Murinae	ANCESTRAL SPECIES	1	ENSGT00940000161566 #8	ENSGT00940000162210 #9	ENSGT00940000160611.i #10	ENSGT00940000160611.j #11	ENSGT00940000155740 #12	ENSGT00390000005315 #13	ENSGT01100000263775	ENSGT00940000154468 #14	ENSGT00940000156477 #15	ENSGT00940000163024 #16	ENSGT00390000003964.b #17	ENSGT00940000158442 #18	ENSGT00390000007796 #19	ENSGT00940000155308 #20	ENSGT00940000155458 #21	ENSGT00940000159849 #22	ENSGT00390000004786 #23	ENSGT00940000160331 #24	ENSGT00950000182872.f.a.a.b.x.a #25	ENSGT00390000011347 #26	ENSGT00950000182982.B #27	ENSGT00940000161648 #28	ENSGT00390000013867 #29	ENSGT00950000183202.a.a #30	ENSGT00940000160596 #31	ENSGT00390000002635 #32	ENSGT00950000183154.b.b #33	ENSGT00390000003422 #34	ENSGT00940000158250 #35	ENSGT00390000014105 #36	ENSGT00940000166501 #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000160586 #7	ENSGT00940000161566 #8	ENSGT00940000162210 #9	ENSGT00940000160611.i #10	ENSGT00940000160611.j #11	ENSGT00940000155740 #12	ENSGT00390000005315 #13	ENSGT00940000154468 #14	ENSGT00940000156477 #15	ENSGT00940000163024 #16	ENSGT00390000003964.b #17	ENSGT00940000158442 #18	ENSGT00390000007796 #19	ENSGT00940000155308 #20	ENSGT00940000155458 #21	ENSGT00940000159849 #22	ENSGT00390000004786 #23	ENSGT00940000160331 #24	ENSGT00950000182872.f.a.a.b.x.a #25	ENSGT00390000011347 #26	ENSGT00950000182982.B #27	ENSGT00940000161648 #28	ENSGT00390000013867 #29	ENSGT00950000183202.a.a #30	ENSGT00940000160596 #31	ENSGT00390000002635 #32	ENSGT00950000183154.b.b #33	ENSGT00390000003422 #34	ENSGT00940000158250 #35	ENSGT00390000014105 #36	ENSGT00940000166501 #37
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0025992 #7	Spag4 (MGP_PahariEiJ_G0025993) #8	MGP_PahariEiJ_G0025994 #9	MGP_PahariEiJ_G0025995 #10	MGP_PahariEiJ_G0025996 #11	Nfs1 (MGP_PahariEiJ_G0025997) #12	Romo1 (MGP_PahariEiJ_G0025998) #13	Rbm39 (MGP_PahariEiJ_G0025999) #14	Phf20 (MGP_PahariEiJ_G0026000) #15	Scand1 (MGP_PahariEiJ_G0026001) #16	Cnbd2 (MGP_PahariEiJ_G0026002) #17	MGP_PahariEiJ_G0026003 #18	Aar2 (MGP_PahariEiJ_G0026004) #19	Dlgap4 (MGP_PahariEiJ_G0026005) #20	Myl9 (MGP_PahariEiJ_G0026006) #21	Tgif2 (MGP_PahariEiJ_G0026007) #22	Rab5if (MGP_PahariEiJ_G0026008) #23	Sla2 (MGP_PahariEiJ_G0026009) #24	Ndrg3 (MGP_PahariEiJ_G0026010) #25	Dsn1 (MGP_PahariEiJ_G0026011) #26	Soga1 (MGP_PahariEiJ_G0026012) #27	Tldc2 (MGP_PahariEiJ_G0026013) #28	Samhd1 (MGP_PahariEiJ_G0026014) #29	Rbl1 (MGP_PahariEiJ_G0026015) #30	Mroh8 (MGP_PahariEiJ_G0026016) #31	MGP_PahariEiJ_G0026017 #32	Ghrh (MGP_PahariEiJ_G0026018) #33	Manbal (MGP_PahariEiJ_G0026019) #34	Src (MGP_PahariEiJ_G0026020) #35	Blcap (MGP_PahariEiJ_G0026021) #36	Nnat (MGP_PahariEiJ_G0026022) #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000160586 #7	ENSGT00940000161566 #8	ENSGT00940000162210 #9	ENSGT00940000160611.i #10	ENSGT00940000160611.j #11	ENSGT00940000155740 #12	ENSGT00390000005315 #13	ENSGT00940000154468.u #14	ENSGT00940000156477 #15	ENSGT00940000163024 #16	ENSGT00390000003964.b #17	ENSGT00940000158442 #18	ENSGT00390000007796 #19	ENSGT00940000155308 #20	ENSGT00940000155458 #21	ENSGT00940000159849 #22	ENSGT00390000004786 #23	ENSGT00940000160331 #24	ENSGT00950000182872.f.a.a.b.x.a #25	ENSGT00390000011347 #26	ENSGT00950000182982.B #27	ENSGT00940000161648 #28	ENSGT00390000013867 #29	ENSGT00950000183202.a.a #30	ENSGT00940000160596 #31	ENSGT00390000002635 #32	ENSGT00950000183154.b.b #33	ENSGT00390000003422 #34	ENSGT00940000158250 #35	ENSGT00390000014105 #36	ENSGT00940000166501 #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000160586 #7	ENSGT00940000161566 #8	ENSGT00940000162210 #9	ENSGT00940000160611.i #10	ENSGT00940000160611.j #11	ENSGT00940000155740 #12	ENSGT00390000005315 #13	ENSGT00940000154468.u #14	ENSGT00940000156477 #15	ENSGT00940000163024 #16	ENSGT00390000003964.b #17	ENSGT00940000158442 #18	ENSGT00390000007796 #19	ENSGT00940000155308 #20	ENSGT00940000155458 #21	ENSGT00940000159849 #22	ENSGT00390000004786 #23	ENSGT00940000160331 #24	ENSGT00950000182872.f.a.a.b.x.a #25	ENSGT00390000011347 #26	ENSGT00950000182982.B #27	ENSGT00940000161648 #28	ENSGT00390000013867 #29	ENSGT00950000183202.a.a #30	ENSGT00940000160596 #31	ENSGT00390000002635 #32	ENSGT00950000183154.b.b #33	ENSGT00390000003422 #34	ENSGT00940000158250 #35	ENSGT00390000014105 #36	ENSGT00940000166501 #37
Mouse	MODERN SPECIES	11	Fer1l4 (ENSMUSG00000013338) #7	Spag4 (ENSMUSG00000038180) #8	Cpne1 (ENSMUSG00000074643)	Gm28036 (ENSMUSG00000098950)	Rbm12 (ENSMUSG00000089824)	Nfs1 (ENSMUSG00000027618) #12	Romo1 (ENSMUSG00000067847) #13	Rbm39 (ENSMUSG00000027620) #14	Phf20 (ENSMUSG00000038116) #15	Scand1 (ENSMUSG00000046229) #16	Cnbd2 (ENSMUSG00000038085) #17	Epb41l1 (ENSMUSG00000027624) #18	Aar2 (ENSMUSG00000027628) #19	Dlgap4 (ENSMUSG00000061689) #20	Myl9 (ENSMUSG00000067818) #21	Tgif2 (ENSMUSG00000062175) #22	Rab5if (ENSMUSG00000027637) #23	Sla2 (ENSMUSG00000027636) #24	Ndrg3 (ENSMUSG00000027634) #25	Dsn1 (ENSMUSG00000027635) #26	Soga1 (ENSMUSG00000055485) #27	Tldc2 (ENSMUSG00000074628) #28	Samhd1 (ENSMUSG00000027639) #29	Rbl1 (ENSMUSG00000027641) #30	Mroh8 (ENSMUSG00000074627) #31	Rpn2 (ENSMUSG00000027642) #32	Ghrh (ENSMUSG00000027643) #33	Manbal (ENSMUSG00000063019) #34	Src (ENSMUSG00000027646) #35	Blcap (ENSMUSG00000067787) #36	Nnat (ENSMUSG00000067786) #37
Mus_C	ANCESTRAL SPECIES		ENSGT00940000160586 #7	ENSGT00940000161566 #8	ENSGT00940000162210 #9	ENSGT00940000160611.i #10	ENSGT00940000160611.j #11	ENSGT00940000155740 #12	ENSGT00390000005315 #13	ENSGT00940000154468.u #14	ENSGT00940000156477 #15	ENSGT00940000163024 #16	ENSGT00390000003964.b #17	ENSGT00940000158442 #18	ENSGT00390000007796 #19	ENSGT00940000155308 #20	ENSGT00940000155458 #21	ENSGT00940000159849 #22	ENSGT00390000004786 #23	ENSGT00940000160331 #24	ENSGT00950000182872.f.a.a.b.x.a #25	ENSGT00390000011347 #26	ENSGT00950000182982.B #27	ENSGT00940000161648 #28	ENSGT00390000013867 #29	ENSGT00950000183202.a.a #30	ENSGT00940000160596 #31	ENSGT00390000002635 #32	ENSGT00950000183154.b.b #33	ENSGT00390000003422 #34	ENSGT00940000158250 #35	ENSGT00390000014105 #36	ENSGT00940000166501 #37
Steppe mouse	MODERN SPECIES	27	ENSMSIG00000004488 #9	Nfs1 (ENSMSIG00000004570) #12	Romo1 (ENSMSIG00000004626) #13	Rbm39 (ENSMSIG00000004662) #14	Phf20 (ENSMSIG00000004775) #15	Scand1 (ENSMSIG00000004809) #16	Cnbd2 (ENSMSIG00000004822) #17	ENSMSIG00000004935	Epb41l1 (ENSMSIG00000004982) #18	ENSMSIG00000005381	ENSMSIG00000005397	Aar2 (ENSMSIG00000005403) #19	Dlgap4 (ENSMSIG00000005429) #20	Myl9 (ENSMSIG00000005842) #21	ENSMSIG00000005860	Tgif2 (ENSMSIG00000005866) #22	Rab5if (ENSMSIG00000005901) #23	Sla2 (ENSMSIG00000005922) #24	ENSMSIG00000005964 ##25
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0025469 #7	Spag4 (MGP_SPRETEiJ_G0025470) #8	MGP_SPRETEiJ_G0025471 #9	MGP_SPRETEiJ_G0025472 #10	MGP_SPRETEiJ_G0025473 #11	Nfs1 (MGP_SPRETEiJ_G0025474) #12	Romo1 (MGP_SPRETEiJ_G0025475) #13	Rbm39 (MGP_SPRETEiJ_G0025476) #14	Phf20 (MGP_SPRETEiJ_G0025477) #15	Scand1 (MGP_SPRETEiJ_G0025478) #16	Cnbd2 (MGP_SPRETEiJ_G0025479) #17	MGP_SPRETEiJ_G0025480 #18	Aar2 (MGP_SPRETEiJ_G0025481) #19	Dlgap4 (MGP_SPRETEiJ_G0025482) #20	Myl9 (MGP_SPRETEiJ_G0025483) #21	Tgif2 (MGP_SPRETEiJ_G0025484) #22	MGP_SPRETEiJ_G0025485	Rab5if (MGP_SPRETEiJ_G0025486) #23	Sla2 (MGP_SPRETEiJ_G0025487) #24	Ndrg3 (MGP_SPRETEiJ_G0025488) #25	Dsn1 (MGP_SPRETEiJ_G0025489) #26	Soga1 (MGP_SPRETEiJ_G0025490) #27	Tldc2 (MGP_SPRETEiJ_G0025491) #28	Samhd1 (MGP_SPRETEiJ_G0025492) #29	Rbl1 (MGP_SPRETEiJ_G0025493) #30	Mroh8 (MGP_SPRETEiJ_G0025494) #31	Rpn2 (MGP_SPRETEiJ_G0025495) #32	Ghrh (MGP_SPRETEiJ_G0025496) #33	Manbal (MGP_SPRETEiJ_G0025497) #34	Src (MGP_SPRETEiJ_G0025498) #35	Blcap (MGP_SPRETEiJ_G0025499) #36
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0024547 #7	Spag4 (MGP_CAROLIEiJ_G0024548) #8	MGP_CAROLIEiJ_G0024549 #9	MGP_CAROLIEiJ_G0024550 #10	MGP_CAROLIEiJ_G0024551 #11	Nfs1 (MGP_CAROLIEiJ_G0024552) #12	Romo1 (MGP_CAROLIEiJ_G0024553) #13	Rbm39 (MGP_CAROLIEiJ_G0024554) #14	Phf20 (MGP_CAROLIEiJ_G0024555) #15	Scand1 (MGP_CAROLIEiJ_G0024556) #16	Cnbd2 (MGP_CAROLIEiJ_G0024557) #17	Epb41l1 (MGP_CAROLIEiJ_G0024558) #18	Aar2 (MGP_CAROLIEiJ_G0024559) #19	Dlgap4 (MGP_CAROLIEiJ_G0024560) #20	Myl9 (MGP_CAROLIEiJ_G0024561) #21	Tgif2 (MGP_CAROLIEiJ_G0024562) #22	MGP_CAROLIEiJ_G0024563	Rab5if (MGP_CAROLIEiJ_G0024564) #23	Sla2 (MGP_CAROLIEiJ_G0024565) #24	Ndrg3 (MGP_CAROLIEiJ_G0024566) #25	Dsn1 (MGP_CAROLIEiJ_G0024567) #26	Soga1 (MGP_CAROLIEiJ_G0024568) #27	Tldc2 (MGP_CAROLIEiJ_G0024569) #28	Samhd1 (MGP_CAROLIEiJ_G0024570) #29	Rbl1 (MGP_CAROLIEiJ_G0024571) #30	Mroh8 (MGP_CAROLIEiJ_G0024572) #31	Rpn2 (MGP_CAROLIEiJ_G0024573) #32	Ghrh (MGP_CAROLIEiJ_G0024574) #33	Manbal (MGP_CAROLIEiJ_G0024575) #34	Src (MGP_CAROLIEiJ_G0024576) #35	Blcap (MGP_CAROLIEiJ_G0024577) #36
Rat	DUPLICATION
Rat	MODERN SPECIES	13	Fer1l4 (ENSRNOG00000019467) #7	Spag4 (ENSRNOG00000048056) #8	Rbm12 (ENSRNOG00000069087) #9	Cpne1 (ENSRNOG00000019723) #11	Nfs1 (ENSRNOG00000045686) #12	Romo1 (ENSRNOG00000045555) #13	ENSRNOG00000068949	Rbm39 (ENSRNOG00000019848) #14	Phf20 (ENSRNOG00000019948) #15	Scand1 (ENSRNOG00000019987) #16	Cnbd2 (ENSRNOG00000019992) #17	Epb41l1 (ENSRNOG00000057817) #18	Aar2 (ENSRNOG00000020086) #19	Dlgap4 (ENSRNOG00000020225) #20	Myl9 (ENSRNOG00000020246) #21	Tgif2 (ENSRNOG00000042374) #22	Rab5if (ENSRNOG00000020317) #23	Sla2 (ENSRNOG00000020337) #24	LOC120101769 (ENSRNOG00000067832) #25	LOC102554288 (ENSRNOG00000064950) #25	LOC679863 (ENSRNOG00000036813) #25	Dsn1 (ENSRNOG00000006236) #26	ENSRNOG00000063901	Soga1 (ENSRNOG00000053240) #27	Tldc2 (ENSRNOG00000006395) #28	Samhd1 (ENSRNOG00000006418) #29	Rbl1 (ENSRNOG00000006921) #30	Mroh8 (ENSRNOG00000007341) #31	Rpn2 (ENSRNOG00000007492) #32	Ghrh (ENSRNOG00000007782) #33	Manbal (ENSRNOG00000031453) #34
Rat	MODERN SPECIES	8	ENSRNOG00000065006	Elmo1 (ENSRNOG00000059705)	Gpr141 (ENSRNOG00000066332)	Sfrp4 (ENSRNOG00000054957)	Nme8 (ENSRNOG00000058285)	Epdr1 (ENSRNOG00000060141)	LOC498759 (ENSRNOG00000050687)	Stard3nl (ENSRNOG00000052429)	ENSRNOG00000063508	ENSRNOG00000066100	AABR07027872.1 (ENSRNOG00000055197)	ENSRNOG00000070051	LOC100910792 (ENSRNOG00000059510)	Vps41 (ENSRNOG00000012940)	Pou6f2 (ENSRNOG00000013237)	AABR07027925.2 (ENSRNOG00000030925) #22	Yae1 (ENSRNOG00000013438)	Rala (ENSRNOG00000013454)	Cdk13 (ENSRNOG00000013620)	Mplkip (ENSRNOG00000013806)	Sugct (ENSRNOG00000066247)	Inhba (ENSRNOG00000014320)	Gli3 (ENSRNOG00000014395)	Psme1-ps1 (ENSRNOG00000061359)	Gabpb1l (ENSRNOG00000053439)	RGD1308147 (ENSRNOG00000015523)	Psma2 (ENSRNOG00000049920)	Mrpl32 (ENSRNOG00000015989)	Hecw1 (ENSRNOG00000016046)	Rbbp4-ps2 (ENSRNOG00000021292)	ENSRNOG00000064563