Mus	ANCESTRAL SPECIES	5	ENSGT00940000162622 #7	ENSGT00390000014633 #8	ENSGT00940000155451 #9	ENSGT00390000010993 #10	ENSGT00950000182900.D.d.a #11	ENSGT00390000000230 #12	ENSGT00390000019377.a #13	ENSGT00940000162378 #14	ENSGT00940000159936 #16	ENSGT00940000161314 #15	ENSGT01080000257365.b.a.b.b #17	ENSGT00990000203615.b.a.a.a.a #18	ENSGT00390000017728 #19	ENSGT01030000234540.B.a.a.a.b.a.b #20	ENSGT00940000160444 #21	ENSGT00940000158886 #22	ENSGT00730000111174 #23	ENSGT00940000161712 #24	ENSGT01030000234540.C #25	ENSGT01050000244808.D.gb #26	ENSGT00940000161329 #27	ENSGT01100000263515.a.b.a.b.b.h.b #28	ENSGT01100000263515.a.b.a.b.b.h.a.b #29	ENSGT00940000159272.B #30	ENSGT00940000163654.d #31	ENSGT00940000163654.c #32	ENSGT00940000162870.c #33	ENSGT00940000162870.d #34	ENSGT01050000244808.A.b.a.b #35	ENSGT00940000159272.A #36	ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##29
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000162622 #7	ENSGT00390000014633 #8	ENSGT00940000155451 #9	ENSGT00390000010993 #10	ENSGT00950000182900.D.d.a #11	ENSGT00390000000230 #12	ENSGT00390000019377.a #13	ENSGT00940000162378 #14	ENSGT00940000159936 #16	ENSGT00940000161314 #15	ENSGT01080000257365.b.a.b.b #17	ENSGT00990000203615.b.a.a.a.a #18	ENSGT00390000017728 #19	ENSGT01030000234540.B.a.a.a.b.a.b #20	ENSGT00940000160444 #21	ENSGT00940000158886 #22	ENSGT00730000111174 #23	ENSGT00940000161712 #24	ENSGT01030000234540.C #25	ENSGT01050000244808.D.gb #26	ENSGT00940000161329 #27	ENSGT01100000263515.a.b.a.b.b.h.b #28	ENSGT01100000263515.a.b.a.b.b.h.a.b #29	ENSGT00940000159272.B #30	ENSGT00940000163654.d #31	ENSGT00940000163654.c #32	ENSGT00940000162870.c #33	ENSGT00940000162870.d #34	ENSGT01050000244808.A.b.a.b #35	ENSGT00940000159272.A #36	ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##29
Ryukyu mouse	MODERN SPECIES		Nhlh1 (MGP_CAROLIEiJ_G0014883) #7	Ncstn (MGP_CAROLIEiJ_G0014884) #8	Copa (MGP_CAROLIEiJ_G0014885) #9	Pex19 (MGP_CAROLIEiJ_G0014886) #10	Dcaf8 (MGP_CAROLIEiJ_G0014887) #11	Pea15a (MGP_CAROLIEiJ_G0014888) #12	Casq1 (MGP_CAROLIEiJ_G0014889) #13	Atp1a4 (MGP_CAROLIEiJ_G0014890) #14	Igsf8 (MGP_CAROLIEiJ_G0014891) #15	Atp1a2 (MGP_CAROLIEiJ_G0014892) #16	Kcnj9 (MGP_CAROLIEiJ_G0014893) #17	Kcnj10 (MGP_CAROLIEiJ_G0014894) #18	Pigm (MGP_CAROLIEiJ_G0014895) #19	MGP_CAROLIEiJ_G0014896 #20	Igsf9 (MGP_CAROLIEiJ_G0014897) #21	Tagln2 (MGP_CAROLIEiJ_G0014898) #22	Cfap45 (MGP_CAROLIEiJ_G0014899) #23	Vsig8 (MGP_CAROLIEiJ_G0014900) #24	Slamf8 (MGP_CAROLIEiJ_G0014901) #25	Fcrl6 (MGP_CAROLIEiJ_G0014902) #26	Dusp23 (MGP_CAROLIEiJ_G0014903) #27	Crp (MGP_CAROLIEiJ_G0014904) #28	Apcs (MGP_CAROLIEiJ_G0014905) #29	Or10j5 (MGP_CAROLIEiJ_G0014906) #30	Or10j27 (MGP_CAROLIEiJ_G0014907) #31	Or10j7 (MGP_CAROLIEiJ_G0014908) #32	Or10j3 (MGP_CAROLIEiJ_G0014909) #33	Or10j3b (MGP_CAROLIEiJ_G0014910) #34	Fcer1a (MGP_CAROLIEiJ_G0014911) #35	Or10j2 (MGP_CAROLIEiJ_G0014912) #36	Ackr1 (MGP_CAROLIEiJ_G0014913) #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000162622 #7	ENSGT00390000014633 #8	ENSGT00940000155451 #9	ENSGT00390000010993 #10	ENSGT00950000182900.D.d.a #11	ENSGT00390000000230 #12	ENSGT00390000019377.a #13	ENSGT00940000162378 #14	ENSGT00940000159936 #16	ENSGT00940000161314 #15	ENSGT01080000257365.b.a.b.b #17	ENSGT00990000203615.b.a.a.a.a #18	ENSGT00390000017728 #19	ENSGT01030000234540.B.a.a.a.b.a.b #20	ENSGT00940000160444 #21	ENSGT00940000158886 #22	ENSGT00730000111174 #23	ENSGT00940000161712 #24	ENSGT01030000234540.C #25	ENSGT01050000244808.D.gb #26	ENSGT00940000161329 #27	ENSGT01100000263515.a.b.a.b.b.h.b #28	ENSGT01100000263515.a.b.a.b.b.h.a.b #29	ENSGT00940000159272.B #30	ENSGT00940000163654.d #31	ENSGT00940000163654.c #32	ENSGT00940000162870.c #33	ENSGT00940000162870.d #34	ENSGT01050000244808.A.b.a.b #35	ENSGT00940000159272.A #36	ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##29
Mouse	MODERN SPECIES		Nhlh1 (ENSMUSG00000051251) #7	Ncstn (ENSMUSG00000003458) #8	Copa (ENSMUSG00000026553) #9	Pex19 (ENSMUSG00000003464) #10	Dcaf8 (ENSMUSG00000026554) #11	Pea15a (ENSMUSG00000013698) #12	Casq1 (ENSMUSG00000007122) #13	Atp1a4 (ENSMUSG00000007107) #14	Igsf8 (ENSMUSG00000038034) #15	Atp1a2 (ENSMUSG00000007097) #16	Kcnj9 (ENSMUSG00000038026) #17	Kcnj10 (ENSMUSG00000044708) #18	Pigm (ENSMUSG00000050229) #19	Slamf9 (ENSMUSG00000026548) #20	Igsf9 (ENSMUSG00000037995) #21	Tagln2 (ENSMUSG00000026547) #22	Cfap45 (ENSMUSG00000026546) #23	Vsig8 (ENSMUSG00000049598) #24	Slamf8 (ENSMUSG00000053318) #25	Fcrl6 (ENSMUSG00000070504) #26	Dusp23 (ENSMUSG00000026544) #27	Crp (ENSMUSG00000037942) #28	Apcs (ENSMUSG00000026542) #29	Or10j5 (ENSMUSG00000037924) #30	Or10j27 (ENSMUSG00000062527) #31	Or10j7 (ENSMUSG00000058981) #32	Or10j3 (ENSMUSG00000046643) #33	Or10j3b (ENSMUSG00000049456) #34	Fcer1a (ENSMUSG00000005339) #35	Or10j2 (ENSMUSG00000049605) #36	Mptx2 (ENSMUSG00000079180) ##29
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000162622 #7	ENSGT00390000014633 #8	ENSGT00940000155451 #9	ENSGT00390000010993 #10	ENSGT00950000182900.D.d.a #11	ENSGT00390000000230 #12	ENSGT00390000019377.a #13	ENSGT00940000162378 #14	ENSGT00940000159936 #16	ENSGT00940000161314 #15	ENSGT01080000257365.b.a.b.b #17	ENSGT00990000203615.b.a.a.a.a #18	ENSGT00390000017728 #19	ENSGT01030000234540.B.a.a.a.b.a.b #20	ENSGT00940000160444 #21	ENSGT00940000158886 #22	ENSGT00730000111174 #23	ENSGT00940000161712 #24	ENSGT01030000234540.C #25	ENSGT01050000244808.D.gb #26	ENSGT00940000161329 #27	ENSGT01100000263515.a.b.a.b.b.h.b #28	ENSGT01100000263515.a.b.a.b.b.h.a.b #29	ENSGT00940000159272.B #30	ENSGT00940000163654.d #31	ENSGT00940000163654.c #32	ENSGT00940000162870.c #33	ENSGT00940000162870.d #34	ENSGT01050000244808.A.b.a.b #35	ENSGT00940000159272.A #36	ENSGT01100000263515.a.b.a.b.b.h.a.a.b ##29
Steppe mouse	MODERN SPECIES	2796	Nhlh1 (ENSMSIG00000007585) #7	Ncstn (ENSMSIG00000007600) #8	Copa (ENSMSIG00000007673) #9	Pex19 (ENSMSIG00000007845) #10	Dcaf8 (ENSMSIG00000007890) #11	Pea15a (ENSMSIG00000007925) #12	Casq1 (ENSMSIG00000007938) #13	Atp1a4 (ENSMSIG00000007957) #14	Atp1a2 (ENSMSIG00000008038) #16	Igsf8 (ENSMSIG00000008092) #15	Kcnj9 (ENSMSIG00000008117) #17	Kcnj10 (ENSMSIG00000008133) #18	Pigm (ENSMSIG00000008141) #19	Slamf9 (ENSMSIG00000008147) #20	Igsf9 (ENSMSIG00000008196) #21	Tagln2 (ENSMSIG00000008348) #22	Cfap45 (ENSMSIG00000008381) #23	Vsig8 (ENSMSIG00000008400) #24	Slamf8 (ENSMSIG00000008459) #25	Fcrl6 (ENSMSIG00000008473) #26
spretus	MODERN SPECIES		Vangl2 (MGP_SPRETEiJ_G0015686)	Nhlh1 (MGP_SPRETEiJ_G0015687) #7	Ncstn (MGP_SPRETEiJ_G0015688) #8	Copa (MGP_SPRETEiJ_G0015689) #9	Pex19 (MGP_SPRETEiJ_G0015690) #10	Dcaf8 (MGP_SPRETEiJ_G0015691) #11	Pea15a (MGP_SPRETEiJ_G0015692) #12	Casq1 (MGP_SPRETEiJ_G0015693) #13	Atp1a4 (MGP_SPRETEiJ_G0015694) #14	Atp1a2 (MGP_SPRETEiJ_G0015696) #16	Kcnj9 (MGP_SPRETEiJ_G0015697) #17	Kcnj10 (MGP_SPRETEiJ_G0015698) #18	Pigm (MGP_SPRETEiJ_G0015699) #19	Slamf9 (MGP_SPRETEiJ_G0015700) #20	Igsf9 (MGP_SPRETEiJ_G0015701) #21	Tagln2 (MGP_SPRETEiJ_G0015702) #22	Cfap45 (MGP_SPRETEiJ_G0015703) #23	Vsig8 (MGP_SPRETEiJ_G0015704) #24	Slamf8 (MGP_SPRETEiJ_G0015705) #25	Fcrl6 (MGP_SPRETEiJ_G0015706) #26	Dusp23 (MGP_SPRETEiJ_G0015707) #27	Crp (MGP_SPRETEiJ_G0015708) #28	Apcs (MGP_SPRETEiJ_G0015709) #29	Or10j5 (MGP_SPRETEiJ_G0015710) #30	Or10j27 (MGP_SPRETEiJ_G0015711) #31	Or10j7 (MGP_SPRETEiJ_G0015712) #32	MGP_SPRETEiJ_G0015713 #33	Or10j3b (MGP_SPRETEiJ_G0015714) #34	Fcer1a (MGP_SPRETEiJ_G0015715) #35	MGP_SPRETEiJ_G0015716 #36	Mptx2 (MGP_SPRETEiJ_G0015717) ##29
Shrew mouse	MODERN SPECIES	18	Nhlh1 (MGP_PahariEiJ_G0028120) #7	Ncstn (MGP_PahariEiJ_G0028121) #8	Copa (MGP_PahariEiJ_G0028122) #9	Pex19 (MGP_PahariEiJ_G0028123) #10	Dcaf8 (MGP_PahariEiJ_G0028124) #11	Pea15a (MGP_PahariEiJ_G0028125) #12	Casq1 (MGP_PahariEiJ_G0028126) #13	Atp1a4 (MGP_PahariEiJ_G0028127) #14	Igsf8 (MGP_PahariEiJ_G0028128) #15	Atp1a2 (MGP_PahariEiJ_G0028129) #16	Kcnj9 (MGP_PahariEiJ_G0028130) #17	Kcnj10 (MGP_PahariEiJ_G0028131) #18	Pigm (MGP_PahariEiJ_G0028132) #19	Slamf9 (MGP_PahariEiJ_G0028133) #20	Igsf9 (MGP_PahariEiJ_G0028134) #21	Tagln2 (MGP_PahariEiJ_G0028135) #22	Cfap45 (MGP_PahariEiJ_G0028136) #23	Vsig8 (MGP_PahariEiJ_G0028137) #24	Slamf8 (MGP_PahariEiJ_G0028138) #25	MGP_PahariEiJ_G0028139 #26	Dusp23 (MGP_PahariEiJ_G0028140) #27	Crp (MGP_PahariEiJ_G0028141) #28	Apcs (MGP_PahariEiJ_G0028142) #29	Or10j5 (MGP_PahariEiJ_G0028143) #30	Or10j27 (MGP_PahariEiJ_G0028145) #31	Or10j7 (MGP_PahariEiJ_G0028146) #32	Or10j3b (MGP_PahariEiJ_G0028147) #34	Or10j2 (MGP_PahariEiJ_G0028148) #36	MGP_PahariEiJ_G0028149 ##29	MGP_PahariEiJ_G0028150 ##29	Ackr1 (MGP_PahariEiJ_G0028151) #37