005004162) LRRC75A (ENSMZEG00005004179) poldip2 (ENSMZEG00005004201) tmem199 (ENSMZEG00005004229) ENSMZEG00005004247 smtnl (ENSMZEG00005004268) ENSMZEG00005004308 ENSMZEG00005004351 gemin4 (ENSMZEG00005004438) TLCD3A (ENSMZEG00005004444) usp2a (ENSMZEG00005004453) TBCEL (ENSMZEG00005004478) kcne4 (ENSMZEG00005004495) ENSMZEG00005004509 farsb (ENSMZEG00005004544) ENSMZEG00005004588 ##22 ENSMZEG00005004594 SGPP2 (ENSMZEG00005004600) ENSMZEG00005004622 pax3b (ENSMZEG00005004628) epha4a (ENSMZEG00005004684) pxylp1 (ENSMZEG00005004789) SLC25A36 (ENSMZEG00005004803) spsb4a (ENSMZEG00005004837) ENSMZEG00005004855 CLSTN2 (ENSMZEG00005004867) ENSMZEG00005004907 rbp2a (ENSMZEG00005004916) COPB2 (ENSMZEG00005004942) mrps22 (ENSMZEG00005005002) foxl2a (ENSMZEG00005005026) Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005004242 mlpha (ENSMZEG00005004215) ACKR3 (ENSMZEG00005004206) ENSMZEG00005004200 ENSMZEG00005004166 cdk5r2a (ENSMZEG00005004150) ENSMZEG00005004100 rgn (ENSMZEG00005004076) vps16 (ENSMZEG00005003978) cavin2b (ENSMZEG00005003917) ENSMZEG00005003894 ebpl (ENSMZEG00005003878) ENSMZEG00005003860 ENSMZEG00005003842 ENSMZEG00005003811 eef1b2 (ENSMZEG00005003788) ##22 ENSMZEG00005003773 cd59 (ENSMZEG00005003755) ENSMZEG00005003726 ENSMZEG00005003708 ENSMZEG00005003642 ENSMZEG00005003611 DDX10 (ENSMZEG00005003586) ENSMZEG00005003575 SZT2 (ENSMZEG00005003433) hyi (ENSMZEG00005003394) ENSMZEG00005003341 ptprfa (ENSMZEG00005003235) ENSMZEG00005003207 ENSMZEG00005003191 ENSMZEG00005003176 P. nyererei DUPLICATION P. nyererei MODERN SPECIES 378 CLCN2 (ENSPNYG00000010513) ENSPNYG00000010658 fam131ab (ENSPNYG00000010700) alp3 (ENSPNYG00000010734) ENSPNYG00000010815 psmd2 (ENSPNYG00000010954) prss16 (ENSPNYG00000011040) serpine2 (ENSPNYG00000011048) wdfy1 (ENSPNYG00000011057) dhrs12la (ENSPNYG00000011099) AP1S3 (ENSPNYG00000011149) ENSPNYG00000011372 kcne4 (ENSPNYG00000011382) acsl3a (ENSPNYG00000011402) farsb (ENSPNYG00000011433) ENSPNYG00000011468 ##22 ENSPNYG00000011481 SGPP2 (ENSPNYG00000011492) ENSPNYG00000011511 pax3b (ENSPNYG00000011527) ENSPNYG00000011554 epha4a (ENSPNYG00000011571) pxylp1 (ENSPNYG00000011653) SLC25A36 (ENSPNYG00000011731) spsb4a (ENSPNYG00000011766) CLSTN2 (ENSPNYG00000011806) lpar5b (ENSPNYG00000011904) rbp2a (ENSPNYG00000011924) COPB2 (ENSPNYG00000011944) mrps22 (ENSPNYG00000011985) foxl2b (ENSPNYG00000012072) P. nyererei MODERN SPECIES 356 cdk5r2a (ENSPNYG00000003343) ENSPNYG00000003270 rgn (ENSPNYG00000003235) ebpl (ENSPNYG00000003221) vps16 (ENSPNYG00000003154) ENSPNYG00000003113 ENSPNYG00000002322 eef1b2 (ENSPNYG00000002183) ##22 ENSPNYG00000002143 cd59 (ENSPNYG00000002135) SNX9 (ENSPNYG00000002081) ACKR3 (ENSPNYG00000002062) mlpha (ENSPNYG00000002012) ENSPNYG00000001993 ENSPNYG00000001972 cdh2 (ENSPNYG00000001907) aqp4 (ENSPNYG00000001878) ENSPNYG00000001861 ENSPNYG00000001803 ENSPNYG00000001771 DDX10 (ENSPNYG00000001756) ENSPNYG00000001746 SZT2 (ENSPNYG00000001578) Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 672 ENSACIG00000020752 fam131ab (ENSACIG00000020777) alp3 (ENSACIG00000020821) ENSACIG00000020879 ENSACIG00000021052 PSMD2 (ENSACIG00000021071) prss16 (ENSACIG00000021099) serpine2 (ENSACIG00000021137) wdfy1 (ENSACIG00000021224) dhrs12la (ENSACIG00000021254) AP1S3 (ENSACIG00000021293) ENSACIG00000021395 kcne4 (ENSACIG00000021409) acsl3a (ENSACIG00000021438) farsb (ENSACIG00000021623) ENSACIG00000021650 ##22 ENSACIG00000021674 SGPP2 (ENSACIG00000021680) ENSACIG00000021692 pax3b (ENSACIG00000021695) epha4a (ENSACIG00000021714) pxylp1 (ENSACIG00000021740) Midas cichlid MODERN SPECIES 749 ENSACIG00000023288 ENSACIG00000023277 rgn (ENSACIG00000023265) vps16 (ENSACIG00000023255) cavin2b (ENSACIG00000023240) EBPL (ENSACIG00000023235) arl11 (ENSACIG00000023231) ENSACIG00000023224 ENSACIG00000023219 eef1b2 (ENSACIG00000023214) ##22 ENSACIG00000023202 Atherinomorphae ANCESTRAL SPECIES 42 ENSGT00940000157694 ENSGT00940000154505.A.c ENSGT00390000001101 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00530000067036.c ENSGT00940000165332.C ENSGT00940000164059 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a ENSGT00940000159606 ENSGT00940000158239.a.b Oryzias ANCESTRAL SPECIES 74 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000179271 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT00940000172652 ENSGT00940000159169 ENSGT00530000063558.A.c.b ENSGT00530000063503.a.a.a Oryzias_a ANCESTRAL SPECIES 101 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00940000172652 ENSGT00940000159169 ENSGT00530000063558.A.c.b ENSGT00530000063503.b ENSGT00940000157308.h Japanese Medaka HdrR MODERN SPECIES 11 ENSORLG00000027803 olgc3 (ENSORLG00000018002) ENSORLG00000021888 ENSORLG00000026638 ENSORLG00000018917 rgn (ENSORLG00000025381) vps16 (ENSORLG00000022777) cavin2b (ENSORLG00000018433) ebpl (ENSORLG00000018464) ENSORLG00000028756 eef1b2 (ENSORLG00000018533) ##22 arl11 (ENSORLG00000018486) ENSORLG00000028428 ENSORLG00000028337 cd59 (ENSORLG00000018558) mlpha (ENSORLG00000018566) ENSORLG00000030005 ENSORLG00000026167 cdk15 (ENSORLG00000024266) ENSORLG00000027269 ENSORLG00000019538 ENSORLG00000027905 ENSORLG00000022597 abi3bpb (ENSORLG00000026438) ENSORLG00000029143 ENSORLG00000025398 Chinese medaka MODERN SPECIES 4972 ENSOSIG00000004579 ebpl (ENSOSIG00000004576) arl11 (ENSOSIG00000004575) eef1b2 (ENSOSIG00000004572) ##22 ENSOSIG00000004571 cd59 (ENSOSIG00000004569) mlpha (ENSOSIG00000004554) ENSOSIG00000004545 cdk15 (ENSOSIG00000004535) fzd7a (ENSOSIG00000004529) ENSOSIG00000004527 ENSOSIG00000004525 ENSOSIG00000004516 ENSOSIG00000004513 Oryzias_b ANCESTRAL SPECIES 63 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000179271 ENSGT00730000111696.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT00940000172652 ENSGT00940000159169 ENSGT00530000063558.A.c.b ENSGT00530000063503.a.a.a ENSGT00940000178125 ENSGT00940000157308.h Javanese ricefish MODERN SPECIES 11 ENSOJAG00000000264 vps16 (ENSOJAG00000000203) cavin2b (ENSOJAG00000000147) ebpl (ENSOJAG00000000093) arl11 (ENSOJAG00000000083) eef1b2 (ENSOJAG00000000060) ##22 ENSOJAG00000009457 ENSOJAG00000009439 mlpha (ENSOJAG00000009418) ENSOJAG00000009399 ENSOJAG00000009379 cdk15 (ENSOJAG00000009362) fzd7a (ENSOJAG00000009316) ENSOJAG00000009300 dph3 (ENSOJAG00000009278) ENSOJAG00000009266 ENSOJAG00000009137 ENSOJAG00000009115 rgn (ENSOJAG00000009097) MLLT1 (ENSOJAG00000009064) acsbg2 (ENSOJAG00000007657) Indian medaka MODERN SPECIES 789 vps16 (ENSOMEG00000007502) cavin2b (ENSOMEG00000007456) ebpl (ENSOMEG00000007431) arl11 (ENSOMEG00000007419) eef1b2 (ENSOMEG00000007375) ##22 ENSOMEG00000007332 ENSOMEG00000007306 ENSOMEG00000007279 mlpha (ENSOMEG00000007229) ENSOMEG00000007159 ENSOMEG00000007133 cdk15 (ENSOMEG00000007020) fzd7a (ENSOMEG00000006996) ENSOMEG00000006993 ENSOMEG00000006982 ENSOMEG00000006959 abi3bpb (ENSOMEG00000006910) ENSOMEG00000006817 ENSOMEG00000006773 senp7b (ENSOMEG00000006756) Cyprinodontiformes ANCESTRAL SPECIES 42 ENSGT00940000157694 ENSGT00940000154505.A.c ENSGT00390000001101 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00530000067036.c ENSGT00940000165332.C ENSGT00940000164059 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a ENSGT00940000153737.b.g.a ENSGT00500000044890.a.a.f Aplocheiloidei ANCESTRAL SPECIES 202 ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00950000183138.a.b.r.a Mangrove rivulus MODERN SPECIES 686 ENSKMAG00000001082 rgn (ENSKMAG00000001140) vps16 (ENSKMAG00000001157) cavin2b (ENSKMAG00000001183) ebpl (ENSKMAG00000001214) arl11 (ENSKMAG00000001256) eef1b2 (ENSKMAG00000001270) ##22 ENSKMAG00000001315 Cyprinodontoidei ANCESTRAL SPECIES 53 ENSGT00940000154505.A.c ENSGT00390000001101 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00530000067036.c ENSGT00940000165332.C ENSGT00940000164059 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.c ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00940000178125 ENSGT00530000063503.b ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a Poeciliinae ANCESTRAL SPECIES 34 ENSGT00940000154505.A.c ENSGT00390000001101 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00530000067036.c ENSGT00940000165332.C ENSGT00940000164059 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.c ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00940000178125 ENSGT00530000063503.b ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a Platyfish MODERN SPECIES 16 prozb (ENSXMAG00000006259) pcid2 (ENSXMAG00000006230) ENSXMAG00000006226 ENSXMAG00000026004 ENSXMAG00000006219 f2 (ENSXMAG00000006156) ENSXMAG00000029811 ENSXMAG00000026658 cdk5r2a (ENSXMAG00000006154) ENSXMAG00000006118 rgn (ENSXMAG00000006115) vps16 (ENSXMAG00000006070) cavin2b (ENSXMAG00000006066) ebpl (ENSXMAG00000024072) arl11 (ENSXMAG00000023188) eef1b2 (ENSXMAG00000006050) ##22 ENSXMAG00000026383 ENSXMAG00000020979 cd59 (ENSXMAG00000023562) ACKR3 (ENSXMAG00000006047) mlpha (ENSXMAG00000006029) ENSXMAG00000021036 ENSXMAG00000025794 ENSXMAG00000023128 ENSXMAG00000028287 ENSXMAG00000006002 ENSXMAG00000022752 ENSXMAG00000022407 ENSXMAG00000029304 abi3bpb (ENSXMAG00000005976) ENSXMAG00000005968 Poecilia ANCESTRAL SPECIES 27 ENSGT00390000001101 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00530000067036.c ENSGT00940000165332.C ENSGT00940000164059 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.c ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00530000063503.b ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a ENSGT01100000263489.a.a.b.a.a.b.b.b.b.a.a ENSGT00940000153737.b.g.a ENSGT00500000044890.a.a.f ENSGT00940000156153.y.b Guppy MODERN SPECIES 450 ENSPREG00000011439 ENSPREG00000011397 ENSPREG00000011374 ENSPREG00000011335 f2 (ENSPREG00000011285) ENSPREG00000011236 ENSPREG00000011118 ENSPREG00000011042 ENSPREG00000010985 rgn (ENSPREG00000010889) vps16 (ENSPREG00000010861) cavin2b (ENSPREG00000010835) ebpl (ENSPREG00000010822) arl11 (ENSPREG00000010815) ENSPREG00000010786 eef1b2 (ENSPREG00000010774) ##22 cd59 (ENSPREG00000010760) SNX9 (ENSPREG00000010712) mlpha (ENSPREG00000010657) ENSPREG00000010581 senp7b (ENSPREG00000010522) ENSPREG00000010500 ENSPREG00000010478 ENSPREG00000010466 ftcd (ENSPREG00000010410) ENSPREG00000010393 ENSPREG00000010382 ENSPREG00000010378 ENSPREG00000010370 ENSPREG00000010356 mid1ip1b (ENSPREG00000010338) NAME_6 ANCESTRAL SPECIES 257 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT00940000157308.h ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00940000159169 ENSGT00390000005581.a ENSGT01100000263489.a.a.b.a.a.b.b.b.b.a.a Sailfin molly MODERN SPECIES 928 ENSPLAG00000009507 ENSPLAG00000009528 rgn (ENSPLAG00000009554) vps16 (ENSPLAG00000009563) cavin2b (ENSPLAG00000009575) ebpl (ENSPLAG00000009594) arl11 (ENSPLAG00000000576) ENSPLAG00000009643 eef1b2 (ENSPLAG00000009681) ##22 cd59 (ENSPLAG00000009700) SNX9 (ENSPLAG00000009719) ACKR3 (ENSPLAG00000009727) mlpha (ENSPLAG00000009744) ENSPLAG00000009833 ENSPLAG00000009854 senp7b (ENSPLAG00000009863) IMPG2 (ENSPLAG00000009946) abi3bpb (ENSPLAG00000009959) Amazon molly DUPLICATION Amazon molly MODERN SPECIES 388 ENSPFOG00000024009 CLCN2 (ENSPFOG00000013130) ENSPFOG00000013374 fam131ab (ENSPFOG00000013376) alp3 (ENSPFOG00000013398) ENSPFOG00000013606 psmd2 (ENSPFOG00000013769) prss16 (ENSPFOG00000013876) serpine2 (ENSPFOG00000013917) wdfy1 (ENSPFOG00000013955) dhrs12la (ENSPFOG00000024834) AP1S3 (ENSPFOG00000014061) ENSPFOG00000014079 kcne4 (ENSPFOG00000014082) acsl3a (ENSPFOG00000014085) ENSPFOG00000014134 ##22 SGPP2 (ENSPFOG00000014243) ENSPFOG00000022031 pax3b (ENSPFOG00000014283) epha4a (ENSPFOG00000014392) Amazon molly MODERN SPECIES 797 ENSPFOG00000007306 ENSPFOG00000007290 cdk5r2a (ENSPFOG00000007287) ENSPFOG00000006762 rgn (ENSPFOG00000006626) vps16 (ENSPFOG00000006387) cavin2b (ENSPFOG00000006316) ebpl (ENSPFOG00000006272) arl11 (ENSPFOG00000006232) eef1b2 (ENSPFOG00000006140) ##22 ENSPFOG00000022038 ENSPFOG00000006135 ENSPFOG00000023713 cd59 (ENSPFOG00000006094) SNX9 (ENSPFOG00000005899) ACKR3 (ENSPFOG00000020010) mlpha (ENSPFOG00000005782) ENSPFOG00000005385 ENSPFOG00000005264 ENSPFOG00000024521 abi3bpb (ENSPFOG00000004855) ADGRG7 (ENSPFOG00000004617) ftcd (ENSPFOG00000004368) ENSPFOG00000004358 ENSPFOG00000022432 NAME_4 ANCESTRAL SPECIES 311 ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 615 ENSCVAG00000000490 ENSCVAG00000018798 ENSCVAG00000018802 farsb (ENSCVAG00000018815) ENSCVAG00000018830 eef1b2 (ENSCVAG00000018833) ##22 ENSCVAG00000018847 pax3b (ENSCVAG00000018904) epha4a (ENSCVAG00000019581) Sheepshead minnow MODERN SPECIES 1314 ftcd (ENSCVAG00000019471) ENSCVAG00000019491 rgn (ENSCVAG00000019499) ENSCVAG00000019512 vps16 (ENSCVAG00000019524) cavin2b (ENSCVAG00000000920) ebpl (ENSCVAG00000019560) arl11 (ENSCVAG00000019595) ENSCVAG00000019615 eef1b2 (ENSCVAG00000019633) ##22 ENSCVAG00000019661 ENSCVAG00000019672 ACKR3 (ENSCVAG00000019676) Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b ENSGT00940000158239.a.b ENSGT00940000159606 ENSGT00390000005581.a Eupercaria ANCESTRAL SPECIES 40 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b Eupecaria_A ANCESTRAL SPECIES 37 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b Ballan wrasse MODERN SPECIES 949 ENSLBEG00000016147 ENSLBEG00000016082 rgn (ENSLBEG00000016037) vps16 (ENSLBEG00000015922) cavin2b (ENSLBEG00000015834) ebpl (ENSLBEG00000015793) arl11 (ENSLBEG00000015748) ENSLBEG00000015690 eef1b2 (ENSLBEG00000015644) ##22 ENSLBEG00000015620 Eupecaria_B ANCESTRAL SPECIES 28 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b ENSGT00940000159606 ENSGT00940000158239.a.a.a.b ENSGT00390000005581.a Perciformes ANCESTRAL SPECIES 53 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00390000005581.a ENSGT00530000063558.A.c.b ENSGT00530000063503.a.a.a ENSGT00940000157308.h ENSGT01100000263476.E.b.a.a.b.a.a ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a ENSGT00980000198678 ENSGT00940000158239.a.b ENSGT00940000158239.b ENSGT00940000159606 Cottioidei ANCESTRAL SPECIES 49 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00730000111696.a ENSGT00390000005581.a ENSGT00530000063503.a.a.a ENSGT00940000157308.h ENSGT00940000158239.a.b ENSGT00940000159606 ENSGT00940000172021 ENSGT00940000153571.b ENSGT00940000164059 ENSGT00950000183114.a.a ENSGT00940000157133 ENSGT00940000177133 ENSGT00390000005914.a ENSGT00940000158209 ENSGT00940000154474.A Lumpfish MODERN SPECIES 11 ENSCLMG00005012040 ENSCLMG00005012043 rgn (ENSCLMG00005012174) vps16 (ENSCLMG00005012176) ENSCLMG00005012246 ENSCLMG00005012247 ebpl (ENSCLMG00005012249) arl11 (ENSCLMG00005012270) ENSCLMG00005012272 eef1b2 (ENSCLMG00005012274) ##22 ENSCLMG00005012276 cd59 (ENSCLMG00005012277) ftcd (ENSCLMG00005012279) ENSCLMG00005012290 ENSCLMG00005012291 ENSCLMG00005012293 FZD7 (ENSCLMG00005012295) ENSCLMG00005012296 cdk15 (ENSCLMG00005012298) fbxo3 (ENSCLMG00005012300) f2 (ENSCLMG00005012301) dnajc27 (ENSCLMG00005012942) ENSCLMG00005012943 creg1 (ENSCLMG00005012945) ENSCLMG00005012948 Stickleback MODERN SPECIES mdka (ENSGACG00000015348) CHRM4 (ENSGACG00000015349) ENSGACG00000015352 ENSGACG00000015353 ENSGACG00000015355 ENSGACG00000015357 ENSGACG00000015358 TAAR1 (ENSGACG00000015361) ENSGACG00000015364 cdk5r2a (ENSGACG00000015367) ENSGACG00000015371 rgn (ENSGACG00000015380) vps16 (ENSGACG00000015383) cavin2b (ENSGACG00000015398) arl11 (ENSGACG00000015399) eef1b2 (ENSGACG00000015402) ##22 ENSGACG00000015406 cd59 (ENSGACG00000015409) ftcd (ENSGACG00000015411) ENSGACG00000015420 ENSGACG00000015422 fzd7a (ENSGACG00000015429) cdk15 (ENSGACG00000015430) ENSGACG00000015433 ENSGACG00000015441 fbxo3 (ENSGACG00000015443) f2 (ENSGACG00000015448) XDH (ENSGACG00000015453) dnajc27 (ENSGACG00000015457) creg1 (ENSGACG00000015462) ENSGACG00000015463 Perciformes_a ANCESTRAL SPECIES 46 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00980000198690.a ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00390000005581.a ENSGT00530000063558.A.c.b ENSGT00940000157308.h ENSGT01100000263476.E.b.a.a.b.a.a ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a ENSGT00980000198678 ENSGT00940000158239.a.b ENSGT00940000158239.b ENSGT00940000159606 ENSGT00390000007225 ENSGT00940000155248.vb.g.b ENSGT00950000182913.A.b.a Channel bull blenny MODERN SPECIES 131 ENSCGOG00000015055 mlpha (ENSCGOG00000015059) ENSCGOG00000015061 ENSCGOG00000015064 dph3 (ENSCGOG00000015067) cdk15 (ENSCGOG00000015074) FZD7 (ENSCGOG00000015104) ENSCGOG00000015108 abi3bpb (ENSCGOG00000015113) ftcd (ENSCGOG00000015118) ENSCGOG00000015147 cd59 (ENSCGOG00000015626) ENSCGOG00000015628 ebpl (ENSCGOG00000015633) arl11 (ENSCGOG00000015635) eef1b2 (ENSCGOG00000015646) ##22 cavin2b (ENSCGOG00000015909) vps16 (ENSCGOG00000015929) rgn (ENSCGOG00000016850) ENSCGOG00000016957 ENSCGOG00000017155 Pike perch MODERN SPECIES 213 ENSSLUG00000008295 ENSSLUG00000008279 rgn (ENSSLUG00000008264) vps16 (ENSSLUG00000007240) cavin2b (ENSSLUG00000007185) ebpl (ENSSLUG00000007179) arl11 (ENSSLUG00000007173) eef1b2 (ENSSLUG00000007163) ##22 ENSSLUG00000007159 ENSSLUG00000007144 ENSSLUG00000007138 cd59 (ENSSLUG00000007084) ftcd (ENSSLUG00000007047) ENSSLUG00000007030 ENSSLUG00000007025 ENSSLUG00000007006 abi3bpb (ENSSLUG00000006953) ENSSLUG00000006933 ENSSLUG00000006922 ENSSLUG00000006914 fzd7a (ENSSLUG00000006798) cdk15 (ENSSLUG00000006770) dph3 (ENSSLUG00000006762) Eupecaria_C ANCESTRAL SPECIES 38 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00390000007225 ENSGT00940000164897.a.b ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00390000005581.a Gilthead seabream MODERN SPECIES 16 ENSSAUG00010027056 ENSSAUG00010027053 ftcd (ENSSAUG00010026993) ENSSAUG00010026955 ENSSAUG00010026952 ENSSAUG00010026950 ENSSAUG00010026948 ENSSAUG00010026942 ENSSAUG00010026940 ENSSAUG00010026936 fzd7a (ENSSAUG00010026928) cdk15 (ENSSAUG00010026921) ENSSAUG00010026912 ebpl (ENSSAUG00010026910) arl11 (ENSSAUG00010026909) eef1b2 (ENSSAUG00010026907) ##22 ENSSAUG00010026906 ENSSAUG00010026905 cd59 (ENSSAUG00010026903) snx9a (ENSSAUG00010026831) ACKR3 (ENSSAUG00010026826) trim63a (ENSSAUG00010026825) ENSSAUG00010026823 mlpha (ENSSAUG00010026821) ENSSAUG00010026819 ENSSAUG00010026817 st6gal2b (ENSSAUG00010026816) ENSSAUG00010026815 dph3 (ENSSAUG00010026814) ENSSAUG00010026812 ENSSAUG00010026776 Eupercaria_incertae_sedis ANCESTRAL SPECIES 76 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000178777 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b European seabass MODERN SPECIES 15 ENSDLAG00005014198 ENSDLAG00005019606 ENSDLAG00005019157 rgn (ENSDLAG00005031710) ENSDLAG00005018781 cavin2b (ENSDLAG00005018750) ENSDLAG00005026337 ##22 ENSDLAG00005034876 ENSDLAG00005033366 ENSDLAG00005027997 ENSDLAG00005033577 ENSDLAG00005026503 st6gal2b (ENSDLAG00005002390) ENSDLAG00005002379 ENSDLAG00005031756 ENSDLAG00005032406 trim63a (ENSDLAG00005028280) ENSDLAG00005032606 ENSDLAG00005004030 ENSDLAG00005008212 ENSDLAG00005030134 ENSDLAG00005030361 Large yellow croaker MODERN SPECIES 86 CDK5R2 (ENSLCRG00005017538) ENSLCRG00005015014 rgn (ENSLCRG00005014929) vps16 (ENSLCRG00005014013) cavin2b (ENSLCRG00005014010) ebpl (ENSLCRG00005014009) ENSLCRG00005014007 arl11 (ENSLCRG00005014006) eef1b2 (ENSLCRG00005013996) ##22 ENSLCRG00005013995 cd59 (ENSLCRG00005013993) snx9a (ENSLCRG00005012475) ACKR3 (ENSLCRG00005012461) trim63a (ENSLCRG00005012460) st6gal2b (ENSLCRG00005012459) ENSLCRG00005012454 ENSLCRG00005012456 mlpha (ENSLCRG00005012451) Tetraodontidae ANCESTRAL SPECIES 26 ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00950000183138.a.b.r.a ENSGT00940000165235.a.a ENSGT00940000155675.p.b ENSGT00950000183140.a.a #25 ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183165.a.a.a ENSGT00950000183165.b.b.b.b ENSGT00940000157360.c Fugu MODERN SPECIES 20 SORCS2 (ENSTRUG00000009401) AFAP1 (ENSTRUG00000009616) ABLIM2 (ENSTRUG00000009795) ENSTRUG00000026830 zcchc4 (ENSTRUG00000010046) ENSTRUG00000031468 pde5ab (ENSTRUG00000010171) mad2l1 (ENSTRUG00000023674) ARSJ (ENSTRUG00000010396) ENSTRUG00000027980 ENSTRUG00000010475 rgn (ENSTRUG00000011178) vps16 (ENSTRUG00000011267) cavin2b (ENSTRUG00000011526) arl11 (ENSTRUG00000011561) eef1b2 (ENSTRUG00000011667) ##22 ENSTRUG00000031847 cd59 (ENSTRUG00000022452) mlpha (ENSTRUG00000011756) ENSTRUG00000011835 ENSTRUG00000032570 ENSTRUG00000013249 #25 pwp2h (ENSTRUG00000013258) ENSTRUG00000013604 ENSTRUG00000029949 ENSTRUG00000027802 gpd2 (ENSTRUG00000002012) ENSTRUG00000033060 ENSTRUG00000030198 inpp4ab (ENSTRUG00000011479) zgc:113142 (ENSTRUG00000011355) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 8 clcn2b (ENSTNIG00000014297) ENSTNIG00000000649 fam131ab (ENSTNIG00000014298) alp3 (ENSTNIG00000014299) ENSTNIG00000014300 psmd2 (ENSTNIG00000014301) prss16 (ENSTNIG00000014302) serpine2 (ENSTNIG00000014303) wdfy1 (ENSTNIG00000014304) dhrs12la (ENSTNIG00000014305) AP1S3 (ENSTNIG00000014306) ENSTNIG00000014307 kcne4 (ENSTNIG00000014308) acsl3a (ENSTNIG00000014309) farsb (ENSTNIG00000014310) eef1b2 (ENSTNIG00000014311) ##22 SGPP2 (ENSTNIG00000014312) pax3b (ENSTNIG00000014313) epha4a (ENSTNIG00000014314) pxylp1 (ENSTNIG00000014315) ENSTNIG00000014316 spsb4a (ENSTNIG00000014317) ENSTNIG00000014318 lpar5b (ENSTNIG00000014319) RBP2 (ENSTNIG00000014320) foxl2b (ENSTNIG00000014321) PIK3CB (ENSTNIG00000014322) PER2 (ENSTNIG00000014323) her13 (ENSTNIG00000014324) her8.2 (ENSTNIG00000000385) ENSTNIG00000014325 Tetraodon MODERN SPECIES 18 gpd2 (ENSTNIG00000010617) ENSTNIG00000010616 ENSTNIG00000010615 ATP7B (ENSTNIG00000010614) eed (ENSTNIG00000001661) pwp2h (ENSTNIG00000010613) ENSTNIG00000010612 #25 ENSTNIG00000010611 ENSTNIG00000010610 mlpha (ENSTNIG00000010609) ENSTNIG00000010608 ENSTNIG00000019444 RGN (ENSTNIG00000010607) vps16 (ENSTNIG00000010606) arl11 (ENSTNIG00000010605) eef1b2 (ENSTNIG00000010604) ##22 cd59 (ENSTNIG00000010603) Percomorphaceae_D ANCESTRAL SPECIES 27 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00940000167421 ENSGT00940000168428.b.a ENSGT00940000177273 ENSGT00940000168428.b.b.b ENSGT00940000154067.c ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00940000158239.a.a.a.b ENSGT00940000164897.a.b ENSGT00390000007225 Anabantaria ANCESTRAL SPECIES 39 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00940000158714.c ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT00390000005581.a ENSGT00940000159169 ENSGT00530000063558.A.c.b ENSGT00530000063503.a.a.a ENSGT00940000157308.h ENSGT01030000235241 Zig-zag eel MODERN SPECIES 45 ENSMAMG00000003972 ENSMAMG00000003953 ENSMAMG00000003944 ENSMAMG00000002893 ##22 ENSMAMG00000002848 ENSMAMG00000002835 ENSMAMG00000002728 ENSMAMG00000002489 ENSMAMG00000002461 ENSMAMG00000024386 Anabantoidei ANCESTRAL SPECIES 28 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT00940000158239.a.b ENSGT00940000159606 ENSGT00390000005581.a ENSGT00940000159169 ENSGT00530000063558.A.c.b ENSGT00920000150296 ENSGT00530000063503.a.a.a ENSGT00940000157308.h Climbing perch MODERN SPECIES 11 ENSATEG00000007065 ENSATEG00000007079 rgn (ENSATEG00000007169) ENSATEG00000007190 ENSATEG00000007199 cavin2b (ENSATEG00000007204) ENSATEG00000007214 ENSATEG00000007233 ##22 ENSATEG00000007276 ENSATEG00000007319 ENSATEG00000007350 ENSATEG00000007628 ENSATEG00000007677 ENSATEG00000007735 ENSATEG00000007873 ENSATEG00000007985 ENSATEG00000008004 ENSATEG00000008013 ENSATEG00000008021 abi3bpb (ENSATEG00000008126) ENSATEG00000008265 ENSATEG00000008317 ENSATEG00000025264 Siamese fighting fish MODERN SPECIES 10 ENSBSLG00000006622 ENSBSLG00000006643 ENSBSLG00000006677 ENSBSLG00000006735 lipt1 (ENSBSLG00000006777) ENSBSLG00000006828 bco1l (ENSBSLG00000007169) ENSBSLG00000007729 pomca (ENSBSLG00000007860) ENSBSLG00000008009 rgn (ENSBSLG00000009974) vps16 (ENSBSLG00000009992) cavin2b (ENSBSLG00000010062) ebpl (ENSBSLG00000010083) arl11 (ENSBSLG00000010091) eef1b2 (ENSBSLG00000010108) ##22 ENSBSLG00000010154 trim63a (ENSBSLG00000010195) mlpha (ENSBSLG00000010198) ENSBSLG00000010218 ENSBSLG00000010237 ENSBSLG00000010245 dph3 (ENSBSLG00000010249) fzd7a (ENSBSLG00000010253) ftcd (ENSBSLG00000010269) ENSBSLG00000010309 abi3bpb (ENSBSLG00000010329) ENSBSLG00000010425 ENSBSLG00000010433 IMPG2 (ENSBSLG00000010443) ENSBSLG00000010456 Carangaria ANCESTRAL SPECIES 38 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00940000167421 ENSGT00940000168428.b.a ENSGT00940000177273 ENSGT00940000168428.b.b.b ENSGT00940000154067.c ENSGT01090000260051.b.b.dc.a ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a Carangaria_A ANCESTRAL SPECIES 114 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g Seriola ANCESTRAL SPECIES 71 ENSGT00390000008812.a.b ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00940000168428.b.a ENSGT00940000154067.c ENSGT01090000260051.b.b.dc.a ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT01030000235464 ENSGT00940000164897.a.b ENSGT00940000158239.a.b ENSGT00940000159606 Yellowtail amberjack MODERN SPECIES 3118 ENSSLDG00000010033 rps24 (ENSSLDG00000010022) cdk5r2a (ENSSLDG00000010009) ENSSLDG00000009948 rgn (ENSSLDG00000009907) vps16 (ENSSLDG00000009858) cavin2b (ENSSLDG00000009807) EBPL (ENSSLDG00000009776) arl11 (ENSSLDG00000009763) ENSSLDG00000009701 eef1b2 (ENSSLDG00000009674) ##22 dytn (ENSSLDG00000009636) cd59 (ENSSLDG00000009620) ENSSLDG00000009560 ACKR3 (ENSSLDG00000009542) ENSSLDG00000009468 mlpha (ENSSLDG00000009436) Greater amberjack MODERN SPECIES 152 cdk5r2a (ENSSDUG00000005352) ENSSDUG00000004654 rgn (ENSSDUG00000004611) vps16 (ENSSDUG00000004508) cavin2b (ENSSDUG00000004448) ebpl (ENSSDUG00000004433) arl11 (ENSSDUG00000004422) ENSSDUG00000004389 eef1b2 (ENSSDUG00000004353) ##22 dytn (ENSSDUG00000004316) cd59 (ENSSDUG00000004301) ENSSDUG00000004082 ENSSDUG00000004020 ACKR3 (ENSSDUG00000004012) ENSSDUG00000003894 mlpha (ENSSDUG00000003860) trim63a (ENSSDUG00000003824) ST6GAL2 (ENSSDUG00000003809) ENSSDUG00000003746 ENSSDUG00000003722 ENSSDUG00000003717 fzd7a (ENSSDUG00000003714) cdk15 (ENSSDUG00000003687) ftcd (ENSSDUG00000003648) Barramundi perch MODERN SPECIES 42 cdk5r2a (ENSLCAG00010026518) ENSLCAG00010026592 rgn (ENSLCAG00010026706) vps16 (ENSLCAG00010026708) cavin2b (ENSLCAG00010026714) ebpl (ENSLCAG00010026716) arl11 (ENSLCAG00010026725) eef1b2 (ENSLCAG00010026736) ##22 ENSLCAG00010026745 ENSLCAG00010026752 snx9a (ENSLCAG00010026755) iqca1 (ENSLCAG00010026758) ACKR3 (ENSLCAG00010026759) trim63a (ENSLCAG00010026760) LRRFIP1 (ENSLCAG00010026766) ENSLCAG00010026783 ENSLCAG00010026785 ENSLCAG00010026787 ENSLCAG00010026788 ENSLCAG00010026789 Pleuronectoidei ANCESTRAL SPECIES 113 ENSGT00940000155515.a.a ENSGT00390000014995 ENSGT00390000003896 ENSGT00950000182910.a.a.d ENSGT00530000063715.b ENSGT00940000166383 ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00730000111696.a ENSGT00940000156557.g ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.b.a Turbot MODERN SPECIES ENSSMAG00000030099 ENSSMAG00000000002 rgn (ENSSMAG00000026915) ENSSMAG00000000003 cavin2b (ENSSMAG00000000004) ENSSMAG00000000006 ENSSMAG00000000005 ENSSMAG00000000007 ##22 ENSSMAG00000031129 ENSSMAG00000024723 ENSSMAG00000000012 ENSSMAG00000000014 ENSSMAG00000000015 ENSSMAG00000035088 ENSSMAG00000000016 ENSSMAG00000000013 ENSSMAG00000000017 ENSSMAG00000025992 ENSSMAG00000000021 ENSSMAG00000027380 ENSSMAG00000000022 ENSSMAG00000000023 ENSSMAG00000000025 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 271 ENSCSEG00000007600 ENSCSEG00000007596 ##22 Tongue sole MODERN SPECIES 5 chd1 (ENSCSEG00000009553) megf10 (ENSCSEG00000009495) pmpcb (ENSCSEG00000009485) ENSCSEG00000009468 prrc1 (ENSCSEG00000009455) fbxw2 (ENSCSEG00000009422) derl2 (ENSCSEG00000009397) SCAI (ENSCSEG00000009360) gbx2 (ENSCSEG00000009352) AGAP1 (ENSCSEG00000009268) ENSCSEG00000009239 INHBB (ENSCSEG00000009232) ENSCSEG00000009207 ebpl (ENSCSEG00000009172) arl11 (ENSCSEG00000009161) eef1b2 (ENSCSEG00000009151) ##22 ENSCSEG00000009143 ENSCSEG00000009127 mlpha (ENSCSEG00000009091) ENSCSEG00000009064 ENSCSEG00000009060 ENSCSEG00000009053 ftcd (ENSCSEG00000009019) abi3bpb (ENSCSEG00000008989) ENSCSEG00000008956 senp7b (ENSCSEG00000008894) clcn4 (ENSCSEG00000008841) ENSCSEG00000008797 vps16 (ENSCSEG00000008772) ENSCSEG00000008628 ENSCSEG00000008612 Cod MODERN SPECIES 17 ENSGMOG00000000913 ENSGMOG00000014708 ENSGMOG00000012515 ##22 ENSGMOG00000024628 ENSGMOG00000002031 ENSGMOG00000018265 ENSGMOG00000006432 ENSGMOG00000002115 ENSGMOG00000030142 ENSGMOG00000009664 ENSGMOG00000023756 ENSGMOG00000012931 ENSGMOG00000010602 ENSGMOG00000015929 ENSGMOG00000030726 ENSGMOG00000022736 ENSGMOG00000001754 ENSGMOG00000000107 Protacanthopterygii ANCESTRAL SPECIES 66 ENSGT00990000204351 ENSGT00940000155749.d ENSGT00390000004056 ENSGT00510000047334 ENSGT00940000153695.B ENSGT00390000018525.a.b.e.a ENSGT00940000160000 ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ENSGT00940000155248.vb.f ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00980000202691 ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000156186.l.a ENSGT00940000168325 ENSGT00950000183140.a.a #25 ENSGT01000000220465 ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000161625.m Salmoninae ANCESTRAL SPECIES 57 ENSGT01000000214434.B.a.b.a ENSGT00990000204351 ENSGT00940000155749.d ENSGT00390000004056 ENSGT00510000047334 ENSGT00940000153695.B.d ENSGT00940000160000.e ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a.g.b ENSGT00390000008812.a.b.c.a ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00970000193449 ENSGT00940000179271 ENSGT00940000178777 ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000165235.a.a.b ENSGT00940000156186.l.a.c ENSGT00940000168325 ENSGT00950000183140.a.a #25 ENSGT01000000220465 ENSGT00950000182910.a.a.d ENSGT00390000003896.f ENSGT00390000014995.l ENSGT00940000178870 Salmoninae_a ANCESTRAL SPECIES 59 ENSGT00940000155749.d ENSGT00390000004056 ENSGT00510000047334 ENSGT00940000153695.B.d ENSGT00940000160000.e ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a.h.a.a ENSGT00940000155515.a.a.h.a.b ENSGT00390000008812.a.b.c.b ENSGT00940000155248.vb.e ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g ENSGT00950000183014.f.a ##22 ENSGT00940000162403 ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000165235.a.a.b ENSGT00940000156186.l.a.c ENSGT00530000064359.c.b.n ENSGT00940000164697.b.m.b ENSGT00940000154645.B.d ENSGT00940000155675.p.b ENSGT00950000183140.a.a #25 ENSGT00940000156056.A.j ENSGT00950000182910.a.a.d ENSGT00390000003896.e ENSGT00390000014995.k ENSGT00940000161625.m.c Salmo DUPLICATION Salmo ANCESTRAL SPECIES 241 ENSGT00390000017916.c ENSGT00940000155515.a.a.g.b ENSGT00390000008812.a.b.d ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g ENSGT00950000183014.f.a.w ##22 ENSGT00940000178777 ENSGT00390000006826.f ENSGT00940000165235.a.a.b.a River trout MODERN SPECIES 32 ATP7B (ENSSTUG00000040444) hikeshi (ENSSTUG00000040334) eed (ENSSTUG00000040198) ENSSTUG00000040166 ENSSTUG00000040149 ENSSTUG00000040145 sft2d2b (ENSSTUG00000040141) ENSSTUG00000040133 ENSSTUG00000040125 ENSSTUG00000040103 ENSSTUG00000040098 ENSSTUG00000040095 ENSSTUG00000040050 ENSSTUG00000040037 arl6ip6 (ENSSTUG00000040033) eef1b2 (ENSSTUG00000039946) ##22 ndufs1 (ENSSTUG00000039871) ENSSTUG00000039539 vps16 (ENSSTUG00000038908) rgn (ENSSTUG00000038871) zgc:112023 (ENSSTUG00000038839) nabp1b (ENSSTUG00000038834) ENSSTUG00000038828 MPC2 (ENSSTUG00000044906) ENSSTUG00000044865 SLC19A2 (ENSSTUG00000044858) atg3 (ENSSTUG00000044814) ENSSTUG00000044801 faimb (ENSSTUG00000044778) AGAP1 (ENSSTUG00000042119) gbx2 (ENSSTUG00000042014) Atlantic salmon MODERN SPECIES 8 ENSSSAG00000012823 ENSSSAG00000007072 ENSSSAG00000006987 ENSSSAG00000114830 ENSSSAG00000099614 ENSSSAG00000121919 ENSSSAG00000106943 ENSSSAG00000082954 ENSSSAG00000006972 ENSSSAG00000044440 ENSSSAG00000089218 ENSSSAG00000098018 ENSSSAG00000109371 ENSSSAG00000099867 ENSSSAG00000041206 ENSSSAG00000042864 ##22 ENSSSAG00000042848 zswim2 (ENSSSAG00000090849) ENSSSAG00000007434 ENSSSAG00000109146 ENSSSAG00000095702 ENSSSAG00000081759 ENSSSAG00000042777 #25 ENSSSAG00000101211 ENSSSAG00000010129 vps16 (ENSSSAG00000042745) ENSSSAG00000017401 zgc:112023 (ENSSSAG00000017212) ENSSSAG00000084740 ENSSSAG00000106927 ENSSSAG00000015933 Salmo ANCESTRAL SPECIES 151 ENSGT00950000183038.a.b.b.b.r.e ENSGT00390000001718.b.b.a.a ENSGT01000000221844 ENSGT01000000214434.B.a.b.b ENSGT00990000204351.b ENSGT00940000155749.d.db ENSGT00940000153695.B.c.b ENSGT00940000156207.b.c.a.b.b.b ENSGT00940000156207.b.c.b.a.a.b ENSGT00940000156207.b.c.b.a.a.a ENSGT00390000018525.a.b.e.a.g ENSGT00940000160000.f ENSGT00390000017916.d ENSGT00940000155515.a.a.g.a ENSGT00940000153514.b.m.b.h ENSGT00950000183014.f.a.x ##22 ENSGT00940000162403 ENSGT00390000006826.e ENSGT00940000165235.a.a.a ENSGT00940000156186.l.a.c ENSGT00530000064359.c.b.n.h ENSGT00950000183140.a.a.i.a #25 Atlantic salmon MODERN SPECIES 7 ENSSSAG00000046298 ENSSSAG00000046310 ENSSSAG00000046459 ENSSSAG00000033202 sft2d2b (ENSSSAG00000093441) ENSSSAG00000109602 ENSSSAG00000054519 ENSSSAG00000101961 ENSSSAG00000092634 ENSSSAG00000118756 ENSSSAG00000017658 ENSSSAG00000113561 ENSSSAG00000041229 arl6ip6 (ENSSSAG00000041213) ndufs1 (ENSSSAG00000042889) eef1b2 (ENSSSAG00000041178) ##22 dytn (ENSSSAG00000041139) ENSSSAG00000041061 ENSSSAG00000009203 ENSSSAG00000042710 ENSSSAG00000010250 ENSSSAG00000100401 ENSSSAG00000052189 #25 ENSSSAG00000117507 ENSSSAG00000099607 vps16 (ENSSSAG00000010147) ENSSSAG00000091366 ENSSSAG00000008145 ENSSSAG00000017087 ENSSSAG00000095768 ENSSSAG00000015899 River trout MODERN SPECIES 36 ENSSTUG00000017764 ENSSTUG00000018432 ATP7B (ENSSTUG00000018499) hikeshi (ENSSTUG00000021976) eed (ENSSTUG00000021992) ENSSTUG00000022172 ENSSTUG00000022200 ENSSTUG00000022212 sft2d2b (ENSSTUG00000022216) ENSSTUG00000022239 ENSSTUG00000022260 ENSSTUG00000022271 ENSSTUG00000022288 arl6ip6 (ENSSTUG00000022298) ndufs1 (ENSSTUG00000022318) eef1b2 (ENSSTUG00000022511) ##22 dytn (ENSSTUG00000022550) zswim2 (ENSSTUG00000022558) ENSSTUG00000022579 GULP1 (ENSSTUG00000023168) ENSSTUG00000023389 ENSSTUG00000023400 ENSSTUG00000023408 #25 vps16 (ENSSTUG00000023447) rgn (ENSSTUG00000023598) zgc:112023 (ENSSTUG00000023704) nabp1b (ENSSTUG00000023787) ENSSTUG00000023794 MPC2 (ENSSTUG00000023826) ENSSTUG00000023832 SLC19A2 (ENSSTUG00000023860) Oncorhynchus ANCESTRAL SPECIES 66 ENSGT00940000156207.b.c.b.a.a.b ENSGT00940000156207.b.c.b.a.a.a ENSGT00390000018525.a.b.e.a ENSGT00940000160000.f ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a.h.a.a ENSGT00940000155515.a.a.h.a.b ENSGT00390000008812.a.b.c.b ENSGT00940000155248.vb.e ENSGT01060000253578 ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g.d ENSGT00950000183014.f.a ##22 ENSGT00940000162403.c ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000156186.l.a.c ENSGT00940000155675.p.b ENSGT00950000183140.a.a.k.b #25 ENSGT00940000156056.A.j.c ENSGT00950000182910.a.a.d ENSGT00390000003896.e ENSGT00390000014995.k ENSGT00940000161625.m.c ENSGT00940000155812.u.b ENSGT00510000047120.gb.f.a.b ENSGT00950000182900.C.ib ENSGT00950000183022.a.b Oncorhynchus_a ANCESTRAL SPECIES 148 ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g.d ENSGT00950000183014.f.a ##22 ENSGT00940000162403.c ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000156186.l.a.c ENSGT00940000155675.p.b ENSGT00950000183140.a.a.k.b #25 ENSGT00940000156056.A.j.c ENSGT00950000182910.a.a.d ENSGT00390000003896.e ENSGT00390000014995.k ENSGT00940000161625.m.c ENSGT00940000155812.u.b ENSGT00510000047120.gb.f.a.b ENSGT00950000182900.C.ib ENSGT00950000183022.a.b Coho salmon DUPLICATION Coho salmon MODERN SPECIES 25 ENSOKIG00005000842 cybb (ENSOKIG00005000822) ENSOKIG00005000802 rpgrb (ENSOKIG00005000795) TSPAN7 (ENSOKIG00005000787) mid1ip1b (ENSOKIG00005000785) ENSOKIG00005000782 ENSOKIG00005000773 ENSOKIG00005000768 ENSOKIG00005000761 ENSOKIG00005000758 ENSOKIG00005000747 ENSOKIG00005000735 arl6ip6 (ENSOKIG00005000730) ndufs1 (ENSOKIG00005000698) eef1b2 (ENSOKIG00005000679) ##22 dytn (ENSOKIG00005000663) ENSOKIG00005000643 ENSOKIG00005000316 ENSOKIG00005000027 GULP1 (ENSOKIG00005000009) Coho salmon MODERN SPECIES 1312 ENSOKIG00005047838 ENSOKIG00005047833 arl6ip6 (ENSOKIG00005047830) ndufs1 (ENSOKIG00005047718) eef1b2 (ENSOKIG00005047702) ##22 dytn (ENSOKIG00005047680) zswim2 (ENSOKIG00005047663) ENSOKIG00005046885 GULP1 (ENSOKIG00005046824) ENSOKIG00005046820 ENSOKIG00005046806 ENSOKIG00005046786 #25 ENSOKIG00005046767 cavin2b (ENSOKIG00005046760) vps16 (ENSOKIG00005046709) rgn (ENSOKIG00005046694) zgc:112023 (ENSOKIG00005046682) nabp1b (ENSOKIG00005046676) ENSOKIG00005046674 MPC2 (ENSOKIG00005046664) Chinook salmon MODERN SPECIES 978 ENSOTSG00005023236 ENSOTSG00005023238 ndufs1 (ENSOTSG00005023239) eef1b2 (ENSOTSG00005023240) ##22 ENSOTSG00005023242 ENSOTSG00005023243 ENSOTSG00005023244 Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 9 ENSOMYG00000076427 ENSOMYG00000013419 ENSOMYG00000013438 ENSOMYG00000013450 sft2d2b (ENSOMYG00000065190) ENSOMYG00000056166 ENSOMYG00000067658 ENSOMYG00000057369 ENSOMYG00000010509 ENSOMYG00000010566 ENSOMYG00000076187 ENSOMYG00000066169 ENSOMYG00000004303 arl6ip6 (ENSOMYG00000057345) ndufs1 (ENSOMYG00000004516) eef1b2 (ENSOMYG00000004672) ##22 dytn (ENSOMYG00000054532) ENSOMYG00000066384 zswim2 (ENSOMYG00000072822) ENSOMYG00000063065 ENSOMYG00000002083 ENSOMYG00000008966 ENSOMYG00000058069 ENSOMYG00000008893 #25 ENSOMYG00000054145 ENSOMYG00000066202 ENSOMYG00000008833 vps16 (ENSOMYG00000008747) ENSOMYG00000069912 zgc:112023 (ENSOMYG00000008315) ENSOMYG00000008669 Rainbow trout MODERN SPECIES 28 ENSOMYG00000010228 ENSOMYG00000055017 sft2d2b (ENSOMYG00000056798) ENSOMYG00000049924 ENSOMYG00000010393 ENSOMYG00000010486 ENSOMYG00000010528 ENSOMYG00000059170 ENSOMYG00000062129 ENSOMYG00000052582 ENSOMYG00000055796 ENSOMYG00000004263 ENSOMYG00000049709 ENSOMYG00000063072 ndufs1 (ENSOMYG00000010601) ENSOMYG00000004733 ##22 dytn (ENSOMYG00000011498) zswim2 (ENSOMYG00000010719) ENSOMYG00000054179 ENSOMYG00000011018 ENSOMYG00000011506 ENSOMYG00000002013 ENSOMYG00000001987 #25 ENSOMYG00000054561 ENSOMYG00000030528 vps16 (ENSOMYG00000008526) rgn (ENSOMYG00000008411) zgc:112023 (ENSOMYG00000008172) ENSOMYG00000074108 ENSOMYG00000057202 ENSOMYG00000054823 Huchen MODERN SPECIES 3924 ENSHHUG00000047378 ENSHHUG00000047379 ENSHHUG00000047383 arl6ip6 (ENSHHUG00000047385) ENSHHUG00000047388 ndufs1 (ENSHHUG00000047391) eef1b2 (ENSHHUG00000047418) ##22 ENSHHUG00000047444 ENSHHUG00000047447 ENSHHUG00000047451 zswim2 (ENSHHUG00000047455) Northern pike MODERN SPECIES 21 eed (ENSELUG00000001896) ENSELUG00000001900 ENSELUG00000001909 ENSELUG00000001903 sft2d2b (ENSELUG00000001914) ENSELUG00000001301 iqcb1 (ENSELUG00000001921) ENSELUG00000001926 ENSELUG00000001957 cdk5r2a (ENSELUG00000001981) ENSELUG00000001996 ENSELUG00000002002 ENSELUG00000002006 ENSELUG00000002008 ndufs1 (ENSELUG00000002014) eef1b2 (ENSELUG00000002024) ##22 ENSELUG00000002029 ENSELUG00000029434 zswim2 (ENSELUG00000002031) ENSELUG00000002039 GULP1 (ENSELUG00000002071) ENSELUG00000002079 ENSELUG00000030203 ENSELUG00000002089 ENSELUG00000030053 dnpep (ENSELUG00000002103) PTPRN (ENSELUG00000002114) ENSELUG00000002120 bin1b (ENSELUG00000002132) ihhb (ENSELUG00000033121) nhej1 (ENSELUG00000002139) Otomorpha ANCESTRAL SPECIES 393 ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00950000183014.f.a ##22 ENSGT00970000193449 ENSGT00440000037606.b ENSGT00940000158781.f ENSGT00940000162403 ENSGT00940000178777 ENSGT00940000164225 ENSGT00940000166591 ENSGT00940000154101.a ENSGT00940000158887 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 Otophysi ANCESTRAL SPECIES 49 ENSGT00940000155522.g.b ENSGT00390000016940.c.b.b ENSGT00940000160306.o.a ENSGT00390000008812.a.b ENSGT01050000244857.B.b.g ENSGT00940000159052.m.b.b ENSGT00940000157018.i.b ENSGT01030000234748.b ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00440000037606.b ENSGT00940000158781.f ENSGT00940000162403 ENSGT00940000164225 ENSGT00940000166591 ENSGT00940000154101.a ENSGT00940000158887 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 Characiphysae ANCESTRAL SPECIES 34 ENSGT00390000003164 ENSGT00940000155522.g.b ENSGT00390000016940.c.b.b ENSGT00940000160306.o.a ENSGT00390000008812.a.b ENSGT01050000244857.B.b.g ENSGT00940000159052.m.b.b ENSGT00940000157018.i.b ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00440000037606.b ENSGT00940000158781.f ENSGT00940000162403 ENSGT00940000164225.y ENSGT00940000166591 ENSGT00940000154101.a ENSGT00940000158887 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 ENSGT01050000244824.D.b ENSGT01050000244848.C.b ENSGT00940000154774 ENSGT00940000154516.a.a ENSGT00940000156146.`b.b ENSGT00940000155331.A.f Channel catfish MODERN SPECIES 3 ENSIPUG00000013082 chpf (ENSIPUG00000013105) asic4 (ENSIPUG00000013144) ENSIPUG00000013184 ENSIPUG00000013188 gmppa (ENSIPUG00000013225) ENSIPUG00000013370 MYLK (ENSIPUG00000013381) ENSIPUG00000013416 arl6ip6 (ENSIPUG00000013535) ENSIPUG00000013567 rprmb (ENSIPUG00000013616) KCNJ3 (ENSIPUG00000013622) ino80db (ENSIPUG00000013638) ndufs1 (ENSIPUG00000013659) eef1b2 (ENSIPUG00000013694) ##22 ENSIPUG00000013760 ENSIPUG00000013772 adam23 (ENSIPUG00000013806) casp8 (ENSIPUG00000013783) dytn (ENSIPUG00000013845) casp20 (ENSIPUG00000013871) catip (ENSIPUG00000013888) pnkd (ENSIPUG00000013907) ube2o (ENSIPUG00000013940) ENSIPUG00000014017 aanat (ENSIPUG00000014037) rhbdf2 (ENSIPUG00000014071) Acox1 (ENSIPUG00000014161) ten1 (ENSIPUG00000014240) evpl (ENSIPUG00000014268) Characiphysae_b ANCESTRAL SPECIES 50 ENSGT00940000155522.g.b ENSGT00390000016940.c.b.b ENSGT00940000160306.o.a ENSGT00390000008812.a.b ENSGT00940000159281 ENSGT01050000244857.B.b.g ENSGT00940000159052.m.b.b ENSGT00940000157018.i.b ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00440000037606.b ENSGT00940000158781.f ENSGT00940000162403 ENSGT00940000164225.y ENSGT00940000166591 ENSGT00940000164225.z ENSGT00940000154101.a ENSGT00940000158887 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 ENSGT01050000244824.D.b ENSGT01050000244848.C.b ENSGT00940000154774 ENSGT00940000154516.a.a ENSGT00940000156146.`b.b Characoidei ANCESTRAL SPECIES 44 ENSGT00940000155522.g.b ENSGT00390000016940.c.b.b ENSGT00940000160306.o.a ENSGT00390000008812.a.b ENSGT01050000244857.B.b.g ENSGT00940000159052.n ENSGT01030000234748.b ENSGT00940000157018.i.b ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00440000037606.b ENSGT00940000158781.f ENSGT00940000162403 ENSGT00940000164225.y ENSGT00940000166591 ENSGT00940000154101.a ENSGT00940000158887 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 Red-bellied piranha MODERN SPECIES 579 JARID2 (ENSPNAG00000008972) dtnbp1a (ENSPNAG00000001263) mylipb (ENSPNAG00000008908) ATXN1 (ENSPNAG00000001226) ino80db (ENSPNAG00000008879) ndufs1 (ENSPNAG00000008859) eef1b2 (ENSPNAG00000001207) ##22 ADAM23 (ENSPNAG00000001201) dytn (ENSPNAG00000001178) casp20 (ENSPNAG00000008713) casp20 (ENSPNAG00000005930) casp20 (ENSPNAG00000001157) casp8 (ENSPNAG00000008676) catip (ENSPNAG00000001141) pnkd (ENSPNAG00000008655) Mexicana tetra MODERN SPECIES 4 mtss1 (ENSAMXG00000039365) mych (ENSAMXG00000034846) romo1 (ENSAMXG00000009812) ergic3 (ENSAMXG00000009793) ENSAMXG00000030041 EIF2S2 (ENSAMXG00000040852) asip1 (ENSAMXG00000032161) ENSAMXG00000033300 ENSAMXG00000015213 arl6ip6 (ENSAMXG00000035122) rprmb (ENSAMXG00000024814) KCNJ3 (ENSAMXG00000015315) ino80db (ENSAMXG00000038619) ndufs1 (ENSAMXG00000015335) ENSAMXG00000030270 eef1b2 (ENSAMXG00000030818) ##22 ENSAMXG00000034650 ADAM23 (ENSAMXG00000015410) dytn (ENSAMXG00000015497) casp20 (ENSAMXG00000029860) casp20 (ENSAMXG00000015579) casp8 (ENSAMXG00000015634) catip (ENSAMXG00000015679) pnkd (ENSAMXG00000043305) tmbim1a (ENSAMXG00000029201) ENSAMXG00000041875 mcm6 (ENSAMXG00000015786) ENSAMXG00000015818 ENSAMXG00000004610 ENSAMXG00000038142 ical1 (ENSAMXG00000015858) Electric eel MODERN SPECIES 81 dnpep (ENSEEEG00000019637) desmb (ENSEEEG00000019720) tmem198b (ENSEEEG00000019721) cdk5r2a (ENSEEEG00000019722) ENSEEEG00000019724 CHPF (ENSEEEG00000019725) asic4b (ENSEEEG00000019728) gmppab (ENSEEEG00000019738) MYLK (ENSEEEG00000019756) ENSEEEG00000019759 arl6ip6 (ENSEEEG00000019762) rprmb (ENSEEEG00000019763) KCNJ3 (ENSEEEG00000019764) ino80db (ENSEEEG00000019765) ndufs1 (ENSEEEG00000019771) eef1b2 (ENSEEEG00000019878) ##22 ADAM23 (ENSEEEG00000019885) dytn (ENSEEEG00000019887) casp20 (ENSEEEG00000019888) casp8 (ENSEEEG00000019890) mcm7 (ENSEEEG00000019897) ENSEEEG00000019948 COPS6 (ENSEEEG00000019949) CRMP1 (ENSEEEG00000019964) CYTL1 (ENSEEEG00000020158) msx1a (ENSEEEG00000020159) stx18 (ENSEEEG00000020160) NSG1 (ENSEEEG00000020164) Cyprinoidei ANCESTRAL SPECIES 51 ENSGT00390000003164 ENSGT00940000155522.g.b ENSGT00390000016940.c.b.b ENSGT00940000160306.o.a ENSGT00390000008812.a.b ENSGT01050000244857.B.b.g ENSGT00940000159052.m.b.b ENSGT00940000157018.i.b ENSGT01030000234748.b ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00950000183014.f.a ##22 ENSGT00940000158781.f ENSGT00940000162403 ENSGT00940000164225 ENSGT00940000166591 ENSGT00970000193449 ENSGT00940000154101.a ENSGT00940000158887 ENSGT01050000244890.a.b.a.i.a ENSGT00530000065055 ENSGT01050000244824.D.b.ib ENSGT01050000244848.C.a.h ENSGT00390000005530.a.a ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a ENSGT00940000155972.A Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 20 ENSGT00390000016940.c.b.b.a.b ENSGT00940000160306.o.a.a.b ENSGT00390000008812.a.b.a ENSGT00940000159281.j ENSGT01050000244857.B.b.g.b ENSGT00940000159052.m.b.b.a ENSGT00940000157018.i.b.b ENSGT01030000234748.b.a ENSGT00940000157879.xb ENSGT00940000157879.yb.a.b ENSGT00940000155515.a.a.b ENSGT00390000010523.c.b.g.b.b ENSGT01080000257365.b.a.a.b.a.y.a.b ENSGT00940000157974.h.b ENSGT00940000153514.b.m.b.a ENSGT00950000183014.f.a.bb ##22 ENSGT00970000193449 ENSGT00940000158781.f.b ENSGT00940000162403.b ENSGT00940000164225.ab.b.a ENSGT00940000166591.c ENSGT00940000154101.a.b ENSGT00940000158887.c ENSGT01050000244890.a.b.a.i.a.b ENSGT00530000065055.e ENSGT01050000244824.D.b.ib.a ENSGT01050000244848.C.a.h.c ENSGT00390000005530.a.a.n ENSGT00950000183046.a.a.gb.e ENSGT00940000156449.b.a.g ENSGT00940000155972.A.i Goldfish MODERN SPECIES 24 desmb (ENSCARG00000017612) tmem198b (ENSCARG00000017682) cryba2a (ENSCARG00000017697) cdk5r2a (ENSCARG00000017715) asic4b (ENSCARG00000017730) gmppab (ENSCARG00000017805) ENSCARG00000017855 ENSCARG00000017867 ENSCARG00000017882 ENSCARG00000017989 ENSCARG00000018553 rprmb (ENSCARG00000018580) KCNJ3 (ENSCARG00000018583) ino80db (ENSCARG00000018599) ndufs1 (ENSCARG00000018650) eef1b2 (ENSCARG00000019419) ##22 ENSCARG00000019432 ADAM23 (ENSCARG00000019471) casp20 (ENSCARG00000020011) casp8 (ENSCARG00000020017) pnkd (ENSCARG00000020048) tmbim1a (ENSCARG00000020309) si:ch73-71c20.5 (ENSCARG00000020329) mcm6 (ENSCARG00000020347) cxcr4a (ENSCARG00000020702) ical1 (ENSCARG00000020718) FAM117B (ENSCARG00000020761) bmpr2a (ENSCARG00000020801) ENSCARG00000021667 slc15a1b (ENSCARG00000022333) stk24b (ENSCARG00000022990) Cyprininae_a ANCESTRAL SPECIES 13 ENSGT00940000155522.g.b.j ENSGT00390000016940.c.b.b.a.a ENSGT00940000160306.o.a.a.a ENSGT00390000008812.a.b.b ENSGT00940000159281.j.a ENSGT01050000244857.B.b.g.b ENSGT00940000159052.m.b.b.a ENSGT01030000234748.b.a ENSGT00940000157018.i.b.b ENSGT00940000157879.yb.a.b ENSGT00940000155515.a.a.b ENSGT00390000010523.c.b.g.b.b ENSGT01080000257365.b.a.a.b.a.y.a.b ENSGT00940000157974.h.b ENSGT00940000153514.b.m.b.a ENSGT00950000183014.f.a.bb ##22 ENSGT00970000193449 ENSGT00940000158781.f.b ENSGT00940000162403.b ENSGT00940000164225.ab.b.a ENSGT00940000166591.c ENSGT00940000154101.a.b ENSGT00940000158887.c ENSGT01050000244890.a.b.a.i.a.b ENSGT00530000065055.e ENSGT01050000244824.D.b.ib.a ENSGT01050000244848.C.a.h.c ENSGT00390000005530.a.a.n ENSGT00950000183046.a.a.gb.e ENSGT00940000156449.b.a.g ENSGT00940000155972.A.i Common carp reference MODERN SPECIES 16 dnpep (ENSCCRG00000033549) desmb (ENSCCRG00000014543) tmem198b (ENSCCRG00000065674) cryba2a (ENSCCRG00000014449) cdk5r2a (ENSCCRG00000014962) ENSCCRG00000079745 ENSCCRG00000014425 asic4b (ENSCCRG00000043321) ENSCCRG00000002863 gmppab (ENSCCRG00000066120) ENSCCRG00000026180 ENSCCRG00000037061 rprmb (ENSCCRG00000030067) ENSCCRG00000060682 ino80db (ENSCCRG00000002484) eef1b2 (ENSCCRG00000002495) ##22 ndufs1 (ENSCCRG00000059554) ADAM23 (ENSCCRG00000021237) dytn (ENSCCRG00000022242) casp20 (ENSCCRG00000008807) casp8 (ENSCCRG00000022248) catip (ENSCCRG00000022255) pnkd (ENSCCRG00000047996) tmbim1a (ENSCCRG00000038219) si:ch73-71c20.5 (ENSCCRG00000038228) mcm6 (ENSCCRG00000038238) cxcr4a (ENSCCRG00000054142) ical1 (ENSCCRG00000037124) ENSCCRG00000037179 bmpr2a (ENSCCRG00000037215) ENSCCRG00000052617 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 1066 desmb (ENSSGRG00000017382) tmem198b (ENSSGRG00000017349) cryba2a (ENSSGRG00000017341) cdk5r2a (ENSSGRG00000017340) ENSSGRG00000017327 ENSSGRG00000017326 asic4b (ENSSGRG00000017325) ENSSGRG00000017324 gmppab (ENSSGRG00000017318) MYLK (ENSSGRG00000017316) ENSSGRG00000016876 arl6ip6 (ENSSGRG00000016851) rprmb (ENSSGRG00000016850) KCNJ3 (ENSSGRG00000016849) ino80db (ENSSGRG00000016847) eef1b2 (ENSSGRG00000016808) ##22 ndufs1 (ENSSGRG00000016800) ENSSGRG00000016798 eef1b2 (ENSSGRG00000016786) ##22 ADAM23 (ENSSGRG00000016780) ENSSGRG00000016779 casp20 (ENSSGRG00000016778) ENSSGRG00000016777 casp8 (ENSSGRG00000016776) Golden-line barbel MODERN SPECIES 1066 cdk5r2a (ENSSGRG00000017340) ENSSGRG00000017327 ENSSGRG00000017326 asic4b (ENSSGRG00000017325) ENSSGRG00000017324 gmppab (ENSSGRG00000017318) MYLK (ENSSGRG00000017316) ENSSGRG00000016876 arl6ip6 (ENSSGRG00000016851) rprmb (ENSSGRG00000016850) KCNJ3 (ENSSGRG00000016849) ino80db (ENSSGRG00000016847) eef1b2 (ENSSGRG00000016808) ##22 ndufs1 (ENSSGRG00000016800) ENSSGRG00000016798 eef1b2 (ENSSGRG00000016786) ##22 ADAM23 (ENSSGRG00000016780) ENSSGRG00000016779 casp20 (ENSSGRG00000016778) ENSSGRG00000016777 casp8 (ENSSGRG00000016776) Cyprininae ANCESTRAL SPECIES 23 ENSGT01050000244857.B.b.g.a ENSGT00940000159052.m.b.b.b ENSGT01030000234748.b.b ENSGT00940000157018.i.b.a ENSGT00940000157879.yb.a.a ENSGT00940000155515.a.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b.a ENSGT01080000257365.b.a.a.b.a.y.a.a ENSGT00940000157974.h.a ENSGT00940000153514.b.m.b.b ENSGT00950000183014.f.a.cb ##22 ENSGT00940000158781.f.a ENSGT00940000162403.a ENSGT00940000164225.ab.b.b ENSGT00940000164225.ab.a.b ENSGT00940000166591.d ENSGT00940000154101.a.a ENSGT00940000158887.d ENSGT01050000244890.a.b.a.i.a.a ENSGT00530000065055.f ENSGT01050000244824.D.b.ib.b ENSGT01050000244848.C.a.h.d ENSGT00390000005530.a.a.m ENSGT00950000183046.a.a.gb.f ENSGT00940000156449.b.a.h ENSGT00940000155972.A.j Cyprininae_a ANCESTRAL SPECIES 30 ENSGT00390000016940.c.b.b.a.b ENSGT00940000160306.o.a.a.b ENSGT00390000008812.a.b.a ENSGT00940000159281.j.b ENSGT01050000244857.B.b.g.a ENSGT00940000159052.m.b.b.b ENSGT01030000234748.b.b ENSGT00940000157018.i.b.a ENSGT00940000157879.yb.a.a ENSGT00940000155515.a.a.a ENSGT00390000009987 ENSGT00390000010523.c.b.g.b.a ENSGT01080000257365.b.a.a.b.a.y.a.a ENSGT00940000157974.h.a ENSGT00940000153514.b.m.b.b ENSGT00950000183014.f.a.cb ##22 ENSGT00940000158781.f.a ENSGT00940000162403.a ENSGT00940000164225.ab.b.b ENSGT00940000164225.ab.a.b ENSGT00940000166591.d ENSGT00940000154101.a.a ENSGT00940000158887.d ENSGT01050000244890.a.b.a.i.a.a ENSGT01050000244824.D.b.ib.b ENSGT01050000244848.C.a.h.d ENSGT00390000005530.a.a.m ENSGT00950000183046.a.a.gb.f ENSGT00940000156449.b.a.h ENSGT00940000155972.A.j ENSGT00940000155995.e.a.a Golden-line barbel MODERN SPECIES 533 CHPF (ENSSGRG00000018066) asic4b (ENSSGRG00000018065) ENSSGRG00000018064 gmppab (ENSSGRG00000017877) MYLK (ENSSGRG00000017808) ENSSGRG00000017788 KCNJ3 (ENSSGRG00000017787) ino80db (ENSSGRG00000017786) eef1b2 (ENSSGRG00000017768) ##22 ndufs1 (ENSSGRG00000017685) ENSSGRG00000017558 ENSSGRG00000017552 ENSSGRG00000017544 casp8 (ENSSGRG00000017542) catip (ENSSGRG00000017540) pnkd (ENSSGRG00000017502) tmbim1a (ENSSGRG00000017497) mcm6 (ENSSGRG00000017490) cxcr4a (ENSSGRG00000017488) ical1 (ENSSGRG00000017451) FAM117B (ENSSGRG00000017446) bmpr2a (ENSSGRG00000017060) ENSSGRG00000008080 slc15a1b (ENSSGRG00000007797) Goldfish MODERN SPECIES 46 desmb (ENSCARG00000025403) tmem198b (ENSCARG00000025392) cryba2a (ENSCARG00000025368) cdk5r2a (ENSCARG00000025366) ENSCARG00000025363 CHPF (ENSCARG00000025358) asic4b (ENSCARG00000025178) gmppab (ENSCARG00000024939) MYLK (ENSCARG00000024481) ENSCARG00000019966 arl6ip6 (ENSCARG00000019784) rprmb (ENSCARG00000019778) KCNJ3 (ENSCARG00000019769) ino80db (ENSCARG00000052358) ndufs1 (ENSCARG00000051504) eef1b2 (ENSCARG00000051338) ##22 ADAM23 (ENSCARG00000050746) dytn (ENSCARG00000050683) casp20 (ENSCARG00000050664) ENSCARG00000050610 catip (ENSCARG00000050563) pnkd (ENSCARG00000049840) tmbim1a (ENSCARG00000049719) si:ch73-71c20.5 (ENSCARG00000049704) mcm6 (ENSCARG00000049591) cxcr4a (ENSCARG00000049560) ical1 (ENSCARG00000049350) FAM117B (ENSCARG00000049305) bmpr2a (ENSCARG00000046009) ENSCARG00000027664 slc15a1b (ENSCARG00000026016) Zebrafish MODERN SPECIES 21 cryba2a (ENSDARG00000030349) tmem198b (ENSDARG00000034685) cdk5r2a (ENSDARG00000071011) ENSDARG00000038283 CHPF (ENSDARG00000078037) asic4b (ENSDARG00000004243) gmppab (ENSDARG00000023498) MYLK (ENSDARG00000004753) ENSDARG00000075041 arl6ip6 (ENSDARG00000071013) rprmb (ENSDARG00000024006) KCNJ3 (ENSDARG00000062217) ino80db (ENSDARG00000062226) ndufs1 (ENSDARG00000028546) ENSDARG00000111107 eef1b2 (ENSDARG00000044521) ##22 ADAM23 (ENSDARG00000062323) dytn (ENSDARG00000071025) casp20 (ENSDARG00000104367) L3HYPDH (ENSDARG00000103763) casp8 (ENSDARG00000058325) catip (ENSDARG00000063009) pnkd (ENSDARG00000071032) tmbim1a (ENSDARG00000058323) si:ch73-71c20.5 (ENSDARG00000097696) mcm6 (ENSDARG00000057683) cxcr4a (ENSDARG00000057633) ical1 (ENSDARG00000057688) FAM117B (ENSDARG00000074921) bmpr2a (ENSDARG00000011941) ENSDARG00000016311 Clupeiformes ANCESTRAL SPECIES 520 ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00940000157974.h ENSGT00940000153514.b.m.b ENSGT00970000193449 ENSGT00950000183014.f.a ##22 ENSGT00940000158781.f Denticle herring MODERN SPECIES 14 nop2 (ENSDCDG00000026597) gtf3c6 (ENSDCDG00000026593) emg1 (ENSDCDG00000026592) zyx (ENSDCDG00000026591) FAM131B (ENSDCDG00000026588) CLCN1 (ENSDCDG00000021927) casp2 (ENSDCDG00000021843) ENSDCDG00000021837 GSTK1 (ENSDCDG00000021800) MYLK (ENSDCDG00000021733) ENSDCDG00000019672 arl6ip6 (ENSDCDG00000019579) KCNJ3 (ENSDCDG00000019577) ino80db (ENSDCDG00000019570) ndufs1 (ENSDCDG00000019539) eef1b2 (ENSDCDG00000019503) ##22 ADAM23 (ENSDCDG00000019044) nbn (ENSDCDG00000018983) OSGIN2 (ENSDCDG00000018976) ENSDCDG00000018970 gtpbp10 (ENSDCDG00000018342) ncapd2 (ENSDCDG00000017694) nppcl (ENSDCDG00000017623) gapdh (ENSDCDG00000017435) ENSDCDG00000017394 styk1b (ENSDCDG00000017385) phc1 (ENSDCDG00000017378) m6pr (ENSDCDG00000017372) psmd4b (ENSDCDG00000017334) pip5k1ab (ENSDCDG00000017214) ENSDCDG00000017203 Atlantic herring MODERN SPECIES 7 ENSCHAG00000011528 ENSCHAG00000011475 ENSCHAG00000011454 ENSCHAG00000011315 ENSCHAG00000011284 ENSCHAG00000011200 MYLK (ENSCHAG00000010889) ENSCHAG00000003427 arl6ip6 (ENSCHAG00000003105) rprmb (ENSCHAG00000003076) rprmb (ENSCHAG00000003062) KCNJ3 (ENSCHAG00000003013) ino80db (ENSCHAG00000002966) ndufs1 (ENSCHAG00000002609) ENSCHAG00000002561 eef1b2 (ENSCHAG00000002376) ##22 ADAM23 (ENSCHAG00000021280) ENSCHAG00000021268 ENSCHAG00000021255 ENSCHAG00000021216 ENSCHAG00000021206 ENSCHAG00000021090 ENSCHAG00000021038 mcm6 (ENSCHAG00000020929) si:ch73-71c20.5 (ENSCHAG00000020920) tmbim1a (ENSCHAG00000020913) ENSCHAG00000020694 ENSCHAG00000020677 ENSCHAG00000020670 si:ch211-214j24.10 (ENSCHAG00000020664) ENSCHAG00000020644 Vertebrata ANCESTRAL SPECIES ENSGT00950000183014.e ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183014.e ##22 Hagfish MODERN SPECIES 876 ENSEBUG00000004978 ENSEBUG00000013484 ENSEBUG00000007600 ENSEBUG00000015179 ENSEBUG00000012631 MAP3K13 (ENSEBUG00000006010) ENSEBUG00000006050 ##22 ENSEBUG00000010824 ENSEBUG00000000819 ENSEBUG00000009490 ENSEBUG00000005284