Euteleostomi ANCESTRAL SPECIES ENSGT00940000160361 #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000160361 #22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000160361 #22 Amniota ANCESTRAL SPECIES 19 ENSGT00950000182893.a.a.b ENSGT00940000160046 ENSGT01030000234633.B.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 Mammalia ANCESTRAL SPECIES 15 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a.a ENSGT01100000263545.a.a.b ENSGT00940000160361 #22 ENSGT01100000263546.e.a.b #29 ENSGT00940000155225 #32 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b Theria ANCESTRAL SPECIES 19 ENSGT00950000183202.a.a ENSGT00940000160596 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a.a ENSGT01100000263545.a.a.b ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 Eutheria ANCESTRAL SPECIES 11 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 ENSGT00490000043329.a.a.a #34 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 Primates ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.a.b ##23 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Simiiformes ANCESTRAL SPECIES 18 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Catarrhini ANCESTRAL SPECIES 19 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00920000150801 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.a.b ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00920000150801 Rhinopithecus ANCESTRAL SPECIES 28 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.b ENSGT00390000001804.cb.b.a.b.d ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928.a #35 ENSGT00390000012419 #36 ENSGT00940000157729 Black snub-nosed monkey MODERN SPECIES 751 SNTA1 (ENSRBIG00000036776) #21 CDK5RAP1 (ENSRBIG00000041507) #22 BPIFB1 (ENSRBIG00000023420) #23 BPIFA1 (ENSRBIG00000028541) #24 BPIFA3 (ENSRBIG00000035313) #25 ENSRBIG00000028643 #26 BPIFA2 (ENSRBIG00000015461) #27 BPIFB4 (ENSRBIG00000032341) #28 BPIFB3 (ENSRBIG00000036953) #29 BPIFB6 (ENSRBIG00000024079) #30 BPIFB2 (ENSRBIG00000034361) #31 SUN5 (ENSRBIG00000030532) #32 EFCAB8 (ENSRBIG00000043449) #33 MAPRE1 (ENSRBIG00000042693) #34 ENSRBIG00000040209 #35 COMMD7 (ENSRBIG00000029627) #36 ENSRBIG00000037083 #37 Golden snub-nosed monkey MODERN SPECIES 896 ENSRROG00000039774 CHMP4B (ENSRROG00000029883) ZNF341 (ENSRROG00000032773) PXMP4 (ENSRROG00000033853) E2F1 (ENSRROG00000039358) NECAB3 (ENSRROG00000010016) ACTL10 (ENSRROG00000009546) C20orf144 (ENSRROG00000044990) CBFA2T2 (ENSRROG00000035361) SNTA1 (ENSRROG00000042592) #21 CDK5RAP1 (ENSRROG00000037532) #22 BPIFB1 (ENSRROG00000034793) #23 BPIFA1 (ENSRROG00000029579) #24 BPIFA3 (ENSRROG00000041448) #25 ENSRROG00000045498 #26 BPIFA2 (ENSRROG00000038035) #27 BPIFB4 (ENSRROG00000043803) #28 BPIFB3 (ENSRROG00000040199) #29 BPIFB6 (ENSRROG00000030178) #30 BPIFB2 (ENSRROG00000041108) #31 SUN5 (ENSRROG00000043627) #32 Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.a.b ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00920000150801 Vervet Monkey MODERN SPECIES 11 DYNLRB1 (ENSCSAG00000012088) ITCH (ENSCSAG00000012102) AHCY (ENSCSAG00000012115) ASIP (ENSCSAG00000012125) EIF2S2 (ENSCSAG00000012138) RALY (ENSCSAG00000012199) CHMP4B (ENSCSAG00000012213) ZNF341 (ENSCSAG00000012235) PXMP4 (ENSCSAG00000012247) E2F1 (ENSCSAG00000012265) ACTL10 (ENSCSAG00000018668) C20orf144 (ENSCSAG00000012277) NECAB3 (ENSCSAG00000012279) CBFA2T2 (ENSCSAG00000012281) SNTA1 (ENSCSAG00000012284) #21 CDK5RAP1 (ENSCSAG00000012289) #22 BPIFB1 (ENSCSAG00000012293) #23 BPIFA1 (ENSCSAG00000012315) #24 BPIFA3 (ENSCSAG00000012337) #25 BPIFA2 (ENSCSAG00000012361) #27 BPIFB4 (ENSCSAG00000012383) #28 BPIFB3 (ENSCSAG00000012411) #29 BPIFB6 (ENSCSAG00000012441) #30 BPIFB2 (ENSCSAG00000012461) #31 SUN5 (ENSCSAG00000012504) #32 ENSCSAG00000012522 MAPRE1 (ENSCSAG00000012529) #34 DNMT3B (ENSCSAG00000012573) #35 COMMD7 (ENSCSAG00000012589) #36 ENSCSAG00000012596 NOL4L (ENSCSAG00000012605) Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00390000001804.cb.b.a.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Olive baboon MODERN SPECIES 7 MAP1LC3A (ENSPANG00000014240) DYNLRB1 (ENSPANG00000009941) ITCH (ENSPANG00000009940) AHCY (ENSPANG00000026274) ASIP (ENSPANG00000022711) ENSPANG00000048492 ENSPANG00000018093 CHMP4B (ENSPANG00000018095) ZNF341 (ENSPANG00000018096) PXMP4 (ENSPANG00000016747) E2F1 (ENSPANG00000006985) ACTL10 (ENSPANG00000004544) C20orf144 (ENSPANG00000017513) NECAB3 (ENSPANG00000025546) CBFA2T2 (ENSPANG00000022710) CDK5RAP1 (ENSPANG00000025545) #22 BPIFB1 (ENSPANG00000017512) #23 BPIFA1 (ENSPANG00000024267) #24 BPIFA3 (ENSPANG00000021778) #25 BPIFA2 (ENSPANG00000024266) #27 BPIFB4 (ENSPANG00000022709) #28 BPIFB3 (ENSPANG00000020552) #29 BPIFB6 (ENSPANG00000009734) #30 BPIFB2 (ENSPANG00000019996) #31 ENSPANG00000024494 #32 EFCAB8 (ENSPANG00000023852) #33 MAPRE1 (ENSPANG00000016611) #34 DNMT3B (ENSPANG00000013451) #35 COMMD7 (ENSPANG00000001132) #36 C20orf203 (ENSPANG00000050681) NOL4L (ENSPANG00000025052) Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Drill MODERN SPECIES 1448 ENSMLEG00000033651 EIF2S2 (ENSMLEG00000039854) ENSMLEG00000004937 RALY (ENSMLEG00000028900) ENSMLEG00000000187 CHMP4B (ENSMLEG00000033156) ZNF341 (ENSMLEG00000031946) PXMP4 (ENSMLEG00000032170) E2F1 (ENSMLEG00000004422) ACTL10 (ENSMLEG00000008960) C20orf144 (ENSMLEG00000044204) NECAB3 (ENSMLEG00000041816) ENSMLEG00000010723 CBFA2T2 (ENSMLEG00000042497) SNTA1 (ENSMLEG00000040271) #21 CDK5RAP1 (ENSMLEG00000029036) #22 Sooty mangabey MODERN SPECIES 602 ENSCATG00000044570 ENSCATG00000044082 ENSCATG00000022568 RALY (ENSCATG00000031769) ENSCATG00000032333 CHMP4B (ENSCATG00000044221) ZNF341 (ENSCATG00000011236) PXMP4 (ENSCATG00000044653) E2F1 (ENSCATG00000039419) ACTL10 (ENSCATG00000022465) C20orf144 (ENSCATG00000044672) NECAB3 (ENSCATG00000034703) ENSCATG00000022295 CBFA2T2 (ENSCATG00000006176) SNTA1 (ENSCATG00000044322) #21 CDK5RAP1 (ENSCATG00000039579) #22 BPIFB1 (ENSCATG00000026260) #23 BPIFA1 (ENSCATG00000042760) #24 BPIFA3 (ENSCATG00000041213) #25 ENSCATG00000029740 #26 BPIFA2 (ENSCATG00000042233) #27 BPIFB4 (ENSCATG00000008536) #28 BPIFB3 (ENSCATG00000043728) #29 BPIFB6 (ENSCATG00000032216) #30 BPIFB2 (ENSCATG00000035818) #31 SUN5 (ENSCATG00000030423) #32 ENSCATG00000038780 EFCAB8 (ENSCATG00000043154) #33 MAPRE1 (ENSCATG00000041722) #34 DNMT3B (ENSCATG00000029815) #35 COMMD7 (ENSCATG00000033743) #36 Macaca ANCESTRAL SPECIES 16 ENSGT00390000001804.cb.b.a.b ENSGT00910000147823 ENSGT00390000001804.cb.b.a.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.a.b ##23 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Macaca_a ANCESTRAL SPECIES 18 ENSGT00940000153095.g.b.a.b.o ENSGT00390000001804.cb.b.a.a ENSGT00940000157601 ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT01100000263539.b.b.b.a.a.a.b ENSGT00940000159472 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.b.b.a.a.a.b.a.a.b.a ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.b.b.b ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.a.b ##23 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Crab-eating macaque MODERN SPECIES 1 ENSMFAG00000050321 ENSMFAG00000051093 CHMP4B (ENSMFAG00000040050) ENSMFAG00000045920 ENSMFAG00000039376 ENSMFAG00000047376 E2F1 (ENSMFAG00000042416) C20orf144 (ENSMFAG00000038184) NECAB3 (ENSMFAG00000035873) ENSMFAG00000050553 CBFA2T2 (ENSMFAG00000000820) ENSMFAG00000051247 ENSMFAG00000047567 ENSMFAG00000053042 SNTA1 (ENSMFAG00000039231) #21 CDK5RAP1 (ENSMFAG00000040526) #22 BPIFB1 (ENSMFAG00000036542) #23 BPIFA1 (ENSMFAG00000041209) #24 BPIFA3 (ENSMFAG00000002677) #25 BPIFA2 (ENSMFAG00000032051) #27 BPIFB4 (ENSMFAG00000030797) #28 BPIFB3 (ENSMFAG00000042929) #29 BPIFB6 (ENSMFAG00000036761) #30 BPIFB2 (ENSMFAG00000040564) #31 SUN5 (ENSMFAG00000035909) #32 EFCAB8 (ENSMFAG00000006242) #33 MAPRE1 (ENSMFAG00000007474) #34 DNMT3B (ENSMFAG00000040834) #35 COMMD7 (ENSMFAG00000041599) #36 C20orf203 (ENSMFAG00000063893) NOL4L (ENSMFAG00000038591) Rhesus MODERN SPECIES 1 ENSMMUG00000056046 EIF2S2 (ENSMMUG00000018095) RALY (ENSMMUG00000018093) CHMP4B (ENSMMUG00000008084) ZNF341 (ENSMMUG00000021492) PXMP4 (ENSMMUG00000023551) ENSMMUG00000064963 E2F1 (ENSMMUG00000023550) C10H20orf144 (ENSMMUG00000023548) NECAB3 (ENSMMUG00000023543) ENSMMUG00000052335 ENSMMUG00000063982 CBFA2T2 (ENSMMUG00000023541) ENSMMUG00000055776 ENSMMUG00000050166 CDK5RAP1 (ENSMMUG00000008470) #22 BPIFB1 (ENSMMUG00000062078) #23 BPIFA1 (ENSMMUG00000008925) #24 BPIFA3 (ENSMMUG00000008928) #25 BPIFA4 (ENSMMUG00000042013) ##23 BPIFA2 (ENSMMUG00000059440) #27 BPIFB4 (ENSMMUG00000020676) #28 BPIFB3 (ENSMMUG00000020671) #29 BPIFB6 (ENSMMUG00000020669) #30 BPIFB2 (ENSMMUG00000053133) #31 SUN5 (ENSMMUG00000009414) #32 ENSMMUG00000046729 EFCAB8 (ENSMMUG00000037750) #33 MAPRE1 (ENSMMUG00000063227) #34 DNMT3B (ENSMMUG00000019474) #35 C10H20orf203 (ENSMMUG00000063470) Pig-tailed macaque MODERN SPECIES 232 ENSMNEG00000029730 ENSMNEG00000044539 EIF2S2 (ENSMNEG00000029852) ENSMNEG00000018000 RALY (ENSMNEG00000044988) ENSMNEG00000039504 CHMP4B (ENSMNEG00000032657) ZNF341 (ENSMNEG00000034107) PXMP4 (ENSMNEG00000010793) E2F1 (ENSMNEG00000027050) ACTL10 (ENSMNEG00000026090) C20orf144 (ENSMNEG00000045111) NECAB3 (ENSMNEG00000040091) CBFA2T2 (ENSMNEG00000034428) SNTA1 (ENSMNEG00000038405) #21 CDK5RAP1 (ENSMNEG00000045565) #22 BPIFB1 (ENSMNEG00000043489) #23 BPIFA1 (ENSMNEG00000044088) #24 BPIFA3 (ENSMNEG00000005575) #25 ENSMNEG00000028931 ##23 BPIFA2 (ENSMNEG00000042823) #27 BPIFB4 (ENSMNEG00000043965) #28 BPIFB3 (ENSMNEG00000038601) #29 BPIFB6 (ENSMNEG00000035018) #30 BPIFB2 (ENSMNEG00000029774) #31 SUN5 (ENSMNEG00000033611) #32 ENSMNEG00000036815 EFCAB8 (ENSMNEG00000035540) #33 MAPRE1 (ENSMNEG00000039307) #34 DNMT3B (ENSMNEG00000038981) #35 COMMD7 (ENSMNEG00000041156) #36 Hominoidea ANCESTRAL SPECIES 17 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00920000150801 Hominidae ANCESTRAL SPECIES 18 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00390000013771.v ENSGT00940000154663.u ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00920000150801 Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00940000163568 ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00940000154663.u ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00910000147530 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00410000028250 Gorilla MODERN SPECIES 11 ASIP (ENSGGOG00000026572) ENSGGOG00000027170 ENSGGOG00000015546 RALY (ENSGGOG00000022709) CHMP4B (ENSGGOG00000007775) ENSGGOG00000025590 ZNF341 (ENSGGOG00000015775) PXMP4 (ENSGGOG00000044115) E2F1 (ENSGGOG00000003588) ACTL10 (ENSGGOG00000042107) C20orf144 (ENSGGOG00000038124) NECAB3 (ENSGGOG00000003584) ENSGGOG00000043692 ENSGGOG00000003578 SNTA1 (ENSGGOG00000008508) #21 ENSGGOG00000003253 #22 BPIFB1 (ENSGGOG00000003242) #23 BPIFA1 (ENSGGOG00000027809) #24 BPIFA3 (ENSGGOG00000023198) #25 ENSGGOG00000017163 #26 BPIFA2 (ENSGGOG00000017162) #27 BPIFB4 (ENSGGOG00000011742) #28 BPIFB3 (ENSGGOG00000010657) #29 BPIFB6 (ENSGGOG00000010638) #30 BPIFB2 (ENSGGOG00000010625) #31 SUN5 (ENSGGOG00000008288) #32 EFCAB8 (ENSGGOG00000000152) #33 ENSGGOG00000022496 #34 DNMT3B (ENSGGOG00000009533) #35 ENSGGOG00000026150 #36 ENSGGOG00000012789 Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00940000163568 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.c.a ENSGT00940000157601 ENSGT00940000154663.u ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00920000150801 Pan ANCESTRAL SPECIES 15 ENSGT00940000163568 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.cb.b.d ENSGT00940000157601 ENSGT00940000154663.u ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00410000028250 Bonobo MODERN SPECIES 11 ENSPPAG00000043799 ENSPPAG00000041601 ENSPPAG00000041611 ENSPPAG00000043449 RALY (ENSPPAG00000034951) CHMP4B (ENSPPAG00000028496) ENSPPAG00000037596 ZNF341 (ENSPPAG00000037384) PXMP4 (ENSPPAG00000028570) E2F1 (ENSPPAG00000025868) ACTL10 (ENSPPAG00000026624) C20orf144 (ENSPPAG00000042847) NECAB3 (ENSPPAG00000039394) CBFA2T2 (ENSPPAG00000042396) SNTA1 (ENSPPAG00000029137) #21 CDK5RAP1 (ENSPPAG00000008989) #22 BPIFB1 (ENSPPAG00000029535) #23 BPIFA1 (ENSPPAG00000034693) #24 BPIFA3 (ENSPPAG00000011914) #25 ENSPPAG00000041776 #26 BPIFA2 (ENSPPAG00000038731) #27 BPIFB4 (ENSPPAG00000042697) #28 BPIFB3 (ENSPPAG00000036747) #29 BPIFB6 (ENSPPAG00000019659) #30 BPIFB2 (ENSPPAG00000041501) #31 SUN5 (ENSPPAG00000029851) #32 EFCAB8 (ENSPPAG00000043457) #33 MAPRE1 (ENSPPAG00000025593) #34 DNMT3B (ENSPPAG00000034470) #35 COMMD7 (ENSPPAG00000038127) #36 ENSPPAG00000036278 Chimpanzee MODERN SPECIES 11 ASIP (ENSPTRG00000013413) ENSPTRG00000046065 ENSPTRG00000045368 EIF2S2 (ENSPTRG00000013412) RALY (ENSPTRG00000013410) CHMP4B (ENSPTRG00000013408) ENSPTRG00000045113 ZNF341 (ENSPTRG00000013406) PXMP4 (ENSPTRG00000013405) E2F1 (ENSPTRG00000013404) ENSPTRG00000047541 C20H20orf144 (ENSPTRG00000013403) NECAB3 (ENSPTRG00000013402) CBFA2T2 (ENSPTRG00000013401) SNTA1 (ENSPTRG00000013400) #21 CDK5RAP1 (ENSPTRG00000013399) #22 BPIFB1 (ENSPTRG00000013396) #23 BPIFA1 (ENSPTRG00000013395) #24 BPIFA3 (ENSPTRG00000013393) #25 ENSPTRG00000049909 #26 BPIFA2 (ENSPTRG00000013391) #27 BPIFB4 (ENSPTRG00000013390) #28 BPIFB3 (ENSPTRG00000022778) #29 BPIFB6 (ENSPTRG00000013388) #30 BPIFB2 (ENSPTRG00000013387) #31 SUN5 (ENSPTRG00000024395) #32 EFCAB8 (ENSPTRG00000034012) #33 MAPRE1 (ENSPTRG00000013385) #34 DNMT3B (ENSPTRG00000013384) #35 COMMD7 (ENSPTRG00000013383) #36 ENSPTRG00000030589 Human MODERN SPECIES 12 DYNLRB1 (ENSG00000125971) ITCH (ENSG00000078747) AHCY (ENSG00000101444) ASIP (ENSG00000101440) EIF2S2 (ENSG00000125977) RALY (ENSG00000125970) CHMP4B (ENSG00000101421) ZNF341 (ENSG00000131061) PXMP4 (ENSG00000101417) E2F1 (ENSG00000101412) ACTL10 (ENSG00000288649) C20orf144 (ENSG00000149609) NECAB3 (ENSG00000125967) CBFA2T2 (ENSG00000078699) SNTA1 (ENSG00000101400) #21 CDK5RAP1 (ENSG00000101391) #22 BPIFB1 (ENSG00000125999) #23 BPIFA1 (ENSG00000198183) #24 BPIFA3 (ENSG00000131059) #25 BPIFA2 (ENSG00000131050) #27 BPIFB4 (ENSG00000186191) #28 BPIFB3 (ENSG00000186190) #29 BPIFB6 (ENSG00000167104) #30 BPIFB2 (ENSG00000078898) #31 SUN5 (ENSG00000167098) #32 EFCAB8 (ENSG00000215529) #33 MAPRE1 (ENSG00000101367) #34 DNMT3B (ENSG00000088305) #35 COMMD7 (ENSG00000149600) #36 ENSG00000285382 C20orf203 (ENSG00000198547) Orangutan MODERN SPECIES 11 ITCH (ENSPPYG00000010936) AHCY (ENSPPYG00000010935) ENSPPYG00000010934 EIF2S2 (ENSPPYG00000010933) ENSPPYG00000010932 ENSPPYG00000041388 CHMP4B (ENSPPYG00000010931) ZNF341 (ENSPPYG00000010930) PXMP4 (ENSPPYG00000041080) E2F1 (ENSPPYG00000010929) ACTL10 (ENSPPYG00000010928) C20orf144 (ENSPPYG00000010927) NECAB3 (ENSPPYG00000010926) CBFA2T2 (ENSPPYG00000010925) SNTA1 (ENSPPYG00000010924) #21 CDK5RAP1 (ENSPPYG00000010923) #22 BPIFB1 (ENSPPYG00000010919) #23 BPIFA1 (ENSPPYG00000010918) #24 BPIFA3 (ENSPPYG00000010917) #25 BPIFA2 (ENSPPYG00000010915) #27 ENSPPYG00000011281 #28 BPIFB3 (ENSPPYG00000011280) #29 BPIFB6 (ENSPPYG00000011279) #30 BPIFB2 (ENSPPYG00000011278) #31 SUN5 (ENSPPYG00000010914) #32 EFCAB8 (ENSPPYG00000032398) #33 ENSPPYG00000035142 MAPRE1 (ENSPPYG00000032390) #34 DNMT3B (ENSPPYG00000010911) #35 COMMD7 (ENSPPYG00000010910) #36 C20orf203 (ENSPPYG00000010909) Gibbon MODERN SPECIES 3 ITCH (ENSNLEG00000010045) ENSNLEG00000030506 ENSNLEG00000010041 ENSNLEG00000028939 EIF2S2 (ENSNLEG00000010034) ENSNLEG00000010031 ENSNLEG00000035552 CHMP4B (ENSNLEG00000010020) ZNF341 (ENSNLEG00000010013) ENSNLEG00000029978 E2F1 (ENSNLEG00000010009) ENSNLEG00000009989 C20orf144 (ENSNLEG00000010006) CBFA2T2 (ENSNLEG00000009976) SNTA1 (ENSNLEG00000009970) #21 CDK5RAP1 (ENSNLEG00000009942) #22 BPIFB1 (ENSNLEG00000009918) #23 ENSNLEG00000009915 #24 BPIFA3 (ENSNLEG00000009907) #25 ENSNLEG00000032607 #26 BPIFA2 (ENSNLEG00000009895) #27 BPIFB4 (ENSNLEG00000009889) #28 BPIFB3 (ENSNLEG00000009874) #29 BPIFB6 (ENSNLEG00000009863) #30 BPIFB2 (ENSNLEG00000009854) #31 SUN5 (ENSNLEG00000009839) #32 MAPRE1 (ENSNLEG00000009828) #34 DNMT3B (ENSNLEG00000009819) #35 ENSNLEG00000033204 #36 ENSNLEG00000009815 ASXL1 (ENSNLEG00000009794) Platyrrhini ANCESTRAL SPECIES 11 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.dc.b ENSGT00940000154258.a ENSGT00390000001804.cb.a ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Cebidae ANCESTRAL SPECIES 13 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.dc.b ENSGT00940000154258.a ENSGT00390000001804.cb.a.c ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Marmoset MODERN SPECIES 17 ENSCJAG00000047561 ENSCJAG00000084324 AHCY (ENSCJAG00000018303) ASIP (ENSCJAG00000018327) ENSCJAG00000018334 ENSCJAG00000018361 CHMP4B (ENSCJAG00000018397) ZNF341 (ENSCJAG00000018423) PXMP4 (ENSCJAG00000080526) E2F1 (ENSCJAG00000018451) NECAB3 (ENSCJAG00000018455) ACTL10 (ENSCJAG00000058257) CBFA2T2 (ENSCJAG00000018475) ENSCJAG00000071493 SNTA1 (ENSCJAG00000046751) #21 CDK5RAP1 (ENSCJAG00000018500) #22 ENSCJAG00000074490 BPIFB1 (ENSCJAG00000018531) #23 BPIFA1 (ENSCJAG00000018547) #24 BPIFA3 (ENSCJAG00000018565) #25 BPIFA2 (ENSCJAG00000018544) #27 BPIFB4 (ENSCJAG00000034914) #28 BPIFB3 (ENSCJAG00000018580) #29 BPIFB6 (ENSCJAG00000018589) #30 BPIFB2 (ENSCJAG00000018598) #31 SUN5 (ENSCJAG00000018611) #32 EFCAB8 (ENSCJAG00000083357) #33 ENSCJAG00000015601 #34 DNMT3B (ENSCJAG00000015617) #35 ENSCJAG00000072168 COMMD7 (ENSCJAG00000038577) #36 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a.dc.b ENSGT00940000154258.a ENSGT00390000001804.cb.a.c ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 Bolivian squirrel monkey MODERN SPECIES 89 ENSSBOG00000034562 ITCH (ENSSBOG00000028570) AHCY (ENSSBOG00000018930) ENSSBOG00000035159 ENSSBOG00000020845 RALY (ENSSBOG00000001418) CHMP4B (ENSSBOG00000030524) ZNF341 (ENSSBOG00000026329) PXMP4 (ENSSBOG00000005223) E2F1 (ENSSBOG00000028962) NECAB3 (ENSSBOG00000036045) ACTL10 (ENSSBOG00000004671) C20orf144 (ENSSBOG00000026299) CBFA2T2 (ENSSBOG00000029834) SNTA1 (ENSSBOG00000020201) #21 CDK5RAP1 (ENSSBOG00000034885) #22 BPIFB1 (ENSSBOG00000023508) #23 BPIFA1 (ENSSBOG00000033533) #24 BPIFA3 (ENSSBOG00000031059) #25 ENSSBOG00000035555 #26 BPIFA2 (ENSSBOG00000031635) #27 BPIFB4 (ENSSBOG00000034867) #28 BPIFB3 (ENSSBOG00000035285) #29 BPIFB6 (ENSSBOG00000015194) #30 BPIFB2 (ENSSBOG00000023467) #31 SUN5 (ENSSBOG00000036230) #32 EFCAB8 (ENSSBOG00000035195) #33 MAPRE1 (ENSSBOG00000026959) #34 DNMT3B (ENSSBOG00000030711) #35 NOL4L (ENSSBOG00000020030) ASXL1 (ENSSBOG00000023781) Capuchin MODERN SPECIES 18 ENSCCAG00000036415 ASIP (ENSCCAG00000034213) ENSCCAG00000035446 RALY (ENSCCAG00000024548) CHMP4B (ENSCCAG00000035412) ZNF341 (ENSCCAG00000022663) PXMP4 (ENSCCAG00000023929) E2F1 (ENSCCAG00000031862) NECAB3 (ENSCCAG00000025337) ACTL10 (ENSCCAG00000020021) C20orf144 (ENSCCAG00000001393) CBFA2T2 (ENSCCAG00000030202) ENSCCAG00000020608 ENSCCAG00000023290 SNTA1 (ENSCCAG00000037245) #21 CDK5RAP1 (ENSCCAG00000031228) #22 BPIFB1 (ENSCCAG00000015758) #23 BPIFA1 (ENSCCAG00000021907) #24 BPIFA3 (ENSCCAG00000022344) #25 ENSCCAG00000034919 ##23 BPIFA2 (ENSCCAG00000021755) #27 BPIFB4 (ENSCCAG00000027553) #28 BPIFB3 (ENSCCAG00000022192) #29 BPIFB6 (ENSCCAG00000030049) #30 BPIFB2 (ENSCCAG00000030652) #31 SUN5 (ENSCCAG00000034764) #32 EFCAB8 (ENSCCAG00000022910) #33 MAPRE1 (ENSCCAG00000030764) #34 ENSCCAG00000020225 #35 COMMD7 (ENSCCAG00000031234) #36 NOL4L (ENSCCAG00000028160) Mas night monkey MODERN SPECIES 1017 ITCH (ENSANAG00000027856) ENSANAG00000014301 ENSANAG00000033573 ASIP (ENSANAG00000030668) ENSANAG00000022839 RALY (ENSANAG00000019376) CHMP4B (ENSANAG00000023014) ZNF341 (ENSANAG00000023240) PXMP4 (ENSANAG00000031512) E2F1 (ENSANAG00000029428) C20orf144 (ENSANAG00000028577) NECAB3 (ENSANAG00000024109) CBFA2T2 (ENSANAG00000029831) ENSANAG00000022327 SNTA1 (ENSANAG00000021276) #21 CDK5RAP1 (ENSANAG00000036607) #22 BPIFB1 (ENSANAG00000024111) #23 BPIFA1 (ENSANAG00000023955) #24 BPIFA3 (ENSANAG00000029660) #25 ENSANAG00000026946 #26 BPIFA2 (ENSANAG00000020124) #27 BPIFB4 (ENSANAG00000021575) #28 BPIFB3 (ENSANAG00000005106) #29 BPIFB6 (ENSANAG00000034061) #30 BPIFB2 (ENSANAG00000023925) #31 SUN5 (ENSANAG00000026404) #32 EFCAB8 (ENSANAG00000029449) #33 MAPRE1 (ENSANAG00000035566) #34 ENSANAG00000025386 #35 COMMD7 (ENSANAG00000007345) #36 NOL4L (ENSANAG00000033711) Tarsier MODERN SPECIES 4029 SNTA1 (ENSTSYG00000031328) #21 CDK5RAP1 (ENSTSYG00000013061) #22 BPIFB1 (ENSTSYG00000028664) #23 BPIFA1 (ENSTSYG00000013665) #24 BPIFA3 (ENSTSYG00000034882) #25 BPIFA2 (ENSTSYG00000036461) #27 BPIFB4 (ENSTSYG00000036167) #28 BPIFB3 (ENSTSYG00000007131) #29 BPIFB6 (ENSTSYG00000026610) #30 BPIFB2 (ENSTSYG00000030972) #31 SUN5 (ENSTSYG00000009982) #32 Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 Lemuriformes ANCESTRAL SPECIES 10 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Lemuriformes_a ANCESTRAL SPECIES 26 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Greater bamboo lemur MODERN SPECIES 98 ENSPSMG00000018498 ITCH (ENSPSMG00000018448) AHCY (ENSPSMG00000018371) ASIP (ENSPSMG00000018334) EIF2S2 (ENSPSMG00000018322) RALY (ENSPSMG00000018249) CHMP4B (ENSPSMG00000018182) ZNF341 (ENSPSMG00000018155) PXMP4 (ENSPSMG00000018104) E2F1 (ENSPSMG00000018083) ACTL10 (ENSPSMG00000018073) ENSPSMG00000018069 NECAB3 (ENSPSMG00000018052) CBFA2T2 (ENSPSMG00000017990) SNTA1 (ENSPSMG00000017942) #21 ENSPSMG00000017928 #22 Coquerels sifaka MODERN SPECIES 126 ENSPCOG00000023647 AHCY (ENSPCOG00000028404) ASIP (ENSPCOG00000010026) ENSPCOG00000016748 ENSPCOG00000016432 EIF2S2 (ENSPCOG00000023384) RALY (ENSPCOG00000016363) CHMP4B (ENSPCOG00000019410) ZNF341 (ENSPCOG00000023267) PXMP4 (ENSPCOG00000024717) E2F1 (ENSPCOG00000020987) NECAB3 (ENSPCOG00000028089) ENSPCOG00000016999 CBFA2T2 (ENSPCOG00000018468) SNTA1 (ENSPCOG00000027507) #21 CDK5RAP1 (ENSPCOG00000024202) #22 BPIFB1 (ENSPCOG00000028115) #23 BPIFA1 (ENSPCOG00000015572) #24 BPIFA2 (ENSPCOG00000020981) #27 BPIFB4 (ENSPCOG00000014355) #28 BPIFB3 (ENSPCOG00000002263) #29 BPIFB6 (ENSPCOG00000019939) #30 BPIFB2 (ENSPCOG00000024187) #31 SUN5 (ENSPCOG00000021842) #32 EFCAB8 (ENSPCOG00000003137) #33 MAPRE1 (ENSPCOG00000011361) #34 ENSPCOG00000011905 DNMT3B (ENSPCOG00000025216) #35 ENSPCOG00000021565 #36 NOL4L (ENSPCOG00000013169) ASXL1 (ENSPCOG00000020621) Mouse lemur MODERN SPECIES 9 DYNLRB1 (ENSMICG00000003253) ITCH (ENSMICG00000003238) ENSMICG00000034345 ENSMICG00000032740 AHCY (ENSMICG00000003232) ASIP (ENSMICG00000044506) ENSMICG00000006944 RALY (ENSMICG00000039074) ENSMICG00000042802 ZNF341 (ENSMICG00000047832) ENSMICG00000028174 E2F1 (ENSMICG00000006921) NECAB3 (ENSMICG00000006906) ENSMICG00000006895 SNTA1 (ENSMICG00000004936) #21 CDK5RAP1 (ENSMICG00000004382) #22 BPIFB1 (ENSMICG00000004357) #23 BPIFA1 (ENSMICG00000004348) #24 BPIFA2 (ENSMICG00000013403) #27 BPIFB4 (ENSMICG00000026403) #28 BPIFB3 (ENSMICG00000001990) #29 BPIFB6 (ENSMICG00000001984) #30 BPIFB2 (ENSMICG00000001979) #31 SUN5 (ENSMICG00000001971) #32 EFCAB8 (ENSMICG00000036641) #33 MAPRE1 (ENSMICG00000047719) #34 DNMT3B (ENSMICG00000006679) #35 COMMD7 (ENSMICG00000006672) #36 NOL4L (ENSMICG00000006651) ASXL1 (ENSMICG00000038277) KIF3B (ENSMICG00000015964) Bushbaby MODERN SPECIES 140 ENSOGAG00000016802 ITCH (ENSOGAG00000016792) AHCY (ENSOGAG00000016787) ENSOGAG00000001417 RALY (ENSOGAG00000032337) ENSOGAG00000013532 CHMP4B (ENSOGAG00000010444) ZNF341 (ENSOGAG00000010441) PXMP4 (ENSOGAG00000010440) E2F1 (ENSOGAG00000024304) ACTL10 (ENSOGAG00000010438) NECAB3 (ENSOGAG00000028758) CBFA2T2 (ENSOGAG00000015051) ENSOGAG00000032821 SNTA1 (ENSOGAG00000027133) #21 CDK5RAP1 (ENSOGAG00000010764) #22 ENSOGAG00000010760 ENSOGAG00000024646 ##23 BPIFB1 (ENSOGAG00000010753) #23 BPIFA1 (ENSOGAG00000010750) #24 BPIFA2 (ENSOGAG00000010742) #27 ENSOGAG00000027213 BPIFB4 (ENSOGAG00000010737) #28 BPIFB3 (ENSOGAG00000015673) #29 BPIFB6 (ENSOGAG00000015669) #30 BPIFB2 (ENSOGAG00000015664) #31 SUN5 (ENSOGAG00000015660) #32 ENSOGAG00000026557 #34 DNMT3B (ENSOGAG00000004720) #35 COMMD7 (ENSOGAG00000004718) #36 ENSOGAG00000026973 Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 Tree shrew MODERN SPECIES 1365 SNTA1 (ENSTBEG00000006415) #21 CDK5RAP1 (ENSTBEG00000006040) #22 ENSTBEG00000005761 ENSTBEG00000005479 BPIFB1 (ENSTBEG00000003648) #23 BPIFA1 (ENSTBEG00000003115) #24 ENSTBEG00000001858 ENSTBEG00000001404 #26 ENSTBEG00000000864 Glires ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 Rodentia ANCESTRAL SPECIES 18 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 Myomorpha ANCESTRAL SPECIES 9 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 Muroidea ANCESTRAL SPECIES 7 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 Cricetidae ANCESTRAL SPECIES 5 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.y.b ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928.l #35 Chinese hamster chok1gshd MODERN SPECIES 188 Itch (ENSCGRG00001020207) ENSCGRG00001012673 a (ENSCGRG00001021768) ENSCGRG00001004778 ENSCGRG00001001614 Raly (ENSCGRG00001014652) Chmp4b (ENSCGRG00001000652) Zfp341 (ENSCGRG00001014101) Pxmp4 (ENSCGRG00001010342) E2f1 (ENSCGRG00001001729) Necab3 (ENSCGRG00001013760) Actl10 (ENSCGRG00001006945) 1700003F12Rik (ENSCGRG00001012971) Cbfa2t2 (ENSCGRG00001014529) Snta1 (ENSCGRG00001016422) #21 Cdk5rap1 (ENSCGRG00001020687) #22 ENSCGRG00001018519 ENSCGRG00001021876 Bpifb5 (ENSCGRG00001022241) ##23 Bpifb1 (ENSCGRG00001022649) #23 Bpifa5 (ENSCGRG00001018207) #24 Bpifa1 (ENSCGRG00001014265) #24 Bpifa3 (ENSCGRG00001017514) #25 Bpifa2 (ENSCGRG00001020519) #27 Bpifa6 (ENSCGRG00001023934) Bpifb4 (ENSCGRG00001014345) #28 Bpifb3 (ENSCGRG00001020775) #29 Bpifb6 (ENSCGRG00001023599) #30 Bpifb2 (ENSCGRG00001009296) #31 Sun5 (ENSCGRG00001017538) #32 Mapre1 (ENSCGRG00001005061) #34 Golden Hamster MODERN SPECIES 791 Pigu (ENSMAUG00000012275) Dynlrb1 (ENSMAUG00000019405) Itch (ENSMAUG00000001009) ENSMAUG00000006591 a (ENSMAUG00000021663) ENSMAUG00000009771 Raly (ENSMAUG00000005739) Chmp4b (ENSMAUG00000020158) Zfp341 (ENSMAUG00000011481) Pxmp4 (ENSMAUG00000015504) E2f1 (ENSMAUG00000000913) Necab3 (ENSMAUG00000015672) 1700003F12Rik (ENSMAUG00000022072) Cbfa2t2 (ENSMAUG00000001412) Snta1 (ENSMAUG00000013984) #21 Cdk5rap1 (ENSMAUG00000000980) #22 Bpifb5 (ENSMAUG00000008139) ##23 Bpifb1 (ENSMAUG00000011247) #23 Bpifa5 (ENSMAUG00000012713) #24 Bpifa1 (ENSMAUG00000014646) #24 Bpifa3 (ENSMAUG00000013387) #25 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 Prairie vole MODERN SPECIES 357 Dynlrb1 (ENSMOCG00000001553) Itch (ENSMOCG00000015148) ENSMOCG00000021599 a (ENSMOCG00000006735) Eif2s2 (ENSMOCG00000012809) Raly (ENSMOCG00000009450) ENSMOCG00000017228 Chmp4b (ENSMOCG00000022208) Zfp341 (ENSMOCG00000004075) Pxmp4 (ENSMOCG00000003745) E2f1 (ENSMOCG00000012464) Necab3 (ENSMOCG00000000497) 1700003F12Rik (ENSMOCG00000019597) Cbfa2t2 (ENSMOCG00000015541) Snta1 (ENSMOCG00000005630) #21 Cdk5rap1 (ENSMOCG00000002846) #22 Bpifb5 (ENSMOCG00000002643) ##23 Bpifb1 (ENSMOCG00000011657) #23 Bpifa5 (ENSMOCG00000015053) #24 Bpifa1 (ENSMOCG00000022067) #24 Bpifa3 (ENSMOCG00000007021) #25 Bpifa2 (ENSMOCG00000020017) #27 Bpifa6 (ENSMOCG00000013390) Nsfl1c (ENSMOCG00000002492) Fkbp1a (ENSMOCG00000015631) Sdcbp2 (ENSMOCG00000018189) Snph (ENSMOCG00000019255) Rad21l (ENSMOCG00000001417) Tmem74b (ENSMOCG00000012931) Psmf1 (ENSMOCG00000017241) Rspo4 (ENSMOCG00000008564) Northern American deer mouse MODERN SPECIES 17 Itch (ENSPEMG00000021623) ENSPEMG00000024071 a (ENSPEMG00000023599) Eif2s2 (ENSPEMG00000023172) Raly (ENSPEMG00000021466) Chmp4b (ENSPEMG00000021658) Zfp341 (ENSPEMG00000022506) Pxmp4 (ENSPEMG00000023523) E2f1 (ENSPEMG00000018049) Actl10 (ENSPEMG00000026578) 1700003F12Rik (ENSPEMG00000031171) Necab3 (ENSPEMG00000011260) Cbfa2t2 (ENSPEMG00000023470) ENSPEMG00000030394 Snta1 (ENSPEMG00000003510) #21 Cdk5rap1 (ENSPEMG00000017045) #22 ENSPEMG00000011960 Bpifb5 (ENSPEMG00000007792) ##23 Bpifb1 (ENSPEMG00000018971) #23 Bpifa5 (ENSPEMG00000011773) #24 Bpifa1 (ENSPEMG00000014511) #24 Bpifa3 (ENSPEMG00000008523) #25 ENSPEMG00000028840 ENSPEMG00000027075 Bpifa2 (ENSPEMG00000015949) #27 Bpifa6 (ENSPEMG00000016037) Bpifb4 (ENSPEMG00000008153) #28 Bpifb3 (ENSPEMG00000016514) #29 Bpifb6 (ENSPEMG00000009388) #30 Bpifb2 (ENSPEMG00000001773) #31 Sun5 (ENSPEMG00000019207) #32 Murinae ANCESTRAL SPECIES 1 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00940000171996 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 Mus ANCESTRAL SPECIES 1 ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 Mus_A ANCESTRAL SPECIES ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 Mus_C ANCESTRAL SPECIES ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00860000136314 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a.d #24 ENSGT01100000263546.d.b.a.a.a.a.c #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928.k #35 Steppe mouse MODERN SPECIES 27 a (ENSMSIG00000001870) Eif2s2 (ENSMSIG00000001803) Raly (ENSMSIG00000001654) ENSMSIG00000001612 Chmp4b (ENSMSIG00000001595) Zfp341 (ENSMSIG00000001480) ENSMSIG00000001473 Pxmp4 (ENSMSIG00000001438) E2f1 (ENSMSIG00000001395) Actl10 (ENSMSIG00000001387) 1700003F12Rik (ENSMSIG00000001368) Necab3 (ENSMSIG00000001205) Cbfa2t2 (ENSMSIG00000001148) ENSMSIG00000001135 Snta1 (ENSMSIG00000001125) #21 Cdk5rap1 (ENSMSIG00000001010) #22 spretus MODERN SPECIES 11 MGP_SPRETEiJ_G0025444 Eif2s2 (MGP_SPRETEiJ_G0025443) a (MGP_SPRETEiJ_G0025442) Raly (MGP_SPRETEiJ_G0025441) MGP_SPRETEiJ_G0025440 Chmp4b (MGP_SPRETEiJ_G0025439) MGP_SPRETEiJ_G0025438 MGP_SPRETEiJ_G0025437 Pxmp4 (MGP_SPRETEiJ_G0025436) E2f1 (MGP_SPRETEiJ_G0025435) Actl10 (MGP_SPRETEiJ_G0025434) 1700003F12Rik (MGP_SPRETEiJ_G0025433) Necab3 (MGP_SPRETEiJ_G0025432) Cbfa2t2 (MGP_SPRETEiJ_G0025431) Snta1 (MGP_SPRETEiJ_G0025430) #21 Cdk5rap1 (MGP_SPRETEiJ_G0025429) #22 MGP_SPRETEiJ_G0025428 MGP_SPRETEiJ_G0025427 Bpifb5 (MGP_SPRETEiJ_G0025426) ##23 Bpifb1 (MGP_SPRETEiJ_G0025425) #23 Bpifa5 (MGP_SPRETEiJ_G0025424) #24 Bpifa1 (MGP_SPRETEiJ_G0025423) #24 Bpifa3 (MGP_SPRETEiJ_G0025422) #25 Bpifa2 (MGP_SPRETEiJ_G0025421) #27 Bpifa6 (MGP_SPRETEiJ_G0025420) MGP_SPRETEiJ_G0025419 #28 Bpifb3 (MGP_SPRETEiJ_G0025418) #29 Bpifb6 (MGP_SPRETEiJ_G0025417) #30 Bpifb2 (MGP_SPRETEiJ_G0025416) #31 Sun5 (MGP_SPRETEiJ_G0025415) #32 Mapre1 (MGP_SPRETEiJ_G0025413) #34 Mouse MODERN SPECIES 11 Dynlrb1 (ENSMUSG00000047459) Itch (ENSMUSG00000027598) Ahcy (ENSMUSG00000027597) Eif2s2 (ENSMUSG00000074656) a (ENSMUSG00000027596) Raly (ENSMUSG00000027593) Chmp4b (ENSMUSG00000038467) Zfp341 (ENSMUSG00000059842) Pxmp4 (ENSMUSG00000000876) E2f1 (ENSMUSG00000027490) Actl10 (ENSMUSG00000078129) 1700003F12Rik (ENSMUSG00000038523) Necab3 (ENSMUSG00000027489) Cbfa2t2 (ENSMUSG00000038533) Snta1 (ENSMUSG00000027488) #21 Cdk5rap1 (ENSMUSG00000027487) #22 Bpifb9b (ENSMUSG00000067996) Bpifb9a (ENSMUSG00000067998) Bpifb5 (ENSMUSG00000038572) ##23 Bpifb1 (ENSMUSG00000027485) #23 Bpifa5 (ENSMUSG00000027484) #24 Bpifa1 (ENSMUSG00000027483) #24 Bpifa3 (ENSMUSG00000027482) #25 Bpifa2 (ENSMUSG00000042459) #27 Bpifa6 (ENSMUSG00000078998) Bpifb4 (ENSMUSG00000074665) #28 Bpifb3 (ENSMUSG00000068008) #29 Bpifb6 (ENSMUSG00000068009) #30 Bpifb2 (ENSMUSG00000027481) #31 Sun5 (ENSMUSG00000027480) #32 Efcab8 (ENSMUSG00000044083) #33 Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0024522 Eif2s2 (MGP_CAROLIEiJ_G0024521) a (MGP_CAROLIEiJ_G0024520) Raly (MGP_CAROLIEiJ_G0024519) MGP_CAROLIEiJ_G0024518 Chmp4b (MGP_CAROLIEiJ_G0024517) Zfp341 (MGP_CAROLIEiJ_G0024516) MGP_CAROLIEiJ_G0024515 Pxmp4 (MGP_CAROLIEiJ_G0024514) E2f1 (MGP_CAROLIEiJ_G0024513) Actl10 (MGP_CAROLIEiJ_G0024512) 1700003F12Rik (MGP_CAROLIEiJ_G0024511) Necab3 (MGP_CAROLIEiJ_G0024510) Cbfa2t2 (MGP_CAROLIEiJ_G0024509) Snta1 (MGP_CAROLIEiJ_G0024508) #21 MGP_CAROLIEiJ_G0024507 #22 Bpifb5 (MGP_CAROLIEiJ_G0024505) ##23 Bpifb1 (MGP_CAROLIEiJ_G0024504) #23 Bpifa5 (MGP_CAROLIEiJ_G0024503) #24 Bpifa1 (MGP_CAROLIEiJ_G0024502) #24 Bpifa3 (MGP_CAROLIEiJ_G0024501) #25 Bpifa2 (MGP_CAROLIEiJ_G0024500) #27 Bpifa6 (MGP_CAROLIEiJ_G0024499) MGP_CAROLIEiJ_G0024498 #28 Bpifb3 (MGP_CAROLIEiJ_G0024497) #29 MGP_CAROLIEiJ_G0024496 #30 Bpifb2 (MGP_CAROLIEiJ_G0024495) #31 Sun5 (MGP_CAROLIEiJ_G0024494) #32 MGP_CAROLIEiJ_G0024493 #33 Mapre1 (MGP_CAROLIEiJ_G0024492) #34 Dnmt3b (MGP_CAROLIEiJ_G0024491) #35 Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025966 Eif2s2 (MGP_PahariEiJ_G0025965) a (MGP_PahariEiJ_G0025964) Raly (MGP_PahariEiJ_G0025963) MGP_PahariEiJ_G0025962 Chmp4b (MGP_PahariEiJ_G0025961) Zfp341 (MGP_PahariEiJ_G0025960) MGP_PahariEiJ_G0025959 Pxmp4 (MGP_PahariEiJ_G0025958) E2f1 (MGP_PahariEiJ_G0025957) Actl10 (MGP_PahariEiJ_G0025956) 1700003F12Rik (MGP_PahariEiJ_G0025955) Necab3 (MGP_PahariEiJ_G0025954) Cbfa2t2 (MGP_PahariEiJ_G0025953) Snta1 (MGP_PahariEiJ_G0025952) #21 Cdk5rap1 (MGP_PahariEiJ_G0025951) #22 Bpifb5 (MGP_PahariEiJ_G0025949) ##23 Bpifb1 (MGP_PahariEiJ_G0025948) #23 Bpifa5 (MGP_PahariEiJ_G0025947) #24 Bpifa1 (MGP_PahariEiJ_G0025946) #24 Bpifa3 (MGP_PahariEiJ_G0025945) #25 MGP_PahariEiJ_G0025944 MGP_PahariEiJ_G0025943 #27 Bpifa6 (MGP_PahariEiJ_G0025942) MGP_PahariEiJ_G0025941 #28 Bpifb3 (MGP_PahariEiJ_G0025940) #29 Bpifb6 (MGP_PahariEiJ_G0025939) #30 Bpifb2 (MGP_PahariEiJ_G0025938) #31 Sun5 (MGP_PahariEiJ_G0025937) #32 MGP_PahariEiJ_G0025936 #33 Mapre1 (MGP_PahariEiJ_G0025935) #34 Rat MODERN SPECIES 13 Eif2s2 (ENSRNOG00000017447) Raly (ENSRNOG00000017405) LOC690597 (ENSRNOG00000055182) Chmp4b (ENSRNOG00000046585) AABR07054368.1 (ENSRNOG00000029996) ENSRNOG00000063087 Zfp341 (ENSRNOG00000017086) Pxmp4 (ENSRNOG00000016975) Actl10 (ENSRNOG00000036864) RGD1561517 (ENSRNOG00000016583) E2f1 (ENSRNOG00000016708) AABR07054362.1 (ENSRNOG00000050899) Sms-ps2 (ENSRNOG00000031275) Cbfa2t2 (ENSRNOG00000016352) Snta1 (ENSRNOG00000016062) #21 ENSRNOG00000064935 #22 LOC690507 (ENSRNOG00000015637) Bpifb5 (ENSRNOG00000025238) ##23 Bpifb1 (ENSRNOG00000015468) #23 Bpifa5 (ENSRNOG00000013908) #24 Bpifa1 (ENSRNOG00000013859) #24 Bpifa3 (ENSRNOG00000013778) #25 Bpifa2f (ENSRNOG00000036870) Bpifa2 (ENSRNOG00000013540) #27 Bpifa6 (ENSRNOG00000043258) Bpifb3 (ENSRNOG00000034174) #28 Bpifb6 (ENSRNOG00000013371) #30 Bpifb2 (ENSRNOG00000012197) #31 Sun5 (ENSRNOG00000027221) #32 Efcab8 (ENSRNOG00000070431) #33 Mapre1 (ENSRNOG00000011798) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 1287 Snta1 (ENSNGAG00000014553) #21 Cdk5rap1 (ENSNGAG00000016976) #22 Kangaroo rat MODERN SPECIES 332 Pigu (ENSDORG00000001715) ENSDORG00000029351 Dynlrb1 (ENSDORG00000028607) Itch (ENSDORG00000027257) ENSDORG00000012590 a (ENSDORG00000013768) Eif2s2 (ENSDORG00000001920) Raly (ENSDORG00000013400) Chmp4b (ENSDORG00000011539) Zfp341 (ENSDORG00000000005) Pxmp4 (ENSDORG00000030129) E2f1 (ENSDORG00000013793) Necab3 (ENSDORG00000013792) Cbfa2t2 (ENSDORG00000001656) Snta1 (ENSDORG00000029237) #21 Cdk5rap1 (ENSDORG00000004622) #22 Bpifb5 (ENSDORG00000028380) ##23 Bpifb1 (ENSDORG00000002282) #23 ENSDORG00000002276 #24 Bpifa3 (ENSDORG00000002275) #25 Bpifb4 (ENSDORG00000001190) #28 Bpifb3 (ENSDORG00000029748) #29 Bpifb6 (ENSDORG00000004324) #30 Bpifb2 (ENSDORG00000004323) #31 Mapre1 (ENSDORG00000023413) #34 ENSDORG00000012834 #35 Commd7 (ENSDORG00000002116) #36 Nol4l (ENSDORG00000027893) ENSDORG00000028887 ENSDORG00000016544 Pofut1 (ENSDORG00000003323) Rodentia_A ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00900000143329 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 Hystricomorpha_b ANCESTRAL SPECIES 16 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a.i.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 Long-tailed chinchilla MODERN SPECIES 129 DYNLRB1 (ENSCLAG00000016878) ITCH (ENSCLAG00000016997) AHCY (ENSCLAG00000017278) ASIP (ENSCLAG00000017188) ENSCLAG00000017263 RALY (ENSCLAG00000016899) CHMP4B (ENSCLAG00000017205) ZNF341 (ENSCLAG00000016902) PXMP4 (ENSCLAG00000017245) E2F1 (ENSCLAG00000017077) NECAB3 (ENSCLAG00000017054) ACTL10 (ENSCLAG00000018112) ENSCLAG00000017072 CBFA2T2 (ENSCLAG00000017277) SNTA1 (ENSCLAG00000015283) #21 CDK5RAP1 (ENSCLAG00000015460) #22 BPIFB1 (ENSCLAG00000016830) #23 BPIFA1 (ENSCLAG00000017206) #24 BPIFA3 (ENSCLAG00000016843) #25 BPIFB4 (ENSCLAG00000016722) #28 BPIFB3 (ENSCLAG00000016914) #29 BPIFB6 (ENSCLAG00000016956) #30 BPIFB2 (ENSCLAG00000017195) #31 SUN5 (ENSCLAG00000017254) #32 ENSCLAG00000017109 #34 DNMT3B (ENSCLAG00000017043) #35 COMMD7 (ENSCLAG00000017227) #36 NOL4L (ENSCLAG00000017265) ASXL1 (ENSCLAG00000017264) KIF3B (ENSCLAG00000016984) POFUT1 (ENSCLAG00000017267) Degu MODERN SPECIES 78 ENSODEG00000020169 ENSODEG00000015189 ENSODEG00000012943 ENSODEG00000012151 ENSODEG00000012831 ENSODEG00000012366 ZNF341 (ENSODEG00000013884) PXMP4 (ENSODEG00000015173) E2F1 (ENSODEG00000012327) ENSODEG00000013210 NECAB3 (ENSODEG00000012739) ENSODEG00000013862 CBFA2T2 (ENSODEG00000012562) ENSODEG00000019960 SNTA1 (ENSODEG00000012817) #21 CDK5RAP1 (ENSODEG00000013190) #22 BPIFB1 (ENSODEG00000012392) #23 BPIFA1 (ENSODEG00000011803) #24 BPIFA3 (ENSODEG00000011797) #25 ENSODEG00000013174 ENSODEG00000012886 ENSODEG00000012670 BPIFB4 (ENSODEG00000013037) #28 BPIFB3 (ENSODEG00000012502) #29 BPIFB6 (ENSODEG00000011706) #30 BPIFB2 (ENSODEG00000012498) #31 SUN5 (ENSODEG00000012284) #32 ENSODEG00000012036 #34 DNMT3B (ENSODEG00000011753) #35 COMMD7 (ENSODEG00000014983) #36 NOL4L (ENSODEG00000012307) Guinea pig MODERN SPECIES 45 PIGU (ENSCPOG00000013806) DYNLRB1 (ENSCPOG00000013798) ITCH (ENSCPOG00000013787) AHCY (ENSCPOG00000014740) ASIP (ENSCPOG00000005139) EIF2S2 (ENSCPOG00000040226) RALY (ENSCPOG00000000309) CHMP4B (ENSCPOG00000035794) ZNF341 (ENSCPOG00000003820) PXMP4 (ENSCPOG00000024804) E2F1 (ENSCPOG00000001800) ENSCPOG00000022109 NECAB3 (ENSCPOG00000020859) CBFA2T2 (ENSCPOG00000001721) SNTA1 (ENSCPOG00000005179) #21 CDK5RAP1 (ENSCPOG00000006663) #22 BPIFB1 (ENSCPOG00000005568) #23 BPIFA1 (ENSCPOG00000014220) #24 ENSCPOG00000013128 #25 Naked mole-rat female MODERN SPECIES 6 AHCY (ENSHGLG00000009751) ENSHGLG00000031940 RALY (ENSHGLG00000017779) ENSHGLG00000042490 ENSHGLG00000032344 ENSHGLG00000041357 ZNF341 (ENSHGLG00000013786) PXMP4 (ENSHGLG00000016991) ENSHGLG00000041428 E2F1 (ENSHGLG00000009301) ENSHGLG00000009659 CBFA2T2 (ENSHGLG00000018266) ENSHGLG00000047164 ENSHGLG00000018147 SNTA1 (ENSHGLG00000006583) #21 CDK5RAP1 (ENSHGLG00000005146) #22 ENSHGLG00000039669 Sciuridae ANCESTRAL SPECIES 13 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.l #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00900000143329 Marmotini ANCESTRAL SPECIES 5 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.l #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00900000143329 Marmotini_b ANCESTRAL SPECIES 29 ENSGT00390000011067.A.o.b ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 Arctic ground squirrel MODERN SPECIES 24 DYNLRB1 (ENSUPAG00010004657) ITCH (ENSUPAG00010004671) AHCY (ENSUPAG00010004706) ASIP (ENSUPAG00010004712) EIF2S2 (ENSUPAG00010004723) RALY (ENSUPAG00010004731) CHMP4B (ENSUPAG00010004793) ZNF341 (ENSUPAG00010004795) PXMP4 (ENSUPAG00010004822) E2F1 (ENSUPAG00010004824) NECAB3 (ENSUPAG00010004839) ACTL10 (ENSUPAG00010004872) C20orf144 (ENSUPAG00010004879) CBFA2T2 (ENSUPAG00010004884) SNTA1 (ENSUPAG00010004904) #21 CDK5RAP1 (ENSUPAG00010004922) #22 ENSUPAG00010004995 ENSUPAG00010004998 ##23 ENSUPAG00010005007 #23 Squirrel MODERN SPECIES 161 MAP1LC3A (ENSSTOG00000006158) ENSSTOG00000014820 ITCH (ENSSTOG00000014804) AHCY (ENSSTOG00000003013) ASIP (ENSSTOG00000003501) EIF2S2 (ENSSTOG00000008821) RALY (ENSSTOG00000008810) CHMP4B (ENSSTOG00000005242) ZNF341 (ENSSTOG00000002753) PXMP4 (ENSSTOG00000002748) E2F1 (ENSSTOG00000002735) NECAB3 (ENSSTOG00000028643) ACTL10 (ENSSTOG00000000902) CBFA2T2 (ENSSTOG00000003478) SNTA1 (ENSSTOG00000020522) #21 CDK5RAP1 (ENSSTOG00000005492) #22 Alpin marmot MODERN SPECIES DYNLRB1 (ENSMMMG00000023395) ITCH (ENSMMMG00000023404) ENSMMMG00000023413 AHCY (ENSMMMG00000023416) ASIP (ENSMMMG00000023418) EIF2S2 (ENSMMMG00000023422) RALY (ENSMMMG00000023423) CHMP4B (ENSMMMG00000023441) ZNF341 (ENSMMMG00000023444) PXMP4 (ENSMMMG00000023451) E2F1 (ENSMMMG00000023454) NECAB3 (ENSMMMG00000023457) ACTL10 (ENSMMMG00000023461) CBFA2T2 (ENSMMMG00000023462) SNTA1 (ENSMMMG00000023469) #21 CDK5RAP1 (ENSMMMG00000023644) #22 ENSMMMG00000023646 ##23 BPIFB1 (ENSMMMG00000023647) #23 BPIFA1 (ENSMMMG00000023653) #24 BPIFA3 (ENSMMMG00000023655) #25 ENSMMMG00000023661 ENSMMMG00000023662 BPIFB4 (ENSMMMG00000023664) #28 BPIFB3 (ENSMMMG00000023666) #29 BPIFB6 (ENSMMMG00000023672) #30 BPIFB2 (ENSMMMG00000023676) #31 SUN5 (ENSMMMG00000023678) #32 EFCAB8 (ENSMMMG00000023682) #33 ENSMMMG00000023683 #34 DNMT3B (ENSMMMG00000023686) #35 COMMD7 (ENSMMMG00000023701) #36 Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005003145 ENSSVLG00005003129 EIF2S2 (ENSSVLG00005003099) ENSSVLG00005003066 CHMP4B (ENSSVLG00005003046) ENSSVLG00005003036 ZNF341 (ENSSVLG00005003010) PXMP4 (ENSSVLG00005002986) E2F1 (ENSSVLG00005002971) ACTL10 (ENSSVLG00005002962) ENSSVLG00005002949 NECAB3 (ENSSVLG00005002907) ENSSVLG00005002886 CBFA2T2 (ENSSVLG00005002847) SNTA1 (ENSSVLG00005002824) #21 CDK5RAP1 (ENSSVLG00005002783) #22 ENSSVLG00005002725 BPIFB1 (ENSSVLG00005002680) #23 BPIFA1 (ENSSVLG00005002640) #24 BPIFA3 (ENSSVLG00005002605) #25 BPIFB4 (ENSSVLG00005002569) #28 BPIFB3 (ENSSVLG00005002532) #29 BPIFB6 (ENSSVLG00005002490) #30 BPIFB2 (ENSSVLG00005002451) #31 SUN5 (ENSSVLG00005002374) #32 ENSSVLG00005002338 ENSSVLG00005002322 #34 ENSSVLG00005002127 #35 COMMD7 (ENSSVLG00005002025) #36 NOL4L (ENSSVLG00005001985) ASXL1 (ENSSVLG00005001929) Lagomorpha ANCESTRAL SPECIES 33 ENSGT00390000014941 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000167211 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 Rabbit MODERN SPECIES 15 PIGU (ENSOCUG00000009627) ENSOCUG00000021027 ITCH (ENSOCUG00000015354) ENSOCUG00000008592 ENSOCUG00000036618 asip (ENSOCUG00000011138) ENSOCUG00000038624 EIF2S2 (ENSOCUG00000000481) RALY (ENSOCUG00000000477) ZNF341 (ENSOCUG00000024028) PXMP4 (ENSOCUG00000005415) NECAB3 (ENSOCUG00000000850) ENSOCUG00000000854 CBFA2T2 (ENSOCUG00000000849) SNTA1 (ENSOCUG00000011916) #21 CDK5RAP1 (ENSOCUG00000017069) #22 ENSOCUG00000017051 #23 BPIFA1 (ENSOCUG00000007538) #24 ENSOCUG00000015717 #25 BPIFB3 (ENSOCUG00000014883) #29 BPIFB6 (ENSOCUG00000006815) #30 BPIFB2 (ENSOCUG00000027554) #31 SUN5 (ENSOCUG00000022223) #32 ENSOCUG00000035490 MAPRE1 (ENSOCUG00000024265) #34 DNMT3B (ENSOCUG00000017835) #35 ENSOCUG00000014339 #36 NOL4L (ENSOCUG00000010835) ASXL1 (ENSOCUG00000035849) KIF3B (ENSOCUG00000021741) ENSOCUG00000025799 Pika MODERN SPECIES 4588 SNTA1 (ENSOPRG00000006874) #21 CDK5RAP1 (ENSOPRG00000006858) #22 ENSOPRG00000006855 ENSOPRG00000006842 BPIFB1 (ENSOPRG00000006828) #23 BPIFA1 (ENSOPRG00000006812) #24 BPIFA3 (ENSOPRG00000006798) #25 ENSOPRG00000006785 #26 ENSOPRG00000006766 BPIFB4 (ENSOPRG00000006756) #28 BPIFB3 (ENSOPRG00000006748) #29 BPIFB2 (ENSOPRG00000006729) #31 SUN5 (ENSOPRG00000006713) #32 ENSOPRG00000018610 MAPRE1 (ENSOPRG00000006707) #34 DNMT3B (ENSOPRG00000006680) #35 COMMD7 (ENSOPRG00000006669) #36 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00940000163617 #33 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.a #34 Suina ANCESTRAL SPECIES 9 ENSGT00390000014941 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Pig MODERN SPECIES 8 ITCH (ENSSSCG00000007280) AHCY (ENSSSCG00000007278) ASIP (ENSSSCG00000053652) EIF2S2 (ENSSSCG00000026617) RALY (ENSSSCG00000007275) CHMP4B (ENSSSCG00000007272) ZNF341 (ENSSSCG00000021769) ENSSSCG00000034625 E2F1 (ENSSSCG00000007268) ACTL10 (ENSSSCG00000044750) ENSSSCG00000047940 NECAB3 (ENSSSCG00000029626) CBFA2T2 (ENSSSCG00000027410) ENSSSCG00000034263 SNTA1 (ENSSSCG00000063004) #21 CDK5RAP1 (ENSSSCG00000007264) #22 ENSSSCG00000007263 ENSSSCG00000007262 ##23 BPIFB1 (ENSSSCG00000007261) #23 BPIFA1 (ENSSSCG00000007260) #24 BPIFA3 (ENSSSCG00000024787) #25 BPIFA2 (ENSSSCG00000007259) #27 BPIFB4 (ENSSSCG00000029295) #28 BPIFB3 (ENSSSCG00000026137) #29 BPIFB6 (ENSSSCG00000025052) #30 BPIFB2 (ENSSSCG00000029714) #31 SUN5 (ENSSSCG00000007256) #32 ENSSSCG00000059506 MAPRE1 (ENSSSCG00000007253) #34 DNMT3B (ENSSSCG00000007252) #35 COMMD7 (ENSSSCG00000055487) #36 Chacoan peccary MODERN SPECIES 801 DYNLRB1 (ENSCWAG00000006128) ITCH (ENSCWAG00000006169) AHCY (ENSCWAG00000006316) ASIP (ENSCWAG00000006347) EIF2S2 (ENSCWAG00000006369) RALY (ENSCWAG00000006424) ENSCWAG00000006485 ZNF341 (ENSCWAG00000006507) PXMP4 (ENSCWAG00000006623) E2F1 (ENSCWAG00000006652) NECAB3 (ENSCWAG00000006683) ACTL10 (ENSCWAG00000006716) ENSCWAG00000006723 CBFA2T2 (ENSCWAG00000006761) SNTA1 (ENSCWAG00000006848) #21 CDK5RAP1 (ENSCWAG00000006898) #22 ENSCWAG00000006962 ENSCWAG00000007007 BPIFB1 (ENSCWAG00000007056) #23 BPIFA1 (ENSCWAG00000007132) #24 ENSCWAG00000007185 #25 BPIFA2 (ENSCWAG00000007236) #27 BPIFB4 (ENSCWAG00000007278) #28 BPIFB3 (ENSCWAG00000007348) #29 BPIFB6 (ENSCWAG00000007416) #30 BPIFB2 (ENSCWAG00000007471) #31 SUN5 (ENSCWAG00000007557) #32 ENSCWAG00000007672 MAPRE1 (ENSCWAG00000007693) #34 DNMT3B (ENSCWAG00000007767) #35 COMMD7 (ENSCWAG00000008773) #36 Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.a #34 Camelidae ANCESTRAL SPECIES 10 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601.h ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000167979 ENSGT00940000167211 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.a #34 Arabian camel MODERN SPECIES 10 DYNLRB1 (ENSCDRG00005012749) ITCH (ENSCDRG00005012516) AHCY (ENSCDRG00005012422) ASIP (ENSCDRG00005012368) EIF2S2 (ENSCDRG00005012288) ENSCDRG00005012122 ENSCDRG00005012091 CHMP4B (ENSCDRG00005012040) ZNF341 (ENSCDRG00005011605) PXMP4 (ENSCDRG00005011563) ACTL10 (ENSCDRG00005011389) C20orf144 (ENSCDRG00005011343) NECAB3 (ENSCDRG00005011220) CBFA2T2 (ENSCDRG00005011021) SNTA1 (ENSCDRG00005010910) #21 CDK5RAP1 (ENSCDRG00005010755) #22 ENSCDRG00005010639 ##23 ENSCDRG00005010439 #23 BPIFA1 (ENSCDRG00005010253) #24 BPIFA3 (ENSCDRG00005010065) #25 ENSCDRG00005009985 #27 BPIFB4 (ENSCDRG00005009777) #28 BPIFB3 (ENSCDRG00005009566) #29 BPIFB6 (ENSCDRG00005009313) #30 BPIFB2 (ENSCDRG00005009158) #31 SUN5 (ENSCDRG00005008823) #32 EFCAB8 (ENSCDRG00005019793) #33 MAPRE1 (ENSCDRG00005019775) #34 DNMT3B (ENSCDRG00005017779) #35 COMMD7 (ENSCDRG00005017575) #36 ENSCDRG00005017548 Alpaca MODERN SPECIES 236 CDK5RAP1 (ENSVPAG00000009690) #22 ENSVPAG00000009689 ENSVPAG00000009688 ENSVPAG00000009687 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 Cetacea ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c Odontoceti ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00490000043329.a.a.a.pb #34 ENSGT01100000263546.e.a.b #29 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 Dolphin MODERN SPECIES 278 SNTA1 (ENSTTRG00000010869) #21 CDK5RAP1 (ENSTTRG00000010868) #22 ENSTTRG00000010866 BPIFB1 (ENSTTRG00000010865) #23 BPIFA1 (ENSTTRG00000010864) #24 BPIFA3 (ENSTTRG00000010863) #25 ENSTTRG00000010861 #27 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 ENSGT00940000160566 Monodontidae DUPLICATION Monodontidae ANCESTRAL SPECIES 1 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361.a #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j ENSGT00390000015634 ENSGT00940000160566 Narwhal MODERN SPECIES 299 MAP1LC3A (ENSMMNG00015001604) DYNLRB1 (ENSMMNG00015001633) ITCH (ENSMMNG00015001660) AHCY (ENSMMNG00015001713) ENSMMNG00015001751 EIF2S2 (ENSMMNG00015001772) RALY (ENSMMNG00015001794) ENSMMNG00015001817 ZNF341 (ENSMMNG00015001854) PXMP4 (ENSMMNG00015001891) E2F1 (ENSMMNG00015001904) NECAB3 (ENSMMNG00015001933) ENSMMNG00015001984 CBFA2T2 (ENSMMNG00015002029) SNTA1 (ENSMMNG00015002113) #21 CDK5RAP1 (ENSMMNG00015002156) #22 BPIFB1 (ENSMMNG00015002195) #23 BPIFA1 (ENSMMNG00015002245) #24 BPIFA3 (ENSMMNG00015002319) #25 BPIFB4 (ENSMMNG00015002370) #28 SUN5 (ENSMMNG00015002432) #32 ENSMMNG00015002504 ENSMMNG00015002532 #34 DNMT3B (ENSMMNG00015002780) #35 COMMD7 (ENSMMNG00015003283) #36 NOL4L (ENSMMNG00015003321) ASXL1 (ENSMMNG00015003413) KIF3B (ENSMMNG00015003500) POFUT1 (ENSMMNG00015003526) PLAGL2 (ENSMMNG00015003544) ENSMMNG00015003559 Beluga whale MODERN SPECIES 36 ITCH (ENSDLEG00000018226) AHCY (ENSDLEG00000018252) ASIP (ENSDLEG00000018261) EIF2S2 (ENSDLEG00000018274) RALY (ENSDLEG00000018282) CHMP4B (ENSDLEG00000018298) ZNF341 (ENSDLEG00000018304) PXMP4 (ENSDLEG00000018317) E2F1 (ENSDLEG00000018330) NECAB3 (ENSDLEG00000018392) ACTL10 (ENSDLEG00000018420) ENSDLEG00000018425 CBFA2T2 (ENSDLEG00000018440) SNTA1 (ENSDLEG00000018449) #21 ENSDLEG00000018457 #22 ENSDLEG00000018464 #22 ENSDLEG00000018481 #23 BPIFA1 (ENSDLEG00000018496) #24 BPIFA3 (ENSDLEG00000018509) #25 BPIFB4 (ENSDLEG00000018531) #28 ENSDLEG00000018557 #34 DNMT3B (ENSDLEG00000018581) #35 COMMD7 (ENSDLEG00000018629) #36 NOL4L (ENSDLEG00000018639) ASXL1 (ENSDLEG00000018668) KIF3B (ENSDLEG00000018749) POFUT1 (ENSDLEG00000018766) PLAGL2 (ENSDLEG00000018773) ENSDLEG00000018777 TM9SF4 (ENSDLEG00000012994) ENSDLEG00000013016 Monodontidae ANCESTRAL SPECIES ENSGT00940000160361.b #22 Beluga whale MODERN SPECIES 36 DYNLRB1 (ENSDLEG00000018207) ITCH (ENSDLEG00000018226) AHCY (ENSDLEG00000018252) ASIP (ENSDLEG00000018261) EIF2S2 (ENSDLEG00000018274) RALY (ENSDLEG00000018282) CHMP4B (ENSDLEG00000018298) ZNF341 (ENSDLEG00000018304) PXMP4 (ENSDLEG00000018317) E2F1 (ENSDLEG00000018330) NECAB3 (ENSDLEG00000018392) ACTL10 (ENSDLEG00000018420) ENSDLEG00000018425 CBFA2T2 (ENSDLEG00000018440) SNTA1 (ENSDLEG00000018449) #21 ENSDLEG00000018457 #22 ENSDLEG00000018464 #22 ENSDLEG00000018481 #23 BPIFA1 (ENSDLEG00000018496) #24 BPIFA3 (ENSDLEG00000018509) #25 BPIFB4 (ENSDLEG00000018531) #28 ENSDLEG00000018557 #34 DNMT3B (ENSDLEG00000018581) #35 COMMD7 (ENSDLEG00000018629) #36 NOL4L (ENSDLEG00000018639) ASXL1 (ENSDLEG00000018668) KIF3B (ENSDLEG00000018749) POFUT1 (ENSDLEG00000018766) PLAGL2 (ENSDLEG00000018773) ENSDLEG00000018777 TM9SF4 (ENSDLEG00000012994) Vaquita MODERN SPECIES 6 PIGU (ENSPSNG00000012993) MAP1LC3A (ENSPSNG00000013092) ITCH (ENSPSNG00000013334) ENSPSNG00000014022 ASIP (ENSPSNG00000014123) EIF2S2 (ENSPSNG00000014204) RALY (ENSPSNG00000014290) CHMP4B (ENSPSNG00000014408) ZNF341 (ENSPSNG00000014477) PXMP4 (ENSPSNG00000014910) E2F1 (ENSPSNG00000014974) NECAB3 (ENSPSNG00000015043) ENSPSNG00000015208 CBFA2T2 (ENSPSNG00000015283) SNTA1 (ENSPSNG00000015499) #21 CDK5RAP1 (ENSPSNG00000004778) #22 BPIFB1 (ENSPSNG00000004841) #23 BPIFA1 (ENSPSNG00000004902) #24 BPIFA3 (ENSPSNG00000004966) #25 SUN5 (ENSPSNG00000005025) #32 ENSPSNG00000005099 MAPRE1 (ENSPSNG00000005125) #34 DNMT3B (ENSPSNG00000005285) #35 COMMD7 (ENSPSNG00000005578) #36 NOL4L (ENSPSNG00000005632) ASXL1 (ENSPSNG00000005728) KIF3B (ENSPSNG00000005861) POFUT1 (ENSPSNG00000005902) PLAGL2 (ENSPSNG00000005936) ENSPSNG00000005961 TM9SF4 (ENSPSNG00000006014) Sperm whale MODERN SPECIES 5 GGT7 (ENSPCTG00005008516) NCOA6 (ENSPCTG00005008566) TP53INP2 (ENSPCTG00005008663) PIGU (ENSPCTG00005008727) ENSPCTG00005009176 MAP1LC3A (ENSPCTG00005009227) ENSPCTG00005009300 ENSPCTG00005009432 ITCH (ENSPCTG00005009484) EIF2S2 (ENSPCTG00005009850) RALY (ENSPCTG00005009899) CHMP4B (ENSPCTG00005009997) ZNF341 (ENSPCTG00005010042) ENSPCTG00005010096 SNTA1 (ENSPCTG00005010299) #21 CDK5RAP1 (ENSPCTG00005010350) #22 BPIFA1 (ENSPCTG00005010475) #24 BPIFA3 (ENSPCTG00005010684) #25 BPIFB3 (ENSPCTG00005010805) #29 SUN5 (ENSPCTG00005011002) #32 ENSPCTG00005011260 MAPRE1 (ENSPCTG00005011307) #34 DNMT3B (ENSPCTG00005011472) #35 COMMD7 (ENSPCTG00005012985) #36 NOL4L (ENSPCTG00005013151) ASXL1 (ENSPCTG00005013333) KIF3B (ENSPCTG00005013787) TM9SF4 (ENSPCTG00005013852) HCK (ENSPCTG00005013922) CCM2L (ENSPCTG00005014508) XKR7 (ENSPCTG00005014688) Blue whale MODERN SPECIES 6 ENSBMSG00010014355 AHCY (ENSBMSG00010014387) ENSBMSG00010014441 EIF2S2 (ENSBMSG00010014478) RALY (ENSBMSG00010014524) ENSBMSG00010014552 ZNF341 (ENSBMSG00010014577) PXMP4 (ENSBMSG00010014607) E2F1 (ENSBMSG00010014642) NECAB3 (ENSBMSG00010014701) ACTL10 (ENSBMSG00010014804) ENSBMSG00010014818 ENSBMSG00010014841 CBFA2T2 (ENSBMSG00010014897) SNTA1 (ENSBMSG00010014974) #21 CDK5RAP1 (ENSBMSG00010015008) #22 BPIFB1 (ENSBMSG00010015057) #23 BPIFA1 (ENSBMSG00010015165) #24 BPIFA3 (ENSBMSG00010015251) #25 BPIFB4 (ENSBMSG00010015330) #28 BPIFB3 (ENSBMSG00010015474) #29 BPIFB6 (ENSBMSG00010015545) #30 BPIFB2 (ENSBMSG00010015628) #31 ENSBMSG00010015685 MAPRE1 (ENSBMSG00010015710) #34 DNMT3B (ENSBMSG00010015879) #35 COMMD7 (ENSBMSG00010016369) #36 ENSBMSG00010016439 NOL4L (ENSBMSG00010016482) ASXL1 (ENSBMSG00010012180) KIF3B (ENSBMSG00010012233) Pecora ANCESTRAL SPECIES 9 ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.t ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 Yarkand deer MODERN SPECIES 15 ASIP (ENSCHYG00000021759) EIF2S2 (ENSCHYG00000021669) RALY (ENSCHYG00000021487) CHMP4B (ENSCHYG00000021413) ZNF341 (ENSCHYG00000021267) PXMP4 (ENSCHYG00000021195) E2F1 (ENSCHYG00000021119) ACTL10 (ENSCHYG00000021085) ENSCHYG00000021007 NECAB3 (ENSCHYG00000020779) ENSCHYG00000020718 CBFA2T2 (ENSCHYG00000020600) SNTA1 (ENSCHYG00000020536) #21 ENSCHYG00000020441 ENSCHYG00000020289 ##23 CDK5RAP1 (ENSCHYG00000019777) #22 BPIFB1 (ENSCHYG00000019627) #23 BPIFA1 (ENSCHYG00000019488) #24 BPIFA3 (ENSCHYG00000019399) #25 ENSCHYG00000019367 ENSCHYG00000019281 #27 ENSCHYG00000019207 #27 ENSCHYG00000019160 BPIFB4 (ENSCHYG00000018989) #28 BPIFB3 (ENSCHYG00000018802) #29 BPIFB6 (ENSCHYG00000018569) #30 BPIFB2 (ENSCHYG00000018354) #31 SUN5 (ENSCHYG00000017917) #32 ENSCHYG00000017858 DNMT3B (ENSCHYG00000016553) #35 COMMD7 (ENSCHYG00000016228) #36 Percora_a ANCESTRAL SPECIES 10 ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.t ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 Siberian musk deer MODERN SPECIES 1198 ITCH (ENSMMSG00000011807) AHCY (ENSMMSG00000011983) ASIP (ENSMMSG00000012026) EIF2S2 (ENSMMSG00000012063) RALY (ENSMMSG00000012103) CHMP4B (ENSMMSG00000012164) ZNF341 (ENSMMSG00000012195) PXMP4 (ENSMMSG00000012229) E2F1 (ENSMMSG00000012256) NECAB3 (ENSMMSG00000012299) ACTL10 (ENSMMSG00000012331) ENSMMSG00000012346 ENSMMSG00000012366 CBFA2T2 (ENSMMSG00000012397) SNTA1 (ENSMMSG00000012500) #21 CDK5RAP1 (ENSMMSG00000012553) #22 ENSMMSG00000012657 ENSMMSG00000012706 ##23 BPIFB1 (ENSMMSG00000012771) #23 BPIFA1 (ENSMMSG00000012839) #24 BPIFA3 (ENSMMSG00000012875) #25 ENSMMSG00000012907 #27 ENSMMSG00000012944 Bovidae ANCESTRAL SPECIES 10 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 Caprinae ANCESTRAL SPECIES 21 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00950000183604.b.b ENSGT00950000183604.b.a ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.pb #34 Goat MODERN SPECIES 4 ITCH (ENSCHIG00000013191) AHCY (ENSCHIG00000026741) ASIP (ENSCHIG00000014323) ENSCHIG00000012008 ENSCHIG00000026317 RALY (ENSCHIG00000026609) CHMP4B (ENSCHIG00000015320) ZNF341 (ENSCHIG00000018677) PXMP4 (ENSCHIG00000019935) E2F1 (ENSCHIG00000015683) ACTL10 (ENSCHIG00000002177) ENSCHIG00000024263 NECAB3 (ENSCHIG00000024415) ENSCHIG00000017263 SNTA1 (ENSCHIG00000026424) #21 CDK5RAP1 (ENSCHIG00000026048) #22 ENSCHIG00000006775 ##23 BPIFB1 (ENSCHIG00000017212) #23 BPIFA1 (ENSCHIG00000024834) #24 BPIFA3 (ENSCHIG00000019106) #25 ENSCHIG00000021482 #27 ENSCHIG00000023902 ENSCHIG00000014390 #27 ENSCHIG00000021281 ENSCHIG00000001593 ENSCHIG00000009057 BPIFB4 (ENSCHIG00000015953) #28 BPIFB3 (ENSCHIG00000023551) #29 BPIFB6 (ENSCHIG00000019460) #30 BPIFB2 (ENSCHIG00000026759) #31 SUN5 (ENSCHIG00000015270) #32 Rambouillet Sheep MODERN SPECIES 4 MAP1LC3A (ENSOARG00020013584) DYNLRB1 (ENSOARG00020013544) ITCH (ENSOARG00020013255) AHCY (ENSOARG00020012830) ENSOARG00020012697 RALY (ENSOARG00020012493) CHMP4B (ENSOARG00020012426) ZNF341 (ENSOARG00020012178) PXMP4 (ENSOARG00020012090) E2F1 (ENSOARG00020011997) ENSOARG00020011959 NECAB3 (ENSOARG00020011215) ENSOARG00020011066 ENSOARG00020011013 SNTA1 (ENSOARG00020010934) #21 CDK5RAP1 (ENSOARG00020010445) #22 ENSOARG00020010310 ##23 BPIFA1 (ENSOARG00020009831) #24 BPIFA3 (ENSOARG00020009757) #25 ENSOARG00020009734 #27 ENSOARG00020009694 ENSOARG00020009657 ENSOARG00020009595 ENSOARG00020009537 #27 ENSOARG00020009477 #27 BPIFB4 (ENSOARG00020009376) #28 BPIFB3 (ENSOARG00020009266) #29 BPIFB6 (ENSOARG00020009171) #30 SUN5 (ENSOARG00020008881) #32 EFCAB8 (ENSOARG00020008596) #33 DNMT3B (ENSOARG00020007704) #35 Bovinae ANCESTRAL SPECIES 23 ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.t ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 Bos ANCESTRAL SPECIES 24 ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a.t ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 Bos_a ANCESTRAL SPECIES 7 ENSGT00940000157014.a ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT00940000170884 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 Wild yak MODERN SPECIES 860 ENSBMUG00000024806 ZNF341 (ENSBMUG00000024798) ENSBMUG00000024790 E2F1 (ENSBMUG00000024777) ACTL10 (ENSBMUG00000024774) NECAB3 (ENSBMUG00000024769) ENSBMUG00000024759 SNTA1 (ENSBMUG00000024747) #21 CDK5RAP1 (ENSBMUG00000024744) #22 ENSBMUG00000024718 ENSBMUG00000024715 BPIFB1 (ENSBMUG00000024706) #23 BPIFA1 (ENSBMUG00000024703) #24 BPIFA3 (ENSBMUG00000024694) #25 ENSBMUG00000024685 #26 ENSBMUG00000024667 #27 ENSBMUG00000024661 TENT4A (ENSBMUG00000024650) SRD5A1 (ENSBMUG00000024628) NSUN2 (ENSBMUG00000024440) UBE2QL1 (ENSBMUG00000024147) ENSBMUG00000024143 ENSBMUG00000024138 Domestic yak MODERN SPECIES 3 ENSBGRG00000006852 RALY (ENSBGRG00000006728) ENSBGRG00000006672 ZNF341 (ENSBGRG00000006484) ENSBGRG00000006426 E2F1 (ENSBGRG00000006368) ACTL10 (ENSBGRG00000006349) C20orf144 (ENSBGRG00000006314) NECAB3 (ENSBGRG00000006194) ENSBGRG00000006176 ENSBGRG00000006170 ENSBGRG00000006162 CBFA2T2 (ENSBGRG00000006122) SNTA1 (ENSBGRG00000006075) #21 ENSBGRG00000006020 CDK5RAP1 (ENSBGRG00000005894) #22 ENSBGRG00000005792 BPIFB1 (ENSBGRG00000005686) #23 BPIFA1 (ENSBGRG00000005622) #24 BPIFA3 (ENSBGRG00000005582) #25 ENSBGRG00000005555 #27 ENSBGRG00000005545 ENSBGRG00000005491 #27 ENSBGRG00000005469 #27 ENSBGRG00000005450 BPIFB4 (ENSBGRG00000005415) #28 BPIFB3 (ENSBGRG00000005308) #29 BPIFB6 (ENSBGRG00000005172) #30 BPIFB2 (ENSBGRG00000005124) #31 SUN5 (ENSBGRG00000004983) #32 ENSBGRG00000004944 Bos_b ANCESTRAL SPECIES 26 ENSGT00390000014165.c.a.b.b.b ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663.r.a ENSGT00390000000546 ENSGT00390000001562.a.a ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00950000183176.a.s.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b.a.b #27 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.b #27 ENSGT01100000263546.d.b.a.b.a.a.b #27 ENSGT01100000263546.d.b.a.b.a.a.a #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 Hybrid Bos Indicus MODERN SPECIES 4 AHCY (ENSBIXG00005028542) ASIP (ENSBIXG00005004914) EIF2S2 (ENSBIXG00005006636) RALY (ENSBIXG00005028479) ENSBIXG00005004879 ZNF341 (ENSBIXG00005028356) ENSBIXG00005028326 E2F1 (ENSBIXG00005028294) NECAB3 (ENSBIXG00005028280) ACTL10 (ENSBIXG00005028235) ENSBIXG00005028229 ENSBIXG00005004852 ENSBIXG00005028172 ENSBIXG00005004838 SNTA1 (ENSBIXG00005028108) #21 CDK5RAP1 (ENSBIXG00005028076) #22 ENSBIXG00005027971 ENSBIXG00005027937 ##23 BPIFB1 (ENSBIXG00005027890) #23 ENSBIXG00005027873 BPIFA1 (ENSBIXG00005027857) #24 BPIFA3 (ENSBIXG00005027808) #25 ENSBIXG00005005327 #27 ENSBIXG00005027704 ENSBIXG00005027683 #27 ENSBIXG00005027671 #27 BPIFB4 (ENSBIXG00005027645) #28 BPIFB3 (ENSBIXG00005027593) #29 BPIFB6 (ENSBIXG00005027534) #30 BPIFB2 (ENSBIXG00005027458) #31 SUN5 (ENSBIXG00005027425) #32 Cow MODERN SPECIES 4 AHCY (ENSBTAG00000018101) ASIP (ENSBTAG00000034077) EIF2S2 (ENSBTAG00000005969) RALY (ENSBTAG00000016524) CHMP4B (ENSBTAG00000013387) ZNF341 (ENSBTAG00000039313) PXMP4 (ENSBTAG00000038738) E2F1 (ENSBTAG00000003971) C13H20orf144 (ENSBTAG00000003962) NECAB3 (ENSBTAG00000003946) ENSBTAG00000053797 ENSBTAG00000053051 ENSBTAG00000010131 SNTA1 (ENSBTAG00000000512) #21 ENSBTAG00000031354 CDK5RAP1 (ENSBTAG00000018535) #22 BPIFB5 (ENSBTAG00000031361) ##23 BPIFB1 (ENSBTAG00000015724) #23 BPIFA1 (ENSBTAG00000017098) #24 BPIFA3 (ENSBTAG00000006802) #25 ENSBTAG00000031373 #26 BPIFA2B (ENSBTAG00000019752) #27 ENSBTAG00000011704 BPIFA2C (ENSBTAG00000031376) #27 ENSBTAG00000031375 #27 BPIFA2A (ENSBTAG00000009144) #27 BPIFB4 (ENSBTAG00000038412) #28 BPIFB3 (ENSBTAG00000038687) #29 BPIFB6 (ENSBTAG00000010112) #30 BPIFB2 (ENSBTAG00000019200) #31 SUN5 (ENSBTAG00000013056) #32 American bison MODERN SPECIES 3266 ENSBBBG00000007314 AHCY (ENSBBBG00000018017) ASIP (ENSBBBG00000018031) EIF2S2 (ENSBBBG00000004436) RALY (ENSBBBG00000004441) CHMP4B (ENSBBBG00000004443) ZNF341 (ENSBBBG00000018116) ENSBBBG00000004455 E2F1 (ENSBBBG00000008832) ACTL10 (ENSBBBG00000018177) ENSBBBG00000004464 NECAB3 (ENSBBBG00000018216) ENSBBBG00000018224 ENSBBBG00000018285 SNTA1 (ENSBBBG00000018296) #21 CDK5RAP1 (ENSBBBG00000018377) #22 ENSBBBG00000009135 BPIFB1 (ENSBBBG00000018409) #23 BPIFA1 (ENSBBBG00000018424) #24 BPIFA3 (ENSBBBG00000004515) #25 ENSBBBG00000018447 #26 ENSBBBG00000018462 #27 ENSBBBG00000004535 ENSBBBG00000004542 ENSBBBG00000018490 #27 ENSBBBG00000018502 #27 ENSBBBG00000018505 Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 Carnivora ANCESTRAL SPECIES 20 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 Caniformia ANCESTRAL SPECIES ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 Caniformia_b ANCESTRAL SPECIES ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 Ursidae ANCESTRAL SPECIES 14 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.b ENSGT00940000157601 ENSGT00940000154663.j ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000170884 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 Ursus ANCESTRAL SPECIES 1 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804.b ENSGT00940000157601 ENSGT00940000154663.j ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Polar bear MODERN SPECIES 253 EIF2S2 (ENSUMAG00000024105) RALY (ENSUMAG00000024106) CHMP4B (ENSUMAG00000024107) ZNF341 (ENSUMAG00000024108) PXMP4 (ENSUMAG00000024110) E2F1 (ENSUMAG00000024112) NECAB3 (ENSUMAG00000024113) ACTL10 (ENSUMAG00000024114) CBFA2T2 (ENSUMAG00000024115) CDK5RAP1 (ENSUMAG00000024117) #22 BPIFB1 (ENSUMAG00000024143) #23 BPIFA1 (ENSUMAG00000024148) #24 BPIFA3 (ENSUMAG00000024153) #25 ENSUMAG00000024157 ENSUMAG00000024158 #27 BPIFB4 (ENSUMAG00000024159) #28 BPIFB6 (ENSUMAG00000024161) #30 BPIFB2 (ENSUMAG00000024164) #31 EFCAB8 (ENSUMAG00000024168) #33 MAPRE1 (ENSUMAG00000024172) #34 DNMT3B (ENSUMAG00000024174) #35 COMMD7 (ENSUMAG00000024175) #36 NOL4L (ENSUMAG00000024177) ASXL1 (ENSUMAG00000024178) ENSUMAG00000024179 American black bear MODERN SPECIES 3039 ENSUAMG00000025658 #22 Giant Panda MODERN SPECIES 4 MAP1LC3A (ENSAMEG00000009183) ENSAMEG00000009179 ITCH (ENSAMEG00000009134) AHCY (ENSAMEG00000009105) ASIP (ENSAMEG00000009091) EIF2S2 (ENSAMEG00000009071) RALY (ENSAMEG00000009050) CHMP4B (ENSAMEG00000009038) ZNF341 (ENSAMEG00000009012) ENSAMEG00000009004 ENSAMEG00000008958 ACTL10 (ENSAMEG00000008990) ENSAMEG00000019179 CBFA2T2 (ENSAMEG00000008925) SNTA1 (ENSAMEG00000012992) #21 CDK5RAP1 (ENSAMEG00000013021) #22 ENSAMEG00000013060 BPIFB1 (ENSAMEG00000013065) #23 BPIFA1 (ENSAMEG00000013090) #24 BPIFA3 (ENSAMEG00000013101) #25 ENSAMEG00000013108 ENSAMEG00000013119 #27 BPIFB4 (ENSAMEG00000013134) #28 BPIFB3 (ENSAMEG00000013151) #29 BPIFB6 (ENSAMEG00000013170) #30 BPIFB2 (ENSAMEG00000013181) #31 SUN5 (ENSAMEG00000013221) #32 ENSAMEG00000024835 MAPRE1 (ENSAMEG00000013238) #34 DNMT3B (ENSAMEG00000013257) #35 COMMD7 (ENSAMEG00000013318) #36 Mustelinae ANCESTRAL SPECIES 11 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00390000007560.q.a.d ENSGT00930000151259 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 Ferret DUPLICATION Ferret DUPLICATION Ferret MODERN SPECIES 180 MAP1LC3A (ENSMPUG00000017814) DYNLRB1 (ENSMPUG00000017815) ITCH (ENSMPUG00000017816) AHCY (ENSMPUG00000017817) ASIP (ENSMPUG00000017818) EIF2S2 (ENSMPUG00000017819) RALY (ENSMPUG00000017820) CHMP4B (ENSMPUG00000017821) ZNF341 (ENSMPUG00000017822) PXMP4 (ENSMPUG00000017823) E2F1 (ENSMPUG00000017824) NECAB3 (ENSMPUG00000017825) ENSMPUG00000017829 CBFA2T2 (ENSMPUG00000017831) SNTA1 (ENSMPUG00000017832) #21 ENSMPUG00000017835 #22 ENSMPUG00000017836 #22 ENSMPUG00000017837 #22 ENSMPUG00000017838 ENSMPUG00000017839 BPIFB1 (ENSMPUG00000017841) #23 BPIFA1 (ENSMPUG00000017848) #24 BPIFA3 (ENSMPUG00000017855) #25 ENSMPUG00000017856 #27 ENSMPUG00000017857 BPIFB4 (ENSMPUG00000017858) #28 ENSMPUG00000017860 BPIFB3 (ENSMPUG00000017861) #29 ENSMPUG00000017862 BPIFB2 (ENSMPUG00000017863) #31 SUN5 (ENSMPUG00000017864) #32 Ferret MODERN SPECIES 180 ITCH (ENSMPUG00000017816) AHCY (ENSMPUG00000017817) ASIP (ENSMPUG00000017818) EIF2S2 (ENSMPUG00000017819) RALY (ENSMPUG00000017820) CHMP4B (ENSMPUG00000017821) ZNF341 (ENSMPUG00000017822) PXMP4 (ENSMPUG00000017823) E2F1 (ENSMPUG00000017824) NECAB3 (ENSMPUG00000017825) ENSMPUG00000017829 CBFA2T2 (ENSMPUG00000017831) SNTA1 (ENSMPUG00000017832) #21 ENSMPUG00000017835 #22 ENSMPUG00000017836 #22 ENSMPUG00000017837 #22 ENSMPUG00000017838 ENSMPUG00000017839 BPIFB1 (ENSMPUG00000017841) #23 BPIFA1 (ENSMPUG00000017848) #24 BPIFA3 (ENSMPUG00000017855) #25 ENSMPUG00000017856 #27 ENSMPUG00000017857 BPIFB4 (ENSMPUG00000017858) #28 ENSMPUG00000017860 BPIFB3 (ENSMPUG00000017861) #29 ENSMPUG00000017862 BPIFB2 (ENSMPUG00000017863) #31 SUN5 (ENSMPUG00000017864) #32 ENSMPUG00000019031 EFCAB8 (ENSMPUG00000017865) #33 Ferret MODERN SPECIES 180 DYNLRB1 (ENSMPUG00000017815) ITCH (ENSMPUG00000017816) AHCY (ENSMPUG00000017817) ASIP (ENSMPUG00000017818) EIF2S2 (ENSMPUG00000017819) RALY (ENSMPUG00000017820) CHMP4B (ENSMPUG00000017821) ZNF341 (ENSMPUG00000017822) PXMP4 (ENSMPUG00000017823) E2F1 (ENSMPUG00000017824) NECAB3 (ENSMPUG00000017825) ENSMPUG00000017829 CBFA2T2 (ENSMPUG00000017831) SNTA1 (ENSMPUG00000017832) #21 ENSMPUG00000017835 #22 ENSMPUG00000017836 #22 ENSMPUG00000017837 #22 ENSMPUG00000017838 ENSMPUG00000017839 BPIFB1 (ENSMPUG00000017841) #23 BPIFA1 (ENSMPUG00000017848) #24 BPIFA3 (ENSMPUG00000017855) #25 ENSMPUG00000017856 #27 ENSMPUG00000017857 BPIFB4 (ENSMPUG00000017858) #28 ENSMPUG00000017860 BPIFB3 (ENSMPUG00000017861) #29 ENSMPUG00000017862 BPIFB2 (ENSMPUG00000017863) #31 SUN5 (ENSMPUG00000017864) #32 ENSMPUG00000019031 American mink MODERN SPECIES 17 ENSNVIG00000017524 ITCH (ENSNVIG00000017551) AHCY (ENSNVIG00000017607) ASIP (ENSNVIG00000017624) EIF2S2 (ENSNVIG00000017647) RALY (ENSNVIG00000017666) CHMP4B (ENSNVIG00000017728) ZNF341 (ENSNVIG00000017752) PXMP4 (ENSNVIG00000017800) E2F1 (ENSNVIG00000017832) NECAB3 (ENSNVIG00000017859) ACTL10 (ENSNVIG00000017892) ENSNVIG00000017895 CBFA2T2 (ENSNVIG00000017905) SNTA1 (ENSNVIG00000017966) #21 CDK5RAP1 (ENSNVIG00000017990) #22 ENSNVIG00000018027 ##23 BPIFB1 (ENSNVIG00000018051) #23 BPIFA1 (ENSNVIG00000018087) #24 BPIFA3 (ENSNVIG00000018144) #25 ENSNVIG00000018194 BPIFB4 (ENSNVIG00000018205) #28 BPIFB3 (ENSNVIG00000018227) #29 BPIFB6 (ENSNVIG00000018242) #30 BPIFB2 (ENSNVIG00000018261) #31 SUN5 (ENSNVIG00000018291) #32 ENSNVIG00000018321 ENSNVIG00000018325 MAPRE1 (ENSNVIG00000018328) #34 DNMT3B (ENSNVIG00000018344) #35 COMMD7 (ENSNVIG00000018598) #36 Canidae ANCESTRAL SPECIES 19 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.d.a ##23 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.a #34 Canis_lupus ANCESTRAL SPECIES 13 ENSGT00390000017515.o.a ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00940000154661.a.a ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.d.a ##23 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.a #34 Dog MODERN SPECIES 16 ITCH (ENSCAFG00845015881) ENSCAFG00845015788 ENSCAFG00845015756 ASIP (ENSCAFG00845015715) EIF2S2 (ENSCAFG00845025914) RALY (ENSCAFG00845025648) CHMP4B (ENSCAFG00845025558) ZNF341 (ENSCAFG00845025407) TIMM8A (ENSCAFG00845025368) E2F1 (ENSCAFG00845025182) ENSCAFG00845025127 ENSCAFG00845025080 NECAB3 (ENSCAFG00845024784) CBFA2T2 (ENSCAFG00845024493) CDK5RAP1 (ENSCAFG00845024407) #21 CDK5RAP1 (ENSCAFG00845024161) #22 ENSCAFG00845024074 ENSCAFG00845024007 ##23 BPIFB1 (ENSCAFG00845023875) #23 BPIFA1 (ENSCAFG00845023690) #24 BPIFA3 (ENSCAFG00845023594) #25 ENSCAFG00845023553 BPIFA2 (ENSCAFG00845023488) #27 ENSCAFG00845023399 ##23 BPIFB4 (ENSCAFG00845023291) #28 BPIFB3 (ENSCAFG00845023196) #29 BPIFB6 (ENSCAFG00845023097) #30 BPIFB2 (ENSCAFG00845022982) #31 SUN5 (ENSCAFG00845022906) #32 ENSCAFG00845022856 MAPRE1 (ENSCAFG00845022793) #34 Dingo MODERN SPECIES 343 ENSCAFG00020005093 ASIP (ENSCAFG00020005092) EIF2S2 (ENSCAFG00020005078) RALY (ENSCAFG00020005069) ENSCAFG00020005046 CHMP4B (ENSCAFG00020005042) ZNF341 (ENSCAFG00020004998) ENSCAFG00020004983 PXMP4 (ENSCAFG00020004976) E2F1 (ENSCAFG00020004968) ACTL10 (ENSCAFG00020004965) ENSCAFG00020004963 NECAB3 (ENSCAFG00020004926) CBFA2T2 (ENSCAFG00020004923) SNTA1 (ENSCAFG00020004908) #21 CDK5RAP1 (ENSCAFG00020004901) #22 ENSCAFG00020004889 ##23 BPIFB1 (ENSCAFG00020004882) #23 BPIFA1 (ENSCAFG00020004859) #24 BPIFA3 (ENSCAFG00020004853) #25 ENSCAFG00020004846 ENSCAFG00020004841 #27 BPIFB4 (ENSCAFG00020004810) #28 BPIFB3 (ENSCAFG00020004800) #29 BPIFB6 (ENSCAFG00020004797) #30 BPIFB2 (ENSCAFG00020004786) #31 SUN5 (ENSCAFG00020004779) #32 EFCAB8 (ENSCAFG00020004774) #33 ENSCAFG00020004771 #34 DNMT3B (ENSCAFG00020004474) #35 COMMD7 (ENSCAFG00020004437) #36 Red fox MODERN SPECIES 79 ENSVVUG00000004434 ENSVVUG00000004473 AHCY (ENSVVUG00000004477) ENSVVUG00000004504 ENSVVUG00000004519 RALY (ENSVVUG00000004546) ENSVVUG00000004559 CHMP4B (ENSVVUG00000004581) ZNF341 (ENSVVUG00000004600) PXMP4 (ENSVVUG00000004749) E2F1 (ENSVVUG00000004757) NECAB3 (ENSVVUG00000004770) ACTL10 (ENSVVUG00000004819) CBFA2T2 (ENSVVUG00000004825) SNTA1 (ENSVVUG00000004863) #21 CDK5RAP1 (ENSVVUG00000004885) #22 ENSVVUG00000004922 BPIFB1 (ENSVVUG00000004954) #23 BPIFA1 (ENSVVUG00000004968) #24 BPIFA3 (ENSVVUG00000004970) #25 ENSVVUG00000004973 ENSVVUG00000004976 #27 BPIFB4 (ENSVVUG00000004980) #28 BPIFB3 (ENSVVUG00000004985) #29 BPIFB6 (ENSVVUG00000005002) #30 BPIFB2 (ENSVVUG00000005019) #31 SUN5 (ENSVVUG00000005048) #32 EFCAB8 (ENSVVUG00000005061) #33 DNMT3B (ENSVVUG00000005117) #35 COMMD7 (ENSVVUG00000005192) #36 NOL4L (ENSVVUG00000005193) Felidae ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014.d ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.ob.b #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Panthera ANCESTRAL SPECIES 2 ENSGT00390000011067.A ENSGT00940000157014.d ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Tiger MODERN SPECIES 25 MAP1LC3A (ENSPTIG00000008448) DYNLRB1 (ENSPTIG00000007501) ITCH (ENSPTIG00000005169) AHCY (ENSPTIG00000022112) ASIP (ENSPTIG00000022078) EIF2S2 (ENSPTIG00000022041) RALY (ENSPTIG00000021910) CHMP4B (ENSPTIG00000021794) ZNF341 (ENSPTIG00000019844) PXMP4 (ENSPTIG00000018768) E2F1 (ENSPTIG00000016955) ACTL10 (ENSPTIG00000001807) NECAB3 (ENSPTIG00000009683) CBFA2T2 (ENSPTIG00000020570) SNTA1 (ENSPTIG00000018658) #21 CDK5RAP1 (ENSPTIG00000016645) #22 ENSPTIG00000013877 ##23 BPIFB1 (ENSPTIG00000012791) #23 BPIFA1 (ENSPTIG00000008137) #24 BPIFA3 (ENSPTIG00000006775) #25 ENSPTIG00000006019 BPIFA2 (ENSPTIG00000002366) #27 BPIFB4 (ENSPTIG00000021563) #28 BPIFB3 (ENSPTIG00000019519) #29 BPIFB6 (ENSPTIG00000017591) #30 BPIFB2 (ENSPTIG00000017316) #31 SUN5 (ENSPTIG00000013586) #32 EFCAB8 (ENSPTIG00000010965) #33 MAPRE1 (ENSPTIG00000009541) #34 DNMT3B (ENSPTIG00000015474) #35 COMMD7 (ENSPTIG00000013437) #36 Panthera_a ANCESTRAL SPECIES 1 ENSGT00390000011067.A ENSGT00940000157014.d ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 leopard MODERN SPECIES 32 MAP1LC3A (ENSPPRG00000020454) DYNLRB1 (ENSPPRG00000018205) ITCH (ENSPPRG00000017149) AHCY (ENSPPRG00000015988) ASIP (ENSPPRG00000015476) EIF2S2 (ENSPPRG00000015102) RALY (ENSPPRG00000014593) CHMP4B (ENSPPRG00000013846) ZNF341 (ENSPPRG00000013033) PXMP4 (ENSPPRG00000011904) E2F1 (ENSPPRG00000011405) NECAB3 (ENSPPRG00000011300) ACTL10 (ENSPPRG00000015321) CBFA2T2 (ENSPPRG00000009192) SNTA1 (ENSPPRG00000007797) #21 CDK5RAP1 (ENSPPRG00000007463) #22 ENSPPRG00000006537 ##23 BPIFB1 (ENSPPRG00000005709) #23 BPIFA1 (ENSPPRG00000004405) #24 BPIFA3 (ENSPPRG00000003416) #25 ENSPPRG00000003204 BPIFB4 (ENSPPRG00000003010) #28 BPIFB3 (ENSPPRG00000002108) #29 BPIFB6 (ENSPPRG00000000780) #30 BPIFB2 (ENSPPRG00000000479) #31 SUN5 (ENSPPRG00000000075) #32 EFCAB8 (ENSPPRG00000020444) #33 MAPRE1 (ENSPPRG00000019866) #34 DNMT3B (ENSPPRG00000014375) #35 COMMD7 (ENSPPRG00000011687) #36 NOL4L (ENSPPRG00000010808) lion MODERN SPECIES 3 DYNLRB1 (ENSPLOG00000017257) ITCH (ENSPLOG00000017081) ENSPLOG00000016963 ASIP (ENSPLOG00000016919) EIF2S2 (ENSPLOG00000016881) RALY (ENSPLOG00000016811) CHMP4B (ENSPLOG00000016734) ZNF341 (ENSPLOG00000016700) PXMP4 (ENSPLOG00000016650) E2F1 (ENSPLOG00000016585) ACTL10 (ENSPLOG00000016575) ENSPLOG00000016536 NECAB3 (ENSPLOG00000016443) CBFA2T2 (ENSPLOG00000016366) SNTA1 (ENSPLOG00000016287) #21 CDK5RAP1 (ENSPLOG00000016219) #22 ENSPLOG00000016115 ##23 BPIFB1 (ENSPLOG00000016033) #23 BPIFA1 (ENSPLOG00000015860) #24 BPIFA3 (ENSPLOG00000015799) #25 ENSPLOG00000015750 BPIFA2 (ENSPLOG00000015684) #27 BPIFB4 (ENSPLOG00000015542) #28 BPIFB3 (ENSPLOG00000015334) #29 BPIFB6 (ENSPLOG00000015103) #30 BPIFB2 (ENSPLOG00000014965) #31 SUN5 (ENSPLOG00000014700) #32 EFCAB8 (ENSPLOG00000014634) #33 MAPRE1 (ENSPLOG00000014581) #34 DNMT3B (ENSPLOG00000014171) #35 COMMD7 (ENSPLOG00000013968) #36 Cat MODERN SPECIES 2 MAP1LC3A (ENSFCAG00000022040) DYNLRB1 (ENSFCAG00000002304) ITCH (ENSFCAG00000008780) AHCY (ENSFCAG00000007301) ASIP (ENSFCAG00000011037) RALY (ENSFCAG00000025252) EIF2S2 (ENSFCAG00000026834) CHMP4B (ENSFCAG00000025893) ZNF341 (ENSFCAG00000018478) E2F1 (ENSFCAG00000005016) NECAB3 (ENSFCAG00000005010) ACTL10 (ENSFCAG00000005015) CA3H20orf144 (ENSFCAG00000021903) CBFA2T2 (ENSFCAG00000030382) SNTA1 (ENSFCAG00000026500) #21 CDK5RAP1 (ENSFCAG00000015197) #22 ENSFCAG00000049613 ENSFCAG00000030030 BPIFA1 (ENSFCAG00000015193) #24 BPIFA3 (ENSFCAG00000022440) #25 ENSFCAG00000015188 BPIFA2 (ENSFCAG00000043660) #27 BPIFB4 (ENSFCAG00000015185) #28 BPIFB3 (ENSFCAG00000015183) #29 BPIFB6 (ENSFCAG00000015181) #30 BPIFB2 (ENSFCAG00000015179) #31 SUN5 (ENSFCAG00000025943) #32 EFCAB8 (ENSFCAG00000037633) #33 MAPRE1 (ENSFCAG00000007783) #34 DNMT3B (ENSFCAG00000007779) #35 ENSFCAG00000044277 #36 Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 Equus ANCESTRAL SPECIES 8 ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT01050000245239.e.b ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b.a #23 ENSGT01100000263546.d.b.a.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.a.a.a.b.a #24 ENSGT01100000263546.d.a ##23 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 Donkey MODERN SPECIES 6 ENSEASG00005037670 ENSEASG00005028379 ENSEASG00005033842 ASIP (ENSEASG00005024850) EIF2S2 (ENSEASG00005008498) RALY (ENSEASG00005008501) ENSEASG00005034253 ZNF341 (ENSEASG00005008514) PXMP4 (ENSEASG00005035010) E2F1 (ENSEASG00005008538) ENSEASG00005032176 ENSEASG00005008547 NECAB3 (ENSEASG00005008543) CBFA2T2 (ENSEASG00005008552) SNTA1 (ENSEASG00005008555) #21 CDK5RAP1 (ENSEASG00005008558) #22 ENSEASG00005036966 ##23 BPIFB1 (ENSEASG00005026747) #23 BPIFA3 (ENSEASG00005008570) #25 ENSEASG00005028659 ENSEASG00005004350 #24 ENSEASG00005034954 ##23 BPIFA2 (ENSEASG00005007789) #27 ENSEASG00005037736 BPIFB4 (ENSEASG00005004467) #28 BPIFB3 (ENSEASG00005004457) #29 BPIFB6 (ENSEASG00005004435) #30 BPIFB2 (ENSEASG00005004416) #31 SUN5 (ENSEASG00005004397) #32 EFCAB8 (ENSEASG00005004382) #33 MAPRE1 (ENSEASG00005004369) #34 Horse MODERN SPECIES 14 ENSECAG00000060369 ENSECAG00000020551 ENSECAG00000055038 ASIP (ENSECAG00000004241) ENSECAG00000040547 EIF2S2 (ENSECAG00000050295) RALY (ENSECAG00000012357) CHMP4B (ENSECAG00000008311) ZNF341 (ENSECAG00000000301) PXMP4 (ENSECAG00000024954) ACTL10 (ENSECAG00000001232) ENSECAG00000049637 NECAB3 (ENSECAG00000012086) CBFA2T2 (ENSECAG00000025052) SNTA1 (ENSECAG00000057698) #21 SNTA1 (ENSECAG00000020715) #22 ENSECAG00000000778 ##23 ENSECAG00000023336 #23 ENSECAG00000041183 #24 ENSECAG00000020661 #25 ENSECAG00000027711 #25 ENSECAG00000014407 #23 ENSECAG00000053425 ENSECAG00000037593 #24 ENSECAG00000022575 #24 ENSECAG00000041946 #24 ENSECAG00000044582 ##23 BPIFA2 (ENSECAG00000000297) #27 LATH (ENSECAG00000033314) ##23 ENSECAG00000033869 #27 ENSECAG00000045050 ##23 Chiroptera ANCESTRAL SPECIES 7 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00930000151259 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c Microchiroptera ANCESTRAL SPECIES 6 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00490000043329.a.a.a.pb #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a.j Microbat MODERN SPECIES 997 ITCH (ENSMLUG00000004798) AHCY (ENSMLUG00000001070) ASIP (ENSMLUG00000001062) EIF2S2 (ENSMLUG00000005335) ENSMLUG00000005330 CHMP4B (ENSMLUG00000015397) ENSMLUG00000027593 ZNF341 (ENSMLUG00000015386) PXMP4 (ENSMLUG00000015379) E2F1 (ENSMLUG00000015371) ACTL10 (ENSMLUG00000023024) NECAB3 (ENSMLUG00000015354) CBFA2T2 (ENSMLUG00000015344) ENSMLUG00000023956 SNTA1 (ENSMLUG00000005643) #21 CDK5RAP1 (ENSMLUG00000005632) #22 ENSMLUG00000003825 ENSMLUG00000029998 ##23 ENSMLUG00000003811 BPIFA1 (ENSMLUG00000000670) #24 BPIFA3 (ENSMLUG00000000658) #25 ENSMLUG00000016865 #27 BPIFB4 (ENSMLUG00000016442) #28 BPIFB3 (ENSMLUG00000016437) #29 ENSMLUG00000016424 #30 BPIFB2 (ENSMLUG00000016415) #31 SUN5 (ENSMLUG00000016408) #32 MAPRE1 (ENSMLUG00000016403) #34 DNMT3B (ENSMLUG00000016384) #35 COMMD7 (ENSMLUG00000013887) #36 NOL4L (ENSMLUG00000001048) Greater horseshoe bat MODERN SPECIES 15 ITCH (ENSRFEG00010007315) AHCY (ENSRFEG00010007632) ASIP (ENSRFEG00010007692) EIF2S2 (ENSRFEG00010007720) RALY (ENSRFEG00010007771) CHMP4B (ENSRFEG00010007840) ENSRFEG00010007891 ZNF341 (ENSRFEG00010007927) PXMP4 (ENSRFEG00010008002) E2F1 (ENSRFEG00010008064) NECAB3 (ENSRFEG00010008150) ACTL10 (ENSRFEG00010008302) C20orf144 (ENSRFEG00010008315) CBFA2T2 (ENSRFEG00010008347) SNTA1 (ENSRFEG00010008565) #21 CDK5RAP1 (ENSRFEG00010008644) #22 BPIFB1 (ENSRFEG00010008738) #23 ENSRFEG00010008900 #24 BPIFA3 (ENSRFEG00010009054) #25 BPIFA2 (ENSRFEG00010009183) #27 BPIFB4 (ENSRFEG00010009259) #28 BPIFB3 (ENSRFEG00010009403) #29 BPIFB6 (ENSRFEG00010009586) #30 BPIFB2 (ENSRFEG00010009739) #31 SUN5 (ENSRFEG00010009894) #32 MAPRE1 (ENSRFEG00010010133) #34 DNMT3B (ENSRFEG00010010315) #35 COMMD7 (ENSRFEG00010010850) #36 NOL4L (ENSRFEG00010011006) ASXL1 (ENSRFEG00010011119) KIF3B (ENSRFEG00010011227) Megabat MODERN SPECIES 372 CHMP4B (ENSPVAG00000010293) ZNF341 (ENSPVAG00000010292) PXMP4 (ENSPVAG00000010291) E2F1 (ENSPVAG00000010290) C20orf144 (ENSPVAG00000010288) NECAB3 (ENSPVAG00000010287) CBFA2T2 (ENSPVAG00000010286) SNTA1 (ENSPVAG00000010285) #21 CDK5RAP1 (ENSPVAG00000010283) #22 ENSPVAG00000010282 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000160361 #22 Common shrew MODERN SPECIES 1858 CDK5RAP1 (ENSSARG00000001599) #22 Hedgehog MODERN SPECIES 539 CDK5RAP1 (ENSEEUG00000014180) #22 Atlantogenata ANCESTRAL SPECIES 6 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 ENSGT00490000043329.a.a.a #34 Xenarthra ANCESTRAL SPECIES 316 ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 Sloth MODERN SPECIES 388 CDK5RAP1 (ENSCHOG00000009866) #22 Armadillo MODERN SPECIES 1934 ENSDNOG00000048473 EIF2S2 (ENSDNOG00000047014) ENSDNOG00000003227 ENSDNOG00000038139 CHMP4B (ENSDNOG00000032154) ZNF341 (ENSDNOG00000034368) PXMP4 (ENSDNOG00000007975) E2F1 (ENSDNOG00000046733) ACTL10 (ENSDNOG00000032070) ENSDNOG00000007969 NECAB3 (ENSDNOG00000039751) CBFA2T2 (ENSDNOG00000007950) SNTA1 (ENSDNOG00000040663) #21 ENSDNOG00000043650 CDK5RAP1 (ENSDNOG00000015236) #22 ENSDNOG00000039006 Afrotheria ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 ENSGT00490000043329.a.a.a #34 Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00390000011067.A ENSGT00940000157014 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00940000154663 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00940000162922 ENSGT00390000013020 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b #21 ENSGT00940000160361 #22 ENSGT00940000164301 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.a.a.b #25 ENSGT00510000049750 #26 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00930000151259 ENSGT00490000043329.a.a.a #34 Elephant MODERN SPECIES 180 DYNLRB1 (ENSLAFG00000029820) ITCH (ENSLAFG00000011603) ENSLAFG00000028026 ASIP (ENSLAFG00000005229) EIF2S2 (ENSLAFG00000016639) RALY (ENSLAFG00000000321) CHMP4B (ENSLAFG00000022958) ZNF341 (ENSLAFG00000007128) PXMP4 (ENSLAFG00000004616) E2F1 (ENSLAFG00000018114) ACTL10 (ENSLAFG00000018108) ENSLAFG00000018104 NECAB3 (ENSLAFG00000018096) CBFA2T2 (ENSLAFG00000018088) SNTA1 (ENSLAFG00000027816) #21 CDK5RAP1 (ENSLAFG00000001172) #22 ENSLAFG00000014548 ENSLAFG00000028139 ##23 BPIFB1 (ENSLAFG00000010267) #23 BPIFA1 (ENSLAFG00000010265) #24 ENSLAFG00000003615 #25 ENSLAFG00000000105 #27 BPIFB4 (ENSLAFG00000002061) #28 BPIFB3 (ENSLAFG00000018176) #29 BPIFB6 (ENSLAFG00000028326) #30 BPIFB2 (ENSLAFG00000008987) #31 SUN5 (ENSLAFG00000021496) #32 ENSLAFG00000032038 #33 ENSLAFG00000020535 MAPRE1 (ENSLAFG00000015453) #34 DNMT3B (ENSLAFG00000016965) #35 Hyrax MODERN SPECIES 337 CDK5RAP1 (ENSPCAG00000005484) #22 Tenrec MODERN SPECIES 477 CDK5RAP1 (ENSETEG00000015493) #22 Marsupialia ANCESTRAL SPECIES 9 ENSGT00950000183202.a.a ENSGT00940000160596 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.b ENSGT01100000263545.a.a.b ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 Opossum MODERN SPECIES RBL1 (ENSMODG00000000374) ENSMODG00000000337 RPN2 (ENSMODG00000000314) GHRH (ENSMODG00000044303) MANBAL (ENSMODG00000000253) SRC (ENSMODG00000000247) BLCAP (ENSMODG00000023609) CTNNBL1 (ENSMODG00000000226) VSTM2L (ENSMODG00000000218) TTI1 (ENSMODG00000000214) RPRD1B (ENSMODG00000000210) TGM2 (ENSMODG00000000203) ENSMODG00000000195 ENSMODG00000025745 LBP (ENSMODG00000000183) CDK5RAP1 (ENSMODG00000000175) #22 ENSMODG00000000148 #23 ENSMODG00000000138 #24 BPIFB4 (ENSMODG00000000057) #28 BPIFB3 (ENSMODG00000000050) #29 ENSMODG00000025746 #31 ENSMODG00000000018 #32 ENSMODG00000028976 #33 MAPRE1 (ENSMODG00000019445) #34 DNMT3B (ENSMODG00000019447) #35 COMMD7 (ENSMODG00000019450) #36 NOL4L (ENSMODG00000019455) ASXL1 (ENSMODG00000019457) KIF3B (ENSMODG00000019460) POFUT1 (ENSMODG00000019462) PLAGL2 (ENSMODG00000040047) Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00950000183202.a.a ENSGT00940000160596 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.b ENSGT01100000263545.a.a.b.u ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00950000183202.a.a ENSGT00940000160596 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.b ENSGT01100000263545.a.a.b.u ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00950000183202.a.a ENSGT00940000160596 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00390000003422 ENSGT00940000158250 ENSGT00390000014105 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.b ENSGT01100000263545.a.a.b.u ENSGT00940000160361 #22 ENSGT01100000263546.d.b.b #23 ENSGT01100000263546.d.b.a.a.a.a #24 ENSGT01100000263546.d.b.a.b #27 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000155225 #32 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a Common wonbat MODERN SPECIES 1023 RALGAPB (ENSVURG00010013555) RBL1 (ENSVURG00010013537) MROH8 (ENSVURG00010013467) RPN2 (ENSVURG00010013432) MANBAL (ENSVURG00010013423) SRC (ENSVURG00010013408) BLCAP (ENSVURG00010013396) CTNNBL1 (ENSVURG00010013367) VSTM2L (ENSVURG00010013359) TTI1 (ENSVURG00010013348) RPRD1B (ENSVURG00010013332) TGM2 (ENSVURG00010013317) ENSVURG00010013305 ENSVURG00010013290 ENSVURG00010013283 CDK5RAP1 (ENSVURG00010013271) #22 ENSVURG00010013265 #23 ENSVURG00010013262 koala MODERN SPECIES 39 RPN2 (ENSPCIG00000024303) ENSPCIG00000024306 MANBAL (ENSPCIG00000024309) SRC (ENSPCIG00000024313) BLCAP (ENSPCIG00000037098) CTNNBL1 (ENSPCIG00000019011) VSTM2L (ENSPCIG00000033711) TTI1 (ENSPCIG00000019008) RPRD1B (ENSPCIG00000019006) TGM2 (ENSPCIG00000019003) ENSPCIG00000023862 ENSPCIG00000016618 ENSPCIG00000016622 ENSPCIG00000012777 ENSPCIG00000012783 CDK5RAP1 (ENSPCIG00000012785) #22 ENSPCIG00000012788 #23 ENSPCIG00000012445 #24 ENSPCIG00000024432 #31 ENSPCIG00000024433 #32 ENSPCIG00000012987 ##23 ENSPCIG00000025811 #33 MAPRE1 (ENSPCIG00000025808) #34 DNMT3B (ENSPCIG00000025372) #35 COMMD7 (ENSPCIG00000025344) #36 NOL4L (ENSPCIG00000025340) ASXL1 (ENSPCIG00000025336) KIF3B (ENSPCIG00000025332) POFUT1 (ENSPCIG00000008184) PLAGL2 (ENSPCIG00000008187) TM9SF4 (ENSPCIG00000008189) Wallaby MODERN SPECIES 1093 CDK5RAP1 (ENSMEUG00000010199) #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000016755 RBL1 (ENSSHAG00000016934) MROH8 (ENSSHAG00000017043) RPN2 (ENSSHAG00000017138) ENSSHAG00000017258 ENSSHAG00000029848 SRC (ENSSHAG00000021143) CTNNBL1 (ENSSHAG00000017866) VSTM2L (ENSSHAG00000018116) TTI1 (ENSSHAG00000018256) RPRD1B (ENSSHAG00000021829) ENSSHAG00000018388 ENSSHAG00000018537 ENSSHAG00000006950 ENSSHAG00000006508 ENSSHAG00000004269 #22 ENSSHAG00000000325 #23 ENSSHAG00000001005 ENSSHAG00000005212 BPIFB4 (ENSSHAG00000006587) #28 BPIFB3 (ENSSHAG00000007109) #29 ENSSHAG00000008355 #32 ENSSHAG00000001553 #33 MAPRE1 (ENSSHAG00000004541) #34 DNMT3B (ENSSHAG00000005171) #35 COMMD7 (ENSSHAG00000027760) #36 NOL4L (ENSSHAG00000030252) ASXL1 (ENSSHAG00000009893) KIF3B (ENSSHAG00000010523) POFUT1 (ENSSHAG00000011051) PLAGL2 (ENSSHAG00000011174) Platypus MODERN SPECIES 13 ENSOANG00000036840 GAS7 (ENSOANG00000036957) RCVRN (ENSOANG00000049018) GLP2R (ENSOANG00000040079) DHRS7C (ENSOANG00000028736) BLCAP (ENSOANG00000042373) SRC (ENSOANG00000048480) ENSOANG00000001985 ENSOANG00000044487 RPN2 (ENSOANG00000042541) CTNNBL1 (ENSOANG00000047092) ENSOANG00000045554 ENSOANG00000040383 TGM2 (ENSOANG00000038661) ENSOANG00000049954 CDK5RAP1 (ENSOANG00000042488) #22 BPIFB3 (ENSOANG00000037352) #29 ENSOANG00000007785 #32 MAPRE1 (ENSOANG00000040747) #34 DNMT3B (ENSOANG00000012120) #35 COMMD7 (ENSOANG00000047119) #36 NOL4L (ENSOANG00000046413) ENSOANG00000049224 KIF3B (ENSOANG00000038148) ENSOANG00000004509 ENSOANG00000036104 TM9SF4 (ENSOANG00000045817) HCK (ENSOANG00000040377) ENSOANG00000049509 XKR7 (ENSOANG00000044482) PDRG1 (ENSOANG00000020250) Sauria ANCESTRAL SPECIES 16 ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT01100000263895 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 Archelosauria ANCESTRAL SPECIES ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 Cryptodira ANCESTRAL SPECIES 26 ENSGT00530000063759.b ENSGT00940000153541.C ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b Testudinoidea ANCESTRAL SPECIES 25 ENSGT00530000063759.b ENSGT00940000153541.C ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT00730000111410 ENSGT00940000164331.g.a.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928.m #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b Emydidae ANCESTRAL SPECIES 31 ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT01000000216482 ENSGT01100000263760.a ENSGT00730000111410 ENSGT00940000164331.g.a.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928.m #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b painted turtle MODERN SPECIES 791 ENSCPBG00000027309 ENSCPBG00000027312 ENSCPBG00000027314 ENSCPBG00000027316 ENSCPBG00000027317 ENSCPBG00000027318 ENSCPBG00000027320 ENSCPBG00000027321 CTNNBL1 (ENSCPBG00000027334) VSTM2L (ENSCPBG00000027394) TTI1 (ENSCPBG00000027400) RPRD1B (ENSCPBG00000027402) TGM2 (ENSCPBG00000027403) KIAA1755 (ENSCPBG00000027406) ENSCPBG00000027409 CDK5RAP1 (ENSCPBG00000027417) #22 BPIFB3 (ENSCPBG00000027451) #29 ENSCPBG00000027452 ##23 EFCAB8 (ENSCPBG00000027455) #33 MAPRE1 (ENSCPBG00000027459) #34 ENSCPBG00000027461 #35 COMMD7 (ENSCPBG00000027466) #36 NOL4L (ENSCPBG00000027468) ASXL1 (ENSCPBG00000027473) KIF3B (ENSCPBG00000027475) POFUT1 (ENSCPBG00000027477) PLAGL2 (ENSCPBG00000027479) TM9SF4 (ENSCPBG00000027482) HCK (ENSCPBG00000027487) CCM2L (ENSCPBG00000027494) XKR7 (ENSCPBG00000027498) Three-toed box turtle MODERN SPECIES 60 ENSTMTG00000009004 ENSTMTG00000009017 ENSTMTG00000009029 ENSTMTG00000009047 ENSTMTG00000009058 ENSTMTG00000009078 ENSTMTG00000009089 WFDC2 (ENSTMTG00000009105) ENSTMTG00000009122 CTNNBL1 (ENSTMTG00000009170) VSTM2L (ENSTMTG00000009499) RPRD1B (ENSTMTG00000009522) TGM2 (ENSTMTG00000009542) KIAA1755 (ENSTMTG00000009553) ENSTMTG00000009620 CDK5RAP1 (ENSTMTG00000009710) #22 BPIFB4 (ENSTMTG00000010336) #28 MAPRE1 (ENSTMTG00000010375) #34 ENSTMTG00000010404 #35 COMMD7 (ENSTMTG00000010480) #36 NOL4L (ENSTMTG00000010567) ASXL1 (ENSTMTG00000010586) KIF3B (ENSTMTG00000010607) POFUT1 (ENSTMTG00000010633) PLAGL2 (ENSTMTG00000010654) TM9SF4 (ENSTMTG00000010670) HCK (ENSTMTG00000010719) CCM2L (ENSTMTG00000010744) XKR7 (ENSTMTG00000010774) PDRG1 (ENSTMTG00000010789) TTLL9 (ENSTMTG00000010805) Testudinidae ANCESTRAL SPECIES 28 ENSGT00530000063759.b ENSGT00940000153541.C ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT00940000164331.g.b.b ENSGT00940000164331.g.a.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928.m #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 Abingdon island giant tortoise MODERN SPECIES 2375 ENSCABG00000005152 ENSCABG00000005149 ENSCABG00000005146 ENSCABG00000005144 ENSCABG00000005140 ENSCABG00000005137 ENSCABG00000005133 ENSCABG00000005128 CTNNBL1 (ENSCABG00000004428) VSTM2L (ENSCABG00000004396) TTI1 (ENSCABG00000004390) RPRD1B (ENSCABG00000004382) TGM2 (ENSCABG00000004279) KIAA1755 (ENSCABG00000004275) ENSCABG00000004265 CDK5RAP1 (ENSCABG00000003990) #22 BPIFB4 (ENSCABG00000003966) #28 EFCAB8 (ENSCABG00000003961) #33 MAPRE1 (ENSCABG00000003956) #34 ENSCABG00000003950 #35 COMMD7 (ENSCABG00000003852) #36 NOL4L (ENSCABG00000003839) ENSCABG00000003831 ALDH1L2 (ENSCABG00000003575) ENSCABG00000003558 SLC41A2 (ENSCABG00000003555) ENSCABG00000003551 Goode s thornscrub tortoise MODERN SPECIES 5 ENSGEVG00005006023 ENSGEVG00005006109 ENSGEVG00005006306 ENSGEVG00005006329 ENSGEVG00005006353 ENSGEVG00005006369 ENSGEVG00005006403 ENSGEVG00005006459 CTNNBL1 (ENSGEVG00005006488) VSTM2L (ENSGEVG00005006524) TTI1 (ENSGEVG00005006567) RPRD1B (ENSGEVG00005006622) TGM2 (ENSGEVG00005006650) KIAA1755 (ENSGEVG00005006681) ENSGEVG00005006737 CDK5RAP1 (ENSGEVG00005006918) #22 MAPRE1 (ENSGEVG00005007376) #34 ENSGEVG00005007406 #35 COMMD7 (ENSGEVG00005007474) #36 NOL4L (ENSGEVG00005007510) ASXL1 (ENSGEVG00005007573) KIF3B (ENSGEVG00005007627) POFUT1 (ENSGEVG00005007660) PLAGL2 (ENSGEVG00005007687) TM9SF4 (ENSGEVG00005007706) HCK (ENSGEVG00005007752) CCM2L (ENSGEVG00005007799) XKR7 (ENSGEVG00005007887) PDRG1 (ENSGEVG00005007935) TTLL9 (ENSGEVG00005007967) DUSP15 (ENSGEVG00005008062) Archosauria ANCESTRAL SPECIES 13 ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 ENSGT00940000159879 Aves ANCESTRAL SPECIES 16 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT00940000171139 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 Neognathae ANCESTRAL SPECIES 16 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 Neognathae_b ANCESTRAL SPECIES 17 ENSGT00510000047836 ENSGT01030000235067 ENSGT00940000167544 ENSGT01030000238626 ENSGT01040000240605 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b.n Neognathae_c ANCESTRAL SPECIES 20 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT00940000167544 ENSGT01040000240605 ENSGT01100000263895 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT00940000171139 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b.n Golden eagle MODERN SPECIES 19 DNTTIP1 (ENSACCG00020006037) ENSACCG00020006067 ENSACCG00020006082 ENSACCG00020006132 ENSACCG00020006147 ENSACCG00020006163 WFDC2 (ENSACCG00020006178) ENSACCG00020006187 CTNNBL1 (ENSACCG00020006203) VSTM2L (ENSACCG00020006216) TTI1 (ENSACCG00020006232) RPRD1B (ENSACCG00020006247) TGM2 (ENSACCG00020006264) KIAA1755 (ENSACCG00020006285) ENSACCG00020006303 CDK5RAP1 (ENSACCG00020006330) #22 ENSACCG00020006350 BPIFB4 (ENSACCG00020006360) #28 ENSACCG00020006374 ENSACCG00020006415 ENSACCG00020006475 ##23 MAPRE1 (ENSACCG00020006493) #34 DNMT3B (ENSACCG00020006511) #35 COMMD7 (ENSACCG00020006538) #36 NOL4L (ENSACCG00020006566) ASXL1 (ENSACCG00020006611) KIF3B (ENSACCG00020006643) POFUT1 (ENSACCG00020006659) PLAGL2 (ENSACCG00020006675) TM9SF4 (ENSACCG00020006695) HCK (ENSACCG00020006721) Kakapo MODERN SPECIES 5 ACOT8 (ENSSHBG00005006375) SNX21 (ENSSHBG00005006360) TNNC2 (ENSSHBG00005006212) ENSSHBG00005006168 DNTTIP1 (ENSSHBG00005006146) ENSSHBG00005006112 ENSSHBG00005006059 WFDC2 (ENSSHBG00005006019) CTNNBL1 (ENSSHBG00005006007) VSTM2L (ENSSHBG00005005994) TTI1 (ENSSHBG00005005973) RPRD1B (ENSSHBG00005005953) TGM2 (ENSSHBG00005005913) ENSSHBG00005005877 ENSSHBG00005005844 CDK5RAP1 (ENSSHBG00005005832) #22 ENSSHBG00005005812 BPIFB4 (ENSSHBG00005005784) #28 ENSSHBG00005005609 ENSSHBG00005005545 ##23 MAPRE1 (ENSSHBG00005005517) #34 DNMT3B (ENSSHBG00005005489) #35 COMMD7 (ENSSHBG00005005461) #36 NOL4L (ENSSHBG00005005437) ASXL1 (ENSSHBG00005005401) KIF3B (ENSSHBG00005000705) POFUT1 (ENSSHBG00005013729) PLAGL2 (ENSSHBG00005013716) TM9SF4 (ENSSHBG00005013704) HCK (ENSSHBG00005013688) CCM2L (ENSSHBG00005013677) Passeriformes ANCESTRAL SPECIES 19 ENSGT00940000153541.C ENSGT00960000189768 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT00940000165527 ENSGT00730000111410 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT00940000171139 ENSGT01040000241475 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b.n ENSGT01070000253766.B Great tit MODERN SPECIES 12 UBE2C (ENSPMJG00000005897) ENSPMJG00000005898 DNTTIP1 (ENSPMJG00000005900) ENSPMJG00000005902 ENSPMJG00000005903 ENSPMJG00000005904 ENSPMJG00000005914 ENSPMJG00000005915 CTNNBL1 (ENSPMJG00000005916) VSTM2L (ENSPMJG00000005917) TTI1 (ENSPMJG00000005919) RPRD1B (ENSPMJG00000005920) TGM2 (ENSPMJG00000005921) KIAA1755 (ENSPMJG00000005923) ENSPMJG00000005924 CDK5RAP1 (ENSPMJG00000005926) #22 ENSPMJG00000005953 ENSPMJG00000005961 ENSPMJG00000006065 MAPRE1 (ENSPMJG00000006071) #34 DNMT3B (ENSPMJG00000006074) #35 COMMD7 (ENSPMJG00000006087) #36 NOL4L (ENSPMJG00000006094) ASXL1 (ENSPMJG00000006107) KIF3B (ENSPMJG00000006110) POFUT1 (ENSPMJG00000006113) PLAGL2 (ENSPMJG00000006114) TM9SF4 (ENSPMJG00000006116) HCK (ENSPMJG00000006126) CCM2L (ENSPMJG00000006892) XKR7 (ENSPMJG00000006898) Passeriformes_d ANCESTRAL SPECIES 19 ENSGT00960000189768 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT01100000263895 ENSGT00940000165527 ENSGT00730000111410 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a.d ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT00940000171139 ENSGT01040000241475 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b.n ENSGT00390000016168.b.m Flycatcher MODERN SPECIES 12 TNNC2 (ENSFALG00000023968) ENSFALG00000004502 UBE2C (ENSFALG00000004562) DNTTIP1 (ENSFALG00000004552) ENSFALG00000028389 ENSFALG00000004528 ENSFALG00000026519 ENSFALG00000023093 ENSFALG00000024924 VSTM2L (ENSFALG00000004492) TTI1 (ENSFALG00000004488) RPRD1B (ENSFALG00000004481) TGM2 (ENSFALG00000004413) KIAA1755 (ENSFALG00000004389) ENSFALG00000005245 ENSFALG00000005287 #22 ENSFALG00000005266 ENSFALG00000024833 ENSFALG00000029084 #29 ENSFALG00000005327 ##23 ENSFALG00000005319 MAPRE1 (ENSFALG00000005336) #34 DNMT3B (ENSFALG00000005358) #35 COMMD7 (ENSFALG00000023926) #36 NOL4L (ENSFALG00000005386) ASXL1 (ENSFALG00000005409) KIF3B (ENSFALG00000005426) POFUT1 (ENSFALG00000005434) PLAGL2 (ENSFALG00000026625) TM9SF4 (ENSFALG00000005457) HCK (ENSFALG00000005462) Passeriformes_g ANCESTRAL SPECIES 19 ENSGT00960000189768 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT01100000263895 ENSGT00940000165527 ENSGT00730000111410 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a.d ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT00940000171139 ENSGT01040000241475 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 Medium ground finch MODERN SPECIES 40 NEURL2 (ENSGFOG00000002323) ACOT8 (ENSGFOG00000002298) TNNC2 (ENSGFOG00000002257) ENSGFOG00000002231 UBE2C (ENSGFOG00000002221) DNTTIP1 (ENSGFOG00000002201) ENSGFOG00000002188 ENSGFOG00000002160 WFDC2 (ENSGFOG00000002142) CTNNBL1 (ENSGFOG00000002044) TTI1 (ENSGFOG00000002015) RPRD1B (ENSGFOG00000002002) TGM2 (ENSGFOG00000001990) KIAA1755 (ENSGFOG00000001976) ENSGFOG00000001970 CDK5RAP1 (ENSGFOG00000001964) #22 ENSGFOG00000001816 ENSGFOG00000001786 MAPRE1 (ENSGFOG00000001779) #34 DNMT3B (ENSGFOG00000001594) #35 COMMD7 (ENSGFOG00000001563) #36 NOL4L (ENSGFOG00000001552) ASXL1 (ENSGFOG00000001530) KIF3B (ENSGFOG00000001523) POFUT1 (ENSGFOG00000001515) PLAGL2 (ENSGFOG00000001511) TM9SF4 (ENSGFOG00000001350) HCK (ENSGFOG00000001312) ENSGFOG00000001303 XKR7 (ENSGFOG00000001273) PDRG1 (ENSGFOG00000001251) Passeroidea ANCESTRAL SPECIES 18 ENSGT00960000189768 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT01040000240605 ENSGT01100000263895 ENSGT00940000165527 ENSGT00730000111410 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a.d ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT00940000171139 ENSGT01040000241475 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 Common canary MODERN SPECIES 21 ACOT8 (ENSSCAG00000013908) SNX21 (ENSSCAG00000013914) TNNC2 (ENSSCAG00000013918) UBE2C (ENSSCAG00000013926) DNTTIP1 (ENSSCAG00000013937) ENSSCAG00000013951 ENSSCAG00000013955 ENSSCAG00000013961 ENSSCAG00000013965 CTNNBL1 (ENSSCAG00000013976) VSTM2L (ENSSCAG00000014015) TTI1 (ENSSCAG00000014026) RPRD1B (ENSSCAG00000014029) TGM2 (ENSSCAG00000014047) ENSSCAG00000014081 CDK5RAP1 (ENSSCAG00000014099) #22 ENSSCAG00000014148 ENSSCAG00000014194 MAPRE1 (ENSSCAG00000014198) #34 DNMT3B (ENSSCAG00000014202) #35 COMMD7 (ENSSCAG00000014210) #36 ENSSCAG00000014219 ENSSCAG00000014222 ASXL1 (ENSSCAG00000014227) KIF3B (ENSSCAG00000014238) POFUT1 (ENSSCAG00000014245) PLAGL2 (ENSSCAG00000014251) TM9SF4 (ENSSCAG00000014255) HCK (ENSSCAG00000014263) ENSSCAG00000014271 ENSSCAG00000014277 Zebra finch MODERN SPECIES 13 TNNC2 (ENSTGUG00000006171) ENSTGUG00000023352 UBE2C (ENSTGUG00000029725) DNTTIP1 (ENSTGUG00000006183) ENSTGUG00000023456 ENSTGUG00000027092 ENSTGUG00000019414 ENSTGUG00000025806 ENSTGUG00000020346 CTNNBL1 (ENSTGUG00000006202) VSTM2L (ENSTGUG00000024728) RPRD1B (ENSTGUG00000006251) TGM2 (ENSTGUG00000006260) KIAA1755 (ENSTGUG00000024924) ENSTGUG00000006309 CDK5RAP1 (ENSTGUG00000006328) #22 ENSTGUG00000022715 ENSTGUG00000006367 #31 ENSTGUG00000006381 ##23 MAPRE1 (ENSTGUG00000006394) #34 DNMT3B (ENSTGUG00000006412) #35 COMMD7 (ENSTGUG00000006445) #36 NOL4L (ENSTGUG00000006469) ASXL1 (ENSTGUG00000006483) KIF3B (ENSTGUG00000006498) POFUT1 (ENSTGUG00000018539) PLAGL2 (ENSTGUG00000025001) TM9SF4 (ENSTGUG00000006532) HCK (ENSTGUG00000006558) ENSTGUG00000006597 CCM2L (ENSTGUG00000026267) Galloanserae ANCESTRAL SPECIES 15 ENSGT00960000189768 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00510000047836 ENSGT01030000238591 ENSGT01100000263895 ENSGT00730000111410 ENSGT00940000164331.g.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 Phasianidae ANCESTRAL SPECIES 15 ENSGT00960000189768 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT00940000167544 ENSGT01030000238626 ENSGT01070000256035 ENSGT00940000165527 ENSGT00730000111410 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 Japanese quail MODERN SPECIES 12 TCEA2 (ENSCJPG00005003707) SOX18 (ENSCJPG00005003719) ENSCJPG00005003720 PRPF6 (ENSCJPG00005003735) SAMD10 (ENSCJPG00005003738) ZNF512B (ENSCJPG00005003739) UCKL1 (ENSCJPG00005004001) ENSCJPG00005004269 DNAJC5 (ENSCJPG00005004272) TPD52L2 (ENSCJPG00005004290) CTNNBL1 (ENSCJPG00005004291) VSTM2L (ENSCJPG00005004547) TTI1 (ENSCJPG00005004549) RPRD1B (ENSCJPG00005004550) TGM2 (ENSCJPG00005004553) CDK5RAP1 (ENSCJPG00005004591) #22 BPIFB4 (ENSCJPG00005004606) #28 BPIFB3 (ENSCJPG00005004611) #29 ENSCJPG00005004618 #31 ENSCJPG00005005281 ##23 MAPRE1 (ENSCJPG00005005282) #34 DNMT3B (ENSCJPG00005005284) #35 COMMD7 (ENSCJPG00005005290) #36 NOL4L (ENSCJPG00005005303) ASXL1 (ENSCJPG00005005314) KIF3B (ENSCJPG00005005319) POFUT1 (ENSCJPG00005005321) PLAGL2 (ENSCJPG00005005331) TM9SF4 (ENSCJPG00005005334) HCK (ENSCJPG00005005344) CCM2L (ENSCJPG00005005796) Phasianidae_b ANCESTRAL SPECIES 15 ENSGT00940000153541.C ENSGT00960000189768 ENSGT00930000150941 ENSGT00510000047836 ENSGT01030000235067 ENSGT00940000167544 ENSGT01070000256035 ENSGT00940000165527 ENSGT00730000111410 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B ENSGT00940000161174 ENSGT00940000160361 #22 ENSGT01010000222653 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 Chicken MODERN SPECIES 12 UBE2U (ENSGALG00010015892) DNTTIP1 (ENSGALG00010015875) ENSGALG00010015859 ENSGALG00010015854 ENSGALG00010015847 ENSGALG00010015842 ENSGALG00010015836 ENSGALG00010015828 WFDC2 (ENSGALG00010015822) CTNNBL1 (ENSGALG00010015811) VSTM2L (ENSGALG00010015801) TTI1 (ENSGALG00010015764) RPRD1B (ENSGALG00010015753) TGM2 (ENSGALG00010015676) KIAA1755 (ENSGALG00010013266) CDK5RAP1 (ENSGALG00010015094) #22 ENSGALG00010015549 BPIFB4 (ENSGALG00010015511) #28 BPIFB3 (ENSGALG00010016680) #29 BPIFB6 (ENSGALG00010015502) #30 ENSGALG00010015233 #31 BPIFB3 (ENSGALG00010015205) ##23 MAPRE1 (ENSGALG00010013275) #34 DNMT3B (ENSGALG00010013394) #35 COMMD7 (ENSGALG00010013412) #36 C20H20ORF112 (ENSGALG00010013367) ASXL1 (ENSGALG00010013352) KIF3B (ENSGALG00010013331) POFUT1 (ENSGALG00010013307) PLAGL2 (ENSGALG00010013299) TM9SF4 (ENSGALG00010013289) Turkey MODERN SPECIES 14 ENSMGAG00000006536 ENSMGAG00000007298 XKR7 (ENSMGAG00000007324) ENSMGAG00000007338 ENSMGAG00000016524 TM9SF4 (ENSMGAG00000007358) ENSMGAG00000007476 ENSMGAG00000007502 ENSMGAG00000007536 ENSMGAG00000007588 ENSMGAG00000017667 ENSMGAG00000007864 ENSMGAG00000020373 ENSMGAG00000017999 #36 ENSMGAG00000007414 #35 CDK5RAP1 (ENSMGAG00000007720) #22 ENSMGAG00000007674 #28 ENSMGAG00000016865 #29 ENSMGAG00000007635 #31 ENSMGAG00000007622 ##23 ENSMGAG00000007478 #34 ENSMGAG00000007751 ENSMGAG00000007853 ENSMGAG00000007887 ENSMGAG00000017754 ENSMGAG00000007953 ENSMGAG00000003701 ENSMGAG00000003711 ENSMGAG00000021467 ENSMGAG00000022307 ENSMGAG00000017864 Anatidae ANCESTRAL SPECIES 83 ENSGT01100000263545.a.a ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.b #28 ENSGT01100000263546.e.a.b #29 ENSGT01100000263546.e.b #30 ENSGT01100000263546.e.a.a.b #31 ENSGT01100000263546.e.a.a.a.a ##23 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 Pink-footed goose MODERN SPECIES 353 ENSABRG00000020669 CDK5RAP1 (ENSABRG00000020679) #22 BPIFB4 (ENSABRG00000020688) #28 BPIFB3 (ENSABRG00000020695) #29 BPIFB6 (ENSABRG00000020700) #30 ENSABRG00000020739 #31 ENSABRG00000020870 ##23 MAPRE1 (ENSABRG00000020876) #34 DNMT3B (ENSABRG00000020884) #35 COMMD7 (ENSABRG00000020901) #36 NOL4L (ENSABRG00000020913) ASXL1 (ENSABRG00000020925) KIF3B (ENSABRG00000020935) POFUT1 (ENSABRG00000020940) PLAGL2 (ENSABRG00000020947) TM9SF4 (ENSABRG00000020956) HCK (ENSABRG00000020974) Duck MODERN SPECIES 12 STK35 (ENSAPLG00000010202) ENSAPLG00000022491 ENSAPLG00000019511 ENSAPLG00000001051 NSFL1C (ENSAPLG00000011229) SNPH (ENSAPLG00000028758) ENSAPLG00000022280 RAD21L1 (ENSAPLG00000009865) PSMF1 (ENSAPLG00000009663) ENSAPLG00000006783 CTNNBL1 (ENSAPLG00000002965) VSTM2L (ENSAPLG00000028899) TTI1 (ENSAPLG00000002738) RPRD1B (ENSAPLG00000002778) TGM2 (ENSAPLG00000001999) CDK5RAP1 (ENSAPLG00000008506) #22 ENSAPLG00000008499 ENSAPLG00000003361 #30 ENSAPLG00000003437 #31 ENSAPLG00000017837 ##23 MAPRE1 (ENSAPLG00000027095) #34 DNMT3B (ENSAPLG00000003607) #35 COMMD7 (ENSAPLG00000003939) #36 NOL4L (ENSAPLG00000004109) ASXL1 (ENSAPLG00000023194) KIF3B (ENSAPLG00000004629) POFUT1 (ENSAPLG00000004951) PLAGL2 (ENSAPLG00000005061) TM9SF4 (ENSAPLG00000005176) ENSAPLG00000029597 ENSAPLG00000029647 African ostrich MODERN SPECIES 139 CTNNBL1 (ENSSCUG00000002263) TTI1 (ENSSCUG00000002262) RPRD1B (ENSSCUG00000002261) ENSSCUG00000002259 CDK5RAP1 (ENSSCUG00000002256) #22 BPIFB4 (ENSSCUG00000002255) #28 BPIFB6 (ENSSCUG00000002253) #30 ENSSCUG00000002185 ENSSCUG00000002157 ##23 MAPRE1 (ENSSCUG00000002149) #34 DNMT3B (ENSSCUG00000002146) #35 COMMD7 (ENSSCUG00000002132) #36 NOL4L (ENSSCUG00000002120) ENSSCUG00000002119 ENSSCUG00000002117 KIF3B (ENSSCUG00000002113) ENSSCUG00000002109 POFUT1 (ENSSCUG00000002105) PLAGL2 (ENSSCUG00000002100) TM9SF4 (ENSSCUG00000002069) Lepidosauria ANCESTRAL SPECIES 6 ENSGT00940000153541.C ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT01100000263895 ENSGT00940000165527 ENSGT00730000111410 ENSGT00940000164331 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a.a ENSGT01050000244866.B ENSGT01100000263545.a.a ENSGT00940000161174 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.a.b.a #28 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B Episquamata ANCESTRAL SPECIES 1 ENSGT00390000017273.B ENSGT00390000004207 ENSGT00530000063759.b ENSGT00940000153541.C ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT00940000164331.i.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a.a ENSGT01050000244866.B ENSGT01100000263545.a.a ENSGT00940000161174 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 Toxicofera ANCESTRAL SPECIES 130 ENSGT01100000263545.a.a ENSGT00940000161174 ENSGT00940000160361 #22 Elapidae ANCESTRAL SPECIES ENSGT00940000160361 #22 Indian cobra MODERN SPECIES 130 CDK5RAP1 (ENSNNAG00000013032) #22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000160361 #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000160361 #22 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 503 ENSPTXG00000013098 #22 Eastern brown snake MODERN SPECIES 500 ENSPTXG00000012862 #22 Mainland tiger snake MODERN SPECIES 1179 CDK5RAP1 (ENSNSUG00000009139) #22 Blue-lipped sea krait MODERN SPECIES 2079 CDK5RAP1 (ENSLLTG00000001501) #22 Lizard MODERN SPECIES 1479 ENSACAG00000004501 ENSACAG00000004367 #22 Laterata ANCESTRAL SPECIES 14 ENSGT00390000004207 ENSGT00530000063759.b ENSGT00940000153541.C ENSGT00930000150941 ENSGT00510000047836 ENSGT00940000165273.b ENSGT00990000205124.D ENSGT00940000164331.i.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a.a ENSGT01050000244866.B ENSGT01100000263545.a.a ENSGT00940000161174 ENSGT00940000160361 #22 ENSGT01100000263546.e.a.a.b #31 ENSGT00940000163617 #33 ENSGT00490000043329.a.a.a #34 ENSGT00940000156928 #35 ENSGT00390000012419 #36 ENSGT00940000157729 ENSGT00520000055578.a.a.c ENSGT00940000153739.a.a ENSGT00390000015634 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 Argentine black and white tegu MODERN SPECIES 138 ENSSMRG00000010405 ENSSMRG00000010404 ENSSMRG00000010403 ENSSMRG00000010402 ENSSMRG00000010401 ENSSMRG00000010377 ENSSMRG00000010374 CTNNBL1 (ENSSMRG00000010369) VSTM2L (ENSSMRG00000010349) ENSSMRG00000010345 TTI1 (ENSSMRG00000010342) RPRD1B (ENSSMRG00000010337) TGM2 (ENSSMRG00000010336) ENSSMRG00000010329 KIAA1755 (ENSSMRG00000010328) CDK5RAP1 (ENSSMRG00000010314) #22 Common wall lizard MODERN SPECIES 14 ENSPMRG00000007116 ENSPMRG00000007106 ENSPMRG00000007101 ENSPMRG00000007085 ENSPMRG00000007076 ENSPMRG00000007073 ENSPMRG00000007050 CTNNBL1 (ENSPMRG00000006998) VSTM2L (ENSPMRG00000006971) TTI1 (ENSPMRG00000006945) RPRD1B (ENSPMRG00000006915) TGM2 (ENSPMRG00000006885) ENSPMRG00000006875 ENSPMRG00000006838 ENSPMRG00000006826 CDK5RAP1 (ENSPMRG00000006816) #22 ENSPMRG00000006804 ENSPMRG00000006797 ENSPMRG00000006779 BPIFB2 (ENSPMRG00000006743) #31 EFCAB8 (ENSPMRG00000006714) #33 MAPRE1 (ENSPMRG00000006706) #34 DNMT3B (ENSPMRG00000006635) #35 COMMD7 (ENSPMRG00000006602) #36 NOL4L (ENSPMRG00000006582) ASXL1 (ENSPMRG00000006564) KIF3B (ENSPMRG00000006551) POFUT1 (ENSPMRG00000006535) PLAGL2 (ENSPMRG00000006525) TM9SF4 (ENSPMRG00000006515) HCK (ENSPMRG00000006494) tuatara MODERN SPECIES 1812 ENSSPUG00000019032 ENSSPUG00000019030 ENSSPUG00000019028 ENSSPUG00000019026 ENSSPUG00000019024 ENSSPUG00000019015 ENSSPUG00000019011 ENSSPUG00000019009 ENSSPUG00000019005 VSTM2L (ENSSPUG00000019002) TTI1 (ENSSPUG00000018997) RPRD1B (ENSSPUG00000018992) TGM2 (ENSSPUG00000018984) ENSSPUG00000018977 ENSSPUG00000018973 #23 CDK5RAP1 (ENSSPUG00000018959) #22 BPIFB4 (ENSSPUG00000018943) #28 MAPRE1 (ENSSPUG00000018937) #34 DNMT3B (ENSSPUG00000018931) #35 COMMD7 (ENSSPUG00000018924) #36 NOL4L (ENSSPUG00000018916) ENSSPUG00000018911 KIF3B (ENSSPUG00000018906) ENSSPUG00000018901 POFUT1 (ENSSPUG00000018894) ENSSPUG00000018889 ENSSPUG00000018886 ENSSPUG00000018883 HCK (ENSSPUG00000018878) CCM2L (ENSSPUG00000018872) XKR7 (ENSSPUG00000018865) Anura ANCESTRAL SPECIES ENSGT00940000160361 #22 Leishan spiny toad MODERN SPECIES 3 TTI1 (ENSLLEG00000023243) RPRD1B (ENSLLEG00000023109) ENSLLEG00000023080 TGM2 (ENSLLEG00000022678) ENSLLEG00000022602 ENSLLEG00000022409 ENSLLEG00000022312 ENSLLEG00000022263 ENSLLEG00000022243 ENSLLEG00000022214 ENSLLEG00000021988 ENSLLEG00000021952 ENSLLEG00000021928 ENSLLEG00000021900 ENSLLEG00000021863 CDK5RAP1 (ENSLLEG00000021578) #22 ENSLLEG00000021523 ENSLLEG00000021476 ENSLLEG00000031106 ENSLLEG00000031103 ENSLLEG00000031102 ENSLLEG00000031097 #28 ENSLLEG00000031096 ENSLLEG00000031095 CANT1 (ENSLLEG00000031093) C1QTNF1 (ENSLLEG00000031092) ENSLLEG00000031091 RBFOX3 (ENSLLEG00000031086) ENSLLEG00000031081 ENSLLEG00000031079 ENSLLEG00000031077 Coelacanth MODERN SPECIES 1113 ENSLACG00000022131 ENSLACG00000008600 SLC35C2 (ENSLACG00000009110) ELMO2 (ENSLACG00000009838) SNRPB (ENSLACG00000011459) DDX27 (ENSLACG00000011592) ZNFX1 (ENSLACG00000012036) ccndbp1 (ENSLACG00000012340) CDK5RAP1 (ENSLACG00000012647) #22 ENSLACG00000012885 Actinopterygii ANCESTRAL SPECIES 185 ENSGT00940000155308 ENSGT00940000155230 ENSGT00940000156220 ENSGT00940000158052.a.h ENSGT00940000155458 ENSGT00940000160046 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00940000159708 ENSGT00940000155448 ENSGT00940000158442 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000169850 ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a Neopterygii ANCESTRAL SPECIES 44 ENSGT00940000155308 ENSGT00940000155230 ENSGT00940000156220 ENSGT00940000158052.a.h ENSGT00940000155458 ENSGT00940000160046 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00940000159708 ENSGT00940000156213 ENSGT00940000158442 ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000169850 ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a Osteoglossocephalai ANCESTRAL SPECIES 85 ENSGT00530000063859.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00940000155448.c.b ENSGT00940000159708 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00980000199174 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000165667 ENSGT00940000169850 ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000155198.B ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000162859.o ENSGT00940000158065 ENSGT00390000007605 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b Clupeocephala ANCESTRAL SPECIES 847 ENSGT00940000169850 ENSGT00940000160361 #22 Otomorpha ANCESTRAL SPECIES 842 ENSGT00940000169850 ENSGT00940000160361 #22 Clupeiformes ANCESTRAL SPECIES 28 ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000161921.e.b ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00940000155448.c.b ENSGT00940000156213.r ENSGT00940000159708 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000155343.a.b ENSGT00390000007725.A.b.c ENSGT00510000049583 ENSGT00390000011058.a.d ENSGT00730000111279 ENSGT00940000164021.A ENSGT00950000182696.B.b.a ENSGT00950000182858.C ENSGT00940000156275.f ENSGT00940000158433 ENSGT00940000166932 ENSGT00390000003768 ENSGT00940000157799 Atlantic herring MODERN SPECIES 21 ENSCHAG00000027060 ENSCHAG00000027061 pdrg1 (ENSCHAG00000027063) ENSCHAG00000027064 PPP1R3D (ENSCHAG00000027066) phactr3b (ENSCHAG00000027069) acot8 (ENSCHAG00000027074) ENSCHAG00000027081 ENSCHAG00000027084 srsf6b (ENSCHAG00000027086) sgk2a (ENSCHAG00000027097) ift52 (ENSCHAG00000027150) mybl2b (ENSCHAG00000000858) rpn2 (ENSCHAG00000001368) ENSCHAG00000004438 CDK5RAP1 (ENSCHAG00000004480) #22 ENSCHAG00000004626 ENSCHAG00000004805 KCND3 (ENSCHAG00000006548) ngfb (ENSCHAG00000006605) uts2b (ENSCHAG00000006611) ENSCHAG00000006659 ENSCHAG00000006675 ENSCHAG00000006702 A3GALT2 (ENSCHAG00000006745) znf362a (ENSCHAG00000006758) trim62.1 (ENSCHAG00000006807) ENSCHAG00000006847 ENSCHAG00000006875 MMEL1 (ENSCHAG00000006933) prxl2b (ENSCHAG00000008290) Denticle herring MODERN SPECIES 3 FAM120A (ENSDCDG00000029454) CASS4 (ENSDCDG00000029459) cstf1 (ENSDCDG00000029460) ENSDCDG00000029462 ENSDCDG00000029464 pdrg1 (ENSDCDG00000029465) ENSDCDG00000029466 PPP1R3D (ENSDCDG00000029467) phactr3b (ENSDCDG00000029468) acot8 (ENSDCDG00000029539) srsf6b (ENSDCDG00000029551) ift52 (ENSDCDG00000029580) mybl2b (ENSDCDG00000029618) rpn2 (ENSDCDG00000029644) ENSDCDG00000030476 CDK5RAP1 (ENSDCDG00000030478) #22 ENSDCDG00000030486 ENSDCDG00000030507 KCND3 (ENSDCDG00000030749) ngfb (ENSDCDG00000030750) uts2b (ENSDCDG00000030752) ENSDCDG00000030755 ENSDCDG00000030759 ENSDCDG00000030764 ENSDCDG00000030765 A3GALT2 (ENSDCDG00000030777) znf362a (ENSDCDG00000030781) trim62.1 (ENSDCDG00000030790) ENSDCDG00000030794 ENSDCDG00000030801 MMEL1 (ENSDCDG00000030881) Otophysi ANCESTRAL SPECIES 674 ENSGT00940000169850 ENSGT00940000160361 #22 Characiphysae ANCESTRAL SPECIES 100 ENSGT00940000155314.o ENSGT00940000161664 ENSGT00950000183053.C.a ENSGT00390000013253 ENSGT00940000154543.d ENSGT00940000161921.e.a ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT00940000155448.d ENSGT00940000155448.c.a ENSGT00390000011581 ENSGT00980000199174 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000160361 #22 ENSGT00940000169850 ENSGT00940000165667 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000155343.a.b Characiphysae_b ANCESTRAL SPECIES 110 ENSGT00940000155314.o ENSGT00940000161664 ENSGT00950000183053.C.a ENSGT00390000013253 ENSGT00940000154543.d ENSGT00940000161921.e.a ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT00940000155448.d ENSGT00940000155448.c.a ENSGT00390000011581 ENSGT00980000199174 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000155343.a.b Characoidei ANCESTRAL SPECIES 103 ENSGT00940000155314.p ENSGT00940000155314.o ENSGT00940000161664 ENSGT00950000183053.C.a ENSGT00390000013253 ENSGT00940000154543.d ENSGT00940000161921.e.a ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT00940000155448.c.a ENSGT00390000011581 ENSGT00980000199174 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000155343.a.b Mexicana tetra MODERN SPECIES 14 sh2d5 (ENSAMXG00000032349) hp1bp3 (ENSAMXG00000003203) znf831 (ENSAMXG00000044020) ENSAMXG00000032596 pdrg1 (ENSAMXG00000036912) PPP1R3D (ENSAMXG00000025801) ENSAMXG00000042566 phactr3b (ENSAMXG00000003153) acot8 (ENSAMXG00000003130) srsf6b (ENSAMXG00000042692) ift52 (ENSAMXG00000037656) ENSAMXG00000038451 mybl2b (ENSAMXG00000003090) rpn2 (ENSAMXG00000043167) ghrh (ENSAMXG00000003077) CDK5RAP1 (ENSAMXG00000003071) #22 ENSAMXG00000003037 ENSAMXG00000003001 KCND3 (ENSAMXG00000025413) INKA2 (ENSAMXG00000038891) rap1ab (ENSAMXG00000009071) PANK4 (ENSAMXG00000009007) draxina (ENSAMXG00000030551) ENSAMXG00000036527 agtrap (ENSAMXG00000008969) RNF207 (ENSAMXG00000041995) rpl22 (ENSAMXG00000030881) CHD5 (ENSAMXG00000008921) ARHGEF10L (ENSAMXG00000008760) ENSAMXG00000039491 ENSAMXG00000038443 Red-bellied piranha MODERN SPECIES 278 zgc:158258 (ENSPNAG00000002706) kif17 (ENSPNAG00000013334) znf831 (ENSPNAG00000007183) ENSPNAG00000013345 pdrg1 (ENSPNAG00000013357) ENSPNAG00000013372 PPP1R3D (ENSPNAG00000002724) phactr3b (ENSPNAG00000002731) acot8 (ENSPNAG00000013434) srsf6b (ENSPNAG00000013448) ENSPNAG00000013458 ift52 (ENSPNAG00000013481) mybl2b (ENSPNAG00000013504) rpn2 (ENSPNAG00000013579) ENSPNAG00000002838 CDK5RAP1 (ENSPNAG00000002871) #22 ENSPNAG00000002891 ENSPNAG00000013867 KCND3 (ENSPNAG00000013895) INKA2 (ENSPNAG00000013899) Euteleosteomorpha ANCESTRAL SPECIES 645 ENSGT00940000169850 ENSGT00940000160361 #22 Protacanthopterygii ANCESTRAL SPECIES 24 ENSGT00390000003768 ENSGT00940000157799 ENSGT00940000165161 ENSGT00950000182914.a.a.b ENSGT00940000153116.A ENSGT00390000005106 ENSGT00950000182824.a.a.b.b ENSGT00950000182937.B.a ENSGT00940000159288 ENSGT00940000155448.c.a ENSGT00940000153776.a.b.h.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00940000169850 ENSGT00940000160361 #22 ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000155198.B ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000162859.o ENSGT00940000158065 ENSGT00390000007605 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b Salmoninae ANCESTRAL SPECIES 1838 ENSGT00940000169850 ENSGT00940000160361 #22 Huchen MODERN SPECIES 3436 RASSF5 (ENSHHUG00000007343) ENSHHUG00000007338 SGK2 (ENSHHUG00000007206) ift52 (ENSHHUG00000007167) mybl2b (ENSHHUG00000007150) rpn2 (ENSHHUG00000007141) ENSHHUG00000007137 CDK5RAP1 (ENSHHUG00000007098) #22 ENSHHUG00000007054 ENSHHUG00000007045 ENSHHUG00000007040 ENSHHUG00000007033 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000160361 #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000160361 #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000160361 #22 Coho salmon MODERN SPECIES 25 trim62.1 (ENSOKIG00005036042) tnfrsf1b (ENSOKIG00005036057) ENSOKIG00005036076 MMEL1 (ENSOKIG00005036270) prxl2b (ENSOKIG00005040143) slc45a1 (ENSOKIG00005040176) zgc:101564 (ENSOKIG00005040206) ENSOKIG00005040242 RASSF5 (ENSOKIG00005040273) srsf6b (ENSOKIG00005040306) SGK2 (ENSOKIG00005040406) ift52 (ENSOKIG00005041691) mybl2b (ENSOKIG00005041793) RPN2 (ENSOKIG00005041906) ghrh (ENSOKIG00005043074) CDK5RAP1 (ENSOKIG00005043139) #22 ENSOKIG00005043724 ENSOKIG00005043778 ENSOKIG00005043794 ENSOKIG00005043800 ENSOKIG00005043808 ENSOKIG00005043822 EPB41L1 (ENSOKIG00005043871) cntn4 (ENSOKIG00005044284) ENSOKIG00005047391 ENSOKIG00005047528 ENSOKIG00005048581 ENSOKIG00005049593 pdzrn3b (ENSOKIG00005049640) ppp4r2b (ENSOKIG00005049651) gxylt2 (ENSOKIG00005049658) Salmo ANCESTRAL SPECIES 6 ENSGT00940000166932.f ENSGT00390000003768 ENSGT00940000157799.g ENSGT00940000165161 ENSGT00950000182914.a.a.b.c ENSGT00390000005106.m ENSGT00950000182824.a.a.b.b.f.a ENSGT00950000182937.B.a.j ENSGT00940000159288.h ENSGT00940000155448.c.a ENSGT00940000153776.a.b.h.b ENSGT00390000011581 ENSGT00940000156091.b.h ENSGT00390000002635.c ENSGT00950000183154.b.b ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a.q ENSGT00940000163346.a.i.b.b.a ENSGT00940000163346.a.i.b.b.b ENSGT00940000158442.k ENSGT00940000164786.a.g.a ENSGT00940000155198.B.g ENSGT00940000165371.a.e ENSGT00940000155198.A.e ENSGT00950000183062.a.a.a.a ENSGT00940000162859.o.e ENSGT00940000158065.e ENSGT00390000007605 ENSGT00390000013995.b.a.`b ENSGT00940000167138.b ENSGT00890000139436.A.a.a River trout MODERN SPECIES 7 trim62.1 (ENSSTUG00000048016) tnfrsf1b (ENSSTUG00000048004) ENSSTUG00000048000 ENSSTUG00000046771 prxl2b (ENSSTUG00000046690) slc45a1 (ENSSTUG00000046687) zgc:101564 (ENSSTUG00000046683) srgap2 (ENSSTUG00000046600) ENSSTUG00000046584 RASSF5 (ENSSTUG00000046560) SGK2 (ENSSTUG00000046248) ift52 (ENSSTUG00000046158) mybl2b (ENSSTUG00000046123) rpn2 (ENSSTUG00000045179) ghrh (ENSSTUG00000045087) CDK5RAP1 (ENSSTUG00000044820) #22 ENSSTUG00000044708 ENSSTUG00000044692 ENSSTUG00000044687 ENSSTUG00000044647 ENSSTUG00000044636 ENSSTUG00000044631 ENSSTUG00000043834 cntn4 (ENSSTUG00000038446) ENSSTUG00000036007 ENSSTUG00000035461 ENSSTUG00000035268 pdzrn3b (ENSSTUG00000035228) ppp4r2b (ENSSTUG00000035210) gxylt2 (ENSSTUG00000035198) shq1 (ENSSTUG00000035153) Atlantic salmon MODERN SPECIES 14 znf362a (ENSSSAG00000072808) trim62.1 (ENSSSAG00000093151) miip (ENSSSAG00000072834) ENSSSAG00000072855 fam213b (ENSSSAG00000074439) slc45a1 (ENSSSAG00000074441) srgap2 (ENSSSAG00000081064) ENSSSAG00000075785 RASSF5 (ENSSSAG00000075787) srsf6b (ENSSSAG00000109143) SGK2 (ENSSSAG00000075805) ift52 (ENSSSAG00000076674) ENSSSAG00000089596 mybl2b (ENSSSAG00000076703) ENSSSAG00000076745 cdk5rap1 (ENSSSAG00000077209) #22 bpifb2 (ENSSSAG00000077275) ENSSSAG00000072680 ENSSSAG00000071328 ENSSSAG00000111168 hes5 (ENSSSAG00000077365) ENSSSAG00000077358 ENSSSAG00000051104 cntn4 (ENSSSAG00000057173) ENSSSAG00000068685 ENSSSAG00000069369 ENSSSAG00000074668 pdzrn3b (ENSSSAG00000077728) ppp4r2b (ENSSSAG00000115308) gxylt2 (ENSSSAG00000077755) shq1 (ENSSSAG00000077767) Northern pike MODERN SPECIES 16 ENSELUG00000025598 ENSELUG00000023665 MMEL1 (ENSELUG00000023693) prxl2b (ENSELUG00000023723) slc45a1 (ENSELUG00000023807) odad1 (ENSELUG00000023843) zgc:101564 (ENSELUG00000023863) srgap2 (ENSELUG00000023961) ikbke (ENSELUG00000024040) RASSF5 (ENSELUG00000030511) srsf6b (ENSELUG00000024182) ift52 (ENSELUG00000024208) mybl2b (ENSELUG00000024212) rpn2 (ENSELUG00000024314) ENSELUG00000001539 CDK5RAP1 (ENSELUG00000024526) #22 ENSELUG00000024557 ENSELUG00000002887 ENSELUG00000002906 EPB41L1 (ENSELUG00000003026) cntn4 (ENSELUG00000003143) CNTN4 (ENSELUG00000003279) ENSELUG00000003353 ENSELUG00000003398 ENSELUG00000025303 ENSELUG00000003407 ENSELUG00000032197 pdzrn3b (ENSELUG00000003425) ppp4r2b (ENSELUG00000003437) gxylt2 (ENSELUG00000003451) shq1 (ENSELUG00000003476) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000160361 #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000160361 #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000160361 #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000160361 #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000160361 #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000160361 #22 Cichlidae ANCESTRAL SPECIES ENSGT00940000160361 #22 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000158061.b ENSGT00950000182882.A.a.i.a ENSGT00940000159178 ENSGT00940000161154.a ENSGT00950000183042.b.b ENSGT00940000161921.e.a ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT00940000155448.c.a ENSGT00390000011581 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000165667 ENSGT01100000263545.a.b.c.a.l ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a.k ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000167414 ENSGT00940000155198.B ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000162859.o ENSGT00940000158065 ENSGT00390000007605 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 17 svbp (ENSONIG00000028102) fbxo2 (ENSONIG00000020238) ITGA5 (ENSONIG00000020239) ENSONIG00000021067 txnrd3 (ENSONIG00000020241) CHST13 (ENSONIG00000020242) SLC41A3 (ENSONIG00000020243) PPP1R3D (ENSONIG00000031757) phactr3b (ENSONIG00000020245) ENSONIG00000030411 acot8 (ENSONIG00000020247) ift52 (ENSONIG00000020248) mybl2b (ENSONIG00000020250) rpn2 (ENSONIG00000020251) ENSONIG00000020252 CDK5RAP1 (ENSONIG00000020253) #22 ENSONIG00000020254 ENSONIG00000020256 ENSONIG00000033511 cntn4 (ENSONIG00000020257) ENSONIG00000020258 ENSONIG00000020259 ENSONIG00000020260 pdzrn3b (ENSONIG00000020261) ppp4r2 (ENSONIG00000031128) gxylt2 (ENSONIG00000020263) shq1 (ENSONIG00000020264) ENSONIG00000030779 rybpa (ENSONIG00000020265) prok2 (ENSONIG00000030565) gpr27 (ENSONIG00000040990) Nile tilapia MODERN SPECIES 17 ENSONIG00000020259 ENSONIG00000020260 pdzrn3b (ENSONIG00000020261) ppp4r2 (ENSONIG00000031128) gxylt2 (ENSONIG00000020263) shq1 (ENSONIG00000020264) ENSONIG00000030779 rybpa (ENSONIG00000020265) prok2 (ENSONIG00000030565) gpr27 (ENSONIG00000040990) EIF4E3 (ENSONIG00000020266) foxp1b (ENSONIG00000020267) mdfic2 (ENSONIG00000035668) zgc:113054 (ENSONIG00000020268) ddx4 (ENSONIG00000030953) ENSONIG00000041875 #22 mitfa (ENSONIG00000020270) FRMD4B (ENSONIG00000020271) arl6ip5a (ENSONIG00000029243) trnt1 (ENSONIG00000020273) ENSONIG00000020274 lrrn1 (ENSONIG00000020810) setmar (ENSONIG00000020275) ITPR1 (ENSONIG00000020276) bhlhe40 (ENSONIG00000020277) NAAA (ENSONIG00000020278) arl8bb (ENSONIG00000020279) ENSONIG00000028560 SEMA3F (ENSONIG00000020280) camkvb (ENSONIG00000036268) ENSONIG00000020282 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000160361 #22 Haplochromini ANCESTRAL SPECIES ENSGT00940000160361 #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000160361 #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00390000006113 ENSGT00940000160929 ENSGT00940000158061.b ENSGT00950000182882.A.a.i.a ENSGT00940000159178 ENSGT00940000161154.a ENSGT00950000183042.b.b ENSGT00940000161921.e.a ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT00940000155448.c.a ENSGT00390000011581 ENSGT00940000156091.b ENSGT00390000002635 ENSGT00950000183154.b.b ENSGT00940000160361 #22 ENSGT00940000165667 ENSGT01100000263545.a.b.c.a.l ENSGT00940000175704 ENSGT01100000263545.a.b.c.a.k ENSGT00940000158442 ENSGT00940000164786.a ENSGT00940000167414 ENSGT00940000155198.B ENSGT00940000165371.a ENSGT00940000155198.A ENSGT00950000183062.a.a.a ENSGT00940000162859.o ENSGT00940000158065 ENSGT00390000007605 ENSGT00390000013995.b.a Eastern happy MODERN SPECIES 17 svbp (ENSACLG00000024715) fbxo2 (ENSACLG00000024705) ITGA5 (ENSACLG00000024659) bin2b (ENSACLG00000024591) txnrd3 (ENSACLG00000024528) CHST13 (ENSACLG00000024517) SLC41A3 (ENSACLG00000024479) PPP1R3D (ENSACLG00000024470) phactr3b (ENSACLG00000024422) acot8 (ENSACLG00000024394) ENSACLG00000024373 ift52 (ENSACLG00000024353) mybl2b (ENSACLG00000024029) rpn2 (ENSACLG00000023886) ghrh (ENSACLG00000023847) ENSACLG00000023836 #22 cdk5rap1 (ENSACLG00000023797) ENSACLG00000023768 ENSACLG00000023732 ENSACLG00000023622 ENSACLG00000023605 cntn4 (ENSACLG00000023580) ENSACLG00000023449 ENSACLG00000023351 ENSACLG00000023336 ENSACLG00000023317 pdzrn3b (ENSACLG00000023265) ppp4r2b (ENSACLG00000023118) gxylt2 (ENSACLG00000023097) shq1 (ENSACLG00000023077) rybpa (ENSACLG00000023062) Zebra mbuna MODERN SPECIES 1108 cdc42 (ENSMZEG00005007846) wnt4 (ENSMZEG00005007869) svbp (ENSMZEG00005007878) fbxo2 (ENSMZEG00005007887) ITGA5 (ENSMZEG00005007903) bin2b (ENSMZEG00005007927) txnrd3 (ENSMZEG00005007952) CHST13 (ENSMZEG00005007976) phactr3b (ENSMZEG00005007995) acot8 (ENSMZEG00005008019) srsf6b (ENSMZEG00005008032) ift52 (ENSMZEG00005008048) mybl2b (ENSMZEG00005008082) rpn2 (ENSMZEG00005008098) ENSMZEG00005008130 ENSMZEG00005008141 #22 ENSMZEG00005008163 ENSMZEG00005008183 ENSMZEG00005008203 ENSMZEG00005008262 cntn4 (ENSMZEG00005008333) ENSMZEG00005008380 ENSMZEG00005008392 ENSMZEG00005008437 ENSMZEG00005008531 pdzrn3b (ENSMZEG00005008554) ppp4r2b (ENSMZEG00005008591) gxylt2 (ENSMZEG00005008602) shq1 (ENSMZEG00005008649) rybpa (ENSMZEG00005008698) prok2 (ENSMZEG00005008722) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000160361 #22 Eupercaria ANCESTRAL SPECIES ENSGT00940000160361 #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000160361 #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000160361 #22 Perciformes ANCESTRAL SPECIES ENSGT00940000160361 #22 Cottioidei ANCESTRAL SPECIES ENSGT00940000160361 #22 Stickleback MODERN SPECIES 17 ENSGACG00000010913 ENSGACG00000010910 ENSGACG00000010909 wnt4 (ENSGACG00000010904) svbp (ENSGACG00000010900) ITGA5 (ENSGACG00000010880) bin2b (ENSGACG00000010864) txnrd3 (ENSGACG00000010836) CHST13 (ENSGACG00000010830) ENSGACG00000010825 phactr3b (ENSGACG00000010815) acot8 (ENSGACG00000010803) ift52 (ENSGACG00000010767) mybl2b (ENSGACG00000010763) rpn2 (ENSGACG00000010733) CDK5RAP1 (ENSGACG00000010721) #22 ENSGACG00000010643 sema3fa (ENSGACG00000010605) ENSGACG00000010600 ENSGACG00000010591 CAMKV (ENSGACG00000010570) ENSGACG00000010551 ENSGACG00000010539 inka1b (ENSGACG00000010537) gnai2b (ENSGACG00000010512) SLC38A3 (ENSGACG00000010478) rbm5 (ENSGACG00000010469) BRK1 (ENSGACG00000010458) ENSGACG00000010455 TEX264 (ENSGACG00000010452) grm2b (ENSGACG00000010427) Osteoglossiformes ANCESTRAL SPECIES 28 ENSGT00940000158523.c.a ENSGT00940000162955 ENSGT00940000164549.a.a ENSGT00940000160218.e ENSGT00950000183053.C.a.c ENSGT00940000159879 ENSGT00940000154543.c ENSGT00940000157562.q.b ENSGT00390000018558 ENSGT00940000165527 ENSGT00530000063759.b ENSGT00940000155448.c.b ENSGT00940000159708 ENSGT00940000153776.a.b ENSGT00940000156091.a ENSGT00940000160361 #22 ENSGT01100000263545.a.b.c.a ENSGT00940000158442 ENSGT00940000164786.b ENSGT00940000165371.b ENSGT00940000155198.A.b ENSGT00940000162859.p ENSGT00390000013995.b.a.a ENSGT00940000155865.c.a ENSGT00940000165920.a ENSGT00940000156326.b ENSGT00940000159731 ENSGT00390000008631.a.o.b ENSGT00550000074831.l ENSGT00940000155644.b ENSGT00940000162607.a Asian bonytongue MODERN SPECIES 14 cstf1 (ENSSFOG00015015004) ENSSFOG00015015030 ENSSFOG00015026985 pdrg1 (ENSSFOG00015015047) ENSSFOG00015028580 PPP1R3D (ENSSFOG00015032356) phactr3b (ENSSFOG00015015097) wfdc2 (ENSSFOG00015015123) acot8 (ENSSFOG00015015145) ENSSFOG00015033088 srsf6b (ENSSFOG00015015169) ift52 (ENSSFOG00015015219) mybl2b (ENSSFOG00015015284) rpn2 (ENSSFOG00015015349) ENSSFOG00015015437 CDK5RAP1 (ENSSFOG00015015455) #22 ENSSFOG00015015502 EPB41L1 (ENSSFOG00015015609) cntn4 (ENSSFOG00015015791) ENSSFOG00015015845 ENSSFOG00015015929 ENSSFOG00015016050 pdzrn3b (ENSSFOG00015016102) ENSSFOG00015029341 ppp4r2b (ENSSFOG00015016134) gxylt2 (ENSSFOG00015016186) shq1 (ENSSFOG00015016241) RYBP (ENSSFOG00015025952) prok2 (ENSSFOG00015016263) gpr27 (ENSSFOG00015030628) EIF4E3 (ENSSFOG00015016279) Spotted gar MODERN SPECIES 656 tgm2b (ENSLOCG00000001167) ENSLOCG00000001193 DLGAP4 (ENSLOCG00000001238) ENSLOCG00000001261 myl9a (ENSLOCG00000001277) LPIN3 (ENSLOCG00000001295) mybl2b (ENSLOCG00000001337) ENSLOCG00000001358 ift52 (ENSLOCG00000001372) sgk2a (ENSLOCG00000001397) L3MBTL1 (ENSLOCG00000001414) ENSLOCG00000001442 EPB41L1 (ENSLOCG00000001454) rpn2 (ENSLOCG00000001480) ENSLOCG00000001496 CDK5RAP1 (ENSLOCG00000001505) #22 ENSLOCG00000001534 PREX1 (ENSLOCG00000001552) kcnq2a (ENSLOCG00000001599) chrna4b (ENSLOCG00000001635) zgpat (ENSLOCG00000001659) arfrp1 (ENSLOCG00000001677) TNFRSF6B (ENSLOCG00000001688) rtel1 (ENSLOCG00000001700) STMN3 (ENSLOCG00000001717) GMEB2 (ENSLOCG00000001741) HELZ2 (ENSLOCG00000001770) ccn5 (ENSLOCG00000001790) ENSLOCG00000018356 FNDC11 (ENSLOCG00000001805) stk35 (ENSLOCG00000001817) Reedfish MODERN SPECIES 1 rprd1b (ENSECRG00000012316) DLGAP4 (ENSECRG00000012358) ENSECRG00000012389 myl9a (ENSECRG00000012401) ENSECRG00000012414 ENSECRG00000012430 mybl2b (ENSECRG00000012440) ift52 (ENSECRG00000012465) sgk2a (ENSECRG00000012498) ENSECRG00000012517 ENSECRG00000012528 srsf6a (ENSECRG00000012559) ENSECRG00000012638 rpn2 (ENSECRG00000012737) ENSECRG00000012777 CDK5RAP1 (ENSECRG00000012816) #22 ENSECRG00000012887 ENSECRG00000012980 tpx2 (ENSECRG00000013027) bcl2l1 (ENSECRG00000013046) ENSECRG00000013061 bcl2l1 (ENSECRG00000013072) cox4i2 (ENSECRG00000013086) FAM110A (ENSECRG00000013098) nsfl1c (ENSECRG00000013122) mfsd2al2 (ENSECRG00000013140) ENSECRG00000013163 ENSECRG00000013183 SNPH (ENSECRG00000013200) ENSECRG00000013226 NTSR1 (ENSECRG00000013239)