Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Theria	ANCESTRAL SPECIES	58	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163258 #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Eutheria	ANCESTRAL SPECIES	5	ENSGT00510000047718 #9	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163845	ENSGT00940000158579	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00940000163845	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00940000163845	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00940000163845	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00940000163845	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Equus	ANCESTRAL SPECIES	13	ENSGT00940000157621	ENSGT00530000063721.A	ENSGT00940000161427	ENSGT00930000151026	ENSGT00730000110871.a.b ##31	ENSGT00530000063817.a	ENSGT00940000162584	ENSGT00940000157640	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Donkey	MODERN SPECIES	9	ENSEASG00005026444 #7	ENSEASG00005026028 #8	ENSEASG00005000235 #9	UBE2G2 (ENSEASG00005037598) #10	ENSEASG00005025870 #11	PTTG1IP (ENSEASG00005034537) #12	ENSEASG00005036911 #13	ENSEASG00005018136 #14	ENSEASG00005020183 #15	ENSEASG00005032799 #16	SLX9 (ENSEASG00005023956) #17	ADARB1 (ENSEASG00005007085) #18	POFUT2 (ENSEASG00005007081) #19	COL18A1 (ENSEASG00005038430) #20	SLC19A1 (ENSEASG00005007070) #21	PCBP3 (ENSEASG00005007068) #22	COL6A1 (ENSEASG00005035660) #23	COL6A2 (ENSEASG00005007037) #24	FTCD (ENSEASG00005007018) #25	SPATC1L (ENSEASG00005007013) #26	LSS (ENSEASG00005006856) #27	ENSEASG00005006445 #28	MCM3AP (ENSEASG00005006458) #29	ENSEASG00005025745 #30	PCNT (ENSEASG00005006433) #31	DIP2A (ENSEASG00005002841) #32	S100B (ENSEASG00005028449) #33	ENSEASG00005002664 #34	ENSEASG00005012665 #35	ENSEASG00005012661 #36	SH2D4A (ENSEASG00005012656) #37
Horse	MODERN SPECIES	18	ENSECAG00000051909 ##8	ENSECAG00000051879	ENSECAG00000015117 ##7	ENSECAG00000047135 ##7	ENSECAG00000015092 ##7	ENSECAG00000049876 ##7	UBE2G2 (ENSECAG00000015327) #10	ENSECAG00000021271 #11	PTTG1IP (ENSECAG00000022770) #12	ITGB2 (ENSECAG00000023061) #13	SLX9 (ENSECAG00000016590) #17	ADARB1 (ENSECAG00000019917) #18	POFUT2 (ENSECAG00000004992) #19	COL18A1 (ENSECAG00000016361) #20	SLC19A1 (ENSECAG00000002116) #21	PCBP3 (ENSECAG00000012413) #22	ENSECAG00000047101	COL6A1 (ENSECAG00000022731) #23	COL6A2 (ENSECAG00000019436) #24	FTCD (ENSECAG00000011979) #25	SPATC1L (ENSECAG00000006870) #26	LSS (ENSECAG00000008899) #27	ENSECAG00000047281	MCM3AP (ENSECAG00000018980) #29	YBEY (ENSECAG00000019348) #28	ENSECAG00000049237 #30	PCNT (ENSECAG00000022455) #31	ENSECAG00000048453	DIP2A (ENSECAG00000052329) #32	S100B (ENSECAG00000012395) #33	PRMT2 (ENSECAG00000012406) #34
Chiroptera	ANCESTRAL SPECIES	140																ENSGT00940000162185 #22	ENSGT00940000163601
Megabat	MODERN SPECIES	2711																PCBP3 (ENSPVAG00000000832) #22
Microchiroptera	ANCESTRAL SPECIES	111																ENSGT00940000162185 #22	ENSGT00940000163601
Microbat	MODERN SPECIES	1228	LRRC3 (ENSMLUG00000011171)	TSPEAR (ENSMLUG00000011225) #9	ENSMLUG00000017019	ENSMLUG00000010897	ENSMLUG00000011524	UBE2G2 (ENSMLUG00000011264) #10	ENSMLUG00000028601 #11	PTTG1IP (ENSMLUG00000003464) #12	ITGB2 (ENSMLUG00000003153) #13	SLX9 (ENSMLUG00000017651) #17	ADARB1 (ENSMLUG00000011328) #18	POFUT2 (ENSMLUG00000013242) #19	ENSMLUG00000025632	COL18A1 (ENSMLUG00000015768) #20	SLC19A1 (ENSMLUG00000015818) #21	PCBP3 (ENSMLUG00000003074) #22	ENSMLUG00000013364
Greater horseshoe bat	MODERN SPECIES	24												ENSRFEG00010000662	PSTPIP1 (ENSRFEG00010000638)	TSPAN3 (ENSRFEG00010000537)	PEAK1 (ENSRFEG00010000471)	ENSRFEG00010000440 #22	HMG20A (ENSRFEG00010000405)	LINGO1 (ENSRFEG00010000388)	ODF3L1 (ENSRFEG00010000315)	CSPG4 (ENSRFEG00010000291)	SNX33 (ENSRFEG00010000269)	IMP3 (ENSRFEG00010000251)	SNUPN (ENSRFEG00010000227)	PTPN9 (ENSRFEG00010018001)	SIN3A (ENSRFEG00010017915)	MAN2C1 (ENSRFEG00010017736)	NEIL1 (ENSRFEG00010017643)	COMMD4 (ENSRFEG00010017552)	C15orf39 (ENSRFEG00010017498)	SCAMP5 (ENSRFEG00010017341)	RPP25 (ENSRFEG00010017319)
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.a.a.b	ENSGT00940000163441.f.b.a.a	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.b.a.a.c	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Panthera	ANCESTRAL SPECIES	17	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.b.a.a.c	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Panthera_a	ANCESTRAL SPECIES	71						ENSGT00940000163441.f.b.a.a.c	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
lion	MODERN SPECIES	52										ENSPLOG00000017978 #13	SLX9 (ENSPLOG00000018073) #17	ADARB1 (ENSPLOG00000018125) #18	POFUT2 (ENSPLOG00000018358) #19	ENSPLOG00000018412 #20	SLC19A1 (ENSPLOG00000018478) #21	PCBP3 (ENSPLOG00000018577) #22
leopard	MODERN SPECIES	167							ENSPPRG00000003469	UBE2G2 (ENSPPRG00000003006) #10	SUMO3 (ENSPPRG00000002862) #11	PTTG1IP (ENSPPRG00000001982) #12	ITGB2 (ENSPPRG00000001670) #13	SLX9 (ENSPPRG00000012813) #17	ADARB1 (ENSPPRG00000012281) #18	POFUT2 (ENSPPRG00000010612) #19	SLC19A1 (ENSPPRG00000004605) #21	PCBP3 (ENSPPRG00000003933) #22	COL6A1 (ENSPPRG00000000566) #23	COL6A2 (ENSPPRG00000024558) #24	FTCD (ENSPPRG00000011402) #25	SPATC1L (ENSPPRG00000008783) #26	LSS (ENSPPRG00000008675) #27	MCM3AP (ENSPPRG00000006018) #29	YBEY (ENSPPRG00000003325) #28	DIP2A (ENSPPRG00000023404) #32	S100B (ENSPPRG00000012850) #33	PRMT2 (ENSPPRG00000011758) #34
Tiger	MODERN SPECIES	307	GATD3 (ENSPTIG00000008371)	ICOSLG (ENSPTIG00000008688)	DNMT3L (ENSPTIG00000009725)	PFKL (ENSPTIG00000011121)	TRPM2 (ENSPTIG00000012361)	TSPEAR (ENSPTIG00000018683) #9	ENSPTIG00000020241	ENSPTIG00000020358	UBE2G2 (ENSPTIG00000020440) #10	ENSPTIG00000020555 ##11	ENSPTIG00000021258 #12	ITGB2 (ENSPTIG00000021415) #13	ENSPTIG00000007408 #17	ADARB1 (ENSPTIG00000007673) #18	POFUT2 (ENSPTIG00000011476) #19	PCBP3 (ENSPTIG00000012038) #22
Cat	MODERN SPECIES	240	CFAP410 (ENSFCAG00000040115)	TRPM2 (ENSFCAG00000009173)	LRRC3 (ENSFCAG00000009174)	ENSFCAG00000037433	ENSFCAG00000034182	ENSFCAG00000046465	ENSFCAG00000037983	TSPEAR (ENSFCAG00000001772) #9	UBE2G2 (ENSFCAG00000042355) #10	ITGB2 (ENSFCAG00000002284) #13	SLX9 (ENSFCAG00000038348) #17	ADARB1 (ENSFCAG00000009665) #18	POFUT2 (ENSFCAG00000043455) #19	COL18A1 (ENSFCAG00000043124) #20	SLC19A1 (ENSFCAG00000026096) #21	PCBP3 (ENSFCAG00000014812) #22	COL6A1 (ENSFCAG00000014813) #23	COL6A2 (ENSFCAG00000014814) #24	FTCD (ENSFCAG00000014815) #25	SPATC1L (ENSFCAG00000014816) #26	LSS (ENSFCAG00000014817) #27	MCM3AP (ENSFCAG00000014818) #29	ENSFCAG00000032854 #28	CC2H21orf58 (ENSFCAG00000014819) #30	ENSFCAG00000052991	DIP2A (ENSFCAG00000014821) #32	S100B (ENSFCAG00000037747) #33	PRMT2 (ENSFCAG00000014823) #34	ENSFCAG00000050465
Caniformia	ANCESTRAL SPECIES		ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.a.a.b	ENSGT00940000163441.f.b.a.a.b	ENSGT00940000163441.f.b.a.a.a	ENSGT00940000155183.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Canidae	ANCESTRAL SPECIES	39	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.i #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00960000186612.A
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000161526.a.d ##7	ENSGT00940000161526.a.c ##7	ENSGT00940000163441.f.a.a.b.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.i #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00960000186612.A.h
Dog	MODERN SPECIES	24	TRPM2 (ENSCAFG00845020419)	TSPEAR (ENSCAFG00845020761) #9	ENSCAFG00845020843	ENSCAFG00845021000	ENSCAFG00845021169 ##7	ENSCAFG00845021222	UBE2G2 (ENSCAFG00845021306) #10	ENSCAFG00845021390 #11	PTTG1IP (ENSCAFG00845021456) #12	ITGB2 (ENSCAFG00845021592) #13	SLX9 (ENSCAFG00845021885) #17	ADARB1 (ENSCAFG00845021975) #18	POFUT2 (ENSCAFG00845022063) #19	COL18A1 (ENSCAFG00845022231) #20	ENSCAFG00845023388 #21	PCBP3 (ENSCAFG00845023560) #22	COL6A1 (ENSCAFG00845024031) #23	COL6A2 (ENSCAFG00845024255) #24	FTCD (ENSCAFG00845024727) #25	SPATC1L (ENSCAFG00845024849) #26	LSS (ENSCAFG00845024919) #27	MCM3AP (ENSCAFG00845025335) #29	ENSCAFG00845026433 #28	PCNT (ENSCAFG00845026638) #31	DIP2A (ENSCAFG00845027435) #32	ENSCAFG00845027798 #34
Red fox	MODERN SPECIES	209	ENSVVUG00000023954 ##7	ENSVVUG00000023950 ##7	ENSVVUG00000023938	ENSVVUG00000023934	ENSVVUG00000023932	TSPEAR (ENSVVUG00000023929) #9	UBE2G2 (ENSVVUG00000023926) #10	ENSVVUG00000023925 ##11	PTTG1IP (ENSVVUG00000023922) #12	ENSVVUG00000023920 #13	ENSVVUG00000023917 #13	ENSVVUG00000023915 #17	ADARB1 (ENSVVUG00000023911) #18	POFUT2 (ENSVVUG00000023908) #19	SLC19A1 (ENSVVUG00000023875) #21	PCBP3 (ENSVVUG00000023862) #22	ENSVVUG00000023855	COL6A2 (ENSVVUG00000023847) #24	FTCD (ENSVVUG00000023843) #25	SPATC1L (ENSVVUG00000023836) #26	LSS (ENSVVUG00000023711) #27	MCM3AP (ENSVVUG00000022975) #29	YBEY (ENSVVUG00000022948) #28	PCNT (ENSVVUG00000022919) #31	DIP2A (ENSVVUG00000020602) #32	S100B (ENSVVUG00000020498) #33	PRMT2 (ENSVVUG00000020492) #34
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
American mink	MODERN SPECIES	122	TSPEAR (ENSNVIG00000007674) #9	ENSNVIG00000007725	ENSNVIG00000007773	ENSNVIG00000007785 ##7	UBE2G2 (ENSNVIG00000007799) #10	SUMO3 (ENSNVIG00000007817) #11	PTTG1IP (ENSNVIG00000007848) #12	ITGB2 (ENSNVIG00000007863) #13	SLX9 (ENSNVIG00000008023) #17	ADARB1 (ENSNVIG00000008112) #18	ENSNVIG00000008191 #19	ENSNVIG00000008211 #19	ENSNVIG00000008220 #19	ENSNVIG00000008255 #20	ENSNVIG00000008290	PCBP3 (ENSNVIG00000008330) #22	COL6A1 (ENSNVIG00000008572) #23	ENSNVIG00000008753 #24	FTCD (ENSNVIG00000008760) #25	SPATC1L (ENSNVIG00000008811) #26	LSS (ENSNVIG00000008849) #27	MCM3AP (ENSNVIG00000008876) #29	YBEY (ENSNVIG00000008998) #28	ENSNVIG00000009125 #31	DIP2A (ENSNVIG00000009214) #32	S100B (ENSNVIG00000009347) #33	PRMT2 (ENSNVIG00000009362) #34
Ursidae	ANCESTRAL SPECIES	1	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.b.a.a.b	ENSGT00940000163441.f.b.a.a.a.c	ENSGT00940000161526.a.a ##7	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Ursus	ANCESTRAL SPECIES	94	ENSGT00940000162228	ENSGT00940000159292.a	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.a.a.b	ENSGT00940000161526.a.a ##7	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000162185 #22	ENSGT00950000183546	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a.m #32	ENSGT00530000064552	ENSGT00940000160683 #34
Polar bear	MODERN SPECIES	394	ENSUMAG00000025469	TRPM2 (ENSUMAG00000025428)	LRRC3 (ENSUMAG00000025427)	TSPEAR (ENSUMAG00000025426) #9	ENSUMAG00000025425	ENSUMAG00000025423	ENSUMAG00000025422 #7	ENSUMAG00000025421 ##7	UBE2G2 (ENSUMAG00000025420) #10	ENSUMAG00000025419 #11	PTTG1IP (ENSUMAG00000025418) #12	ITGB2 (ENSUMAG00000025417) #13	SLX9 (ENSUMAG00000025416) #17	ADARB1 (ENSUMAG00000025411) #18	POFUT2 (ENSUMAG00000025410) #19	PCBP3 (ENSUMAG00000025403) #22	ENSUMAG00000025402	COL6A2 (ENSUMAG00000025399) #24	FTCD (ENSUMAG00000025398) #25	ENSUMAG00000025397 #26	LSS (ENSUMAG00000025396) #27	MCM3AP (ENSUMAG00000025237) #29	YBEY (ENSUMAG00000025236) #28	PCNT (ENSUMAG00000025235) #31	DIP2A (ENSUMAG00000025037) #32	ENSUMAG00000025034	PRMT2 (ENSUMAG00000025033) #34
American black bear	MODERN SPECIES	1716																PCBP3 (ENSUAMG00000006491) #22	ENSUAMG00000006513	ENSUAMG00000006524
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES		ENSAMEG00000031142	ENSAMEG00000029366	ENSAMEG00000028544	ENSAMEG00000031221	ENSAMEG00000028758	ENSAMEG00000002073 #10	ENSAMEG00000002071 ##11	ENSAMEG00000025067 #12	ITGB2 (ENSAMEG00000001924) #13	ENSAMEG00000001918 #17	ADARB1 (ENSAMEG00000001885) #18	ENSAMEG00000025761 #19	ENSAMEG00000001853 #19	COL18A1 (ENSAMEG00000001767) #20	SLC19A1 (ENSAMEG00000001754) #21	PCBP3 (ENSAMEG00000001697) #22	COL6A1 (ENSAMEG00000001581) #23	COL6A2 (ENSAMEG00000001501) #24	FTCD (ENSAMEG00000001451) #25	SPATC1L (ENSAMEG00000001442) #26	LSS (ENSAMEG00000001378) #27	MCM3AP (ENSAMEG00000001319) #29	YBEY (ENSAMEG00000001317) #28	DIP2A (ENSAMEG00000001136) #32	S100B (ENSAMEG00000001133) #33	ENSAMEG00000031399 #34	ENSAMEG00000025036 ##32	ENSAMEG00000027833	ENSAMEG00000005298
Giant Panda	MODERN SPECIES	1078																ENSAMEG00000029327 #22
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Suina	ANCESTRAL SPECIES	35	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.b.b	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23
Pig	MODERN SPECIES	4	ENSSSCG00000046681	ENSSSCG00000047876	ENSSSCG00000039836	ENSSSCG00000037222 #7	ENSSSCG00000029038	ENSSSCG00000025793	UBE2G2 (ENSSSCG00000027165) #10	SUMO3 (ENSSSCG00000035795) #11	PTTG1IP (ENSSSCG00000031249) #12	ITGB2 (ENSSSCG00000025133) #13	SLX9 (ENSSSCG00000028571) #17	ADARB1 (ENSSSCG00000012089) #18	ENSSSCG00000012088 #19	COL18A1 (ENSSSCG00000038089) #20	ENSSSCG00000030696 #21	PCBP3 (ENSSSCG00000023041) #22	COL6A1 (ENSSSCG00000022506) #23
Chacoan peccary	MODERN SPECIES	790																PCBP3 (ENSCWAG00000010440) #22
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00960000186612.A.p
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000162768.B	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00960000186612.A.p
Sperm whale	MODERN SPECIES	19	DNMT3L (ENSPCTG00005016240)	AIRE (ENSPCTG00005016581)	PFKL (ENSPCTG00005017230)	SUMO3 (ENSPCTG00005017367) #11	UBE2G2 (ENSPCTG00005017422) #10	TSPEAR (ENSPCTG00005017485) #9	ENSPCTG00005017543	ENSPCTG00005017608	LRRC3 (ENSPCTG00005017660)	ENSPCTG00005017676	ENSPCTG00005017771	ITGB2 (ENSPCTG00005017857) #13	ADARB1 (ENSPCTG00005017937) #18	POFUT2 (ENSPCTG00005017994) #19	SLC19A1 (ENSPCTG00005019281) #21	PCBP3 (ENSPCTG00005019331) #22	COL6A1 (ENSPCTG00005019551)	COL6A2 (ENSPCTG00005020074) #24	FTCD (ENSPCTG00005020224) #25	SPATC1L (ENSPCTG00005020505) #26	ENSPCTG00005020548 #27	ENSPCTG00005020614	YBEY (ENSPCTG00005020716) #28	ENSPCTG00005020792 #29	DIP2A (ENSPCTG00005020857) #32	S100B (ENSPCTG00005020925) #33	PRMT2 (ENSPCTG00005000392) #34	ENSPCTG00005000466	LRRC14B (ENSPCTG00005000554)	CCDC127 (ENSPCTG00005000571)	SDHA (ENSPCTG00005000654)
Odontoceti_a	ANCESTRAL SPECIES	68																ENSGT00940000162185 #22	ENSGT00940000163601
Odontoceti_b	ANCESTRAL SPECIES	53																ENSGT00940000162185 #22	ENSGT00940000163601
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000162768.B	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00960000186612.A.p
Narwhal	MODERN SPECIES	297	DNMT3L (ENSMMNG00015001913)	AIRE (ENSMMNG00015001730)	PFKL (ENSMMNG00015001526)	CFAP410 (ENSMMNG00015001497)	TRPM2 (ENSMMNG00015001381)	TSPEAR (ENSMMNG00015001273) #9	UBE2G2 (ENSMMNG00015001235) #10	SUMO3 (ENSMMNG00015001196) #11	PTTG1IP (ENSMMNG00015001159) #12	ITGB2 (ENSMMNG00015001076) #13	SLX9 (ENSMMNG00015001036) #17	ADARB1 (ENSMMNG00015001009) #18	POFUT2 (ENSMMNG00015000876) #19	ENSMMNG00015000658	SLC19A1 (ENSMMNG00015000587) #21	PCBP3 (ENSMMNG00015000534) #22	ENSMMNG00015000412	ENSMMNG00015000368	ENSMMNG00015000354	COL6A2 (ENSMMNG00015000293) #24	FTCD (ENSMMNG00015000207) #25	SPATC1L (ENSMMNG00015000171) #26	LSS (ENSMMNG00015000081) #27	MCM3AP (ENSMMNG00015002634) #29	YBEY (ENSMMNG00015002581) #28	ENSMMNG00015002525	DIP2A (ENSMMNG00015002213) #32	S100B (ENSMMNG00015002108) #33	PRMT2 (ENSMMNG00015002069) #34
Blue whale	MODERN SPECIES	15	TRPM2 (ENSBMSG00010007233)	LRRC3 (ENSBMSG00010007273)	TSPEAR (ENSBMSG00010007281) #9	ENSBMSG00010007295	ENSBMSG00010007310	ENSBMSG00010007332 #7	UBE2G2 (ENSBMSG00010007343) #10	SUMO3 (ENSBMSG00010007354) #11	PTTG1IP (ENSBMSG00010007362) #12	ITGB2 (ENSBMSG00010007391) #13	SLX9 (ENSBMSG00010007433) #17	ADARB1 (ENSBMSG00010003764) #18	POFUT2 (ENSBMSG00010003795) #19	COL18A1 (ENSBMSG00010003836) #20	SLC19A1 (ENSBMSG00010003963) #21	PCBP3 (ENSBMSG00010003986) #22	COL6A1 (ENSBMSG00010004019) #23	COL6A2 (ENSBMSG00010004034) #24	FTCD (ENSBMSG00010004051) #25	LSS (ENSBMSG00010004134) #27	MCM3AP (ENSBMSG00010004232) #29	ENSBMSG00010004263 #28	ENSBMSG00010004286	DIP2A (ENSBMSG00010004306) #32	S100B (ENSBMSG00010004349) #33	PRMT2 (ENSBMSG00010004381) #34
Pecora	ANCESTRAL SPECIES	8	ENSGT01100000265026	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00960000186612.A.p.a	ENSGT00390000004915.b
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000012689	ENSCHYG00000012727	ENSCHYG00000012743	ENSCHYG00000012757	ENSCHYG00000012777	ENSCHYG00000012823	UBE2G2 (ENSCHYG00000013008) #10	ENSCHYG00000013089 ##11	ENSCHYG00000013199 #12	ITGB2 (ENSCHYG00000013305) #13	SLX9 (ENSCHYG00000013417) #17	ADARB1 (ENSCHYG00000013492) #18	POFUT2 (ENSCHYG00000013580) #19	ENSCHYG00000013809	SLC19A1 (ENSCHYG00000014939) #21	PCBP3 (ENSCHYG00000015231) #22	ENSCHYG00000015578	COL6A1 (ENSCHYG00000015735) #23	COL6A2 (ENSCHYG00000016288) #24	FTCD (ENSCHYG00000017995) #25	SPATC1L (ENSCHYG00000018089) #26	LSS (ENSCHYG00000018157) #27	MCM3AP (ENSCHYG00000018660) #29	YBEY (ENSCHYG00000019060) #28	PCNT (ENSCHYG00000019684) #31	DIP2A (ENSCHYG00000021088) #32	S100B (ENSCHYG00000022569) #33	PRMT2 (ENSCHYG00000022622) #34	ENSCHYG00000022791	FBXO25 (ENSCHYG00000022825)	TDRP (ENSCHYG00000022964)
Percora_a	ANCESTRAL SPECIES	7	ENSGT01100000265026	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b
Siberian musk deer	MODERN SPECIES	1185	ENSMMSG00000012695 #7	ENSMMSG00000012713	ENSMMSG00000012739	ENSMMSG00000012755	ENSMMSG00000012769	UBE2G2 (ENSMMSG00000012781) #10	ENSMMSG00000012808 ##11	PTTG1IP (ENSMMSG00000012844) #12	ITGB2 (ENSMMSG00000012884) #13	SLX9 (ENSMMSG00000012926) #17	ENSMMSG00000012948	ADARB1 (ENSMMSG00000012958) #18	POFUT2 (ENSMMSG00000012988) #19	COL18A1 (ENSMMSG00000013041) #20	SLC19A1 (ENSMMSG00000013111) #21	PCBP3 (ENSMMSG00000013149) #22	ENSMMSG00000013267	ENSMMSG00000013286	COL6A2 (ENSMMSG00000013324) #24	FTCD (ENSMMSG00000012880) #25	SPATC1L (ENSMMSG00000012984) #26	LSS (ENSMMSG00000013009) #27	MCM3AP (ENSMMSG00000013071) #29	YBEY (ENSMMSG00000013126) #28	PCNT (ENSMMSG00000013234) #31	DIP2A (ENSMMSG00000013513) #32	S100B (ENSMMSG00000013818) #33	PRMT2 (ENSMMSG00000013848) #34	ENSMMSG00000013903	FBXO25 (ENSMMSG00000013966)	TDRP (ENSMMSG00000014000)
Bovidae	ANCESTRAL SPECIES	9	ENSGT01100000265026	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b
Bovinae	ANCESTRAL SPECIES	6	ENSGT01100000265026	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b
Bos	ANCESTRAL SPECIES	7	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b	ENSGT00940000163441.f.a.b.d	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.f
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000163441.f.a.b.c.b	ENSGT00960000187239.a	ENSGT00940000161526.b.j.a #7	ENSGT00940000161526.b.i #7	ENSGT00960000187239.b	ENSGT00940000163441.f.a.b.c.a.b.a.a.a	ENSGT00940000163441.f.a.b.d	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.e
Wild yak	MODERN SPECIES	2289															SLC19A1 (ENSBMUG00000026375) #21	PCBP3 (ENSBMUG00000026399) #22
Domestic yak	MODERN SPECIES		ENSBGRG00000023571	ENSBGRG00000023608	ENSBGRG00000023634	ENSBGRG00000023648 #7	ENSBGRG00000000167	ENSBGRG00000000176	UBE2G2 (ENSBGRG00000000181) #10	ENSBGRG00000000186 ##11	PTTG1IP (ENSBGRG00000000193) #12	ITGB2 (ENSBGRG00000000208) #13	SLX9 (ENSBGRG00000000257) #17	ADARB1 (ENSBGRG00000000280) #18	POFUT2 (ENSBGRG00000000326) #19	SLC19A1 (ENSBGRG00000000631) #21	ENSBGRG00000000644	PCBP3 (ENSBGRG00000000669) #22	COL6A1 (ENSBGRG00000000813) #23	COL6A2 (ENSBGRG00000000863) #24	FTCD (ENSBGRG00000000949) #25	SPATC1L (ENSBGRG00000001038) #26	LSS (ENSBGRG00000001100) #27	MCM3AP (ENSBGRG00000001560) #29	ENSBGRG00000001586 #28	ENSBGRG00000001632 #30	ENSBGRG00000001685	DIP2A (ENSBGRG00000001765) #32	S100B (ENSBGRG00000002365) #33	PRMT2 (ENSBGRG00000002397) #34	ENSBGRG00000002455	FBXO25 (ENSBGRG00000002483)	ENSBGRG00000002585
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000163441.f.b.b.c.b	ENSGT00940000163441.f.a.b.c.b	ENSGT00940000161526.b.j.a #7	ENSGT00940000161526.b.i #7	ENSGT00960000187239.b	ENSGT00940000163441.f.a.b.c.a.b.a.a.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.f	ENSGT00390000017888	ENSGT00960000186612.A.p.a.b
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005019524	ENSBIXG00005019504	ENSBIXG00005006032	ENSBIXG00005019480 #7	ENSBIXG00005019473 #7	ENSBIXG00005019459	UBE2G2 (ENSBIXG00005019436) #10	ENSBIXG00005019400 ##11	PTTG1IP (ENSBIXG00005019381) #12	ITGB2 (ENSBIXG00005019335) #13	SLX9 (ENSBIXG00005019260) #17	ADARB1 (ENSBIXG00005019197) #18	POFUT2 (ENSBIXG00005019083) #19	COL18A1 (ENSBIXG00005018920) #20	SLC19A1 (ENSBIXG00005018773) #21	PCBP3 (ENSBIXG00005018711) #22	ENSBIXG00005018619	COL6A2 (ENSBIXG00005006450) #24	FTCD (ENSBIXG00005018494) #25	SPATC1L (ENSBIXG00005018481) #26	LSS (ENSBIXG00005018442) #27	MCM3AP (ENSBIXG00005018185) #29	YBEY (ENSBIXG00005018157) #28	ENSBIXG00005018060 #31	DIP2A (ENSBIXG00005002893) #32	S100B (ENSBIXG00005017738) #33	PRMT2 (ENSBIXG00005017685) #34	ENSBIXG00005002856	FBXO25 (ENSBIXG00005017564)	ENSBIXG00005017443	ENSBIXG00005017410
Cow	MODERN SPECIES		ENSBTAG00000052773	KRTAP10-8 (ENSBTAG00000040291)	ENSBTAG00000053056	KRTAP12-2 (ENSBTAG00000018610) #7	ENSBTAG00000051778	ENSBTAG00000050038	UBE2G2 (ENSBTAG00000048090) #10	SUMO3 (ENSBTAG00000017321) #11	PTTG1IP (ENSBTAG00000021771) #12	ITGB2 (ENSBTAG00000017060) #13	SLX9 (ENSBTAG00000017010) #17	ADARB1 (ENSBTAG00000017486) #18	POFUT2 (ENSBTAG00000007818) #19	COL18A1 (ENSBTAG00000023907) #20	SLC19A1 (ENSBTAG00000024162) #21	PCBP3 (ENSBTAG00000030775) #22	ENSBTAG00000048318	COL6A1 (ENSBTAG00000011802)	COL6A2 (ENSBTAG00000019269) #24	FTCD (ENSBTAG00000020404) #25	SPATC1L (ENSBTAG00000020409) #26	LSS (ENSBTAG00000018936) #27	MCM3AP (ENSBTAG00000003148) #29	YBEY (ENSBTAG00000003161) #28	C1H21orf58 (ENSBTAG00000021984)	PCNT (ENSBTAG00000030670) #31	DIP2A (ENSBTAG00000011495) #32	S100B (ENSBTAG00000004777) #33	PRMT2 (ENSBTAG00000005503) #34	ENSBTAG00000052513	FBXO25 (ENSBTAG00000007039)
American bison	MODERN SPECIES	2975	ENSBBBG00000003745	ENSBBBG00000015104 #7	ENSBBBG00000015117	ENSBBBG00000008155	TSPEAR (ENSBBBG00000015153) #9	UBE2G2 (ENSBBBG00000002782) #10	ENSBBBG00000015161 ##11	PTTG1IP (ENSBBBG00000015164) #12	ITGB2 (ENSBBBG00000003799) #13	SLX9 (ENSBBBG00000003802) #17	ADARB1 (ENSBBBG00000001357) #18	ENSBBBG00000001345 #19	ENSBBBG00000001334 #19	ENSBBBG00000001319 #20	SLC19A1 (ENSBBBG00000001312) #21	PCBP3 (ENSBBBG00000015403) #22	COL6A1 (ENSBBBG00000015494) #23	COL6A2 (ENSBBBG00000015610) #24	FTCD (ENSBBBG00000015621) #25	SPATC1L (ENSBBBG00000015631) #26	LSS (ENSBBBG00000002644) #27	MCM3AP (ENSBBBG00000015748) #29	YBEY (ENSBBBG00000015798) #28	ENSBBBG00000003968 #31	DIP2A (ENSBBBG00000016225) #32	S100B (ENSBBBG00000016247) #33	PRMT2 (ENSBBBG00000016343) #34	ENSBBBG00000016361	FBXO25 (ENSBBBG00000016404)	TDRP (ENSBBBG00000016413)	ENSBBBG00000016420
Caprinae	ANCESTRAL SPECIES	8	ENSGT00510000047718 #9	ENSGT00940000163441.f.a.b.c.a.b.a.a.a.a	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b	ENSGT00940000163441.f.b.b.c.b	ENSGT00940000161526.b.j.a.b #7	ENSGT00940000163441.f.a.b.c.a.a.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a	ENSGT00940000159602.c.a.a	ENSGT00940000159255
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020006738	ENSOARG00020006757 #7	ENSOARG00020006779	ENSOARG00020006827	UBE2G2 (ENSOARG00020006852) #10	ENSOARG00020006904 ##11	PTTG1IP (ENSOARG00020006978) #12	ENSOARG00020007039	ITGB2 (ENSOARG00020007059) #13	SLX9 (ENSOARG00020007156) #17	ADARB1 (ENSOARG00020007192) #18	POFUT2 (ENSOARG00020007231) #19	COL18A1 (ENSOARG00020007293) #20	SLC19A1 (ENSOARG00020007403) #21	ENSOARG00020007438	PCBP3 (ENSOARG00020007496) #22	ENSOARG00020008499	ENSOARG00020008540	COL6A2 (ENSOARG00020008627) #24	FTCD (ENSOARG00020008875) #25	SPATC1L (ENSOARG00020008907) #26	LSS (ENSOARG00020008949) #27	MCM3AP (ENSOARG00020009410) #29	YBEY (ENSOARG00020009539) #28	ATP5MD (ENSOARG00020009793)	DIP2A (ENSOARG00020009881) #32	S100B (ENSOARG00020013409) #33	PRMT2 (ENSOARG00020013448) #34	ENSOARG00020013592	FBXO25 (ENSOARG00020013642)	ENSOARG00020013896
Goat	MODERN SPECIES		ENSCHIG00000015017	ENSCHIG00000000533	ENSCHIG00000006780	ENSCHIG00000011506 #7	ENSCHIG00000024813	UBE2G2 (ENSCHIG00000006556) #10	ENSCHIG00000015930 #11	PTTG1IP (ENSCHIG00000021017) #12	ITGB2 (ENSCHIG00000014136) #13	SLX9 (ENSCHIG00000017685) #17	ADARB1 (ENSCHIG00000018259) #18	POFUT2 (ENSCHIG00000000514) #19	ENSCHIG00000020589	ENSCHIG00000013263 #20	SLC19A1 (ENSCHIG00000025066) #21	PCBP3 (ENSCHIG00000015841) #22	ENSCHIG00000004889	COL6A2 (ENSCHIG00000018004) #24	FTCD (ENSCHIG00000010407) #25	SPATC1L (ENSCHIG00000023038) #26	LSS (ENSCHIG00000013212) #27	MCM3AP (ENSCHIG00000025098) #29	YBEY (ENSCHIG00000008074) #28	ENSCHIG00000003698	DIP2A (ENSCHIG00000007147) #32	S100B (ENSCHIG00000021487) #33	PRMT2 (ENSCHIG00000011147) #34	FBXO25 (ENSCHIG00000023287)	TDRP (ENSCHIG00000018317)	ENSCHIG00000010039	ENSCHIG00000020662
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Common shrew	MODERN SPECIES	5904																ENSSARG00000007629 #22
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Primates	ANCESTRAL SPECIES	1	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000158579	ENSGT00940000163258 #8	ENSGT00940000163441.f.a.a.a	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000163845	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Lemuriformes	ANCESTRAL SPECIES	88							ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Mouse lemur	MODERN SPECIES	24	SLC37A1 (ENSMICG00000000053)	RSPH1 (ENSMICG00000000051)	UBASH3A (ENSMICG00000000050)	TMPRSS3 (ENSMICG00000005497)	TFF1 (ENSMICG00000045652)	TFF2 (ENSMICG00000011183)	UBE2G2 (ENSMICG00000013001) #10	SUMO3 (ENSMICG00000036688) #11	PTTG1IP (ENSMICG00000028388) #12	ITGB2 (ENSMICG00000002984) #13	SLX9 (ENSMICG00000047718) #17	ADARB1 (ENSMICG00000008433) #18	POFUT2 (ENSMICG00000035479) #19	COL18A1 (ENSMICG00000037125) #20	SLC19A1 (ENSMICG00000035898) #21	PCBP3 (ENSMICG00000012679) #22	ENSMICG00000033569	COL6A2 (ENSMICG00000033173) #24	FTCD (ENSMICG00000002458) #25	SPATC1L (ENSMICG00000027207) #26	LSS (ENSMICG00000004051) #27	MCM3AP (ENSMICG00000000801) #29	YBEY (ENSMICG00000000809) #28	ENSMICG00000047063 #30	PCNT (ENSMICG00000000816) #31	DIP2A (ENSMICG00000047083) #32	S100B (ENSMICG00000038064) #33	PRMT2 (ENSMICG00000015531) #34	ENSMICG00000033410	ENSMICG00000046801	ENSMICG00000046990
Lemuriformes_a	ANCESTRAL SPECIES	181							ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00940000173680	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Greater bamboo lemur	MODERN SPECIES	183											SLX9 (ENSPSMG00000024053) #17	ADARB1 (ENSPSMG00000024062) #18	POFUT2 (ENSPSMG00000024075) #19	COL18A1 (ENSPSMG00000024089) #20	SLC19A1 (ENSPSMG00000024101) #21	PCBP3 (ENSPSMG00000024176) #22	COL6A1 (ENSPSMG00000024203) #23	COL6A2 (ENSPSMG00000024283) #24	ENSPSMG00000024299	SPATC1L (ENSPSMG00000024302) #26	ENSPSMG00000024307 #27
Coquerels sifaka	MODERN SPECIES	543						ENSPCOG00000013309 #8	UBE2G2 (ENSPCOG00000026083) #10	ENSPCOG00000019098 #11	PTTG1IP (ENSPCOG00000020581) #12	ITGB2 (ENSPCOG00000014923) #13	SLX9 (ENSPCOG00000020078) #17	ADARB1 (ENSPCOG00000020406) #18	POFUT2 (ENSPCOG00000016074) #19	COL18A1 (ENSPCOG00000014698) #20	SLC19A1 (ENSPCOG00000027927) #21	PCBP3 (ENSPCOG00000013797) #22	COL6A1 (ENSPCOG00000014806) #23	COL6A2 (ENSPCOG00000016356) #24	FTCD (ENSPCOG00000021020) #25	SPATC1L (ENSPCOG00000025023) #26	LSS (ENSPCOG00000019936) #27	MCM3AP (ENSPCOG00000024498) #29	YBEY (ENSPCOG00000015606) #28	PCNT (ENSPCOG00000014872) #31	DIP2A (ENSPCOG00000016283) #32	S100B (ENSPCOG00000018301) #33	PRMT2 (ENSPCOG00000028679) #34
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000163258.j #8	ENSGT00940000164049	ENSGT00940000163527	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258.i #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000163258.j #8	ENSGT00940000158579.l.b.b.b	ENSGT00940000163258.i.b #8	ENSGT00940000163845.c	ENSGT00940000163258.i.a #8	ENSGT00940000158579.l.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00940000163258.j #8	ENSGT00940000158579.l.b.b.b	ENSGT00940000163258.i.b #8	ENSGT00940000163845.c	ENSGT00940000163258.i.a #8	ENSGT00940000158579.l.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00940000163527.d	ENSGT00940000163527.c.a	ENSGT00940000163258.i.a.a #8	ENSGT00940000158579.l.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.a.a.b.f ##11	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000018577	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Hominidae	ANCESTRAL SPECIES	25	ENSGT00940000165026.b	ENSGT00960000187213	ENSGT00940000163527.d	ENSGT00940000163527.c.a	ENSGT00940000163258.i.a.a #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000018577	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00960000187213	ENSGT00940000163527.d	ENSGT00940000163527.c.a	ENSGT00940000163258.i.a.a #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709.f #17	ENSGT00390000018577	ENSGT00390000015709.e.a #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00960000187213	ENSGT00940000163527.d	ENSGT00940000163527.c.a	ENSGT00940000163258.i.a.a #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709.f #17	ENSGT00390000018577	ENSGT00390000015709.e.a #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Pan	ANCESTRAL SPECIES	27	ENSGT00940000164049.b.a	ENSGT00940000165026.b	ENSGT00940000163527.d	ENSGT00940000163527.c.a	ENSGT00940000163258.i.a.a #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.a.a.b.f ##11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000018577	ENSGT00390000015709.e.a.a #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00530000064552	ENSGT00940000160683 #34
Bonobo	MODERN SPECIES	12	KRTAP10-9 (ENSPPAG00000030369)	KRTAP10-11 (ENSPPAG00000032384)	KRTAP12-3 (ENSPPAG00000032261)	KRTAP12-1 (ENSPPAG00000030724)	ENSPPAG00000030769 #8	UBE2G2 (ENSPPAG00000031274) #10	ENSPPAG00000031634 ##11	PTTG1IP (ENSPPAG00000032064) #12	ITGB2 (ENSPPAG00000033785) #13	ENSPPAG00000034706	ENSPPAG00000034875 #17	ADARB1 (ENSPPAG00000027139) #18	POFUT2 (ENSPPAG00000035189) #19	ENSPPAG00000014049 #20	SLC19A1 (ENSPPAG00000027716) #21	PCBP3 (ENSPPAG00000021940) #22	COL6A1 (ENSPPAG00000027819) #23	COL6A2 (ENSPPAG00000029776) #24	FTCD (ENSPPAG00000032812) #25	SPATC1L (ENSPPAG00000034632) #26	LSS (ENSPPAG00000035048) #27	MCM3AP (ENSPPAG00000025048) #29	YBEY (ENSPPAG00000030933) #28	C21orf58 (ENSPPAG00000031586) #30	PCNT (ENSPPAG00000034343) #31	DIP2A (ENSPPAG00000038882) #32	ENSPPAG00000030816	PRMT2 (ENSPPAG00000035050) #34
Chimpanzee	MODERN SPECIES	12	KRTAP10-11 (ENSPTRG00000039751)	KRTAP12-3 (ENSPTRG00000013986)	KRTAP12-1 (ENSPTRG00000031411)	ENSPTRG00000023178 #8	ENSPTRG00000040577 #8	UBE2G2 (ENSPTRG00000013990) #10	ENSPTRG00000052033 ##11	PTTG1IP (ENSPTRG00000013992) #12	ITGB2 (ENSPTRG00000013993) #13	ENSPTRG00000013994	SLX9 (ENSPTRG00000013995) #17	ADARB1 (ENSPTRG00000013997) #18	POFUT2 (ENSPTRG00000014001) #19	COL18A1 (ENSPTRG00000014005) #20	SLC19A1 (ENSPTRG00000031409) #21	PCBP3 (ENSPTRG00000014010) #22	COL6A2 (ENSPTRG00000014014) #24	ENSPTRG00000049395 #24	ENSPTRG00000047921	SPATC1L (ENSPTRG00000014016) #26	LSS (ENSPTRG00000014017) #27	MCM3AP (ENSPTRG00000014019) #29	YBEY (ENSPTRG00000014021) #28	C21H21orf58 (ENSPTRG00000014022) #30	PCNT (ENSPTRG00000014023) #31	DIP2A (ENSPTRG00000014025) #32	S100B (ENSPTRG00000014026)	PRMT2 (ENSPTRG00000014027) #34
Human	MODERN SPECIES	13	KRTAP10-11 (ENSG00000243489)	KRTAP12-4 (ENSG00000212933)	KRTAP12-3 (ENSG00000205439)	KRTAP12-2 (ENSG00000221864)	KRTAP12-1 (ENSG00000187175)	KRTAP10-12 (ENSG00000189169) #8	UBE2G2 (ENSG00000184787) #10	SUMO3 (ENSG00000184900) #11	PTTG1IP (ENSG00000183255) #12	ITGB2 (ENSG00000160255) #13	SLX9 (ENSG00000160256) #17	ADARB1 (ENSG00000197381) #18	POFUT2 (ENSG00000186866) #19	COL18A1 (ENSG00000182871) #20	SLC19A1 (ENSG00000173638) #21	PCBP3 (ENSG00000183570) #22	COL6A1 (ENSG00000142156) #23	COL6A2 (ENSG00000142173) #24	FTCD (ENSG00000160282) #25	SPATC1L (ENSG00000160284) #26	LSS (ENSG00000160285) #27	MCM3AP (ENSG00000160294) #29	YBEY (ENSG00000182362) #28	C21orf58 (ENSG00000160298) #30	PCNT (ENSG00000160299) #31	ENSG00000286224	DIP2A (ENSG00000160305) #32	S100B (ENSG00000160307) #33	PRMT2 (ENSG00000160310) #34
Gorilla	MODERN SPECIES	12	ENSGGOG00000038975	KRTAP10-8 (ENSGGOG00000007320) #8	ENSGGOG00000038357	ENSGGOG00000036857	KRTAP10-12 (ENSGGOG00000012454) #8	UBE2G2 (ENSGGOG00000038153) #10	ENSGGOG00000022636 ##11	PTTG1IP (ENSGGOG00000002077) #12	ITGB2 (ENSGGOG00000014457) #13	ENSGGOG00000014477	ENSGGOG00000014482 #17	ADARB1 (ENSGGOG00000013244) #18	POFUT2 (ENSGGOG00000015065) #19	ENSGGOG00000011704 #20	SLC19A1 (ENSGGOG00000011734) #21	PCBP3 (ENSGGOG00000003683) #22	COL6A1 (ENSGGOG00000001462) #23	COL6A2 (ENSGGOG00000003661) #24	FTCD (ENSGGOG00000002869) #25	SPATC1L (ENSGGOG00000012943) #26	LSS (ENSGGOG00000015701) #27	MCM3AP (ENSGGOG00000015716) #29	YBEY (ENSGGOG00000015733) #28	C21orf58 (ENSGGOG00000041767) #30	PCNT (ENSGGOG00000011788) #31	DIP2A (ENSGGOG00000011841) #32	ENSGGOG00000027399	PRMT2 (ENSGGOG00000010719) #34
Orangutan	MODERN SPECIES	12	KRTAP10-10 (ENSPPYG00000011496)	KRTAP10-11 (ENSPPYG00000011497)	KRTAP12-3 (ENSPPYG00000011499)	ENSPPYG00000033473	KRTAP10-12 (ENSPPYG00000011501) #8	UBE2G2 (ENSPPYG00000035359) #10	ENSPPYG00000011503 #11	PTTG1IP (ENSPPYG00000036754) #12	ITGB2 (ENSPPYG00000011506) #13	ENSPPYG00000031942	SLX9 (ENSPPYG00000011509) #17	ADARB1 (ENSPPYG00000011514) #18	POFUT2 (ENSPPYG00000011516) #19	ENSPPYG00000011521 #20	SLC19A1 (ENSPPYG00000011523) #21	PCBP3 (ENSPPYG00000011525) #22	COL6A1 (ENSPPYG00000034634) #23	COL6A2 (ENSPPYG00000011527) #24	FTCD (ENSPPYG00000011528) #25	SPATC1L (ENSPPYG00000011529) #26	LSS (ENSPPYG00000011530) #27	MCM3AP (ENSPPYG00000011532) #29	ENSPPYG00000011535 #28	C21orf58 (ENSPPYG00000011536) #30	PCNT (ENSPPYG00000011537) #31	DIP2A (ENSPPYG00000011538) #32	S100B (ENSPPYG00000011539) #33	PRMT2 (ENSPPYG00000011540) #34
Gibbon	MODERN SPECIES	17	ENSNLEG00000032715	ENSNLEG00000002313	ENSNLEG00000035625	KRTAP12-1 (ENSNLEG00000002334)	ENSNLEG00000031883 #8	ENSNLEG00000032236	UBE2G2 (ENSNLEG00000002335) #10	ENSNLEG00000030138 ##11	PTTG1IP (ENSNLEG00000002398) #12	ITGB2 (ENSNLEG00000002418) #13	ENSNLEG00000002454	SLX9 (ENSNLEG00000002488) #17	ADARB1 (ENSNLEG00000002514) #18	ENSNLEG00000002577 #19	ENSNLEG00000002591 #20	PCBP3 (ENSNLEG00000002639) #22	ENSNLEG00000002651	COL6A2 (ENSNLEG00000002670) #24	ENSNLEG00000002699 #25	SPATC1L (ENSNLEG00000002707) #26	LSS (ENSNLEG00000002728) #27	MCM3AP (ENSNLEG00000002880) #29	ENSNLEG00000031884	C21orf58 (ENSNLEG00000003101) #30	PCNT (ENSNLEG00000003144) #31	DIP2A (ENSNLEG00000003222) #32	ENSNLEG00000003320	PRMT2 (ENSNLEG00000003330) #34
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00940000158579.l.b.b.a.e	ENSGT00940000163845.c	ENSGT00940000163258.i.b #8	ENSGT00940000158579.l.b.b.b	ENSGT00940000163258.j #8	ENSGT00940000158579.l.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00940000163258.i.b #8	ENSGT00940000158579.l.b.b.b	ENSGT00940000163527.c.c	ENSGT00940000164049.b.a	ENSGT00940000163527.d	ENSGT00940000163527.c.d	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b.f #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00510000047718 #9	ENSGT00940000158579.l.b.a	ENSGT00940000163845.c	ENSGT00940000163258.i.b #8	ENSGT00940000164049.b.a	ENSGT00940000163527.c.d	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b.f #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Pig-tailed macaque	MODERN SPECIES	503	KRTAP10-10 (ENSMNEG00000043599)	KRTAP10-9 (ENSMNEG00000036736)	ENSMNEG00000043238	ENSMNEG00000009948	ENSMNEG00000028794	TSPEAR (ENSMNEG00000045469) #9	UBE2G2 (ENSMNEG00000028583) #10	ENSMNEG00000045199 ##11	PTTG1IP (ENSMNEG00000030046) #12	ITGB2 (ENSMNEG00000031016) #13	SLX9 (ENSMNEG00000044629) #17	ADARB1 (ENSMNEG00000031543) #18	POFUT2 (ENSMNEG00000041753) #19	COL18A1 (ENSMNEG00000032048) #20	SLC19A1 (ENSMNEG00000029970) #21	PCBP3 (ENSMNEG00000035551) #22	COL6A1 (ENSMNEG00000043587) #23	COL6A2 (ENSMNEG00000035628) #24	FTCD (ENSMNEG00000045053) #25	SPATC1L (ENSMNEG00000028822) #26	LSS (ENSMNEG00000044250) #27	MCM3AP (ENSMNEG00000029780) #29	YBEY (ENSMNEG00000039114) #28	C21orf58 (ENSMNEG00000029851) #30	PCNT (ENSMNEG00000036330) #31	DIP2A (ENSMNEG00000040653) #32	ENSMNEG00000034764	PRMT2 (ENSMNEG00000038764) #34
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00940000158579.l.b.b.a.e	ENSGT00940000158579.l.b.a	ENSGT00940000163258.i.b #8	ENSGT00940000164049.b.a	ENSGT00940000163527.c.d	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b.f #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Rhesus	MODERN SPECIES	13	ENSMMUG00000030497	KRTAP10-8 (ENSMMUG00000048049) #8	KRTAP10-9 (ENSMMUG00000043221)	ENSMMUG00000022561	TSPEAR (ENSMMUG00000022556) #9	UBE2G2 (ENSMMUG00000045077) #10	SUMO3 (ENSMMUG00000048545) #11	PTTG1IP (ENSMMUG00000046352) #12	ITGB2 (ENSMMUG00000000951) #13	SLX9 (ENSMMUG00000000953) #17	ENSMMUG00000061023	ADARB1 (ENSMMUG00000010695) #18	POFUT2 (ENSMMUG00000010700) #19	COL18A1 (ENSMMUG00000004472) #20	SLC19A1 (ENSMMUG00000004477) #21	PCBP3 (ENSMMUG00000003825) #22	COL6A1 (ENSMMUG00000000544) #23	ENSMMUG00000055486	COL6A2 (ENSMMUG00000022317) #24	FTCD (ENSMMUG00000022324) #25	SPATC1L (ENSMMUG00000058335) #26	ENSMMUG00000064313	LSS (ENSMMUG00000022329) #27	MCM3AP (ENSMMUG00000022331) #29	YBEY (ENSMMUG00000012911) #28	C3H21orf58 (ENSMMUG00000039473) #30	PCNT (ENSMMUG00000012914) #31	DIP2A (ENSMMUG00000015797) #32	S100B (ENSMMUG00000063077) #33	PRMT2 (ENSMMUG00000015803) #34	ENSMMUG00000053532
Crab-eating macaque	MODERN SPECIES	13	LRRC3 (ENSMFAG00000028969)	KRTAP10-4 (ENSMFAG00000031679)	KRTAP10-9 (ENSMFAG00000053657)	KRTAP10-7 (ENSMFAG00000051280)	TSPEAR (ENSMFAG00000001348) #9	UBE2G2 (ENSMFAG00000057431) #10	ENSMFAG00000032355 #11	PTTG1IP (ENSMFAG00000033191) #12	ITGB2 (ENSMFAG00000036141) #13	SLX9 (ENSMFAG00000037615) #17	ADARB1 (ENSMFAG00000011312) #18	ENSMFAG00000003616 #19	SLC19A1 (ENSMFAG00000041513) #21	ENSMFAG00000056786	ENSMFAG00000053223	PCBP3 (ENSMFAG00000034574) #22	ENSMFAG00000003504	ENSMFAG00000060948	FTCD (ENSMFAG00000039806) #25	SPATC1L (ENSMFAG00000031624) #26	LSS (ENSMFAG00000034060) #27	MCM3AP (ENSMFAG00000041104) #29	ENSMFAG00000014564 #28	C21orf58 (ENSMFAG00000041495) #30	ENSMFAG00000059298	ENSMFAG00000047423	DIP2A (ENSMFAG00000034305) #32	ENSMFAG00000053934	ENSMFAG00000033124	PRMT2 (ENSMFAG00000003831) #34	ENSMFAG00000056988
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00940000163845.c	ENSGT00940000163258.i.b #8	ENSGT00940000158579.l.b.b.b	ENSGT00940000163527.c.c	ENSGT00940000163527.d	ENSGT00940000163527.c.d	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.a.a #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00940000163845.c	ENSGT00940000163258.i.b #8	ENSGT00940000158579.l.b.b.b	ENSGT00940000163527.c.c	ENSGT00940000163527.c.d	ENSGT00940000158579.l.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.a.a #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00530000064552	ENSGT00940000160683 #34
Sooty mangabey	MODERN SPECIES	465	KRTAP10-7 (ENSCATG00000040066)	KRTAP10-8 (ENSCATG00000040413) #8	ENSCATG00000013543	ENSCATG00000040752	ENSCATG00000042131	ENSCATG00000044136	UBE2G2 (ENSCATG00000012779) #10	ENSCATG00000041498 ##11	PTTG1IP (ENSCATG00000033867) #12	ITGB2 (ENSCATG00000039608) #13	SLX9 (ENSCATG00000019293) #17	ADARB1 (ENSCATG00000029876) #18	POFUT2 (ENSCATG00000034952) #19	COL18A1 (ENSCATG00000038222) #20	SLC19A1 (ENSCATG00000036905) #21	PCBP3 (ENSCATG00000038419) #22	COL6A1 (ENSCATG00000040431) #23	COL6A2 (ENSCATG00000041547) #24	FTCD (ENSCATG00000041690) #25	SPATC1L (ENSCATG00000037303) #26	LSS (ENSCATG00000038397) #27	MCM3AP (ENSCATG00000039155) #29	YBEY (ENSCATG00000035660) #28	C21orf58 (ENSCATG00000007258) #30	PCNT (ENSCATG00000040523) #31	DIP2A (ENSCATG00000025334) #32	ENSCATG00000037851	PRMT2 (ENSCATG00000031360) #34
Drill	MODERN SPECIES	1221																PCBP3 (ENSMLEG00000038785) #22	COL6A1 (ENSMLEG00000029822) #23	COL6A2 (ENSMLEG00000017555) #24	FTCD (ENSMLEG00000008656) #25	SPATC1L (ENSMLEG00000028783) #26	LSS (ENSMLEG00000033329) #27	MCM3AP (ENSMLEG00000041901) #29	YBEY (ENSMLEG00000034149) #28	ENSMLEG00000033463	PCNT (ENSMLEG00000036135) #31	DIP2A (ENSMLEG00000040859) #32	ENSMLEG00000030850	PRMT2 (ENSMLEG00000041912) #34	ENSMLEG00000043464	ENSMLEG00000032551
Olive baboon	MODERN SPECIES	14	ENSPANG00000049222	KRTAP10-4 (ENSPANG00000006270)	KRTAP10-8 (ENSPANG00000045294) #8	ENSPANG00000047848	ENSPANG00000048933	ENSPANG00000042415	ENSPANG00000040535	UBE2G2 (ENSPANG00000032157) #10	ENSPANG00000031359 ##11	PTTG1IP (ENSPANG00000005642) #12	ITGB2 (ENSPANG00000023629) #13	SLX9 (ENSPANG00000021083) #17	ADARB1 (ENSPANG00000020871) #18	POFUT2 (ENSPANG00000023630) #19	SLC19A1 (ENSPANG00000017097) #21	PCBP3 (ENSPANG00000023631) #22	ENSPANG00000022692	ENSPANG00000048117	COL6A2 (ENSPANG00000024175) #24	FTCD (ENSPANG00000008270) #25	SPATC1L (ENSPANG00000017098) #26	LSS (ENSPANG00000019152) #27	MCM3AP (ENSPANG00000024225) #29	YBEY (ENSPANG00000024224) #28	C21orf58 (ENSPANG00000024223) #30	ENSPANG00000049667	PCNT (ENSPANG00000008159) #31	DIP2A (ENSPANG00000022431) #32	S100B (ENSPANG00000042633) #33	PRMT2 (ENSPANG00000019949) #34	ENSPANG00000045615
Rhinopithecus	ANCESTRAL SPECIES	210				ENSGT00940000158579.l.b.b.b	ENSGT00940000163258.j #8	ENSGT00940000158579.l.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162768.B	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00530000064552	ENSGT00940000160683 #34
Golden snub-nosed monkey	MODERN SPECIES	1482											SLX9 (ENSRROG00000045309) #17	ADARB1 (ENSRROG00000042856) #18	POFUT2 (ENSRROG00000036833) #19	COL18A1 (ENSRROG00000041309) #20	SLC19A1 (ENSRROG00000032854) #21	PCBP3 (ENSRROG00000034567) #22	COL6A1 (ENSRROG00000034310) #23	COL6A2 (ENSRROG00000038780) #24	FTCD (ENSRROG00000045071) #25	SPATC1L (ENSRROG00000030883) #26	LSS (ENSRROG00000040461) #27	MCM3AP (ENSRROG00000006150) #29	YBEY (ENSRROG00000039507) #28	C21orf58 (ENSRROG00000043985) #30	PCNT (ENSRROG00000034301) #31	DIP2A (ENSRROG00000034962) #32	ENSRROG00000029645	PRMT2 (ENSRROG00000041142) #34
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.b	ENSGT00510000047718 #9	ENSGT00940000163845.d	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.a.b	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Cebidae	ANCESTRAL SPECIES	32	ENSGT00940000163258.i.b #8	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.b	ENSGT00510000047718 #9	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.a.b	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00530000064552	ENSGT00940000160683 #34
Marmoset	MODERN SPECIES	13	ENSCJAG00000052337	ENSCJAG00000000296	ENSCJAG00000000301	ENSCJAG00000063198	UBE2G2 (ENSCJAG00000041224) #10	SUMO3 (ENSCJAG00000010529) #11	PTTG1IP (ENSCJAG00000085899) #12	ITGB2 (ENSCJAG00000010554) #13	SLX9 (ENSCJAG00000010599) #17	ENSCJAG00000071675	ADARB1 (ENSCJAG00000018646) #18	ENSCJAG00000081850 #19	COL18A1 (ENSCJAG00000083421) #20	ENSCJAG00000081985	SLC19A1 (ENSCJAG00000001943) #21	PCBP3 (ENSCJAG00000077507) #22	COL6A1 (ENSCJAG00000078346) #23	COL6A2 (ENSCJAG00000001863) #24	FTCD (ENSCJAG00000080609) #25	SPATC1L (ENSCJAG00000085076) #26	LSS (ENSCJAG00000086602) #27	MCM3AP (ENSCJAG00000001770) #29	YBEY (ENSCJAG00000080541) #28	ENSCJAG00000001809	PCNT (ENSCJAG00000075934) #31	DIP2A (ENSCJAG00000001624) #32	ENSCJAG00000001606	PRMT2 (ENSCJAG00000001571) #34	ENSCJAG00000074974
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.b	ENSGT00510000047718 #9	ENSGT00940000158579.l.b.b.a.a.a	ENSGT00940000158579.l.b.b.b	ENSGT00940000158579.l.b.b.a.a.b	ENSGT00940000158193 #10	ENSGT00950000182895.a.a.a.b.f ##11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b.s #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00530000064552	ENSGT00940000160683 #34
Capuchin	MODERN SPECIES	112	ENSCCAG00000035894	ENSCCAG00000021982	KRTAP10-9 (ENSCCAG00000027895)	KRTAP10-12 (ENSCCAG00000021834) #8	ENSCCAG00000013274	TSPEAR (ENSCCAG00000034859) #9	UBE2G2 (ENSCCAG00000035488) #10	ENSCCAG00000024614 ##11	PTTG1IP (ENSCCAG00000030590) #12	ITGB2 (ENSCCAG00000001137) #13	SLX9 (ENSCCAG00000036236) #17	ADARB1 (ENSCCAG00000029934) #18	POFUT2 (ENSCCAG00000020926) #19	COL18A1 (ENSCCAG00000036606) #20	SLC19A1 (ENSCCAG00000026323) #21	PCBP3 (ENSCCAG00000024561) #22	COL6A1 (ENSCCAG00000028601) #23	COL6A2 (ENSCCAG00000027356) #24	FTCD (ENSCCAG00000009041) #25	SPATC1L (ENSCCAG00000030470) #26	LSS (ENSCCAG00000022848) #27	MCM3AP (ENSCCAG00000032869) #29	YBEY (ENSCCAG00000035845) #28	C21orf58 (ENSCCAG00000032298) #30	PCNT (ENSCCAG00000036461) #31	DIP2A (ENSCCAG00000026675) #32	ENSCCAG00000016321	PRMT2 (ENSCCAG00000028685) #34	ENSCCAG00000027671
Bolivian squirrel monkey	MODERN SPECIES	155	TPO (ENSSBOG00000032700)	PXDN (ENSSBOG00000024455)	MYT1L (ENSSBOG00000029796)	EIPR1 (ENSSBOG00000030265)	ENSSBOG00000022279	ADI1 (ENSSBOG00000029318)	RNASEH1 (ENSSBOG00000025411)	ENSSBOG00000022415	COLEC11 (ENSSBOG00000026886)	ALLC (ENSSBOG00000025429)	DCDC2C (ENSSBOG00000023428)	ENSSBOG00000021838	POFUT2 (ENSSBOG00000026751) #19	COL18A1 (ENSSBOG00000026331) #20	SLC19A1 (ENSSBOG00000024098) #21	PCBP3 (ENSSBOG00000005789) #22	COL6A1 (ENSSBOG00000033262) #23	COL6A2 (ENSSBOG00000024612) #24	FTCD (ENSSBOG00000032120) #25	SPATC1L (ENSSBOG00000028722) #26	LSS (ENSSBOG00000030101) #27	MCM3AP (ENSSBOG00000024259) #29	YBEY (ENSSBOG00000030954) #28	ENSSBOG00000029549 #30	PCNT (ENSSBOG00000031686) #31	ENSSBOG00000034552	DIP2A (ENSSBOG00000027645) #32	ENSSBOG00000027563	PRMT2 (ENSSBOG00000030953) #34
Tarsier	MODERN SPECIES	757																PCBP3 (ENSTSYG00000005254) #22
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #8	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Tree shrew	MODERN SPECIES	4449																ENSTBEG00000011882 #22	ENSTBEG00000012072
Glires	ANCESTRAL SPECIES	2	ENSGT00510000047718 #9	ENSGT00940000163258 #8	ENSGT00940000163441.f.a.a.a	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00950000182836.b.b.b.a	ENSGT00390000011821.b	ENSGT00940000154826	ENSGT00390000003874	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00950000182836.b.b.b.a	ENSGT00390000011821.b	ENSGT00940000154826	ENSGT00390000003874	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Guinea pig	MODERN SPECIES	110													POFUT2 (ENSCPOG00000009385) #19	COL18A1 (ENSCPOG00000020725) #20	SLC19A1 (ENSCPOG00000023229) #21	PCBP3 (ENSCPOG00000003648) #22	ENSCPOG00000030777	COL6A2 (ENSCPOG00000021819) #24	FTCD (ENSCPOG00000026874) #25	SPATC1L (ENSCPOG00000008358) #26	LSS (ENSCPOG00000013859) #27	MCM3AP (ENSCPOG00000002407) #29	YBEY (ENSCPOG00000002415) #28	ENSCPOG00000010788 #30	PCNT (ENSCPOG00000015488) #31	DIP2A (ENSCPOG00000003803) #32	S100B (ENSCPOG00000037925) #33	PRMT2 (ENSCPOG00000019877) #34	ENSCPOG00000024671
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00950000182836.b.b.b.a	ENSGT00390000011821.b	ENSGT00940000154826	ENSGT00390000003874	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000158193 #10	ENSGT00950000182895.a.a.a.b.f ##11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Long-tailed chinchilla	MODERN SPECIES	114	ENSCLAG00000005431	ENSCLAG00000007645 #8	ENSCLAG00000004501	ENSCLAG00000005246 #8	ENSCLAG00000005933	ENSCLAG00000006283	UBE2G2 (ENSCLAG00000006675) #10	ENSCLAG00000006914 ##11	PTTG1IP (ENSCLAG00000008686) #12	ITGB2 (ENSCLAG00000011530) #13	SLX9 (ENSCLAG00000015540) #17	ADARB1 (ENSCLAG00000010595) #18	POFUT2 (ENSCLAG00000014869) #19	COL18A1 (ENSCLAG00000009590) #20	SLC19A1 (ENSCLAG00000005746) #21	PCBP3 (ENSCLAG00000006667) #22	COL6A1 (ENSCLAG00000004686) #23	COL6A2 (ENSCLAG00000009215) #24	FTCD (ENSCLAG00000014029) #25	SPATC1L (ENSCLAG00000016436) #26	LSS (ENSCLAG00000011987) #27	MCM3AP (ENSCLAG00000013358) #29	YBEY (ENSCLAG00000006892) #28	ENSCLAG00000007820 #30	PCNT (ENSCLAG00000012697) #31	DIP2A (ENSCLAG00000013614) #32	S100B (ENSCLAG00000009038) #33	PRMT2 (ENSCLAG00000006778) #34
Degu	MODERN SPECIES	86	ENSODEG00000013954	PWP2 (ENSODEG00000013073)	ENSODEG00000013648	AGPAT3 (ENSODEG00000012787)	PDXK (ENSODEG00000013386)	TSPEAR (ENSODEG00000013818) #9	ENSODEG00000013439	ENSODEG00000014012 #10	ENSODEG00000013838 ##11	PTTG1IP (ENSODEG00000013537) #12	ITGB2 (ENSODEG00000013569) #13	ADARB1 (ENSODEG00000014508) #18	POFUT2 (ENSODEG00000013451) #19	ENSODEG00000020203	ENSODEG00000013398	PCBP3 (ENSODEG00000012873) #22	ENSODEG00000013981	ENSODEG00000020105	COL6A2 (ENSODEG00000013531) #24	FTCD (ENSODEG00000013308) #25	SPATC1L (ENSODEG00000013418) #26	LSS (ENSODEG00000014728) #27	MCM3AP (ENSODEG00000013662) #29	YBEY (ENSODEG00000014950) #28	DIP2A (ENSODEG00000013484) #32	PRMT2 (ENSODEG00000013920) #34	IGFBPL1 (ENSODEG00000013895)	ALDH1B1 (ENSODEG00000014240)	SHB (ENSODEG00000013286)	ENSODEG00000020274	DCAF10 (ENSODEG00000015520)
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000007283 #8	ENSHGLG00000038544	ENSHGLG00000043957	ENSHGLG00000005505	ENSHGLG00000014199 #9	ENSHGLG00000009258 #10	ENSHGLG00000037860 #11	PTTG1IP (ENSHGLG00000033185) #12	ENSHGLG00000049629	ITGB2 (ENSHGLG00000013472) #13	SLX9 (ENSHGLG00000045493) #17	ADARB1 (ENSHGLG00000005906) #18	POFUT2 (ENSHGLG00000041783) #19	ENSHGLG00000018308 #20	SLC19A1 (ENSHGLG00000013143) #21	PCBP3 (ENSHGLG00000018620) #22	COL6A1 (ENSHGLG00000017878) #23	COL6A2 (ENSHGLG00000009116) #24	FTCD (ENSHGLG00000048038) #25	SPATC1L (ENSHGLG00000013076) #26	LSS (ENSHGLG00000008767) #27	ENSHGLG00000012528 #29	RCAN1 (ENSHGLG00000033178)	KCNE1 (ENSHGLG00000035496)	ENSHGLG00000016289	ENSHGLG00000040274	KCNE2 (ENSHGLG00000047687)	ENSHGLG00000021210	SLC5A3 (ENSHGLG00000038228)	ENSHGLG00000010278	ENSHGLG00000040041
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989.h #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.o #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989.h #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000160683 #34
Marmotini_b	ANCESTRAL SPECIES	182						ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j.n.a #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989.h #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000160683 #34
Arctic ground squirrel	MODERN SPECIES	835																PCBP3 (ENSUPAG00010002550) #22	COL6A1 (ENSUPAG00010002516) #23
Squirrel	MODERN SPECIES	378	ENSSTOG00000020813	ENSSTOG00000020703	ENSSTOG00000032824	ENSSTOG00000031377	ENSSTOG00000029592	TSPEAR (ENSSTOG00000022950) #9	UBE2G2 (ENSSTOG00000007968) #10	ENSSTOG00000010587 #11	PTTG1IP (ENSSTOG00000021779) #12	ITGB2 (ENSSTOG00000001412) #13	SLX9 (ENSSTOG00000028031) #17	ADARB1 (ENSSTOG00000015792) #18	POFUT2 (ENSSTOG00000028617) #19	ENSSTOG00000027467 #20	SLC19A1 (ENSSTOG00000007113) #21	PCBP3 (ENSSTOG00000007178) #22	ENSSTOG00000022346	COL6A2 (ENSSTOG00000024366) #24	FTCD (ENSSTOG00000020132) #25	SPATC1L (ENSSTOG00000026388) #26	LSS (ENSSTOG00000007503) #27	MCM3AP (ENSSTOG00000007531) #29	YBEY (ENSSTOG00000029373) #28	ENSSTOG00000031143 #30	PCNT (ENSSTOG00000007621) #31	DIP2A (ENSSTOG00000007172) #32	PRMT2 (ENSSTOG00000016495) #34
Alpin marmot	MODERN SPECIES	4	LRRC3 (ENSMMMG00000012614)	TSPEAR (ENSMMMG00000012623) #9	ENSMMMG00000012640 #8	ENSMMMG00000012650	ENSMMMG00000012657 #7	UBE2G2 (ENSMMMG00000012664) #10	ENSMMMG00000012676	SUMO3 (ENSMMMG00000012686) #11	ENSMMMG00000012708 #12	ITGB2 (ENSMMMG00000012709) #13	SLX9 (ENSMMMG00000012725) #17	ADARB1 (ENSMMMG00000012767) #18	POFUT2 (ENSMMMG00000012809) #19	ENSMMMG00000012904 #20	SLC19A1 (ENSMMMG00000012919) #21	PCBP3 (ENSMMMG00000012976) #22	ENSMMMG00000013027	COL6A2 (ENSMMMG00000013048) #24	ENSMMMG00000013067 #24	FTCD (ENSMMMG00000013068) #25	SPATC1L (ENSMMMG00000013131) #26	LSS (ENSMMMG00000013141) #27	MCM3AP (ENSMMMG00000013170) #29	ENSMMMG00000013208 #30	PCNT (ENSMMMG00000013242) #31	DIP2A (ENSMMMG00000013393) #32	ENSMMMG00000013510	PRMT2 (ENSMMMG00000013520) #34
Eurasian red squirrel	MODERN SPECIES	1	TRPM2 (ENSSVLG00005023598)	LRRC3 (ENSSVLG00005023556)	ENSSVLG00005023369 #8	ENSSVLG00005023080	ENSSVLG00005022707	ENSSVLG00005022624	TSPEAR (ENSSVLG00005022529) #9	UBE2G2 (ENSSVLG00005022482) #10	ENSSVLG00005022452 #11	ENSSVLG00005022355 #12	ITGB2 (ENSSVLG00005022020) #13	SLX9 (ENSSVLG00005021933) #17	ADARB1 (ENSSVLG00005021761) #18	POFUT2 (ENSSVLG00005021705) #19	SLC19A1 (ENSSVLG00005020132) #21	PCBP3 (ENSSVLG00005019852) #22	COL6A1 (ENSSVLG00005019712) #23	COL6A2 (ENSSVLG00005019580) #24	ENSSVLG00005019331 #25	ENSSVLG00005019107 #25	SPATC1L (ENSSVLG00005019009) #26	LSS (ENSSVLG00005018385) #27	MCM3AP (ENSSVLG00005018327) #29	YBEY (ENSSVLG00005018192) #28	ENSSVLG00005018102 #30	ENSSVLG00005018080	DIP2A (ENSSVLG00005015407) #32	S100B (ENSSVLG00005014991) #33	PRMT2 (ENSSVLG00005014458) #34
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000161526.b #7	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Kangaroo rat	MODERN SPECIES	478	ENSDORG00000028505	ENSDORG00000029443 #7	ENSDORG00000024465 #7	ENSDORG00000026443 #7	ENSDORG00000019765 #7	ENSDORG00000014492	Ube2g2 (ENSDORG00000025137) #10	Sumo3 (ENSDORG00000025904) #11	Pttg1ip (ENSDORG00000028984) #12	ENSDORG00000012531 #13	Fam207a (ENSDORG00000028131) #17	Adarb1 (ENSDORG00000000619) #18	Pofut2 (ENSDORG00000009350) #19	ENSDORG00000011477	Slc19a1 (ENSDORG00000008087) #21	Pcbp3 (ENSDORG00000003640) #22	ENSDORG00000004103	Col6a2 (ENSDORG00000028732) #24	Ftcd (ENSDORG00000004547) #25	Spatc1l (ENSDORG00000010414) #26	Lss (ENSDORG00000010415) #27	Mcm3ap (ENSDORG00000004416) #29	Ybey (ENSDORG00000024242) #28	ENSDORG00000007242 #30	Pcnt (ENSDORG00000007244) #31	ENSDORG00000027954	Dip2a (ENSDORG00000012447) #32	S100b (ENSDORG00000013831) #33
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000161526.b #7	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Muroidea	ANCESTRAL SPECIES	11	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183	ENSGT00940000161526.b #7	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183.e	ENSGT00940000161526.b #7	ENSGT00940000155183.f	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183.e.a.b	ENSGT00940000161526.b #7	ENSGT00940000155183.f	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00510000047718 #9	ENSGT00940000155183.e.a.b.a.b	ENSGT00940000161526.b #7	ENSGT00940000155183.f	ENSGT00940000155183.e.a.b.a.a	ENSGT00940000155183.e.a.a.b.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000161054	ENSGT00940000163531
Golden Hamster	MODERN SPECIES	641	ENSMAUG00000012939	ENSMAUG00000007884 #7	ENSMAUG00000021981 #7	ENSMAUG00000002462 #7	ENSMAUG00000021040	Ube2g2 (ENSMAUG00000022077) #10	Sumo3 (ENSMAUG00000009748) #11	Pttg1ip (ENSMAUG00000010900) #12	ENSMAUG00000021821 #13	Fam207a (ENSMAUG00000009365) #17	Adarb1 (ENSMAUG00000009334) #18	Pofut2 (ENSMAUG00000006922) #19	Col18a1 (ENSMAUG00000008076) #20	Slc19a1 (ENSMAUG00000007979) #21	ENSMAUG00000012520	Pcbp3 (ENSMAUG00000007036) #22	ENSMAUG00000020615	Col6a2 (ENSMAUG00000022073) #24	Ftcd (ENSMAUG00000004152) #25	Spatc1l (ENSMAUG00000006869) #26	Lss (ENSMAUG00000005365) #27	Mcm3ap (ENSMAUG00000008393) #29	ENSMAUG00000002217	Ybey (ENSMAUG00000005858) #28	2610028H24Rik (ENSMAUG00000009720) #30	Pcnt (ENSMAUG00000022248) #31	Dip2a (ENSMAUG00000018650) #32	S100b (ENSMAUG00000015774) #33	Prmt2 (ENSMAUG00000017688) #34	Slc5a4a (ENSMAUG00000019866)	Zfp280b (ENSMAUG00000015647)
Chinese hamster chok1gshd	MODERN SPECIES	204	ENSCGRG00001018033	ENSCGRG00001012982	ENSCGRG00001016181 #7	ENSCGRG00001013697 #7	ENSCGRG00001023741	ENSCGRG00001011367	Ube2g2 (ENSCGRG00001012138) #10	Sumo3 (ENSCGRG00001014923) #11	Pttg1ip (ENSCGRG00001000333) #12	Itgb2 (ENSCGRG00001016235) #13	Fam207a (ENSCGRG00001016236) #17	Adarb1 (ENSCGRG00001023922) #18	Pofut2 (ENSCGRG00001022765) #19	Col18a1 (ENSCGRG00001013369) #20	SLC19A1 (ENSCGRG00001016846) #21	Pcbp3 (ENSCGRG00001006836) #22	Col6a1 (ENSCGRG00001017421) #23	Col6a2 (ENSCGRG00001003342) #24	Ftcd (ENSCGRG00001011730) #25	Spatc1l (ENSCGRG00001017850) #26	Lss (ENSCGRG00001020282) #27	Mcm3ap (ENSCGRG00001015274) #29	Ybey (ENSCGRG00001022036) #28	2610028H24Rik (ENSCGRG00001023849) #30	Pcnt (ENSCGRG00001017614) #31	Dip2a (ENSCGRG00001004170) #32	ENSCGRG00001009479	Prmt2 (ENSCGRG00001010555) #34	ENSCGRG00001002616	ENSCGRG00001024447	Zfp280b (ENSCGRG00001011844)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054
Northern American deer mouse	MODERN SPECIES	13	ENSPEMG00000021662	ENSPEMG00000029694	ENSPEMG00000026871	ENSPEMG00000007691 #7	ENSPEMG00000022026	Ube2g2 (ENSPEMG00000027627) #10	ENSPEMG00000022514	ENSPEMG00000029963 ##11	Pttg1ip (ENSPEMG00000022833) #12	Itgb2 (ENSPEMG00000023793) #13	Fam207a (ENSPEMG00000029013) #17	Adarb1 (ENSPEMG00000022360) #18	Pofut2 (ENSPEMG00000021691) #19	Col18a1 (ENSPEMG00000019720) #20	Slc19a1 (ENSPEMG00000019847) #21	Pcbp3 (ENSPEMG00000000587) #22	Col6a1 (ENSPEMG00000011883) #23	Col6a2 (ENSPEMG00000023614) #24	Ftcd (ENSPEMG00000011905) #25	Spatc1l (ENSPEMG00000015524) #26	Lss (ENSPEMG00000024002) #27	Mcm3ap (ENSPEMG00000014754) #29	Ybey (ENSPEMG00000000492) #28	2610028H24Rik (ENSPEMG00000009493) #30	Pcnt (ENSPEMG00000012406) #31	Dip2a (ENSPEMG00000011906) #32	S100b (ENSPEMG00000024584) #33	Prmt2 (ENSPEMG00000016675) #34	Slc5a4a (ENSPEMG00000016494)	Slc5a4b (ENSPEMG00000018545)	Zfp280b (ENSPEMG00000023991)
Prairie vole	MODERN SPECIES	352	ENSMOCG00000004341 #7	ENSMOCG00000018107 #7	ENSMOCG00000017419 #7	ENSMOCG00000017107	ENSMOCG00000016087	Tspear (ENSMOCG00000013552) #9	Ube2g2 (ENSMOCG00000001721) #10	ENSMOCG00000021821 #11	Pttg1ip (ENSMOCG00000020270) #12	Itgb2 (ENSMOCG00000022498) #13	Fam207a (ENSMOCG00000021449) #17	Adarb1 (ENSMOCG00000018324) #18	Pofut2 (ENSMOCG00000013158) #19	Col18a1 (ENSMOCG00000019606) #20	Slc19a1 (ENSMOCG00000008838) #21	Pcbp3 (ENSMOCG00000016127) #22	Col6a1 (ENSMOCG00000015635) #23	Col6a2 (ENSMOCG00000007120) #24	Ftcd (ENSMOCG00000013801) #25	Spatc1l (ENSMOCG00000012025) #26	Lss (ENSMOCG00000020263) #27	Mcm3ap (ENSMOCG00000018380) #29	Ybey (ENSMOCG00000012634) #28	2610028H24Rik (ENSMOCG00000022971) #30	Pcnt (ENSMOCG00000006875) #31	Dip2a (ENSMOCG00000015916) #32	S100b (ENSMOCG00000020304) #33	Prmt2 (ENSMOCG00000017602) #34	Slc5a4a (ENSMOCG00000003852)	Slc5a4b (ENSMOCG00000019990)	Zfp280b (ENSMOCG00000012097)
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000155183.e	ENSGT00940000161526.b #7	ENSGT00940000155183.f	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d
Mus	ANCESTRAL SPECIES	15	ENSGT00940000154360.A.b	ENSGT00940000161526.b.r.b.b #7	ENSGT00940000155183.e.c	ENSGT00940000155183.f.a	ENSGT00940000155183.e.d.a	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00940000155183.e.c.b.a	ENSGT00940000155183.e.c.b.b.a	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00900000143399	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00900000143399	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000161526.b.r.b.a.b.a #7	ENSGT00940000161526.b.r.b.a.a #7	ENSGT00940000161526.b.r.b.a.b.b #7	ENSGT00940000161526.b.r.a #7	ENSGT00940000155183.f.b.a	ENSGT00940000158193 #10	ENSGT00950000182895.a.b.j #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a.c #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00900000143399	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054
Steppe mouse	MODERN SPECIES	2625											Adarb1 (ENSMSIG00000029150) #18	Pofut2 (ENSMSIG00000029155) #19	Col18a1 (ENSMSIG00000029164) #20	Slc19a1 (ENSMSIG00000029222) #21	ENSMSIG00000029230	Pcbp3 (ENSMSIG00000029232) #22	Col6a1 (ENSMSIG00000029284) #23	Col6a2 (ENSMSIG00000029309) #24	ENSMSIG00000029336
spretus	MODERN SPECIES	1	Gm10142 (MGP_SPRETEiJ_G0016303) #7	Gm10024 (MGP_SPRETEiJ_G0016302) #7	Gm10272 (MGP_SPRETEiJ_G0016301) #7	MGP_SPRETEiJ_G0016300	Ube2g2 (MGP_SPRETEiJ_G0016299) #10	Sumo3 (MGP_SPRETEiJ_G0016298) #11	Pttg1ip (MGP_SPRETEiJ_G0016297) #12	Itgb2 (MGP_SPRETEiJ_G0016296) #13	Fam207a (MGP_SPRETEiJ_G0016295) #17	Adarb1 (MGP_SPRETEiJ_G0016294) #18	Pofut2 (MGP_SPRETEiJ_G0016293) #19	MGP_SPRETEiJ_G0016292	Col18a1 (MGP_SPRETEiJ_G0016291) #20	Slc19a1 (MGP_SPRETEiJ_G0016290) #21	MGP_SPRETEiJ_G0016289	Pcbp3 (MGP_SPRETEiJ_G0016288) #22	Col6a1 (MGP_SPRETEiJ_G0016287) #23	Col6a2 (MGP_SPRETEiJ_G0016286) #24	Ftcd (MGP_SPRETEiJ_G0016285) #25	Spatc1l (MGP_SPRETEiJ_G0016284) #26	Lss (MGP_SPRETEiJ_G0016283) #27	Mcm3ap (MGP_SPRETEiJ_G0016282) #29	Ybey (MGP_SPRETEiJ_G0016281) #28	2610028H24Rik (MGP_SPRETEiJ_G0016280) #30	Pcnt (MGP_SPRETEiJ_G0016279) #31	MGP_SPRETEiJ_G0016278 #32	S100b (MGP_SPRETEiJ_G0016277) #33	Prmt2 (MGP_SPRETEiJ_G0016276) #34	Slc5a4a (MGP_SPRETEiJ_G0016275)	Slc5a4b (MGP_SPRETEiJ_G0016274)	Zfp280b (MGP_SPRETEiJ_G0016273)
Mouse	MODERN SPECIES	1	Gm10142 (ENSMUSG00000094146) #7	Gm10024 (ENSMUSG00000094012) #7	Gm10272 (ENSMUSG00000069584) #7	Gm9508 (ENSMUSG00000112170)	Gm19402 (ENSMUSG00000095970)	Tspear (ENSMUSG00000069581) #9	Ube2g2 (ENSMUSG00000009293) #10	Sumo3 (ENSMUSG00000020265) #11	Pttg1ip (ENSMUSG00000009291) #12	Itgb2 (ENSMUSG00000000290) #13	Fam207a (ENSMUSG00000032977) #17	Adarb1 (ENSMUSG00000020262) #18	Pofut2 (ENSMUSG00000020260) #19	Col18a1 (ENSMUSG00000001435) #20	Slc19a1 (ENSMUSG00000001436) #21	Pcbp3 (ENSMUSG00000001120) #22	Col6a1 (ENSMUSG00000001119) #23	Col6a2 (ENSMUSG00000020241) #24	Ftcd (ENSMUSG00000001155) #25	Spatc1l (ENSMUSG00000009115) #26	Lss (ENSMUSG00000033105) #27	Mcm3ap (ENSMUSG00000001150) #29	Ybey (ENSMUSG00000033126) #28	2610028H24Rik (ENSMUSG00000009114) #30	Gm56118 (ENSMUSG00000117965)	Pcnt (ENSMUSG00000001151) #31	Dip2a (ENSMUSG00000020231) #32	S100b (ENSMUSG00000033208) #33	Prmt2 (ENSMUSG00000020230) #34	Slc5a4a (ENSMUSG00000020229)	Slc5a4b (ENSMUSG00000020226)
Ryukyu mouse	MODERN SPECIES	1	Krtap12-1 (MGP_CAROLIEiJ_G0015490) #7	Gm10142 (MGP_CAROLIEiJ_G0015489) #7	Gm10024 (MGP_CAROLIEiJ_G0015488) #7	Gm10272 (MGP_CAROLIEiJ_G0015487) #7	Ube2g2 (MGP_CAROLIEiJ_G0015486) #10	Sumo3 (MGP_CAROLIEiJ_G0015485) #11	Pttg1ip (MGP_CAROLIEiJ_G0015484) #12	Itgb2 (MGP_CAROLIEiJ_G0015483) #13	Fam207a (MGP_CAROLIEiJ_G0015482) #17	Adarb1 (MGP_CAROLIEiJ_G0015481) #18	Pofut2 (MGP_CAROLIEiJ_G0015480) #19	MGP_CAROLIEiJ_G0015479	Col18a1 (MGP_CAROLIEiJ_G0015478) #20	Slc19a1 (MGP_CAROLIEiJ_G0015477) #21	MGP_CAROLIEiJ_G0015476	Pcbp3 (MGP_CAROLIEiJ_G0015475) #22	Col6a1 (MGP_CAROLIEiJ_G0015474) #23	Col6a2 (MGP_CAROLIEiJ_G0015473) #24	Ftcd (MGP_CAROLIEiJ_G0015472) #25	Spatc1l (MGP_CAROLIEiJ_G0015471) #26	Lss (MGP_CAROLIEiJ_G0015470) #27	Mcm3ap (MGP_CAROLIEiJ_G0015469) #29	Ybey (MGP_CAROLIEiJ_G0015468) #28	2610028H24Rik (MGP_CAROLIEiJ_G0015467) #30	Pcnt (MGP_CAROLIEiJ_G0015466) #31	Dip2a (MGP_CAROLIEiJ_G0015465) #32	S100b (MGP_CAROLIEiJ_G0015464) #33	Prmt2 (MGP_CAROLIEiJ_G0015463) #34	Slc5a4a (MGP_CAROLIEiJ_G0015462)	Slc5a4b (MGP_CAROLIEiJ_G0015461)	Zfp280b (MGP_CAROLIEiJ_G0015460)
Shrew mouse	MODERN SPECIES	22	Krtap12-1 (MGP_PahariEiJ_G0030904) #7	MGP_PahariEiJ_G0030903 #7	MGP_PahariEiJ_G0030902 #7	Gm10272 (MGP_PahariEiJ_G0030901) #7	MGP_PahariEiJ_G0030900	Ube2g2 (MGP_PahariEiJ_G0030899) #10	Sumo3 (MGP_PahariEiJ_G0030898) #11	Pttg1ip (MGP_PahariEiJ_G0030897) #12	Itgb2 (MGP_PahariEiJ_G0030896) #13	Fam207a (MGP_PahariEiJ_G0030895) #17	Adarb1 (MGP_PahariEiJ_G0030894) #18	Pofut2 (MGP_PahariEiJ_G0030893) #19	Col18a1 (MGP_PahariEiJ_G0030892) #20	Slc19a1 (MGP_PahariEiJ_G0030891) #21	MGP_PahariEiJ_G0030890	Pcbp3 (MGP_PahariEiJ_G0030889) #22	Col6a1 (MGP_PahariEiJ_G0030888) #23	Col6a2 (MGP_PahariEiJ_G0030887) #24	Ftcd (MGP_PahariEiJ_G0030886) #25	Spatc1l (MGP_PahariEiJ_G0030885) #26	Lss (MGP_PahariEiJ_G0030884) #27	Mcm3ap (MGP_PahariEiJ_G0030883) #29	Ybey (MGP_PahariEiJ_G0030882) #28	2610028H24Rik (MGP_PahariEiJ_G0030881) #30	Pcnt (MGP_PahariEiJ_G0030880) #31	Dip2a (MGP_PahariEiJ_G0030879) #32	S100b (MGP_PahariEiJ_G0030878) #33	Prmt2 (MGP_PahariEiJ_G0030877) #34	Slc5a4a (MGP_PahariEiJ_G0030876)	Gm5134 (MGP_PahariEiJ_G0030875)	MGP_PahariEiJ_G0030874
Rat	MODERN SPECIES	12	LOC120098855 (ENSRNOG00000042329)	LOC690415 (ENSRNOG00000069553)	LOC687631 (ENSRNOG00000047532)	LOC686720 (ENSRNOG00000032530)	LOC103694398 (ENSRNOG00000046538)	LOC690478 (ENSRNOG00000043302)	Ube2g2 (ENSRNOG00000001222) #10	Pttg1ip (ENSRNOG00000001223) #12	Itgb2 (ENSRNOG00000001224) #13	Slx9 (ENSRNOG00000001225) #17	Nme2-ps1 (ENSRNOG00000001226)	Adarb1 (ENSRNOG00000001227) #18	Pofut2 (ENSRNOG00000001228) #19	Col18a1 (ENSRNOG00000001229) #20	Slc19a1 (ENSRNOG00000001232) #21	Pcbp3 (ENSRNOG00000001245) #22	Col6a1 (ENSRNOG00000001249) #23	Col6a2 (ENSRNOG00000001254) #24	Ftcd (ENSRNOG00000001261) #25	Spatc1l (ENSRNOG00000070409) #26	Lss (ENSRNOG00000054549) #27	Mcm3ap (ENSRNOG00000001272) #29	Ybey (ENSRNOG00000021365) #28	RGD1564149 (ENSRNOG00000012714) #30	Pcnt (ENSRNOG00000001276) #31	Dip2a (ENSRNOG00000043212) #32	S100b (ENSRNOG00000001295) #33	Prmt2 (ENSRNOG00000001297) #34	Slc5a4 (ENSRNOG00000049734)	Slc5a4b (ENSRNOG00000001298)	Zfp280b (ENSRNOG00000028441)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1105				ENSNGAG00000018160	ENSNGAG00000022654 #7	ENSNGAG00000022913 #7	Ube2g2 (ENSNGAG00000002914) #10	Sumo3 (ENSNGAG00000009915) #11	Pttg1ip (ENSNGAG00000014261) #12	Itgb2 (ENSNGAG00000015702) #13	Fam207a (ENSNGAG00000020787) #17	Adarb1 (ENSNGAG00000021602) #18	Pofut2 (ENSNGAG00000016043) #19	Col18a1 (ENSNGAG00000019514) #20	ENSNGAG00000003477 #21	Pcbp3 (ENSNGAG00000005416) #22	Col6a1 (ENSNGAG00000010525) #23	Col6a2 (ENSNGAG00000013702) #24	Ftcd (ENSNGAG00000015978) #25	Spatc1l (ENSNGAG00000016890) #26	Lss (ENSNGAG00000018100) #27	Mcm3ap (ENSNGAG00000020806) #29	Ybey (ENSNGAG00000000949) #28	ENSNGAG00000001257 #30	Pcnt (ENSNGAG00000006451) #31	Dip2a (ENSNGAG00000014719) #32	S100b (ENSNGAG00000017093) #33	ENSNGAG00000017453 #34
Lesser Egyptian jerboa	MODERN SPECIES	170	Trpm2 (ENSJJAG00000022864)	Lrrc3 (ENSJJAG00000001845)	Tspear (ENSJJAG00000004036) #9	ENSJJAG00000007731	ENSJJAG00000009512	ENSJJAG00000009838	Ube2g2 (ENSJJAG00000010215) #10	Sumo3 (ENSJJAG00000011166) #11	Pttg1ip (ENSJJAG00000011874) #12	Itgb2 (ENSJJAG00000015668) #13	ENSJJAG00000016167 #17	Adarb1 (ENSJJAG00000016847) #18	Pofut2 (ENSJJAG00000017712) #19	Col18a1 (ENSJJAG00000018606) #20	Slc19a1 (ENSJJAG00000020575) #21	Pcbp3 (ENSJJAG00000021192) #22	Col6a1 (ENSJJAG00000021936) #23	Col6a2 (ENSJJAG00000023030) #24	Ftcd (ENSJJAG00000000888) #25	Spatc1l (ENSJJAG00000003377) #26	Lss (ENSJJAG00000008335) #27	Mcm3ap (ENSJJAG00000011921) #29	2610028H24Rik (ENSJJAG00000013433) #30
Atlantogenata	ANCESTRAL SPECIES	141											ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000161997.a #33	ENSGT00940000160683 #34	ENSGT00940000154486.b.a.a.b
Afrotheria	ANCESTRAL SPECIES	177											ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32
Afrotheria_a	ANCESTRAL SPECIES	179											ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000163601	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322 #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32
Hyrax	MODERN SPECIES	6236																PCBP3 (ENSPCAG00000001454) #22
Elephant	MODERN SPECIES	62											SLX9 (ENSLAFG00000010542) #17	ADARB1 (ENSLAFG00000007480) #18	POFUT2 (ENSLAFG00000011888) #19	COL18A1 (ENSLAFG00000017396) #20	SLC19A1 (ENSLAFG00000018599) #21	PCBP3 (ENSLAFG00000020835) #22	ENSLAFG00000010458	COL6A2 (ENSLAFG00000001954) #24	FTCD (ENSLAFG00000030714) #25	LSS (ENSLAFG00000003317) #27	ENSLAFG00000025926 #29	ENSLAFG00000003323 #29	YBEY (ENSLAFG00000031106) #28	ENSLAFG00000025881 #30	PCNT (ENSLAFG00000017965) #31	DIP2A (ENSLAFG00000017975) #32
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Armadillo	MODERN SPECIES	2449																PCBP3 (ENSDNOG00000049518) #22
Marsupialia	ANCESTRAL SPECIES	31	ENSGT00510000047718 #9	ENSGT00960000188864	ENSGT00940000163441	ENSGT00940000163258 #8	ENSGT00940000158193 #10	ENSGT00950000182895.a.b #11	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322.h #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000160683 #34	ENSGT00940000161997.a #33	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000154360.A.b	ENSGT00510000047718 #9	ENSGT00960000188864	ENSGT00940000163441	ENSGT00940000163258 #8	ENSGT00940000158193 #10	ENSGT00390000004977 #12	ENSGT01090000259987.a.a.a #13	ENSGT00390000015709 #17	ENSGT00940000155992 #18	ENSGT00390000007989 #19	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #22	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00520000055666.b #26	ENSGT00390000011570 #27	ENSGT00940000156322.h #29	ENSGT00950000183170.b.b #28	ENSGT00390000011514 #30	ENSGT00730000110871.a.a.a.b #31	ENSGT00950000182997.a.b.b.a #32	ENSGT00940000160683 #34	ENSGT00940000161997.a #33	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Wallaby	MODERN SPECIES	8956																PCBP3 (ENSMEUG00000012960) #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000030442	ENSSHAG00000027145	ENSSHAG00000021961	ENSSHAG00000026876	ENSSHAG00000024983 #7	ENSSHAG00000026518	ENSSHAG00000004908	ENSSHAG00000029287	ENSSHAG00000001385 #9	ENSSHAG00000027202 #12	ENSSHAG00000021176	ITGB2 (ENSSHAG00000026803) #13	ADARB1 (ENSSHAG00000031177) #18	POFUT2 (ENSSHAG00000005611) #19	COL18A1 (ENSSHAG00000000750) #20	PCBP3 (ENSSHAG00000007890) #22	COL6A1 (ENSSHAG00000008873) #23	ENSSHAG00000028129 #24	FTCD (ENSSHAG00000003460) #25	SPATC1L (ENSSHAG00000003976) #26	LSS (ENSSHAG00000004524) #27	ENSSHAG00000005045 #29	ENSSHAG00000023584 #30	ENSSHAG00000006209 #31	ENSSHAG00000007437 #32	ENSSHAG00000025431 #34	ENSSHAG00000025078 #33	ENSSHAG00000004807	ENSSHAG00000003180	ENSSHAG00000000317	UGT1A1 (ENSSHAG00000001438)
Sauria	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Archelosauria	ANCESTRAL SPECIES	57													ENSGT00940000167200	ENSGT00940000158212.B #20	ENSGT00950000183022.b #21	ENSGT00940000162185 #22	ENSGT00940000162768.B	ENSGT00950000183546	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000162889 #23	ENSGT00940000155682 #24	ENSGT00390000005581.a #25	ENSGT00390000011570 #27	ENSGT00940000161997.a #33	ENSGT01030000235951	ENSGT00950000182997.a.b.b.a #32	ENSGT00730000110871.a.a.a.b #31	ENSGT00390000011514 #30	ENSGT00390000000747	ENSGT01090000259987.a.a.a #13
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Aves	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Neognathae	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Passeriformes	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Great tit	MODERN SPECIES	27					USP40 (ENSPMJG00000006193)	TRAF3IP1 (ENSPMJG00000006215)	ASB1 (ENSPMJG00000006219)	ENSPMJG00000006222	TWIST2 (ENSPMJG00000006223)	HDAC4 (ENSPMJG00000006236)	NDUFA10 (ENSPMJG00000006274)	ENSPMJG00000006291	ENSPMJG00000006297	COL18A1 (ENSPMJG00000006305) #20	SLC19A1 (ENSPMJG00000006343) #21	PCBP3 (ENSPMJG00000006345) #22	ENSPMJG00000006352	COL6A2 (ENSPMJG00000006389) #24	FTCD (ENSPMJG00000006430) #25	ENSPMJG00000006435	MCM3AP (ENSPMJG00000006438) #29	YBEY (ENSPMJG00000006440) #28	ENSPMJG00000006441 #19	ENSPMJG00000006442	UGT1A1 (ENSPMJG00000006443)	SH3BP4 (ENSPMJG00000006446)	ARL4C (ENSPMJG00000006522)	SPP2 (ENSPMJG00000006527)	ENSPMJG00000006532	TRPM8 (ENSPMJG00000006537)	AGAP1 (ENSPMJG00000006600)
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000162185 #22
Clupeocephala	ANCESTRAL SPECIES	138														ENSGT01100000263515.a.b.a.b.b.k.a	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00990000214327	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747
Otomorpha	ANCESTRAL SPECIES	482														ENSGT01100000263515.a.b.a.b.b.k.a	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552
Clupeiformes	ANCESTRAL SPECIES	8														ENSGT01100000263515.a.b.a.b.b.k.a	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00990000214327	ENSGT00940000161907	ENSGT00950000182936.a.b.a	ENSGT00940000158288	ENSGT00390000004068	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b
Denticle herring	MODERN SPECIES	18	CAPN15 (ENSDCDG00000035342)	ENSDCDG00000035346	slc6a16b (ENSDCDG00000035350)	SLC17A7 (ENSDCDG00000003229)	CHRM3 (ENSDCDG00000004035)	ENSDCDG00000004038	GREM2 (ENSDCDG00000004039)	rgs7a (ENSDCDG00000004075)	kif11 (ENSDCDG00000004413)	slc22a15 (ENSDCDG00000004423)	cyp26c1 (ENSDCDG00000004425)	reep3a (ENSDCDG00000004427)	ENSDCDG00000004434	ENSDCDG00000004450	MOCOS (ENSDCDG00000004466)	zgc:110045 (ENSDCDG00000004490) #22	vwc2 (ENSDCDG00000004492)	ENSDCDG00000004494	ikzf1 (ENSDCDG00000004507)	ENSDCDG00000004649	ttl (ENSDCDG00000004654)	fhip2a (ENSDCDG00000004665)	PLPP4 (ENSDCDG00000004726)	wdr11 (ENSDCDG00000004743)	si:ch211-198a12.6 (ENSDCDG00000004751)	stox1 (ENSDCDG00000004754)	ccar1 (ENSDCDG00000004758)	zgc:110319 (ENSDCDG00000004784)	si:dkey-228d14.5 (ENSDCDG00000004790)	eif4e1c (ENSDCDG00000004795)	ENSDCDG00000004802
Atlantic herring	MODERN SPECIES	4	MYPN (ENSCHAG00000017715)	CACUL1 (ENSCHAG00000017883)	ENSCHAG00000017897	MTLN (ENSCHAG00000018035)	ENSCHAG00000018044	ENSCHAG00000018151	ENSCHAG00000018221	ENSCHAG00000018245	ENSCHAG00000018438	ENSCHAG00000018461	ENSCHAG00000018493	ENSCHAG00000018617	ENSCHAG00000018650	ENSCHAG00000018659	MOCOS (ENSCHAG00000018708)	zgc:110045 (ENSCHAG00000019196) #22	vwc2 (ENSCHAG00000019241)	SPATA48 (ENSCHAG00000019249)	ikzf1 (ENSCHAG00000019263)	fignl1 (ENSCHAG00000019351)	ttl (ENSCHAG00000019358)	fhip2a (ENSCHAG00000019387)	ENSCHAG00000019831	PLPP4 (ENSCHAG00000019861)	wdr11 (ENSCHAG00000019878)	si:ch211-198a12.6 (ENSCHAG00000019945)	stox1 (ENSCHAG00000019950)	ccar1 (ENSCHAG00000019967)	zgc:110319 (ENSCHAG00000020522)	si:dkey-228d14.5 (ENSCHAG00000020527)	eif4e1c (ENSCHAG00000020559)
Otophysi	ANCESTRAL SPECIES	29	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00950000184268	ENSGT00940000154935.d	ENSGT00940000155303.l	ENSGT00940000156914.o.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00940000155555	ENSGT00940000169764	ENSGT00390000008212	ENSGT00940000158888	ENSGT00940000154239.a
Characiphysae	ANCESTRAL SPECIES	13	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d	ENSGT00940000155303.l	ENSGT00940000156914.o.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00940000155555	ENSGT00390000008212	ENSGT00940000158888	ENSGT00940000154239.a	ENSGT00950000182772.A.a.b.`b.a	ENSGT00940000154862.x.b	ENSGT00390000016478.c.b	ENSGT01030000234613.b.a.a.c.a	ENSGT01030000234613.b.a.b.g
Channel catfish	MODERN SPECIES	22	zfand4 (ENSIPUG00000004728)	marchf8 (ENSIPUG00000004619)	ENSIPUG00000004606	ENSIPUG00000004596	ckba (ENSIPUG00000004569)	vdac2 (ENSIPUG00000004553)	ENSIPUG00000004549	ifit8 (ENSIPUG00000004546)	comtd1 (ENSIPUG00000004535)	znf503 (ENSIPUG00000004515)	CJ011 (ENSIPUG00000004493)	kcnma1a (ENSIPUG00000004383)	dlg5 (ENSIPUG00000004020)	anxa11a (ENSIPUG00000003965)	mocos (ENSIPUG00000003946)	zgc:110045 (ENSIPUG00000003932) #22	ENSIPUG00000003914	vwc2 (ENSIPUG00000003893)	c3h7orf72 (ENSIPUG00000003880)	ikzf1 (ENSIPUG00000003841)	fignl1 (ENSIPUG00000003825)	ttl (ENSIPUG00000003796)	klc1 (ENSIPUG00000003683)	apopt1 (ENSIPUG00000003665)	bag5 (ENSIPUG00000003641)	trmt61a (ENSIPUG00000003613)	ckba (ENSIPUG00000003503)	mark3 (ENSIPUG00000003398)	eif5 (ENSIPUG00000003331)	ENSIPUG00000003305	exoc3l4 (ENSIPUG00000003285)
Characiphysae_b	ANCESTRAL SPECIES	10	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d	ENSGT00940000155303.l	ENSGT00940000156914.o.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00940000155555	ENSGT00390000008212	ENSGT00940000158888	ENSGT00940000154239.a	ENSGT00950000182772.A.a.b.`b.a	ENSGT00940000154862.x.b	ENSGT00390000016478.c.b	ENSGT01030000234613.b.a.a.c.a	ENSGT01030000234613.b.a.b.g
Characoidei	ANCESTRAL SPECIES	5	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d	ENSGT00940000155303.l	ENSGT00940000156914.o.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00940000155555	ENSGT00390000008212	ENSGT00940000158888	ENSGT00940000154239.a	ENSGT00950000182772.A.a.b.`b.a	ENSGT00940000154862.x.b	ENSGT00390000016478.c.b	ENSGT01030000234613.b.a.a.c.a	ENSGT01030000234613.b.a.b.g
Red-bellied piranha	MODERN SPECIES	10	alox5a (ENSPNAG00000027136)	ENSPNAG00000006862	zfand4 (ENSPNAG00000007097)	marchf8 (ENSPNAG00000027410)	vdac2 (ENSPNAG00000005273)	ENSPNAG00000027469	ifit8 (ENSPNAG00000027476)	comtd1 (ENSPNAG00000027732)	znf503 (ENSPNAG00000027759)	lrmda (ENSPNAG00000004261)	kcnma1a (ENSPNAG00000027930)	ENSPNAG00000027955	dlg5a (ENSPNAG00000028221)	anxa11a (ENSPNAG00000028657)	MOCOS (ENSPNAG00000028740)	zgc:110045 (ENSPNAG00000004501) #22	ENSPNAG00000006838	vwc2 (ENSPNAG00000029192)	SPATA48 (ENSPNAG00000004535)	ikzf1 (ENSPNAG00000004566)	fignl1 (ENSPNAG00000029349)	ttl (ENSPNAG00000005397)	klc1a (ENSPNAG00000004610)	coa8 (ENSPNAG00000004611)	bag5 (ENSPNAG00000029483)	trmt61a (ENSPNAG00000029500)	ckba (ENSPNAG00000004654)	mark3a (ENSPNAG00000029687)	EIF5 (ENSPNAG00000029712)	ENSPNAG00000029768	exoc3l4 (ENSPNAG00000004678)
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000157520	ENSGT00940000156111.d	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT00940000153289.a.a.a	ENSGT00950000184268	ENSGT00940000154935.d	ENSGT00940000155303.l	ENSGT00940000156914.o.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00940000155555.b	ENSGT00940000169764	ENSGT00390000008212	ENSGT00940000158888	ENSGT00940000154239.a	ENSGT01030000234848	ENSGT00950000182772.A.a.b.`b.a	ENSGT00940000154862.x.b
Zebrafish	MODERN SPECIES	4	slc25a16 (ENSDARG00000057287)	alox5a (ENSDARG00000057273)	ENSDARG00000062532	zfand4 (ENSDARG00000076703)	ENSDARG00000110724	marchf8 (ENSDARG00000062489)	vdac2 (ENSDARG00000013623)	ENSDARG00000003146	ifit8 (ENSDARG00000057173)	comtd1 (ENSDARG00000078918)	znf503 (ENSDARG00000018492)	lrmda (ENSDARG00000057166)	kcnma1a (ENSDARG00000079840)	dlg5a (ENSDARG00000074059)	anxa11a (ENSDARG00000077383)	zgc:110045 (ENSDARG00000057141) #22	ENSDARG00000110961	vwc2 (ENSDARG00000076495)	SPATA48 (ENSDARG00000109818)	ikzf1 (ENSDARG00000013539)	fignl1 (ENSDARG00000016427)	ttl (ENSDARG00000062418)	ENSDARG00000093131	klc1a (ENSDARG00000009796)	coa8 (ENSDARG00000092473)	bag5 (ENSDARG00000017316)	trmt61a (ENSDARG00000008480)	ENSDARG00000111126	ckba (ENSDARG00000069752)	mark3a (ENSDARG00000019345)	loxl3b (ENSDARG00000039563)
Cyprininae	ANCESTRAL SPECIES	87	ENSGT00940000153997.b.b.b	ENSGT00940000155716.r	ENSGT00940000158282.d.a.b	ENSGT00950000182869.e.a.a.q.d.a	ENSGT00940000161685.A.b.b	ENSGT00950000182946.lb.b.e.a	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b.b	ENSGT00940000153289.a.a.a.b	ENSGT00940000154935.d.c.b	ENSGT00950000184268	ENSGT00940000154935.d.c.a	ENSGT00940000155303.l.a	ENSGT00940000165077	ENSGT00940000157051.c	ENSGT00940000162185 #22	ENSGT00720000108792.A.f	ENSGT00940000156782.c.f	ENSGT00940000161552.d	ENSGT00940000161907.d	ENSGT00940000155555.b.b	ENSGT00940000169764	ENSGT00390000008212.i	ENSGT00940000158888.o	ENSGT00940000154239.a.e.a	ENSGT01030000234613.b.a.a.c.a.b	ENSGT01030000234613.b.a.b.g.a	ENSGT01030000234613.b.a.b.h	ENSGT00940000154239.a.e.b	ENSGT00950000182772.A.a.b.`b.a.n	ENSGT01100000266056
Cyprininae_a	ANCESTRAL SPECIES	32	ENSGT00940000153997.b.b.b	ENSGT00940000155716.r	ENSGT00940000158282.d.a.b	ENSGT00950000182869.e.a.a.q.d.a	ENSGT00940000161685.A.b.a	ENSGT00950000182946.lb.b.e.a	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b.b	ENSGT01020000230338.a.b.b.a.a.a.b.a.b.a.a.d.b.a	ENSGT00940000153289.a.a.a.b	ENSGT00940000154935.d.c.b	ENSGT00940000154935.d.c.a	ENSGT00940000155303.l.a	ENSGT00940000165077	ENSGT00940000157051.c	ENSGT00940000162185 #22	ENSGT00720000108792.A.f	ENSGT00940000156782.c.f	ENSGT00940000161552.d	ENSGT00940000161907.d	ENSGT00940000155555.b.b	ENSGT00390000008212.i	ENSGT00940000158888.o	ENSGT00940000154239.a.e.a
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	44	alox5a (ENSSGRG00000047929)	ENSSGRG00000047927	zfand4 (ENSSGRG00000047926)	marchf8 (ENSSGRG00000047925)	vdac2 (ENSSGRG00000045875)	ENSSGRG00000045819	ifit8 (ENSSGRG00000045818)	comtd1 (ENSSGRG00000045817)	znf503 (ENSSGRG00000045816)	ENSSGRG00000045814	lrmda (ENSSGRG00000045813)	kcnma1a (ENSSGRG00000043159)	dlg5a (ENSSGRG00000043037)	ENSSGRG00000041822	MOCOS (ENSSGRG00000041645)	zgc:110045 (ENSSGRG00000041643) #22	vwc2 (ENSSGRG00000041642)	ikzf1 (ENSSGRG00000041641)	fignl1 (ENSSGRG00000041640)	ttl (ENSSGRG00000041639)	klc1a (ENSSGRG00000041636)	coa8 (ENSSGRG00000041635)	bag5 (ENSSGRG00000041632)	trmt61a (ENSSGRG00000041629)	ENSSGRG00000041627	ckba (ENSSGRG00000040901)	mark3a (ENSSGRG00000040691)	ENSSGRG00000040476	ENSSGRG00000040471	exoc3l4 (ENSSGRG00000040470)	ENSSGRG00000040463
Golden-line barbel	MODERN SPECIES	3433																ENSSGRG00000003439 #22
Euteleosteomorpha	ANCESTRAL SPECIES	33	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Protacanthopterygii	ANCESTRAL SPECIES	39	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	307	ENSGT00940000155525.f	ENSGT00940000158658.c	ENSGT00940000176198	ENSGT00390000008787.b.f	ENSGT00390000008978.db	ENSGT00940000158482.e	ENSGT00940000157425.B.c	ENSGT00730000111063.c	ENSGT00940000164222.c	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.f	ENSGT00940000155493.m	ENSGT00940000165086.b.l	ENSGT01100000263515.a.b.a.b.b.k.a.b	ENSGT00940000157051.f	ENSGT00940000162185.c #22	ENSGT00720000108792.A.c.b	ENSGT00940000162844	ENSGT00940000156782.c.c	ENSGT00940000161552.e	ENSGT00940000161907.a	ENSGT01030000236031
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000155525.f	ENSGT00940000158658.c	ENSGT00940000176198	ENSGT00390000008787.b.f	ENSGT00390000008978.db	ENSGT00940000158482.e	ENSGT00940000157425.B.c	ENSGT00730000111063.c	ENSGT00940000164222.c	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.f	ENSGT00940000155493.m	ENSGT00940000165086.b.l	ENSGT01100000263515.a.b.a.b.b.k.a.b	ENSGT00940000157051.f	ENSGT00940000162185.c #22	ENSGT00720000108792.A.c.b	ENSGT00940000162844	ENSGT00940000156782.c.c	ENSGT00940000161552.e	ENSGT00940000161907.a	ENSGT01030000236031	ENSGT00390000003094	ENSGT00950000183037.B.a.o	ENSGT00950000182992.a.b.a.a.a	ENSGT00940000157736.t	ENSGT01100000263502.A.a.b.l	ENSGT00390000000747.n	ENSGT00940000155780.h	ENSGT00390000009948.c.f	ENSGT00940000158949.e
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000163077.f	ENSGT00940000155525.f	ENSGT00940000158658.c	ENSGT00390000008787.b.f	ENSGT00390000008978.db	ENSGT00940000158482.e	ENSGT00940000157425.B.c	ENSGT00730000111063.c	ENSGT00940000164222.c	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.f	ENSGT00940000155493.m	ENSGT00940000165086.b.l	ENSGT01100000263515.a.b.a.b.b.k.a.b	ENSGT00940000157051.f	ENSGT00940000162185.c #22	ENSGT00720000108792.A.c.b	ENSGT00940000162844	ENSGT00940000156782.c.c	ENSGT00940000161552.e	ENSGT00940000161907.a	ENSGT01030000236031	ENSGT00390000003094	ENSGT00950000183037.B.a.o	ENSGT00950000182992.a.b.a.a.a	ENSGT00940000157736.t	ENSGT01100000263502.A.a.b.l	ENSGT00390000000747.n	ENSGT00940000155780.h	ENSGT00390000009948.c.f	ENSGT00940000158949.e
River trout	MODERN SPECIES	9	neurog3 (ENSSTUG00000005003)	pdlim1 (ENSSTUG00000005015)	ENSSTUG00000005092	ENSSTUG00000005245	ENSSTUG00000005266	RAB11FIP2 (ENSSTUG00000005274)	emx2 (ENSSTUG00000005282)	eif3s10 (ENSSTUG00000005360)	dennd10 (ENSSTUG00000007388)	sfxn4 (ENSSTUG00000007408)	prdx3 (ENSSTUG00000007420)	tm9sf3 (ENSSTUG00000007464)	ENSSTUG00000007523	MOCOS (ENSSTUG00000007573)	ENSSTUG00000007624	zgc:110045 (ENSSTUG00000007635) #22	vwc2 (ENSSTUG00000007652)	SPATA48 (ENSSTUG00000007662)	ikzf1 (ENSSTUG00000007682)	fignl1 (ENSSTUG00000007953)	ttl (ENSSTUG00000007958)	nanp (ENSSTUG00000007979)	cyp1b1 (ENSSTUG00000007983)	ENSSTUG00000007996	cdc42ep3 (ENSSTUG00000008031)	opn3 (ENSSTUG00000008035)	kmo (ENSSTUG00000008056)	ide (ENSSTUG00000008606)	marchf5 (ENSSTUG00000008753)	cpeb3 (ENSSTUG00000008786)	BTAF1 (ENSSTUG00000008964)
Atlantic salmon	MODERN SPECIES		ENSSSAG00000006922	ENSSSAG00000006986	fam204a (ENSSSAG00000006993)	rab11fip2 (ENSSSAG00000007000)	ENSSSAG00000095718	emx2 (ENSSSAG00000007004)	eif3s10 (ENSSSAG00000007047)	ENSSSAG00000094938	dennd10 (ENSSSAG00000007951)	sfxn4 (ENSSSAG00000007961)	PRDX3 (ENSSSAG00000007976)	tm9sf3 (ENSSSAG00000008049)	ENSSSAG00000053156	ENSSSAG00000008210	ENSSSAG00000008280	zgc:110045 (ENSSSAG00000008314) #22	vwc2 (ENSSSAG00000008379)	SPATA48 (ENSSSAG00000008381)	ikzf1 (ENSSSAG00000008390)	fignl1 (ENSSSAG00000008559)	ttl (ENSSSAG00000096737)	ENSSSAG00000008577	nanp (ENSSSAG00000084980)	cyp1b1 (ENSSSAG00000115170)	ENSSSAG00000008595	cdc42ep3 (ENSSSAG00000087269)	ENSSSAG00000084460	opn3 (ENSSSAG00000008619)	kmo (ENSSSAG00000008648)	ide (ENSSSAG00000008849)	marchf5 (ENSSSAG00000014067)
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000155525.f	ENSGT00940000158658.c	ENSGT00940000176198	ENSGT00390000008787.b.f	ENSGT00390000008978.db	ENSGT00940000158482.e	ENSGT00940000157425.B.c	ENSGT00730000111063.c	ENSGT00940000164222.c	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.f	ENSGT00940000155493.m	ENSGT00940000165086.b.l	ENSGT01100000263515.a.b.a.b.b.k.a.b	ENSGT00940000157051.f	ENSGT00940000162185.c #22	ENSGT00720000108792.A.c.b	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c.c	ENSGT00940000161552.e	ENSGT00940000161907.a	ENSGT01030000236031	ENSGT00390000003094	ENSGT00950000183037.B.a.o	ENSGT00950000182992.a.b.a.a.a	ENSGT00940000157736.t	ENSGT01100000263502.A.a.b.l	ENSGT00390000000747.n	ENSGT00940000155780.h	ENSGT00390000009948.c.f
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000044192	ENSOMYG00000077884	ENSOMYG00000044197	fam204a (ENSOMYG00000054669)	ENSOMYG00000044202	emx2 (ENSOMYG00000044204)	eif3s10 (ENSOMYG00000044248)	dennd10 (ENSOMYG00000044767)	sfxn4 (ENSOMYG00000044778)	prdx3 (ENSOMYG00000044795)	tm9sf3 (ENSOMYG00000044819)	ENSOMYG00000070145	ENSOMYG00000044924	ENSOMYG00000044912	ENSOMYG00000065832	zgc:110045 (ENSOMYG00000044960) #22	vwc2 (ENSOMYG00000044970)	ENSOMYG00000044982	ENSOMYG00000073036	ENSOMYG00000055349	ikzf1 (ENSOMYG00000044996)	fignl1 (ENSOMYG00000045107)	ttl (ENSOMYG00000045112)	nanp (ENSOMYG00000077849)	cyp1b1 (ENSOMYG00000045123)	ENSOMYG00000045126	cdc42ep3 (ENSOMYG00000045132)	opn3 (ENSOMYG00000045133)	kmo (ENSOMYG00000045143)	ENSOMYG00000055482	ide (ENSOMYG00000045287)
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000155525.f	ENSGT00940000158658.c	ENSGT00940000176198	ENSGT00390000008787.b.f	ENSGT00390000008978.db	ENSGT00940000158482.e	ENSGT00940000157425.B.c	ENSGT00730000111063.c	ENSGT00940000164222.c	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.f	ENSGT00940000155493.m	ENSGT00940000165086.b.l	ENSGT01100000263515.a.b.a.b.b.k.a.b	ENSGT00940000157051.f	ENSGT00940000162185.c #22	ENSGT00720000108792.A.c.b	ENSGT00940000162844	ENSGT00940000156782.c.c	ENSGT00940000161552.e	ENSGT00940000161907.a	ENSGT01030000236031	ENSGT00390000003094	ENSGT00950000183037.B.a.o	ENSGT00950000182992.a.b.a.a.a	ENSGT00940000157736.t	ENSGT01100000263502.A.a.b.l	ENSGT00390000000747.n	ENSGT00940000155780.h	ENSGT00390000009948.c.f	ENSGT00940000158949.e
Coho salmon	MODERN SPECIES	2	neurog3 (ENSOKIG00005021719)	pdlim1 (ENSOKIG00005016721)	ENSOKIG00005016714	ENSOKIG00005016704	fam204a (ENSOKIG00005016668)	RAB11FIP2 (ENSOKIG00005016660)	emx2 (ENSOKIG00005016649)	eif3s10 (ENSOKIG00005016289)	dennd10 (ENSOKIG00005016234)	sfxn4 (ENSOKIG00005016216)	prdx3 (ENSOKIG00005016178)	tm9sf3 (ENSOKIG00005016025)	ENSOKIG00005015930	ENSOKIG00005015915	MOCOS (ENSOKIG00005015830)	zgc:110045 (ENSOKIG00005015792) #22	vwc2 (ENSOKIG00005015778)	SPATA48 (ENSOKIG00005015762)	ikzf1 (ENSOKIG00005015493)	fignl1 (ENSOKIG00005015470)	ttl (ENSOKIG00005015448)	ENSOKIG00005015435	nanp (ENSOKIG00005015432)	cyp1b1 (ENSOKIG00005015422)	ENSOKIG00005015405	cdc42ep3 (ENSOKIG00005015398)	ENSOKIG00005015395	opn3 (ENSOKIG00005015387)	kmo (ENSOKIG00005015340)	ide (ENSOKIG00005014604)	marchf5 (ENSOKIG00005014405)
Chinook salmon	MODERN SPECIES		neurog3 (ENSOTSG00005006561)	ENSOTSG00005006562	ENSOTSG00005006568	ENSOTSG00005006570	fam204a (ENSOTSG00005006572)	RAB11FIP2 (ENSOTSG00005006574)	emx2 (ENSOTSG00005006575)	eif3s10 (ENSOTSG00005006585)	dennd10 (ENSOTSG00005008921)	sfxn4 (ENSOTSG00005008922)	prdx3 (ENSOTSG00005008923)	tm9sf3 (ENSOTSG00005009018)	ENSOTSG00005010136	ENSOTSG00005010139	MOCOS (ENSOTSG00005010140)	zgc:110045 (ENSOTSG00005010141) #22	vwc2 (ENSOTSG00005010143)	ikzf1 (ENSOTSG00005010144)	fignl1 (ENSOTSG00005010405)	ttl (ENSOTSG00005010406)	ENSOTSG00005010407	nanp (ENSOTSG00005010408)	cyp1b1 (ENSOTSG00005010409)	ENSOTSG00005010410	ENSOTSG00005010411	cdc42ep3 (ENSOTSG00005010412)	opn3 (ENSOTSG00005010413)	kmo (ENSOTSG00005010414)	ide (ENSOTSG00005010418)	marchf5 (ENSOTSG00005013483)	cpeb3 (ENSOTSG00005013517)
Huchen	MODERN SPECIES	979							eif3s10 (ENSHHUG00000034940)	dennd10 (ENSHHUG00000035173)	ENSHHUG00000035186	sfxn4 (ENSHHUG00000035190)	prdx3 (ENSHHUG00000035198)	tm9sf3 (ENSHHUG00000035216)	ENSHHUG00000035245	ENSHHUG00000035268	MOCOS (ENSHHUG00000035292)	zgc:110045 (ENSHHUG00000035331) #22	vwc2 (ENSHHUG00000035346)	SPATA48 (ENSHHUG00000035350)	ikzf1 (ENSHHUG00000035360)	fignl1 (ENSHHUG00000035419)	ttl (ENSHHUG00000035422)	polr1b (ENSHHUG00000035432)	nanp (ENSHHUG00000035471)	cyp1b1 (ENSHHUG00000035473)	ENSHHUG00000035476
Salmoninae	ANCESTRAL SPECIES	259	ENSGT00390000007221.a.b.u	ENSGT00390000000046.i	ENSGT00940000163077.e	ENSGT00940000155525.e	ENSGT00940000158658.d	ENSGT00390000008787.b.e	ENSGT00390000008978.eb	ENSGT00940000158482.f	ENSGT00940000157425.B.d	ENSGT00730000111063.d	ENSGT00940000164222.d	ENSGT00940000153430.a.b.e	ENSGT00940000155493.n	ENSGT00940000165086.b.k	ENSGT00940000157051.e	ENSGT00940000162185.d #22	ENSGT00720000108792.A.d
Huchen	MODERN SPECIES	121	si:dkey-192p21.6 (ENSHHUG00000032704)	pcbd1 (ENSHHUG00000032713)	sgpl1 (ENSHHUG00000032724)	neurog3 (ENSHHUG00000032753)	ENSHHUG00000032754	ENSHHUG00000032828	fam204a (ENSHHUG00000032839)	ENSHHUG00000032842	emx2 (ENSHHUG00000032843)	eif3s10 (ENSHHUG00000032853)	dennd10 (ENSHHUG00000032912)	prdx3 (ENSHHUG00000032914)	tm9sf3 (ENSHHUG00000032996)	ENSHHUG00000033125	MOCOS (ENSHHUG00000033169)	ENSHHUG00000033231 #22	vwc2 (ENSHHUG00000033243)
Salmoninae_a	ANCESTRAL SPECIES	71	ENSGT00390000007221.a.b.u	ENSGT00390000000046.i	ENSGT00940000163077.e	ENSGT00940000155525.e	ENSGT00940000158658.d	ENSGT00390000008787.b.e	ENSGT00390000008978.eb	ENSGT00940000158482.f	ENSGT00940000157425.B.d	ENSGT00730000111063.d	ENSGT00940000164222.d	ENSGT00940000153430.a.b.e	ENSGT00940000155493.n	ENSGT00940000165086.b.k	ENSGT00940000157051.e	ENSGT00940000162185.d #22	ENSGT00720000108792.A.d	ENSGT00940000156782.c.d	ENSGT00940000161552.f	ENSGT00940000161907.b	ENSGT00950000183132.B	ENSGT00950000183037.B.a.p	ENSGT00950000182992.a.b.a.a.b	ENSGT00940000157736.s	ENSGT01100000263502.A.a.b.k	ENSGT00390000000747.m	ENSGT00940000155780.g	ENSGT00390000009948.c.e	ENSGT00940000158949.f	ENSGT00940000157500.e	ENSGT00940000156590.qb
Salmo	ANCESTRAL SPECIES	29	ENSGT00390000007221.a.b.u	ENSGT00390000000046.i	ENSGT00940000163077.e	ENSGT00940000155525.e	ENSGT00940000158658.d	ENSGT00390000008787.b.e	ENSGT00390000008978.eb	ENSGT00940000158482.f	ENSGT00940000157425.B.d	ENSGT00730000111063.d	ENSGT00940000164222.d	ENSGT00940000153430.a.b.e	ENSGT00940000155493.n	ENSGT00940000165086.b.k	ENSGT00940000157051.e	ENSGT00940000162185.d #22	ENSGT00720000108792.A.d	ENSGT00940000156782.c.d	ENSGT00940000161552.f	ENSGT00940000161907.b	ENSGT00950000183132.B	ENSGT00950000183037.B.a.p	ENSGT00950000182992.a.b.a.a.b	ENSGT00940000157736.s	ENSGT01100000263502.A.a.b.k	ENSGT00390000000747.m	ENSGT00940000155780.g	ENSGT00390000009948.c.e	ENSGT00940000158949.f	ENSGT00940000157500.e	ENSGT00940000156590.qb
Atlantic salmon	MODERN SPECIES	9	pcbd1 (ENSSSAG00000048001)	sgpl1 (ENSSSAG00000048086)	neurog3 (ENSSSAG00000091461)	pdlim1 (ENSSSAG00000052063)	ENSSSAG00000052116	ENSSSAG00000052282	CJ084 (ENSSSAG00000052297)	ENSSSAG00000052308	emx2 (ENSSSAG00000102331)	eif3a (ENSSSAG00000052342)	dennd10 (ENSSSAG00000052484)	prdx3 (ENSSSAG00000052515)	tm9sf3 (ENSSSAG00000052858)	ENSSSAG00000112293	ENSSSAG00000053193	zgc:110045 (ENSSSAG00000053224) #22	vwc2 (ENSSSAG00000053298)	ikzf1 (ENSSSAG00000053329)	fignl1 (ENSSSAG00000053731)	ttl (ENSSSAG00000053746)	polr1b (ENSSSAG00000053769)	cyp1b1 (ENSSSAG00000053814)	ENSSSAG00000053821	cdc42ep3 (ENSSSAG00000090820)	opn3 (ENSSSAG00000053835)	kmo (ENSSSAG00000053843)	ide (ENSSSAG00000053985)	marchf5 (ENSSSAG00000056762)	cpeb3 (ENSSSAG00000056801)	BTAF1 (ENSSSAG00000057145)	ENSSSAG00000096692
River trout	MODERN SPECIES	35	pcbd1 (ENSSTUG00000014415)	sgpl1 (ENSSTUG00000013071)	neurog3 (ENSSTUG00000013004)	pdlim1 (ENSSTUG00000012985)	ENSSTUG00000012976	ENSSTUG00000012954	fam204a (ENSSTUG00000012934)	ENSSTUG00000012918	emx2 (ENSSTUG00000012909)	eif3s10 (ENSSTUG00000010537)	dennd10 (ENSSTUG00000010436)	prdx3 (ENSSTUG00000010225)	tm9sf3 (ENSSTUG00000009130)	ENSSTUG00000009002	MOCOS (ENSSTUG00000008824)	zgc:110045 (ENSSTUG00000008769) #22	vwc2 (ENSSTUG00000008765)	ikzf1 (ENSSTUG00000008514)	ttl (ENSSTUG00000008449)	polr1b (ENSSTUG00000008406)	cyp1b1 (ENSSTUG00000008398)	ENSSTUG00000008390	cdc42ep3 (ENSSTUG00000008387)	opn3 (ENSSTUG00000008364)	kmo (ENSSTUG00000008286)	ide (ENSSTUG00000007896)	marchf5 (ENSSTUG00000007796)	cpeb3 (ENSSTUG00000007732)	BTAF1 (ENSSTUG00000003038)	ENSSTUG00000002818	CCNJ (ENSSTUG00000002803)
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000163077.e	ENSGT00940000155525.e	ENSGT00940000158658.d	ENSGT00970000193381.a.a.c.b.a.a.a.b	ENSGT00390000008787.b.e	ENSGT00390000008978.eb	ENSGT00940000158482.f	ENSGT00940000157425.B.d	ENSGT00730000111063.d	ENSGT00940000164222.d	ENSGT00940000153430.a.b.e	ENSGT00940000155493.n	ENSGT00940000165086.b.k	ENSGT00940000157051.e	ENSGT00390000008457.d.b	ENSGT00940000162185.d #22	ENSGT00720000108792.A.d	ENSGT00940000156782.c.d	ENSGT00940000161552.f	ENSGT00940000161907.b	ENSGT00950000183132.B.j	ENSGT00950000183037.B.a.p	ENSGT00950000182992.a.b.a.a.b	ENSGT00940000157736.s	ENSGT01100000263502.A.a.b.k	ENSGT00390000000747.m	ENSGT00940000155780.g	ENSGT00390000009948.c.e	ENSGT00940000158949.f	ENSGT00940000157500.e	ENSGT00940000156981
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000163077.e	ENSGT00940000155525.e	ENSGT00940000158658.d	ENSGT00970000193381.a.a.c.b.a.a.a.b	ENSGT00390000008787.b.e	ENSGT00390000008978.eb	ENSGT00940000158482.f	ENSGT00940000157425.B.d	ENSGT00730000111063.d	ENSGT00940000164222.d	ENSGT00940000153430.a.b.e	ENSGT00940000155493.n	ENSGT00940000165086.b.k	ENSGT00940000157051.e	ENSGT00390000008457.d.b	ENSGT00940000162185.d #22	ENSGT00720000108792.A.d	ENSGT00940000156782.c.d	ENSGT00940000161552.f	ENSGT00940000161907.b	ENSGT00950000183132.B.j	ENSGT00950000183037.B.a.p	ENSGT00950000182992.a.b.a.a.b	ENSGT00940000157736.s	ENSGT01100000263502.A.a.b.k	ENSGT00390000000747.m	ENSGT00940000155780.g	ENSGT00390000009948.c.e	ENSGT00940000158949.f	ENSGT00940000157500.e	ENSGT00940000156981
Chinook salmon	MODERN SPECIES	30	pdlim1 (ENSOTSG00005043081)	ENSOTSG00005043083	ENSOTSG00005043084	ENSOTSG00005043086	fam204a (ENSOTSG00005043088)	ENSOTSG00005043089	ENSOTSG00005043090	emx2 (ENSOTSG00005043092)	eif3s10 (ENSOTSG00005043102)	dennd10 (ENSOTSG00005043174)	prdx3 (ENSOTSG00005043176)	tm9sf3 (ENSOTSG00005043202)	ENSOTSG00005043952	MOCOS (ENSOTSG00005043956)	cdc26 (ENSOTSG00005043960)	zgc:110045 (ENSOTSG00005043961) #22	vwc2 (ENSOTSG00005043962)	ikzf1 (ENSOTSG00005043964)	fignl1 (ENSOTSG00005044039)	ttl (ENSOTSG00005044040)	polr1b (ENSOTSG00005044043)	cyp1b1 (ENSOTSG00005044045)	ENSOTSG00005044046	cdc42ep3 (ENSOTSG00005044047)	opn3 (ENSOTSG00005044048)	kmo (ENSOTSG00005044050)	ide (ENSOTSG00005044060)	marchf5 (ENSOTSG00005044644)	cpeb3 (ENSOTSG00005044646)	BTAF1 (ENSOTSG00005044677)	CCNJ (ENSOTSG00005044822)
Coho salmon	MODERN SPECIES	24	sgpl1 (ENSOKIG00005004045)	neurog3 (ENSOKIG00005005348)	pdlim1 (ENSOKIG00005005356)	ENSOKIG00005005361	ENSOKIG00005005375	fam204a (ENSOKIG00005005383)	ENSOKIG00005005396	emx2 (ENSOKIG00005005402)	eif3s10 (ENSOKIG00005005436)	dennd10 (ENSOKIG00005005606)	prdx3 (ENSOKIG00005005630)	tm9sf3 (ENSOKIG00005005977)	ENSOKIG00005007301	MOCOS (ENSOKIG00005007359)	cdc26 (ENSOKIG00005007436)	zgc:110045 (ENSOKIG00005007446) #22	vwc2 (ENSOKIG00005007468)	ikzf1 (ENSOKIG00005007494)	ENSOKIG00005007711	ttl (ENSOKIG00005007720)	polr1b (ENSOKIG00005007736)	cyp1b1 (ENSOKIG00005007761)	ENSOKIG00005007780	cdc42ep3 (ENSOKIG00005007795)	opn3 (ENSOKIG00005007801)	kmo (ENSOKIG00005007831)	ide (ENSOKIG00005007953)	marchf5 (ENSOKIG00005008211)	cpeb3 (ENSOKIG00005008299)	BTAF1 (ENSOKIG00005008535)	CCNJ (ENSOKIG00005009635)
Rainbow trout	MODERN SPECIES		neurog3 (ENSOMYG00000051762)	pdlim1 (ENSOMYG00000030714)	ENSOMYG00000039351	ENSOMYG00000068111	ENSOMYG00000030903	fam204a (ENSOMYG00000030921)	ENSOMYG00000030938	emx2 (ENSOMYG00000030942)	eif3s10 (ENSOMYG00000031028)	dennd10 (ENSOMYG00000031064)	prdx3 (ENSOMYG00000031080)	tm9sf3 (ENSOMYG00000015203)	si:ch211-117n7.7 (ENSOMYG00000015276)	ENSOMYG00000015330	ENSOMYG00000064272	zgc:110045 (ENSOMYG00000015384) #22	vwc2 (ENSOMYG00000015399)	ikzf1 (ENSOMYG00000015446)	ENSOMYG00000015776	ttl (ENSOMYG00000015780)	polr1b (ENSOMYG00000015804)	cyp1b1 (ENSOMYG00000015863)	ENSOMYG00000015876	ENSOMYG00000015884	cdc42ep3 (ENSOMYG00000015888)	opn3 (ENSOMYG00000015891)	kmo (ENSOMYG00000015932)	ide (ENSOMYG00000016279)	march5b (ENSOMYG00000016515)	cpeb3 (ENSOMYG00000016580)	BTAF1 (ENSOMYG00000017095)
Northern pike	MODERN SPECIES	5	neurog3 (ENSELUG00000020507)	pdlim1 (ENSELUG00000020494)	ENSELUG00000001214	ENSELUG00000020467	ENSELUG00000020327	fam204a (ENSELUG00000020311)	ENSELUG00000020239	emx2 (ENSELUG00000020231)	eif3s10 (ENSELUG00000020201)	dennd10 (ENSELUG00000020177)	sfxn4 (ENSELUG00000020128)	prdx3 (ENSELUG00000000881)	tm9sf3 (ENSELUG00000019970)	si:ch211-117n7.7 (ENSELUG00000019869)	MOCOS (ENSELUG00000019797)	zgc:110045 (ENSELUG00000019784) #22	vwc2 (ENSELUG00000019741)	ikzf1 (ENSELUG00000019717)	fignl1 (ENSELUG00000030624)	ttl (ENSELUG00000019652)	polr1b (ENSELUG00000019627)	nanp (ENSELUG00000019586)	cyp1b1 (ENSELUG00000019569)	ENSELUG00000019534	cdc42ep3 (ENSELUG00000019460)	ENSELUG00000030007	ENSELUG00000027891	opn3 (ENSELUG00000024961)	opn3 (ENSELUG00000029530)	opn3 (ENSELUG00000000841)	kmo (ENSELUG00000019438)
Acanthomorphata	ANCESTRAL SPECIES	45	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Cod	MODERN SPECIES	6	csgalnact2 (ENSGMOG00000005443)	ret (ENSGMOG00000005386)	si:dkey-192p21.6 (ENSGMOG00000005331)	pcbd1 (ENSGMOG00000025589)	ENSGMOG00000027100	ENSGMOG00000006202	fam204a (ENSGMOG00000006195)	ENSGMOG00000031570	eif3s10 (ENSGMOG00000006124)	dennd10 (ENSGMOG00000006109)	sfxn4 (ENSGMOG00000006079)	prdx3 (ENSGMOG00000006068)	tm9sf3 (ENSGMOG00000006049)	si:ch211-117n7.7 (ENSGMOG00000031760)	ENSGMOG00000005979	zgc:110045 (ENSGMOG00000005953) #22	vwc2 (ENSGMOG00000027868)	ikzf1 (ENSGMOG00000005918)	fignl1 (ENSGMOG00000029024)	ttl (ENSGMOG00000005880)	polr1b (ENSGMOG00000005847)	ENSGMOG00000027466	nanp (ENSGMOG00000005831)	cyp1b1 (ENSGMOG00000006842)	ENSGMOG00000005663	ENSGMOG00000023403	ENSGMOG00000027915	ENSGMOG00000022618	ENSGMOG00000023859	ENSGMOG00000032783	ENSGMOG00000023276
Euacanthomorphacea	ANCESTRAL SPECIES	32	ENSGT00940000176198	ENSGT00940000158658	ENSGT00900000142007	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Pinecone sodierfish	MODERN SPECIES	6	neurog3 (ENSMMDG00005011712)	pdlim1 (ENSMMDG00005011716)	ENSMMDG00005011723	ENSMMDG00005011726	PIK3AP1 (ENSMMDG00005011733)	fam204a (ENSMMDG00005011942)	RAB11FIP2 (ENSMMDG00005011948)	emx2 (ENSMMDG00005011949)	eif3s10 (ENSMMDG00005011982)	dennd10 (ENSMMDG00005014397)	sfxn4 (ENSMMDG00005014408)	prdx3 (ENSMMDG00005014464)	tm9sf3 (ENSMMDG00005014626)	si:ch211-117n7.7 (ENSMMDG00005016211)	MOCOS (ENSMMDG00005016217)	zgc:110045 (ENSMMDG00005016225) #22	vwc2 (ENSMMDG00005016229)	ENSMMDG00005016232	ikzf1 (ENSMMDG00005016243)	fignl1 (ENSMMDG00005016483)	ttl (ENSMMDG00005016486)	polr1b (ENSMMDG00005016502)	nanp (ENSMMDG00005016582)	cyp1b1 (ENSMMDG00005016602)	ENSMMDG00005016825	cdc42ep3 (ENSMMDG00005016828)	opn3 (ENSMMDG00005016831)	kmo (ENSMMDG00005016841)	ide (ENSMMDG00005016882)	marchf5 (ENSMMDG00005017709)	cpeb3 (ENSMMDG00005017732)
Percomorphaceae	ANCESTRAL SPECIES	30	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Tiger tail seahorse	MODERN SPECIES	312	neurog3 (ENSHCOG00000004972)	pdlim1 (ENSHCOG00000004978)	ENSHCOG00000004989	ENSHCOG00000005027	ENSHCOG00000005107	fam204a (ENSHCOG00000005123)	RAB11FIP2 (ENSHCOG00000005129)	emx2 (ENSHCOG00000005139)	eif3s10 (ENSHCOG00000005197)	dennd10 (ENSHCOG00000000667)	sfxn4 (ENSHCOG00000005280)	prdx3 (ENSHCOG00000005301)	tm9sf3 (ENSHCOG00000005322)	si:ch211-117n7.7 (ENSHCOG00000005332)	MOCOS (ENSHCOG00000005351)	zgc:110045 (ENSHCOG00000000818) #22	vwc2 (ENSHCOG00000005459)	ENSHCOG00000000603	ikzf1 (ENSHCOG00000005494)	fignl1 (ENSHCOG00000005506)	ttl (ENSHCOG00000005533)	nanp (ENSHCOG00000005547)	cyp1b1 (ENSHCOG00000005556)	ENSHCOG00000005575	cdc42ep3 (ENSHCOG00000005581)	opn3 (ENSHCOG00000005612)	kmo (ENSHCOG00000005657)	ide (ENSHCOG00000005681)	ENSHCOG00000005693	marchf5 (ENSHCOG00000005713)	cpeb3 (ENSHCOG00000005747)
Percomorphaceae_B	ANCESTRAL SPECIES	24	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000155525	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907
Fugu	MODERN SPECIES	16	sgpl1 (ENSTRUG00000017861)	pcbd1 (ENSTRUG00000017869)	neurog3 (ENSTRUG00000020179)	pdlim1 (ENSTRUG00000017854)	ENSTRUG00000017850	ENSTRUG00000022215	ENSTRUG00000017840	fam204a (ENSTRUG00000031021)	RAB11FIP2 (ENSTRUG00000024416)	emx2 (ENSTRUG00000024123)	eif3s10 (ENSTRUG00000017823)	dennd10 (ENSTRUG00000017814)	tm9sf3 (ENSTRUG00000022400)	si:ch211-117n7.7 (ENSTRUG00000017800)	MOCOS (ENSTRUG00000017797)	zgc:110045 (ENSTRUG00000017789) #22	vwc2 (ENSTRUG00000017788)	ikzf1 (ENSTRUG00000020773)	fignl1 (ENSTRUG00000017776)	ttl (ENSTRUG00000017772)	ENSTRUG00000024247	ENSTRUG00000019701	cox5b2 (ENSTRUG00000029494)	HERC4 (ENSTRUG00000017737)	ENSTRUG00000023629	ENSTRUG00000024578	lrrfip2 (ENSTRUG00000017714)	dact2 (ENSTRUG00000021341)	SMOC2 (ENSTRUG00000017700)	eif3s6ip (ENSTRUG00000017695)	vsir (ENSTRUG00000032041)
Tetraodon	MODERN SPECIES	9	pdlim1 (ENSTNIG00000013083)	ENSTNIG00000013082	ENSTNIG00000013081	RAB11FIP2 (ENSTNIG00000005714)	gnrhr1 (ENSTNIG00000004999)	meox2b (ENSTNIG00000005000)	tmem106bb (ENSTNIG00000005001)	thsd7aa (ENSTNIG00000006219)	nxph1 (ENSTNIG00000006218)	emx2 (ENSTNIG00000002977)	eif3s10 (ENSTNIG00000002976)	phf14 (ENSTNIG00000002975)	prdx3 (ENSTNIG00000019627)	tm9sf3 (ENSTNIG00000003548)	MOCOS (ENSTNIG00000003547)	zgc:110045 (ENSTNIG00000003546) #22
Eupecaria_A	ANCESTRAL SPECIES	26	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Ballan wrasse	MODERN SPECIES	251	pcbd1 (ENSLBEG00000023764)	sgpl1 (ENSLBEG00000023716)	neurog3 (ENSLBEG00000023686)	pdlim1 (ENSLBEG00000023660)	ENSLBEG00000023552	ENSLBEG00000023477	fam204a (ENSLBEG00000023457)	RAB11FIP2 (ENSLBEG00000023437)	emx2 (ENSLBEG00000023421)	eif3s10 (ENSLBEG00000023394)	dennd10 (ENSLBEG00000023353)	sfxn4 (ENSLBEG00000023320)	prdx3 (ENSLBEG00000023267)	tm9sf3 (ENSLBEG00000023217)	MOCOS (ENSLBEG00000023165)	zgc:110045 (ENSLBEG00000023074) #22	vwc2 (ENSLBEG00000023043)	ikzf1 (ENSLBEG00000023024)	fignl1 (ENSLBEG00000023009)	ttl (ENSLBEG00000022981)	ENSLBEG00000022960	EML4 (ENSLBEG00000022841)	tspan14 (ENSLBEG00000022753)	ENSLBEG00000022740	KCNG3 (ENSLBEG00000022725)	QKI (ENSLBEG00000022702)	prkn (ENSLBEG00000022622)	ENSLBEG00000022556	UBR2 (ENSLBEG00000022453)	prph2b (ENSLBEG00000022386)	ENSLBEG00000022330
Eupecaria_B	ANCESTRAL SPECIES	26	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Eupecaria_C	ANCESTRAL SPECIES	28	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000011010.a.b	ENSGT00940000158924	ENSGT00940000158284	ENSGT00940000159342.b	ENSGT00800000124177	ENSGT00530000063564.a	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00390000000411	ENSGT00940000163216
Gilthead seabream	MODERN SPECIES	6	sgpl1 (ENSSAUG00010021710)	neurog3 (ENSSAUG00010021706)	pdlim1 (ENSSAUG00010021705)	ENSSAUG00010021701	ENSSAUG00010021699	fam204a (ENSSAUG00010021697)	RAB11FIP2 (ENSSAUG00010021696)	emx2 (ENSSAUG00010021695)	eif3s10 (ENSSAUG00010021686)	dennd10 (ENSSAUG00010021677)	sfxn4 (ENSSAUG00010021670)	PRDX3 (ENSSAUG00010021664)	tm9sf3 (ENSSAUG00010021568)	si:ch211-117n7.7 (ENSSAUG00010021556)	MOCOS (ENSSAUG00010021527)	zgc:110045 (ENSSAUG00010021518) #22	vwc2 (ENSSAUG00010021515)	ENSSAUG00010021514	ikzf1 (ENSSAUG00010021495)	fignl1 (ENSSAUG00010021493)	ttl (ENSSAUG00010021491)	COX5b1 (ENSSAUG00010021488)	HERC4 (ENSSAUG00010021383)	ENSSAUG00010021379	ENSSAUG00010021378	mlh1 (ENSSAUG00010021341)	lrrfip2 (ENSSAUG00010021116)	dact2 (ENSSAUG00010021093)	SMOC2 (ENSSAUG00010021084)	vsir (ENSSAUG00010021077)	ENSSAUG00010021076
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	32	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000011010.a.b	ENSGT00940000158924	ENSGT00940000158284	ENSGT00940000159342.b	ENSGT00800000124177	ENSGT00530000063564.a	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00390000000411	ENSGT00940000163216
European seabass	MODERN SPECIES	1	sgpl1 (ENSDLAG00005007270)	ENSDLAG00005008253	pdlim1 (ENSDLAG00005008259)	ENSDLAG00005008269	ENSDLAG00005008287	fam204a (ENSDLAG00005031567)	ENSDLAG00005008323	emx2 (ENSDLAG00005034417)	eif3s10 (ENSDLAG00005008367)	dennd10 (ENSDLAG00005008498)	sfxn4 (ENSDLAG00005008530)	prdx3 (ENSDLAG00005008566)	tm9sf3 (ENSDLAG00005008617)	si:ch211-117n7.7 (ENSDLAG00005009430)	ENSDLAG00005009440	zgc:110045 (ENSDLAG00005009609) #22	vwc2 (ENSDLAG00005009628)	ikzf1 (ENSDLAG00005029019)	fignl1 (ENSDLAG00005034773)	ttl (ENSDLAG00005009752)	ENSDLAG00005009783	ENSDLAG00005009832	ENSDLAG00005030057	ENSDLAG00005010085	ENSDLAG00005010097	mlh1 (ENSDLAG00005010104)	lrrfip2 (ENSDLAG00005010250)	dact2 (ENSDLAG00005010609)	ENSDLAG00005010618	eif3s6ip (ENSDLAG00005010701)	cdh23 (ENSDLAG00005010877)
Large yellow croaker	MODERN SPECIES	53	sgpl1 (ENSLCRG00005020256)	neurog3 (ENSLCRG00005020252)	pdlim1 (ENSLCRG00005020249)	SORBS1 (ENSLCRG00005020215)	ENSLCRG00005020209	fam204a (ENSLCRG00005020207)	RAB11FIP2 (ENSLCRG00005020206)	emx2 (ENSLCRG00005020204)	eif3s10 (ENSLCRG00005020196)	dennd10 (ENSLCRG00005020193)	sfxn4 (ENSLCRG00005020188)	prdx3 (ENSLCRG00005020184)	tm9sf3 (ENSLCRG00005020183)	si:ch211-117n7.7 (ENSLCRG00005020181)	MOCOS (ENSLCRG00005020179)	zgc:110045 (ENSLCRG00005020178) #22	vwc2 (ENSLCRG00005020177)	ENSLCRG00005020174	ikzf1 (ENSLCRG00005020169)	fignl1 (ENSLCRG00005020168)	ttl (ENSLCRG00005020167)
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Cottioidei	ANCESTRAL SPECIES	36	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00900000142007	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Stickleback	MODERN SPECIES	6	pcbd1 (ENSGACG00000003259)	sgpl1 (ENSGACG00000003253)	pdlim1 (ENSGACG00000003243)	SORBS1 (ENSGACG00000003233)	ENSGACG00000003216	fam204a (ENSGACG00000003212)	RAB11FIP2 (ENSGACG00000003208)	emx2 (ENSGACG00000003199)	eif3s10 (ENSGACG00000003191)	dennd10 (ENSGACG00000003174)	sfxn4 (ENSGACG00000003163)	prdx3 (ENSGACG00000003133)	tm9sf3 (ENSGACG00000003087)	si:ch211-117n7.7 (ENSGACG00000003077)	MOCOS (ENSGACG00000003055)	zgc:110045 (ENSGACG00000003044) #22	vwc2 (ENSGACG00000003041)	ikzf1 (ENSGACG00000003033)	fignl1 (ENSGACG00000003032)	ttl (ENSGACG00000003026)	ENSGACG00000003023	ENSGACG00000003019	polr1b (ENSGACG00000003012)	nanp (ENSGACG00000003009)	cyp1b1 (ENSGACG00000003007)	ENSGACG00000003000	cdc42ep3 (ENSGACG00000002988)	opn3 (ENSGACG00000002981)	kmo (ENSGACG00000002962)	ide (ENSGACG00000002953)	marchf5 (ENSGACG00000002949)
Lumpfish	MODERN SPECIES	6	neurog3 (ENSCLMG00005007993)	pdlim1 (ENSCLMG00005007996)	SORBS1 (ENSCLMG00005008000)	ENSCLMG00005008003	PIK3AP1 (ENSCLMG00005008004)	fam204a (ENSCLMG00005008007)	RAB11FIP2 (ENSCLMG00005008008)	emx2 (ENSCLMG00005008009)	eif3s10 (ENSCLMG00005008010)	dennd10 (ENSCLMG00005008018)	sfxn4 (ENSCLMG00005008019)	prdx3 (ENSCLMG00005008023)	tm9sf3 (ENSCLMG00005008031)	si:ch211-117n7.7 (ENSCLMG00005008046)	MOCOS (ENSCLMG00005008050)	zgc:110045 (ENSCLMG00005008053) #22	vwc2 (ENSCLMG00005008056)	ENSCLMG00005008063	ikzf1 (ENSCLMG00005008068)	ttl (ENSCLMG00005008150)	degs1 (ENSCLMG00005008151)	nvl (ENSCLMG00005008153)	ENSCLMG00005008157	tk2 (ENSCLMG00005008159)	ENSCLMG00005008162	aprt (ENSCLMG00005008163)	CDT1 (ENSCLMG00005008165)	PIEZO1 (ENSCLMG00005008197)	tm9sf2 (ENSCLMG00005012711)	pcca (ENSCLMG00005014399)	ENSCLMG00005018189
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907
Pike perch	MODERN SPECIES	62	ENSSLUG00000002417	pdlim1 (ENSSLUG00000002422)	ENSSLUG00000002453	ENSSLUG00000002535	ENSSLUG00000002546	fam204a (ENSSLUG00000002564)	RAB11FIP2 (ENSSLUG00000002568)	emx2 (ENSSLUG00000002572)	eif3s10 (ENSSLUG00000002603)	dennd10 (ENSSLUG00000002651)	sfxn4 (ENSSLUG00000002655)	prdx3 (ENSSLUG00000002671)	tm9sf3 (ENSSLUG00000002739)	si:ch211-117n7.7 (ENSSLUG00000002884)	MOCOS (ENSSLUG00000002934)	zgc:110045 (ENSSLUG00000002981) #22	vwc2 (ENSSLUG00000003071)	ENSSLUG00000003128	ikzf1 (ENSSLUG00000003171)	fignl1 (ENSSLUG00000003392)	ttl (ENSSLUG00000003402)	ENSSLUG00000003414	inaa (ENSSLUG00000003433)	pcgf6 (ENSSLUG00000003502)	ENSSLUG00000003514	XPO1 (ENSSLUG00000003545)	SANBR (ENSSLUG00000003658)	pex13 (ENSSLUG00000003700)	REL (ENSSLUG00000003714)	papolg (ENSSLUG00000003953)	haao (ENSSLUG00000006811)
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	6	pcbd1 (ENSCGOG00000009151)	neurog3 (ENSCGOG00000009182)	pdlim1 (ENSCGOG00000009193)	ENSCGOG00000009215	ENSCGOG00000009289	fam204a (ENSCGOG00000009294)	RAB11FIP2 (ENSCGOG00000009297)	emx2 (ENSCGOG00000009300)	eif3s10 (ENSCGOG00000009320)	dennd10 (ENSCGOG00000010125)	sfxn4 (ENSCGOG00000010134)	prdx3 (ENSCGOG00000010139)	tm9sf3 (ENSCGOG00000010151)	si:ch211-117n7.7 (ENSCGOG00000010372)	MOCOS (ENSCGOG00000010377)	zgc:110045 (ENSCGOG00000010396) #22	vwc2 (ENSCGOG00000010403)	ENSCGOG00000010404	ikzf1 (ENSCGOG00000010414)	fignl1 (ENSCGOG00000010491)	ttl (ENSCGOG00000010526)	b3gat2 (ENSCGOG00000010539)	ENSCGOG00000010551	ENSCGOG00000010576	ENSCGOG00000010628	mlh1 (ENSCGOG00000010656)	lrrfip2 (ENSCGOG00000011075)	ENSCGOG00000012390	SMOC2 (ENSCGOG00000012391)	cdh23 (ENSCGOG00000012416)	vsir (ENSCGOG00000012720)
Channel bull blenny	MODERN SPECIES	11	ENSCGOG00000020468	abi2b (ENSCGOG00000020352)	cyp20a1 (ENSCGOG00000019942)	tmem237b (ENSCGOG00000019929)	MPP4 (ENSCGOG00000019924)	ALS2 (ENSCGOG00000019865)	CHRNA2 (ENSCGOG00000019821)	zgc:113142 (ENSCGOG00000019818)	inpp4ab (ENSCGOG00000018278)	ENSCGOG00000018232	ENSCGOG00000017369	ENSCGOG00000017339	nr4a2b (ENSCGOG00000017337)	gpd2 (ENSCGOG00000016825)	ENSCGOG00000016794	PCBP3 (ENSCGOG00000016792) #22	LRRC3 (ENSCGOG00000016789)	ATP7B (ENSCGOG00000014706)	eed (ENSCGOG00000014468)	pwp2h (ENSCGOG00000014224)	ENSCGOG00000014216	ENSCGOG00000014139	ENSCGOG00000014080	zswim2 (ENSCGOG00000014072)	FAM171B (ENSCGOG00000014069)	n6amt1 (ENSCGOG00000014068)	ENSCGOG00000014061	mrps9 (ENSCGOG00000013936)	pou3f3b (ENSCGOG00000013930)	ENSCGOG00000013928	actr3 (ENSCGOG00000013242)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000155525	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00900000142007	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Zig-zag eel	MODERN SPECIES	6	neurog3 (ENSMAMG00000028087)	pdlim1 (ENSMAMG00000013929)	ENSMAMG00000013987	ENSMAMG00000014025	ENSMAMG00000014048	fam204a (ENSMAMG00000027806)	ENSMAMG00000014084	emx2 (ENSMAMG00000014095)	eif3s10 (ENSMAMG00000014137)	dennd10 (ENSMAMG00000014210)	sfxn4 (ENSMAMG00000014262)	prdx3 (ENSMAMG00000014292)	tm9sf3 (ENSMAMG00000028440)	si:ch211-117n7.7 (ENSMAMG00000014340)	ENSMAMG00000014354	zgc:110045 (ENSMAMG00000014389) #22	vwc2 (ENSMAMG00000026396)	ENSMAMG00000014425	ikzf1 (ENSMAMG00000027086)	fignl1 (ENSMAMG00000014483)	ttl (ENSMAMG00000014493)	ENSMAMG00000014549	ENSMAMG00000015319	ENSMAMG00000015405	ENSMAMG00000015417	mlh1 (ENSMAMG00000015440)	lrrfip2 (ENSMAMG00000015529)	dact2 (ENSMAMG00000015634)	ENSMAMG00000015675	eif3s6ip (ENSMAMG00000015713)	cdh23 (ENSMAMG00000015750)
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000163077	ENSGT00940000155525	ENSGT00900000142007	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Siamese fighting fish	MODERN SPECIES	6	pcbd1 (ENSBSLG00000008469)	sgpl1 (ENSBSLG00000008547)	ENSBSLG00000008800	pdlim1 (ENSBSLG00000008804)	ENSBSLG00000008836	ENSBSLG00000008893	fam204a (ENSBSLG00000009000)	RAB11FIP2 (ENSBSLG00000009037)	emx2 (ENSBSLG00000009061)	eif3s10 (ENSBSLG00000009109)	dennd10 (ENSBSLG00000009922)	sfxn4 (ENSBSLG00000009936)	prdx3 (ENSBSLG00000010001)	tm9sf3 (ENSBSLG00000010059)	si:ch211-117n7.7 (ENSBSLG00000010289)	zgc:110045 (ENSBSLG00000010328) #22	vwc2 (ENSBSLG00000010334)	ENSBSLG00000010575	ikzf1 (ENSBSLG00000010675)	fignl1 (ENSBSLG00000010853)	ttl (ENSBSLG00000010860)	cox5b2 (ENSBSLG00000010901)	HERC4 (ENSBSLG00000010915)	ENSBSLG00000010943	ENSBSLG00000010965	mlh1 (ENSBSLG00000010981)	lrrfip2 (ENSBSLG00000011140)	dact2 (ENSBSLG00000011354)	SMOC2 (ENSBSLG00000011674)	eif3s6ip (ENSBSLG00000011905)	vsir (ENSBSLG00000012217)
Climbing perch	MODERN SPECIES	6	neurog3 (ENSATEG00000011737)	pdlim1 (ENSATEG00000011713)	ENSATEG00000011679	ENSATEG00000011627	ENSATEG00000011576	fam204a (ENSATEG00000011567)	ENSATEG00000011555	emx2 (ENSATEG00000011381)	eif3s10 (ENSATEG00000011354)	dennd10 (ENSATEG00000026994)	sfxn4 (ENSATEG00000011299)	prdx3 (ENSATEG00000028795)	tm9sf3 (ENSATEG00000011231)	si:ch211-117n7.7 (ENSATEG00000011219)	ENSATEG00000011211	zgc:110045 (ENSATEG00000011191) #22	vwc2 (ENSATEG00000011180)	ENSATEG00000011148	ikzf1 (ENSATEG00000011105)	fignl1 (ENSATEG00000011087)	ttl (ENSATEG00000011034)	polr1b (ENSATEG00000010957)	nanp (ENSATEG00000010941)	cyp1b1 (ENSATEG00000010933)	ENSATEG00000029165	cdc42ep3 (ENSATEG00000010904)	opn3 (ENSATEG00000010893)	kmo (ENSATEG00000010827)	ide (ENSATEG00000010722)	ENSATEG00000025422	marchf5 (ENSATEG00000010690)
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Carangaria_A	ANCESTRAL SPECIES	31	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949
Seriola	ANCESTRAL SPECIES	14	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500
Greater amberjack	MODERN SPECIES	30	neurog3 (ENSSDUG00000018883)	pdlim1 (ENSSDUG00000018897)	ENSSDUG00000018930	ENSSDUG00000019025	ENSSDUG00000019035	fam204a (ENSSDUG00000019089)	RAB11FIP2 (ENSSDUG00000019098)	emx2 (ENSSDUG00000019125)	eif3s10 (ENSSDUG00000019140)	dennd10 (ENSSDUG00000019220)	sfxn4 (ENSSDUG00000019244)	prdx3 (ENSSDUG00000019255)	tm9sf3 (ENSSDUG00000019276)	si:ch211-117n7.7 (ENSSDUG00000019323)	MOCOS (ENSSDUG00000019347)	zgc:110045 (ENSSDUG00000019371) #22	vwc2 (ENSSDUG00000019382)	ikzf1 (ENSSDUG00000019397)	fignl1 (ENSSDUG00000019441)	ttl (ENSSDUG00000019448)	polr1b (ENSSDUG00000019471)	nanp (ENSSDUG00000019522)	cyp1b1 (ENSSDUG00000019527)	ENSSDUG00000019535	cdc42ep3 (ENSSDUG00000019571)	opn3 (ENSSDUG00000019575)	kmo (ENSSDUG00000019590)	ide (ENSSDUG00000019622)	marchf5 (ENSSDUG00000019714)	cpeb3 (ENSSDUG00000019766)	BTAF1 (ENSSDUG00000019837)
Yellowtail amberjack	MODERN SPECIES	3109	neurog3 (ENSSLDG00000020510)	pdlim1 (ENSSLDG00000020522)	ENSSLDG00000020563	ENSSLDG00000020744	ENSSLDG00000020764	fam204a (ENSSLDG00000020805)	RAB11FIP2 (ENSSLDG00000020841)	emx2 (ENSSLDG00000020855)	eif3s10 (ENSSLDG00000020888)	dennd10 (ENSSLDG00000020907)	sfxn4 (ENSSLDG00000020933)	prdx3 (ENSSLDG00000020952)	tm9sf3 (ENSSLDG00000020980)	si:ch211-117n7.7 (ENSSLDG00000021013)	MOCOS (ENSSLDG00000021034)	zgc:110045 (ENSSLDG00000021064) #22	vwc2 (ENSSLDG00000021109)	ikzf1 (ENSSLDG00000021122)	fignl1 (ENSSLDG00000021151)	ttl (ENSSLDG00000021154)	ENSSLDG00000021164	nanp (ENSSLDG00000021180)	cyp1b1 (ENSSLDG00000021191)	ENSSLDG00000021205	cdc42ep3 (ENSSLDG00000021250)	opn3 (ENSSLDG00000021258)	kmo (ENSSLDG00000021276)	ide (ENSSLDG00000021337)	marchf5 (ENSSLDG00000021414)	cpeb3 (ENSSLDG00000021438)	BTAF1 (ENSSLDG00000021505)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	206	sgpl1 (ENSLCAG00010008367)	neurog3 (ENSLCAG00010008522)	pdlim1 (ENSLCAG00010008527)	ENSLCAG00010008534	ENSLCAG00010008540	fam204a (ENSLCAG00010008541)	RAB11FIP2 (ENSLCAG00010008543)	emx2 (ENSLCAG00010008545)	eif3s10 (ENSLCAG00010008579)	dennd10 (ENSLCAG00010008741)	sfxn4 (ENSLCAG00010008745)	prdx3 (ENSLCAG00010008761)	tm9sf3 (ENSLCAG00010008806)	si:ch211-117n7.7 (ENSLCAG00010008860)	MOCOS (ENSLCAG00010008888)	zgc:110045 (ENSLCAG00010008908) #22	vwc2 (ENSLCAG00010008913)	ENSLCAG00010008917	ikzf1 (ENSLCAG00010008924)	fignl1 (ENSLCAG00010008936)	ttl (ENSLCAG00010008939)	polr1b (ENSLCAG00010008949)	nanp (ENSLCAG00010008955)	cyp1b1 (ENSLCAG00010008957)	ENSLCAG00010008958	cdc42ep3 (ENSLCAG00010008960)	opn3 (ENSLCAG00010008962)	kmo (ENSLCAG00010008973)	ide (ENSLCAG00010009006)	marchf5 (ENSLCAG00010009101)	cpeb3 (ENSLCAG00010009119)
Barramundi perch	MODERN SPECIES	1142																ENSLCAG00010013960 #22
Pleuronectoidei	ANCESTRAL SPECIES	28	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500
Turbot	MODERN SPECIES	6	pcbd1 (ENSSMAG00000024076)	sgpl1 (ENSSMAG00000013040)	neurog3 (ENSSMAG00000013097)	pdlim1 (ENSSMAG00000013116)	ENSSMAG00000013146	ENSSMAG00000013274	fam204a (ENSSMAG00000013322)	ENSSMAG00000013336	emx2 (ENSSMAG00000013356)	eif3s10 (ENSSMAG00000013380)	dennd10 (ENSSMAG00000013438)	sfxn4 (ENSSMAG00000024831)	prdx3 (ENSSMAG00000013488)	tm9sf3 (ENSSMAG00000013465)	ENSSMAG00000013516	zgc:110045 (ENSSMAG00000013541) #22	vwc2 (ENSSMAG00000013603)	ikzf1 (ENSSMAG00000013618)	fignl1 (ENSSMAG00000013671)	ttl (ENSSMAG00000013675)	polr1b (ENSSMAG00000013682)	nanp (ENSSMAG00000013716)	cyp1b1 (ENSSMAG00000013726)	ENSSMAG00000013735	cdc42ep3 (ENSSMAG00000013759)	opn3 (ENSSMAG00000013763)	kmo (ENSSMAG00000013784)	ide (ENSSMAG00000013822)	marchf5 (ENSSMAG00000013888)	cpeb3 (ENSSMAG00000013924)	BTAF1 (ENSSMAG00000014035)
Tongue sole	MODERN SPECIES	3	PWWP2B (ENSCSEG00000010521)	INPP5A (ENSCSEG00000010496)	nkx6.2 (ENSCSEG00000010490)	valopa (ENSCSEG00000010484)	ENSCSEG00000010456	ENSCSEG00000010432	ADGRA1 (ENSCSEG00000010321)	KNDC1 (ENSCSEG00000010219)	ENSCSEG00000010212	vox (ENSCSEG00000010208)	dennd10 (ENSCSEG00000010175)	sfxn4 (ENSCSEG00000010159)	prdx3 (ENSCSEG00000010149)	tm9sf3 (ENSCSEG00000010093)	si:ch211-117n7.7 (ENSCSEG00000010068)	zgc:110045 (ENSCSEG00000010020) #22	MOCOS (ENSCSEG00000009978)	vwc2 (ENSCSEG00000009963)	ikzf1 (ENSCSEG00000008620)	fignl1 (ENSCSEG00000008604)	ttl (ENSCSEG00000008600)	polr1b (ENSCSEG00000008564)	nanp (ENSCSEG00000008595)	cyp1b1 (ENSCSEG00000008557)	ENSCSEG00000008531	cdc42ep3 (ENSCSEG00000008521)	opn3 (ENSCSEG00000008514)	kmo (ENSCSEG00000008503)	ide (ENSCSEG00000008456)	marchf5 (ENSCSEG00000008446)	cpeb3 (ENSCSEG00000008423)
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000176198	ENSGT00940000158658	ENSGT00900000142007	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000155525	ENSGT00940000176198	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c
Oryzias	ANCESTRAL SPECIES	6	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000018052	ENSGT00940000156530.c.`b.b	ENSGT00950000183091.A.b	ENSGT00390000004284.e	ENSGT00940000155933.b.a	ENSGT00940000163653	ENSGT01050000244827.E	ENSGT00950000183029.B.j.c.b	ENSGT00940000166291	ENSGT00940000163420	ENSGT00940000155483.f
Javanese ricefish	MODERN SPECIES	6	pcbd1 (ENSOJAG00000020064)	sgpl1 (ENSOJAG00000019866)	neurog3 (ENSOJAG00000019814)	pdlim1 (ENSOJAG00000019801)	SORBS1 (ENSOJAG00000019742)	ENSOJAG00000019721	fam204a (ENSOJAG00000019712)	RAB11FIP2 (ENSOJAG00000019706)	emx2 (ENSOJAG00000019692)	eif3s10 (ENSOJAG00000019632)	dennd10 (ENSOJAG00000019610)	sfxn4 (ENSOJAG00000019603)	prdx3 (ENSOJAG00000019576)	tm9sf3 (ENSOJAG00000019377)	si:ch211-117n7.7 (ENSOJAG00000019281)	zgc:110045 (ENSOJAG00000019155) #22	vwc2 (ENSOJAG00000019149)	ikzf1 (ENSOJAG00000019082)	fignl1 (ENSOJAG00000019074)	ttl (ENSOJAG00000019060)	pno1 (ENSOJAG00000019001)	dnaaf10 (ENSOJAG00000018831)	cnrip1b (ENSOJAG00000018812)	KCNQ5 (ENSOJAG00000018681)	ddx43 (ENSOJAG00000018507)	ENSOJAG00000018490	eef1a1b (ENSOJAG00000018399)	ENSOJAG00000018267	MAP4K3 (ENSOJAG00000015852)	ENSOJAG00000015574	sult6b1 (ENSOJAG00000015564)
Indian medaka	MODERN SPECIES	27	pdlim1 (ENSOMEG00000016530)	ENSOMEG00000016512	ENSOMEG00000016489	fam204a (ENSOMEG00000016441)	ENSOMEG00000016421	ENSOMEG00000016368	emx2 (ENSOMEG00000016353)	eif3s10 (ENSOMEG00000016323)	dennd10 (ENSOMEG00000016292)	ENSOMEG00000016264	prdx3 (ENSOMEG00000016096)	tm9sf3 (ENSOMEG00000015558)	si:ch211-117n7.7 (ENSOMEG00000015534)	ENSOMEG00000015500	ENSOMEG00000015473	ENSOMEG00000015459 #22	vwc2 (ENSOMEG00000015433)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907
Chinese medaka	MODERN SPECIES	832	ret (ENSOSIG00000011314)	ENSOSIG00000011531	si:dkey-192p21.6 (ENSOSIG00000011533)	pcbd1 (ENSOSIG00000011538)	sgpl1 (ENSOSIG00000011542)	ENSOSIG00000011548	pdlim1 (ENSOSIG00000011551)	ENSOSIG00000011556	fam204a (ENSOSIG00000011560)	ENSOSIG00000011563	emx2 (ENSOSIG00000011564)	dennd10 (ENSOSIG00000011686)	prdx3 (ENSOSIG00000011688)	tm9sf3 (ENSOSIG00000011689)	si:ch211-117n7.7 (ENSOSIG00000011721)	zgc:110045 (ENSOSIG00000011799) #22	vwc2 (ENSOSIG00000011801)	ikzf1 (ENSOSIG00000011802)	fignl1 (ENSOSIG00000011811)	ttl (ENSOSIG00000011812)
Japanese Medaka HdrR	MODERN SPECIES	6	neurog3 (ENSORLG00000028099)	ENSORLG00000027680	ENSORLG00000014121	ENSORLG00000028547	ENSORLG00000025192	fam204a (ENSORLG00000014133)	RAB11FIP2 (ENSORLG00000014141)	emx2 (ENSORLG00000014157)	eif3s10 (ENSORLG00000014215)	dennd10 (ENSORLG00000014242)	sfxn4 (ENSORLG00000028960)	prdx3 (ENSORLG00000014265)	tm9sf3 (ENSORLG00000014307)	si:ch211-117n7.7 (ENSORLG00000014318)	MOCOS (ENSORLG00000014333)	ENSORLG00000014385 #22	vwc2 (ENSORLG00000023061)	ikzf1 (ENSORLG00000029168)	fignl1 (ENSORLG00000020561)	ttl (ENSORLG00000022757)
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00940000155525	ENSGT00940000176198	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00940000155525	ENSGT00940000176198	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000011010.a.b	ENSGT00940000158924	ENSGT00940000158284	ENSGT00940000159342.b	ENSGT00800000124177	ENSGT00530000063564.a	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00390000000411
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.b.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.b.b.a.b.b.b.a.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.b.b.b	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000011010.a.b	ENSGT00940000158924	ENSGT00940000158284	ENSGT00940000174362.B	ENSGT00940000159342.b	ENSGT00800000124177	ENSGT00530000063564.a	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.b.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.b.b.a.b.b.b.a.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.b.b.b	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000011010.a.b	ENSGT00940000158924	ENSGT00940000158284	ENSGT00940000174362.B	ENSGT00940000159342.b	ENSGT00800000124177	ENSGT00530000063564.a	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00390000000411
NAME_6	ANCESTRAL SPECIES	449													ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.b.b.b	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c.b
Amazon molly	MODERN SPECIES	847													ENSPFOG00000003070	ENSPFOG00000003067	MOCOS (ENSPFOG00000002721)	zgc:110045 (ENSPFOG00000002348) #22	vwc2 (ENSPFOG00000002328)	ikzf1 (ENSPFOG00000002235)
Sailfin molly	MODERN SPECIES	2723														si:ch211-117n7.7 (ENSPLAG00000017456)	MOCOS (ENSPLAG00000017466)	zgc:110045 (ENSPLAG00000017488) #22
Guppy	MODERN SPECIES	445	ENSPREG00000002185	ENSPREG00000002168	fam204a (ENSPREG00000002154)	RAB11FIP2 (ENSPREG00000002138)	emx2 (ENSPREG00000002117)	ENSPREG00000002109	eif3s10 (ENSPREG00000002088)	dennd10 (ENSPREG00000002046)	sfxn4 (ENSPREG00000002002)	prdx3 (ENSPREG00000001978)	tm9sf3 (ENSPREG00000001930)	ENSPREG00000001889	ENSPREG00000001874	si:ch211-117n7.7 (ENSPREG00000001853)	MOCOS (ENSPREG00000001825)	zgc:110045 (ENSPREG00000001797) #22	vwc2 (ENSPREG00000001778)	ENSPREG00000001767	ikzf1 (ENSPREG00000001721)	ttl (ENSPREG00000001688)	cox5b2 (ENSPREG00000001646)	HERC4 (ENSPREG00000001565)	ENSPREG00000001546	ENSPREG00000001532	ENSPREG00000001508	mlh1 (ENSPREG00000001484)	lrrfip2 (ENSPREG00000001389)	dact2 (ENSPREG00000001353)	SMOC2 (ENSPREG00000001325)	eif3s6ip (ENSPREG00000001257)	vsir (ENSPREG00000001244)
Platyfish	MODERN SPECIES	14	emx2 (ENSXMAG00000025639)	eif3s10 (ENSXMAG00000007944)	ENSXMAG00000029111	dennd10 (ENSXMAG00000007970)	sfxn4 (ENSXMAG00000007978)	prdx3 (ENSXMAG00000007981)	tm9sf3 (ENSXMAG00000008001)	ENSXMAG00000028267	ENSXMAG00000023051	ENSXMAG00000027362	ENSXMAG00000026411	ENSXMAG00000027191	ENSXMAG00000024419	ENSXMAG00000024376	MOCOS (ENSXMAG00000008027)	zgc:110045 (ENSXMAG00000008030) #22	vwc2 (ENSXMAG00000008075)	ENSXMAG00000023437	ikzf1 (ENSXMAG00000024633)	fignl1 (ENSXMAG00000019831)	ttl (ENSXMAG00000008085)	cox5b2 (ENSXMAG00000025711)	HERC4 (ENSXMAG00000008095)	ENSXMAG00000008153	ENSXMAG00000025647	ENSXMAG00000026782	mlh1 (ENSXMAG00000008156)	lrrfip2 (ENSXMAG00000008181)	dact2 (ENSXMAG00000008191)	SMOC2 (ENSXMAG00000004572)	eif3s6ip (ENSXMAG00000004578)
NAME_4	ANCESTRAL SPECIES	58	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000173319	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00390000011010.a.b	ENSGT00940000158924.h	ENSGT00940000158284	ENSGT00940000159342.b	ENSGT00800000124177	ENSGT00530000063564.a	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00390000000411	ENSGT00940000163216	ENSGT00990000203760
Mummichog	MODERN SPECIES	524								emx2 (ENSFHEG00000018434)	eif3s10 (ENSFHEG00000018446)	dennd10 (ENSFHEG00000018480)	sfxn4 (ENSFHEG00000018506)	prdx3 (ENSFHEG00000018538)	tm9sf3 (ENSFHEG00000018574)	si:ch211-117n7.7 (ENSFHEG00000018604)	MOCOS (ENSFHEG00000018614)	ENSFHEG00000018838 #22	vwc2 (ENSFHEG00000018856)
Sheepshead minnow	MODERN SPECIES	123	neurog3 (ENSCVAG00000005283)	pdlim1 (ENSCVAG00000005274)	SORBS1 (ENSCVAG00000005248)	ENSCVAG00000000729	fam204a (ENSCVAG00000005180)	RAB11FIP2 (ENSCVAG00000005173)	emx2 (ENSCVAG00000005139)	eif3s10 (ENSCVAG00000005115)	ENSCVAG00000004914	dennd10 (ENSCVAG00000004907)	sfxn4 (ENSCVAG00000004885)	prdx3 (ENSCVAG00000004846)	tm9sf3 (ENSCVAG00000004824)	si:ch211-117n7.7 (ENSCVAG00000004790)	MOCOS (ENSCVAG00000004771)	zgc:110045 (ENSCVAG00000004726) #22	vwc2 (ENSCVAG00000004705)	ikzf1 (ENSCVAG00000004689)	fignl1 (ENSCVAG00000000902)	ttl (ENSCVAG00000004655)	ENSCVAG00000004628	cox5b2 (ENSCVAG00000004611)	HERC4 (ENSCVAG00000004597)	ENSCVAG00000004542	ENSCVAG00000004532	mlh1 (ENSCVAG00000004525)	lrrfip2 (ENSCVAG00000000131)	CCDC134 (ENSCVAG00000004441)	ENSCVAG00000004434	srebf2 (ENSCVAG00000004432)	nol12 (ENSCVAG00000004424)
Aplocheiloidei	ANCESTRAL SPECIES	28	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482.j	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500
Mangrove rivulus	MODERN SPECIES	255														si:ch211-117n7.7 (ENSKMAG00000016227)	MOCOS (ENSKMAG00000016207)	ENSKMAG00000016179 #22	vwc2 (ENSKMAG00000016158)	ikzf1 (ENSKMAG00000016136)	fignl1 (ENSKMAG00000016121)	ttl (ENSKMAG00000016105)	polr1b (ENSKMAG00000016037)	nanp (ENSKMAG00000016022)	cyp1b1 (ENSKMAG00000016000)	ENSKMAG00000015974	cdc42ep3 (ENSKMAG00000015962)	opn3 (ENSKMAG00000015952)	kmo (ENSKMAG00000015930)	ide (ENSKMAG00000015885)	marchf5 (ENSKMAG00000015868)	cpeb3 (ENSKMAG00000015854)	BTAF1 (ENSKMAG00000015780)
Turquoise killifish	MODERN SPECIES	1612	pdlim1 (ENSNFUG00015025220)	ENSNFUG00015025223	ENSNFUG00015025226	ENSNFUG00015025227	ENSNFUG00015025229	FAM204A (ENSNFUG00015025230)	RAB11FIP2 (ENSNFUG00015025233)	ENSNFUG00015025235	EMX2 (ENSNFUG00015025238)	EIF3S10 (ENSNFUG00015025241)	sfxn4 (ENSNFUG00015025247)	prdx3 (ENSNFUG00015025252)	tm9sf3 (ENSNFUG00015025274)	si:ch211-117n7.7 (ENSNFUG00015025280)	MOCOS (ENSNFUG00015025283)	Nfu_g_1_007869 (ENSNFUG00015025289) #22	ENSNFUG00015025291	ikzf1 (ENSNFUG00015025292)	FIGNL1 (ENSNFUG00015025294)	ENSNFUG00015025295	mcfd2 (ENSNFUG00015025296)	TTC7A (ENSNFUG00015000187)	ENSNFUG00015000216	ENSNFUG00015000225	calm2a (ENSNFUG00015000255)	ENSNFUG00015000303	ENSNFUG00015000316	PLEKHH2 (ENSNFUG00015000328)	ENSNFUG00015000385	ENSNFUG00015000472	ZFP36L2 (ENSNFUG00015000478)
Ovalentaria_B	ANCESTRAL SPECIES	25	ENSGT00940000155525	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00900000142007	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00900000142007	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907
Amphiprion	ANCESTRAL SPECIES	45	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183109.c.a.a.a.a	ENSGT00390000005029	ENSGT00940000164115.A.f.b.a.a.b.a	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593
Orange clownfish	MODERN SPECIES	12	sgpl1 (ENSAPEG00000024775)	neurog3 (ENSAPEG00000024779)	pdlim1 (ENSAPEG00000024781)	ENSAPEG00000024791	ENSAPEG00000024807	fam204a (ENSAPEG00000024808)	RAB11FIP2 (ENSAPEG00000024809)	emx2 (ENSAPEG00000000312)	eif3s10 (ENSAPEG00000000491)	dennd10 (ENSAPEG00000000514)	sfxn4 (ENSAPEG00000000585)	prdx3 (ENSAPEG00000000601)	tm9sf3 (ENSAPEG00000000610)	si:ch211-117n7.7 (ENSAPEG00000000636)	MOCOS (ENSAPEG00000000704)	zgc:110045 (ENSAPEG00000000729) #22	vwc2 (ENSAPEG00000000741)	ikzf1 (ENSAPEG00000000762)	fignl1 (ENSAPEG00000000794)	ttl (ENSAPEG00000000811)	wbp1la (ENSAPEG00000000943)	fbxw4 (ENSAPEG00000001006)	ENSAPEG00000001047	fgf8a (ENSAPEG00000001059)	slc2a15a (ENSAPEG00000001082)	ENSAPEG00000001191	ENSAPEG00000001218	ENSAPEG00000001269	ENSAPEG00000001282	ENSAPEG00000001289	tlx1 (ENSAPEG00000001309)
Clown anemonefish	MODERN SPECIES	1346	sgpl1 (ENSAOCG00000004973)	neurog3 (ENSAOCG00000000201)	pdlim1 (ENSAOCG00000004993)	ENSAOCG00000005028	ENSAOCG00000000209	fam204a (ENSAOCG00000005075)	RAB11FIP2 (ENSAOCG00000005080)	emx2 (ENSAOCG00000005089)	eif3s10 (ENSAOCG00000005109)	dennd10 (ENSAOCG00000005139)	sfxn4 (ENSAOCG00000005155)	prdx3 (ENSAOCG00000005166)	tm9sf3 (ENSAOCG00000005200)	si:ch211-117n7.7 (ENSAOCG00000005217)	MOCOS (ENSAOCG00000005246)	zgc:110045 (ENSAOCG00000005266) #22	vwc2 (ENSAOCG00000005272)	ikzf1 (ENSAOCG00000005308)	fignl1 (ENSAOCG00000005321)	ttl (ENSAOCG00000005340)	ENSAOCG00000005361
Spiny chromis	MODERN SPECIES	1492															MOCOS (ENSAPOG00000023801)	zgc:110045 (ENSAPOG00000023735) #22	vwc2 (ENSAPOG00000000669)	ENSAPOG00000023667	ikzf1 (ENSAPOG00000023640)	fignl1 (ENSAPOG00000023549)	ttl (ENSAPOG00000023540)
Bicolor damselfish	MODERN SPECIES	603	pdlim1 (ENSSPAG00000017975)	neurog3 (ENSSPAG00000018007)	ENSSPAG00000018024	ENSSPAG00000000035	ENSSPAG00000000043	fam204a (ENSSPAG00000000068)	RAB11FIP2 (ENSSPAG00000000078)	emx2 (ENSSPAG00000000082)	eif3s10 (ENSSPAG00000000094)	dennd10 (ENSSPAG00000000337)	sfxn4 (ENSSPAG00000000392)	prdx3 (ENSSPAG00000000404)	tm9sf3 (ENSSPAG00000000421)	si:ch211-117n7.7 (ENSSPAG00000000479)	MOCOS (ENSSPAG00000000548)	zgc:110045 (ENSSPAG00000000563) #22	vwc2 (ENSSPAG00000000580)	ENSSPAG00000000594	ikzf1 (ENSSPAG00000000626)	fignl1 (ENSSPAG00000000651)	ENSSPAG00000000663
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780	ENSGT00390000009948.c
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.a.b	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780.o
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00940000157736	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.a.b	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780.o
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00990000205745	ENSGT00940000157736	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.a.b	ENSGT01100000263502.A.a.b	ENSGT00390000000747
Burton s mouthbrooder	MODERN SPECIES	353	sgpl1 (ENSHBUG00000011997)	neurog3 (ENSHBUG00000012034)	pdlim1 (ENSHBUG00000012064)	ENSHBUG00000012133	ENSHBUG00000012158	fam204a (ENSHBUG00000012164)	RAB11FIP2 (ENSHBUG00000012171)	emx2 (ENSHBUG00000012199)	eif3s10 (ENSHBUG00000012286)	dennd10 (ENSHBUG00000012319)	sfxn4 (ENSHBUG00000012364)	prdx3 (ENSHBUG00000012389)	tm9sf3 (ENSHBUG00000012429)	si:ch211-117n7.7 (ENSHBUG00000012449)	MOCOS (ENSHBUG00000012470)	zgc:110045 (ENSHBUG00000012495) #22	vwc2 (ENSHBUG00000012514)	ENSHBUG00000012524	ikzf1 (ENSHBUG00000012566)	fignl1 (ENSHBUG00000012574)	ttl (ENSHBUG00000012602)	polr1b (ENSHBUG00000012650)	nanp (ENSHBUG00000012607)	cyp1b1 (ENSHBUG00000012667)
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00940000162768.A	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00990000205745	ENSGT00940000157736	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.a.b	ENSGT01100000263502.A.a.b	ENSGT00390000000747
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00730000111063	ENSGT00940000164222	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000155493	ENSGT00940000165086.b	ENSGT00940000157051	ENSGT00940000162185 #22	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183132.B	ENSGT00390000003094	ENSGT00950000183037.B.a	ENSGT00950000182992.a.b.a.a	ENSGT00990000205745	ENSGT00940000157736	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.b.a.a.b	ENSGT01100000263502.A.a.b	ENSGT00390000000747	ENSGT00940000155780.o
Zebra mbuna	MODERN SPECIES	1095	sgpl1 (ENSMZEG00005011531)	neurog3 (ENSMZEG00005011555)	pdlim1 (ENSMZEG00005011560)	ENSMZEG00005011582	ENSMZEG00005011633	fam204a (ENSMZEG00005011650)	RAB11FIP2 (ENSMZEG00005011664)	emx2 (ENSMZEG00005011675)	eif3s10 (ENSMZEG00005011687)	dennd10 (ENSMZEG00005011705)	sfxn4 (ENSMZEG00005011716)	prdx3 (ENSMZEG00005011726)	tm9sf3 (ENSMZEG00005011738)	si:ch211-117n7.7 (ENSMZEG00005011758)	MOCOS (ENSMZEG00005011771)	zgc:110045 (ENSMZEG00005011785) #22	vwc2 (ENSMZEG00005011800)	ENSMZEG00005011805	ikzf1 (ENSMZEG00005011814)	fignl1 (ENSMZEG00005011830)	ttl (ENSMZEG00005011836)	polr1b (ENSMZEG00005011850)	nanp (ENSMZEG00005011895)	cyp1b1 (ENSMZEG00005011902)	ENSMZEG00005011912	ENSMZEG00005011927	cdc42ep3 (ENSMZEG00005011936)	ENSMZEG00005011942	opn3 (ENSMZEG00005011964)	kmo (ENSMZEG00005011976)	ide (ENSMZEG00005011998)
Eastern happy	MODERN SPECIES	4	sgpl1 (ENSACLG00000020094)	neurog3 (ENSACLG00000020073)	pdlim1 (ENSACLG00000020045)	ENSACLG00000019832	ENSACLG00000019795	fam204a (ENSACLG00000019771)	RAB11FIP2 (ENSACLG00000019737)	emx2 (ENSACLG00000019701)	eif3s10 (ENSACLG00000019633)	dennd10 (ENSACLG00000019595)	sfxn4 (ENSACLG00000019563)	prdx3 (ENSACLG00000019533)	tm9sf3 (ENSACLG00000019412)	si:ch211-117n7.7 (ENSACLG00000019357)	MOCOS (ENSACLG00000019326)	zgc:110045 (ENSACLG00000019285) #22	vwc2 (ENSACLG00000019267)	ENSACLG00000019250	ikzf1 (ENSACLG00000019183)	fignl1 (ENSACLG00000019173)	ttl (ENSACLG00000019158)	polr1b (ENSACLG00000019089)	nanp (ENSACLG00000019128)	cyp1b1 (ENSACLG00000019072)	ENSACLG00000019021	ENSACLG00000018996	cdc42ep3 (ENSACLG00000018959)	ENSACLG00000018938	opn3 (ENSACLG00000018901)	kmo (ENSACLG00000018863)	ide (ENSACLG00000018807)
P. nyererei	MODERN SPECIES	357	neurog3 (ENSPNYG00000004189)	pdlim1 (ENSPNYG00000004208)	ENSPNYG00000004261	ENSPNYG00000004337	ENSPNYG00000004356	fam204a (ENSPNYG00000004383)	RAB11FIP2 (ENSPNYG00000004434)	emx2 (ENSPNYG00000004443)	eif3s10 (ENSPNYG00000004463)	dennd10 (ENSPNYG00000004489)	sfxn4 (ENSPNYG00000004513)	prdx3 (ENSPNYG00000004538)	tm9sf3 (ENSPNYG00000004560)	si:ch211-117n7.7 (ENSPNYG00000004605)	MOCOS (ENSPNYG00000004621)	zgc:110045 (ENSPNYG00000004637) #22	ENSPNYG00000004656	vwc2 (ENSPNYG00000004675)	ENSPNYG00000004690	ikzf1 (ENSPNYG00000004706)	fignl1 (ENSPNYG00000004728)	ttl (ENSPNYG00000004738)	polr1b (ENSPNYG00000004767)	nanp (ENSPNYG00000004822)	ENSPNYG00000004830	cyp1b1 (ENSPNYG00000004853)	ENSPNYG00000004938	ENSPNYG00000004952	cdc42ep3 (ENSPNYG00000004962)	ENSPNYG00000004976	opn3 (ENSPNYG00000004992)
Lyretail cichlid	MODERN SPECIES	349	sgpl1 (ENSNBRG00000017161)	neurog3 (ENSNBRG00000017203)	pdlim1 (ENSNBRG00000017211)	ENSNBRG00000017256	ENSNBRG00000017396	fam204a (ENSNBRG00000017418)	RAB11FIP2 (ENSNBRG00000017441)	emx2 (ENSNBRG00000017466)	eif3s10 (ENSNBRG00000017477)	dennd10 (ENSNBRG00000017512)	sfxn4 (ENSNBRG00000017533)	prdx3 (ENSNBRG00000017556)	tm9sf3 (ENSNBRG00000017572)	si:ch211-117n7.7 (ENSNBRG00000017601)	MOCOS (ENSNBRG00000017626)	zgc:110045 (ENSNBRG00000017646) #22	vwc2 (ENSNBRG00000017668)	ENSNBRG00000017691	ikzf1 (ENSNBRG00000017751)	fignl1 (ENSNBRG00000017951)	ttl (ENSNBRG00000017961)	polr1b (ENSNBRG00000017979)	nanp (ENSNBRG00000018023)	cyp1b1 (ENSNBRG00000018040)	ENSNBRG00000018090	cdc42ep3 (ENSNBRG00000018135)	ENSNBRG00000018145	opn3 (ENSNBRG00000018151)	kmo (ENSNBRG00000018177)	ide (ENSNBRG00000018228)	ide (ENSNBRG00000018270)
Nile tilapia	MODERN SPECIES	4	sgpl1 (ENSONIG00000010329)	neurog3 (ENSONIG00000033870)	pdlim1 (ENSONIG00000010331)	ENSONIG00000010334	ENSONIG00000010335	fam204a (ENSONIG00000032538)	RAB11FIP2 (ENSONIG00000010342)	emx2 (ENSONIG00000010343)	eif3s10 (ENSONIG00000010344)	dennd10 (ENSONIG00000010349)	sfxn4 (ENSONIG00000010353)	prdx3 (ENSONIG00000010357)	tm9sf3 (ENSONIG00000010363)	si:ch211-117n7.7 (ENSONIG00000040104)	MOCOS (ENSONIG00000010367)	zgc:110045 (ENSONIG00000010370) #22	vwc2 (ENSONIG00000010377)	SPATA48 (ENSONIG00000010378)	ikzf1 (ENSONIG00000010379)	fignl1 (ENSONIG00000021269)	ttl (ENSONIG00000010380)	polr1b (ENSONIG00000010382)	nanp (ENSONIG00000010387)	cyp1b1 (ENSONIG00000035380)	ENSONIG00000010389	cdc42ep3 (ENSONIG00000038744)	ENSONIG00000030170	opn3 (ENSONIG00000035292)	kmo (ENSONIG00000010392)	ide (ENSONIG00000014828)	marchf5 (ENSONIG00000030215)
Midas cichlid	MODERN SPECIES	354	neurog3 (ENSACIG00000003362)	pdlim1 (ENSACIG00000003219)	SORBS1 (ENSACIG00000003174)	ENSACIG00000003145	ENSACIG00000003109	fam204a (ENSACIG00000003082)	RAB11FIP2 (ENSACIG00000003068)	emx2 (ENSACIG00000003052)	eif3s10 (ENSACIG00000002889)	dennd10 (ENSACIG00000002853)	sfxn4 (ENSACIG00000002836)	prdx3 (ENSACIG00000002819)	tm9sf3 (ENSACIG00000002795)	si:ch211-117n7.7 (ENSACIG00000002736)	MOCOS (ENSACIG00000002689)	zgc:110045 (ENSACIG00000002577) #22	vwc2 (ENSACIG00000002545)	ENSACIG00000002534	ikzf1 (ENSACIG00000002401)	ttl (ENSACIG00000002346)	fignl1 (ENSACIG00000002335)	polr1b (ENSACIG00000002290)	nanp (ENSACIG00000002282)	cyp1b1 (ENSACIG00000002206)	ENSACIG00000002175	cdc42ep3 (ENSACIG00000002166)	opn3 (ENSACIG00000002135)	kmo (ENSACIG00000002102)	ide (ENSACIG00000002043)	ide (ENSACIG00000001988)	marchf5 (ENSACIG00000001966)