Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00500000046149	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00390000006516	ENSGT00940000162096 #27	ENSGT00390000016597 #28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Glires	ANCESTRAL SPECIES	5	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00500000046149	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00390000006516	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00390000006516	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00390000006516	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.i.b #28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Eurasian red squirrel	MODERN SPECIES	16	AGER (ENSSVLG00005009044) #7	RNF5 (ENSSVLG00005009405) #8	AGPAT1 (ENSSVLG00005009434) #9	ENSSVLG00005009478 #10	PRRT1 (ENSSVLG00005009624) #11	FKBPL (ENSSVLG00005009660) #12	ATF6B (ENSSVLG00005009694) #13	ENSSVLG00005009930 #14	ENSSVLG00005010039 #15	CYP21A2 (ENSSVLG00005010144) #16	ENSSVLG00005010830 #17	STK19 (ENSSVLG00005013398) #18	DXO (ENSSVLG00005013565) #19	SKIC2 (ENSSVLG00005013769) #20	NELFE (ENSSVLG00005013975) #21	ZBTB12 (ENSSVLG00005015684) #22	EHMT2 (ENSSVLG00005015794) #23	SLC44A4 (ENSSVLG00005016167) #24	NEU1 (ENSSVLG00005016819) #25	ENSSVLG00005016858 #26	HSPA1L (ENSSVLG00005016879) #27	ENSSVLG00005016911 #28	VARS1 (ENSSVLG00005016986) #29	VWA7 (ENSSVLG00005017120) #30	SAPCD1 (ENSSVLG00005017335) #31	MSH5 (ENSSVLG00005017475) #32	CLIC1 (ENSSVLG00005018219) #33	DDAH2 (ENSSVLG00005018334) #34	MPIG6B (ENSSVLG00005018418) #35	LY6G6C (ENSSVLG00005018810) #36	LY6G6D (ENSSVLG00005018868) #37
Marmotini	ANCESTRAL SPECIES	18	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.i.b #28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Marmotini_b	ANCESTRAL SPECIES	82	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.i.b #28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Arctic ground squirrel	MODERN SPECIES	662	EGFL8 (ENSUPAG00010019691) #10	PPT2 (ENSUPAG00010019699)	PRRT1 (ENSUPAG00010019711) #11	FKBPL (ENSUPAG00010019716) #12	ATF6B (ENSUPAG00010019718) #13	ENSUPAG00010019727 #15	ENSUPAG00010019731 #15	CYP21A2 (ENSUPAG00010019746) #16	ENSUPAG00010019979 #17	STK19 (ENSUPAG00010019994) #18	DXO (ENSUPAG00010019997) #19	SKIC2 (ENSUPAG00010020008) #20	NELFE (ENSUPAG00010020030) #21	CFB (ENSUPAG00010020047)	C2 (ENSUPAG00010020070)	ZBTB12 (ENSUPAG00010020115) #22	EHMT2 (ENSUPAG00010020118) #23	NEU1 (ENSUPAG00010020203) #25	ENSUPAG00010020208 #26	ENSUPAG00010020209	HSPA1L (ENSUPAG00010020211) #27	ENSUPAG00010020214 #28	VARS1 (ENSUPAG00010020220) #29	VWA7 (ENSUPAG00010020234) #30	SAPCD1 (ENSUPAG00010020268) #31	MSH5 (ENSUPAG00010020275) #32	CLIC1 (ENSUPAG00010020314) #33	DDAH2 (ENSUPAG00010020318) #34	MPIG6B (ENSUPAG00010020337) #35	LY6G6C (ENSUPAG00010020345) #36	LY6G6D (ENSUPAG00010020352) #37
Squirrel	MODERN SPECIES	327	AGPAT1 (ENSSTOG00000008401) #9	EGFL8 (ENSSTOG00000029022) #10	PPT2 (ENSSTOG00000014721)	PRRT1 (ENSSTOG00000026158) #11	FKBPL (ENSSTOG00000014716) #12	ATF6B (ENSSTOG00000027684) #13	TNXB (ENSSTOG00000024569) #15	CYP21A2 (ENSSTOG00000014662) #16	ENSSTOG00000014639 #17	STK19 (ENSSTOG00000014629) #18	DXO (ENSSTOG00000027075) #19	SKIC2 (ENSSTOG00000014596) #20	NELFE (ENSSTOG00000027409) #21	CFB (ENSSTOG00000014577)	C2 (ENSSTOG00000029554)	ZBTB12 (ENSSTOG00000027411) #22	EHMT2 (ENSSTOG00000020917) #23	SLC44A4 (ENSSTOG00000020040) #24	NEU1 (ENSSTOG00000013187) #25	ENSSTOG00000029617 #26	ENSSTOG00000033750 #26	HSPA1L (ENSSTOG00000029893) #27	LSM2 (ENSSTOG00000013144) ##28	VARS1 (ENSSTOG00000013112) #29	VWA7 (ENSSTOG00000013089) #30	SAPCD1 (ENSSTOG00000020002) #31	MSH5 (ENSSTOG00000013079) #32	CLIC1 (ENSSTOG00000027220) #33	DDAH2 (ENSSTOG00000020601) #34	MPIG6B (ENSSTOG00000013076) #35	LY6G6C (ENSSTOG00000013066) #36
Alpin marmot	MODERN SPECIES	20	AGPAT1 (ENSMMMG00000017992) #9	EGFL8 (ENSMMMG00000017988) #10	PPT2 (ENSMMMG00000017980)	PRRT1 (ENSMMMG00000017975) #11	FKBPL (ENSMMMG00000017964) #12	ATF6B (ENSMMMG00000017915) #13	TNXB (ENSMMMG00000017623) #15	CYP21A2 (ENSMMMG00000017250) #16	ENSMMMG00000017231 #17	STK19 (ENSMMMG00000017217) #18	DXO (ENSMMMG00000017202) #19	SKIC2 (ENSMMMG00000017173) #20	NELFE (ENSMMMG00000017122) #21	CFB (ENSMMMG00000017099)	C2 (ENSMMMG00000017046)	ZBTB12 (ENSMMMG00000017035) #22	EHMT2 (ENSMMMG00000010523) #23	SLC44A4 (ENSMMMG00000010455) #24	NEU1 (ENSMMMG00000010432) #25	ENSMMMG00000010423 #26	HSPA1L (ENSMMMG00000010419) #27	LSM2 (ENSMMMG00000010414) #28	VARS1 (ENSMMMG00000010374) #29	VWA7 (ENSMMMG00000010320) #30	SAPCD1 (ENSMMMG00000010310) #31	MSH5 (ENSMMMG00000010239) #32	CLIC1 (ENSMMMG00000010225) #33	DDAH2 (ENSMMMG00000010203) #34	MPIG6B (ENSMMMG00000010181) #35	LY6G6C (ENSMMMG00000010168) #36	LY6G6D (ENSMMMG00000010160) #37
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215.s #26	ENSGT00390000006516	ENSGT00940000161215.t #26	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215.s #26	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36	ENSGT00390000015960.a.b.b #37
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000158338 #16	ENSGT00940000155565 #15	ENSGT01030000235045	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215.s #26	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36	ENSGT00390000015960.a.b.b #37
Long-tailed chinchilla	MODERN SPECIES	144	EGFL8 (ENSCLAG00000007204) #10	PPT2 (ENSCLAG00000009963)	ENSCLAG00000007564 #11	FKBPL (ENSCLAG00000008369) #12	ATF6B (ENSCLAG00000007441) #13	CYP21A2 (ENSCLAG00000007939) #16	ENSCLAG00000008330 #15	ENSCLAG00000007618	ENSCLAG00000008416 #17	STK19 (ENSCLAG00000007097) #18	DXO (ENSCLAG00000006682) #19	SKIC2 (ENSCLAG00000007678) #20	NELFE (ENSCLAG00000009684) #21	CFB (ENSCLAG00000010397)	C2 (ENSCLAG00000007167)	ZBTB12 (ENSCLAG00000007108) #22	EHMT2 (ENSCLAG00000009673) #23	SLC44A4 (ENSCLAG00000006728) #24	NEU1 (ENSCLAG00000008497) #25	ENSCLAG00000018000 #26	HSPA1L (ENSCLAG00000007254) #27	LSM2 (ENSCLAG00000008081) ##28	VARS1 (ENSCLAG00000009470) #29	VWA7 (ENSCLAG00000007284) #30	SAPCD1 (ENSCLAG00000006758) #31	MSH5 (ENSCLAG00000011345) #32	CLIC1 (ENSCLAG00000008227) #33	MPIG6B (ENSCLAG00000007245) #35	DDAH2 (ENSCLAG00000006559) #34	LY6G6C (ENSCLAG00000009864) #36	ENSCLAG00000009432 #37
Degu	MODERN SPECIES	46	ENSODEG00000017614 #8	AGPAT1 (ENSODEG00000017444) #9	EGFL8 (ENSODEG00000017557) #10	PPT2 (ENSODEG00000017440)	ENSODEG00000017443 #11	ATF6B (ENSODEG00000017478) #13	ENSODEG00000020459	ENSODEG00000017498 #15	ENSODEG00000017692	STK19 (ENSODEG00000017509) #18	DXO (ENSODEG00000017552) #19	SKIC2 (ENSODEG00000017516) #20	NELFE (ENSODEG00000017670) #21	CFB (ENSODEG00000017537)	C2 (ENSODEG00000017792)	ZBTB12 (ENSODEG00000017709) #22	EHMT2 (ENSODEG00000017547) #23	SLC44A4 (ENSODEG00000017567) #24	NEU1 (ENSODEG00000017719) #25	ENSODEG00000020560 #26	ENSODEG00000020564 #26	HSPA1L (ENSODEG00000020501) #27	LSM2 (ENSODEG00000017583) ##28	VARS1 (ENSODEG00000017681) #29	ENSODEG00000017700 #30	SAPCD1 (ENSODEG00000017689) #31	MSH5 (ENSODEG00000017644) #32	ENSODEG00000017682 #33	DDAH2 (ENSODEG00000017617) #34	MPIG6B (ENSODEG00000017842) #35	LY6G6C (ENSODEG00000017694) #36
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Muroidea	ANCESTRAL SPECIES	15	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36	ENSGT00390000015960.a.b.b #37
Cricetinae	ANCESTRAL SPECIES	43	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00940000155739 #17	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36	ENSGT00390000015960.a.b.b #37	ENSGT00390000007175
Golden Hamster	MODERN SPECIES	856	Pbx2 (ENSMAUG00000003275)	Ager (ENSMAUG00000001006) #7	Rnf5 (ENSMAUG00000000684) #8	Agpat1 (ENSMAUG00000011278) #9	Egfl8 (ENSMAUG00000013647) #10	Ppt2 (ENSMAUG00000010078)	ENSMAUG00000019956 #11	ENSMAUG00000014704	Tnxb (ENSMAUG00000019386) #15	Cyp21a1 (ENSMAUG00000022007) #16	C4b (ENSMAUG00000015130) #17	Dxo (ENSMAUG00000022102) #19	Skic2 (ENSMAUG00000018613) #20	Nelfe (ENSMAUG00000016812) #21	Cfb (ENSMAUG00000005083)	Zbtb12 (ENSMAUG00000008051) #22	Ehmt2 (ENSMAUG00000021721) #23	Slc44a4 (ENSMAUG00000016147) #24	Neu1 (ENSMAUG00000006425) #25	ENSMAUG00000007504	Hspa1l (ENSMAUG00000015361) #27	Lsm2 (ENSMAUG00000021966) ##28	Vars (ENSMAUG00000006715) #29	Vwa7 (ENSMAUG00000012692) #30	Sapcd1 (ENSMAUG00000012648) #31	Msh5 (ENSMAUG00000016112) #32	Clic1 (ENSMAUG00000021659) #33	Ddah2 (ENSMAUG00000000563) #34	Mpig6b (ENSMAUG00000000529) #35	Ly6g6c (ENSMAUG00000014579) #36	Ly6g6d (ENSMAUG00000009349) #37
Chinese hamster chok1gshd	MODERN SPECIES	303	Egfl8 (ENSCGRG00001000126) #10	Ppt2 (ENSCGRG00001003777)	Prrt1 (ENSCGRG00001009317) #11	Fkbpl (ENSCGRG00001003151) #12	Atf6b (ENSCGRG00001012473) #13	Tnxb (ENSCGRG00001021481) #15	Cyp21a1 (ENSCGRG00001019003) #16	C4b (ENSCGRG00001019658) #17	Stk19 (ENSCGRG00001000387) #18	Dxo (ENSCGRG00001001718) #19	Skic2 (ENSCGRG00001008385) #20	Nelfe (ENSCGRG00001016608) #21	Cfb (ENSCGRG00001020632)	C2 (ENSCGRG00001005331)	ENSCGRG00001001109 #26	Zbtb12 (ENSCGRG00001002052) #22	Ehmt2 (ENSCGRG00001022736) #23	Slc44a4 (ENSCGRG00001020159) #24	Neu1 (ENSCGRG00001010017) #25	Hspa1l (ENSCGRG00001000703) #27	Lsm2 (ENSCGRG00001013932) ##28	Vars (ENSCGRG00001005686) #29	Vwa7 (ENSCGRG00001024017) #30	Sapcd1 (ENSCGRG00001001962) #31	Msh5 (ENSCGRG00001022358) #32	ENSCGRG00001005949 #33	Ddah2 (ENSCGRG00001013784) #34	Mpig6b (ENSCGRG00001000218) #35	Ly6g6c (ENSCGRG00001019394) #36	Ly6g6d (ENSCGRG00001009978) #37	Ly6g6e (ENSCGRG00001017928)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36	ENSGT00390000015960.a.b.b #37
Northern American deer mouse	MODERN SPECIES	13	Rnf5 (ENSPEMG00000028952) #8	Agpat1 (ENSPEMG00000016710) #9	Egfl8 (ENSPEMG00000001405) #10	Ppt2 (ENSPEMG00000008644)	Prrt1 (ENSPEMG00000016595) #11	Fkbpl (ENSPEMG00000017009) #12	Atf6b (ENSPEMG00000019061) #13	Tnxb (ENSPEMG00000004596) #15	Cyp21a1 (ENSPEMG00000014963) #16	Dxo (ENSPEMG00000009229) #19	Stk19 (ENSPEMG00000015476) #18	Skic2 (ENSPEMG00000019001) #20	Nelfe (ENSPEMG00000015423) #21	Cfb (ENSPEMG00000017834)	C2 (ENSPEMG00000031051)	Zbtb12 (ENSPEMG00000028249) #22	Ehmt2 (ENSPEMG00000011404) #23	Slc44a4 (ENSPEMG00000011491) #24	Neu1 (ENSPEMG00000009374) #25	ENSPEMG00000027556 #26	ENSPEMG00000028093 #26	Hspa1l (ENSPEMG00000010938) #27	Lsm2 (ENSPEMG00000026796) ##28	Vars (ENSPEMG00000006639) #29	Vwa7 (ENSPEMG00000004592) #30	Sapcd1 (ENSPEMG00000030346) #31	Msh5 (ENSPEMG00000015565) #32	Clic1 (ENSPEMG00000016556) #33	Ddah2 (ENSPEMG00000009545) #34	Mpig6b (ENSPEMG00000009149) #35	Ly6g6c (ENSPEMG00000012722) #36
Prairie vole	MODERN SPECIES	170	Ager (ENSMOCG00000022815) #7	Rnf5 (ENSMOCG00000022045) #8	Agpat1 (ENSMOCG00000019018) #9	Egfl8 (ENSMOCG00000008165) #10	Ppt2 (ENSMOCG00000012081)	Prrt1 (ENSMOCG00000019137) #11	Fkbpl (ENSMOCG00000005479) #12	ENSMOCG00000000322	Tnxb (ENSMOCG00000010394) #15	Cyp21a1 (ENSMOCG00000016151) #16	Stk19 (ENSMOCG00000021590) #18	Dxo (ENSMOCG00000005928) #19	Skic2 (ENSMOCG00000014240) #20	Nelfe (ENSMOCG00000003723) #21	Cfb (ENSMOCG00000001320)	Zbtb12 (ENSMOCG00000002711) #22	Ehmt2 (ENSMOCG00000015390) #23	Slc44a4 (ENSMOCG00000016917) #24	Neu1 (ENSMOCG00000012259) #25	ENSMOCG00000005617 #26	Hspa1l (ENSMOCG00000003223) #27	Lsm2 (ENSMOCG00000015306) ##28	Vars (ENSMOCG00000015404) #29	Vwa7 (ENSMOCG00000010617) #30	Sapcd1 (ENSMOCG00000000928) #31	Msh5 (ENSMOCG00000022918) #32	Clic1 (ENSMOCG00000017714) #33	Ddah2 (ENSMOCG00000011844) #34	Mpig6b (ENSMOCG00000022391) #35	Ly6g6c (ENSMOCG00000016036) #36	Ly6g6d (ENSMOCG00000006983) #37
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Mus	ANCESTRAL SPECIES	16	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b.c.a #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000160293	ENSGT00890000139566 #7	ENSGT00390000014107.a.b.c.a #8	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
Mouse	MODERN SPECIES	8	Egfl8 (ENSMUSG00000015467) #10	Ppt2 (ENSMUSG00000015474)	Prrt1 (ENSMUSG00000015476) #11	Fkbpl (ENSMUSG00000033739) #12	Atf6b (ENSMUSG00000015461) #13	Tnxb (ENSMUSG00000033327) #15	C4b (ENSMUSG00000073418) #17	Cyp21a1 (ENSMUSG00000024365) #16	Stk19 (ENSMUSG00000061207) #18	Dxo (ENSMUSG00000040482) #19	Skic2 (ENSMUSG00000040356) #20	Nelfe (ENSMUSG00000024369) #21	Cfb (ENSMUSG00000090231)	Gm20547 (ENSMUSG00000092511)	C2 (ENSMUSG00000024371)	Zbtb12 (ENSMUSG00000049823) #22	Ehmt2 (ENSMUSG00000013787) #23	Slc44a4 (ENSMUSG00000007034) #24	Neu1 (ENSMUSG00000007038) #25	Hspa1b (ENSMUSG00000090877) #26	Hspa1a (ENSMUSG00000091971) #26	Hspa1l (ENSMUSG00000007033) #27	Lsm2 (ENSMUSG00000007050) ##28	Vars (ENSMUSG00000007029) #29	Vwa7 (ENSMUSG00000007030) #30	Sapcd1 (ENSMUSG00000036185) #31	Msh5 (ENSMUSG00000007035) #32	Clic1 (ENSMUSG00000007041) #33	Ddah2 (ENSMUSG00000007039) #34	Mpig6b (ENSMUSG00000073414) #35	Ly6g6c (ENSMUSG00000092586) #36
Mus_C	ANCESTRAL SPECIES	9	ENSGT00390000008726.h.b #9	ENSGT00940000162975 #10	ENSGT00940000155779.a.b	ENSGT00940000162382 #11	ENSGT00920000149187 #12	ENSGT00940000160798 #13	ENSGT00390000018295 #18	ENSGT00940000155565 #15	ENSGT00940000158338 #16	ENSGT00940000155739 #17	ENSGT00390000006425 #19	ENSGT00940000158255 #20	ENSGT00630000089917 #21	ENSGT00940000158605.fb	ENSGT00940000162934	ENSGT00940000162418 #22	ENSGT00940000159459 #23	ENSGT00940000160576 #24	ENSGT00950000182944.D #25	ENSGT00940000161215 #26	ENSGT00860000136229	ENSGT00940000162096 #27	ENSGT00390000016597.j ##28	ENSGT00940000157775 #29	ENSGT00390000011517.a.b #30	ENSGT00500000045192 #31	ENSGT00550000074977 #32	ENSGT00940000154708 #33	ENSGT00940000160769 #34	ENSGT00390000017793 #35	ENSGT00390000000752 #36
spretus	MODERN SPECIES	8	Agpat1 (MGP_SPRETEiJ_G0022372) #9	Egfl8 (MGP_SPRETEiJ_G0022373) #10	Ppt2 (MGP_SPRETEiJ_G0022374)	Prrt1 (MGP_SPRETEiJ_G0022375) #11	Fkbpl (MGP_SPRETEiJ_G0022376) #12	Atf6b (MGP_SPRETEiJ_G0022377) #13	MGP_SPRETEiJ_G0022378 #17	MGP_SPRETEiJ_G0022379 #18	MGP_SPRETEiJ_G0022380 #16	Dxo (MGP_SPRETEiJ_G0022381) #19	Skic2 (MGP_SPRETEiJ_G0022382) #20	Nelfe (MGP_SPRETEiJ_G0022383) #21	MGP_SPRETEiJ_G0022384	MGP_SPRETEiJ_G0022385	C2 (MGP_SPRETEiJ_G0022386)	Zbtb12 (MGP_SPRETEiJ_G0022387) #22	Ehmt2 (MGP_SPRETEiJ_G0022388) #23	Slc44a4 (MGP_SPRETEiJ_G0022389) #24	Neu1 (MGP_SPRETEiJ_G0022390) #25	MGP_SPRETEiJ_G0022391 #26	MGP_SPRETEiJ_G0022392 #26	MGP_SPRETEiJ_G0022393	Hspa1l (MGP_SPRETEiJ_G0022394) #27	Lsm2 (MGP_SPRETEiJ_G0022395) ##28	Vars (MGP_SPRETEiJ_G0022396) #29	Vwa7 (MGP_SPRETEiJ_G0022397) #30	Sapcd1 (MGP_SPRETEiJ_G0022398) #31	Msh5 (MGP_SPRETEiJ_G0022399) #32	Clic1 (MGP_SPRETEiJ_G0022400) #33	Ddah2 (MGP_SPRETEiJ_G0022401) #34	Mpig6b (MGP_SPRETEiJ_G0022402) #35
Ryukyu mouse	MODERN SPECIES	8	Egfl8 (MGP_CAROLIEiJ_G0021467) #10	Ppt2 (MGP_CAROLIEiJ_G0021468)	Prrt1 (MGP_CAROLIEiJ_G0021469) #11	Fkbpl (MGP_CAROLIEiJ_G0021470) #12	Atf6b (MGP_CAROLIEiJ_G0021471) #13	Tnxb (MGP_CAROLIEiJ_G0021472) #15	Cyp21a1 (MGP_CAROLIEiJ_G0021473) #16	C4b (MGP_CAROLIEiJ_G0021474) #17	Stk19 (MGP_CAROLIEiJ_G0021475) #18	Dxo (MGP_CAROLIEiJ_G0021476) #19	Skic2 (MGP_CAROLIEiJ_G0021477) #20	Nelfe (MGP_CAROLIEiJ_G0021478) #21	MGP_CAROLIEiJ_G0021479	MGP_CAROLIEiJ_G0021480	C2 (MGP_CAROLIEiJ_G0021481)	Zbtb12 (MGP_CAROLIEiJ_G0021482) #22	Ehmt2 (MGP_CAROLIEiJ_G0021483) #23	Slc44a4 (MGP_CAROLIEiJ_G0021484) #24	Neu1 (MGP_CAROLIEiJ_G0021485) #25	MGP_CAROLIEiJ_G0021486 #26	MGP_CAROLIEiJ_G0021487	MGP_CAROLIEiJ_G0021488 #26	Hspa1l (MGP_CAROLIEiJ_G0021489) #27	Lsm2 (MGP_CAROLIEiJ_G0021490) ##28	Vars (MGP_CAROLIEiJ_G0021491) #29	Vwa7 (MGP_CAROLIEiJ_G0021492) #30	Sapcd1 (MGP_CAROLIEiJ_G0021493) #31	Msh5 (MGP_CAROLIEiJ_G0021494) #32	Clic1 (MGP_CAROLIEiJ_G0021495) #33	Ddah2 (MGP_CAROLIEiJ_G0021496) #34	Mpig6b (MGP_CAROLIEiJ_G0021497) #35
Shrew mouse	MODERN SPECIES	9	Egfl8 (MGP_PahariEiJ_G0020462) #10	Ppt2 (MGP_PahariEiJ_G0020463)	Prrt1 (MGP_PahariEiJ_G0020464) #11	Fkbpl (MGP_PahariEiJ_G0020465) #12	Atf6b (MGP_PahariEiJ_G0020466) #13	Tnxb (MGP_PahariEiJ_G0020467) #15	Cyp21a1 (MGP_PahariEiJ_G0020468) #16	C4b (MGP_PahariEiJ_G0020469) #17	Stk19 (MGP_PahariEiJ_G0020470) #18	Dxo (MGP_PahariEiJ_G0020471) #19	Skic2 (MGP_PahariEiJ_G0020472) #20	Nelfe (MGP_PahariEiJ_G0020473) #21	MGP_PahariEiJ_G0020474	MGP_PahariEiJ_G0020475	C2 (MGP_PahariEiJ_G0020476)	Zbtb12 (MGP_PahariEiJ_G0020477) #22	Ehmt2 (MGP_PahariEiJ_G0020478) #23	Slc44a4 (MGP_PahariEiJ_G0020479) #24	Neu1 (MGP_PahariEiJ_G0020480) #25	MGP_PahariEiJ_G0020481 #26	MGP_PahariEiJ_G0020482 #26	MGP_PahariEiJ_G0020483	Hspa1l (MGP_PahariEiJ_G0020484) #27	Lsm2 (MGP_PahariEiJ_G0020485) ##28	Vars (MGP_PahariEiJ_G0020486) #29	Vwa7 (MGP_PahariEiJ_G0020487) #30	Sapcd1 (MGP_PahariEiJ_G0020488) #31	Msh5 (MGP_PahariEiJ_G0020489) #32	Clic1 (MGP_PahariEiJ_G0020490) #33	Ddah2 (MGP_PahariEiJ_G0020491) #34	Mpig6b (MGP_PahariEiJ_G0020492) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1767	Agpat1 (ENSNGAG00000013919) #9	Egfl8 (ENSNGAG00000022739) #10	Ppt2 (ENSNGAG00000011016)	Prrt1 (ENSNGAG00000006079) #11	Fkbpl (ENSNGAG00000010616) #12	ENSNGAG00000023473 #13	ENSNGAG00000020837	Tnxb (ENSNGAG00000000974) #15	Cyp21a1 (ENSNGAG00000013887) #16	C4b (ENSNGAG00000012712) #17	Stk19 (ENSNGAG00000024026) #18	Dxo (ENSNGAG00000021244) #19	ENSNGAG00000024121 #20	Nelfe (ENSNGAG00000016248) #21	Cfb (ENSNGAG00000009653)	Zbtb12 (ENSNGAG00000011842) #22	Ehmt2 (ENSNGAG00000023439) #23	Slc44a4 (ENSNGAG00000021975) #24	Neu1 (ENSNGAG00000016139) #25	Hspa1l (ENSNGAG00000000836) #27	Lsm2 (ENSNGAG00000003997) ##28	Vars (ENSNGAG00000012151) #29	Vwa7 (ENSNGAG00000005246) #30	Sapcd1 (ENSNGAG00000022475) #31	Msh5 (ENSNGAG00000018979) #32	Clic1 (ENSNGAG00000023302) #33	Ddah2 (ENSNGAG00000002913) #34	Mpig6b (ENSNGAG00000021859) #35	Ly6g6c (ENSNGAG00000023350) #36	Ly6g6d (ENSNGAG00000022523) #37	Ly6g6e (ENSNGAG00000001035)