Rodentia	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Arctic ground squirrel	MODERN SPECIES	46	GNGT2 (ENSUPAG00010006078) #7	B4GALNT2 (ENSUPAG00010006086) #8	IGF2BP1 (ENSUPAG00010006100) #9	GIP (ENSUPAG00010006136) #10	SNF8 (ENSUPAG00010006148) #11	UBE2Z (ENSUPAG00010006178) #12	ENSUPAG00010006195 #13	CALCOCO2 (ENSUPAG00010006243) #14	TTLL6 (ENSUPAG00010006267) #15	HOXB13 (ENSUPAG00010006301) #16	HOXB9 (ENSUPAG00010006305) #17	HOXB8 (ENSUPAG00010006310) #18	HOXB7 (ENSUPAG00010006312) #19	HOXB6 (ENSUPAG00010006317) #20	HOXB5 (ENSUPAG00010006320) #21	HOXB4 (ENSUPAG00010006325) #22	HOXB3 (ENSUPAG00010006328) #23	HOXB2 (ENSUPAG00010006336) #24	HOXB1 (ENSUPAG00010006340) #25	SKAP1 (ENSUPAG00010006345) #26	SNX11 (ENSUPAG00010006370) #27	CBX1 (ENSUPAG00010006381) #28	NFE2L1 (ENSUPAG00010006396) #29	COPZ2 (ENSUPAG00010006455) #30	CDK5RAP3 (ENSUPAG00010006466) #31	PRR15L (ENSUPAG00010006473) #32	PNPO (ENSUPAG00010006483) #33	SP2 (ENSUPAG00010006507) #34	SP6 (ENSUPAG00010006522) #35	SCRN2 (ENSUPAG00010006526) #36	LRRC46 (ENSUPAG00010006533) #37
Squirrel	MODERN SPECIES	90	B4GALNT2 (ENSSTOG00000007604) #8	IGF2BP1 (ENSSTOG00000010643) #9	GIP (ENSSTOG00000004043) #10	SNF8 (ENSSTOG00000004023) #11	UBE2Z (ENSSTOG00000000796) #12	ATP5MC1 (ENSSTOG00000013404)	ENSSTOG00000013395 #14	TTLL6 (ENSSTOG00000006016) #15	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #16	HOXB9 (ENSSTOG00000009741) #17	HOXB8 (ENSSTOG00000028337) #18	HOXB7 (ENSSTOG00000025657) #19	HOXB6 (ENSSTOG00000020303) #20	HOXB5 (ENSSTOG00000009740) #21	HOXB4 (ENSSTOG00000009734) #22	HOXB3 (ENSSTOG00000025093) #23	HOXB2 (ENSSTOG00000023586) #24	HOXB1 (ENSSTOG00000028630) #25	SKAP1 (ENSSTOG00000013692) #26	SNX11 (ENSSTOG00000013684) #27	CBX1 (ENSSTOG00000023986) #28	NFE2L1 (ENSSTOG00000013664) #29	ENSSTOG00000027550 #30	CDK5RAP3 (ENSSTOG00000006244) #31	PRR15L (ENSSTOG00000006235) #32	PNPO (ENSSTOG00000006221) #33	SP2 (ENSSTOG00000015926) #34	SP6 (ENSSTOG00000001607) #35	SCRN2 (ENSSTOG00000027108) #36	LRRC46 (ENSSTOG00000002068) #37
Alpin marmot	MODERN SPECIES	42	PHOSPHO1 (ENSMMMG00000000434)	ABI3 (ENSMMMG00000000452)	GNGT2 (ENSMMMG00000000525) #7	B4GALNT2 (ENSMMMG00000000569) #8	IGF2BP1 (ENSMMMG00000000613) #9	GIP (ENSMMMG00000000652) #10	SNF8 (ENSMMMG00000000680) #11	UBE2Z (ENSMMMG00000000717) #12	ATP5MC1 (ENSMMMG00000000731)	ENSMMMG00000000759 #14	TTLL6 (ENSMMMG00000001013) #15	HOXB13 (ENSMMMG00000001064) #16	HOXB7 (ENSMMMG00000001087) #19	HOXB6 (ENSMMMG00000001098) #20	HOXB5 (ENSMMMG00000001112) #21	HOXB4 (ENSMMMG00000001129) #22	HOXB3 (ENSMMMG00000001139) #23	HOXB1 (ENSMMMG00000001151) #25	SKAP1 (ENSMMMG00000001168) #26	SNX11 (ENSMMMG00000001243) #27	CBX1 (ENSMMMG00000001254) #28	NFE2L1 (ENSMMMG00000001284) #29	COPZ2 (ENSMMMG00000001352) #30	CDK5RAP3 (ENSMMMG00000001404) #31	GOSR2 (ENSMMMG00000001471)	RPRML (ENSMMMG00000001486)	LYZL6 (ENSMMMG00000001501)	ENSMMMG00000001520	ENSMMMG00000001551	ENSMMMG00000001756	ENSMMMG00000001792
Eurasian red squirrel	MODERN SPECIES	12	B4GALNT2 (ENSSVLG00005020850) #8	IGF2BP1 (ENSSVLG00005020596) #9	GIP (ENSSVLG00005020522) #10	SNF8 (ENSSVLG00005020472) #11	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428) #12	ATP5MC1 (ENSSVLG00005020344)	CALCOCO2 (ENSSVLG00005020296) #14	TTLL6 (ENSSVLG00005020005) #15	HOXB13 (ENSSVLG00005019820) #16	HOXB9 (ENSSVLG00005019725) #17	HOXB8 (ENSSVLG00005019675) #18	HOXB7 (ENSSVLG00005019618) #19	HOXB6 (ENSSVLG00005019586) #20	HOXB5 (ENSSVLG00005019546) #21	HOXB4 (ENSSVLG00005019455) #22	HOXB3 (ENSSVLG00005019421) #23	HOXB2 (ENSSVLG00005019378) #24	HOXB1 (ENSSVLG00005019304) #25	SKAP1 (ENSSVLG00005019232) #26	SNX11 (ENSSVLG00005019122) #27	CBX1 (ENSSVLG00005019034) #28	NFE2L1 (ENSSVLG00005018798) #29	COPZ2 (ENSSVLG00005018641) #30	CDK5RAP3 (ENSSVLG00005018459) #31	PRR15L (ENSSVLG00005018399) #32	PNPO (ENSSVLG00005018295) #33	ENSSVLG00005018218 #34	SP6 (ENSSVLG00005018194) #35	SCRN2 (ENSSVLG00005018077) #36	LRRC46 (ENSSVLG00005018036) #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Long-tailed chinchilla	MODERN SPECIES	158	ABI3 (ENSCLAG00000015475)	GNGT2 (ENSCLAG00000014970) #7	B4GALNT2 (ENSCLAG00000016224) #8	IGF2BP1 (ENSCLAG00000015853) #9	ENSCLAG00000014301 #10	SNF8 (ENSCLAG00000013387) #11	UBE2Z (ENSCLAG00000016068) #12	ATP5MC1 (ENSCLAG00000015723)	CALCOCO2 (ENSCLAG00000015881) #14	TTLL6 (ENSCLAG00000013529) #15	HOXB13 (ENSCLAG00000014855) #16	ENSCLAG00000015198 #17	HOXB7 (ENSCLAG00000014906) #19	HOXB6 (ENSCLAG00000015524) #20	HOXB5 (ENSCLAG00000014374) #21	HOXB4 (ENSCLAG00000014725) #22	HOXB3 (ENSCLAG00000015322) #23	HOXB2 (ENSCLAG00000015271) #24	HOXB1 (ENSCLAG00000013047) #25	SKAP1 (ENSCLAG00000015423) #26	SNX11 (ENSCLAG00000015837) #27	CBX1 (ENSCLAG00000013587) #28	NFE2L1 (ENSCLAG00000014836) #29	COPZ2 (ENSCLAG00000013544) #30	CDK5RAP3 (ENSCLAG00000012292) #31	PRR15L (ENSCLAG00000017903) #32	PNPO (ENSCLAG00000013871) #33	SP2 (ENSCLAG00000014115) #34	SP6 (ENSCLAG00000016276) #35	LRRC46 (ENSCLAG00000016713) #37	SCRN2 (ENSCLAG00000013965) #36
Degu	MODERN SPECIES	97	ABI3 (ENSODEG00000017358)	GNGT2 (ENSODEG00000017526) #7	B4GALNT2 (ENSODEG00000018456) #8	ENSODEG00000016991 #9	ENSODEG00000017109	GIP (ENSODEG00000017003) #10	ENSODEG00000017032 #11	UBE2Z (ENSODEG00000017306) #12	ATP5MC1 (ENSODEG00000017366)	TTLL6 (ENSODEG00000017145) #15	HOXB13 (ENSODEG00000017199) #16	HOXB9 (ENSODEG00000017293) #17	HOXB8 (ENSODEG00000017119) #18	HOXB6 (ENSODEG00000016988) #20	HOXB5 (ENSODEG00000017253) #21	HOXB4 (ENSODEG00000017038) #22	HOXB3 (ENSODEG00000017116) #23	HOXB2 (ENSODEG00000017153) #24	HOXB1 (ENSODEG00000017050) #25	SKAP1 (ENSODEG00000017533) #26	SNX11 (ENSODEG00000017458) #27	CBX1 (ENSODEG00000017272) #28	NFE2L1 (ENSODEG00000017348) #29	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #30	ENSODEG00000017229 #31	PNPO (ENSODEG00000017424) #33	SP2 (ENSODEG00000017126) #34	SP6 (ENSODEG00000017625) #35	SCRN2 (ENSODEG00000017395) #36	LRRC46 (ENSODEG00000017367) #37
Naked mole-rat female	MODERN SPECIES	12	B4GALNT2 (ENSHGLG00000011792) #8	IGF2BP1 (ENSHGLG00000010492) #9	ENSHGLG00000010703 #10	SNF8 (ENSHGLG00000011519) #11	UBE2Z (ENSHGLG00000016280) #12	ATP5MC1 (ENSHGLG00000035460)	CALCOCO2 (ENSHGLG00000012114) #14	TTLL6 (ENSHGLG00000019187) #15	HOXB13 (ENSHGLG00000014634) #16	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #17	HOXB8 (ENSHGLG00000038380) #18	HOXB7 (ENSHGLG00000045318) #19	HOXB6 (ENSHGLG00000012400) #20	HOXB5 (ENSHGLG00000039265) #21	HOXB4 (ENSHGLG00000034075) #22	HOXB3 (ENSHGLG00000010686) #23	HOXB2 (ENSHGLG00000010090) #24	HOXB1 (ENSHGLG00000009781) #25	SKAP1 (ENSHGLG00000014563) #26	SNX11 (ENSHGLG00000016837) #27	CBX1 (ENSHGLG00000013574) #28	NFE2L1 (ENSHGLG00000012592) #29	COPZ2 (ENSHGLG00000018543) #30	CDK5RAP3 (ENSHGLG00000019464) #31	PRR15L (ENSHGLG00000014696) #32	PNPO (ENSHGLG00000013159) #33	SP2 (ENSHGLG00000009902) #34	SP6 (ENSHGLG00000021113) #35	SCRN2 (ENSHGLG00000041375) #36	LRRC46 (ENSHGLG00000035931) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Muroidea	ANCESTRAL SPECIES		ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a #13	ENSGT00940000159720.ab #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.a.a ##28	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a #13	ENSGT00940000159720.`b.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.a.b ##28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Chinese hamster chok1gshd	MODERN SPECIES	33	B4galnt2 (ENSCGRG00001014272) #8	ENSCGRG00001000282 #9	Gip (ENSCGRG00001021533) #10	Snf8 (ENSCGRG00001000737) #11	Ube2z (ENSCGRG00001019150) #12	ENSCGRG00001022606 #13	ENSCGRG00001010560	ENSCGRG00001011435 #14	Ttll6 (ENSCGRG00001018398) #15	Hoxb13 (ENSCGRG00001015060) #16	Hoxb9 (ENSCGRG00001015314) #17	Hoxb8 (ENSCGRG00001020235) #18	Hoxb7 (ENSCGRG00001021590) #19	Hoxb6 (ENSCGRG00001015674) #20	Hoxb5 (ENSCGRG00001016167) #21	Hoxb4 (ENSCGRG00001022431) #22	Hoxb3 (ENSCGRG00001016667) #23	Hoxb2 (ENSCGRG00001017587) #24	Hoxb1 (ENSCGRG00001024619) #25	ENSCGRG00001023355 #26	ENSCGRG00001020759 #26	Snx11 (ENSCGRG00001022221) #27	Cbx1 (ENSCGRG00001014799) ##28	Nfe2l1 (ENSCGRG00001015287) #29	Copz2 (ENSCGRG00001014767) #30	Cdk5rap3 (ENSCGRG00001006966) #31	Prr15l (ENSCGRG00001008926) #32	Pnpo (ENSCGRG00001018189) #33	Sp2 (ENSCGRG00001010976) #34	Sp6 (ENSCGRG00001002797) #35	Scrn2 (ENSCGRG00001022143) #36
Golden Hamster	MODERN SPECIES	674	Phospho1 (ENSMAUG00000012074)	Abi3 (ENSMAUG00000021085)	Gngt2 (ENSMAUG00000019144) #7	B4galnt2 (ENSMAUG00000007916) #8	Gip (ENSMAUG00000009238) #10	Snf8 (ENSMAUG00000001857) #11	Ube2z (ENSMAUG00000007792) #12	ENSMAUG00000021751 #13	Ttll6 (ENSMAUG00000020973) #15	Hoxb13 (ENSMAUG00000008407) #16	Hoxb9 (ENSMAUG00000017720) #17	Hoxb8 (ENSMAUG00000012636) #18	Hoxb7 (ENSMAUG00000021297) #19	Hoxb6 (ENSMAUG00000021423) #20	Hoxb5 (ENSMAUG00000021419) #21	Hoxb4 (ENSMAUG00000009367) #22	Hoxb3 (ENSMAUG00000011251) #23	Hoxb2 (ENSMAUG00000021979) #24	Hoxb1 (ENSMAUG00000013237) #25	Skap1 (ENSMAUG00000022191) #26	Snx11 (ENSMAUG00000021528) #27	ENSMAUG00000003463 ##28	Nfe2l1 (ENSMAUG00000020456) #29	Copz2 (ENSMAUG00000010560) #30	Cdk5rap3 (ENSMAUG00000007991) #31	Pnpo (ENSMAUG00000021706) #33	Sp2 (ENSMAUG00000019269) #34	Sp6 (ENSMAUG00000009667) #35	Scrn2 (ENSMAUG00000010014) #36	Lrrc46 (ENSMAUG00000019416) #37	Mrpl10 (ENSMAUG00000000820)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a #13	ENSGT00940000159720.ab #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Prairie vole	MODERN SPECIES	114				ENSMOCG00000004266	ENSMOCG00000021226 #10	Snf8 (ENSMOCG00000016684) #11	Ube2z (ENSMOCG00000018241) #12	ENSMOCG00000013163 #13	Ttll6 (ENSMOCG00000021089) #15	Hoxb13 (ENSMOCG00000021389) #16	Hoxb9 (ENSMOCG00000020312) #17	Hoxb8 (ENSMOCG00000018435) #18	Hoxb7 (ENSMOCG00000020820) #19	Hoxb6 (ENSMOCG00000020355) #20	Hoxb5 (ENSMOCG00000014523) #21	Hoxb4 (ENSMOCG00000022964) #22	Hoxb3 (ENSMOCG00000020739) #23	Hoxb2 (ENSMOCG00000014846) #24	Hoxb1 (ENSMOCG00000002452) #25	Skap1 (ENSMOCG00000018431) #26	Snx11 (ENSMOCG00000019303) #27	Cbx1 (ENSMOCG00000001520) #28	Nfe2l1 (ENSMOCG00000016002) #29	Copz2 (ENSMOCG00000022427) #30	Cdk5rap3 (ENSMOCG00000019534) #31	Prr15l (ENSMOCG00000006695) #32	Pnpo (ENSMOCG00000011655) #33	Sp2 (ENSMOCG00000020935) #34	Sp6 (ENSMOCG00000007065) #35	Scrn2 (ENSMOCG00000019511) #36	Lrrc46 (ENSMOCG00000016707) #37
Northern American deer mouse	MODERN SPECIES	21	Phospho1 (ENSPEMG00000026539)	Abi3 (ENSPEMG00000014242)	Gngt2 (ENSPEMG00000027491) #7	B4galnt2 (ENSPEMG00000020717) #8	Igf2bp1 (ENSPEMG00000021974) #9	Gip (ENSPEMG00000021184) #10	Snf8 (ENSPEMG00000022229) #11	Ube2z (ENSPEMG00000020953) #12	Atp5g1 (ENSPEMG00000020590) #13	ENSPEMG00000028729 #14	ENSPEMG00000025676 #14	Ttll6 (ENSPEMG00000021918) #15	Hoxb13 (ENSPEMG00000021511) #16	Hoxb9 (ENSPEMG00000027158) #17	Hoxb5 (ENSPEMG00000030101) #21	Hoxb4 (ENSPEMG00000029805) #22	Hoxb3 (ENSPEMG00000028692) #23	Hoxb2 (ENSPEMG00000029510) #24	Hoxb1 (ENSPEMG00000023977) #25	Skap1 (ENSPEMG00000000585) #26	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #27	Cbx1 (ENSPEMG00000020976) ##28	Nfe2l1 (ENSPEMG00000010512) #29	Copz2 (ENSPEMG00000011137) #30	Cdk5rap3 (ENSPEMG00000020712) #31	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #32	Pnpo (ENSPEMG00000025094) #33	Sp2 (ENSPEMG00000017112) #34	Sp6 (ENSPEMG00000001231) #35
Murinae	ANCESTRAL SPECIES	6	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #37
Mus	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36
Mus_C	ANCESTRAL SPECIES	3	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #26	ENSGT00940000160113 #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #29	ENSGT00390000004405.b #30	ENSGT00390000000713 #31	ENSGT00940000154534.a #32	ENSGT00390000011219 #33	ENSGT00940000159590 #34	ENSGT00940000161498 #35	ENSGT00390000013474.b.a #36
Steppe mouse	MODERN SPECIES	3291	Gngt2 (ENSMSIG00000019268) #7	B4galnt2 (ENSMSIG00000019230) #8	Igf2bp1 (ENSMSIG00000019193) #9	Gip (ENSMSIG00000019162) #10	Snf8 (ENSMSIG00000019072) #11	Ube2z (ENSMSIG00000019038) #12	Atp5g1 (ENSMSIG00000018986) #13	ENSMSIG00000018956 #14	Ttll6 (ENSMSIG00000018881) #15	Hoxb13 (ENSMSIG00000018865) #16	Hoxb9 (ENSMSIG00000018823) #17	Hoxb8 (ENSMSIG00000018807) #18	Hoxb7 (ENSMSIG00000018805) #19	Hoxb6 (ENSMSIG00000018795) #20	Hoxb5 (ENSMSIG00000018787) #21	Hoxb4 (ENSMSIG00000018777) #22	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #23	Hoxb2 (ENSMSIG00000018769) #24	Hoxb1 (ENSMSIG00000018752) #25	Skap1 (ENSMSIG00000018601) #26	Snx11 (ENSMSIG00000018546) #27	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #28	Nfe2l1 (ENSMSIG00000018374) #29	Copz2 (ENSMSIG00000018337) #30	Cdk5rap3 (ENSMSIG00000018309) #31	ENSMSIG00000018270 #32	ENSMSIG00000018267 #33	Sp2 (ENSMSIG00000018237) #34	Sp6 (ENSMSIG00000018223) #35
spretus	MODERN SPECIES	2	Gngt2 (MGP_SPRETEiJ_G0017860) #7	B4galnt2 (MGP_SPRETEiJ_G0017861) #8	Igf2bp1 (MGP_SPRETEiJ_G0017862) #9	Gip (MGP_SPRETEiJ_G0017863) #10	Snf8 (MGP_SPRETEiJ_G0017864) #11	Ube2z (MGP_SPRETEiJ_G0017865) #12	Atp5g1 (MGP_SPRETEiJ_G0017866) #13	MGP_SPRETEiJ_G0017867 #14	Ttll6 (MGP_SPRETEiJ_G0017868) #15	Hoxb13 (MGP_SPRETEiJ_G0017869) #16	Hoxb9 (MGP_SPRETEiJ_G0017870) #17	Hoxb8 (MGP_SPRETEiJ_G0017871) #18	Hoxb7 (MGP_SPRETEiJ_G0017872) #19	Hoxb6 (MGP_SPRETEiJ_G0017873) #20	Hoxb5 (MGP_SPRETEiJ_G0017874) #21	Hoxb4 (MGP_SPRETEiJ_G0017875) #22	Hoxb3 (MGP_SPRETEiJ_G0017876) #23	Hoxb2 (MGP_SPRETEiJ_G0017877) #24	Hoxb1 (MGP_SPRETEiJ_G0017878) #25	MGP_SPRETEiJ_G0017879 #26	Snx11 (MGP_SPRETEiJ_G0017880) #27	Cbx1 (MGP_SPRETEiJ_G0017881) #28	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #29	Copz2 (MGP_SPRETEiJ_G0017884) #30	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #31	Prr15l (MGP_SPRETEiJ_G0017886) #32	Pnpo (MGP_SPRETEiJ_G0017887) #33	Sp2 (MGP_SPRETEiJ_G0017888) #34	Sp6 (MGP_SPRETEiJ_G0017889) #35	Scrn2 (MGP_SPRETEiJ_G0017890) #36
Mouse	MODERN SPECIES	2	Gngt2 (ENSMUSG00000038811) #7	B4galnt2 (ENSMUSG00000013418) #8	Igf2bp1 (ENSMUSG00000013415) #9	Gip (ENSMUSG00000014351) #10	Snf8 (ENSMUSG00000006058) #11	Ube2z (ENSMUSG00000014349) #12	Atp5g1 (ENSMUSG00000006057) #13	Calcoco2 (ENSMUSG00000006056) #14	Ttll6 (ENSMUSG00000038756) #15	Hoxb13 (ENSMUSG00000049604) #16	Hoxb9 (ENSMUSG00000020875) #17	Hoxb8 (ENSMUSG00000056648) #18	Hoxb7 (ENSMUSG00000038721) #19	Hoxb6 (ENSMUSG00000000690) #20	Hoxb5 (ENSMUSG00000038700) #21	Hoxb4 (ENSMUSG00000038692) #22	Hoxb3 (ENSMUSG00000048763) #23	Hoxb2 (ENSMUSG00000075588) #24	Hoxb1 (ENSMUSG00000018973) #25	Skap1 (ENSMUSG00000057058) #26	Snx11 (ENSMUSG00000020876) #27	Cbx1 (ENSMUSG00000018666) #28	Nfe2l1 (ENSMUSG00000038615) #29	Copz2 (ENSMUSG00000018672) #30	Cdk5rap3 (ENSMUSG00000018669) #31	Prr15l (ENSMUSG00000047040) #32	Pnpo (ENSMUSG00000018659) #33	Sp2 (ENSMUSG00000018678) #34	Sp6 (ENSMUSG00000038560) #35	Scrn2 (ENSMUSG00000020877) #36	Lrrc46 (ENSMUSG00000020878) #37
Ryukyu mouse	MODERN SPECIES	2	Gngt2 (MGP_CAROLIEiJ_G0017014) #7	B4galnt2 (MGP_CAROLIEiJ_G0017015) #8	Igf2bp1 (MGP_CAROLIEiJ_G0017016) #9	Gip (MGP_CAROLIEiJ_G0017017) #10	Snf8 (MGP_CAROLIEiJ_G0017018) #11	MGP_CAROLIEiJ_G0017019 #12	MGP_CAROLIEiJ_G0017020 #13	MGP_CAROLIEiJ_G0017021 #14	Ttll6 (MGP_CAROLIEiJ_G0017022) #15	Hoxb13 (MGP_CAROLIEiJ_G0017023) #16	Hoxb9 (MGP_CAROLIEiJ_G0017024) #17	Hoxb8 (MGP_CAROLIEiJ_G0017025) #18	Hoxb7 (MGP_CAROLIEiJ_G0017026) #19	Hoxb6 (MGP_CAROLIEiJ_G0017027) #20	Hoxb5 (MGP_CAROLIEiJ_G0017028) #21	Hoxb4 (MGP_CAROLIEiJ_G0017029) #22	Hoxb3 (MGP_CAROLIEiJ_G0017030) #23	Hoxb2 (MGP_CAROLIEiJ_G0017031) #24	Hoxb1 (MGP_CAROLIEiJ_G0017032) #25	Skap1 (MGP_CAROLIEiJ_G0017033) #26	Snx11 (MGP_CAROLIEiJ_G0017034) #27	Cbx1 (MGP_CAROLIEiJ_G0017035) #28	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #29	Copz2 (MGP_CAROLIEiJ_G0017038) #30	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #31	Prr15l (MGP_CAROLIEiJ_G0017040) #32	Pnpo (MGP_CAROLIEiJ_G0017041) #33	Sp2 (MGP_CAROLIEiJ_G0017042) #34	Sp6 (MGP_CAROLIEiJ_G0017043) #35	MGP_CAROLIEiJ_G0017044 #36
Shrew mouse	MODERN SPECIES	5	Gngt2 (MGP_PahariEiJ_G0018144) #7	B4galnt2 (MGP_PahariEiJ_G0018145) #8	MGP_PahariEiJ_G0018146 #9	Gip (MGP_PahariEiJ_G0018147) #10	Snf8 (MGP_PahariEiJ_G0018148) #11	Ube2z (MGP_PahariEiJ_G0018149) #12	Atp5g1 (MGP_PahariEiJ_G0018150) #13	MGP_PahariEiJ_G0018151 #14	Ttll6 (MGP_PahariEiJ_G0018152) #15	Hoxb13 (MGP_PahariEiJ_G0018153) #16	Hoxb9 (MGP_PahariEiJ_G0018154) #17	Hoxb8 (MGP_PahariEiJ_G0018155) #18	Hoxb7 (MGP_PahariEiJ_G0018156) #19	Hoxb6 (MGP_PahariEiJ_G0018157) #20	Hoxb5 (MGP_PahariEiJ_G0018158) #21	Hoxb4 (MGP_PahariEiJ_G0018159) #22	Hoxb3 (MGP_PahariEiJ_G0018160) #23	Hoxb2 (MGP_PahariEiJ_G0018161) #24	Hoxb1 (MGP_PahariEiJ_G0018162) #25	Skap1 (MGP_PahariEiJ_G0018163) #26	Snx11 (MGP_PahariEiJ_G0018164) #27	Cbx1 (MGP_PahariEiJ_G0018165) #28	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #29	Copz2 (MGP_PahariEiJ_G0018168) #30	Cdk5rap3 (MGP_PahariEiJ_G0018169) #31	Prr15l (MGP_PahariEiJ_G0018170) #32	Pnpo (MGP_PahariEiJ_G0018171) #33	Sp2 (MGP_PahariEiJ_G0018172) #34	Sp6 (MGP_PahariEiJ_G0018173) #35	Scrn2 (MGP_PahariEiJ_G0018174) #36
Rat	MODERN SPECIES	1	Phospho1 (ENSRNOG00000005569)	Abi3 (ENSRNOG00000005575)	B4galnt2 (ENSRNOG00000067203) #8	Igf2bp1 (ENSRNOG00000006122) #9	Gip (ENSRNOG00000006306) #10	Snf8 (ENSRNOG00000006500) #11	Ube2z (ENSRNOG00000006868) #12	ENSRNOG00000066153 #14	Ttll6 (ENSRNOG00000004939) #15	Hoxb13 (ENSRNOG00000007491) #16	Hoxb9 (ENSRNOG00000007573) #17	Hoxb8 (ENSRNOG00000007585) #18	Hoxb7 (ENSRNOG00000007611) #19	Hoxb6 (ENSRNOG00000007823) #20	Hoxb5 (ENSRNOG00000008010) #21	Hoxb4 (ENSRNOG00000008191) #22	Hoxb3 (ENSRNOG00000008313) #23	Hoxb2 (ENSRNOG00000008365) #24	Hoxb1 (ENSRNOG00000008506) #25	Skap1 (ENSRNOG00000023881) #26	Snx11 (ENSRNOG00000008642) #27	Cbx1 (ENSRNOG00000008689) #28	Nfe2l1 (ENSRNOG00000008830) #29	Copz2 (ENSRNOG00000009225) #30	Cdk5rap3 (ENSRNOG00000048747) #31	Prr15l (ENSRNOG00000049162) #32	Pnpo (ENSRNOG00000046493) #33	Sp2 (ENSRNOG00000010492) #34	Sp6 (ENSRNOG00000023551) #35	Scrn2 (ENSRNOG00000010214) #36	Lrrc46 (ENSRNOG00000009902) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Gngt2 (ENSNGAG00000001081) #7	B4galnt2 (ENSNGAG00000016426) #8	Igf2bp1 (ENSNGAG00000015679) #9	Gip (ENSNGAG00000020354) #10	Snf8 (ENSNGAG00000001366) #11	Ube2z (ENSNGAG00000024296) #12	ENSNGAG00000024212 #13	ENSNGAG00000023585 #14	Ttll6 (ENSNGAG00000011763) #15	Hoxb13 (ENSNGAG00000011053) #16	Hoxb9 (ENSNGAG00000010851) #17	Hoxb8 (ENSNGAG00000010647) #18	Hoxb7 (ENSNGAG00000010205) #19	Hoxb6 (ENSNGAG00000000973) #20	Hoxb5 (ENSNGAG00000023238) #21	Hoxb4 (ENSNGAG00000021768) #22	Hoxb3 (ENSNGAG00000020227) #23	Hoxb2 (ENSNGAG00000019089) #24	Hoxb1 (ENSNGAG00000018593) #25	Skap1 (ENSNGAG00000012571) #26	Snx11 (ENSNGAG00000010446) #27	Cbx1 (ENSNGAG00000006760) #28	Nfe2l1 (ENSNGAG00000000736) #29	Copz2 (ENSNGAG00000023713) #30	ENSNGAG00000000747 #31	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432) #32	Pnpo (ENSNGAG00000020016) #33	Sp2 (ENSNGAG00000017612) #34	Sp6 (ENSNGAG00000015868) #35	Scrn2 (ENSNGAG00000023806) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	Gngt2 (ENSJJAG00000002044) #7	ENSJJAG00000002566	B4galnt2 (ENSJJAG00000006322) #8	Igf2bp1 (ENSJJAG00000002687) #9	Gip (ENSJJAG00000010688) #10	Snf8 (ENSJJAG00000006012) #11	ENSJJAG00000003530 #12	ENSJJAG00000010301 #13	Ttll6 (ENSJJAG00000010253) #15	Hoxb13 (ENSJJAG00000010401) #16	Hoxb9 (ENSJJAG00000009821) #17	Hoxb8 (ENSJJAG00000002398) #18	Hoxb7 (ENSJJAG00000001284) #19	Hoxb6 (ENSJJAG00000000997) #20	Hoxb5 (ENSJJAG00000000763) #21	Hoxb4 (ENSJJAG00000002642) #22	Hoxb3 (ENSJJAG00000007804) #23	Hoxb2 (ENSJJAG00000009465) #24	Hoxb1 (ENSJJAG00000001073) #25	Skap1 (ENSJJAG00000003458) #26	ENSJJAG00000005754 #27	ENSJJAG00000007753 ##28	Nfe2l1 (ENSJJAG00000006432) #29	Copz2 (ENSJJAG00000001025) #30	ENSJJAG00000002511 #31	Prr15l (ENSJJAG00000006478) #32	Pnpo (ENSJJAG00000023608) #33	Sp2 (ENSJJAG00000003061) #34	Sp6 (ENSJJAG00000006452) #35	Scrn2 (ENSJJAG00000023635) #36	Lrrc46 (ENSJJAG00000010412) #37
Kangaroo rat	MODERN SPECIES	326	Phospho1 (ENSDORG00000002249)	Abi3 (ENSDORG00000002245)	Gngt2 (ENSDORG00000023588) #7	Igf2bp1 (ENSDORG00000014371) #9	Snf8 (ENSDORG00000009262) #11	Ube2z (ENSDORG00000009258) #12	ENSDORG00000008511	ENSDORG00000028385	ENSDORG00000024585 #14	Hoxb13 (ENSDORG00000008369) #16	Hoxb9 (ENSDORG00000027423) #17	Hoxb8 (ENSDORG00000007906) #18	Hoxb7 (ENSDORG00000007905) #19	Hoxb6 (ENSDORG00000023877) #20	Hoxb5 (ENSDORG00000007900) #21	Hoxb4 (ENSDORG00000007899) #22	Hoxb3 (ENSDORG00000007898) #23	Hoxb2 (ENSDORG00000007897) #24	Hoxb1 (ENSDORG00000007896) #25	Snx11 (ENSDORG00000029078) #27	Cbx1 (ENSDORG00000026399) #28	Nfe2l1 (ENSDORG00000000715) #29	Copz2 (ENSDORG00000013441) #30	Prr15l (ENSDORG00000027427) #32	Pnpo (ENSDORG00000014110) #33	Sp2 (ENSDORG00000014109) #34	Sp6 (ENSDORG00000026201) #35	Scrn2 (ENSDORG00000002361) #36	Osbpl7 (ENSDORG00000002354)	Tbx21 (ENSDORG00000013302)	Npepps (ENSDORG00000009627)