Rodentia ANCESTRAL SPECIES 3 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000163080 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT01070000257281 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000163080 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Myomorpha ANCESTRAL SPECIES 7 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000163080 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Muroidea ANCESTRAL SPECIES 54 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00940000163080 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Muroidea_A ANCESTRAL SPECIES 15 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Murinae ANCESTRAL SPECIES 8 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Mus ANCESTRAL SPECIES 10 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00950000182803.B.d.a.i.b #30 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Shrew mouse MODERN SPECIES 20 Sptssa (MGP_PahariEiJ_G0029503) #7 Eapp (MGP_PahariEiJ_G0029504) #8 Snx6 (MGP_PahariEiJ_G0029505) #9 Cfl2 (MGP_PahariEiJ_G0029506) #10 Baz1a (MGP_PahariEiJ_G0029507) #11 MGP_PahariEiJ_G0029508 #12 2700097O09Rik (MGP_PahariEiJ_G0029509) #13 MGP_PahariEiJ_G0029510 #14 MGP_PahariEiJ_G0029511 #15 MGP_PahariEiJ_G0029512 #16 Ppp2r3c (MGP_PahariEiJ_G0029513) #17 Prorp (MGP_PahariEiJ_G0029514) #18 Psma6 (MGP_PahariEiJ_G0029515) #19 Nfkbia (MGP_PahariEiJ_G0029516) #20 Aldoart2 (MGP_PahariEiJ_G0029517) #21 Insm2 (MGP_PahariEiJ_G0029518) #22 MGP_PahariEiJ_G0029519 #23 Brms1l (MGP_PahariEiJ_G0029520) #24 Mbip (MGP_PahariEiJ_G0029521) #25 Nkx2-1 (MGP_PahariEiJ_G0029522) #26 Nkx2-9 (MGP_PahariEiJ_G0029523) #27 Pax9 (MGP_PahariEiJ_G0029524) #28 Slc25a21 (MGP_PahariEiJ_G0029525) #29 MGP_PahariEiJ_G0029526 #30 Mipol1 (MGP_PahariEiJ_G0029527) #31 Foxa1 (MGP_PahariEiJ_G0029528) #32 MGP_PahariEiJ_G0029529 #33 Sstr1 (MGP_PahariEiJ_G0029530) #34 Clec14a (MGP_PahariEiJ_G0029531) #35 Sec23a (MGP_PahariEiJ_G0029532) #36 Gemin2 (MGP_PahariEiJ_G0029533) #37 Mus_A ANCESTRAL SPECIES 17 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00950000182803.B.d.a.i.b #30 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Mus_B ANCESTRAL SPECIES 17 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a.d #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00950000182803.B.d.a.i.b #30 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Mus_C ANCESTRAL SPECIES 11 ENSGT00810000125473.B ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00950000182803.B.d.a.i.b #30 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Steppe mouse MODERN SPECIES 2686 ENSMSIG00000018375 #18 ENSMSIG00000018360 Psma6 (ENSMSIG00000018324) #19 Nfkbia (ENSMSIG00000018300) #20 Aldoart2 (ENSMSIG00000018294) #21 Insm2 (ENSMSIG00000018291) #22 Ralgapa1 (ENSMSIG00000017557) #23 Brms1l (ENSMSIG00000017523) #24 spretus MODERN SPECIES 3 Egln3 (MGP_SPRETEiJ_G0018592) Sptssa (MGP_SPRETEiJ_G0018593) #7 Eapp (MGP_SPRETEiJ_G0018594) #8 Snx6 (MGP_SPRETEiJ_G0018595) #9 Cfl2 (MGP_SPRETEiJ_G0018596) #10 Baz1a (MGP_SPRETEiJ_G0018597) #11 MGP_SPRETEiJ_G0018598 #12 MGP_SPRETEiJ_G0018599 #13 MGP_SPRETEiJ_G0018600 #14 Fam177a (MGP_SPRETEiJ_G0018601) #16 Fam177a2 (MGP_SPRETEiJ_G0018602) #16 MGP_SPRETEiJ_G0018603 #18 Psma6 (MGP_SPRETEiJ_G0018604) #19 Nfkbia (MGP_SPRETEiJ_G0018605) #20 Aldoart2 (MGP_SPRETEiJ_G0018606) #21 Insm2 (MGP_SPRETEiJ_G0018607) #22 MGP_SPRETEiJ_G0018608 #23 Brms1l (MGP_SPRETEiJ_G0018609) #24 Mbip (MGP_SPRETEiJ_G0018610) #25 Nkx2-1 (MGP_SPRETEiJ_G0018611) #26 Nkx2-9 (MGP_SPRETEiJ_G0018612) #27 Pax9 (MGP_SPRETEiJ_G0018613) #28 Slc25a21 (MGP_SPRETEiJ_G0018614) #29 MGP_SPRETEiJ_G0018615 #30 Mipol1 (MGP_SPRETEiJ_G0018616) #31 Foxa1 (MGP_SPRETEiJ_G0018617) #32 Ttc6 (MGP_SPRETEiJ_G0018618) Sstr1 (MGP_SPRETEiJ_G0018619) #34 Clec14a (MGP_SPRETEiJ_G0018620) #35 Sec23a (MGP_SPRETEiJ_G0018621) #36 Gemin2 (MGP_SPRETEiJ_G0018622) #37 Mouse MODERN SPECIES 3 Eapp (ENSMUSG00000054302) #8 Snx6 (ENSMUSG00000005656) #9 Cfl2 (ENSMUSG00000062929) #10 Baz1a (ENSMUSG00000035021) #11 2700097O09Rik (ENSMUSG00000062198) #13 Srp54a (ENSMUSG00000073079) #14 Fam177a (ENSMUSG00000095595) #16 Srp54b (ENSMUSG00000112449) #14 Fam177a2 (ENSMUSG00000094103) #16 Srp54c (ENSMUSG00000079108) #14 Ppp2r3c (ENSMUSG00000021022) #17 Prorp (ENSMUSG00000021023) #18 Psma6 (ENSMUSG00000021024) #19 Nfkbia (ENSMUSG00000021025) #20 Aldoart2 (ENSMUSG00000063129) #21 Insm2 (ENSMUSG00000045440) #22 Ralgapa1 (ENSMUSG00000021027) #23 Brms1l (ENSMUSG00000012076) #24 Mbip (ENSMUSG00000021028) #25 Nkx2-1 (ENSMUSG00000001496) #26 Nkx2-9 (ENSMUSG00000058669) #27 Pax9 (ENSMUSG00000001497) #28 Slc25a21 (ENSMUSG00000035472) #29 Prps1l3 (ENSMUSG00000079104) ##30 Mipol1 (ENSMUSG00000047022) #31 Foxa1 (ENSMUSG00000035451) #32 Ttc6 (ENSMUSG00000046782) Sstr1 (ENSMUSG00000035431) #34 Clec14a (ENSMUSG00000045930) #35 Sec23a (ENSMUSG00000020986) #36 Gemin2 (ENSMUSG00000060121) #37 Ryukyu mouse MODERN SPECIES 3 Sptssa (MGP_CAROLIEiJ_G0017747) #7 Eapp (MGP_CAROLIEiJ_G0017748) #8 Snx6 (MGP_CAROLIEiJ_G0017749) #9 Cfl2 (MGP_CAROLIEiJ_G0017750) #10 Baz1a (MGP_CAROLIEiJ_G0017751) #11 MGP_CAROLIEiJ_G0017752 #12 2700097O09Rik (MGP_CAROLIEiJ_G0017753) #13 MGP_CAROLIEiJ_G0017754 #14 MGP_CAROLIEiJ_G0017755 #16 MGP_CAROLIEiJ_G0017756 #16 Ppp2r3c (MGP_CAROLIEiJ_G0017757) #17 Prorp (MGP_CAROLIEiJ_G0017758) #18 Psma6 (MGP_CAROLIEiJ_G0017759) #19 Nfkbia (MGP_CAROLIEiJ_G0017760) #20 Aldoart2 (MGP_CAROLIEiJ_G0017761) #21 Insm2 (MGP_CAROLIEiJ_G0017762) #22 MGP_CAROLIEiJ_G0017763 #23 Brms1l (MGP_CAROLIEiJ_G0017764) #24 Mbip (MGP_CAROLIEiJ_G0017765) #25 Nkx2-1 (MGP_CAROLIEiJ_G0017766) #26 Nkx2-9 (MGP_CAROLIEiJ_G0017767) #27 Pax9 (MGP_CAROLIEiJ_G0017768) #28 Slc25a21 (MGP_CAROLIEiJ_G0017769) #29 MGP_CAROLIEiJ_G0017770 #30 Mipol1 (MGP_CAROLIEiJ_G0017771) #31 Foxa1 (MGP_CAROLIEiJ_G0017772) #32 Ttc6 (MGP_CAROLIEiJ_G0017773) Sstr1 (MGP_CAROLIEiJ_G0017774) #34 Clec14a (MGP_CAROLIEiJ_G0017775) #35 Sec23a (MGP_CAROLIEiJ_G0017776) #36 Gemin2 (MGP_CAROLIEiJ_G0017777) #37 Cricetidae ANCESTRAL SPECIES 17 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Cricetinae ANCESTRAL SPECIES 11 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00900000143527 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Golden Hamster MODERN SPECIES 716 Arhgap5 (ENSMAUG00000008108) Akap6 (ENSMAUG00000014339) Npas3 (ENSMAUG00000001084) Egln3 (ENSMAUG00000012097) Sptssa (ENSMAUG00000014218) #7 Eapp (ENSMAUG00000011998) #8 ENSMAUG00000014794 #9 Cfl2 (ENSMAUG00000000736) #10 Baz1a (ENSMAUG00000012163) #11 ENSMAUG00000014447 #14 ENSMAUG00000010631 #16 Ppp2r3c (ENSMAUG00000016875) #17 Prorp (ENSMAUG00000019281) #18 Psma6 (ENSMAUG00000019916) #19 Nfkbia (ENSMAUG00000006212) #20 Insm2 (ENSMAUG00000003017) #22 Ralgapa1 (ENSMAUG00000013201) #23 ENSMAUG00000009162 Brms1l (ENSMAUG00000020210) #24 ENSMAUG00000012140 Nkx2-1 (ENSMAUG00000019963) #26 Nkx2-9 (ENSMAUG00000020382) #27 Pax9 (ENSMAUG00000009067) #28 Slc25a21 (ENSMAUG00000003076) #29 Mipol1 (ENSMAUG00000008618) #31 Foxa1 (ENSMAUG00000013476) #32 Ttc6 (ENSMAUG00000004751) Clec14a (ENSMAUG00000008282) #35 ENSMAUG00000000784 Sec23a (ENSMAUG00000008174) #36 Gemin2 (ENSMAUG00000017447) #37 Chinese hamster chok1gshd MODERN SPECIES 2 Egln3 (ENSCGRG00001011120) Sptssa (ENSCGRG00001009767) #7 Eapp (ENSCGRG00001019760) #8 Snx6 (ENSCGRG00001015718) #9 Cfl2 (ENSCGRG00001014849) #10 Baz1a (ENSCGRG00001013418) #11 ENSCGRG00001023351 #12 2700097O09Rik (ENSCGRG00001023053) #13 ENSCGRG00001009525 #14 ENSCGRG00001007854 #16 ENSCGRG00001006281 #17 ENSCGRG00001003022 #18 Psma6 (ENSCGRG00001001597) #19 ENSCGRG00001024024 #20 Aldoart2 (ENSCGRG00001002722) #21 Insm2 (ENSCGRG00001024873) #22 Ralgapa1 (ENSCGRG00001024774) #23 ENSCGRG00001024105 Brms1l (ENSCGRG00001022168) #24 Mbip (ENSCGRG00001020947) #25 ENSCGRG00001014830 Nkx2-1 (ENSCGRG00001014035) #26 Nkx2-9 (ENSCGRG00001021293) #27 Pax9 (ENSCGRG00001020784) #28 Slc25a21 (ENSCGRG00001013187) #29 Mipol1 (ENSCGRG00001010153) #31 Foxa1 (ENSCGRG00001007733) #32 ENSCGRG00001006180 Ttc6 (ENSCGRG00001002787) Sstr1 (ENSCGRG00001011700) #34 Clec14a (ENSCGRG00001008667) #35 Cricetidae_B ANCESTRAL SPECIES 44 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00940000172098 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t #19 ENSGT00940000162733 #20 ENSGT00950000182987.c.a.a.o.a #21 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Prairie vole MODERN SPECIES ENSMOCG00000015865 ENSMOCG00000010297 Snx6 (ENSMOCG00000005706) #9 Cfl2 (ENSMOCG00000001143) #10 ENSMOCG00000021225 #11 ENSMOCG00000017192 ENSMOCG00000005425 #12 ENSMOCG00000004049 #13 ENSMOCG00000000948 #14 ENSMOCG00000015069 #16 Ppp2r3c (ENSMOCG00000001928) #17 Prorp (ENSMOCG00000011267) #18 ENSMOCG00000002395 #19 Nfkbia (ENSMOCG00000022242) #20 ENSMOCG00000020598 #21 Insm2 (ENSMOCG00000008493) #22 Ralgapa1 (ENSMOCG00000019684) #23 Brms1l (ENSMOCG00000015451) #24 Mbip (ENSMOCG00000010103) #25 Nkx2-1 (ENSMOCG00000018659) #26 Nkx2-9 (ENSMOCG00000017035) #27 Pax9 (ENSMOCG00000008657) #28 Slc25a21 (ENSMOCG00000013167) #29 Mipol1 (ENSMOCG00000016950) #31 Foxa1 (ENSMOCG00000012361) #32 ENSMOCG00000013226 #33 ENSMOCG00000008283 Sstr1 (ENSMOCG00000018730) #34 Clec14a (ENSMOCG00000001508) #35 ENSMOCG00000015761 Sec23a (ENSMOCG00000004697) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 817 Prorp (ENSNGAG00000013070) #18 Psma6 (ENSNGAG00000010628) #19 ENSNGAG00000009289 Insm2 (ENSNGAG00000000506) #22 Ralgapa1 (ENSNGAG00000020930) #23 Brms1l (ENSNGAG00000002822) #24 ENSNGAG00000019423 Lesser Egyptian jerboa MODERN SPECIES 41 ENSJJAG00000015489 #9 Cfl2 (ENSJJAG00000016196) #10 Baz1a (ENSJJAG00000015816) #11 ENSJJAG00000014755 2700097O09Rik (ENSJJAG00000022781) #13 ENSJJAG00000013417 #14 ENSJJAG00000012947 #16 Ppp2r3c (ENSJJAG00000018280) #17 ENSJJAG00000021340 #18 ENSJJAG00000000913 #19 ENSJJAG00000002334 Insm2 (ENSJJAG00000003814) #22 Ralgapa1 (ENSJJAG00000015267) #23 Brms1l (ENSJJAG00000013865) #24 Mbip (ENSJJAG00000013436) #25 Nkx2-1 (ENSJJAG00000013468) #26 Nkx2-9 (ENSJJAG00000019366) #27 Pax9 (ENSJJAG00000019632) #28 Slc25a21 (ENSJJAG00000019302) #29 ENSJJAG00000021169 Mipol1 (ENSJJAG00000005888) #31 Foxa1 (ENSJJAG00000000995) #32 Ttc6 (ENSJJAG00000015458) ENSJJAG00000021196 Sstr1 (ENSJJAG00000012239) #34 ENSJJAG00000011829 Sec23a (ENSJJAG00000022207) #36 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT01070000257281 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Hystricomorpha ANCESTRAL SPECIES 15 ENSGT00950000182957.a.a.b ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000032861 ENSHGLG00000002049 ENSHGLG00000046910 ##30 EAPP (ENSHGLG00000035378) #8 SNX6 (ENSHGLG00000002236) #9 CFL2 (ENSHGLG00000001467) #10 ENSHGLG00000047884 BAZ1A (ENSHGLG00000007236) #11 ENSHGLG00000000845 #13 SRP54 (ENSHGLG00000002850) #14 FAM177A1 (ENSHGLG00000045828) #16 ENSHGLG00000002301 #17 PRORP (ENSHGLG00000001372) #18 ENSHGLG00000000520 #19 NFKBIA (ENSHGLG00000034266) #20 INSM2 (ENSHGLG00000049957) #22 RALGAPA1 (ENSHGLG00000001193) #23 ENSHGLG00000000511 #24 ENSHGLG00000000299 ENSHGLG00000046807 ENSHGLG00000041160 ENSHGLG00000001972 #25 ENSHGLG00000045119 NKX2-1 (ENSHGLG00000035457) #26 NKX2-8 (ENSHGLG00000001507) #27 PAX9 (ENSHGLG00000002029) #28 ENSHGLG00000001239 #29 PPP1R3E (ENSHGLG00000040376) HOMEZ (ENSHGLG00000004788) BCL2L2 (ENSHGLG00000003433) ENSHGLG00000002927 Hystricomorpha_a ANCESTRAL SPECIES 18 ENSGT00950000182957.a.a.b ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Guinea pig MODERN SPECIES 23 ENSCPOG00000014222 EGLN3 (ENSCPOG00000013369) SPTSSA (ENSCPOG00000038925) #7 ENSCPOG00000003005 #8 SNX6 (ENSCPOG00000006862) #9 CFL2 (ENSCPOG00000033162) #10 BAZ1A (ENSCPOG00000011951) #11 ENSCPOG00000039496 #12 ENSCPOG00000026661 #13 SRP54 (ENSCPOG00000003691) #14 FAM177A1 (ENSCPOG00000035599) #16 PPP2R3C (ENSCPOG00000004781) #17 PRORP (ENSCPOG00000004789) #18 PSMA6 (ENSCPOG00000003107) #19 NFKBIA (ENSCPOG00000005455) #20 INSM2 (ENSCPOG00000013937) #22 RALGAPA1 (ENSCPOG00000013938) #23 BRMS1L (ENSCPOG00000031299) #24 MBIP (ENSCPOG00000004648) #25 NKX2-1 (ENSCPOG00000021321) #26 PAX9 (ENSCPOG00000010951) #28 SLC25A21 (ENSCPOG00000010953) #29 MIPOL1 (ENSCPOG00000015455) #31 ENSCPOG00000009294 SSTR1 (ENSCPOG00000003720) #34 CLEC14A (ENSCPOG00000022515) #35 SEC23A (ENSCPOG00000022376) #36 GEMIN2 (ENSCPOG00000011338) #37 TRAPPC6B (ENSCPOG00000008892) ENSCPOG00000031897 PNN (ENSCPOG00000030068) Hystricomorpha_b ANCESTRAL SPECIES 18 ENSGT00940000158051 ENSGT00950000182957.a.a.b ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b ENSGT00390000013771.cb Degu MODERN SPECIES 127 ENSODEG00000005621 SPTSSA (ENSODEG00000005599) #7 ENSODEG00000005585 #9 CFL2 (ENSODEG00000005560) #10 ENSODEG00000005538 BAZ1A (ENSODEG00000005102) #11 ENSODEG00000004997 #13 SRP54 (ENSODEG00000004865) #14 FAM177A1 (ENSODEG00000004807) #16 PPP2R3C (ENSODEG00000004791) #17 ENSODEG00000004776 PRORP (ENSODEG00000007116) #18 ENSODEG00000007063 #19 NFKBIA (ENSODEG00000007044) #20 ENSODEG00000007033 INSM2 (ENSODEG00000006944) #22 ENSODEG00000006914 RALGAPA1 (ENSODEG00000006389) #23 ENSODEG00000006192 #24 ENSODEG00000006342 MBIP (ENSODEG00000006323) #25 NKX2-1 (ENSODEG00000006215) #26 NKX2-8 (ENSODEG00000006204) #27 ENSODEG00000006188 PAX9 (ENSODEG00000006146) #28 SLC25A21 (ENSODEG00000005898) #29 MIPOL1 (ENSODEG00000005761) #31 FOXA1 (ENSODEG00000005709) #32 TTC6 (ENSODEG00000005629) SSTR1 (ENSODEG00000019331) #34 Long-tailed chinchilla MODERN SPECIES 116 NPAS3 (ENSCLAG00000013939) ENSCLAG00000011029 EGLN3 (ENSCLAG00000010720) ENSCLAG00000012005 EAPP (ENSCLAG00000013007) #8 SNX6 (ENSCLAG00000012353) #9 ENSCLAG00000012876 #10 BAZ1A (ENSCLAG00000015173) #11 ENSCLAG00000012880 #13 SRP54 (ENSCLAG00000015076) #14 FAM177A1 (ENSCLAG00000015226) #16 ENSCLAG00000014794 #17 PRORP (ENSCLAG00000012615) #18 PSMA6 (ENSCLAG00000012840) #19 NFKBIA (ENSCLAG00000011667) #20 INSM2 (ENSCLAG00000011235) #22 RALGAPA1 (ENSCLAG00000009050) #23 BRMS1L (ENSCLAG00000009601) #24 MBIP (ENSCLAG00000010075) #25 NKX2-1 (ENSCLAG00000011429) #26 NKX2-8 (ENSCLAG00000010559) #27 ENSCLAG00000010109 PAX9 (ENSCLAG00000014256) #28 SLC25A21 (ENSCLAG00000010113) #29 MIPOL1 (ENSCLAG00000012585) #31 FOXA1 (ENSCLAG00000018012) #32 TTC6 (ENSCLAG00000010689) SSTR1 (ENSCLAG00000013879) #34 SEC23A (ENSCLAG00000010520) #36 GEMIN2 (ENSCLAG00000008967) #37 TRAPPC6B (ENSCLAG00000009363) Sciuridae ANCESTRAL SPECIES 8 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT01070000257281 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 Marmotini ANCESTRAL SPECIES 15 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00550000074807.d.s.a ##19 ENSGT00940000163080 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Alpin marmot MODERN SPECIES 1 EGLN3 (ENSMMMG00000006788) SPTSSA (ENSMMMG00000006776) #7 ENSMMMG00000006766 EAPP (ENSMMMG00000006761) #8 ENSMMMG00000006742 #9 ENSMMMG00000006738 #9 ENSMMMG00000006731 #10 BAZ1A (ENSMMMG00000006696) #11 ENSMMMG00000006634 #13 SRP54 (ENSMMMG00000006580) #14 FAM177A1 (ENSMMMG00000006572) #16 ENSMMMG00000006558 #17 PRORP (ENSMMMG00000006469) #18 PSMA6 (ENSMMMG00000006439) ##19 ENSMMMG00000006428 INSM2 (ENSMMMG00000006417) #22 RALGAPA1 (ENSMMMG00000005888) #23 BRMS1L (ENSMMMG00000005865) #24 ENSMMMG00000005857 MBIP (ENSMMMG00000005828) #25 ENSMMMG00000005825 #26 NKX2-8 (ENSMMMG00000005805) #27 PAX9 (ENSMMMG00000005784) #28 SLC25A21 (ENSMMMG00000005767) #29 MIPOL1 (ENSMMMG00000005716) #31 FOXA1 (ENSMMMG00000005703) #32 TTC6 (ENSMMMG00000005491) SSTR1 (ENSMMMG00000005443) #34 CLEC14A (ENSMMMG00000005437) #35 SEC23A (ENSMMMG00000005313) #36 ENSMMMG00000005294 #37 Marmotini_b ANCESTRAL SPECIES 108 ENSGT00940000158051 ENSGT00940000158745 ENSGT00390000002766.b.b #7 ENSGT00390000001332 #8 ENSGT00940000154940 #9 ENSGT00950000183000.c.b #10 ENSGT00940000158135 #11 ENSGT00640000092775 #12 ENSGT00390000012799 #13 ENSGT00550000074824 #14 ENSGT00390000016736.a #16 ENSGT00940000155583 #17 ENSGT00390000002201 #18 ENSGT00550000074807.d.t.j #19 ENSGT00940000162733 #20 ENSGT00940000162391 #22 ENSGT00950000183139.B #23 ENSGT00940000158921 #24 ENSGT00510000047831 #25 ENSGT00940000161107 #26 ENSGT00940000161610 #27 ENSGT00940000159896 #28 ENSGT00730000111119 #29 ENSGT00390000017800 #31 ENSGT00940000162043 #32 ENSGT00940000161150 ENSGT00940000161442 #34 ENSGT00930000151088 #35 ENSGT00390000006916.d #36 ENSGT00390000013814 #37 ENSGT00390000012948.b Squirrel MODERN SPECIES 94 EGLN3 (ENSSTOG00000027368) SPTSSA (ENSSTOG00000025158) #7 ENSSTOG00000005273 #8 SNX6 (ENSSTOG00000030590) #9 ENSSTOG00000001675 #10 BAZ1A (ENSSTOG00000012204) #11 ENSSTOG00000027145 #12 ENSSTOG00000024975 #13 SRP54 (ENSSTOG00000016023) #14 FAM177A1 (ENSSTOG00000016027) #16 PPP2R3C (ENSSTOG00000009212) #17 ENSSTOG00000011766 #18 ENSSTOG00000023566 ENSSTOG00000011774 #19 NFKBIA (ENSSTOG00000007587) #20 INSM2 (ENSSTOG00000026540) #22 RALGAPA1 (ENSSTOG00000001249) #23 BRMS1L (ENSSTOG00000026072) #24 ENSSTOG00000034966 MBIP (ENSSTOG00000004226) #25 NKX2-1 (ENSSTOG00000023264) #26 NKX2-8 (ENSSTOG00000015719) #27 PAX9 (ENSSTOG00000015730) #28 SLC25A21 (ENSSTOG00000025764) #29 MIPOL1 (ENSSTOG00000011078) #31 FOXA1 (ENSSTOG00000023537) #32 SSTR1 (ENSSTOG00000026645) #34 CLEC14A (ENSSTOG00000019714) #35 ENSSTOG00000029091 SEC23A (ENSSTOG00000013426) #36 GEMIN2 (ENSSTOG00000006357) #37 Arctic ground squirrel MODERN SPECIES 18 EGLN3 (ENSUPAG00010001862) SPTSSA (ENSUPAG00010001850) #7 ENSUPAG00010001845 EAPP (ENSUPAG00010001833) #8 SNX6 (ENSUPAG00010001786) #9 ENSUPAG00010001776 #10 BAZ1A (ENSUPAG00010001722) #11 ENSUPAG00010001684 #13 SRP54 (ENSUPAG00010001653) #14 FAM177A1 (ENSUPAG00010001644) #16 PPP2R3C (ENSUPAG00010001303) #17 ENSUPAG00010001286 PRORP (ENSUPAG00010001241) #18 PSMA6 (ENSUPAG00010001196) #19 NFKBIA (ENSUPAG00010001173) #20 INSM2 (ENSUPAG00010001161) #22 RALGAPA1 (ENSUPAG00010000544) #23 ENSUPAG00010000520 #24 MBIP (ENSUPAG00010000502) #25 NKX2-1 (ENSUPAG00010000494) #26 NKX2-8 (ENSUPAG00010000486) #27 PAX9 (ENSUPAG00010000467) #28 SLC25A21 (ENSUPAG00010000420) #29 Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005003053 #7 ENSSVLG00005003042 #8 ENSSVLG00005003024 ENSSVLG00005002935 #9 ENSSVLG00005002890 #10 BAZ1A (ENSSVLG00005002845) #11 ENSSVLG00005002806 #13 SRP54 (ENSSVLG00005002707) #14 ENSSVLG00005002677 ENSSVLG00005002666 FAM177A1 (ENSSVLG00005002647) #16 PPP2R3C (ENSSVLG00005002629) #17 PRORP (ENSSVLG00005002581) #18 PSMA6 (ENSSVLG00005002482) #19 NFKBIA (ENSSVLG00005002436) #20 INSM2 (ENSSVLG00005002423) #22 RALGAPA1 (ENSSVLG00005001913) #23 ENSSVLG00005001677 BRMS1L (ENSSVLG00005001649) #24 ENSSVLG00005001633 MBIP (ENSSVLG00005001579) #25 NKX2-1 (ENSSVLG00005001554) #26 NKX2-8 (ENSSVLG00005001540) #27 PAX9 (ENSSVLG00005001528) #28 SLC25A21 (ENSSVLG00005001479) #29 MIPOL1 (ENSSVLG00005001432) #31 FOXA1 (ENSSVLG00005001397) #32 ENSSVLG00005001351 SSTR1 (ENSSVLG00005001318) #34 CLEC14A (ENSSVLG00005001310) #35 ENSSVLG00005001293