Theria	ANCESTRAL SPECIES	9	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000172404	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00640000092844	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Eutheria	ANCESTRAL SPECIES	4	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159720 #13	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Bovidae	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Caprinae	ANCESTRAL SPECIES	1	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.g.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000154688.b.j #26	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Goat	MODERN SPECIES	10	B4GALNT2 (ENSCHIG00000013924) #7	IGF2BP1 (ENSCHIG00000022316) #8	GIP (ENSCHIG00000010936) #9	SNF8 (ENSCHIG00000014794) #10	ENSCHIG00000020962 #11	UBE2Z (ENSCHIG00000003883) #12	ENSCHIG00000016881 #13	CALCOCO2 (ENSCHIG00000025313) #14	TTLL6 (ENSCHIG00000022654) #15	HOXB13 (ENSCHIG00000026703) #16	HOXB9 (ENSCHIG00000022791) #17	HOXB8 (ENSCHIG00000015504) #18	HOXB7 (ENSCHIG00000017532) #19	HOXB6 (ENSCHIG00000008881) #20	HOXB5 (ENSCHIG00000023147) #21	HOXB4 (ENSCHIG00000025323) #22	HOXB3 (ENSCHIG00000013978) #23	HOXB2 (ENSCHIG00000025836) #24	HOXB1 (ENSCHIG00000017872) #25	ENSCHIG00000010180 #26	ENSCHIG00000015920 #27	ENSCHIG00000026878 #28	SNX11 (ENSCHIG00000017547) #29	CBX1 (ENSCHIG00000010985) #30	NFE2L1 (ENSCHIG00000015427) #31	COPZ2 (ENSCHIG00000026544) #32	CDK5RAP3 (ENSCHIG00000025420) #33	PRR15L (ENSCHIG00000008261) #34	PNPO (ENSCHIG00000004606) #35	SP2 (ENSCHIG00000018648) #36	SP6 (ENSCHIG00000009897) #37
Rambouillet Sheep	MODERN SPECIES	2	B4GALNT2 (ENSOARG00020022870) #7	ENSOARG00020022839	IGF2BP1 (ENSOARG00020022766) #8	GIP (ENSOARG00020022695) #9	UBE2Z (ENSOARG00020022664) #12	ATP5MC1 (ENSOARG00020022590) #13	CALCOCO2 (ENSOARG00020022295) #14	ENSOARG00020022258 #15	SNF8 (ENSOARG00020022227) ##10	HOXB13 (ENSOARG00020022195) #16	HOXB9 (ENSOARG00020022138) #17	HOXB8 (ENSOARG00020022064) #18	HOXB7 (ENSOARG00020022042) #19	HOXB6 (ENSOARG00020022021) #20	HOXB5 (ENSOARG00020022004) #21	HOXB4 (ENSOARG00020021954) #22	HOXB3 (ENSOARG00020021943) #23	HOXB2 (ENSOARG00020021907) #24	HOXB1 (ENSOARG00020021886) #25	SKAP1 (ENSOARG00020021817) #28	SNX11 (ENSOARG00020021783) #29	CBX1 (ENSOARG00020021741) #30	NFE2L1 (ENSOARG00020021460) #31	COPZ2 (ENSOARG00020021377) #32	CDK5RAP3 (ENSOARG00020021339) #33	PRR15L (ENSOARG00020021319) #34	PNPO (ENSOARG00020021017) #35	SP2 (ENSOARG00020020972) #36	SP6 (ENSOARG00020020944) #37	SCRN2 (ENSOARG00020020770)	LRRC46 (ENSOARG00020020663)
Bovinae	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
American bison	MODERN SPECIES	3101	ABI3 (ENSBBBG00000021279)	GNGT2 (ENSBBBG00000021294)	B4GALNT2 (ENSBBBG00000021305) #7	IGF2BP1 (ENSBBBG00000021334) #8	GIP (ENSBBBG00000021349) #9	SNF8 (ENSBBBG00000021356) #10	UBE2Z (ENSBBBG00000021371) #12	ATP5MC1 (ENSBBBG00000021377)	CALCOCO2 (ENSBBBG00000005726) #14	TTLL6 (ENSBBBG00000021540) #15	HOXB13 (ENSBBBG00000021546) #16	HOXB9 (ENSBBBG00000021558) #17	HOXB7 (ENSBBBG00000021565) #19	HOXB6 (ENSBBBG00000021567) #20	HOXB5 (ENSBBBG00000021577) #21	HOXB4 (ENSBBBG00000021585) #22	HOXB3 (ENSBBBG00000005740) #23	HOXB2 (ENSBBBG00000021598) #24	HOXB1 (ENSBBBG00000021601) #25	SKAP1 (ENSBBBG00000021634) #28	SNX11 (ENSBBBG00000021652) #29	ENSBBBG00000021675 ##30	NFE2L1 (ENSBBBG00000021740) #31	COPZ2 (ENSBBBG00000021782) #32	CDK5RAP3 (ENSBBBG00000021808) #33	PRR15L (ENSBBBG00000021809) #34	PNPO (ENSBBBG00000021862) #35	SP2 (ENSBBBG00000021914) #36	SP6 (ENSBBBG00000021924) #37	SCRN2 (ENSBBBG00000021958)	LRRC46 (ENSBBBG00000021972)
Bos	ANCESTRAL SPECIES	1	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000154688.b.k.a #26	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.i #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590.e.b #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Bos_b	ANCESTRAL SPECIES	15	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000154688.b.k.a #26	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.i #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590.e.b #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Hybrid Bos Indicus	MODERN SPECIES	10	ABI3 (ENSBIXG00005007948)	B4GALNT2 (ENSBIXG00005007929) #7	IGF2BP1 (ENSBIXG00005007917) #8	GIP (ENSBIXG00005007892) #9	SNF8 (ENSBIXG00005007866) #10	UBE2Z (ENSBIXG00005029277) #12	ENSBIXG00005029305 #13	CALCOCO2 (ENSBIXG00005029366) #14	ENSBIXG00005029447 #15	HOXB13 (ENSBIXG00005029474) #16	HOXB9 (ENSBIXG00005029519) #17	HOXB8 (ENSBIXG00005029530) #18	HOXB7 (ENSBIXG00005029546) #19	HOXB6 (ENSBIXG00005029554) #20	HOXB5 (ENSBIXG00005029559) #21	HOXB4 (ENSBIXG00005029577) #22	HOXB3 (ENSBIXG00005029591) #23	HOXB2 (ENSBIXG00005029607) #24	HOXB1 (ENSBIXG00005029618) #25	ENSBIXG00005029636 #26	SKAP1 (ENSBIXG00005029657) #28	SNX11 (ENSBIXG00005029679) #29	CBX1 (ENSBIXG00005029691) #30	NFE2L1 (ENSBIXG00005029748) #31	COPZ2 (ENSBIXG00005029862) #32	CDK5RAP3 (ENSBIXG00005029886) #33	PRR15L (ENSBIXG00005029905) #34	PNPO (ENSBIXG00005029918) #35	ENSBIXG00005029934 #36	SP6 (ENSBIXG00005029948) #37	SCRN2 (ENSBIXG00005029976)
Cow	MODERN SPECIES	10	GNGT2 (ENSBTAG00000047325)	B4GALNT2 (ENSBTAG00000009864) #7	IGF2BP1 (ENSBTAG00000011736) #8	GIP (ENSBTAG00000005045) #9	SNF8 (ENSBTAG00000018803) #10	UBE2Z (ENSBTAG00000018802) #12	ATP5MC1 (ENSBTAG00000018339) #13	CALCOCO2 (ENSBTAG00000007935) #14	TTLL6 (ENSBTAG00000009332) #15	HOXB13 (ENSBTAG00000014663) #16	HOXB9 (ENSBTAG00000054623) #17	HOXB8 (ENSBTAG00000054162) #18	HOXB7 (ENSBTAG00000005546) #19	HOXB6 (ENSBTAG00000050006) #20	HOXB5 (ENSBTAG00000045835) #21	HOXB4 (ENSBTAG00000039599) #22	HOXB3 (ENSBTAG00000021427) #23	HOXB2 (ENSBTAG00000009979) #24	HOXB1 (ENSBTAG00000007603) #25	SKAP1 (ENSBTAG00000000641) #28	SNX11 (ENSBTAG00000020321) #29	CBX1 (ENSBTAG00000002949) #30	NFE2L1 (ENSBTAG00000013653) #31	COPZ2 (ENSBTAG00000039954) #32	CDK5RAP3 (ENSBTAG00000014202) #33	PRR15L (ENSBTAG00000012249) #34	PNPO (ENSBTAG00000012259) #35	SP2 (ENSBTAG00000013740) #36	SP6 (ENSBTAG00000001825) #37	SCRN2 (ENSBTAG00000001828)	LRRC46 (ENSBTAG00000001830)
Bos_a	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000154688.b.k.a #26	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.i #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590.e.b #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Wild yak	MODERN SPECIES	319	GNGT2 (ENSBMUG00000000436)	B4GALNT2 (ENSBMUG00000000477) #7	IGF2BP1 (ENSBMUG00000000549) #8	GIP (ENSBMUG00000000594) #9	SNF8 (ENSBMUG00000000607) #10	UBE2Z (ENSBMUG00000000624) #12	ENSBMUG00000000644 #13	CALCOCO2 (ENSBMUG00000000720) #14	ENSBMUG00000000753 #15	HOXB13 (ENSBMUG00000000770) #16	HOXB9 (ENSBMUG00000000804) #17	HOXB8 (ENSBMUG00000000824) #18	HOXB7 (ENSBMUG00000000832) #19	HOXB6 (ENSBMUG00000000839) #20	HOXB5 (ENSBMUG00000000849) #21	HOXB4 (ENSBMUG00000000867) #22	HOXB3 (ENSBMUG00000000876) #23	HOXB2 (ENSBMUG00000000885) #24	HOXB1 (ENSBMUG00000000891) #25	ENSBMUG00000000901 #26	SKAP1 (ENSBMUG00000000925) #28	SNX11 (ENSBMUG00000000953) #29	CBX1 (ENSBMUG00000000974) #30	NFE2L1 (ENSBMUG00000001054) #31	COPZ2 (ENSBMUG00000001081) #32	CDK5RAP3 (ENSBMUG00000001110) #33	ENSBMUG00000001125 #34	PNPO (ENSBMUG00000001160) #35	SP2 (ENSBMUG00000001179) #36
Domestic yak	MODERN SPECIES	10	PHOSPHO1 (ENSBGRG00000023170)	ABI3 (ENSBGRG00000022961)	B4GALNT2 (ENSBGRG00000022672) #7	IGF2BP1 (ENSBGRG00000022442) #8	GIP (ENSBGRG00000022397) #9	SNF8 (ENSBGRG00000022296) #10	UBE2Z (ENSBGRG00000022223) #12	ENSBGRG00000022156 #13	CALCOCO2 (ENSBGRG00000021810) #14	TTLL6 (ENSBGRG00000021744) #15	HOXB13 (ENSBGRG00000021718) #16	HOXB9 (ENSBGRG00000021683) #17	HOXB8 (ENSBGRG00000021618) #18	HOXB6 (ENSBGRG00000021579) #20	HOXB5 (ENSBGRG00000021555) #21	HOXB4 (ENSBGRG00000021501) #22	HOXB3 (ENSBGRG00000021464) #23	HOXB2 (ENSBGRG00000021425) #24	HOXB1 (ENSBGRG00000021404) #25	SKAP1 (ENSBGRG00000021202) #28	SNX11 (ENSBGRG00000021141) #29	CBX1 (ENSBGRG00000021062) #30	NFE2L1 (ENSBGRG00000020783) #31	COPZ2 (ENSBGRG00000020574) #32	CDK5RAP3 (ENSBGRG00000020283) #33	ENSBGRG00000020194 #34	PNPO (ENSBGRG00000019898) #35	ENSBGRG00000019774 #36	SP6 (ENSBGRG00000019744) #37	SCRN2 (ENSBGRG00000019672)	LRRC46 (ENSBGRG00000019490)
Siberian musk deer	MODERN SPECIES	1210	B4GALNT2 (ENSMMSG00000024496) #7	ENSMMSG00000024500	IGF2BP1 (ENSMMSG00000024501) #8	GIP (ENSMMSG00000024503) #9	ENSMMSG00000024504 #10	UBE2Z (ENSMMSG00000024505) #12	ATP5MC1 (ENSMMSG00000024506)	CALCOCO2 (ENSMMSG00000024509) #14	TTLL6 (ENSMMSG00000024514) #15	HOXB13 (ENSMMSG00000024516) #16	HOXB9 (ENSMMSG00000024520) #17	HOXB8 (ENSMMSG00000024522) #18	HOXB7 (ENSMMSG00000024523) #19	HOXB6 (ENSMMSG00000024525) #20	HOXB5 (ENSMMSG00000024526) #21	HOXB4 (ENSMMSG00000024528) #22	ENSMMSG00000024530	HOXB3 (ENSMMSG00000024531) #23	HOXB2 (ENSMMSG00000024532) #24	HOXB1 (ENSMMSG00000024533) #25	ENSMMSG00000024535 #26	SKAP1 (ENSMMSG00000024536) #28	SNX11 (ENSMMSG00000024538) #29	CBX1 (ENSMMSG00000024540) #30	NFE2L1 (ENSMMSG00000024541) #31	COPZ2 (ENSMMSG00000024546) #32	CDK5RAP3 (ENSMMSG00000024548) #33	PRR15L (ENSMMSG00000024549) #34	PNPO (ENSMMSG00000024550) #35	SP2 (ENSMMSG00000024551) #36	SP6 (ENSMMSG00000018224) #37
Yarkand deer	MODERN SPECIES	28	B4GALNT2 (ENSCHYG00000004351) #7	IGF2BP1 (ENSCHYG00000004387) #8	GIP (ENSCHYG00000004425) #9	SNF8 (ENSCHYG00000004443) #10	UBE2Z (ENSCHYG00000004456) #12	ENSCHYG00000004476 #13	ENSCHYG00000004493	ENSCHYG00000004521 #14	TTLL6 (ENSCHYG00000004571) #15	HOXB13 (ENSCHYG00000004599) #16	HOXB9 (ENSCHYG00000004623) #17	HOXB8 (ENSCHYG00000004637) #18	HOXB7 (ENSCHYG00000004645) #19	HOXB6 (ENSCHYG00000004651) #20	HOXB5 (ENSCHYG00000004658) #21	HOXB4 (ENSCHYG00000004668) #22	HOXB3 (ENSCHYG00000004670) #23	HOXB2 (ENSCHYG00000004674) #24	HOXB1 (ENSCHYG00000004684) #25	SKAP1 (ENSCHYG00000004692) #28	ENSCHYG00000004720	SNX11 (ENSCHYG00000004737) #29	CBX1 (ENSCHYG00000004750) #30	NFE2L1 (ENSCHYG00000004781) #31	COPZ2 (ENSCHYG00000004829) #32	ENSCHYG00000004851	CDK5RAP3 (ENSCHYG00000000101) #33	PRR15L (ENSCHYG00000000125) #34	PNPO (ENSCHYG00000000157) #35	SP2 (ENSCHYG00000000198) #36	SP6 (ENSCHYG00000000221) #37
Cetacea	ANCESTRAL SPECIES	5	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.g #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Odontoceti	ANCESTRAL SPECIES	16	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.g #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.g #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.g #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Monodontidae	ANCESTRAL SPECIES	16	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.g #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Beluga whale	MODERN SPECIES	26	GNGT2 (ENSDLEG00000004944)	B4GALNT2 (ENSDLEG00000004906) #7	IGF2BP1 (ENSDLEG00000004887) #8	GIP (ENSDLEG00000004882) #9	SNF8 (ENSDLEG00000004876) #10	UBE2Z (ENSDLEG00000004871) #12	ATP5G1 (ENSDLEG00000004867) #13	CALCOCO2 (ENSDLEG00000004861) #14	TTLL6 (ENSDLEG00000004850) #15	HOXB13 (ENSDLEG00000004844) #16	HOXB9 (ENSDLEG00000004838) #17	HOXB8 (ENSDLEG00000004837) #18	HOXB7 (ENSDLEG00000004834) #19	HOXB6 (ENSDLEG00000004829) #20	HOXB5 (ENSDLEG00000004826) #21	HOXB4 (ENSDLEG00000004820) #22	HOXB3 (ENSDLEG00000004817) #23	HOXB2 (ENSDLEG00000004813) #24	HOXB1 (ENSDLEG00000004807) #25	SKAP1 (ENSDLEG00000004779) #28	SNX11 (ENSDLEG00000004765) #29	CBX1 (ENSDLEG00000004754) ##30	NFE2L1 (ENSDLEG00000004744) #31	ENSDLEG00000004734	COPZ2 (ENSDLEG00000004721) #32	CDK5RAP3 (ENSDLEG00000004709) #33	PRR15L (ENSDLEG00000004704) #34	PNPO (ENSDLEG00000004701) #35	SP2 (ENSDLEG00000004697) #36	SP6 (ENSDLEG00000004694) #37	SCRN2 (ENSDLEG00000004688)
Narwhal	MODERN SPECIES	316	GNGT2 (ENSMMNG00015022051)	B4GALNT2 (ENSMMNG00015022052) #7	IGF2BP1 (ENSMMNG00015022053) #8	GIP (ENSMMNG00015022055) #9	ENSMMNG00015022056 #10	UBE2Z (ENSMMNG00015022057) #12	ENSMMNG00015022058 #13	CALCOCO2 (ENSMMNG00015022060) #14	TTLL6 (ENSMMNG00015015987) #15	HOXB13 (ENSMMNG00015016080) #16	HOXB9 (ENSMMNG00015016160) #17	HOXB8 (ENSMMNG00015016175) #18	HOXB7 (ENSMMNG00015016197) #19	HOXB6 (ENSMMNG00015016215) #20	HOXB5 (ENSMMNG00015016235) #21	HOXB4 (ENSMMNG00015016252) #22	HOXB3 (ENSMMNG00015016287) #23	HOXB2 (ENSMMNG00015016324) #24	HOXB1 (ENSMMNG00015016356) #25	SKAP1 (ENSMMNG00015016386) #28	SNX11 (ENSMMNG00015016452) #29	CBX1 (ENSMMNG00015016582) #30	NFE2L1 (ENSMMNG00015016634) #31	COPZ2 (ENSMMNG00015016743) #32	CDK5RAP3 (ENSMMNG00015016820) #33	PRR15L (ENSMMNG00015016868) #34	PNPO (ENSMMNG00015016895) #35	SP2 (ENSMMNG00015016948) #36	SP6 (ENSMMNG00015016969) #37	SCRN2 (ENSMMNG00015016985)	LRRC46 (ENSMMNG00015017038)
Vaquita	MODERN SPECIES	12	B4GALNT2 (ENSPSNG00000015839) #7	ENSPSNG00000016103	IGF2BP1 (ENSPSNG00000016168) #8	GIP (ENSPSNG00000016483) #9	SNF8 (ENSPSNG00000016533) #10	UBE2Z (ENSPSNG00000016576) #12	ENSPSNG00000016635 #13	CALCOCO2 (ENSPSNG00000016749) #14	TTLL6 (ENSPSNG00000017015) #15	HOXB13 (ENSPSNG00000017233) #16	HOXB9 (ENSPSNG00000017398) #17	HOXB8 (ENSPSNG00000017436) #18	HOXB7 (ENSPSNG00000017482) #19	HOXB6 (ENSPSNG00000017525) #20	HOXB5 (ENSPSNG00000017559) #21	HOXB4 (ENSPSNG00000017604) #22	HOXB3 (ENSPSNG00000017636) #23	HOXB2 (ENSPSNG00000017708) #24	HOXB1 (ENSPSNG00000017728) #25	SKAP1 (ENSPSNG00000017760) #28	SNX11 (ENSPSNG00000017889) #29	ENSPSNG00000017984 #30	NFE2L1 (ENSPSNG00000018052) #31	COPZ2 (ENSPSNG00000018262) #32	CDK5RAP3 (ENSPSNG00000018321) #33	PRR15L (ENSPSNG00000018399) #34	PNPO (ENSPSNG00000018423) #35	SP2 (ENSPSNG00000018528) #36	SP6 (ENSPSNG00000018568) #37	SCRN2 (ENSPSNG00000018588)	LRRC46 (ENSPSNG00000018676)
Dolphin	MODERN SPECIES	4465											HOXB9 (ENSTTRG00000012262) #17	HOXB8 (ENSTTRG00000012260) #18	ENSTTRG00000012257	HOXB6 (ENSTTRG00000012252) #20	HOXB5 (ENSTTRG00000012251) #21	HOXB4 (ENSTTRG00000012249) #22	HOXB3 (ENSTTRG00000012246) #23	HOXB2 (ENSTTRG00000012244) #24	HOXB1 (ENSTTRG00000012240) #25
Sperm whale	MODERN SPECIES	5	ZNF652 (ENSPCTG00005004307)	B4GALNT2 (ENSPCTG00005004337) #7	IGF2BP1 (ENSPCTG00005004404) #8	GIP (ENSPCTG00005004443) #9	ENSPCTG00005004464	SNF8 (ENSPCTG00005004481) #10	ATP5MC1 (ENSPCTG00005004516) #12	CALCOCO2 (ENSPCTG00005004611) #14	TTLL6 (ENSPCTG00005004739) #15	HOXB13 (ENSPCTG00005004788) #16	HOXB9 (ENSPCTG00005004847) #17	HOXB8 (ENSPCTG00005004864) #18	HOXB7 (ENSPCTG00005004882) #19	HOXB6 (ENSPCTG00005004887) #20	HOXB5 (ENSPCTG00005004905) #21	HOXB4 (ENSPCTG00005004920) #22	HOXB3 (ENSPCTG00005004930) #23	HOXB2 (ENSPCTG00005004951) #24	HOXB1 (ENSPCTG00005004966) #25	SKAP1 (ENSPCTG00005004985) #28	CBX1 (ENSPCTG00005005034) #30	ENSPCTG00005005083 #36	TBX21 (ENSPCTG00005005105)	TBKBP1 (ENSPCTG00005005144)	KPNB1 (ENSPCTG00005005195)	NPEPPS (ENSPCTG00005005245)	GPR179 (ENSPCTG00005005545)	SOCS7 (ENSPCTG00005005634)	ARHGAP23 (ENSPCTG00005005753)	SRCIN1 (ENSPCTG00005005823)	ENSPCTG00005006189
Blue whale	MODERN SPECIES	12	B4GALNT2 (ENSBMSG00010016748) #7	IGF2BP1 (ENSBMSG00010016894) #8	GIP (ENSBMSG00010017026) #9	SNF8 (ENSBMSG00010017067) #10	UBE2Z (ENSBMSG00010017102) #12	ATP5MC1 (ENSBMSG00010017142)	ENSBMSG00010017179	CALCOCO2 (ENSBMSG00010017255) #14	TTLL6 (ENSBMSG00010017444) #15	HOXB13 (ENSBMSG00010017547) #16	HOXB9 (ENSBMSG00010017655) #17	HOXB8 (ENSBMSG00010017685) #18	HOXB7 (ENSBMSG00010017724) #19	HOXB6 (ENSBMSG00010017746) #20	HOXB5 (ENSBMSG00010017772) #21	HOXB4 (ENSBMSG00010017814) #22	HOXB3 (ENSBMSG00010017838) #23	HOXB2 (ENSBMSG00010017860) #24	HOXB1 (ENSBMSG00010017892) #25	SKAP1 (ENSBMSG00010017921) #28	SNX11 (ENSBMSG00010018006) #29	CBX1 (ENSBMSG00010018099) #30	NFE2L1 (ENSBMSG00010018163) #31	COPZ2 (ENSBMSG00010018306) #32	CDK5RAP3 (ENSBMSG00010018481) #33	PRR15L (ENSBMSG00010018513) #34	PNPO (ENSBMSG00010018544) #35	SP2 (ENSBMSG00010018607) #36	SP6 (ENSBMSG00010018628) #37	ENSBMSG00010018650	ENSBMSG00010018673
Camelidae	ANCESTRAL SPECIES	60	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.a.a ##30	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Arabian camel	MODERN SPECIES	7	ENSCDRG00005016619	B4GALNT2 (ENSCDRG00005016644) #7	IGF2BP1 (ENSCDRG00005016778) #8	GIP (ENSCDRG00005016991) #9	ENSCDRG00005017040 #10	ENSCDRG00005017061	UBE2Z (ENSCDRG00005017075) #12	ENSCDRG00005017142 #13	CALCOCO2 (ENSCDRG00005017213) #14	TTLL6 (ENSCDRG00005017585) #15	HOXB13 (ENSCDRG00005017741) #16	HOXB9 (ENSCDRG00005017862) #17	HOXB7 (ENSCDRG00005018007) #19	HOXB6 (ENSCDRG00005018029) #20	HOXB5 (ENSCDRG00005018055) #21	HOXB4 (ENSCDRG00005018079) #22	HOXB3 (ENSCDRG00005018104) #23	HOXB2 (ENSCDRG00005018121) #24	HOXB1 (ENSCDRG00005018147) #25	SKAP1 (ENSCDRG00005018166) #28	SNX11 (ENSCDRG00005018232) #29	CBX1 (ENSCDRG00005018330) ##30	NFE2L1 (ENSCDRG00005018357) #31	ENSCDRG00005018515	COPZ2 (ENSCDRG00005018538) #32	CDK5RAP3 (ENSCDRG00005018564) #33	PRR15L (ENSCDRG00005018636) #34	SP2 (ENSCDRG00005018756) #36	SP6 (ENSCDRG00005018791) #37	SCRN2 (ENSCDRG00005018805)	LRRC46 (ENSCDRG00005018865)
Suina	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Pig	MODERN SPECIES	3	ENSSSCG00000033286	ENSSSCG00000030269 #7	IGF2BP1 (ENSSSCG00000023128) #8	GIP (ENSSSCG00000026330) #9	SNF8 (ENSSSCG00000021461) #10	UBE2Z (ENSSSCG00000025638) #12	ATP5MC1 (ENSSSCG00000017544)	CALCOCO2 (ENSSSCG00000017543) #14	TTLL6 (ENSSSCG00000017542) #15	HOXB13 (ENSSSCG00000017541) #16	HOXB9 (ENSSSCG00000061856) #17	HOXB8 (ENSSSCG00000017537) #18	HOXB7 (ENSSSCG00000017538) #19	HOXB6 (ENSSSCG00000017539) #20	HOXB5 (ENSSSCG00000017540) #21	HOXB4 (ENSSSCG00000017535) #22	HOXB3 (ENSSSCG00000017534) #23	HOXB2 (ENSSSCG00000017533) #24	HOXB1 (ENSSSCG00000017532) #25	SKAP1 (ENSSSCG00000017527) #28	SNX11 (ENSSSCG00000017528) #29	CBX1 (ENSSSCG00000017529) #30	NFE2L1 (ENSSSCG00000017525) #31	COPZ2 (ENSSSCG00000017526) #32	CDK5RAP3 (ENSSSCG00000017524) #33	PRR15L (ENSSSCG00000054179) #34	PNPO (ENSSSCG00000032782) #35	SP2 (ENSSSCG00000017516) #36	SP6 (ENSSSCG00000017522) #37	SCRN2 (ENSSSCG00000017521)	LRRC46 (ENSSSCG00000017520)
Chacoan peccary	MODERN SPECIES	145	GNGT2 (ENSCWAG00000022039)	ENSCWAG00000022041	IGF2BP1 (ENSCWAG00000022044) #8	GIP (ENSCWAG00000022046) #9	SNF8 (ENSCWAG00000022048) #10	UBE2Z (ENSCWAG00000022050) #12	ATP5MC1 (ENSCWAG00000022052)	CALCOCO2 (ENSCWAG00000022056) #14	TTLL6 (ENSCWAG00000022059) #15	HOXB13 (ENSCWAG00000022063) #16	HOXB9 (ENSCWAG00000022065) #17	HOXB8 (ENSCWAG00000022066) #18	HOXB7 (ENSCWAG00000022067) #19	HOXB6 (ENSCWAG00000022069) #20	HOXB5 (ENSCWAG00000022071) #21	HOXB4 (ENSCWAG00000022074) #22	HOXB3 (ENSCWAG00000022077) #23	HOXB2 (ENSCWAG00000022078) #24	HOXB1 (ENSCWAG00000022080) #25	SKAP1 (ENSCWAG00000000046) #28	SNX11 (ENSCWAG00000000070) #29	CBX1 (ENSCWAG00000000121) #30	NFE2L1 (ENSCWAG00000000185) #31	COPZ2 (ENSCWAG00000000341) #32	CDK5RAP3 (ENSCWAG00000000377) #33	PRR15L (ENSCWAG00000000410) #34	PNPO (ENSCWAG00000000427) #35	SP2 (ENSCWAG00000000474) #36	SP6 (ENSCWAG00000000502) #37	SCRN2 (ENSCWAG00000000520)	LRRC46 (ENSCWAG00000000570)
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Chiroptera	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Microchiroptera	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Greater horseshoe bat	MODERN SPECIES	13	ENSRFEG00010021705	IGF2BP1 (ENSRFEG00010021720) #8	GIP (ENSRFEG00010021740) #9	SNF8 (ENSRFEG00010021745) #10	UBE2Z (ENSRFEG00010021755) #12	ENSRFEG00010021766 #13	CALCOCO2 (ENSRFEG00010021784) #14	ENSRFEG00010021798	TTLL6 (ENSRFEG00010021801) #15	HOXB13 (ENSRFEG00010021808) #16	HOXB9 (ENSRFEG00010021814) #17	HOXB8 (ENSRFEG00010021818) #18	HOXB7 (ENSRFEG00010021823) #19	HOXB6 (ENSRFEG00010021831) #20	HOXB5 (ENSRFEG00010021836) #21	HOXB4 (ENSRFEG00010021844) #22	ENSRFEG00010021849	HOXB3 (ENSRFEG00010021853) #23	HOXB2 (ENSRFEG00010021859) #24	HOXB1 (ENSRFEG00010021864) #25	SKAP1 (ENSRFEG00010021866) #28	SNX11 (ENSRFEG00010021879) #29	CBX1 (ENSRFEG00010021893) #30	NFE2L1 (ENSRFEG00010021900) #31	COPZ2 (ENSRFEG00010021918) #32	CDK5RAP3 (ENSRFEG00010021928) #33	PRR15L (ENSRFEG00010021936) #34	PNPO (ENSRFEG00010021942) #35	SP2 (ENSRFEG00010021950) #36	SP6 (ENSRFEG00010021957) #37	SCRN2 (ENSRFEG00010021961)
Megabat	MODERN SPECIES	334									HOXB13 (ENSPVAG00000015531) #16	ENSPVAG00000015530	HOXB8 (ENSPVAG00000015529) #18	HOXB7 (ENSPVAG00000015528) #19	ENSPVAG00000015526	HOXB6 (ENSPVAG00000015525) #20	HOXB5 (ENSPVAG00000015524) #21	HOXB4 (ENSPVAG00000015523) #22	HOXB3 (ENSPVAG00000015522) #23	ENSPVAG00000015521 #24	HOXB1 (ENSPVAG00000015520) #25	SKAP1 (ENSPVAG00000015519) #28	SNX11 (ENSPVAG00000015518) #29
Equus	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Horse	MODERN SPECIES	2	GNGT2 (ENSECAG00000016054)	B4GALNT2 (ENSECAG00000013354) #7	IGF2BP1 (ENSECAG00000009723) #8	GIP (ENSECAG00000008172) #9	ENSECAG00000046431	SNF8 (ENSECAG00000022092) #10	UBE2Z (ENSECAG00000021160) #12	ATP5MC1 (ENSECAG00000019908) #13	CALCOCO2 (ENSECAG00000015498) #14	ENSECAG00000059603 #15	TTLL6 (ENSECAG00000014417) #15	HOXB13 (ENSECAG00000013619) #16	HOXB9 (ENSECAG00000036001) #17	HOXB8 (ENSECAG00000034473) #19	HOXB5 (ENSECAG00000012439) #21	HOXB4 (ENSECAG00000028576) #22	HOXB3 (ENSECAG00000002707) #23	HOXB2 (ENSECAG00000012423) #24	HOXB1 (ENSECAG00000011628) #25	SKAP1 (ENSECAG00000010544) #28	SNX11 (ENSECAG00000008117) #29	CBX1 (ENSECAG00000008048) #30	NFE2L1 (ENSECAG00000007777) #31	COPZ2 (ENSECAG00000024471) #32	CDK5RAP3 (ENSECAG00000018688) #33	PRR15L (ENSECAG00000002658) #34	PNPO (ENSECAG00000014995) #35	SP2 (ENSECAG00000012859) #36	SP6 (ENSECAG00000012853) #37	SCRN2 (ENSECAG00000009826)	LRRC46 (ENSECAG00000007543)
Carnivora	ANCESTRAL SPECIES	9	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Felidae	ANCESTRAL SPECIES	8	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.f.a #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000013771.p	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Panthera	ANCESTRAL SPECIES	14	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.f.a #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000013771.p	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00940000154534.a #34	ENSGT00390000000713 #33	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Tiger	MODERN SPECIES	230	PHB1 (ENSPTIG00000008349)	ZNF652 (ENSPTIG00000010615)	ABI3 (ENSPTIG00000011177)	GNGT2 (ENSPTIG00000011802)	B4GALNT2 (ENSPTIG00000012803) #7	IGF2BP1 (ENSPTIG00000013291) #8	GIP (ENSPTIG00000016604) #9	SNF8 (ENSPTIG00000017017) #10	UBE2Z (ENSPTIG00000017872) #12	ENSPTIG00000018508 #13	CALCOCO2 (ENSPTIG00000020855) #14	TTLL6 (ENSPTIG00000010570) #15	ENSPTIG00000013326 #16	HOXB7 (ENSPTIG00000014471) #19	HOXB5 (ENSPTIG00000014877) #21	HOXB4 (ENSPTIG00000014995) #22	HOXB2 (ENSPTIG00000015306) #24	HOXB1 (ENSPTIG00000015694) #25	SKAP1 (ENSPTIG00000016493) #28	SNX11 (ENSPTIG00000018316) #29	CBX1 (ENSPTIG00000020896) ##30	NFE2L1 (ENSPTIG00000021715) #31	ENSPTIG00000007047	COPZ2 (ENSPTIG00000007508) #32	CDK5RAP3 (ENSPTIG00000009086) #33	PNPO (ENSPTIG00000012157) #35	SP2 (ENSPTIG00000014873) #36	SCRN2 (ENSPTIG00000016232)	LRRC46 (ENSPTIG00000018466)	MRPL10 (ENSPTIG00000018968)	ENSPTIG00000019388
Panthera_a	ANCESTRAL SPECIES	13	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.f.a #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000013771.p	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00940000154534.a #34	ENSGT00390000000713 #33	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
leopard	MODERN SPECIES	67	GNGT2 (ENSPPRG00000009442)	B4GALNT2 (ENSPPRG00000008636) #7	IGF2BP1 (ENSPPRG00000008067) #8	GIP (ENSPPRG00000007119) #9	ENSPPRG00000007008 #10	UBE2Z (ENSPPRG00000005626) #12	ENSPPRG00000005588 #13	CALCOCO2 (ENSPPRG00000004550) #14	TTLL6 (ENSPPRG00000003004) #15	HOXB13 (ENSPPRG00000001633) #16	HOXB9 (ENSPPRG00000001578) #17	HOXB8 (ENSPPRG00000001156) #18	HOXB7 (ENSPPRG00000000666) #19	HOXB6 (ENSPPRG00000000532) #20	HOXB5 (ENSPPRG00000000333) #21	HOXB4 (ENSPPRG00000000220) #22	HOXB3 (ENSPPRG00000022415) #23	HOXB2 (ENSPPRG00000020926) #24	HOXB1 (ENSPPRG00000017656) #25	ENSPPRG00000017115	ENSPPRG00000016613	SKAP1 (ENSPPRG00000015336) #28	SNX11 (ENSPPRG00000012061) #29	CBX1 (ENSPPRG00000009475) #30	NFE2L1 (ENSPPRG00000009101) #31	COPZ2 (ENSPPRG00000006801) #32	CDK5RAP3 (ENSPPRG00000006376) #33	PNPO (ENSPPRG00000005037) #35	SP2 (ENSPPRG00000003332) #36	SP6 (ENSPPRG00000016089) #37	SCRN2 (ENSPPRG00000002730)
lion	MODERN SPECIES	14	B4GALNT2 (ENSPLOG00000021030) #7	IGF2BP1 (ENSPLOG00000021207) #8	GIP (ENSPLOG00000021311) #9	SNF8 (ENSPLOG00000021370) #10	UBE2Z (ENSPLOG00000021399) #12	ENSPLOG00000021422 #13	CALCOCO2 (ENSPLOG00000021469) #14	TTLL6 (ENSPLOG00000021506) #15	HOXB13 (ENSPLOG00000021590) #16	ENSPLOG00000021606	HOXB9 (ENSPLOG00000021630) #17	HOXB8 (ENSPLOG00000021645) #18	HOXB7 (ENSPLOG00000021659) #19	HOXB6 (ENSPLOG00000021669) #20	HOXB5 (ENSPLOG00000021683) #21	HOXB4 (ENSPLOG00000021697) #22	HOXB3 (ENSPLOG00000021711) #23	HOXB2 (ENSPLOG00000021733) #24	HOXB1 (ENSPLOG00000021742) #25	ENSPLOG00000021761	SKAP1 (ENSPLOG00000021790) #28	SNX11 (ENSPLOG00000021872) #29	CBX1 (ENSPLOG00000021907) #30	NFE2L1 (ENSPLOG00000021931) #31	COPZ2 (ENSPLOG00000021972) #32	CDK5RAP3 (ENSPLOG00000022033) #33	PRR15L (ENSPLOG00000022093) #34	SP2 (ENSPLOG00000022101) #36	SP6 (ENSPLOG00000022115) #37	SCRN2 (ENSPLOG00000022130)	LRRC46 (ENSPLOG00000005433)
Cat	MODERN SPECIES	245	GNGT2 (ENSFCAG00000039268)	B4GALNT2 (ENSFCAG00000018523) #7	IGF2BP1 (ENSFCAG00000002454) #8	GIP (ENSFCAG00000008946) #9	SNF8 (ENSFCAG00000008944) #10	UBE2Z (ENSFCAG00000045462) #12	ENSFCAG00000002344 #13	CALCOCO2 (ENSFCAG00000010622) #14	TTLL6 (ENSFCAG00000010617) #15	HOXB13 (ENSFCAG00000002120) #16	HOXB9 (ENSFCAG00000035234) #17	HOXB8 (ENSFCAG00000036979) #18	HOXB7 (ENSFCAG00000002118) #19	HOXB6 (ENSFCAG00000034768) #20	HOXB5 (ENSFCAG00000039068) #21	HOXB4 (ENSFCAG00000051422) #22	HOXB3 (ENSFCAG00000006408) #23	HOXB2 (ENSFCAG00000045039) #24	HOXB1 (ENSFCAG00000028151) #25	ENSFCAG00000034133	SKAP1 (ENSFCAG00000004784) #28	SNX11 (ENSFCAG00000009371) #29	CBX1 (ENSFCAG00000006056) ##30	NFE2L1 (ENSFCAG00000009369) #31	COPZ2 (ENSFCAG00000034233) #32	CDK5RAP3 (ENSFCAG00000009367) #33	PRR15L (ENSFCAG00000009366) #34	PNPO (ENSFCAG00000001300) #35	SP2 (ENSFCAG00000009365) #36	SP6 (ENSFCAG00000009363) #37	SCRN2 (ENSFCAG00000009362)
Caniformia	ANCESTRAL SPECIES	6	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Ursidae	ANCESTRAL SPECIES	18	ENSGT01100000263525.b.a.b	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Giant Panda	MODERN SPECIES	4	B4GALNT2 (ENSAMEG00000005108) #7	IGF2BP1 (ENSAMEG00000005087) #8	GIP (ENSAMEG00000005081) #9	SNF8 (ENSAMEG00000005062) #10	UBE2Z (ENSAMEG00000005049) #12	ATP5MC1 (ENSAMEG00000005038) #13	CALCOCO2 (ENSAMEG00000005015) #14	ENSAMEG00000005000 #15	HOXB13 (ENSAMEG00000026873) #16	ENSAMEG00000026258	HOXB9 (ENSAMEG00000024921) #17	ENSAMEG00000004982 #18	HOXB7 (ENSAMEG00000004977) #19	HOXB6 (ENSAMEG00000004971) #20	HOXB5 (ENSAMEG00000004967) #21	HOXB4 (ENSAMEG00000028329) #22	HOXB3 (ENSAMEG00000027375) #23	HOXB2 (ENSAMEG00000030987) #24	HOXB1 (ENSAMEG00000004935) #25	SKAP1 (ENSAMEG00000004919) #28	SNX11 (ENSAMEG00000004898) #29	CBX1 (ENSAMEG00000004890) #30	NFE2L1 (ENSAMEG00000004881) #31	COPZ2 (ENSAMEG00000004850) #32	ENSAMEG00000030152	CDK5RAP3 (ENSAMEG00000004818) #33	PRR15L (ENSAMEG00000025744) #34	PNPO (ENSAMEG00000004786) #35	SP2 (ENSAMEG00000004772) #36	SCRN2 (ENSAMEG00000004751)	LRRC46 (ENSAMEG00000004734)
Ursus	ANCESTRAL SPECIES	67	ENSGT01100000263525.b.a.b	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
American black bear	MODERN SPECIES	3149										HOXB13 (ENSUAMG00000021914) #16	HOXB9 (ENSUAMG00000021910) #17	HOXB8 (ENSUAMG00000021909) #18	HOXB7 (ENSUAMG00000021908) #19	HOXB6 (ENSUAMG00000021905) #20	HOXB5 (ENSUAMG00000021904) #21	HOXB4 (ENSUAMG00000021902) #22
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00950000185410	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
American mink	MODERN SPECIES	92	B4GALNT2 (ENSNVIG00000006432) #7	IGF2BP1 (ENSNVIG00000006377) #8	GIP (ENSNVIG00000006361) #9	ENSNVIG00000006352 #10	ENSNVIG00000006339	UBE2Z (ENSNVIG00000006316) #12	ENSNVIG00000006295 #13	CALCOCO2 (ENSNVIG00000006167) #14	TTLL6 (ENSNVIG00000006132) #15	HOXB13 (ENSNVIG00000006117) #16	HOXB9 (ENSNVIG00000006082) #17	HOXB8 (ENSNVIG00000006066) #18	HOXB7 (ENSNVIG00000006060) #19	HOXB6 (ENSNVIG00000006053) #20	HOXB5 (ENSNVIG00000006049) #21	HOXB4 (ENSNVIG00000006040) #22	HOXB3 (ENSNVIG00000006032) #23	HOXB2 (ENSNVIG00000006024) #24	HOXB1 (ENSNVIG00000006017) #25	ENSNVIG00000006009	SKAP1 (ENSNVIG00000005974) #28	SNX11 (ENSNVIG00000005959) #29	CBX1 (ENSNVIG00000005946) #30	NFE2L1 (ENSNVIG00000005857) #31	ENSNVIG00000005842	COPZ2 (ENSNVIG00000005837) #32	CDK5RAP3 (ENSNVIG00000005742) #33	PR15L (ENSNVIG00000005731) #34	PNPO (ENSNVIG00000005692) #35	SP2 (ENSNVIG00000005673) #36	SP6 (ENSNVIG00000005667) #37
Ferret	MODERN SPECIES	270	ABI3 (ENSMPUG00000015374)	B4GALNT2 (ENSMPUG00000015373) #7	IGF2BP1 (ENSMPUG00000015358) #8	GIP (ENSMPUG00000015357) #9	SNF8 (ENSMPUG00000015356) #10	UBE2Z (ENSMPUG00000015342) #12	ENSMPUG00000015341 #13	CALCOCO2 (ENSMPUG00000015338) #14	TTLL6 (ENSMPUG00000015335) #15	HOXB13 (ENSMPUG00000015332) #16	HOXB9 (ENSMPUG00000015330) #17	HOXB8 (ENSMPUG00000015329) #18	HOXB7 (ENSMPUG00000015328) #19	HOXB6 (ENSMPUG00000015322) #20	HOXB5 (ENSMPUG00000015316) #21	HOXB4 (ENSMPUG00000015310) #22	HOXB2 (ENSMPUG00000015309) #24	HOXB1 (ENSMPUG00000015307) #25	SKAP1 (ENSMPUG00000015305) #28	SNX11 (ENSMPUG00000015303) #29	CBX1 (ENSMPUG00000015302) ##30	NFE2L1 (ENSMPUG00000015301) #31	COPZ2 (ENSMPUG00000015292) #32	CDK5RAP3 (ENSMPUG00000015291) #33	PRR15L (ENSMPUG00000020087) #34	PNPO (ENSMPUG00000015290) #35	SP2 (ENSMPUG00000015289) #36	SP6 (ENSMPUG00000020086) #37	SCRN2 (ENSMPUG00000015288)	LRRC46 (ENSMPUG00000015287)	MRPL10 (ENSMPUG00000015278)
Canidae	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.c #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Red fox	MODERN SPECIES	20	B4GALNT2 (ENSVVUG00000003458) #7	ENSVVUG00000003456	IGF2BP1 (ENSVVUG00000003451) #8	GIP (ENSVVUG00000003440) #9	SNF8 (ENSVVUG00000003434) #10	UBE2Z (ENSVVUG00000003424) #12	ATP5MC1 (ENSVVUG00000003411) #13	CALCOCO2 (ENSVVUG00000003399) #14	TTLL6 (ENSVVUG00000003393) #15	HOXB13 (ENSVVUG00000003382) #16	HOXB9 (ENSVVUG00000003367) #17	HOXB8 (ENSVVUG00000003366) #18	HOXB7 (ENSVVUG00000003360) #19	HOXB6 (ENSVVUG00000003359) #20	HOXB5 (ENSVVUG00000003354) #21	ENSVVUG00000003340 #22	HOXB3 (ENSVVUG00000003329) #23	HOXB2 (ENSVVUG00000003328) #24	HOXB1 (ENSVVUG00000003325) #25	SKAP1 (ENSVVUG00000003297) #28	SNX11 (ENSVVUG00000003276) #29	ENSVVUG00000003272 #30	NFE2L1 (ENSVVUG00000003262) #31	COPZ2 (ENSVVUG00000003249) #32	CDK5RAP3 (ENSVVUG00000003227) #33	PRR15L (ENSVVUG00000003218) #34	PNPO (ENSVVUG00000003178) #35	SP2 (ENSVVUG00000003171) #36	SP6 (ENSVVUG00000003167) #37	SCRN2 (ENSVVUG00000003154)	LRRC46 (ENSVVUG00000003146)
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.c #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Dog	MODERN SPECIES	37	ENSCAFG00845010742	B4GALNT2 (ENSCAFG00845010693) #7	IGF2BP1 (ENSCAFG00845010596) #8	GIP (ENSCAFG00845010532) #9	SNF8 (ENSCAFG00845010455) #10	UBE2Z (ENSCAFG00845010395) #12	ATP5MC1 (ENSCAFG00845010336) #13	CALCOCO2 (ENSCAFG00845010119) #14	TTLL6 (ENSCAFG00845010017) #15	HOXB13 (ENSCAFG00845009992) #16	HOXB9 (ENSCAFG00845009956) #17	HOXB8 (ENSCAFG00845009931) #18	HOXB7 (ENSCAFG00845009899) #19	HOXB6 (ENSCAFG00845009871) #20	HOXB5 (ENSCAFG00845009832) #21	HOXB4 (ENSCAFG00845017264) #22	HOXB3 (ENSCAFG00845017188) #23	HOXB2 (ENSCAFG00845017142) #24	HOXB1 (ENSCAFG00845017096) #25	SKAP1 (ENSCAFG00845016959) #28	SNX11 (ENSCAFG00845016720) #29	CBX1 (ENSCAFG00845016596) #30	NFE2L1 (ENSCAFG00845016388) #31	COPZ2 (ENSCAFG00845016156) #32	CDK5RAP3 (ENSCAFG00845016051) #33	ENSCAFG00845016000	PRR15L (ENSCAFG00845015978) #34	PNPO (ENSCAFG00845015876) #35	SP2 (ENSCAFG00845015786) #36	SP6 (ENSCAFG00845015746) #37	SCRN2 (ENSCAFG00845015686)
Dingo	MODERN SPECIES	150	B4GALNT2 (ENSCAFG00020023386) #7	ENSCAFG00020023382	IGF2BP1 (ENSCAFG00020023369) #8	GIP (ENSCAFG00020023360) #9	SNF8 (ENSCAFG00020023354) #10	UBE2Z (ENSCAFG00020023351) #12	ENSCAFG00020023349 #13	CALCOCO2 (ENSCAFG00020023334) #14	TTLL6 (ENSCAFG00020023324) #15	HOXB13 (ENSCAFG00020023319) #16	HOXB9 (ENSCAFG00020023312) #17	HOXB8 (ENSCAFG00020023306) #18	ENSCAFG00020023303 #19	HOXB6 (ENSCAFG00020023302) #20	HOXB5 (ENSCAFG00020023301) #21	HOXB4 (ENSCAFG00020023297) #22	HOXB3 (ENSCAFG00020023294) #23	HOXB2 (ENSCAFG00020023293) #24	HOXB1 (ENSCAFG00020023290) #25	SKAP1 (ENSCAFG00020023287) #28	SNX11 (ENSCAFG00020023282) #29	CBX1 (ENSCAFG00020023275) #30	NFE2L1 (ENSCAFG00020023270) #31	COPZ2 (ENSCAFG00020023263) #32	CDK5RAP3 (ENSCAFG00020023258) #33	PRR15L (ENSCAFG00020023256) #34	PNPO (ENSCAFG00020023249) #35	SP2 (ENSCAFG00020023246) #36	SP6 (ENSCAFG00020023243) #37	SCRN2 (ENSCAFG00020023238)	LRRC46 (ENSCAFG00020023236)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000162072 #22
Hedgehog	MODERN SPECIES	16385																HOXB4 (ENSEEUG00000007049) #22
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Glires	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Rodentia	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Myomorpha	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Muroidea	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a #13	ENSGT00940000159720.ab #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.a.a ##30	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a #13	ENSGT00940000159720.`b.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.a.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Chinese hamster chok1gshd	MODERN SPECIES	33	B4galnt2 (ENSCGRG00001014272) #7	ENSCGRG00001000282 #8	Gip (ENSCGRG00001021533) #9	Snf8 (ENSCGRG00001000737) #10	Ube2z (ENSCGRG00001019150) #12	ENSCGRG00001022606 #13	ENSCGRG00001010560	ENSCGRG00001011435 #14	Ttll6 (ENSCGRG00001018398) #15	Hoxb13 (ENSCGRG00001015060) #16	Hoxb9 (ENSCGRG00001015314) #17	Hoxb8 (ENSCGRG00001020235) #18	Hoxb7 (ENSCGRG00001021590) #19	Hoxb6 (ENSCGRG00001015674) #20	Hoxb5 (ENSCGRG00001016167) #21	Hoxb4 (ENSCGRG00001022431) #22	Hoxb3 (ENSCGRG00001016667) #23	Hoxb2 (ENSCGRG00001017587) #24	Hoxb1 (ENSCGRG00001024619) #25	ENSCGRG00001023355 #28	ENSCGRG00001020759 #28	Snx11 (ENSCGRG00001022221) #29	Cbx1 (ENSCGRG00001014799) ##30	Nfe2l1 (ENSCGRG00001015287) #31	Copz2 (ENSCGRG00001014767) #32	Cdk5rap3 (ENSCGRG00001006966) #33	Prr15l (ENSCGRG00001008926) #34	Pnpo (ENSCGRG00001018189) #35	Sp2 (ENSCGRG00001010976) #36	Sp6 (ENSCGRG00001002797) #37	Scrn2 (ENSCGRG00001022143)
Golden Hamster	MODERN SPECIES	674	Phospho1 (ENSMAUG00000012074)	Abi3 (ENSMAUG00000021085)	Gngt2 (ENSMAUG00000019144)	B4galnt2 (ENSMAUG00000007916) #7	Gip (ENSMAUG00000009238) #9	Snf8 (ENSMAUG00000001857) #10	Ube2z (ENSMAUG00000007792) #12	ENSMAUG00000021751 #13	Ttll6 (ENSMAUG00000020973) #15	Hoxb13 (ENSMAUG00000008407) #16	Hoxb9 (ENSMAUG00000017720) #17	Hoxb8 (ENSMAUG00000012636) #18	Hoxb7 (ENSMAUG00000021297) #19	Hoxb6 (ENSMAUG00000021423) #20	Hoxb5 (ENSMAUG00000021419) #21	Hoxb4 (ENSMAUG00000009367) #22	Hoxb3 (ENSMAUG00000011251) #23	Hoxb2 (ENSMAUG00000021979) #24	Hoxb1 (ENSMAUG00000013237) #25	Skap1 (ENSMAUG00000022191) #28	Snx11 (ENSMAUG00000021528) #29	ENSMAUG00000003463 #30	Nfe2l1 (ENSMAUG00000020456) #31	Copz2 (ENSMAUG00000010560) #32	Cdk5rap3 (ENSMAUG00000007991) #33	Pnpo (ENSMAUG00000021706) #35	Sp2 (ENSMAUG00000019269) #36	Sp6 (ENSMAUG00000009667) #37	Scrn2 (ENSMAUG00000010014)	Lrrc46 (ENSMAUG00000019416)	Mrpl10 (ENSMAUG00000000820)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a #13	ENSGT00940000159720.ab #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Prairie vole	MODERN SPECIES	114				ENSMOCG00000004266	ENSMOCG00000021226 #9	Snf8 (ENSMOCG00000016684) #10	Ube2z (ENSMOCG00000018241) #12	ENSMOCG00000013163 #13	Ttll6 (ENSMOCG00000021089) #15	Hoxb13 (ENSMOCG00000021389) #16	Hoxb9 (ENSMOCG00000020312) #17	Hoxb8 (ENSMOCG00000018435) #18	Hoxb7 (ENSMOCG00000020820) #19	Hoxb6 (ENSMOCG00000020355) #20	Hoxb5 (ENSMOCG00000014523) #21	Hoxb4 (ENSMOCG00000022964) #22	Hoxb3 (ENSMOCG00000020739) #23	Hoxb2 (ENSMOCG00000014846) #24	Hoxb1 (ENSMOCG00000002452) #25	Skap1 (ENSMOCG00000018431) #28	Snx11 (ENSMOCG00000019303) #29	Cbx1 (ENSMOCG00000001520) #30	Nfe2l1 (ENSMOCG00000016002) #31	Copz2 (ENSMOCG00000022427) #32	Cdk5rap3 (ENSMOCG00000019534) #33	Prr15l (ENSMOCG00000006695) #34	Pnpo (ENSMOCG00000011655) #35	Sp2 (ENSMOCG00000020935) #36	Sp6 (ENSMOCG00000007065) #37	Scrn2 (ENSMOCG00000019511)	Lrrc46 (ENSMOCG00000016707)
Northern American deer mouse	MODERN SPECIES	21	Phospho1 (ENSPEMG00000026539)	Abi3 (ENSPEMG00000014242)	Gngt2 (ENSPEMG00000027491)	B4galnt2 (ENSPEMG00000020717) #7	Igf2bp1 (ENSPEMG00000021974) #8	Gip (ENSPEMG00000021184) #9	Snf8 (ENSPEMG00000022229) #10	Ube2z (ENSPEMG00000020953) #12	Atp5g1 (ENSPEMG00000020590) #13	ENSPEMG00000028729 #14	ENSPEMG00000025676 #14	Ttll6 (ENSPEMG00000021918) #15	Hoxb13 (ENSPEMG00000021511) #16	Hoxb9 (ENSPEMG00000027158) #17	Hoxb5 (ENSPEMG00000030101) #21	Hoxb4 (ENSPEMG00000029805) #22	Hoxb3 (ENSPEMG00000028692) #23	Hoxb2 (ENSPEMG00000029510) #24	Hoxb1 (ENSPEMG00000023977) #25	Skap1 (ENSPEMG00000000585) #28	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #29	Cbx1 (ENSPEMG00000020976) ##30	Nfe2l1 (ENSPEMG00000010512) #31	Copz2 (ENSPEMG00000011137) #32	Cdk5rap3 (ENSPEMG00000020712) #33	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #34	Pnpo (ENSPEMG00000025094) #35	Sp2 (ENSPEMG00000017112) #36	Sp6 (ENSPEMG00000001231) #37
Murinae	ANCESTRAL SPECIES	6	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Mus	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Mus_A	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Mus_B	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Mus_C	ANCESTRAL SPECIES	3	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Steppe mouse	MODERN SPECIES	3291	Gngt2 (ENSMSIG00000019268)	B4galnt2 (ENSMSIG00000019230) #7	Igf2bp1 (ENSMSIG00000019193) #8	Gip (ENSMSIG00000019162) #9	Snf8 (ENSMSIG00000019072) #10	Ube2z (ENSMSIG00000019038) #12	Atp5g1 (ENSMSIG00000018986) #13	ENSMSIG00000018956 #14	Ttll6 (ENSMSIG00000018881) #15	Hoxb13 (ENSMSIG00000018865) #16	Hoxb9 (ENSMSIG00000018823) #17	Hoxb8 (ENSMSIG00000018807) #18	Hoxb7 (ENSMSIG00000018805) #19	Hoxb6 (ENSMSIG00000018795) #20	Hoxb5 (ENSMSIG00000018787) #21	Hoxb4 (ENSMSIG00000018777) #22	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #23	Hoxb2 (ENSMSIG00000018769) #24	Hoxb1 (ENSMSIG00000018752) #25	Skap1 (ENSMSIG00000018601) #28	Snx11 (ENSMSIG00000018546) #29	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #30	Nfe2l1 (ENSMSIG00000018374) #31	Copz2 (ENSMSIG00000018337) #32	Cdk5rap3 (ENSMSIG00000018309) #33	ENSMSIG00000018270 #34	ENSMSIG00000018267 #35	Sp2 (ENSMSIG00000018237) #36	Sp6 (ENSMSIG00000018223) #37
spretus	MODERN SPECIES	2	Gngt2 (MGP_SPRETEiJ_G0017860)	B4galnt2 (MGP_SPRETEiJ_G0017861) #7	Igf2bp1 (MGP_SPRETEiJ_G0017862) #8	Gip (MGP_SPRETEiJ_G0017863) #9	Snf8 (MGP_SPRETEiJ_G0017864) #10	Ube2z (MGP_SPRETEiJ_G0017865) #12	Atp5g1 (MGP_SPRETEiJ_G0017866) #13	MGP_SPRETEiJ_G0017867 #14	Ttll6 (MGP_SPRETEiJ_G0017868) #15	Hoxb13 (MGP_SPRETEiJ_G0017869) #16	Hoxb9 (MGP_SPRETEiJ_G0017870) #17	Hoxb8 (MGP_SPRETEiJ_G0017871) #18	Hoxb7 (MGP_SPRETEiJ_G0017872) #19	Hoxb6 (MGP_SPRETEiJ_G0017873) #20	Hoxb5 (MGP_SPRETEiJ_G0017874) #21	Hoxb4 (MGP_SPRETEiJ_G0017875) #22	Hoxb3 (MGP_SPRETEiJ_G0017876) #23	Hoxb2 (MGP_SPRETEiJ_G0017877) #24	Hoxb1 (MGP_SPRETEiJ_G0017878) #25	MGP_SPRETEiJ_G0017879 #28	Snx11 (MGP_SPRETEiJ_G0017880) #29	Cbx1 (MGP_SPRETEiJ_G0017881) #30	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #31	Copz2 (MGP_SPRETEiJ_G0017884) #32	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #33	Prr15l (MGP_SPRETEiJ_G0017886) #34	Pnpo (MGP_SPRETEiJ_G0017887) #35	Sp2 (MGP_SPRETEiJ_G0017888) #36	Sp6 (MGP_SPRETEiJ_G0017889) #37	Scrn2 (MGP_SPRETEiJ_G0017890)
Mouse	MODERN SPECIES	2	Gngt2 (ENSMUSG00000038811)	B4galnt2 (ENSMUSG00000013418) #7	Igf2bp1 (ENSMUSG00000013415) #8	Gip (ENSMUSG00000014351) #9	Snf8 (ENSMUSG00000006058) #10	Ube2z (ENSMUSG00000014349) #12	Atp5g1 (ENSMUSG00000006057) #13	Calcoco2 (ENSMUSG00000006056) #14	Ttll6 (ENSMUSG00000038756) #15	Hoxb13 (ENSMUSG00000049604) #16	Hoxb9 (ENSMUSG00000020875) #17	Hoxb8 (ENSMUSG00000056648) #18	Hoxb7 (ENSMUSG00000038721) #19	Hoxb6 (ENSMUSG00000000690) #20	Hoxb5 (ENSMUSG00000038700) #21	Hoxb4 (ENSMUSG00000038692) #22	Hoxb3 (ENSMUSG00000048763) #23	Hoxb2 (ENSMUSG00000075588) #24	Hoxb1 (ENSMUSG00000018973) #25	Skap1 (ENSMUSG00000057058) #28	Snx11 (ENSMUSG00000020876) #29	Cbx1 (ENSMUSG00000018666) #30	Nfe2l1 (ENSMUSG00000038615) #31	Copz2 (ENSMUSG00000018672) #32	Cdk5rap3 (ENSMUSG00000018669) #33	Prr15l (ENSMUSG00000047040) #34	Pnpo (ENSMUSG00000018659) #35	Sp2 (ENSMUSG00000018678) #36	Sp6 (ENSMUSG00000038560) #37	Scrn2 (ENSMUSG00000020877)	Lrrc46 (ENSMUSG00000020878)
Ryukyu mouse	MODERN SPECIES	2	Gngt2 (MGP_CAROLIEiJ_G0017014)	B4galnt2 (MGP_CAROLIEiJ_G0017015) #7	Igf2bp1 (MGP_CAROLIEiJ_G0017016) #8	Gip (MGP_CAROLIEiJ_G0017017) #9	Snf8 (MGP_CAROLIEiJ_G0017018) #10	MGP_CAROLIEiJ_G0017019 #12	MGP_CAROLIEiJ_G0017020 #13	MGP_CAROLIEiJ_G0017021 #14	Ttll6 (MGP_CAROLIEiJ_G0017022) #15	Hoxb13 (MGP_CAROLIEiJ_G0017023) #16	Hoxb9 (MGP_CAROLIEiJ_G0017024) #17	Hoxb8 (MGP_CAROLIEiJ_G0017025) #18	Hoxb7 (MGP_CAROLIEiJ_G0017026) #19	Hoxb6 (MGP_CAROLIEiJ_G0017027) #20	Hoxb5 (MGP_CAROLIEiJ_G0017028) #21	Hoxb4 (MGP_CAROLIEiJ_G0017029) #22	Hoxb3 (MGP_CAROLIEiJ_G0017030) #23	Hoxb2 (MGP_CAROLIEiJ_G0017031) #24	Hoxb1 (MGP_CAROLIEiJ_G0017032) #25	Skap1 (MGP_CAROLIEiJ_G0017033) #28	Snx11 (MGP_CAROLIEiJ_G0017034) #29	Cbx1 (MGP_CAROLIEiJ_G0017035) #30	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #31	Copz2 (MGP_CAROLIEiJ_G0017038) #32	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #33	Prr15l (MGP_CAROLIEiJ_G0017040) #34	Pnpo (MGP_CAROLIEiJ_G0017041) #35	Sp2 (MGP_CAROLIEiJ_G0017042) #36	Sp6 (MGP_CAROLIEiJ_G0017043) #37	MGP_CAROLIEiJ_G0017044
Shrew mouse	MODERN SPECIES	5	Gngt2 (MGP_PahariEiJ_G0018144)	B4galnt2 (MGP_PahariEiJ_G0018145) #7	MGP_PahariEiJ_G0018146 #8	Gip (MGP_PahariEiJ_G0018147) #9	Snf8 (MGP_PahariEiJ_G0018148) #10	Ube2z (MGP_PahariEiJ_G0018149) #12	Atp5g1 (MGP_PahariEiJ_G0018150) #13	MGP_PahariEiJ_G0018151 #14	Ttll6 (MGP_PahariEiJ_G0018152) #15	Hoxb13 (MGP_PahariEiJ_G0018153) #16	Hoxb9 (MGP_PahariEiJ_G0018154) #17	Hoxb8 (MGP_PahariEiJ_G0018155) #18	Hoxb7 (MGP_PahariEiJ_G0018156) #19	Hoxb6 (MGP_PahariEiJ_G0018157) #20	Hoxb5 (MGP_PahariEiJ_G0018158) #21	Hoxb4 (MGP_PahariEiJ_G0018159) #22	Hoxb3 (MGP_PahariEiJ_G0018160) #23	Hoxb2 (MGP_PahariEiJ_G0018161) #24	Hoxb1 (MGP_PahariEiJ_G0018162) #25	Skap1 (MGP_PahariEiJ_G0018163) #28	Snx11 (MGP_PahariEiJ_G0018164) #29	Cbx1 (MGP_PahariEiJ_G0018165) #30	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #31	Copz2 (MGP_PahariEiJ_G0018168) #32	Cdk5rap3 (MGP_PahariEiJ_G0018169) #33	Prr15l (MGP_PahariEiJ_G0018170) #34	Pnpo (MGP_PahariEiJ_G0018171) #35	Sp2 (MGP_PahariEiJ_G0018172) #36	Sp6 (MGP_PahariEiJ_G0018173) #37	Scrn2 (MGP_PahariEiJ_G0018174)
Rat	MODERN SPECIES	1	Phospho1 (ENSRNOG00000005569)	Abi3 (ENSRNOG00000005575)	B4galnt2 (ENSRNOG00000067203) #7	Igf2bp1 (ENSRNOG00000006122) #8	Gip (ENSRNOG00000006306) #9	Snf8 (ENSRNOG00000006500) #10	Ube2z (ENSRNOG00000006868) #12	ENSRNOG00000066153 #14	Ttll6 (ENSRNOG00000004939) #15	Hoxb13 (ENSRNOG00000007491) #16	Hoxb9 (ENSRNOG00000007573) #17	Hoxb8 (ENSRNOG00000007585) #18	Hoxb7 (ENSRNOG00000007611) #19	Hoxb6 (ENSRNOG00000007823) #20	Hoxb5 (ENSRNOG00000008010) #21	Hoxb4 (ENSRNOG00000008191) #22	Hoxb3 (ENSRNOG00000008313) #23	Hoxb2 (ENSRNOG00000008365) #24	Hoxb1 (ENSRNOG00000008506) #25	Skap1 (ENSRNOG00000023881) #28	Snx11 (ENSRNOG00000008642) #29	Cbx1 (ENSRNOG00000008689) #30	Nfe2l1 (ENSRNOG00000008830) #31	Copz2 (ENSRNOG00000009225) #32	Cdk5rap3 (ENSRNOG00000048747) #33	Prr15l (ENSRNOG00000049162) #34	Pnpo (ENSRNOG00000046493) #35	Sp2 (ENSRNOG00000010492) #36	Sp6 (ENSRNOG00000023551) #37	Scrn2 (ENSRNOG00000010214)	Lrrc46 (ENSRNOG00000009902)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Gngt2 (ENSNGAG00000001081)	B4galnt2 (ENSNGAG00000016426) #7	Igf2bp1 (ENSNGAG00000015679) #8	Gip (ENSNGAG00000020354) #9	Snf8 (ENSNGAG00000001366) #10	Ube2z (ENSNGAG00000024296) #12	ENSNGAG00000024212 #13	ENSNGAG00000023585 #14	Ttll6 (ENSNGAG00000011763) #15	Hoxb13 (ENSNGAG00000011053) #16	Hoxb9 (ENSNGAG00000010851) #17	Hoxb8 (ENSNGAG00000010647) #18	Hoxb7 (ENSNGAG00000010205) #19	Hoxb6 (ENSNGAG00000000973) #20	Hoxb5 (ENSNGAG00000023238) #21	Hoxb4 (ENSNGAG00000021768) #22	Hoxb3 (ENSNGAG00000020227) #23	Hoxb2 (ENSNGAG00000019089) #24	Hoxb1 (ENSNGAG00000018593) #25	Skap1 (ENSNGAG00000012571) #28	Snx11 (ENSNGAG00000010446) #29	Cbx1 (ENSNGAG00000006760) #30	Nfe2l1 (ENSNGAG00000000736) #31	Copz2 (ENSNGAG00000023713) #32	ENSNGAG00000000747 #33	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432) #34	Pnpo (ENSNGAG00000020016) #35	Sp2 (ENSNGAG00000017612) #36	Sp6 (ENSNGAG00000015868) #37	Scrn2 (ENSNGAG00000023806)
Lesser Egyptian jerboa	MODERN SPECIES	56	Gngt2 (ENSJJAG00000002044)	ENSJJAG00000002566	B4galnt2 (ENSJJAG00000006322) #7	Igf2bp1 (ENSJJAG00000002687) #8	Gip (ENSJJAG00000010688) #9	Snf8 (ENSJJAG00000006012) #10	ENSJJAG00000003530 #12	ENSJJAG00000010301 #13	Ttll6 (ENSJJAG00000010253) #15	Hoxb13 (ENSJJAG00000010401) #16	Hoxb9 (ENSJJAG00000009821) #17	Hoxb8 (ENSJJAG00000002398) #18	Hoxb7 (ENSJJAG00000001284) #19	Hoxb6 (ENSJJAG00000000997) #20	Hoxb5 (ENSJJAG00000000763) #21	Hoxb4 (ENSJJAG00000002642) #22	Hoxb3 (ENSJJAG00000007804) #23	Hoxb2 (ENSJJAG00000009465) #24	Hoxb1 (ENSJJAG00000001073) #25	Skap1 (ENSJJAG00000003458) #28	ENSJJAG00000005754 #29	ENSJJAG00000007753 #30	Nfe2l1 (ENSJJAG00000006432) #31	Copz2 (ENSJJAG00000001025) #32	ENSJJAG00000002511 #33	Prr15l (ENSJJAG00000006478) #34	Pnpo (ENSJJAG00000023608) #35	Sp2 (ENSJJAG00000003061) #36	Sp6 (ENSJJAG00000006452) #37	Scrn2 (ENSJJAG00000023635)	Lrrc46 (ENSJJAG00000010412)
Kangaroo rat	MODERN SPECIES	326	Phospho1 (ENSDORG00000002249)	Abi3 (ENSDORG00000002245)	Gngt2 (ENSDORG00000023588)	Igf2bp1 (ENSDORG00000014371) #8	Snf8 (ENSDORG00000009262) #10	Ube2z (ENSDORG00000009258) #12	ENSDORG00000008511	ENSDORG00000028385	ENSDORG00000024585 #14	Hoxb13 (ENSDORG00000008369) #16	Hoxb9 (ENSDORG00000027423) #17	Hoxb8 (ENSDORG00000007906) #18	Hoxb7 (ENSDORG00000007905) #19	Hoxb6 (ENSDORG00000023877) #20	Hoxb5 (ENSDORG00000007900) #21	Hoxb4 (ENSDORG00000007899) #22	Hoxb3 (ENSDORG00000007898) #23	Hoxb2 (ENSDORG00000007897) #24	Hoxb1 (ENSDORG00000007896) #25	Snx11 (ENSDORG00000029078) #29	Cbx1 (ENSDORG00000026399) #30	Nfe2l1 (ENSDORG00000000715) #31	Copz2 (ENSDORG00000013441) #32	Prr15l (ENSDORG00000027427) #34	Pnpo (ENSDORG00000014110) #35	Sp2 (ENSDORG00000014109) #36	Sp6 (ENSDORG00000026201) #37	Scrn2 (ENSDORG00000002361)	Osbpl7 (ENSDORG00000002354)	Tbx21 (ENSDORG00000013302)	Npepps (ENSDORG00000009627)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Marmotini	ANCESTRAL SPECIES	8	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Alpin marmot	MODERN SPECIES	42	PHOSPHO1 (ENSMMMG00000000434)	ABI3 (ENSMMMG00000000452)	GNGT2 (ENSMMMG00000000525)	B4GALNT2 (ENSMMMG00000000569) #7	IGF2BP1 (ENSMMMG00000000613) #8	GIP (ENSMMMG00000000652) #9	SNF8 (ENSMMMG00000000680) #10	UBE2Z (ENSMMMG00000000717) #12	ATP5MC1 (ENSMMMG00000000731)	ENSMMMG00000000759 #14	TTLL6 (ENSMMMG00000001013) #15	HOXB13 (ENSMMMG00000001064) #16	HOXB7 (ENSMMMG00000001087) #19	HOXB6 (ENSMMMG00000001098) #20	HOXB5 (ENSMMMG00000001112) #21	HOXB4 (ENSMMMG00000001129) #22	HOXB3 (ENSMMMG00000001139) #23	HOXB1 (ENSMMMG00000001151) #25	SKAP1 (ENSMMMG00000001168) #28	SNX11 (ENSMMMG00000001243) #29	CBX1 (ENSMMMG00000001254) #30	NFE2L1 (ENSMMMG00000001284) #31	COPZ2 (ENSMMMG00000001352) #32	CDK5RAP3 (ENSMMMG00000001404) #33	GOSR2 (ENSMMMG00000001471)	RPRML (ENSMMMG00000001486)	LYZL6 (ENSMMMG00000001501)	ENSMMMG00000001520	ENSMMMG00000001551	ENSMMMG00000001756	ENSMMMG00000001792
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Arctic ground squirrel	MODERN SPECIES	46	GNGT2 (ENSUPAG00010006078)	B4GALNT2 (ENSUPAG00010006086) #7	IGF2BP1 (ENSUPAG00010006100) #8	GIP (ENSUPAG00010006136) #9	SNF8 (ENSUPAG00010006148) #10	UBE2Z (ENSUPAG00010006178) #12	ENSUPAG00010006195 #13	CALCOCO2 (ENSUPAG00010006243) #14	TTLL6 (ENSUPAG00010006267) #15	HOXB13 (ENSUPAG00010006301) #16	HOXB9 (ENSUPAG00010006305) #17	HOXB8 (ENSUPAG00010006310) #18	HOXB7 (ENSUPAG00010006312) #19	HOXB6 (ENSUPAG00010006317) #20	HOXB5 (ENSUPAG00010006320) #21	HOXB4 (ENSUPAG00010006325) #22	HOXB3 (ENSUPAG00010006328) #23	HOXB2 (ENSUPAG00010006336) #24	HOXB1 (ENSUPAG00010006340) #25	SKAP1 (ENSUPAG00010006345) #28	SNX11 (ENSUPAG00010006370) #29	CBX1 (ENSUPAG00010006381) #30	NFE2L1 (ENSUPAG00010006396) #31	COPZ2 (ENSUPAG00010006455) #32	CDK5RAP3 (ENSUPAG00010006466) #33	PRR15L (ENSUPAG00010006473) #34	PNPO (ENSUPAG00010006483) #35	SP2 (ENSUPAG00010006507) #36	SP6 (ENSUPAG00010006522) #37	SCRN2 (ENSUPAG00010006526)	LRRC46 (ENSUPAG00010006533)
Squirrel	MODERN SPECIES	90	B4GALNT2 (ENSSTOG00000007604) #7	IGF2BP1 (ENSSTOG00000010643) #8	GIP (ENSSTOG00000004043) #9	SNF8 (ENSSTOG00000004023) #10	UBE2Z (ENSSTOG00000000796) #12	ATP5MC1 (ENSSTOG00000013404)	ENSSTOG00000013395 #14	TTLL6 (ENSSTOG00000006016) #15	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #16	HOXB9 (ENSSTOG00000009741) #17	HOXB8 (ENSSTOG00000028337) #18	HOXB7 (ENSSTOG00000025657) #19	HOXB6 (ENSSTOG00000020303) #20	HOXB5 (ENSSTOG00000009740) #21	HOXB4 (ENSSTOG00000009734) #22	HOXB3 (ENSSTOG00000025093) #23	HOXB2 (ENSSTOG00000023586) #24	HOXB1 (ENSSTOG00000028630) #25	SKAP1 (ENSSTOG00000013692) #28	SNX11 (ENSSTOG00000013684) #29	CBX1 (ENSSTOG00000023986) #30	NFE2L1 (ENSSTOG00000013664) #31	ENSSTOG00000027550 #32	CDK5RAP3 (ENSSTOG00000006244) #33	PRR15L (ENSSTOG00000006235) #34	PNPO (ENSSTOG00000006221) #35	SP2 (ENSSTOG00000015926) #36	SP6 (ENSSTOG00000001607) #37	SCRN2 (ENSSTOG00000027108)	LRRC46 (ENSSTOG00000002068)
Eurasian red squirrel	MODERN SPECIES	12	B4GALNT2 (ENSSVLG00005020850) #7	IGF2BP1 (ENSSVLG00005020596) #8	GIP (ENSSVLG00005020522) #9	SNF8 (ENSSVLG00005020472) #10	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428) #12	ATP5MC1 (ENSSVLG00005020344)	CALCOCO2 (ENSSVLG00005020296) #14	TTLL6 (ENSSVLG00005020005) #15	HOXB13 (ENSSVLG00005019820) #16	HOXB9 (ENSSVLG00005019725) #17	HOXB8 (ENSSVLG00005019675) #18	HOXB7 (ENSSVLG00005019618) #19	HOXB6 (ENSSVLG00005019586) #20	HOXB5 (ENSSVLG00005019546) #21	HOXB4 (ENSSVLG00005019455) #22	HOXB3 (ENSSVLG00005019421) #23	HOXB2 (ENSSVLG00005019378) #24	HOXB1 (ENSSVLG00005019304) #25	SKAP1 (ENSSVLG00005019232) #28	SNX11 (ENSSVLG00005019122) #29	CBX1 (ENSSVLG00005019034) #30	NFE2L1 (ENSSVLG00005018798) #31	COPZ2 (ENSSVLG00005018641) #32	CDK5RAP3 (ENSSVLG00005018459) #33	PRR15L (ENSSVLG00005018399) #34	PNPO (ENSSVLG00005018295) #35	ENSSVLG00005018218 #36	SP6 (ENSSVLG00005018194) #37	SCRN2 (ENSSVLG00005018077)	LRRC46 (ENSSVLG00005018036)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b.dc.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Long-tailed chinchilla	MODERN SPECIES	158	ABI3 (ENSCLAG00000015475)	GNGT2 (ENSCLAG00000014970)	B4GALNT2 (ENSCLAG00000016224) #7	IGF2BP1 (ENSCLAG00000015853) #8	ENSCLAG00000014301 #9	SNF8 (ENSCLAG00000013387) #10	UBE2Z (ENSCLAG00000016068) #12	ATP5MC1 (ENSCLAG00000015723)	CALCOCO2 (ENSCLAG00000015881) #14	TTLL6 (ENSCLAG00000013529) #15	HOXB13 (ENSCLAG00000014855) #16	ENSCLAG00000015198 #17	HOXB7 (ENSCLAG00000014906) #19	HOXB6 (ENSCLAG00000015524) #20	HOXB5 (ENSCLAG00000014374) #21	HOXB4 (ENSCLAG00000014725) #22	HOXB3 (ENSCLAG00000015322) #23	HOXB2 (ENSCLAG00000015271) #24	HOXB1 (ENSCLAG00000013047) #25	SKAP1 (ENSCLAG00000015423) #28	SNX11 (ENSCLAG00000015837) #29	CBX1 (ENSCLAG00000013587) #30	NFE2L1 (ENSCLAG00000014836) #31	COPZ2 (ENSCLAG00000013544) #32	CDK5RAP3 (ENSCLAG00000012292) #33	PRR15L (ENSCLAG00000017903) #34	PNPO (ENSCLAG00000013871) #35	SP2 (ENSCLAG00000014115) #36	SP6 (ENSCLAG00000016276) #37	LRRC46 (ENSCLAG00000016713)	SCRN2 (ENSCLAG00000013965)
Degu	MODERN SPECIES	97	ABI3 (ENSODEG00000017358)	GNGT2 (ENSODEG00000017526)	B4GALNT2 (ENSODEG00000018456) #7	ENSODEG00000016991 #8	ENSODEG00000017109	GIP (ENSODEG00000017003) #9	ENSODEG00000017032 #10	UBE2Z (ENSODEG00000017306) #12	ATP5MC1 (ENSODEG00000017366)	TTLL6 (ENSODEG00000017145) #15	HOXB13 (ENSODEG00000017199) #16	HOXB9 (ENSODEG00000017293) #17	HOXB8 (ENSODEG00000017119) #18	HOXB6 (ENSODEG00000016988) #20	HOXB5 (ENSODEG00000017253) #21	HOXB4 (ENSODEG00000017038) #22	HOXB3 (ENSODEG00000017116) #23	HOXB2 (ENSODEG00000017153) #24	HOXB1 (ENSODEG00000017050) #25	SKAP1 (ENSODEG00000017533) #28	SNX11 (ENSODEG00000017458) #29	CBX1 (ENSODEG00000017272) #30	NFE2L1 (ENSODEG00000017348) #31	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #32	ENSODEG00000017229 #33	PNPO (ENSODEG00000017424) #35	SP2 (ENSODEG00000017126) #36	SP6 (ENSODEG00000017625) #37	SCRN2 (ENSODEG00000017395)	LRRC46 (ENSODEG00000017367)
Naked mole-rat female	MODERN SPECIES	12	B4GALNT2 (ENSHGLG00000011792) #7	IGF2BP1 (ENSHGLG00000010492) #8	ENSHGLG00000010703 #9	SNF8 (ENSHGLG00000011519) #10	UBE2Z (ENSHGLG00000016280) #12	ATP5MC1 (ENSHGLG00000035460)	CALCOCO2 (ENSHGLG00000012114) #14	TTLL6 (ENSHGLG00000019187) #15	HOXB13 (ENSHGLG00000014634) #16	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #17	HOXB8 (ENSHGLG00000038380) #18	HOXB7 (ENSHGLG00000045318) #19	HOXB6 (ENSHGLG00000012400) #20	HOXB5 (ENSHGLG00000039265) #21	HOXB4 (ENSHGLG00000034075) #22	HOXB3 (ENSHGLG00000010686) #23	HOXB2 (ENSHGLG00000010090) #24	HOXB1 (ENSHGLG00000009781) #25	SKAP1 (ENSHGLG00000014563) #28	SNX11 (ENSHGLG00000016837) #29	CBX1 (ENSHGLG00000013574) #30	NFE2L1 (ENSHGLG00000012592) #31	COPZ2 (ENSHGLG00000018543) #32	CDK5RAP3 (ENSHGLG00000019464) #33	PRR15L (ENSHGLG00000014696) #34	PNPO (ENSHGLG00000013159) #35	SP2 (ENSHGLG00000009902) #36	SP6 (ENSHGLG00000021113) #37	SCRN2 (ENSHGLG00000041375)	LRRC46 (ENSHGLG00000035931)
Primates	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Tarsier	MODERN SPECIES	4193													HOXB7 (ENSTSYG00000028173) #19	HOXB6 (ENSTSYG00000031001) #20	HOXB5 (ENSTSYG00000032912) #21	HOXB4 (ENSTSYG00000026874) #22	ENSTSYG00000029322	HOXB3 (ENSTSYG00000035231) #23	HOXB2 (ENSTSYG00000004903) #24	HOXB1 (ENSTSYG00000004656) #25
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00390000007843.v #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00390000007843.v #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713.h.b #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Hominidae	ANCESTRAL SPECIES	16	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713.h.a #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713.h.a.a.b #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713.h.a.a.b #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Pan	ANCESTRAL SPECIES	3	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713.h.a.a.b #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Chimpanzee	MODERN SPECIES	8	GIP (ENSPTRG00000009367) #9	SNF8 (ENSPTRG00000051067) #10	UBE2Z (ENSPTRG00000009365) #12	ENSPTRG00000051053 #11	ATP5MC1 (ENSPTRG00000009364)	CALCOCO2 (ENSPTRG00000009363) #14	TTLL6 (ENSPTRG00000009361) #15	HOXB13 (ENSPTRG00000009360) #16	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359)	HOXB9 (ENSPTRG00000009358) #17	HOXB8 (ENSPTRG00000048497) #18	HOXB7 (ENSPTRG00000009357) #19	HOXB6 (ENSPTRG00000009356) #20	HOXB5 (ENSPTRG00000009355) #21	HOXB4 (ENSPTRG00000009354) #22	HOXB3 (ENSPTRG00000052423) #23	HOXB2 (ENSPTRG00000009352) #24	HOXB1 (ENSPTRG00000009351) #25	SKAP1 (ENSPTRG00000009350) #28	SNX11 (ENSPTRG00000009349) #29	CBX1 (ENSPTRG00000052115) #30	NFE2L1 (ENSPTRG00000022631) #31	COPZ2 (ENSPTRG00000009346) #32	CDK5RAP3 (ENSPTRG00000009345) #33	PRR15L (ENSPTRG00000047216) #34	PNPO (ENSPTRG00000009343) #35	SP2 (ENSPTRG00000009342) #36	SP6 (ENSPTRG00000009340) #37	SCRN2 (ENSPTRG00000009339)	LRRC46 (ENSPTRG00000009338)
Bonobo	MODERN SPECIES	8	IGF2BP1 (ENSPPAG00000040224) #8	ENSPPAG00000029732	SNF8 (ENSPPAG00000030822) #10	ENSPPAG00000029824 #11	ENSPPAG00000001213 #12	ATP5MC1 (ENSPPAG00000039996)	CALCOCO2 (ENSPPAG00000037813) #14	TTLL6 (ENSPPAG00000036197) #15	HOXB13 (ENSPPAG00000027794) #16	PRAC1 (ENSPPAG00000014004)	HOXB9 (ENSPPAG00000028486) #17	HOXB8 (ENSPPAG00000034804) #18	HOXB7 (ENSPPAG00000010963) #19	HOXB6 (ENSPPAG00000032229) #20	HOXB5 (ENSPPAG00000039181) #21	HOXB4 (ENSPPAG00000040659) #22	HOXB3 (ENSPPAG00000032630) #23	HOXB2 (ENSPPAG00000027417) #24	HOXB1 (ENSPPAG00000039129) #25	SKAP1 (ENSPPAG00000039277) #28	SNX11 (ENSPPAG00000033185) #29	ENSPPAG00000030413 #30	NFE2L1 (ENSPPAG00000031737) #31	COPZ2 (ENSPPAG00000043351) #32	ENSPPAG00000029145 #33	PRR15L (ENSPPAG00000003316) #34	PNPO (ENSPPAG00000038148) #35	SP2 (ENSPPAG00000027065) #36	SP6 (ENSPPAG00000026169) #37	SCRN2 (ENSPPAG00000028214)	LRRC46 (ENSPPAG00000038983)
Human	MODERN SPECIES	8	IGF2BP1 (ENSG00000159217) #8	GIP (ENSG00000159224) #9	SNF8 (ENSG00000159210) #10	UBE2Z (ENSG00000159202) #12	ATP5MC1 (ENSG00000159199)	CALCOCO2 (ENSG00000136436) #14	TTLL6 (ENSG00000170703) #15	HOXB13 (ENSG00000159184) #16	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182)	HOXB9 (ENSG00000170689) #17	HOXB8 (ENSG00000120068) #18	HOXB7 (ENSG00000260027) #19	HOXB6 (ENSG00000108511) #20	HOXB5 (ENSG00000120075) #21	HOXB4 (ENSG00000182742) #22	HOXB3 (ENSG00000120093) #23	HOXB2 (ENSG00000173917) #24	HOXB1 (ENSG00000120094) #25	SKAP1 (ENSG00000141293) #28	SNX11 (ENSG00000002919) #29	CBX1 (ENSG00000108468) #30	NFE2L1 (ENSG00000082641) #31	COPZ2 (ENSG00000005243) #32	CDK5RAP3 (ENSG00000108465) #33	PRR15L (ENSG00000167183) #34	PNPO (ENSG00000108439) #35	SP2 (ENSG00000167182) #36	SP6 (ENSG00000189120) #37	SCRN2 (ENSG00000141295)	LRRC46 (ENSG00000141294)
Orangutan	MODERN SPECIES	8	IGF2BP1 (ENSPPYG00000008913) #8	GIP (ENSPPYG00000008912) #9	ENSPPYG00000008911 #10	UBE2Z (ENSPPYG00000032681) #12	ATP5MC1 (ENSPPYG00000008909)	CALCOCO2 (ENSPPYG00000008907) #14	TTLL6 (ENSPPYG00000008906) #15	HOXB13 (ENSPPYG00000008904) #16	ENSPPYG00000036609	PRAC1 (ENSPPYG00000008903)	HOXB9 (ENSPPYG00000008902) #17	HOXB8 (ENSPPYG00000038542) #18	HOXB7 (ENSPPYG00000008901) #19	HOXB6 (ENSPPYG00000008899) #20	HOXB5 (ENSPPYG00000008898) #21	HOXB4 (ENSPPYG00000008897) #22	HOXB3 (ENSPPYG00000008896) #23	HOXB2 (ENSPPYG00000008895) #24	HOXB1 (ENSPPYG00000008894) #25	SKAP1 (ENSPPYG00000008893) #28	SNX11 (ENSPPYG00000008892) #29	ENSPPYG00000008891 ##30	NFE2L1 (ENSPPYG00000036998) #31	ENSPPYG00000008889 #32	CDK5RAP3 (ENSPPYG00000008888) #33	PRR15L (ENSPPYG00000008887) #34	PNPO (ENSPPYG00000040967) #35	SP2 (ENSPPYG00000008885) #36	SP6 (ENSPPYG00000008884) #37	SCRN2 (ENSPPYG00000008883)	LRRC46 (ENSPPYG00000032761)
Gibbon	MODERN SPECIES	105	ABI3 (ENSNLEG00000002938)	ENSNLEG00000002931	B4GALNT2 (ENSNLEG00000002844) #7	IGF2BP1 (ENSNLEG00000002786) #8	GIP (ENSNLEG00000002767) #9	SNF8 (ENSNLEG00000002743) #10	ENSNLEG00000002739 #12	ATP5MC1 (ENSNLEG00000002718)	CALCOCO2 (ENSNLEG00000002619) #14	TTLL6 (ENSNLEG00000002601) #15	HOXB13 (ENSNLEG00000002594) #16	ENSNLEG00000036120	ENSNLEG00000029075	HOXB6 (ENSNLEG00000002585) #20	HOXB5 (ENSNLEG00000002574) #21	HOXB4 (ENSNLEG00000002570) #22	HOXB2 (ENSNLEG00000002566) #24	ENSNLEG00000018815 #25	SKAP1 (ENSNLEG00000002519) #28	SNX11 (ENSNLEG00000002479) #29	ENSNLEG00000002435 #30	NFE2L1 (ENSNLEG00000002415) #31	ENSNLEG00000002409 #32	ENSNLEG00000002109 #33	PRR15L (ENSNLEG00000002102) #34	PNPO (ENSNLEG00000002062) #35	ENSNLEG00000002058 #36	SP6 (ENSNLEG00000002050) #37	SCRN2 (ENSNLEG00000001940)	LRRC46 (ENSNLEG00000001902)	MRPL10 (ENSNLEG00000001803)
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Vervet Monkey	MODERN SPECIES	7	GNGT2 (ENSCSAG00000002475)	B4GALNT2 (ENSCSAG00000002479) #7	IGF2BP1 (ENSCSAG00000002487) #8	GIP (ENSCSAG00000002491) #9	SNF8 (ENSCSAG00000002494) #10	UBE2Z (ENSCSAG00000002496) #12	ATP5MC1 (ENSCSAG00000002502)	CALCOCO2 (ENSCSAG00000002506) #14	TTLL6 (ENSCSAG00000002511) #15	HOXB13 (ENSCSAG00000002517) #16	HOXB9 (ENSCSAG00000002521) #17	HOXB8 (ENSCSAG00000002523) #18	HOXB7 (ENSCSAG00000002524) #19	HOXB6 (ENSCSAG00000002526) #20	HOXB5 (ENSCSAG00000002529) #21	HOXB4 (ENSCSAG00000002530) #22	HOXB3 (ENSCSAG00000002533) #23	HOXB2 (ENSCSAG00000002536) #24	HOXB1 (ENSCSAG00000002538) #25	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #28	SNX11 (ENSCSAG00000002545) #29	CBX1 (ENSCSAG00000002547) #30	NFE2L1 (ENSCSAG00000002550) #31	COPZ2 (ENSCSAG00000002558) #32	CDK5RAP3 (ENSCSAG00000002562) #33	PRR15L (ENSCSAG00000019042) #34	PNPO (ENSCSAG00000002565) #35	SP2 (ENSCSAG00000002567) #36	SP6 (ENSCSAG00000019041) #37	SCRN2 (ENSCSAG00000002569)
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b.e	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b.e	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00980000199681	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Crab-eating macaque	MODERN SPECIES	7	UBE2Z (ENSMFAG00000045564) #12	ENSMFAG00000037178	ENSMFAG00000055147	CALCOCO2 (ENSMFAG00000000840) #14	ENSMFAG00000030534	ENSMFAG00000059251	TTLL6 (ENSMFAG00000035518) #15	HOXB13 (ENSMFAG00000039799) #16	PRAC1 (ENSMFAG00000039547)	ENSMFAG00000047612	HOXB9 (ENSMFAG00000062545) #17	HOXB8 (ENSMFAG00000033418) #18	HOXB7 (ENSMFAG00000039298) #19	HOXB6 (ENSMFAG00000002294) #20	HOXB5 (ENSMFAG00000042418) #21	HOXB4 (ENSMFAG00000041000) #22	ENSMFAG00000062776	HOXB2 (ENSMFAG00000034146) #24	HOXB1 (ENSMFAG00000052359) #25	SKAP1 (ENSMFAG00000038763) #28	ENSMFAG00000048147	ENSMFAG00000047205	SNX11 (ENSMFAG00000001845) #29	CBX1 (ENSMFAG00000036790) #30	NFE2L1 (ENSMFAG00000035583) #31	COPZ2 (ENSMFAG00000045896) #32	CDK5RAP3 (ENSMFAG00000046364) #33	PRR15L (ENSMFAG00000030161) #34	PNPO (ENSMFAG00000039285) #35	SP2 (ENSMFAG00000038712) #36	ENSMFAG00000052999
Rhesus	MODERN SPECIES	7	IGF2BP1 (ENSMMUG00000011533) #8	GIP (ENSMMUG00000049405) #9	SNF8 (ENSMMUG00000021087) #10	UBE2Z (ENSMMUG00000057164) #12	ATP5MC1 (ENSMMUG00000013395)	ENSMMUG00000016305	TTLL6 (ENSMMUG00000003436) #15	HOXB13 (ENSMMUG00000060879) #16	PRAC1 (ENSMMUG00000053394)	HOXB9 (ENSMMUG00000052505) #17	HOXB8 (ENSMMUG00000020868) #18	HOXB7 (ENSMMUG00000055324) #19	HOXB6 (ENSMMUG00000062283) #20	HOXB5 (ENSMMUG00000051420) #21	ENSMMUG00000045203	HOXB4 (ENSMMUG00000052130) #22	HOXB2 (ENSMMUG00000057001) #24	HOXB1 (ENSMMUG00000022212) #25	SKAP1 (ENSMMUG00000050742) #28	SNX11 (ENSMMUG00000020658) #29	CBX1 (ENSMMUG00000019882) #30	NFE2L1 (ENSMMUG00000021935) #31	COPZ2 (ENSMMUG00000021934) #32	CDK5RAP3 (ENSMMUG00000004760) #33	PRR15L (ENSMMUG00000050551) #34	PNPO (ENSMMUG00000003325) #35	SP2 (ENSMMUG00000004765) #36	ENSMMUG00000053935	SP6 (ENSMMUG00000061952) #37	MRPL10 (ENSMMUG00000021486)	LRRC46 (ENSMMUG00000061605)
Pig-tailed macaque	MODERN SPECIES	494	GIP (ENSMNEG00000042307) #9	SNF8 (ENSMNEG00000032473) #10	UBE2Z (ENSMNEG00000040572) #12	ENSMNEG00000011359	ENSMNEG00000027016	CALCOCO2 (ENSMNEG00000041410) #14	TTLL6 (ENSMNEG00000035034) #15	HOXB13 (ENSMNEG00000036275) #16	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191)	HOXB9 (ENSMNEG00000045476) #17	HOXB8 (ENSMNEG00000034944) #18	HOXB7 (ENSMNEG00000040001) #19	HOXB6 (ENSMNEG00000042554) #20	HOXB5 (ENSMNEG00000039003) #21	HOXB4 (ENSMNEG00000032435) #22	HOXB3 (ENSMNEG00000032425) #23	HOXB2 (ENSMNEG00000043416) #24	HOXB1 (ENSMNEG00000036848) #25	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #28	SNX11 (ENSMNEG00000034920) #29	CBX1 (ENSMNEG00000039720) #30	NFE2L1 (ENSMNEG00000037921) #31	COPZ2 (ENSMNEG00000038720) #32	CDK5RAP3 (ENSMNEG00000029039) #33	PRR15L (ENSMNEG00000028174) #34	PNPO (ENSMNEG00000037010) #35	SP2 (ENSMNEG00000029577) #36	SP6 (ENSMNEG00000023861) #37	SCRN2 (ENSMNEG00000031786)
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Olive baboon	MODERN SPECIES	8	IGF2BP1 (ENSPANG00000022833) #8	GIP (ENSPANG00000022832) #9	SNF8 (ENSPANG00000022831) #10	UBE2Z (ENSPANG00000022830) #12	ATP5MC1 (ENSPANG00000022880)	CALCOCO2 (ENSPANG00000022881) #14	ENSPANG00000049214	TTLL6 (ENSPANG00000022885) #15	HOXB13 (ENSPANG00000048407) #16	PRAC1 (ENSPANG00000034268)	HOXB9 (ENSPANG00000022896) #17	HOXB8 (ENSPANG00000022895) #18	HOXB7 (ENSPANG00000041701) #19	HOXB6 (ENSPANG00000022891) #20	HOXB5 (ENSPANG00000022889) #21	HOXB4 (ENSPANG00000022888) #22	ENSPANG00000045928	HOXB2 (ENSPANG00000034765) #24	HOXB1 (ENSPANG00000022886) #25	SKAP1 (ENSPANG00000022897) #28	ENSPANG00000026200	SNX11 (ENSPANG00000022898) #29	CBX1 (ENSPANG00000022906) #30	NFE2L1 (ENSPANG00000022904) #31	COPZ2 (ENSPANG00000022903) #32	CDK5RAP3 (ENSPANG00000022902) #33	PNPO (ENSPANG00000022924) #35	SP2 (ENSPANG00000022922) #36	SP6 (ENSPANG00000017158) #37	SCRN2 (ENSPANG00000022920)	LRRC46 (ENSPANG00000022918)
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000018696.n	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Sooty mangabey	MODERN SPECIES	564	GIP (ENSCATG00000031593) #9	SNF8 (ENSCATG00000038375) #10	UBE2Z (ENSCATG00000038755) #12	ATP5MC1 (ENSCATG00000030174)	CALCOCO2 (ENSCATG00000007708) #14	ENSCATG00000016293	TTLL6 (ENSCATG00000029768) #15	HOXB13 (ENSCATG00000041758) #16	PRAC1 (ENSCATG00000038550)	HOXB9 (ENSCATG00000002169) #17	HOXB8 (ENSCATG00000025318) #18	HOXB7 (ENSCATG00000042829) #19	HOXB6 (ENSCATG00000043342) #20	HOXB5 (ENSCATG00000027616) #21	HOXB3 (ENSCATG00000031126) #23	HOXB4 (ENSCATG00000040704) #22	HOXB2 (ENSCATG00000035238) #24	HOXB1 (ENSCATG00000035575) #25	SKAP1 (ENSCATG00000044458) #28	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #29	ENSCATG00000034735 ##30	NFE2L1 (ENSCATG00000040775) #31	COPZ2 (ENSCATG00000042708) #32	CDK5RAP3 (ENSCATG00000006699) #33	PRR15L (ENSCATG00000020186) #34	PNPO (ENSCATG00000039934) #35	ENSCATG00000003341 #36	SP6 (ENSCATG00000020123) #37	SCRN2 (ENSCATG00000038846)	LRRC46 (ENSCATG00000031406)
Drill	MODERN SPECIES	1297	ENSMLEG00000043660	GIP (ENSMLEG00000032963) #9	SNF8 (ENSMLEG00000037501) #10	UBE2Z (ENSMLEG00000043345) #12	ATP5MC1 (ENSMLEG00000026746)	CALCOCO2 (ENSMLEG00000034129) #14	TTLL6 (ENSMLEG00000023683) #15	HOXB13 (ENSMLEG00000043860) #16	PRAC1 (ENSMLEG00000033309)	HOXB9 (ENSMLEG00000030602) #17	HOXB8 (ENSMLEG00000007179) #18	HOXB7 (ENSMLEG00000042331) #19	HOXB6 (ENSMLEG00000029580) #20	HOXB5 (ENSMLEG00000009970) #21	HOXB3 (ENSMLEG00000026268) #23	HOXB4 (ENSMLEG00000029897) #22	HOXB2 (ENSMLEG00000031955) #24	HOXB1 (ENSMLEG00000037557) #25	SKAP1 (ENSMLEG00000029308) #28	SNX11 (ENSMLEG00000039008) #29	CBX1 (ENSMLEG00000038745) #30	NFE2L1 (ENSMLEG00000039330) #31	COPZ2 (ENSMLEG00000039090) #32	CDK5RAP3 (ENSMLEG00000033869) #33	PRR15L (ENSMLEG00000020212) #34	PNPO (ENSMLEG00000040872) #35	SP2 (ENSMLEG00000032228) #36	SP6 (ENSMLEG00000027177) #37	SCRN2 (ENSMLEG00000041491)	LRRC46 (ENSMLEG00000031583)	MRPL10 (ENSMLEG00000042780)
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Black snub-nosed monkey	MODERN SPECIES	1661	IGF2BP1 (ENSRBIG00000035739) #8	GIP (ENSRBIG00000039886) #9	SNF8 (ENSRBIG00000038039) #10	UBE2Z (ENSRBIG00000038578) #12	ATP5MC1 (ENSRBIG00000026711)	CALCOCO2 (ENSRBIG00000035235) #14	TTLL6 (ENSRBIG00000035925) #15	HOXB13 (ENSRBIG00000035598) #16	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996)	HOXB9 (ENSRBIG00000035654) #17	HOXB8 (ENSRBIG00000043329) #18	HOXB7 (ENSRBIG00000039896) #19	HOXB6 (ENSRBIG00000029050) #20	HOXB5 (ENSRBIG00000015821) #21	HOXB4 (ENSRBIG00000036141) #22	HOXB3 (ENSRBIG00000036705) #23	HOXB2 (ENSRBIG00000029105) #24	HOXB1 (ENSRBIG00000041849) #25	SKAP1 (ENSRBIG00000042563) #28	SNX11 (ENSRBIG00000030129) #29	ENSRBIG00000027048 #30	NFE2L1 (ENSRBIG00000034817) #31	COPZ2 (ENSRBIG00000038810) #32	CDK5RAP3 (ENSRBIG00000039441) #33	PRR15L (ENSRBIG00000030176) #34	PNPO (ENSRBIG00000042160) #35	SP2 (ENSRBIG00000032526) #36	ENSRBIG00000039530	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000040735
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Cebidae	ANCESTRAL SPECIES	10	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Marmoset	MODERN SPECIES	17	B4GALNT2 (ENSCJAG00000007247) #7	ENSCJAG00000079002	IGF2BP1 (ENSCJAG00000007258) #8	GIP (ENSCJAG00000007300) #9	SNF8 (ENSCJAG00000007322) #10	UBE2Z (ENSCJAG00000007326) #12	ATP5MC1 (ENSCJAG00000075375)	CALCOCO2 (ENSCJAG00000007375) #14	TTLL6 (ENSCJAG00000007395) #15	HOXB13 (ENSCJAG00000007437) #16	HOXB9 (ENSCJAG00000007442) #17	HOXB8 (ENSCJAG00000045730) #18	HOXB7 (ENSCJAG00000007457) #19	HOXB6 (ENSCJAG00000007467) #20	HOXB5 (ENSCJAG00000007472) #21	HOXB4 (ENSCJAG00000007480) #22	HOXB3 (ENSCJAG00000007487) #23	HOXB2 (ENSCJAG00000007494) #24	HOXB1 (ENSCJAG00000007496) #25	ENSCJAG00000038853	SKAP1 (ENSCJAG00000007504) #28	SNX11 (ENSCJAG00000039549) #29	CBX1 (ENSCJAG00000042052) #30	NFE2L1 (ENSCJAG00000007542) #31	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #32	CDK5RAP3 (ENSCJAG00000007669) #33	PRR15L (ENSCJAG00000044487) #34	PNPO (ENSCJAG00000007693) #35	SP2 (ENSCJAG00000007713) #36	SP6 (ENSCJAG00000043946) #37
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00390000005121 #9	ENSGT00390000007843.u.a #10	ENSGT01100000264599 #11	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a.t.b #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT01050000247531	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Bolivian squirrel monkey	MODERN SPECIES	86	GIP (ENSSBOG00000020793) #9	SNF8 (ENSSBOG00000026186) #10	ENSSBOG00000028176 #11	UBE2Z (ENSSBOG00000036224) #12	ENSSBOG00000028794 #13	CALCOCO2 (ENSSBOG00000035276) #14	TTLL6 (ENSSBOG00000028908) #15	HOXB13 (ENSSBOG00000029964) #16	PRAC2 (ENSSBOG00000032603)	ENSSBOG00000030794	HOXB9 (ENSSBOG00000030218) #17	HOXB8 (ENSSBOG00000034884) #18	HOXB7 (ENSSBOG00000020028) #19	HOXB6 (ENSSBOG00000031900) #20	HOXB5 (ENSSBOG00000018198) #21	HOXB4 (ENSSBOG00000024432) #22	HOXB3 (ENSSBOG00000030844) #23	HOXB2 (ENSSBOG00000025070) #24	HOXB1 (ENSSBOG00000034875) #25	ENSSBOG00000019520	SKAP1 (ENSSBOG00000029434) #28	SNX11 (ENSSBOG00000026967) #29	ENSSBOG00000031880 ##30	NFE2L1 (ENSSBOG00000023867) #31	COPZ2 (ENSSBOG00000033633) #32	CDK5RAP3 (ENSSBOG00000033272) #33	PRR15L (ENSSBOG00000019240) #34	PNPO (ENSSBOG00000021213) #35	SP2 (ENSSBOG00000029098) #36	SP6 (ENSSBOG00000014210) #37	SCRN2 (ENSSBOG00000027391)
Capuchin	MODERN SPECIES	228								HOXB13 (ENSCCAG00000036871) #16	ENSCCAG00000036164	ENSCCAG00000019672	HOXB7 (ENSCCAG00000023947) #19	HOXB9 (ENSCCAG00000035938) #17	HOXB8 (ENSCCAG00000026051) #18	HOXB6 (ENSCCAG00000022842) #20	HOXB5 (ENSCCAG00000036867) #21	HOXB4 (ENSCCAG00000020311) #22	HOXB3 (ENSCCAG00000013598) #23	HOXB2 (ENSCCAG00000024035) #24	HOXB1 (ENSCCAG00000027667) #25	ENSCCAG00000019181	SKAP1 (ENSCCAG00000035663) #28	SNX11 (ENSCCAG00000030167) #29	CBX1 (ENSCCAG00000025085) #30	NFE2L1 (ENSCCAG00000029090) #31	COPZ2 (ENSCCAG00000021292) #32	CDK5RAP3 (ENSCCAG00000038053) #33	PNPO (ENSCCAG00000029175) #35	SP2 (ENSCCAG00000038047) #36	SP6 (ENSCCAG00000020330) #37	SCRN2 (ENSCCAG00000031435)	LRRC46 (ENSCCAG00000030568)
Mas night monkey	MODERN SPECIES	481	IGF2BP1 (ENSANAG00000022606) #8	GIP (ENSANAG00000030188) #9	SNF8 (ENSANAG00000032764) #10	UBE2Z (ENSANAG00000029636) #12	ATP5MC1 (ENSANAG00000024881)	ENSANAG00000020581 #14	TTLL6 (ENSANAG00000031133) #15	PRAC2 (ENSANAG00000025557)	HOXB13 (ENSANAG00000023991) #16	ENSANAG00000030331	HOXB9 (ENSANAG00000035156) #17	HOXB8 (ENSANAG00000028346) #18	HOXB7 (ENSANAG00000025513) #19	HOXB6 (ENSANAG00000023964) #20	HOXB5 (ENSANAG00000024299) #21	HOXB4 (ENSANAG00000024005) #22	HOXB3 (ENSANAG00000032072) #23	HOXB2 (ENSANAG00000023626) #24	HOXB1 (ENSANAG00000032306) #25	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #28	SNX11 (ENSANAG00000022588) #29	ENSANAG00000036853 ##30	NFE2L1 (ENSANAG00000027606) #31	COPZ2 (ENSANAG00000023309) #32	CDK5RAP3 (ENSANAG00000021880) #33	PNPO (ENSANAG00000026080) #35	SP2 (ENSANAG00000032738) #36	SP6 (ENSANAG00000019338) #37	SCRN2 (ENSANAG00000021482)	LRRC46 (ENSANAG00000028496)
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590.h #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590.h #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Mouse lemur	MODERN SPECIES	7	B4GALNT2 (ENSMICG00000008596) #7	ENSMICG00000037104	ENSMICG00000013324 #8	GIP (ENSMICG00000013317) #9	SNF8 (ENSMICG00000013305) #10	UBE2Z (ENSMICG00000046102) #12	ENSMICG00000003414 #13	CALCOCO2 (ENSMICG00000015330) #14	TTLL6 (ENSMICG00000007549) #15	HOXB13 (ENSMICG00000007546) #16	HOXB9 (ENSMICG00000038413) #17	HOXB8 (ENSMICG00000045961) #18	HOXB7 (ENSMICG00000007539) #19	HOXB6 (ENSMICG00000042216) #20	HOXB5 (ENSMICG00000047139) #21	HOXB4 (ENSMICG00000043173) #22	HOXB3 (ENSMICG00000007522) #23	HOXB2 (ENSMICG00000038222) #24	HOXB1 (ENSMICG00000048152) #25	SKAP1 (ENSMICG00000047158) #28	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #29	NFE2L1 (ENSMICG00000014716) #31	ENSMICG00000009510 #30	COPZ2 (ENSMICG00000014097) #32	CDK5RAP3 (ENSMICG00000014077) #33	ENSMICG00000014065 #35	SP2 (ENSMICG00000036051) #36	SP6 (ENSMICG00000047695) #37	SCRN2 (ENSMICG00000004823)	LRRC46 (ENSMICG00000004816)
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000159720 #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d.b #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00950000185410	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590.h #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Coquerels sifaka	MODERN SPECIES	120	B4GALNT2 (ENSPCOG00000013984) #7	ENSPCOG00000018672	IGF2BP1 (ENSPCOG00000006475) #8	GIP (ENSPCOG00000024832) #9	SNF8 (ENSPCOG00000026895) #10	UBE2Z (ENSPCOG00000014816) #12	ENSPCOG00000008741 #13	CALCOCO2 (ENSPCOG00000021998) #14	TTLL6 (ENSPCOG00000021391) #15	HOXB13 (ENSPCOG00000018182) #16	HOXB9 (ENSPCOG00000027130) #17	HOXB8 (ENSPCOG00000024853) #18	HOXB7 (ENSPCOG00000028248) #19	HOXB6 (ENSPCOG00000019931) #20	HOXB5 (ENSPCOG00000015692) #21	HOXB4 (ENSPCOG00000022963) #22	HOXB3 (ENSPCOG00000020113) #23	HOXB2 (ENSPCOG00000017380) #24	HOXB1 (ENSPCOG00000025930) #25	SKAP1 (ENSPCOG00000022221) #28	SNX11 (ENSPCOG00000011015) #29	ENSPCOG00000010902 #30	NFE2L1 (ENSPCOG00000021740) #31	COPZ2 (ENSPCOG00000018359) #32	CDK5RAP3 (ENSPCOG00000016598) #33	PNPO (ENSPCOG00000017906) #35	SP2 (ENSPCOG00000017198) #36	SP6 (ENSPCOG00000008529) #37	SCRN2 (ENSPCOG00000014438)	LRRC46 (ENSPCOG00000015829)	MRPL10 (ENSPCOG00000025492)
Greater bamboo lemur	MODERN SPECIES	168			IGF2BP1 (ENSPSMG00000020445) #8	GIP (ENSPSMG00000020432) #9	SNF8 (ENSPSMG00000020426) #10	UBE2Z (ENSPSMG00000020387) #12	ENSPSMG00000020369 #13	CALCOCO2 (ENSPSMG00000020308) #14	ENSPSMG00000020243 #15	HOXB13 (ENSPSMG00000020237) #16	HOXB9 (ENSPSMG00000020232) #17	HOXB8 (ENSPSMG00000020227) #18	HOXB7 (ENSPSMG00000020218) #19	HOXB6 (ENSPSMG00000020209) #20	HOXB5 (ENSPSMG00000020200) #21	HOXB4 (ENSPSMG00000020187) #22	HOXB3 (ENSPSMG00000020182) #23	HOXB2 (ENSPSMG00000020176) #24	HOXB1 (ENSPSMG00000020167) #25	SKAP1 (ENSPSMG00000020161) #28	SNX11 (ENSPSMG00000020139) #29	CBX1 (ENSPSMG00000020119) #30
Bushbaby	MODERN SPECIES	133	B4GALNT2 (ENSOGAG00000003570) #7	IGF2BP1 (ENSOGAG00000001270) #8	GIP (ENSOGAG00000010130) #9	ENSOGAG00000001269 #10	UBE2Z (ENSOGAG00000001267) #12	ATP5MC1 (ENSOGAG00000011713)	CALCOCO2 (ENSOGAG00000011709) #14	TTLL6 (ENSOGAG00000011701) #15	HOXB13 (ENSOGAG00000032643) #16	ENSOGAG00000034464	HOXB9 (ENSOGAG00000008668) #17	HOXB8 (ENSOGAG00000029480) #18	HOXB7 (ENSOGAG00000008667) #19	HOXB6 (ENSOGAG00000008661) #20	HOXB5 (ENSOGAG00000032432) #21	HOXB4 (ENSOGAG00000033709) #22	HOXB3 (ENSOGAG00000032090) #23	HOXB2 (ENSOGAG00000029280) #24	HOXB1 (ENSOGAG00000031645) #25	SKAP1 (ENSOGAG00000015855) #28	SNX11 (ENSOGAG00000015854) #29	CBX1 (ENSOGAG00000005658) #30	NFE2L1 (ENSOGAG00000025191) #31	COPZ2 (ENSOGAG00000004954) #32	CDK5RAP3 (ENSOGAG00000004951) #33	PRR15L (ENSOGAG00000006187) #34	PNPO (ENSOGAG00000006186) #35	SP2 (ENSOGAG00000030380) #36	SP6 (ENSOGAG00000030282) #37	SCRN2 (ENSOGAG00000006181)	LRRC46 (ENSOGAG00000006177)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Afrotheria	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a	ENSGT00940000161315
Elephant	MODERN SPECIES	310	IGF2BP1 (ENSLAFG00000002048) #8	GIP (ENSLAFG00000004536) #9	SNF8 (ENSLAFG00000006599) #10	UBE2Z (ENSLAFG00000006606) #12	ATP5MC1 (ENSLAFG00000004537)	CALCOCO2 (ENSLAFG00000016693) #14	ENSLAFG00000027009	TTLL6 (ENSLAFG00000003368) #15	ENSLAFG00000026602	HOXB13 (ENSLAFG00000011262) #16	HOXB9 (ENSLAFG00000013600) #17	HOXB8 (ENSLAFG00000030682) #18	HOXB7 (ENSLAFG00000030637) #19	HOXB6 (ENSLAFG00000013593) #20	HOXB5 (ENSLAFG00000013590) #21	HOXB4 (ENSLAFG00000013588) #22	HOXB3 (ENSLAFG00000030335) #23	ENSLAFG00000030505	HOXB2 (ENSLAFG00000030161) #24	ENSLAFG00000031610 #25	SKAP1 (ENSLAFG00000018530) #28	SNX11 (ENSLAFG00000018529) #29	CBX1 (ENSLAFG00000018526) #30	NFE2L1 (ENSLAFG00000018523) #31	ENSLAFG00000015209 #32	ENSLAFG00000030284	CDK5RAP3 (ENSLAFG00000000339) #33	PRR15L (ENSLAFG00000015553) #34	PNPO (ENSLAFG00000015550) #35	SP2 (ENSLAFG00000021817) #36	SP6 (ENSLAFG00000010701) #37
Xenarthra	ANCESTRAL SPECIES	1399														ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22
Armadillo	MODERN SPECIES	511													ENSDNOG00000034736	HOXB6 (ENSDNOG00000006841) #20	HOXB5 (ENSDNOG00000042538) #21	HOXB4 (ENSDNOG00000039782) #22	HOXB1 (ENSDNOG00000006826) #25
Marsupialia	ANCESTRAL SPECIES	13	ENSGT01100000263525.b.a	ENSGT00390000006679.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00640000092844	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT01100000263525.b.a	ENSGT00390000006679.b.b #7	ENSGT00940000160427 #8	ENSGT00390000005121 #9	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00640000092844	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00940000161380	ENSGT01100000263525.b.a	ENSGT00390000006679.b.b #7	ENSGT00940000160427 #8	ENSGT00390000007843 #10	ENSGT00940000159091 #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00640000092844	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000161380	ENSGT01100000263525.b.a	ENSGT00390000006679.b.b #7	ENSGT00940000160427 #8	ENSGT00390000007843 #10	ENSGT00940000159091.e #12	ENSGT00940000154298.a.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529 #18	ENSGT00940000161230 #19	ENSGT00940000161108 #20	ENSGT00940000158354 #21	ENSGT00940000162072 #22	ENSGT00940000159774 #23	ENSGT00940000155029.c.b #24	ENSGT00940000159503 #25	ENSGT00390000017856.b #28	ENSGT00940000160113 #29	ENSGT00940000154152.d #30	ENSGT00950000182892.a.b.a.a #31	ENSGT00390000004405.b #32	ENSGT00390000000713 #33	ENSGT00940000154534.a #34	ENSGT00390000011219 #35	ENSGT00640000092844	ENSGT00940000159590 #36	ENSGT00940000161498 #37	ENSGT00390000013474.b.a
Common wonbat	MODERN SPECIES	1037	ZNF652 (ENSVURG00010007816)	PHOSPHO1 (ENSVURG00010007795)	ABI3 (ENSVURG00010007788)	GNGT2 (ENSVURG00010007781)	B4GALNT2 (ENSVURG00010007761) #7	IGF2BP1 (ENSVURG00010007702) #8	SNF8 (ENSVURG00010007691) #10	ENSVURG00010007663 #12	CALCOCO2 (ENSVURG00010007642) #14	HOXB13 (ENSVURG00010007629) #16	HOXB9 (ENSVURG00010007619) #17	HOXB8 (ENSVURG00010007609) #18	HOXB7 (ENSVURG00010007606) #19	HOXB6 (ENSVURG00010007602) #20	HOXB5 (ENSVURG00010007599) #21	HOXB4 (ENSVURG00010007589) #22	HOXB3 (ENSVURG00010007587) #23	HOXB2 (ENSVURG00010007579) #24	HOXB1 (ENSVURG00010007572) #25	SKAP1 (ENSVURG00010007559) #28	SNX11 (ENSVURG00010007541) #29	CBX1 (ENSVURG00010007537) #30	NFE2L1 (ENSVURG00010007465) #31	COPZ2 (ENSVURG00010007430) #32	CDK5RAP3 (ENSVURG00010007403) #33	PRR15L (ENSVURG00010007394) #34	PNPO (ENSVURG00010007376) #35	ENSVURG00010007365	SP2 (ENSVURG00010007347) #36	SP6 (ENSVURG00010007336) #37	SCRN2 (ENSVURG00010007326)
koala	MODERN SPECIES	67	PHOSPHO1 (ENSPCIG00000013107)	ABI3 (ENSPCIG00000013108)	GNGT2 (ENSPCIG00000013109)	B4GALNT2 (ENSPCIG00000003606) #7	IGF2BP1 (ENSPCIG00000013111) #8	SNF8 (ENSPCIG00000013302) #10	ENSPCIG00000013305 #12	ATP5MC1 (ENSPCIG00000013306)	CALCOCO2 (ENSPCIG00000010432) #14	TTLL6 (ENSPCIG00000030247) #15	HOXB13 (ENSPCIG00000030249) #16	HOXB9 (ENSPCIG00000030251) #17	HOXB7 (ENSPCIG00000000064) #19	HOXB6 (ENSPCIG00000000076) #20	HOXB5 (ENSPCIG00000031080) #21	HOXB4 (ENSPCIG00000000195) #22	HOXB3 (ENSPCIG00000000217) #23	HOXB2 (ENSPCIG00000000295) #24	HOXB1 (ENSPCIG00000033449) #25	SKAP1 (ENSPCIG00000000339) #28	SNX11 (ENSPCIG00000000612) #29	CBX1 (ENSPCIG00000000630) #30	NFE2L1 (ENSPCIG00000000720) #31	COPZ2 (ENSPCIG00000000757) #32	CDK5RAP3 (ENSPCIG00000000798) #33	PRR15L (ENSPCIG00000000814) #34	PNPO (ENSPCIG00000000828) #35	ENSPCIG00000000834	SP2 (ENSPCIG00000000843) #36	SP6 (ENSPCIG00000000873) #37	SCRN2 (ENSPCIG00000000883)
Wallaby	MODERN SPECIES	10747																HOXB4 (ENSMEUG00000010931) #22
Opossum	MODERN SPECIES	1	B4GALNT2 (ENSMODG00000012242) #7	ENSMODG00000047325	IGF2BP1 (ENSMODG00000012268) #8	ENSMODG00000028269 #9	SNF8 (ENSMODG00000012276) #10	UBE2Z (ENSMODG00000046619) #12	ENSMODG00000012296 #13	ENSMODG00000029509 #14	ENSMODG00000012306 #14	ENSMODG00000025670 #15	HOXB13 (ENSMODG00000012310) #16	HOXB9 (ENSMODG00000012329) #17	HOXB7 (ENSMODG00000044053) #19	HOXB6 (ENSMODG00000012334) #20	HOXB5 (ENSMODG00000012338) #21	HOXB4 (ENSMODG00000042083) #22	HOXB3 (ENSMODG00000012344) #23	HOXB2 (ENSMODG00000012347) #24	HOXB1 (ENSMODG00000046816) #25	SKAP1 (ENSMODG00000012360) #28	SNX11 (ENSMODG00000051179) #29	CBX1 (ENSMODG00000012368) #30	NFE2L1 (ENSMODG00000012375) #31	COPZ2 (ENSMODG00000012424) #32	CDK5RAP3 (ENSMODG00000012439) #33	PRR15L (ENSMODG00000024090) #34	PNPO (ENSMODG00000012446) #35	ENSMODG00000050066	SP2 (ENSMODG00000012452) #36	SP6 (ENSMODG00000012454) #37	SCRN2 (ENSMODG00000012467)