Eutheria	ANCESTRAL SPECIES	11	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259	ENSGT00490000043329.a.a.a #34
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34
Primates	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.a.b ##31	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b ##11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a.dc.b ##9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.a #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Cebidae	ANCESTRAL SPECIES	13	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a.dc.b ##9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.a.c #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Marmoset	MODERN SPECIES	17	ENSCJAG00000047561 #7	ENSCJAG00000084324 #8	AHCY (ENSCJAG00000018303) #9	ASIP (ENSCJAG00000018327) #10	ENSCJAG00000018334 #11	ENSCJAG00000018361 #12	CHMP4B (ENSCJAG00000018397) #13	ZNF341 (ENSCJAG00000018423) #14	PXMP4 (ENSCJAG00000080526) #15	E2F1 (ENSCJAG00000018451) #16	NECAB3 (ENSCJAG00000018455) #17	ACTL10 (ENSCJAG00000058257) #18	CBFA2T2 (ENSCJAG00000018475) #19	ENSCJAG00000071493 #20	SNTA1 (ENSCJAG00000046751) #21	CDK5RAP1 (ENSCJAG00000018500) #22	ENSCJAG00000074490 #23	BPIFB1 (ENSCJAG00000018531) #24	BPIFA1 (ENSCJAG00000018547) #25	BPIFA3 (ENSCJAG00000018565) #26	BPIFA2 (ENSCJAG00000018544) #27	BPIFB4 (ENSCJAG00000034914) #28	BPIFB3 (ENSCJAG00000018580) #29	BPIFB6 (ENSCJAG00000018589) #30	BPIFB2 (ENSCJAG00000018598) #31	SUN5 (ENSCJAG00000018611) #32	EFCAB8 (ENSCJAG00000083357) #33	ENSCJAG00000015601 #34	DNMT3B (ENSCJAG00000015617) #35	ENSCJAG00000072168 #36	COMMD7 (ENSCJAG00000038577) #37
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a.dc.b ##9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.a.c #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729
Bolivian squirrel monkey	MODERN SPECIES	89	ENSSBOG00000034562	ITCH (ENSSBOG00000028570)	AHCY (ENSSBOG00000018930) ##9	ENSSBOG00000035159	ENSSBOG00000020845 ##11	RALY (ENSSBOG00000001418) #12	CHMP4B (ENSSBOG00000030524) #13	ZNF341 (ENSSBOG00000026329) #14	PXMP4 (ENSSBOG00000005223) #15	E2F1 (ENSSBOG00000028962) #16	NECAB3 (ENSSBOG00000036045) #17	ACTL10 (ENSSBOG00000004671) #18	C20orf144 (ENSSBOG00000026299)	CBFA2T2 (ENSSBOG00000029834) #19	SNTA1 (ENSSBOG00000020201) #21	CDK5RAP1 (ENSSBOG00000034885) #22	BPIFB1 (ENSSBOG00000023508) #24	BPIFA1 (ENSSBOG00000033533) #25	BPIFA3 (ENSSBOG00000031059) #26	ENSSBOG00000035555	BPIFA2 (ENSSBOG00000031635) #27	BPIFB4 (ENSSBOG00000034867) #28	BPIFB3 (ENSSBOG00000035285) #29	BPIFB6 (ENSSBOG00000015194) #30	BPIFB2 (ENSSBOG00000023467) #31	SUN5 (ENSSBOG00000036230) #32	EFCAB8 (ENSSBOG00000035195) #33	MAPRE1 (ENSSBOG00000026959) #34	DNMT3B (ENSSBOG00000030711) #35	NOL4L (ENSSBOG00000020030)	ASXL1 (ENSSBOG00000023781)
Capuchin	MODERN SPECIES	18	ENSCCAG00000036415 ##9	ASIP (ENSCCAG00000034213) #10	ENSCCAG00000035446 #11	RALY (ENSCCAG00000024548) #12	CHMP4B (ENSCCAG00000035412) #13	ZNF341 (ENSCCAG00000022663) #14	PXMP4 (ENSCCAG00000023929) #15	E2F1 (ENSCCAG00000031862) #16	NECAB3 (ENSCCAG00000025337) #17	ACTL10 (ENSCCAG00000020021) #18	C20orf144 (ENSCCAG00000001393)	CBFA2T2 (ENSCCAG00000030202) #19	ENSCCAG00000020608	ENSCCAG00000023290	SNTA1 (ENSCCAG00000037245) #21	CDK5RAP1 (ENSCCAG00000031228) #22	BPIFB1 (ENSCCAG00000015758) #24	BPIFA1 (ENSCCAG00000021907) #25	BPIFA3 (ENSCCAG00000022344) #26	ENSCCAG00000034919 ##31	BPIFA2 (ENSCCAG00000021755) #27	BPIFB4 (ENSCCAG00000027553) #28	BPIFB3 (ENSCCAG00000022192) #29	BPIFB6 (ENSCCAG00000030049) #30	BPIFB2 (ENSCCAG00000030652) #31	SUN5 (ENSCCAG00000034764) #32	EFCAB8 (ENSCCAG00000022910) #33	MAPRE1 (ENSCCAG00000030764) #34	ENSCCAG00000020225 #35	COMMD7 (ENSCCAG00000031234) #37	NOL4L (ENSCCAG00000028160)
Mas night monkey	MODERN SPECIES	1017	ITCH (ENSANAG00000027856)	ENSANAG00000014301	ENSANAG00000033573 ##9	ASIP (ENSANAG00000030668) #10	ENSANAG00000022839 #11	RALY (ENSANAG00000019376) #12	CHMP4B (ENSANAG00000023014) #13	ZNF341 (ENSANAG00000023240) #14	PXMP4 (ENSANAG00000031512) #15	E2F1 (ENSANAG00000029428) #16	C20orf144 (ENSANAG00000028577)	NECAB3 (ENSANAG00000024109) #17	CBFA2T2 (ENSANAG00000029831) #19	ENSANAG00000022327	SNTA1 (ENSANAG00000021276) #21	CDK5RAP1 (ENSANAG00000036607) #22	BPIFB1 (ENSANAG00000024111) #24	BPIFA1 (ENSANAG00000023955) #25	BPIFA3 (ENSANAG00000029660) #26	ENSANAG00000026946	BPIFA2 (ENSANAG00000020124) #27	BPIFB4 (ENSANAG00000021575) #28	BPIFB3 (ENSANAG00000005106) #29	BPIFB6 (ENSANAG00000034061) #30	BPIFB2 (ENSANAG00000023925) #31	SUN5 (ENSANAG00000026404) #32	EFCAB8 (ENSANAG00000029449) #33	MAPRE1 (ENSANAG00000035566) #34	ENSANAG00000025386 #35	COMMD7 (ENSANAG00000007345) #37	NOL4L (ENSANAG00000033711)
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00920000150801
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.a.b ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00920000150801
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.a.b ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00920000150801
Vervet Monkey	MODERN SPECIES	11	DYNLRB1 (ENSCSAG00000012088)	ITCH (ENSCSAG00000012102)	AHCY (ENSCSAG00000012115) #9	ASIP (ENSCSAG00000012125) #10	EIF2S2 (ENSCSAG00000012138) ##11	RALY (ENSCSAG00000012199) #12	CHMP4B (ENSCSAG00000012213) #13	ZNF341 (ENSCSAG00000012235) #14	PXMP4 (ENSCSAG00000012247) #15	E2F1 (ENSCSAG00000012265) #16	ACTL10 (ENSCSAG00000018668) #18	C20orf144 (ENSCSAG00000012277)	NECAB3 (ENSCSAG00000012279) #17	CBFA2T2 (ENSCSAG00000012281) #19	SNTA1 (ENSCSAG00000012284) #21	CDK5RAP1 (ENSCSAG00000012289) #22	BPIFB1 (ENSCSAG00000012293) #24	BPIFA1 (ENSCSAG00000012315) #25	BPIFA3 (ENSCSAG00000012337) #26	BPIFA2 (ENSCSAG00000012361) #27	BPIFB4 (ENSCSAG00000012383) #28	BPIFB3 (ENSCSAG00000012411) #29	BPIFB6 (ENSCSAG00000012441) #30	BPIFB2 (ENSCSAG00000012461) #31	SUN5 (ENSCSAG00000012504) #32	ENSCSAG00000012522	MAPRE1 (ENSCSAG00000012529) #34	DNMT3B (ENSCSAG00000012573) #35	COMMD7 (ENSCSAG00000012589) #37	ENSCSAG00000012596	NOL4L (ENSCSAG00000012605)
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00390000001804.cb.b.a.b ##11	ENSGT00910000147823	ENSGT00390000001804.cb.b.a.a ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00390000018318.u.b.a.a.n.b	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000153095.g.b.a.b.o	ENSGT00390000001804.cb.b.a.b ##11	ENSGT00910000147823	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00390000018318.u.b.a.a.n.b	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Olive baboon	MODERN SPECIES	7	MAP1LC3A (ENSPANG00000014240)	DYNLRB1 (ENSPANG00000009941)	ITCH (ENSPANG00000009940)	AHCY (ENSPANG00000026274) #9	ASIP (ENSPANG00000022711) #10	ENSPANG00000048492 ##11	ENSPANG00000018093 #12	CHMP4B (ENSPANG00000018095) #13	ZNF341 (ENSPANG00000018096) #14	PXMP4 (ENSPANG00000016747) #15	E2F1 (ENSPANG00000006985) #16	ACTL10 (ENSPANG00000004544) #18	C20orf144 (ENSPANG00000017513)	NECAB3 (ENSPANG00000025546) #17	CBFA2T2 (ENSPANG00000022710) #19	CDK5RAP1 (ENSPANG00000025545) #22	BPIFB1 (ENSPANG00000017512) #24	BPIFA1 (ENSPANG00000024267) #25	BPIFA3 (ENSPANG00000021778) #26	BPIFA2 (ENSPANG00000024266) #27	BPIFB4 (ENSPANG00000022709) #28	BPIFB3 (ENSPANG00000020552) #29	BPIFB6 (ENSPANG00000009734) #30	BPIFB2 (ENSPANG00000019996) #31	ENSPANG00000024494 #32	EFCAB8 (ENSPANG00000023852) #33	MAPRE1 (ENSPANG00000016611) #34	DNMT3B (ENSPANG00000013451) #35	COMMD7 (ENSPANG00000001132) #37	C20orf203 (ENSPANG00000050681)	NOL4L (ENSPANG00000025052)
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00940000153095.g.b.a.b.o	ENSGT00390000001804.cb.b.a.b ##11	ENSGT00910000147823	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00390000018318.u.b.a.a.n.b	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Drill	MODERN SPECIES	1448	ENSMLEG00000033651	EIF2S2 (ENSMLEG00000039854) ##11	ENSMLEG00000004937	RALY (ENSMLEG00000028900) #12	ENSMLEG00000000187	CHMP4B (ENSMLEG00000033156) #13	ZNF341 (ENSMLEG00000031946) #14	PXMP4 (ENSMLEG00000032170) #15	E2F1 (ENSMLEG00000004422) #16	ACTL10 (ENSMLEG00000008960) #18	C20orf144 (ENSMLEG00000044204)	NECAB3 (ENSMLEG00000041816) #17	ENSMLEG00000010723	CBFA2T2 (ENSMLEG00000042497) #19	SNTA1 (ENSMLEG00000040271) #21	CDK5RAP1 (ENSMLEG00000029036) #22
Sooty mangabey	MODERN SPECIES	602	ENSCATG00000044570	ENSCATG00000044082 ##11	ENSCATG00000022568	RALY (ENSCATG00000031769) #12	ENSCATG00000032333	CHMP4B (ENSCATG00000044221) #13	ZNF341 (ENSCATG00000011236) #14	PXMP4 (ENSCATG00000044653) #15	E2F1 (ENSCATG00000039419) #16	ACTL10 (ENSCATG00000022465) #18	C20orf144 (ENSCATG00000044672)	NECAB3 (ENSCATG00000034703) #17	ENSCATG00000022295	CBFA2T2 (ENSCATG00000006176) #19	SNTA1 (ENSCATG00000044322) #21	CDK5RAP1 (ENSCATG00000039579) #22	BPIFB1 (ENSCATG00000026260) #24	BPIFA1 (ENSCATG00000042760) #25	BPIFA3 (ENSCATG00000041213) #26	ENSCATG00000029740	BPIFA2 (ENSCATG00000042233) #27	BPIFB4 (ENSCATG00000008536) #28	BPIFB3 (ENSCATG00000043728) #29	BPIFB6 (ENSCATG00000032216) #30	BPIFB2 (ENSCATG00000035818) #31	SUN5 (ENSCATG00000030423) #32	ENSCATG00000038780	EFCAB8 (ENSCATG00000043154) #33	MAPRE1 (ENSCATG00000041722) #34	DNMT3B (ENSCATG00000029815) #35	COMMD7 (ENSCATG00000033743) #37
Macaca	ANCESTRAL SPECIES	16	ENSGT00390000001804.cb.b.a.b ##11	ENSGT00910000147823	ENSGT00390000001804.cb.b.a.a ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.a.b ##31	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00390000018318.u.b.a.a.n.b	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00940000153095.g.b.a.b.o	ENSGT00390000001804.cb.b.a.a ##11	ENSGT00940000157601 #12	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT01100000263539.b.b.b.a.a.a.b	ENSGT00940000159472 #16	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.b.b.a.a.a.b.a.a.b.a	ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.b.b.b ##36	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.a.b ##31	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00390000018318.u.b.a.a.n.b	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Crab-eating macaque	MODERN SPECIES	1	ENSMFAG00000050321	ENSMFAG00000051093	CHMP4B (ENSMFAG00000040050) #13	ENSMFAG00000045920 #14	ENSMFAG00000039376 #15	ENSMFAG00000047376	E2F1 (ENSMFAG00000042416) #16	C20orf144 (ENSMFAG00000038184)	NECAB3 (ENSMFAG00000035873) #17	ENSMFAG00000050553	CBFA2T2 (ENSMFAG00000000820) #19	ENSMFAG00000051247	ENSMFAG00000047567 ##36	ENSMFAG00000053042	SNTA1 (ENSMFAG00000039231) #21	CDK5RAP1 (ENSMFAG00000040526) #22	BPIFB1 (ENSMFAG00000036542) #24	BPIFA1 (ENSMFAG00000041209) #25	BPIFA3 (ENSMFAG00000002677) #26	BPIFA2 (ENSMFAG00000032051) #27	BPIFB4 (ENSMFAG00000030797) #28	BPIFB3 (ENSMFAG00000042929) #29	BPIFB6 (ENSMFAG00000036761) #30	BPIFB2 (ENSMFAG00000040564) #31	SUN5 (ENSMFAG00000035909) #32	EFCAB8 (ENSMFAG00000006242) #33	MAPRE1 (ENSMFAG00000007474) #34	DNMT3B (ENSMFAG00000040834) #35	COMMD7 (ENSMFAG00000041599) #37	C20orf203 (ENSMFAG00000063893)	NOL4L (ENSMFAG00000038591)
Rhesus	MODERN SPECIES	1	ENSMMUG00000056046	EIF2S2 (ENSMMUG00000018095) ##11	RALY (ENSMMUG00000018093) #12	CHMP4B (ENSMMUG00000008084) #13	ZNF341 (ENSMMUG00000021492) #14	PXMP4 (ENSMMUG00000023551) #15	ENSMMUG00000064963	E2F1 (ENSMMUG00000023550) #16	C10H20orf144 (ENSMMUG00000023548)	NECAB3 (ENSMMUG00000023543) #17	ENSMMUG00000052335	ENSMMUG00000063982	CBFA2T2 (ENSMMUG00000023541) #19	ENSMMUG00000055776	ENSMMUG00000050166 ##36	CDK5RAP1 (ENSMMUG00000008470) #22	BPIFB1 (ENSMMUG00000062078) #24	BPIFA1 (ENSMMUG00000008925) #25	BPIFA3 (ENSMMUG00000008928) #26	BPIFA4 (ENSMMUG00000042013) ##31	BPIFA2 (ENSMMUG00000059440) #27	BPIFB4 (ENSMMUG00000020676) #28	BPIFB3 (ENSMMUG00000020671) #29	BPIFB6 (ENSMMUG00000020669) #30	BPIFB2 (ENSMMUG00000053133) #31	SUN5 (ENSMMUG00000009414) #32	ENSMMUG00000046729	EFCAB8 (ENSMMUG00000037750) #33	MAPRE1 (ENSMMUG00000063227) #34	DNMT3B (ENSMMUG00000019474) #35	C10H20orf203 (ENSMMUG00000063470)
Pig-tailed macaque	MODERN SPECIES	232	ENSMNEG00000029730	ENSMNEG00000044539	EIF2S2 (ENSMNEG00000029852) ##11	ENSMNEG00000018000	RALY (ENSMNEG00000044988) #12	ENSMNEG00000039504	CHMP4B (ENSMNEG00000032657) #13	ZNF341 (ENSMNEG00000034107) #14	PXMP4 (ENSMNEG00000010793) #15	E2F1 (ENSMNEG00000027050) #16	ACTL10 (ENSMNEG00000026090) #18	C20orf144 (ENSMNEG00000045111)	NECAB3 (ENSMNEG00000040091) #17	CBFA2T2 (ENSMNEG00000034428) #19	SNTA1 (ENSMNEG00000038405) #21	CDK5RAP1 (ENSMNEG00000045565) #22	BPIFB1 (ENSMNEG00000043489) #24	BPIFA1 (ENSMNEG00000044088) #25	BPIFA3 (ENSMNEG00000005575) #26	ENSMNEG00000028931 ##31	BPIFA2 (ENSMNEG00000042823) #27	BPIFB4 (ENSMNEG00000043965) #28	BPIFB3 (ENSMNEG00000038601) #29	BPIFB6 (ENSMNEG00000035018) #30	BPIFB2 (ENSMNEG00000029774) #31	SUN5 (ENSMNEG00000033611) #32	ENSMNEG00000036815	EFCAB8 (ENSMNEG00000035540) #33	MAPRE1 (ENSMNEG00000039307) #34	DNMT3B (ENSMNEG00000038981) #35	COMMD7 (ENSMNEG00000041156) #37
Rhinopithecus	ANCESTRAL SPECIES	28	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.b ##11	ENSGT00390000001804.cb.b.a.b.d ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928.a #35	ENSGT00390000012419 #37	ENSGT00940000157729
Black snub-nosed monkey	MODERN SPECIES	751															SNTA1 (ENSRBIG00000036776) #21	CDK5RAP1 (ENSRBIG00000041507) #22	BPIFB1 (ENSRBIG00000023420) #24	BPIFA1 (ENSRBIG00000028541) #25	BPIFA3 (ENSRBIG00000035313) #26	ENSRBIG00000028643	BPIFA2 (ENSRBIG00000015461) #27	BPIFB4 (ENSRBIG00000032341) #28	BPIFB3 (ENSRBIG00000036953) #29	BPIFB6 (ENSRBIG00000024079) #30	BPIFB2 (ENSRBIG00000034361) #31	SUN5 (ENSRBIG00000030532) #32	EFCAB8 (ENSRBIG00000043449) #33	MAPRE1 (ENSRBIG00000042693) #34	ENSRBIG00000040209 #35	COMMD7 (ENSRBIG00000029627) #37	ENSRBIG00000037083
Golden snub-nosed monkey	MODERN SPECIES	896						ENSRROG00000039774	CHMP4B (ENSRROG00000029883) #13	ZNF341 (ENSRROG00000032773) #14	PXMP4 (ENSRROG00000033853) #15	E2F1 (ENSRROG00000039358) #16	NECAB3 (ENSRROG00000010016) #17	ACTL10 (ENSRROG00000009546) #18	C20orf144 (ENSRROG00000044990)	CBFA2T2 (ENSRROG00000035361) #19	SNTA1 (ENSRROG00000042592) #21	CDK5RAP1 (ENSRROG00000037532) #22	BPIFB1 (ENSRROG00000034793) #24	BPIFA1 (ENSRROG00000029579) #25	BPIFA3 (ENSRROG00000041448) #26	ENSRROG00000045498	BPIFA2 (ENSRROG00000038035) #27	BPIFB4 (ENSRROG00000043803) #28	BPIFB3 (ENSRROG00000040199) #29	BPIFB6 (ENSRROG00000030178) #30	BPIFB2 (ENSRROG00000041108) #31	SUN5 (ENSRROG00000043627) #32
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.c.a ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00920000150801
Hominidae	ANCESTRAL SPECIES	18	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.c.a ##11	ENSGT00940000157601 #12	ENSGT00390000013771.v	ENSGT00940000154663.u #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00920000150801
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00940000163568	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.c.a ##11	ENSGT00940000157601 #12	ENSGT00940000154663.u #13	ENSGT00950000183030.m.a.a.b.a.b.a.b	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00910000147530	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00410000028250
Gorilla	MODERN SPECIES	11	ASIP (ENSGGOG00000026572) #10	ENSGGOG00000027170	ENSGGOG00000015546 ##11	RALY (ENSGGOG00000022709) #12	CHMP4B (ENSGGOG00000007775) #13	ENSGGOG00000025590	ZNF341 (ENSGGOG00000015775) #14	PXMP4 (ENSGGOG00000044115) #15	E2F1 (ENSGGOG00000003588) #16	ACTL10 (ENSGGOG00000042107) #18	C20orf144 (ENSGGOG00000038124)	NECAB3 (ENSGGOG00000003584) #17	ENSGGOG00000043692	ENSGGOG00000003578 #19	SNTA1 (ENSGGOG00000008508) #21	ENSGGOG00000003253 #22	BPIFB1 (ENSGGOG00000003242) #24	BPIFA1 (ENSGGOG00000027809) #25	BPIFA3 (ENSGGOG00000023198) #26	ENSGGOG00000017163	BPIFA2 (ENSGGOG00000017162) #27	BPIFB4 (ENSGGOG00000011742) #28	BPIFB3 (ENSGGOG00000010657) #29	BPIFB6 (ENSGGOG00000010638) #30	BPIFB2 (ENSGGOG00000010625) #31	SUN5 (ENSGGOG00000008288) #32	EFCAB8 (ENSGGOG00000000152) #33	ENSGGOG00000022496 #34	DNMT3B (ENSGGOG00000009533) #35	ENSGGOG00000026150 #37	ENSGGOG00000012789
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00940000163568	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.c.a ##11	ENSGT00940000157601 #12	ENSGT00940000154663.u #13	ENSGT00950000183030.m.a.a.b.a.b.a.b	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00920000150801
Pan	ANCESTRAL SPECIES	15	ENSGT00940000163568	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.cb.b.d ##11	ENSGT00940000157601 #12	ENSGT00940000154663.u #13	ENSGT00950000183030.m.a.a.b.a.b.a.b	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00410000028250
Bonobo	MODERN SPECIES	11	ENSPPAG00000043799	ENSPPAG00000041601	ENSPPAG00000041611	ENSPPAG00000043449 ##11	RALY (ENSPPAG00000034951) #12	CHMP4B (ENSPPAG00000028496) #13	ENSPPAG00000037596	ZNF341 (ENSPPAG00000037384) #14	PXMP4 (ENSPPAG00000028570) #15	E2F1 (ENSPPAG00000025868) #16	ACTL10 (ENSPPAG00000026624) #18	C20orf144 (ENSPPAG00000042847)	NECAB3 (ENSPPAG00000039394) #17	CBFA2T2 (ENSPPAG00000042396) #19	SNTA1 (ENSPPAG00000029137) #21	CDK5RAP1 (ENSPPAG00000008989) #22	BPIFB1 (ENSPPAG00000029535) #24	BPIFA1 (ENSPPAG00000034693) #25	BPIFA3 (ENSPPAG00000011914) #26	ENSPPAG00000041776	BPIFA2 (ENSPPAG00000038731) #27	BPIFB4 (ENSPPAG00000042697) #28	BPIFB3 (ENSPPAG00000036747) #29	BPIFB6 (ENSPPAG00000019659) #30	BPIFB2 (ENSPPAG00000041501) #31	SUN5 (ENSPPAG00000029851) #32	EFCAB8 (ENSPPAG00000043457) #33	MAPRE1 (ENSPPAG00000025593) #34	DNMT3B (ENSPPAG00000034470) #35	COMMD7 (ENSPPAG00000038127) #37	ENSPPAG00000036278
Chimpanzee	MODERN SPECIES	11	ASIP (ENSPTRG00000013413) #10	ENSPTRG00000046065	ENSPTRG00000045368	EIF2S2 (ENSPTRG00000013412) ##11	RALY (ENSPTRG00000013410) #12	CHMP4B (ENSPTRG00000013408) #13	ENSPTRG00000045113	ZNF341 (ENSPTRG00000013406) #14	PXMP4 (ENSPTRG00000013405) #15	E2F1 (ENSPTRG00000013404) #16	ENSPTRG00000047541 #18	C20H20orf144 (ENSPTRG00000013403)	NECAB3 (ENSPTRG00000013402) #17	CBFA2T2 (ENSPTRG00000013401) #19	SNTA1 (ENSPTRG00000013400) #21	CDK5RAP1 (ENSPTRG00000013399) #22	BPIFB1 (ENSPTRG00000013396) #24	BPIFA1 (ENSPTRG00000013395) #25	BPIFA3 (ENSPTRG00000013393) #26	ENSPTRG00000049909	BPIFA2 (ENSPTRG00000013391) #27	BPIFB4 (ENSPTRG00000013390) #28	BPIFB3 (ENSPTRG00000022778) #29	BPIFB6 (ENSPTRG00000013388) #30	BPIFB2 (ENSPTRG00000013387) #31	SUN5 (ENSPTRG00000024395) #32	EFCAB8 (ENSPTRG00000034012) #33	MAPRE1 (ENSPTRG00000013385) #34	DNMT3B (ENSPTRG00000013384) #35	COMMD7 (ENSPTRG00000013383) #37	ENSPTRG00000030589
Human	MODERN SPECIES	12	DYNLRB1 (ENSG00000125971)	ITCH (ENSG00000078747)	AHCY (ENSG00000101444) #9	ASIP (ENSG00000101440) #10	EIF2S2 (ENSG00000125977) ##11	RALY (ENSG00000125970) #12	CHMP4B (ENSG00000101421) #13	ZNF341 (ENSG00000131061) #14	PXMP4 (ENSG00000101417) #15	E2F1 (ENSG00000101412) #16	ACTL10 (ENSG00000288649) #18	C20orf144 (ENSG00000149609)	NECAB3 (ENSG00000125967) #17	CBFA2T2 (ENSG00000078699) #19	SNTA1 (ENSG00000101400) #21	CDK5RAP1 (ENSG00000101391) #22	BPIFB1 (ENSG00000125999) #24	BPIFA1 (ENSG00000198183) #25	BPIFA3 (ENSG00000131059) #26	BPIFA2 (ENSG00000131050) #27	BPIFB4 (ENSG00000186191) #28	BPIFB3 (ENSG00000186190) #29	BPIFB6 (ENSG00000167104) #30	BPIFB2 (ENSG00000078898) #31	SUN5 (ENSG00000167098) #32	EFCAB8 (ENSG00000215529) #33	MAPRE1 (ENSG00000101367) #34	DNMT3B (ENSG00000088305) #35	COMMD7 (ENSG00000149600) #37	ENSG00000285382	C20orf203 (ENSG00000198547)
Orangutan	MODERN SPECIES	11	ITCH (ENSPPYG00000010936)	AHCY (ENSPPYG00000010935) #9	ENSPPYG00000010934 #10	EIF2S2 (ENSPPYG00000010933) ##11	ENSPPYG00000010932 #12	ENSPPYG00000041388	CHMP4B (ENSPPYG00000010931) #13	ZNF341 (ENSPPYG00000010930) #14	PXMP4 (ENSPPYG00000041080) #15	E2F1 (ENSPPYG00000010929) #16	ACTL10 (ENSPPYG00000010928) #18	C20orf144 (ENSPPYG00000010927)	NECAB3 (ENSPPYG00000010926) #17	CBFA2T2 (ENSPPYG00000010925) #19	SNTA1 (ENSPPYG00000010924) #21	CDK5RAP1 (ENSPPYG00000010923) #22	BPIFB1 (ENSPPYG00000010919) #24	BPIFA1 (ENSPPYG00000010918) #25	BPIFA3 (ENSPPYG00000010917) #26	BPIFA2 (ENSPPYG00000010915) #27	ENSPPYG00000011281 #28	BPIFB3 (ENSPPYG00000011280) #29	BPIFB6 (ENSPPYG00000011279) #30	BPIFB2 (ENSPPYG00000011278) #31	SUN5 (ENSPPYG00000010914) #32	EFCAB8 (ENSPPYG00000032398) #33	ENSPPYG00000035142 ##36	MAPRE1 (ENSPPYG00000032390) #34	DNMT3B (ENSPPYG00000010911) #35	COMMD7 (ENSPPYG00000010910) #37	C20orf203 (ENSPPYG00000010909)
Gibbon	MODERN SPECIES	3	ITCH (ENSNLEG00000010045)	ENSNLEG00000030506	ENSNLEG00000010041 #9	ENSNLEG00000028939	EIF2S2 (ENSNLEG00000010034) ##11	ENSNLEG00000010031 #12	ENSNLEG00000035552	CHMP4B (ENSNLEG00000010020) #13	ZNF341 (ENSNLEG00000010013) #14	ENSNLEG00000029978 #15	E2F1 (ENSNLEG00000010009) #16	ENSNLEG00000009989 #17	C20orf144 (ENSNLEG00000010006)	CBFA2T2 (ENSNLEG00000009976) #19	SNTA1 (ENSNLEG00000009970) #21	CDK5RAP1 (ENSNLEG00000009942) #22	BPIFB1 (ENSNLEG00000009918) #24	ENSNLEG00000009915 #25	BPIFA3 (ENSNLEG00000009907) #26	ENSNLEG00000032607	BPIFA2 (ENSNLEG00000009895) #27	BPIFB4 (ENSNLEG00000009889) #28	BPIFB3 (ENSNLEG00000009874) #29	BPIFB6 (ENSNLEG00000009863) #30	BPIFB2 (ENSNLEG00000009854) #31	SUN5 (ENSNLEG00000009839) #32	MAPRE1 (ENSNLEG00000009828) #34	DNMT3B (ENSNLEG00000009819) #35	ENSNLEG00000033204 #37	ENSNLEG00000009815	ASXL1 (ENSNLEG00000009794)
Tarsier	MODERN SPECIES	4029															SNTA1 (ENSTSYG00000031328) #21	CDK5RAP1 (ENSTSYG00000013061) #22	BPIFB1 (ENSTSYG00000028664) #24	BPIFA1 (ENSTSYG00000013665) #25	BPIFA3 (ENSTSYG00000034882) #26	BPIFA2 (ENSTSYG00000036461) #27	BPIFB4 (ENSTSYG00000036167) #28	BPIFB3 (ENSTSYG00000007131) #29	BPIFB6 (ENSTSYG00000026610) #30	BPIFB2 (ENSTSYG00000030972) #31	SUN5 (ENSTSYG00000009982) #32
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j
Lemuriformes_a	ANCESTRAL SPECIES	26	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j
Greater bamboo lemur	MODERN SPECIES	98	ENSPSMG00000018498	ITCH (ENSPSMG00000018448)	AHCY (ENSPSMG00000018371) #9	ASIP (ENSPSMG00000018334) #10	EIF2S2 (ENSPSMG00000018322) #11	RALY (ENSPSMG00000018249) #12	CHMP4B (ENSPSMG00000018182) #13	ZNF341 (ENSPSMG00000018155) #14	PXMP4 (ENSPSMG00000018104) #15	E2F1 (ENSPSMG00000018083) #16	ACTL10 (ENSPSMG00000018073) #18	ENSPSMG00000018069	NECAB3 (ENSPSMG00000018052) #17	CBFA2T2 (ENSPSMG00000017990) #19	SNTA1 (ENSPSMG00000017942) #21	ENSPSMG00000017928 #22
Coquerels sifaka	MODERN SPECIES	126	ENSPCOG00000023647	AHCY (ENSPCOG00000028404) #9	ASIP (ENSPCOG00000010026) #10	ENSPCOG00000016748	ENSPCOG00000016432	EIF2S2 (ENSPCOG00000023384) #11	RALY (ENSPCOG00000016363) #12	CHMP4B (ENSPCOG00000019410) #13	ZNF341 (ENSPCOG00000023267) #14	PXMP4 (ENSPCOG00000024717) #15	E2F1 (ENSPCOG00000020987) #16	NECAB3 (ENSPCOG00000028089) #17	ENSPCOG00000016999	CBFA2T2 (ENSPCOG00000018468) #19	SNTA1 (ENSPCOG00000027507) #21	CDK5RAP1 (ENSPCOG00000024202) #22	BPIFB1 (ENSPCOG00000028115) #24	BPIFA1 (ENSPCOG00000015572) #25	BPIFA2 (ENSPCOG00000020981) #27	BPIFB4 (ENSPCOG00000014355) #28	BPIFB3 (ENSPCOG00000002263) #29	BPIFB6 (ENSPCOG00000019939) #30	BPIFB2 (ENSPCOG00000024187) #31	SUN5 (ENSPCOG00000021842) #32	EFCAB8 (ENSPCOG00000003137) #33	MAPRE1 (ENSPCOG00000011361) #34	ENSPCOG00000011905	DNMT3B (ENSPCOG00000025216) #35	ENSPCOG00000021565 #37	NOL4L (ENSPCOG00000013169)	ASXL1 (ENSPCOG00000020621)
Mouse lemur	MODERN SPECIES	9	DYNLRB1 (ENSMICG00000003253)	ITCH (ENSMICG00000003238)	ENSMICG00000034345	ENSMICG00000032740	AHCY (ENSMICG00000003232) #9	ASIP (ENSMICG00000044506) #10	ENSMICG00000006944 #11	RALY (ENSMICG00000039074) #12	ENSMICG00000042802 #13	ZNF341 (ENSMICG00000047832) #14	ENSMICG00000028174 #15	E2F1 (ENSMICG00000006921) #16	NECAB3 (ENSMICG00000006906) #17	ENSMICG00000006895 #19	SNTA1 (ENSMICG00000004936) #21	CDK5RAP1 (ENSMICG00000004382) #22	BPIFB1 (ENSMICG00000004357) #24	BPIFA1 (ENSMICG00000004348) #25	BPIFA2 (ENSMICG00000013403) #27	BPIFB4 (ENSMICG00000026403) #28	BPIFB3 (ENSMICG00000001990) #29	BPIFB6 (ENSMICG00000001984) #30	BPIFB2 (ENSMICG00000001979) #31	SUN5 (ENSMICG00000001971) #32	EFCAB8 (ENSMICG00000036641) #33	MAPRE1 (ENSMICG00000047719) #34	DNMT3B (ENSMICG00000006679) #35	COMMD7 (ENSMICG00000006672) #37	NOL4L (ENSMICG00000006651)	ASXL1 (ENSMICG00000038277)	KIF3B (ENSMICG00000015964)
Bushbaby	MODERN SPECIES	140	ENSOGAG00000016802	ITCH (ENSOGAG00000016792)	AHCY (ENSOGAG00000016787) #9	ENSOGAG00000001417 #11	RALY (ENSOGAG00000032337) #12	ENSOGAG00000013532	CHMP4B (ENSOGAG00000010444) #13	ZNF341 (ENSOGAG00000010441) #14	PXMP4 (ENSOGAG00000010440) #15	E2F1 (ENSOGAG00000024304) #16	ACTL10 (ENSOGAG00000010438) #18	NECAB3 (ENSOGAG00000028758) #17	CBFA2T2 (ENSOGAG00000015051) #19	ENSOGAG00000032821	SNTA1 (ENSOGAG00000027133) #21	CDK5RAP1 (ENSOGAG00000010764) #22	ENSOGAG00000010760 #23	ENSOGAG00000024646 ##31	BPIFB1 (ENSOGAG00000010753) #24	BPIFA1 (ENSOGAG00000010750) #25	BPIFA2 (ENSOGAG00000010742) #27	ENSOGAG00000027213	BPIFB4 (ENSOGAG00000010737) #28	BPIFB3 (ENSOGAG00000015673) #29	BPIFB6 (ENSOGAG00000015669) #30	BPIFB2 (ENSOGAG00000015664) #31	SUN5 (ENSOGAG00000015660) #32	ENSOGAG00000026557 #34	DNMT3B (ENSOGAG00000004720) #35	COMMD7 (ENSOGAG00000004718) #37	ENSOGAG00000026973
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35
Tree shrew	MODERN SPECIES	1365															SNTA1 (ENSTBEG00000006415) #21	CDK5RAP1 (ENSTBEG00000006040) #22	ENSTBEG00000005761	ENSTBEG00000005479	BPIFB1 (ENSTBEG00000003648) #24	BPIFA1 (ENSTBEG00000003115) #25	ENSTBEG00000001858	ENSTBEG00000001404	ENSTBEG00000000864
Glires	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35
Rodentia	ANCESTRAL SPECIES	18	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35
Muroidea	ANCESTRAL SPECIES	7	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00940000171996	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00940000171996	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.y.b #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928.l #35
Chinese hamster chok1gshd	MODERN SPECIES	188	Itch (ENSCGRG00001020207)	ENSCGRG00001012673 #9	a (ENSCGRG00001021768) #10	ENSCGRG00001004778	ENSCGRG00001001614 #11	Raly (ENSCGRG00001014652) #12	Chmp4b (ENSCGRG00001000652) #13	Zfp341 (ENSCGRG00001014101) #14	Pxmp4 (ENSCGRG00001010342) #15	E2f1 (ENSCGRG00001001729) #16	Necab3 (ENSCGRG00001013760) #17	Actl10 (ENSCGRG00001006945) #18	1700003F12Rik (ENSCGRG00001012971)	Cbfa2t2 (ENSCGRG00001014529) #19	Snta1 (ENSCGRG00001016422) #21	Cdk5rap1 (ENSCGRG00001020687) #22	ENSCGRG00001018519 #23	ENSCGRG00001021876 #23	Bpifb5 (ENSCGRG00001022241) ##31	Bpifb1 (ENSCGRG00001022649) #24	Bpifa5 (ENSCGRG00001018207) #25	Bpifa1 (ENSCGRG00001014265) #25	Bpifa3 (ENSCGRG00001017514) #26	Bpifa2 (ENSCGRG00001020519) #27	Bpifa6 (ENSCGRG00001023934)	Bpifb4 (ENSCGRG00001014345) #28	Bpifb3 (ENSCGRG00001020775) #29	Bpifb6 (ENSCGRG00001023599) #30	Bpifb2 (ENSCGRG00001009296) #31	Sun5 (ENSCGRG00001017538) #32	Mapre1 (ENSCGRG00001005061) #34
Golden Hamster	MODERN SPECIES	791	Pigu (ENSMAUG00000012275)	Dynlrb1 (ENSMAUG00000019405)	Itch (ENSMAUG00000001009)	ENSMAUG00000006591 #9	a (ENSMAUG00000021663) #10	ENSMAUG00000009771 #11	Raly (ENSMAUG00000005739) #12	Chmp4b (ENSMAUG00000020158) #13	Zfp341 (ENSMAUG00000011481) #14	Pxmp4 (ENSMAUG00000015504) #15	E2f1 (ENSMAUG00000000913) #16	Necab3 (ENSMAUG00000015672) #17	1700003F12Rik (ENSMAUG00000022072)	Cbfa2t2 (ENSMAUG00000001412) #19	Snta1 (ENSMAUG00000013984) #21	Cdk5rap1 (ENSMAUG00000000980) #22	Bpifb5 (ENSMAUG00000008139) ##31	Bpifb1 (ENSMAUG00000011247) #24	Bpifa5 (ENSMAUG00000012713) #25	Bpifa1 (ENSMAUG00000014646) #25	Bpifa3 (ENSMAUG00000013387) #26
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00940000171996	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33
Prairie vole	MODERN SPECIES	357	Dynlrb1 (ENSMOCG00000001553)	Itch (ENSMOCG00000015148)	ENSMOCG00000021599 #9	a (ENSMOCG00000006735) #10	Eif2s2 (ENSMOCG00000012809) #11	Raly (ENSMOCG00000009450) #12	ENSMOCG00000017228	Chmp4b (ENSMOCG00000022208) #13	Zfp341 (ENSMOCG00000004075) #14	Pxmp4 (ENSMOCG00000003745) #15	E2f1 (ENSMOCG00000012464) #16	Necab3 (ENSMOCG00000000497) #17	1700003F12Rik (ENSMOCG00000019597)	Cbfa2t2 (ENSMOCG00000015541) #19	Snta1 (ENSMOCG00000005630) #21	Cdk5rap1 (ENSMOCG00000002846) #22	Bpifb5 (ENSMOCG00000002643) ##31	Bpifb1 (ENSMOCG00000011657) #24	Bpifa5 (ENSMOCG00000015053) #25	Bpifa1 (ENSMOCG00000022067) #25	Bpifa3 (ENSMOCG00000007021) #26	Bpifa2 (ENSMOCG00000020017) #27	Bpifa6 (ENSMOCG00000013390)	Nsfl1c (ENSMOCG00000002492)	Fkbp1a (ENSMOCG00000015631)	Sdcbp2 (ENSMOCG00000018189)	Snph (ENSMOCG00000019255)	Rad21l (ENSMOCG00000001417)	Tmem74b (ENSMOCG00000012931)	Psmf1 (ENSMOCG00000017241)	Rspo4 (ENSMOCG00000008564)
Northern American deer mouse	MODERN SPECIES	17	Itch (ENSPEMG00000021623)	ENSPEMG00000024071 #9	a (ENSPEMG00000023599) #10	Eif2s2 (ENSPEMG00000023172) #11	Raly (ENSPEMG00000021466) #12	Chmp4b (ENSPEMG00000021658) #13	Zfp341 (ENSPEMG00000022506) #14	Pxmp4 (ENSPEMG00000023523) #15	E2f1 (ENSPEMG00000018049) #16	Actl10 (ENSPEMG00000026578) #18	1700003F12Rik (ENSPEMG00000031171)	Necab3 (ENSPEMG00000011260) #17	Cbfa2t2 (ENSPEMG00000023470) #19	ENSPEMG00000030394	Snta1 (ENSPEMG00000003510) #21	Cdk5rap1 (ENSPEMG00000017045) #22	ENSPEMG00000011960 #23	Bpifb5 (ENSPEMG00000007792) ##31	Bpifb1 (ENSPEMG00000018971) #24	Bpifa5 (ENSPEMG00000011773) #25	Bpifa1 (ENSPEMG00000014511) #25	Bpifa3 (ENSPEMG00000008523) #26	ENSPEMG00000028840	ENSPEMG00000027075	Bpifa2 (ENSPEMG00000015949) #27	Bpifa6 (ENSPEMG00000016037)	Bpifb4 (ENSPEMG00000008153) #28	Bpifb3 (ENSPEMG00000016514) #29	Bpifb6 (ENSPEMG00000009388) #30	Bpifb2 (ENSPEMG00000001773) #31	Sun5 (ENSPEMG00000019207) #32
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00940000171996	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00860000136314	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00860000136314	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00860000136314	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34
Mus_C	ANCESTRAL SPECIES		ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00860000136314	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a.d #25	ENSGT01100000263546.d.b.a.a.a.a.c #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928.k #35
Steppe mouse	MODERN SPECIES	27	a (ENSMSIG00000001870) #10	Eif2s2 (ENSMSIG00000001803) #11	Raly (ENSMSIG00000001654) #12	ENSMSIG00000001612	Chmp4b (ENSMSIG00000001595) #13	Zfp341 (ENSMSIG00000001480) #14	ENSMSIG00000001473	Pxmp4 (ENSMSIG00000001438) #15	E2f1 (ENSMSIG00000001395) #16	Actl10 (ENSMSIG00000001387) #18	1700003F12Rik (ENSMSIG00000001368)	Necab3 (ENSMSIG00000001205) #17	Cbfa2t2 (ENSMSIG00000001148) #19	ENSMSIG00000001135	Snta1 (ENSMSIG00000001125) #21	Cdk5rap1 (ENSMSIG00000001010) #22
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0025444 #9	Eif2s2 (MGP_SPRETEiJ_G0025443) #11	a (MGP_SPRETEiJ_G0025442) #10	Raly (MGP_SPRETEiJ_G0025441) #12	MGP_SPRETEiJ_G0025440	Chmp4b (MGP_SPRETEiJ_G0025439) #13	MGP_SPRETEiJ_G0025438	MGP_SPRETEiJ_G0025437	Pxmp4 (MGP_SPRETEiJ_G0025436) #15	E2f1 (MGP_SPRETEiJ_G0025435) #16	Actl10 (MGP_SPRETEiJ_G0025434) #18	1700003F12Rik (MGP_SPRETEiJ_G0025433)	Necab3 (MGP_SPRETEiJ_G0025432) #17	Cbfa2t2 (MGP_SPRETEiJ_G0025431) #19	Snta1 (MGP_SPRETEiJ_G0025430) #21	Cdk5rap1 (MGP_SPRETEiJ_G0025429) #22	MGP_SPRETEiJ_G0025428 #23	MGP_SPRETEiJ_G0025427 #23	Bpifb5 (MGP_SPRETEiJ_G0025426) ##31	Bpifb1 (MGP_SPRETEiJ_G0025425) #24	Bpifa5 (MGP_SPRETEiJ_G0025424) #25	Bpifa1 (MGP_SPRETEiJ_G0025423) #25	Bpifa3 (MGP_SPRETEiJ_G0025422) #26	Bpifa2 (MGP_SPRETEiJ_G0025421) #27	Bpifa6 (MGP_SPRETEiJ_G0025420)	MGP_SPRETEiJ_G0025419 #28	Bpifb3 (MGP_SPRETEiJ_G0025418) #29	Bpifb6 (MGP_SPRETEiJ_G0025417) #30	Bpifb2 (MGP_SPRETEiJ_G0025416) #31	Sun5 (MGP_SPRETEiJ_G0025415) #32	Mapre1 (MGP_SPRETEiJ_G0025413) #34
Mouse	MODERN SPECIES	11	Dynlrb1 (ENSMUSG00000047459)	Itch (ENSMUSG00000027598)	Ahcy (ENSMUSG00000027597) #9	Eif2s2 (ENSMUSG00000074656) #11	a (ENSMUSG00000027596) #10	Raly (ENSMUSG00000027593) #12	Chmp4b (ENSMUSG00000038467) #13	Zfp341 (ENSMUSG00000059842) #14	Pxmp4 (ENSMUSG00000000876) #15	E2f1 (ENSMUSG00000027490) #16	Actl10 (ENSMUSG00000078129) #18	1700003F12Rik (ENSMUSG00000038523)	Necab3 (ENSMUSG00000027489) #17	Cbfa2t2 (ENSMUSG00000038533) #19	Snta1 (ENSMUSG00000027488) #21	Cdk5rap1 (ENSMUSG00000027487) #22	Bpifb9b (ENSMUSG00000067996) #23	Bpifb9a (ENSMUSG00000067998) #23	Bpifb5 (ENSMUSG00000038572) ##31	Bpifb1 (ENSMUSG00000027485) #24	Bpifa5 (ENSMUSG00000027484) #25	Bpifa1 (ENSMUSG00000027483) #25	Bpifa3 (ENSMUSG00000027482) #26	Bpifa2 (ENSMUSG00000042459) #27	Bpifa6 (ENSMUSG00000078998)	Bpifb4 (ENSMUSG00000074665) #28	Bpifb3 (ENSMUSG00000068008) #29	Bpifb6 (ENSMUSG00000068009) #30	Bpifb2 (ENSMUSG00000027481) #31	Sun5 (ENSMUSG00000027480) #32	Efcab8 (ENSMUSG00000044083) #33
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0024522 #9	Eif2s2 (MGP_CAROLIEiJ_G0024521) #11	a (MGP_CAROLIEiJ_G0024520) #10	Raly (MGP_CAROLIEiJ_G0024519) #12	MGP_CAROLIEiJ_G0024518	Chmp4b (MGP_CAROLIEiJ_G0024517) #13	Zfp341 (MGP_CAROLIEiJ_G0024516) #14	MGP_CAROLIEiJ_G0024515	Pxmp4 (MGP_CAROLIEiJ_G0024514) #15	E2f1 (MGP_CAROLIEiJ_G0024513) #16	Actl10 (MGP_CAROLIEiJ_G0024512) #18	1700003F12Rik (MGP_CAROLIEiJ_G0024511)	Necab3 (MGP_CAROLIEiJ_G0024510) #17	Cbfa2t2 (MGP_CAROLIEiJ_G0024509) #19	Snta1 (MGP_CAROLIEiJ_G0024508) #21	MGP_CAROLIEiJ_G0024507 #22	Bpifb5 (MGP_CAROLIEiJ_G0024505) ##31	Bpifb1 (MGP_CAROLIEiJ_G0024504) #24	Bpifa5 (MGP_CAROLIEiJ_G0024503) #25	Bpifa1 (MGP_CAROLIEiJ_G0024502) #25	Bpifa3 (MGP_CAROLIEiJ_G0024501) #26	Bpifa2 (MGP_CAROLIEiJ_G0024500) #27	Bpifa6 (MGP_CAROLIEiJ_G0024499)	MGP_CAROLIEiJ_G0024498 #28	Bpifb3 (MGP_CAROLIEiJ_G0024497) #29	MGP_CAROLIEiJ_G0024496 #30	Bpifb2 (MGP_CAROLIEiJ_G0024495) #31	Sun5 (MGP_CAROLIEiJ_G0024494) #32	MGP_CAROLIEiJ_G0024493 #33	Mapre1 (MGP_CAROLIEiJ_G0024492) #34	Dnmt3b (MGP_CAROLIEiJ_G0024491) #35
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0025966	Eif2s2 (MGP_PahariEiJ_G0025965) #11	a (MGP_PahariEiJ_G0025964) #10	Raly (MGP_PahariEiJ_G0025963) #12	MGP_PahariEiJ_G0025962	Chmp4b (MGP_PahariEiJ_G0025961) #13	Zfp341 (MGP_PahariEiJ_G0025960) #14	MGP_PahariEiJ_G0025959	Pxmp4 (MGP_PahariEiJ_G0025958) #15	E2f1 (MGP_PahariEiJ_G0025957) #16	Actl10 (MGP_PahariEiJ_G0025956) #18	1700003F12Rik (MGP_PahariEiJ_G0025955)	Necab3 (MGP_PahariEiJ_G0025954) #17	Cbfa2t2 (MGP_PahariEiJ_G0025953) #19	Snta1 (MGP_PahariEiJ_G0025952) #21	Cdk5rap1 (MGP_PahariEiJ_G0025951) #22	Bpifb5 (MGP_PahariEiJ_G0025949) ##31	Bpifb1 (MGP_PahariEiJ_G0025948) #24	Bpifa5 (MGP_PahariEiJ_G0025947) #25	Bpifa1 (MGP_PahariEiJ_G0025946) #25	Bpifa3 (MGP_PahariEiJ_G0025945) #26	MGP_PahariEiJ_G0025944	MGP_PahariEiJ_G0025943 #27	Bpifa6 (MGP_PahariEiJ_G0025942)	MGP_PahariEiJ_G0025941 #28	Bpifb3 (MGP_PahariEiJ_G0025940) #29	Bpifb6 (MGP_PahariEiJ_G0025939) #30	Bpifb2 (MGP_PahariEiJ_G0025938) #31	Sun5 (MGP_PahariEiJ_G0025937) #32	MGP_PahariEiJ_G0025936 #33	Mapre1 (MGP_PahariEiJ_G0025935) #34
Rat	MODERN SPECIES	13	Eif2s2 (ENSRNOG00000017447) #11	Raly (ENSRNOG00000017405) #12	LOC690597 (ENSRNOG00000055182)	Chmp4b (ENSRNOG00000046585) #13	AABR07054368.1 (ENSRNOG00000029996)	ENSRNOG00000063087	Zfp341 (ENSRNOG00000017086) #14	Pxmp4 (ENSRNOG00000016975) #15	Actl10 (ENSRNOG00000036864) #18	RGD1561517 (ENSRNOG00000016583)	E2f1 (ENSRNOG00000016708) #16	AABR07054362.1 (ENSRNOG00000050899)	Sms-ps2 (ENSRNOG00000031275)	Cbfa2t2 (ENSRNOG00000016352) #19	Snta1 (ENSRNOG00000016062) #21	ENSRNOG00000064935 #22	LOC690507 (ENSRNOG00000015637) #23	Bpifb5 (ENSRNOG00000025238) ##31	Bpifb1 (ENSRNOG00000015468) #24	Bpifa5 (ENSRNOG00000013908) #25	Bpifa1 (ENSRNOG00000013859) #25	Bpifa3 (ENSRNOG00000013778) #26	Bpifa2f (ENSRNOG00000036870)	Bpifa2 (ENSRNOG00000013540) #27	Bpifa6 (ENSRNOG00000043258)	Bpifb3 (ENSRNOG00000034174) #28	Bpifb6 (ENSRNOG00000013371) #30	Bpifb2 (ENSRNOG00000012197) #31	Sun5 (ENSRNOG00000027221) #32	Efcab8 (ENSRNOG00000070431) #33	Mapre1 (ENSRNOG00000011798) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1287															Snta1 (ENSNGAG00000014553) #21	Cdk5rap1 (ENSNGAG00000016976) #22
Kangaroo rat	MODERN SPECIES	332	Pigu (ENSDORG00000001715)	ENSDORG00000029351	Dynlrb1 (ENSDORG00000028607)	Itch (ENSDORG00000027257)	ENSDORG00000012590 #9	a (ENSDORG00000013768) #10	Eif2s2 (ENSDORG00000001920) #11	Raly (ENSDORG00000013400) #12	Chmp4b (ENSDORG00000011539) #13	Zfp341 (ENSDORG00000000005) #14	Pxmp4 (ENSDORG00000030129) #15	E2f1 (ENSDORG00000013793) #16	Necab3 (ENSDORG00000013792) #17	Cbfa2t2 (ENSDORG00000001656) #19	Snta1 (ENSDORG00000029237) #21	Cdk5rap1 (ENSDORG00000004622) #22	Bpifb5 (ENSDORG00000028380) ##31	Bpifb1 (ENSDORG00000002282) #24	ENSDORG00000002276 #25	Bpifa3 (ENSDORG00000002275) #26	Bpifb4 (ENSDORG00000001190) #28	Bpifb3 (ENSDORG00000029748) #29	Bpifb6 (ENSDORG00000004324) #30	Bpifb2 (ENSDORG00000004323) #31	Mapre1 (ENSDORG00000023413) #34	ENSDORG00000012834 #35	Commd7 (ENSDORG00000002116) #37	Nol4l (ENSDORG00000027893)	ENSDORG00000028887	ENSDORG00000016544	Pofut1 (ENSDORG00000003323)
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00900000143329
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j	ENSGT00390000015634
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j	ENSGT00390000015634
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00490000043329.a.a.a.i.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j	ENSGT00390000015634
Long-tailed chinchilla	MODERN SPECIES	129	DYNLRB1 (ENSCLAG00000016878)	ITCH (ENSCLAG00000016997)	AHCY (ENSCLAG00000017278) #9	ASIP (ENSCLAG00000017188) #10	ENSCLAG00000017263 #11	RALY (ENSCLAG00000016899) #12	CHMP4B (ENSCLAG00000017205) #13	ZNF341 (ENSCLAG00000016902) #14	PXMP4 (ENSCLAG00000017245) #15	E2F1 (ENSCLAG00000017077) #16	NECAB3 (ENSCLAG00000017054) #17	ACTL10 (ENSCLAG00000018112) #18	ENSCLAG00000017072	CBFA2T2 (ENSCLAG00000017277) #19	SNTA1 (ENSCLAG00000015283) #21	CDK5RAP1 (ENSCLAG00000015460) #22	BPIFB1 (ENSCLAG00000016830) #24	BPIFA1 (ENSCLAG00000017206) #25	BPIFA3 (ENSCLAG00000016843) #26	BPIFB4 (ENSCLAG00000016722) #28	BPIFB3 (ENSCLAG00000016914) #29	BPIFB6 (ENSCLAG00000016956) #30	BPIFB2 (ENSCLAG00000017195) #31	SUN5 (ENSCLAG00000017254) #32	ENSCLAG00000017109 #34	DNMT3B (ENSCLAG00000017043) #35	COMMD7 (ENSCLAG00000017227) #37	NOL4L (ENSCLAG00000017265)	ASXL1 (ENSCLAG00000017264)	KIF3B (ENSCLAG00000016984)	POFUT1 (ENSCLAG00000017267)
Degu	MODERN SPECIES	78	ENSODEG00000020169	ENSODEG00000015189	ENSODEG00000012943	ENSODEG00000012151 #11	ENSODEG00000012831 #12	ENSODEG00000012366 #13	ZNF341 (ENSODEG00000013884) #14	PXMP4 (ENSODEG00000015173) #15	E2F1 (ENSODEG00000012327) #16	ENSODEG00000013210	NECAB3 (ENSODEG00000012739) #17	ENSODEG00000013862	CBFA2T2 (ENSODEG00000012562) #19	ENSODEG00000019960	SNTA1 (ENSODEG00000012817) #21	CDK5RAP1 (ENSODEG00000013190) #22	BPIFB1 (ENSODEG00000012392) #24	BPIFA1 (ENSODEG00000011803) #25	BPIFA3 (ENSODEG00000011797) #26	ENSODEG00000013174	ENSODEG00000012886	ENSODEG00000012670	BPIFB4 (ENSODEG00000013037) #28	BPIFB3 (ENSODEG00000012502) #29	BPIFB6 (ENSODEG00000011706) #30	BPIFB2 (ENSODEG00000012498) #31	SUN5 (ENSODEG00000012284) #32	ENSODEG00000012036 #34	DNMT3B (ENSODEG00000011753) #35	COMMD7 (ENSODEG00000014983) #37	NOL4L (ENSODEG00000012307)
Guinea pig	MODERN SPECIES	45	PIGU (ENSCPOG00000013806)	DYNLRB1 (ENSCPOG00000013798)	ITCH (ENSCPOG00000013787)	AHCY (ENSCPOG00000014740) #9	ASIP (ENSCPOG00000005139) #10	EIF2S2 (ENSCPOG00000040226) #11	RALY (ENSCPOG00000000309) #12	CHMP4B (ENSCPOG00000035794) #13	ZNF341 (ENSCPOG00000003820) #14	PXMP4 (ENSCPOG00000024804) #15	E2F1 (ENSCPOG00000001800) #16	ENSCPOG00000022109 #18	NECAB3 (ENSCPOG00000020859) #17	CBFA2T2 (ENSCPOG00000001721) #19	SNTA1 (ENSCPOG00000005179) #21	CDK5RAP1 (ENSCPOG00000006663) #22	BPIFB1 (ENSCPOG00000005568) #24	BPIFA1 (ENSCPOG00000014220) #25	ENSCPOG00000013128 #26
Naked mole-rat female	MODERN SPECIES	6	AHCY (ENSHGLG00000009751) #9	ENSHGLG00000031940 #10	RALY (ENSHGLG00000017779) #12	ENSHGLG00000042490	ENSHGLG00000032344	ENSHGLG00000041357 #13	ZNF341 (ENSHGLG00000013786) #14	PXMP4 (ENSHGLG00000016991) #15	ENSHGLG00000041428	E2F1 (ENSHGLG00000009301) #16	ENSHGLG00000009659 #17	CBFA2T2 (ENSHGLG00000018266) #19	ENSHGLG00000047164	ENSHGLG00000018147	SNTA1 (ENSHGLG00000006583) #21	CDK5RAP1 (ENSHGLG00000005146) #22	ENSHGLG00000039669 #23
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.l #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00900000143329
Marmotini	ANCESTRAL SPECIES	5	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.l #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00900000143329
Marmotini_b	ANCESTRAL SPECIES	29	ENSGT00390000011067.A.o.b	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24
Arctic ground squirrel	MODERN SPECIES	24	DYNLRB1 (ENSUPAG00010004657)	ITCH (ENSUPAG00010004671)	AHCY (ENSUPAG00010004706) #9	ASIP (ENSUPAG00010004712) #10	EIF2S2 (ENSUPAG00010004723) #11	RALY (ENSUPAG00010004731) #12	CHMP4B (ENSUPAG00010004793) #13	ZNF341 (ENSUPAG00010004795) #14	PXMP4 (ENSUPAG00010004822) #15	E2F1 (ENSUPAG00010004824) #16	NECAB3 (ENSUPAG00010004839) #17	ACTL10 (ENSUPAG00010004872) #18	C20orf144 (ENSUPAG00010004879)	CBFA2T2 (ENSUPAG00010004884) #19	SNTA1 (ENSUPAG00010004904) #21	CDK5RAP1 (ENSUPAG00010004922) #22	ENSUPAG00010004995 #23	ENSUPAG00010004998 ##31	ENSUPAG00010005007 #24
Squirrel	MODERN SPECIES	161	MAP1LC3A (ENSSTOG00000006158)	ENSSTOG00000014820	ITCH (ENSSTOG00000014804)	AHCY (ENSSTOG00000003013) #9	ASIP (ENSSTOG00000003501) #10	EIF2S2 (ENSSTOG00000008821) #11	RALY (ENSSTOG00000008810) #12	CHMP4B (ENSSTOG00000005242) #13	ZNF341 (ENSSTOG00000002753) #14	PXMP4 (ENSSTOG00000002748) #15	E2F1 (ENSSTOG00000002735) #16	NECAB3 (ENSSTOG00000028643) #17	ACTL10 (ENSSTOG00000000902) #18	CBFA2T2 (ENSSTOG00000003478) #19	SNTA1 (ENSSTOG00000020522) #21	CDK5RAP1 (ENSSTOG00000005492) #22
Alpin marmot	MODERN SPECIES		DYNLRB1 (ENSMMMG00000023395)	ITCH (ENSMMMG00000023404)	ENSMMMG00000023413	AHCY (ENSMMMG00000023416) #9	ASIP (ENSMMMG00000023418) #10	EIF2S2 (ENSMMMG00000023422) #11	RALY (ENSMMMG00000023423) #12	CHMP4B (ENSMMMG00000023441) #13	ZNF341 (ENSMMMG00000023444) #14	PXMP4 (ENSMMMG00000023451) #15	E2F1 (ENSMMMG00000023454) #16	NECAB3 (ENSMMMG00000023457) #17	ACTL10 (ENSMMMG00000023461) #18	CBFA2T2 (ENSMMMG00000023462) #19	SNTA1 (ENSMMMG00000023469) #21	CDK5RAP1 (ENSMMMG00000023644) #22	ENSMMMG00000023646 ##31	BPIFB1 (ENSMMMG00000023647) #24	BPIFA1 (ENSMMMG00000023653) #25	BPIFA3 (ENSMMMG00000023655) #26	ENSMMMG00000023661	ENSMMMG00000023662	BPIFB4 (ENSMMMG00000023664) #28	BPIFB3 (ENSMMMG00000023666) #29	BPIFB6 (ENSMMMG00000023672) #30	BPIFB2 (ENSMMMG00000023676) #31	SUN5 (ENSMMMG00000023678) #32	EFCAB8 (ENSMMMG00000023682) #33	ENSMMMG00000023683 #34	DNMT3B (ENSMMMG00000023686) #35	COMMD7 (ENSMMMG00000023701) #37
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005003145	ENSSVLG00005003129	EIF2S2 (ENSSVLG00005003099) #11	ENSSVLG00005003066 #12	CHMP4B (ENSSVLG00005003046) #13	ENSSVLG00005003036	ZNF341 (ENSSVLG00005003010) #14	PXMP4 (ENSSVLG00005002986) #15	E2F1 (ENSSVLG00005002971) #16	ACTL10 (ENSSVLG00005002962) #18	ENSSVLG00005002949	NECAB3 (ENSSVLG00005002907) #17	ENSSVLG00005002886	CBFA2T2 (ENSSVLG00005002847) #19	SNTA1 (ENSSVLG00005002824) #21	CDK5RAP1 (ENSSVLG00005002783) #22	ENSSVLG00005002725	BPIFB1 (ENSSVLG00005002680) #24	BPIFA1 (ENSSVLG00005002640) #25	BPIFA3 (ENSSVLG00005002605) #26	BPIFB4 (ENSSVLG00005002569) #28	BPIFB3 (ENSSVLG00005002532) #29	BPIFB6 (ENSSVLG00005002490) #30	BPIFB2 (ENSSVLG00005002451) #31	SUN5 (ENSSVLG00005002374) #32	ENSSVLG00005002338	ENSSVLG00005002322 #34	ENSSVLG00005002127 #35	COMMD7 (ENSSVLG00005002025) #37	NOL4L (ENSSVLG00005001985)	ASXL1 (ENSSVLG00005001929)
Lagomorpha	ANCESTRAL SPECIES	33	ENSGT00390000014941	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000167211	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729
Rabbit	MODERN SPECIES	15	PIGU (ENSOCUG00000009627)	ENSOCUG00000021027	ITCH (ENSOCUG00000015354)	ENSOCUG00000008592 #9	ENSOCUG00000036618	asip (ENSOCUG00000011138) #10	ENSOCUG00000038624	EIF2S2 (ENSOCUG00000000481) #11	RALY (ENSOCUG00000000477) #12	ZNF341 (ENSOCUG00000024028) #14	PXMP4 (ENSOCUG00000005415) #15	NECAB3 (ENSOCUG00000000850) #17	ENSOCUG00000000854 #18	CBFA2T2 (ENSOCUG00000000849) #19	SNTA1 (ENSOCUG00000011916) #21	CDK5RAP1 (ENSOCUG00000017069) #22	ENSOCUG00000017051 #24	BPIFA1 (ENSOCUG00000007538) #25	ENSOCUG00000015717 #26	BPIFB3 (ENSOCUG00000014883) #29	BPIFB6 (ENSOCUG00000006815) #30	BPIFB2 (ENSOCUG00000027554) #31	SUN5 (ENSOCUG00000022223) #32	ENSOCUG00000035490	MAPRE1 (ENSOCUG00000024265) #34	DNMT3B (ENSOCUG00000017835) #35	ENSOCUG00000014339 #37	NOL4L (ENSOCUG00000010835)	ASXL1 (ENSOCUG00000035849)	KIF3B (ENSOCUG00000021741)	ENSOCUG00000025799
Pika	MODERN SPECIES	4588															SNTA1 (ENSOPRG00000006874) #21	CDK5RAP1 (ENSOPRG00000006858) #22	ENSOPRG00000006855	ENSOPRG00000006842	BPIFB1 (ENSOPRG00000006828) #24	BPIFA1 (ENSOPRG00000006812) #25	BPIFA3 (ENSOPRG00000006798) #26	ENSOPRG00000006785	ENSOPRG00000006766	BPIFB4 (ENSOPRG00000006756) #28	BPIFB3 (ENSOPRG00000006748) #29	BPIFB2 (ENSOPRG00000006729) #31	SUN5 (ENSOPRG00000006713) #32	ENSOPRG00000018610	MAPRE1 (ENSOPRG00000006707) #34	DNMT3B (ENSOPRG00000006680) #35	COMMD7 (ENSOPRG00000006669) #37
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00940000163617 #33
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.a #34
Suina	ANCESTRAL SPECIES	9	ENSGT00390000014941	ENSGT00940000158853	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Pig	MODERN SPECIES	8	ITCH (ENSSSCG00000007280)	AHCY (ENSSSCG00000007278) #9	ASIP (ENSSSCG00000053652) #10	EIF2S2 (ENSSSCG00000026617) #11	RALY (ENSSSCG00000007275) #12	CHMP4B (ENSSSCG00000007272) #13	ZNF341 (ENSSSCG00000021769) #14	ENSSSCG00000034625 #15	E2F1 (ENSSSCG00000007268) #16	ACTL10 (ENSSSCG00000044750) #18	ENSSSCG00000047940	NECAB3 (ENSSSCG00000029626) #17	CBFA2T2 (ENSSSCG00000027410) #19	ENSSSCG00000034263	SNTA1 (ENSSSCG00000063004) #21	CDK5RAP1 (ENSSSCG00000007264) #22	ENSSSCG00000007263 #23	ENSSSCG00000007262 ##31	BPIFB1 (ENSSSCG00000007261) #24	BPIFA1 (ENSSSCG00000007260) #25	BPIFA3 (ENSSSCG00000024787) #26	BPIFA2 (ENSSSCG00000007259) #27	BPIFB4 (ENSSSCG00000029295) #28	BPIFB3 (ENSSSCG00000026137) #29	BPIFB6 (ENSSSCG00000025052) #30	BPIFB2 (ENSSSCG00000029714) #31	SUN5 (ENSSSCG00000007256) #32	ENSSSCG00000059506	MAPRE1 (ENSSSCG00000007253) #34	DNMT3B (ENSSSCG00000007252) #35	COMMD7 (ENSSSCG00000055487) #37
Chacoan peccary	MODERN SPECIES	801	DYNLRB1 (ENSCWAG00000006128)	ITCH (ENSCWAG00000006169)	AHCY (ENSCWAG00000006316) #9	ASIP (ENSCWAG00000006347) #10	EIF2S2 (ENSCWAG00000006369) #11	RALY (ENSCWAG00000006424) #12	ENSCWAG00000006485 #13	ZNF341 (ENSCWAG00000006507) #14	PXMP4 (ENSCWAG00000006623) #15	E2F1 (ENSCWAG00000006652) #16	NECAB3 (ENSCWAG00000006683) #17	ACTL10 (ENSCWAG00000006716) #18	ENSCWAG00000006723	CBFA2T2 (ENSCWAG00000006761) #19	SNTA1 (ENSCWAG00000006848) #21	CDK5RAP1 (ENSCWAG00000006898) #22	ENSCWAG00000006962 #23	ENSCWAG00000007007	BPIFB1 (ENSCWAG00000007056) #24	BPIFA1 (ENSCWAG00000007132) #25	ENSCWAG00000007185 #26	BPIFA2 (ENSCWAG00000007236) #27	BPIFB4 (ENSCWAG00000007278) #28	BPIFB3 (ENSCWAG00000007348) #29	BPIFB6 (ENSCWAG00000007416) #30	BPIFB2 (ENSCWAG00000007471) #31	SUN5 (ENSCWAG00000007557) #32	ENSCWAG00000007672	MAPRE1 (ENSCWAG00000007693) #34	DNMT3B (ENSCWAG00000007767) #35	COMMD7 (ENSCWAG00000008773) #37
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.a #34
Camelidae	ANCESTRAL SPECIES	10	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601.h #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000167979	ENSGT00940000167211	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.a #34
Arabian camel	MODERN SPECIES	10	DYNLRB1 (ENSCDRG00005012749)	ITCH (ENSCDRG00005012516)	AHCY (ENSCDRG00005012422) #9	ASIP (ENSCDRG00005012368) #10	EIF2S2 (ENSCDRG00005012288) #11	ENSCDRG00005012122 #12	ENSCDRG00005012091	CHMP4B (ENSCDRG00005012040) #13	ZNF341 (ENSCDRG00005011605) #14	PXMP4 (ENSCDRG00005011563) #15	ACTL10 (ENSCDRG00005011389) #18	C20orf144 (ENSCDRG00005011343)	NECAB3 (ENSCDRG00005011220) #17	CBFA2T2 (ENSCDRG00005011021) #19	SNTA1 (ENSCDRG00005010910) #21	CDK5RAP1 (ENSCDRG00005010755) #22	ENSCDRG00005010639 ##31	ENSCDRG00005010439 #24	BPIFA1 (ENSCDRG00005010253) #25	BPIFA3 (ENSCDRG00005010065) #26	ENSCDRG00005009985 #27	BPIFB4 (ENSCDRG00005009777) #28	BPIFB3 (ENSCDRG00005009566) #29	BPIFB6 (ENSCDRG00005009313) #30	BPIFB2 (ENSCDRG00005009158) #31	SUN5 (ENSCDRG00005008823) #32	EFCAB8 (ENSCDRG00005019793) #33	MAPRE1 (ENSCDRG00005019775) #34	DNMT3B (ENSCDRG00005017779) #35	COMMD7 (ENSCDRG00005017575) #37	ENSCDRG00005017548
Alpaca	MODERN SPECIES	236																CDK5RAP1 (ENSVPAG00000009690) #22	ENSVPAG00000009689	ENSVPAG00000009688	ENSVPAG00000009687
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259
Cetacea	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT00490000043329.a.a.a.pb #34	ENSGT01100000263546.e.a.b #29	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j	ENSGT00390000015634
Dolphin	MODERN SPECIES	278															SNTA1 (ENSTTRG00000010869) #21	CDK5RAP1 (ENSTTRG00000010868) #22	ENSTTRG00000010866	BPIFB1 (ENSTTRG00000010865) #24	BPIFA1 (ENSTTRG00000010864) #25	BPIFA3 (ENSTTRG00000010863) #26	ENSTTRG00000010861 #27
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j	ENSGT00390000015634	ENSGT00940000160566
Monodontidae	DUPLICATION
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361.a #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.e.a.a.a.b #28	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j	ENSGT00390000015634	ENSGT00940000160566
Narwhal	MODERN SPECIES	299	MAP1LC3A (ENSMMNG00015001604)	DYNLRB1 (ENSMMNG00015001633)	ITCH (ENSMMNG00015001660)	AHCY (ENSMMNG00015001713) #9	ENSMMNG00015001751 #10	EIF2S2 (ENSMMNG00015001772) #11	RALY (ENSMMNG00015001794) #12	ENSMMNG00015001817 #13	ZNF341 (ENSMMNG00015001854) #14	PXMP4 (ENSMMNG00015001891) #15	E2F1 (ENSMMNG00015001904) #16	NECAB3 (ENSMMNG00015001933) #17	ENSMMNG00015001984	CBFA2T2 (ENSMMNG00015002029) #19	SNTA1 (ENSMMNG00015002113) #21	CDK5RAP1 (ENSMMNG00015002156) #22	BPIFB1 (ENSMMNG00015002195) #24	BPIFA1 (ENSMMNG00015002245) #25	BPIFA3 (ENSMMNG00015002319) #26	BPIFB4 (ENSMMNG00015002370) #28	SUN5 (ENSMMNG00015002432) #32	ENSMMNG00015002504	ENSMMNG00015002532 #34	DNMT3B (ENSMMNG00015002780) #35	COMMD7 (ENSMMNG00015003283) #37	NOL4L (ENSMMNG00015003321)	ASXL1 (ENSMMNG00015003413)	KIF3B (ENSMMNG00015003500)	POFUT1 (ENSMMNG00015003526)	PLAGL2 (ENSMMNG00015003544)	ENSMMNG00015003559
Beluga whale	MODERN SPECIES	36	ITCH (ENSDLEG00000018226)	AHCY (ENSDLEG00000018252) #9	ASIP (ENSDLEG00000018261) #10	EIF2S2 (ENSDLEG00000018274) #11	RALY (ENSDLEG00000018282) #12	CHMP4B (ENSDLEG00000018298) #13	ZNF341 (ENSDLEG00000018304) #14	PXMP4 (ENSDLEG00000018317) #15	E2F1 (ENSDLEG00000018330) #16	NECAB3 (ENSDLEG00000018392) #17	ACTL10 (ENSDLEG00000018420) #18	ENSDLEG00000018425	CBFA2T2 (ENSDLEG00000018440) #19	SNTA1 (ENSDLEG00000018449) #21	ENSDLEG00000018457 #22	ENSDLEG00000018464 #22	ENSDLEG00000018481 #24	BPIFA1 (ENSDLEG00000018496) #25	BPIFA3 (ENSDLEG00000018509) #26	BPIFB4 (ENSDLEG00000018531) #28	ENSDLEG00000018557 #34	DNMT3B (ENSDLEG00000018581) #35	COMMD7 (ENSDLEG00000018629) #37	NOL4L (ENSDLEG00000018639)	ASXL1 (ENSDLEG00000018668)	KIF3B (ENSDLEG00000018749)	POFUT1 (ENSDLEG00000018766)	PLAGL2 (ENSDLEG00000018773)	ENSDLEG00000018777	TM9SF4 (ENSDLEG00000012994)	ENSDLEG00000013016
Monodontidae	ANCESTRAL SPECIES																	ENSGT00940000160361.b #22
Beluga whale	MODERN SPECIES	36	DYNLRB1 (ENSDLEG00000018207)	ITCH (ENSDLEG00000018226)	AHCY (ENSDLEG00000018252) #9	ASIP (ENSDLEG00000018261) #10	EIF2S2 (ENSDLEG00000018274) #11	RALY (ENSDLEG00000018282) #12	CHMP4B (ENSDLEG00000018298) #13	ZNF341 (ENSDLEG00000018304) #14	PXMP4 (ENSDLEG00000018317) #15	E2F1 (ENSDLEG00000018330) #16	NECAB3 (ENSDLEG00000018392) #17	ACTL10 (ENSDLEG00000018420) #18	ENSDLEG00000018425	CBFA2T2 (ENSDLEG00000018440) #19	SNTA1 (ENSDLEG00000018449) #21	ENSDLEG00000018457 #22	ENSDLEG00000018464 #22	ENSDLEG00000018481 #24	BPIFA1 (ENSDLEG00000018496) #25	BPIFA3 (ENSDLEG00000018509) #26	BPIFB4 (ENSDLEG00000018531) #28	ENSDLEG00000018557 #34	DNMT3B (ENSDLEG00000018581) #35	COMMD7 (ENSDLEG00000018629) #37	NOL4L (ENSDLEG00000018639)	ASXL1 (ENSDLEG00000018668)	KIF3B (ENSDLEG00000018749)	POFUT1 (ENSDLEG00000018766)	PLAGL2 (ENSDLEG00000018773)	ENSDLEG00000018777	TM9SF4 (ENSDLEG00000012994)
Vaquita	MODERN SPECIES	6	PIGU (ENSPSNG00000012993)	MAP1LC3A (ENSPSNG00000013092)	ITCH (ENSPSNG00000013334)	ENSPSNG00000014022 #9	ASIP (ENSPSNG00000014123) #10	EIF2S2 (ENSPSNG00000014204) #11	RALY (ENSPSNG00000014290) #12	CHMP4B (ENSPSNG00000014408) #13	ZNF341 (ENSPSNG00000014477) #14	PXMP4 (ENSPSNG00000014910) #15	E2F1 (ENSPSNG00000014974) #16	NECAB3 (ENSPSNG00000015043) #17	ENSPSNG00000015208	CBFA2T2 (ENSPSNG00000015283) #19	SNTA1 (ENSPSNG00000015499) #21	CDK5RAP1 (ENSPSNG00000004778) #22	BPIFB1 (ENSPSNG00000004841) #24	BPIFA1 (ENSPSNG00000004902) #25	BPIFA3 (ENSPSNG00000004966) #26	SUN5 (ENSPSNG00000005025) #32	ENSPSNG00000005099	MAPRE1 (ENSPSNG00000005125) #34	DNMT3B (ENSPSNG00000005285) #35	COMMD7 (ENSPSNG00000005578) #37	NOL4L (ENSPSNG00000005632)	ASXL1 (ENSPSNG00000005728)	KIF3B (ENSPSNG00000005861)	POFUT1 (ENSPSNG00000005902)	PLAGL2 (ENSPSNG00000005936)	ENSPSNG00000005961	TM9SF4 (ENSPSNG00000006014)
Sperm whale	MODERN SPECIES	5	GGT7 (ENSPCTG00005008516)	NCOA6 (ENSPCTG00005008566)	TP53INP2 (ENSPCTG00005008663)	PIGU (ENSPCTG00005008727)	ENSPCTG00005009176	MAP1LC3A (ENSPCTG00005009227)	ENSPCTG00005009300 #9	ENSPCTG00005009432	ITCH (ENSPCTG00005009484)	EIF2S2 (ENSPCTG00005009850) #11	RALY (ENSPCTG00005009899) #12	CHMP4B (ENSPCTG00005009997) #13	ZNF341 (ENSPCTG00005010042) #14	ENSPCTG00005010096 #19	SNTA1 (ENSPCTG00005010299) #21	CDK5RAP1 (ENSPCTG00005010350) #22	BPIFA1 (ENSPCTG00005010475) #25	BPIFA3 (ENSPCTG00005010684) #26	BPIFB3 (ENSPCTG00005010805) #29	SUN5 (ENSPCTG00005011002) #32	ENSPCTG00005011260	MAPRE1 (ENSPCTG00005011307) #34	DNMT3B (ENSPCTG00005011472) #35	COMMD7 (ENSPCTG00005012985) #37	NOL4L (ENSPCTG00005013151)	ASXL1 (ENSPCTG00005013333)	KIF3B (ENSPCTG00005013787)	TM9SF4 (ENSPCTG00005013852)	HCK (ENSPCTG00005013922)	CCM2L (ENSPCTG00005014508)	XKR7 (ENSPCTG00005014688)
Blue whale	MODERN SPECIES	6	ENSBMSG00010014355	AHCY (ENSBMSG00010014387) #9	ENSBMSG00010014441 #10	EIF2S2 (ENSBMSG00010014478) #11	RALY (ENSBMSG00010014524) #12	ENSBMSG00010014552 #13	ZNF341 (ENSBMSG00010014577) #14	PXMP4 (ENSBMSG00010014607) #15	E2F1 (ENSBMSG00010014642) #16	NECAB3 (ENSBMSG00010014701) #17	ACTL10 (ENSBMSG00010014804) #18	ENSBMSG00010014818	ENSBMSG00010014841	CBFA2T2 (ENSBMSG00010014897) #19	SNTA1 (ENSBMSG00010014974) #21	CDK5RAP1 (ENSBMSG00010015008) #22	BPIFB1 (ENSBMSG00010015057) #24	BPIFA1 (ENSBMSG00010015165) #25	BPIFA3 (ENSBMSG00010015251) #26	BPIFB4 (ENSBMSG00010015330) #28	BPIFB3 (ENSBMSG00010015474) #29	BPIFB6 (ENSBMSG00010015545) #30	BPIFB2 (ENSBMSG00010015628) #31	ENSBMSG00010015685	MAPRE1 (ENSBMSG00010015710) #34	DNMT3B (ENSBMSG00010015879) #35	COMMD7 (ENSBMSG00010016369) #37	ENSBMSG00010016439	NOL4L (ENSBMSG00010016482)	ASXL1 (ENSBMSG00010012180)	KIF3B (ENSBMSG00010012233)
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00950000183176.a.s.a #19	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a.t #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259
Yarkand deer	MODERN SPECIES	15	ASIP (ENSCHYG00000021759) #10	EIF2S2 (ENSCHYG00000021669) #11	RALY (ENSCHYG00000021487) #12	CHMP4B (ENSCHYG00000021413) #13	ZNF341 (ENSCHYG00000021267) #14	PXMP4 (ENSCHYG00000021195) #15	E2F1 (ENSCHYG00000021119) #16	ACTL10 (ENSCHYG00000021085) #18	ENSCHYG00000021007	NECAB3 (ENSCHYG00000020779) #17	ENSCHYG00000020718	CBFA2T2 (ENSCHYG00000020600) #19	SNTA1 (ENSCHYG00000020536) #21	ENSCHYG00000020441 #23	ENSCHYG00000020289 ##31	CDK5RAP1 (ENSCHYG00000019777) #22	BPIFB1 (ENSCHYG00000019627) #24	BPIFA1 (ENSCHYG00000019488) #25	BPIFA3 (ENSCHYG00000019399) #26	ENSCHYG00000019367	ENSCHYG00000019281 #27	ENSCHYG00000019207 #27	ENSCHYG00000019160	BPIFB4 (ENSCHYG00000018989) #28	BPIFB3 (ENSCHYG00000018802) #29	BPIFB6 (ENSCHYG00000018569) #30	BPIFB2 (ENSCHYG00000018354) #31	SUN5 (ENSCHYG00000017917) #32	ENSCHYG00000017858	DNMT3B (ENSCHYG00000016553) #35	COMMD7 (ENSCHYG00000016228) #37
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00950000183176.a.s.a #19	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a.t #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259
Siberian musk deer	MODERN SPECIES	1198	ITCH (ENSMMSG00000011807)	AHCY (ENSMMSG00000011983) #9	ASIP (ENSMMSG00000012026) #10	EIF2S2 (ENSMMSG00000012063) #11	RALY (ENSMMSG00000012103) #12	CHMP4B (ENSMMSG00000012164) #13	ZNF341 (ENSMMSG00000012195) #14	PXMP4 (ENSMMSG00000012229) #15	E2F1 (ENSMMSG00000012256) #16	NECAB3 (ENSMMSG00000012299) #17	ACTL10 (ENSMMSG00000012331) #18	ENSMMSG00000012346	ENSMMSG00000012366	CBFA2T2 (ENSMMSG00000012397) #19	SNTA1 (ENSMMSG00000012500) #21	CDK5RAP1 (ENSMMSG00000012553) #22	ENSMMSG00000012657 #23	ENSMMSG00000012706 ##31	BPIFB1 (ENSMMSG00000012771) #24	BPIFA1 (ENSMMSG00000012839) #25	BPIFA3 (ENSMMSG00000012875) #26	ENSMMSG00000012907 #27	ENSMMSG00000012944
Bovidae	ANCESTRAL SPECIES	10	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a.s.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a.b #27	ENSGT01100000263546.d.b.a.b.b #27	ENSGT01100000263546.d.b.a.b.a.a #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32
Caprinae	ANCESTRAL SPECIES	21	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a.s.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b.a.b #27	ENSGT00950000183604.b.b	ENSGT00950000183604.b.a	ENSGT01100000263546.d.b.a.b.a.a #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.pb #34
Goat	MODERN SPECIES	4	ITCH (ENSCHIG00000013191)	AHCY (ENSCHIG00000026741) #9	ASIP (ENSCHIG00000014323) #10	ENSCHIG00000012008	ENSCHIG00000026317 #11	RALY (ENSCHIG00000026609) #12	CHMP4B (ENSCHIG00000015320) #13	ZNF341 (ENSCHIG00000018677) #14	PXMP4 (ENSCHIG00000019935) #15	E2F1 (ENSCHIG00000015683) #16	ACTL10 (ENSCHIG00000002177) #18	ENSCHIG00000024263	NECAB3 (ENSCHIG00000024415) #17	ENSCHIG00000017263 #19	SNTA1 (ENSCHIG00000026424) #21	CDK5RAP1 (ENSCHIG00000026048) #22	ENSCHIG00000006775 ##31	BPIFB1 (ENSCHIG00000017212) #24	BPIFA1 (ENSCHIG00000024834) #25	BPIFA3 (ENSCHIG00000019106) #26	ENSCHIG00000021482 #27	ENSCHIG00000023902	ENSCHIG00000014390 #27	ENSCHIG00000021281	ENSCHIG00000001593	ENSCHIG00000009057	BPIFB4 (ENSCHIG00000015953) #28	BPIFB3 (ENSCHIG00000023551) #29	BPIFB6 (ENSCHIG00000019460) #30	BPIFB2 (ENSCHIG00000026759) #31	SUN5 (ENSCHIG00000015270) #32
Rambouillet Sheep	MODERN SPECIES	4	MAP1LC3A (ENSOARG00020013584)	DYNLRB1 (ENSOARG00020013544)	ITCH (ENSOARG00020013255)	AHCY (ENSOARG00020012830) #9	ENSOARG00020012697 #11	RALY (ENSOARG00020012493) #12	CHMP4B (ENSOARG00020012426) #13	ZNF341 (ENSOARG00020012178) #14	PXMP4 (ENSOARG00020012090) #15	E2F1 (ENSOARG00020011997) #16	ENSOARG00020011959	NECAB3 (ENSOARG00020011215) #17	ENSOARG00020011066 #19	ENSOARG00020011013	SNTA1 (ENSOARG00020010934) #21	CDK5RAP1 (ENSOARG00020010445) #22	ENSOARG00020010310 ##31	BPIFA1 (ENSOARG00020009831) #25	BPIFA3 (ENSOARG00020009757) #26	ENSOARG00020009734 #27	ENSOARG00020009694	ENSOARG00020009657	ENSOARG00020009595	ENSOARG00020009537 #27	ENSOARG00020009477 #27	BPIFB4 (ENSOARG00020009376) #28	BPIFB3 (ENSOARG00020009266) #29	BPIFB6 (ENSOARG00020009171) #30	SUN5 (ENSOARG00020008881) #32	EFCAB8 (ENSOARG00020008596) #33	DNMT3B (ENSOARG00020007704) #35
Bovinae	ANCESTRAL SPECIES	23	ENSGT00390000014165.c.a.b.b.b	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562.a #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00950000183176.a.t #19	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a.s.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a.b #27	ENSGT00390000016972.a.b.a.b.b.b	ENSGT01100000263546.d.b.a.b.b #27	ENSGT01100000263546.d.b.a.b.a.a #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31
Bos	ANCESTRAL SPECIES	24	ENSGT00390000014165.c.a.b.b.b	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562.a #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00950000183176.a.t #19	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a.s.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a.b #27	ENSGT00390000016972.a.b.a.b.b.b	ENSGT01100000263546.d.b.a.b.b #27	ENSGT01100000263546.d.b.a.b.a.a #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000157014.a	ENSGT00390000014165.c.a.b.b.b	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562.a #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a.s.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT00940000170884	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a.b #27	ENSGT00390000016972.a.b.a.b.b.b	ENSGT01100000263546.d.b.a.b.b #27	ENSGT01100000263546.d.b.a.b.a.a #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31
Wild yak	MODERN SPECIES	860								ENSBMUG00000024806 #13	ZNF341 (ENSBMUG00000024798) #14	ENSBMUG00000024790 #15	E2F1 (ENSBMUG00000024777) #16	ACTL10 (ENSBMUG00000024774) #18	NECAB3 (ENSBMUG00000024769) #17	ENSBMUG00000024759 #19	SNTA1 (ENSBMUG00000024747) #21	CDK5RAP1 (ENSBMUG00000024744) #22	ENSBMUG00000024718 #23	ENSBMUG00000024715	BPIFB1 (ENSBMUG00000024706) #24	BPIFA1 (ENSBMUG00000024703) #25	BPIFA3 (ENSBMUG00000024694) #26	ENSBMUG00000024685	ENSBMUG00000024667 #27	ENSBMUG00000024661	TENT4A (ENSBMUG00000024650)	SRD5A1 (ENSBMUG00000024628)	NSUN2 (ENSBMUG00000024440)	UBE2QL1 (ENSBMUG00000024147)	ENSBMUG00000024143	ENSBMUG00000024138
Domestic yak	MODERN SPECIES	3	ENSBGRG00000006852 #11	RALY (ENSBGRG00000006728) #12	ENSBGRG00000006672 #13	ZNF341 (ENSBGRG00000006484) #14	ENSBGRG00000006426 #15	E2F1 (ENSBGRG00000006368) #16	ACTL10 (ENSBGRG00000006349) #18	C20orf144 (ENSBGRG00000006314)	NECAB3 (ENSBGRG00000006194) #17	ENSBGRG00000006176 #19	ENSBGRG00000006170	ENSBGRG00000006162	CBFA2T2 (ENSBGRG00000006122) #19	SNTA1 (ENSBGRG00000006075) #21	ENSBGRG00000006020 #23	CDK5RAP1 (ENSBGRG00000005894) #22	ENSBGRG00000005792	BPIFB1 (ENSBGRG00000005686) #24	BPIFA1 (ENSBGRG00000005622) #25	BPIFA3 (ENSBGRG00000005582) #26	ENSBGRG00000005555 #27	ENSBGRG00000005545	ENSBGRG00000005491 #27	ENSBGRG00000005469 #27	ENSBGRG00000005450	BPIFB4 (ENSBGRG00000005415) #28	BPIFB3 (ENSBGRG00000005308) #29	BPIFB6 (ENSBGRG00000005172) #30	BPIFB2 (ENSBGRG00000005124) #31	SUN5 (ENSBGRG00000004983) #32	ENSBGRG00000004944
Bos_b	ANCESTRAL SPECIES	26	ENSGT00390000014165.c.a.b.b.b	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663.r.a #13	ENSGT00390000000546 #14	ENSGT00390000001562.a.a #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00950000183176.a.s.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b.a.b #27	ENSGT00390000016972.a.b.a.b.b.b	ENSGT01100000263546.d.b.a.b.b #27	ENSGT01100000263546.d.b.a.b.a.a.b #27	ENSGT01100000263546.d.b.a.b.a.a.a #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31
Hybrid Bos Indicus	MODERN SPECIES	4	AHCY (ENSBIXG00005028542) #9	ASIP (ENSBIXG00005004914) #10	EIF2S2 (ENSBIXG00005006636) #11	RALY (ENSBIXG00005028479) #12	ENSBIXG00005004879 #13	ZNF341 (ENSBIXG00005028356) #14	ENSBIXG00005028326 #15	E2F1 (ENSBIXG00005028294) #16	NECAB3 (ENSBIXG00005028280) #17	ACTL10 (ENSBIXG00005028235) #18	ENSBIXG00005028229	ENSBIXG00005004852	ENSBIXG00005028172 #19	ENSBIXG00005004838	SNTA1 (ENSBIXG00005028108) #21	CDK5RAP1 (ENSBIXG00005028076) #22	ENSBIXG00005027971 #23	ENSBIXG00005027937 ##31	BPIFB1 (ENSBIXG00005027890) #24	ENSBIXG00005027873	BPIFA1 (ENSBIXG00005027857) #25	BPIFA3 (ENSBIXG00005027808) #26	ENSBIXG00005005327 #27	ENSBIXG00005027704	ENSBIXG00005027683 #27	ENSBIXG00005027671 #27	BPIFB4 (ENSBIXG00005027645) #28	BPIFB3 (ENSBIXG00005027593) #29	BPIFB6 (ENSBIXG00005027534) #30	BPIFB2 (ENSBIXG00005027458) #31	SUN5 (ENSBIXG00005027425) #32
Cow	MODERN SPECIES	4	AHCY (ENSBTAG00000018101) #9	ASIP (ENSBTAG00000034077) #10	EIF2S2 (ENSBTAG00000005969) #11	RALY (ENSBTAG00000016524) #12	CHMP4B (ENSBTAG00000013387) #13	ZNF341 (ENSBTAG00000039313) #14	PXMP4 (ENSBTAG00000038738) #15	E2F1 (ENSBTAG00000003971) #16	C13H20orf144 (ENSBTAG00000003962)	NECAB3 (ENSBTAG00000003946) #17	ENSBTAG00000053797	ENSBTAG00000053051	ENSBTAG00000010131 #19	SNTA1 (ENSBTAG00000000512) #21	ENSBTAG00000031354 #23	CDK5RAP1 (ENSBTAG00000018535) #22	BPIFB5 (ENSBTAG00000031361) ##31	BPIFB1 (ENSBTAG00000015724) #24	BPIFA1 (ENSBTAG00000017098) #25	BPIFA3 (ENSBTAG00000006802) #26	ENSBTAG00000031373	BPIFA2B (ENSBTAG00000019752) #27	ENSBTAG00000011704	BPIFA2C (ENSBTAG00000031376) #27	ENSBTAG00000031375 #27	BPIFA2A (ENSBTAG00000009144) #27	BPIFB4 (ENSBTAG00000038412) #28	BPIFB3 (ENSBTAG00000038687) #29	BPIFB6 (ENSBTAG00000010112) #30	BPIFB2 (ENSBTAG00000019200) #31	SUN5 (ENSBTAG00000013056) #32
American bison	MODERN SPECIES	3266	ENSBBBG00000007314	AHCY (ENSBBBG00000018017) #9	ASIP (ENSBBBG00000018031) #10	EIF2S2 (ENSBBBG00000004436) #11	RALY (ENSBBBG00000004441) #12	CHMP4B (ENSBBBG00000004443) #13	ZNF341 (ENSBBBG00000018116) #14	ENSBBBG00000004455 #15	E2F1 (ENSBBBG00000008832) #16	ACTL10 (ENSBBBG00000018177) #18	ENSBBBG00000004464	NECAB3 (ENSBBBG00000018216) #17	ENSBBBG00000018224	ENSBBBG00000018285 #19	SNTA1 (ENSBBBG00000018296) #21	CDK5RAP1 (ENSBBBG00000018377) #22	ENSBBBG00000009135 #23	BPIFB1 (ENSBBBG00000018409) #24	BPIFA1 (ENSBBBG00000018424) #25	BPIFA3 (ENSBBBG00000004515) #26	ENSBBBG00000018447	ENSBBBG00000018462 #27	ENSBBBG00000004535	ENSBBBG00000004542	ENSBBBG00000018490 #27	ENSBBBG00000018502 #27	ENSBBBG00000018505
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35
Carnivora	ANCESTRAL SPECIES	20	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34
Caniformia	ANCESTRAL SPECIES		ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34
Caniformia_b	ANCESTRAL SPECIES		ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35
Ursidae	ANCESTRAL SPECIES	14	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.b #11	ENSGT00940000157601 #12	ENSGT00940000154663.j #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000170884	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35
Ursus	ANCESTRAL SPECIES	1	ENSGT00940000158853	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804.b #11	ENSGT00940000157601 #12	ENSGT00940000154663.j #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Polar bear	MODERN SPECIES	253							EIF2S2 (ENSUMAG00000024105) #11	RALY (ENSUMAG00000024106) #12	CHMP4B (ENSUMAG00000024107) #13	ZNF341 (ENSUMAG00000024108) #14	PXMP4 (ENSUMAG00000024110) #15	E2F1 (ENSUMAG00000024112) #16	NECAB3 (ENSUMAG00000024113) #17	ACTL10 (ENSUMAG00000024114) #18	CBFA2T2 (ENSUMAG00000024115) #19	CDK5RAP1 (ENSUMAG00000024117) #22	BPIFB1 (ENSUMAG00000024143) #24	BPIFA1 (ENSUMAG00000024148) #25	BPIFA3 (ENSUMAG00000024153) #26	ENSUMAG00000024157	ENSUMAG00000024158 #27	BPIFB4 (ENSUMAG00000024159) #28	BPIFB6 (ENSUMAG00000024161) #30	BPIFB2 (ENSUMAG00000024164) #31	EFCAB8 (ENSUMAG00000024168) #33	MAPRE1 (ENSUMAG00000024172) #34	DNMT3B (ENSUMAG00000024174) #35	COMMD7 (ENSUMAG00000024175) #37	NOL4L (ENSUMAG00000024177)	ASXL1 (ENSUMAG00000024178)	ENSUMAG00000024179
American black bear	MODERN SPECIES	3039																ENSUAMG00000025658 #22
Giant Panda	MODERN SPECIES	4	MAP1LC3A (ENSAMEG00000009183)	ENSAMEG00000009179	ITCH (ENSAMEG00000009134)	AHCY (ENSAMEG00000009105) #9	ASIP (ENSAMEG00000009091) #10	EIF2S2 (ENSAMEG00000009071) #11	RALY (ENSAMEG00000009050) #12	CHMP4B (ENSAMEG00000009038) #13	ZNF341 (ENSAMEG00000009012) #14	ENSAMEG00000009004 #15	ENSAMEG00000008958 #17	ACTL10 (ENSAMEG00000008990) #18	ENSAMEG00000019179	CBFA2T2 (ENSAMEG00000008925) #19	SNTA1 (ENSAMEG00000012992) #21	CDK5RAP1 (ENSAMEG00000013021) #22	ENSAMEG00000013060	BPIFB1 (ENSAMEG00000013065) #24	BPIFA1 (ENSAMEG00000013090) #25	BPIFA3 (ENSAMEG00000013101) #26	ENSAMEG00000013108	ENSAMEG00000013119 #27	BPIFB4 (ENSAMEG00000013134) #28	BPIFB3 (ENSAMEG00000013151) #29	BPIFB6 (ENSAMEG00000013170) #30	BPIFB2 (ENSAMEG00000013181) #31	SUN5 (ENSAMEG00000013221) #32	ENSAMEG00000024835	MAPRE1 (ENSAMEG00000013238) #34	DNMT3B (ENSAMEG00000013257) #35	COMMD7 (ENSAMEG00000013318) #37
Mustelinae	ANCESTRAL SPECIES	11	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00390000007560.q.a.d	ENSGT00930000151259	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35
Ferret	DUPLICATION
Ferret	DUPLICATION
Ferret	MODERN SPECIES	180	MAP1LC3A (ENSMPUG00000017814)	DYNLRB1 (ENSMPUG00000017815)	ITCH (ENSMPUG00000017816)	AHCY (ENSMPUG00000017817) #9	ASIP (ENSMPUG00000017818) #10	EIF2S2 (ENSMPUG00000017819) #11	RALY (ENSMPUG00000017820) #12	CHMP4B (ENSMPUG00000017821) #13	ZNF341 (ENSMPUG00000017822) #14	PXMP4 (ENSMPUG00000017823) #15	E2F1 (ENSMPUG00000017824) #16	NECAB3 (ENSMPUG00000017825) #17	ENSMPUG00000017829	CBFA2T2 (ENSMPUG00000017831) #19	SNTA1 (ENSMPUG00000017832) #21	ENSMPUG00000017835 #22	ENSMPUG00000017836 #22	ENSMPUG00000017837 #22	ENSMPUG00000017838	ENSMPUG00000017839	BPIFB1 (ENSMPUG00000017841) #24	BPIFA1 (ENSMPUG00000017848) #25	BPIFA3 (ENSMPUG00000017855) #26	ENSMPUG00000017856 #27	ENSMPUG00000017857	BPIFB4 (ENSMPUG00000017858) #28	ENSMPUG00000017860	BPIFB3 (ENSMPUG00000017861) #29	ENSMPUG00000017862	BPIFB2 (ENSMPUG00000017863) #31	SUN5 (ENSMPUG00000017864) #32
Ferret	MODERN SPECIES	180	ITCH (ENSMPUG00000017816)	AHCY (ENSMPUG00000017817) #9	ASIP (ENSMPUG00000017818) #10	EIF2S2 (ENSMPUG00000017819) #11	RALY (ENSMPUG00000017820) #12	CHMP4B (ENSMPUG00000017821) #13	ZNF341 (ENSMPUG00000017822) #14	PXMP4 (ENSMPUG00000017823) #15	E2F1 (ENSMPUG00000017824) #16	NECAB3 (ENSMPUG00000017825) #17	ENSMPUG00000017829	CBFA2T2 (ENSMPUG00000017831) #19	SNTA1 (ENSMPUG00000017832) #21	ENSMPUG00000017835 #22	ENSMPUG00000017836 #22	ENSMPUG00000017837 #22	ENSMPUG00000017838	ENSMPUG00000017839	BPIFB1 (ENSMPUG00000017841) #24	BPIFA1 (ENSMPUG00000017848) #25	BPIFA3 (ENSMPUG00000017855) #26	ENSMPUG00000017856 #27	ENSMPUG00000017857	BPIFB4 (ENSMPUG00000017858) #28	ENSMPUG00000017860	BPIFB3 (ENSMPUG00000017861) #29	ENSMPUG00000017862	BPIFB2 (ENSMPUG00000017863) #31	SUN5 (ENSMPUG00000017864) #32	ENSMPUG00000019031	EFCAB8 (ENSMPUG00000017865) #33
Ferret	MODERN SPECIES	180	DYNLRB1 (ENSMPUG00000017815)	ITCH (ENSMPUG00000017816)	AHCY (ENSMPUG00000017817) #9	ASIP (ENSMPUG00000017818) #10	EIF2S2 (ENSMPUG00000017819) #11	RALY (ENSMPUG00000017820) #12	CHMP4B (ENSMPUG00000017821) #13	ZNF341 (ENSMPUG00000017822) #14	PXMP4 (ENSMPUG00000017823) #15	E2F1 (ENSMPUG00000017824) #16	NECAB3 (ENSMPUG00000017825) #17	ENSMPUG00000017829	CBFA2T2 (ENSMPUG00000017831) #19	SNTA1 (ENSMPUG00000017832) #21	ENSMPUG00000017835 #22	ENSMPUG00000017836 #22	ENSMPUG00000017837 #22	ENSMPUG00000017838	ENSMPUG00000017839	BPIFB1 (ENSMPUG00000017841) #24	BPIFA1 (ENSMPUG00000017848) #25	BPIFA3 (ENSMPUG00000017855) #26	ENSMPUG00000017856 #27	ENSMPUG00000017857	BPIFB4 (ENSMPUG00000017858) #28	ENSMPUG00000017860	BPIFB3 (ENSMPUG00000017861) #29	ENSMPUG00000017862	BPIFB2 (ENSMPUG00000017863) #31	SUN5 (ENSMPUG00000017864) #32	ENSMPUG00000019031
American mink	MODERN SPECIES	17	ENSNVIG00000017524	ITCH (ENSNVIG00000017551)	AHCY (ENSNVIG00000017607) #9	ASIP (ENSNVIG00000017624) #10	EIF2S2 (ENSNVIG00000017647) #11	RALY (ENSNVIG00000017666) #12	CHMP4B (ENSNVIG00000017728) #13	ZNF341 (ENSNVIG00000017752) #14	PXMP4 (ENSNVIG00000017800) #15	E2F1 (ENSNVIG00000017832) #16	NECAB3 (ENSNVIG00000017859) #17	ACTL10 (ENSNVIG00000017892) #18	ENSNVIG00000017895	CBFA2T2 (ENSNVIG00000017905) #19	SNTA1 (ENSNVIG00000017966) #21	CDK5RAP1 (ENSNVIG00000017990) #22	ENSNVIG00000018027 ##31	BPIFB1 (ENSNVIG00000018051) #24	BPIFA1 (ENSNVIG00000018087) #25	BPIFA3 (ENSNVIG00000018144) #26	ENSNVIG00000018194	BPIFB4 (ENSNVIG00000018205) #28	BPIFB3 (ENSNVIG00000018227) #29	BPIFB6 (ENSNVIG00000018242) #30	BPIFB2 (ENSNVIG00000018261) #31	SUN5 (ENSNVIG00000018291) #32	ENSNVIG00000018321	ENSNVIG00000018325	MAPRE1 (ENSNVIG00000018328) #34	DNMT3B (ENSNVIG00000018344) #35	COMMD7 (ENSNVIG00000018598) #37
Canidae	ANCESTRAL SPECIES	19	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.d.a ##31	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.a #34
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00390000017515.o.a	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00940000154661.a.a	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.d.a ##31	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.a #34
Dog	MODERN SPECIES	16	ITCH (ENSCAFG00845015881)	ENSCAFG00845015788	ENSCAFG00845015756 #9	ASIP (ENSCAFG00845015715) #10	EIF2S2 (ENSCAFG00845025914) #11	RALY (ENSCAFG00845025648) #12	CHMP4B (ENSCAFG00845025558) #13	ZNF341 (ENSCAFG00845025407) #14	TIMM8A (ENSCAFG00845025368)	E2F1 (ENSCAFG00845025182) #16	ENSCAFG00845025127 #18	ENSCAFG00845025080	NECAB3 (ENSCAFG00845024784) #17	CBFA2T2 (ENSCAFG00845024493) #19	CDK5RAP1 (ENSCAFG00845024407) #21	CDK5RAP1 (ENSCAFG00845024161) #22	ENSCAFG00845024074 #23	ENSCAFG00845024007 ##31	BPIFB1 (ENSCAFG00845023875) #24	BPIFA1 (ENSCAFG00845023690) #25	BPIFA3 (ENSCAFG00845023594) #26	ENSCAFG00845023553	BPIFA2 (ENSCAFG00845023488) #27	ENSCAFG00845023399 ##31	BPIFB4 (ENSCAFG00845023291) #28	BPIFB3 (ENSCAFG00845023196) #29	BPIFB6 (ENSCAFG00845023097) #30	BPIFB2 (ENSCAFG00845022982) #31	SUN5 (ENSCAFG00845022906) #32	ENSCAFG00845022856	MAPRE1 (ENSCAFG00845022793) #34
Dingo	MODERN SPECIES	343	ENSCAFG00020005093	ASIP (ENSCAFG00020005092) #10	EIF2S2 (ENSCAFG00020005078) #11	RALY (ENSCAFG00020005069) #12	ENSCAFG00020005046	CHMP4B (ENSCAFG00020005042) #13	ZNF341 (ENSCAFG00020004998) #14	ENSCAFG00020004983	PXMP4 (ENSCAFG00020004976) #15	E2F1 (ENSCAFG00020004968) #16	ACTL10 (ENSCAFG00020004965) #18	ENSCAFG00020004963	NECAB3 (ENSCAFG00020004926) #17	CBFA2T2 (ENSCAFG00020004923) #19	SNTA1 (ENSCAFG00020004908) #21	CDK5RAP1 (ENSCAFG00020004901) #22	ENSCAFG00020004889 ##31	BPIFB1 (ENSCAFG00020004882) #24	BPIFA1 (ENSCAFG00020004859) #25	BPIFA3 (ENSCAFG00020004853) #26	ENSCAFG00020004846	ENSCAFG00020004841 #27	BPIFB4 (ENSCAFG00020004810) #28	BPIFB3 (ENSCAFG00020004800) #29	BPIFB6 (ENSCAFG00020004797) #30	BPIFB2 (ENSCAFG00020004786) #31	SUN5 (ENSCAFG00020004779) #32	EFCAB8 (ENSCAFG00020004774) #33	ENSCAFG00020004771 #34	DNMT3B (ENSCAFG00020004474) #35	COMMD7 (ENSCAFG00020004437) #37
Red fox	MODERN SPECIES	79	ENSVVUG00000004434	ENSVVUG00000004473	AHCY (ENSVVUG00000004477) #9	ENSVVUG00000004504 #10	ENSVVUG00000004519 #11	RALY (ENSVVUG00000004546) #12	ENSVVUG00000004559	CHMP4B (ENSVVUG00000004581) #13	ZNF341 (ENSVVUG00000004600) #14	PXMP4 (ENSVVUG00000004749) #15	E2F1 (ENSVVUG00000004757) #16	NECAB3 (ENSVVUG00000004770) #17	ACTL10 (ENSVVUG00000004819) #18	CBFA2T2 (ENSVVUG00000004825) #19	SNTA1 (ENSVVUG00000004863) #21	CDK5RAP1 (ENSVVUG00000004885) #22	ENSVVUG00000004922 #23	BPIFB1 (ENSVVUG00000004954) #24	BPIFA1 (ENSVVUG00000004968) #25	BPIFA3 (ENSVVUG00000004970) #26	ENSVVUG00000004973	ENSVVUG00000004976 #27	BPIFB4 (ENSVVUG00000004980) #28	BPIFB3 (ENSVVUG00000004985) #29	BPIFB6 (ENSVVUG00000005002) #30	BPIFB2 (ENSVVUG00000005019) #31	SUN5 (ENSVVUG00000005048) #32	EFCAB8 (ENSVVUG00000005061) #33	DNMT3B (ENSVVUG00000005117) #35	COMMD7 (ENSVVUG00000005192) #37	NOL4L (ENSVVUG00000005193)
Felidae	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014.d	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.ob.b #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00390000011067.A	ENSGT00940000157014.d	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Tiger	MODERN SPECIES	25	MAP1LC3A (ENSPTIG00000008448)	DYNLRB1 (ENSPTIG00000007501)	ITCH (ENSPTIG00000005169)	AHCY (ENSPTIG00000022112) #9	ASIP (ENSPTIG00000022078) #10	EIF2S2 (ENSPTIG00000022041) #11	RALY (ENSPTIG00000021910) #12	CHMP4B (ENSPTIG00000021794) #13	ZNF341 (ENSPTIG00000019844) #14	PXMP4 (ENSPTIG00000018768) #15	E2F1 (ENSPTIG00000016955) #16	ACTL10 (ENSPTIG00000001807) #18	NECAB3 (ENSPTIG00000009683) #17	CBFA2T2 (ENSPTIG00000020570) #19	SNTA1 (ENSPTIG00000018658) #21	CDK5RAP1 (ENSPTIG00000016645) #22	ENSPTIG00000013877 ##31	BPIFB1 (ENSPTIG00000012791) #24	BPIFA1 (ENSPTIG00000008137) #25	BPIFA3 (ENSPTIG00000006775) #26	ENSPTIG00000006019	BPIFA2 (ENSPTIG00000002366) #27	BPIFB4 (ENSPTIG00000021563) #28	BPIFB3 (ENSPTIG00000019519) #29	BPIFB6 (ENSPTIG00000017591) #30	BPIFB2 (ENSPTIG00000017316) #31	SUN5 (ENSPTIG00000013586) #32	EFCAB8 (ENSPTIG00000010965) #33	MAPRE1 (ENSPTIG00000009541) #34	DNMT3B (ENSPTIG00000015474) #35	COMMD7 (ENSPTIG00000013437) #37
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00390000011067.A	ENSGT00940000157014.d	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263545.a.b.d.a	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
leopard	MODERN SPECIES	32	MAP1LC3A (ENSPPRG00000020454)	DYNLRB1 (ENSPPRG00000018205)	ITCH (ENSPPRG00000017149)	AHCY (ENSPPRG00000015988) #9	ASIP (ENSPPRG00000015476) #10	EIF2S2 (ENSPPRG00000015102) #11	RALY (ENSPPRG00000014593) #12	CHMP4B (ENSPPRG00000013846) #13	ZNF341 (ENSPPRG00000013033) #14	PXMP4 (ENSPPRG00000011904) #15	E2F1 (ENSPPRG00000011405) #16	NECAB3 (ENSPPRG00000011300) #17	ACTL10 (ENSPPRG00000015321) #18	CBFA2T2 (ENSPPRG00000009192) #19	SNTA1 (ENSPPRG00000007797) #21	CDK5RAP1 (ENSPPRG00000007463) #22	ENSPPRG00000006537 ##31	BPIFB1 (ENSPPRG00000005709) #24	BPIFA1 (ENSPPRG00000004405) #25	BPIFA3 (ENSPPRG00000003416) #26	ENSPPRG00000003204	BPIFB4 (ENSPPRG00000003010) #28	BPIFB3 (ENSPPRG00000002108) #29	BPIFB6 (ENSPPRG00000000780) #30	BPIFB2 (ENSPPRG00000000479) #31	SUN5 (ENSPPRG00000000075) #32	EFCAB8 (ENSPPRG00000020444) #33	MAPRE1 (ENSPPRG00000019866) #34	DNMT3B (ENSPPRG00000014375) #35	COMMD7 (ENSPPRG00000011687) #37	NOL4L (ENSPPRG00000010808)
lion	MODERN SPECIES	3	DYNLRB1 (ENSPLOG00000017257)	ITCH (ENSPLOG00000017081)	ENSPLOG00000016963 #9	ASIP (ENSPLOG00000016919) #10	EIF2S2 (ENSPLOG00000016881) #11	RALY (ENSPLOG00000016811) #12	CHMP4B (ENSPLOG00000016734) #13	ZNF341 (ENSPLOG00000016700) #14	PXMP4 (ENSPLOG00000016650) #15	E2F1 (ENSPLOG00000016585) #16	ACTL10 (ENSPLOG00000016575) #18	ENSPLOG00000016536	NECAB3 (ENSPLOG00000016443) #17	CBFA2T2 (ENSPLOG00000016366) #19	SNTA1 (ENSPLOG00000016287) #21	CDK5RAP1 (ENSPLOG00000016219) #22	ENSPLOG00000016115 ##31	BPIFB1 (ENSPLOG00000016033) #24	BPIFA1 (ENSPLOG00000015860) #25	BPIFA3 (ENSPLOG00000015799) #26	ENSPLOG00000015750	BPIFA2 (ENSPLOG00000015684) #27	BPIFB4 (ENSPLOG00000015542) #28	BPIFB3 (ENSPLOG00000015334) #29	BPIFB6 (ENSPLOG00000015103) #30	BPIFB2 (ENSPLOG00000014965) #31	SUN5 (ENSPLOG00000014700) #32	EFCAB8 (ENSPLOG00000014634) #33	MAPRE1 (ENSPLOG00000014581) #34	DNMT3B (ENSPLOG00000014171) #35	COMMD7 (ENSPLOG00000013968) #37
Cat	MODERN SPECIES	2	MAP1LC3A (ENSFCAG00000022040)	DYNLRB1 (ENSFCAG00000002304)	ITCH (ENSFCAG00000008780)	AHCY (ENSFCAG00000007301) #9	ASIP (ENSFCAG00000011037) #10	RALY (ENSFCAG00000025252) #12	EIF2S2 (ENSFCAG00000026834) #11	CHMP4B (ENSFCAG00000025893) #13	ZNF341 (ENSFCAG00000018478) #14	E2F1 (ENSFCAG00000005016) #16	NECAB3 (ENSFCAG00000005010) #17	ACTL10 (ENSFCAG00000005015) #18	CA3H20orf144 (ENSFCAG00000021903)	CBFA2T2 (ENSFCAG00000030382) #19	SNTA1 (ENSFCAG00000026500) #21	CDK5RAP1 (ENSFCAG00000015197) #22	ENSFCAG00000049613 #23	ENSFCAG00000030030	BPIFA1 (ENSFCAG00000015193) #25	BPIFA3 (ENSFCAG00000022440) #26	ENSFCAG00000015188	BPIFA2 (ENSFCAG00000043660) #27	BPIFB4 (ENSFCAG00000015185) #28	BPIFB3 (ENSFCAG00000015183) #29	BPIFB6 (ENSFCAG00000015181) #30	BPIFB2 (ENSFCAG00000015179) #31	SUN5 (ENSFCAG00000025943) #32	EFCAB8 (ENSFCAG00000037633) #33	MAPRE1 (ENSFCAG00000007783) #34	DNMT3B (ENSFCAG00000007779) #35	ENSFCAG00000044277 #37
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01010000222653	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35
Equus	ANCESTRAL SPECIES	8	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT01050000245239.e.b	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b.a #24	ENSGT01100000263546.d.b.a.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.a.a.a.b.a #25	ENSGT01100000263546.d.a ##31	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37
Donkey	MODERN SPECIES	6	ENSEASG00005037670 #9	ENSEASG00005028379 #9	ENSEASG00005033842	ASIP (ENSEASG00005024850) #10	EIF2S2 (ENSEASG00005008498) #11	RALY (ENSEASG00005008501) #12	ENSEASG00005034253 #13	ZNF341 (ENSEASG00005008514) #14	PXMP4 (ENSEASG00005035010) #15	E2F1 (ENSEASG00005008538) #16	ENSEASG00005032176 #18	ENSEASG00005008547	NECAB3 (ENSEASG00005008543) #17	CBFA2T2 (ENSEASG00005008552) #19	SNTA1 (ENSEASG00005008555) #21	CDK5RAP1 (ENSEASG00005008558) #22	ENSEASG00005036966 ##31	BPIFB1 (ENSEASG00005026747) #24	BPIFA3 (ENSEASG00005008570) #26	ENSEASG00005028659	ENSEASG00005004350 #25	ENSEASG00005034954 ##31	BPIFA2 (ENSEASG00005007789) #27	ENSEASG00005037736	BPIFB4 (ENSEASG00005004467) #28	BPIFB3 (ENSEASG00005004457) #29	BPIFB6 (ENSEASG00005004435) #30	BPIFB2 (ENSEASG00005004416) #31	SUN5 (ENSEASG00005004397) #32	EFCAB8 (ENSEASG00005004382) #33	MAPRE1 (ENSEASG00005004369) #34
Horse	MODERN SPECIES	14	ENSECAG00000060369 #9	ENSECAG00000020551 #9	ENSECAG00000055038	ASIP (ENSECAG00000004241) #10	ENSECAG00000040547 #11	EIF2S2 (ENSECAG00000050295) #11	RALY (ENSECAG00000012357) #12	CHMP4B (ENSECAG00000008311) #13	ZNF341 (ENSECAG00000000301) #14	PXMP4 (ENSECAG00000024954) #15	ACTL10 (ENSECAG00000001232) #18	ENSECAG00000049637	NECAB3 (ENSECAG00000012086) #17	CBFA2T2 (ENSECAG00000025052) #19	SNTA1 (ENSECAG00000057698) #21	SNTA1 (ENSECAG00000020715) #22	ENSECAG00000000778 ##31	ENSECAG00000023336 #24	ENSECAG00000041183 #25	ENSECAG00000020661 #26	ENSECAG00000027711 #26	ENSECAG00000014407 #24	ENSECAG00000053425	ENSECAG00000037593 #25	ENSECAG00000022575 #25	ENSECAG00000041946 #25	ENSECAG00000044582 ##31	BPIFA2 (ENSECAG00000000297) #27	LATH (ENSECAG00000033314) ##31	ENSECAG00000033869 #27	ENSECAG00000045050 ##31
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00930000151259	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00950000183131.a #17	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00490000043329.a.a.a.pb #34	ENSGT00940000156928 #35	ENSGT00390000012419 #37	ENSGT00940000157729	ENSGT00520000055578.a.a.c	ENSGT00940000153739.a.a.j
Microbat	MODERN SPECIES	997	ITCH (ENSMLUG00000004798)	AHCY (ENSMLUG00000001070) #9	ASIP (ENSMLUG00000001062) #10	EIF2S2 (ENSMLUG00000005335) #11	ENSMLUG00000005330 #12	CHMP4B (ENSMLUG00000015397) #13	ENSMLUG00000027593	ZNF341 (ENSMLUG00000015386) #14	PXMP4 (ENSMLUG00000015379) #15	E2F1 (ENSMLUG00000015371) #16	ACTL10 (ENSMLUG00000023024) #18	NECAB3 (ENSMLUG00000015354) #17	CBFA2T2 (ENSMLUG00000015344) #19	ENSMLUG00000023956	SNTA1 (ENSMLUG00000005643) #21	CDK5RAP1 (ENSMLUG00000005632) #22	ENSMLUG00000003825 #23	ENSMLUG00000029998 ##31	ENSMLUG00000003811	BPIFA1 (ENSMLUG00000000670) #25	BPIFA3 (ENSMLUG00000000658) #26	ENSMLUG00000016865 #27	BPIFB4 (ENSMLUG00000016442) #28	BPIFB3 (ENSMLUG00000016437) #29	ENSMLUG00000016424 #30	BPIFB2 (ENSMLUG00000016415) #31	SUN5 (ENSMLUG00000016408) #32	MAPRE1 (ENSMLUG00000016403) #34	DNMT3B (ENSMLUG00000016384) #35	COMMD7 (ENSMLUG00000013887) #37	NOL4L (ENSMLUG00000001048)
Greater horseshoe bat	MODERN SPECIES	15	ITCH (ENSRFEG00010007315)	AHCY (ENSRFEG00010007632) #9	ASIP (ENSRFEG00010007692) #10	EIF2S2 (ENSRFEG00010007720) #11	RALY (ENSRFEG00010007771) #12	CHMP4B (ENSRFEG00010007840) #13	ENSRFEG00010007891	ZNF341 (ENSRFEG00010007927) #14	PXMP4 (ENSRFEG00010008002) #15	E2F1 (ENSRFEG00010008064) #16	NECAB3 (ENSRFEG00010008150) #17	ACTL10 (ENSRFEG00010008302) #18	C20orf144 (ENSRFEG00010008315)	CBFA2T2 (ENSRFEG00010008347) #19	SNTA1 (ENSRFEG00010008565) #21	CDK5RAP1 (ENSRFEG00010008644) #22	BPIFB1 (ENSRFEG00010008738) #24	ENSRFEG00010008900 #25	BPIFA3 (ENSRFEG00010009054) #26	BPIFA2 (ENSRFEG00010009183) #27	BPIFB4 (ENSRFEG00010009259) #28	BPIFB3 (ENSRFEG00010009403) #29	BPIFB6 (ENSRFEG00010009586) #30	BPIFB2 (ENSRFEG00010009739) #31	SUN5 (ENSRFEG00010009894) #32	MAPRE1 (ENSRFEG00010010133) #34	DNMT3B (ENSRFEG00010010315) #35	COMMD7 (ENSRFEG00010010850) #37	NOL4L (ENSRFEG00010011006)	ASXL1 (ENSRFEG00010011119)	KIF3B (ENSRFEG00010011227)
Megabat	MODERN SPECIES	372								CHMP4B (ENSPVAG00000010293) #13	ZNF341 (ENSPVAG00000010292) #14	PXMP4 (ENSPVAG00000010291) #15	E2F1 (ENSPVAG00000010290) #16	C20orf144 (ENSPVAG00000010288)	NECAB3 (ENSPVAG00000010287) #17	CBFA2T2 (ENSPVAG00000010286) #19	SNTA1 (ENSPVAG00000010285) #21	CDK5RAP1 (ENSPVAG00000010283) #22	ENSPVAG00000010282
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160361 #22
Common shrew	MODERN SPECIES	1858																CDK5RAP1 (ENSSARG00000001599) #22
Hedgehog	MODERN SPECIES	539																CDK5RAP1 (ENSEEUG00000014180) #22
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259	ENSGT00490000043329.a.a.a #34
Xenarthra	ANCESTRAL SPECIES	316					ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23
Sloth	MODERN SPECIES	388																CDK5RAP1 (ENSCHOG00000009866) #22
Armadillo	MODERN SPECIES	1934		ENSDNOG00000048473	EIF2S2 (ENSDNOG00000047014) #11	ENSDNOG00000003227 #12	ENSDNOG00000038139	CHMP4B (ENSDNOG00000032154) #13	ZNF341 (ENSDNOG00000034368) #14	PXMP4 (ENSDNOG00000007975) #15	E2F1 (ENSDNOG00000046733) #16	ACTL10 (ENSDNOG00000032070) #18	ENSDNOG00000007969	NECAB3 (ENSDNOG00000039751) #17	CBFA2T2 (ENSDNOG00000007950) #19	SNTA1 (ENSDNOG00000040663) #21	ENSDNOG00000043650	CDK5RAP1 (ENSDNOG00000015236) #22	ENSDNOG00000039006 #23
Afrotheria	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259	ENSGT00490000043329.a.a.a #34
Afrotheria_a	ANCESTRAL SPECIES	3	ENSGT00390000011067.A	ENSGT00940000157014	ENSGT00950000182981.a #9	ENSGT00940000154258.a #10	ENSGT00390000001804 #11	ENSGT00940000157601 #12	ENSGT00940000154663 #13	ENSGT00390000000546 #14	ENSGT00390000001562 #15	ENSGT00940000159472 #16	ENSGT00940000162922 #18	ENSGT00390000013020	ENSGT00950000183131.a #17	ENSGT00950000183176.a #19	ENSGT00950000182863.A.a.b #21	ENSGT00940000160361 #22	ENSGT00940000164301 #23	ENSGT01100000263546.e.a.a.a.a ##31	ENSGT01100000263546.d.b.b #24	ENSGT01100000263546.d.b.a.a.a.a #25	ENSGT01100000263546.d.b.a.a.a.b #26	ENSGT00510000049750	ENSGT01100000263546.d.b.a.b #27	ENSGT01100000263546.e.a.a.a.b #28	ENSGT01100000263546.e.a.b #29	ENSGT01100000263546.e.b #30	ENSGT01100000263546.e.a.a.b #31	ENSGT00940000155225 #32	ENSGT00940000163617 #33	ENSGT00930000151259	ENSGT00490000043329.a.a.a #34
Elephant	MODERN SPECIES	180	DYNLRB1 (ENSLAFG00000029820)	ITCH (ENSLAFG00000011603)	ENSLAFG00000028026 #9	ASIP (ENSLAFG00000005229) #10	EIF2S2 (ENSLAFG00000016639) #11	RALY (ENSLAFG00000000321) #12	CHMP4B (ENSLAFG00000022958) #13	ZNF341 (ENSLAFG00000007128) #14	PXMP4 (ENSLAFG00000004616) #15	E2F1 (ENSLAFG00000018114) #16	ACTL10 (ENSLAFG00000018108) #18	ENSLAFG00000018104	NECAB3 (ENSLAFG00000018096) #17	CBFA2T2 (ENSLAFG00000018088) #19	SNTA1 (ENSLAFG00000027816) #21	CDK5RAP1 (ENSLAFG00000001172) #22	ENSLAFG00000014548 #23	ENSLAFG00000028139 ##31	BPIFB1 (ENSLAFG00000010267) #24	BPIFA1 (ENSLAFG00000010265) #25	ENSLAFG00000003615 #26	ENSLAFG00000000105 #27	BPIFB4 (ENSLAFG00000002061) #28	BPIFB3 (ENSLAFG00000018176) #29	BPIFB6 (ENSLAFG00000028326) #30	BPIFB2 (ENSLAFG00000008987) #31	SUN5 (ENSLAFG00000021496) #32	ENSLAFG00000032038 #33	ENSLAFG00000020535	MAPRE1 (ENSLAFG00000015453) #34	DNMT3B (ENSLAFG00000016965) #35
Hyrax	MODERN SPECIES	337																CDK5RAP1 (ENSPCAG00000005484) #22
Tenrec	MODERN SPECIES	477																CDK5RAP1 (ENSETEG00000015493) #22