Amniota ANCESTRAL SPECIES 7 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT01090000260278 ENSGT00940000161647 #23 ENSGT00940000163195.A ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 Mammalia ANCESTRAL SPECIES 4 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT00940000159083 #37 ENSGT00940000154546 Theria ANCESTRAL SPECIES ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 Eutheria ANCESTRAL SPECIES 1 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Primates ANCESTRAL SPECIES 12 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Mouse lemur MODERN SPECIES 2 PON3 (ENSMICG00000005738) #7 PON2 (ENSMICG00000026757) #8 ASB4 (ENSMICG00000005750) #9 PDK4 (ENSMICG00000005753) #10 DYNC1I1 (ENSMICG00000008899) #11 SLC25A13 (ENSMICG00000008911) #12 SEM1 (ENSMICG00000008928) #13 ENSMICG00000037893 #14 DLX6 (ENSMICG00000014432) #15 ENSMICG00000047116 #16 DLX5 (ENSMICG00000035433) #17 ENSMICG00000036645 #18 ENSMICG00000028247 #19 TAC1 (ENSMICG00000033534) #20 ASNS (ENSMICG00000016357) #21 C1GALT1 (ENSMICG00000011894) #22 COL28A1 (ENSMICG00000032566) #23 MIOS (ENSMICG00000017738) #24 RPA3 (ENSMICG00000000741) #25 UMAD1 (ENSMICG00000035355) #26 GLCCI1 (ENSMICG00000017516) #27 ICA1 (ENSMICG00000017517) #28 NXPH1 (ENSMICG00000017518) #29 ENSMICG00000047415 #30 ENSMICG00000013999 #31 PHF14 (ENSMICG00000014004) #32 THSD7A (ENSMICG00000014021) #33 TMEM106B (ENSMICG00000011835) #34 VWDE (ENSMICG00000011837) #35 ENSMICG00000039717 #36 SCIN (ENSMICG00000029127) #37 Lemuriformes_a ANCESTRAL SPECIES 91 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000002695 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 Greater bamboo lemur MODERN SPECIES 91 PPP1R9A (ENSPSMG00000009393) PON1 (ENSPSMG00000009242) ##8 PON3 (ENSPSMG00000009234) #7 PON2 (ENSPSMG00000009150) #8 ASB4 (ENSPSMG00000009059) #9 PDK4 (ENSPSMG00000009023) #10 DYNC1I1 (ENSPSMG00000008843) #11 SLC25A13 (ENSPSMG00000008670) #12 SEM1 (ENSPSMG00000008611) #13 ENSPSMG00000008588 DLX6 (ENSPSMG00000008565) #15 DLX5 (ENSPSMG00000008549) #17 ENSPSMG00000008537 #18 TAC1 (ENSPSMG00000008520) #20 ASNS (ENSPSMG00000008375) #21 C1GALT1 (ENSPSMG00000008239) #22 COL28A1 (ENSPSMG00000008223) #23 MIOS (ENSPSMG00000008192) #24 RPA3 (ENSPSMG00000008161) #25 UMAD1 (ENSPSMG00000008140) #26 GLCCI1 (ENSPSMG00000008125) #27 ICA1 (ENSPSMG00000008028) #28 NXPH1 (ENSPSMG00000007880) #29 Coquerels sifaka MODERN SPECIES 83 PON1 (ENSPCOG00000018614) ##8 PON3 (ENSPCOG00000026838) #7 PON2 (ENSPCOG00000023699) #8 ASB4 (ENSPCOG00000024006) #9 PDK4 (ENSPCOG00000015783) #10 DYNC1I1 (ENSPCOG00000018842) #11 SLC25A13 (ENSPCOG00000021703) #12 ENSPCOG00000025433 ENSPCOG00000018050 ENSPCOG00000022335 DLX6 (ENSPCOG00000018676) #15 DLX5 (ENSPCOG00000024882) #17 ENSPCOG00000016090 TAC1 (ENSPCOG00000021374) #20 ENSPCOG00000025256 #21 C1GALT1 (ENSPCOG00000015839) #22 ENSPCOG00000018949 COL28A1 (ENSPCOG00000022435) #23 MIOS (ENSPCOG00000011418) #24 RPA3 (ENSPCOG00000022659) #25 UMAD1 (ENSPCOG00000016044) #26 GLCCI1 (ENSPCOG00000008498) #27 ICA1 (ENSPCOG00000003590) #28 NXPH1 (ENSPCOG00000018464) #29 ENSPCOG00000018675 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 120 PPP1R9A (ENSOGAG00000008450) PON1 (ENSOGAG00000008453) ##8 PON3 (ENSOGAG00000008457) #7 PON2 (ENSOGAG00000008461) #8 ASB4 (ENSOGAG00000008468) #9 PDK4 (ENSOGAG00000008470) #10 DYNC1I1 (ENSOGAG00000004652) #11 SLC25A13 (ENSOGAG00000004654) #12 ENSOGAG00000012040 DLX6 (ENSOGAG00000014300) #15 DLX5 (ENSOGAG00000034605) #17 ENSOGAG00000009141 #18 ENSOGAG00000026923 TAC1 (ENSOGAG00000006461) #20 ASNS (ENSOGAG00000002404) #21 ENSOGAG00000012847 #22 COL28A1 (ENSOGAG00000030386) #23 MIOS (ENSOGAG00000008217) #24 ENSOGAG00000001018 #25 GLCCI1 (ENSOGAG00000000041) #27 ICA1 (ENSOGAG00000000042) #28 NXPH1 (ENSOGAG00000007543) #29 ENSOGAG00000004543 ENSOGAG00000026515 ENSOGAG00000000358 ##31 PHF14 (ENSOGAG00000000467) #32 THSD7A (ENSOGAG00000012804) #33 TMEM106B (ENSOGAG00000009729) #34 VWDE (ENSOGAG00000009730) #35 ENSOGAG00000026613 SCIN (ENSOGAG00000007275) #37 Bushbaby MODERN SPECIES 264 ENSOGAG00000009416 ENSOGAG00000032202 WRNIP1 (ENSOGAG00000034332) MYLK4 (ENSOGAG00000009407) ENSOGAG00000030583 #22 GMDS (ENSOGAG00000005955) FOXF2 (ENSOGAG00000005954) ENSOGAG00000033477 HUS1B (ENSOGAG00000033982) EXOC2 (ENSOGAG00000014576) IRF4 (ENSOGAG00000014574) DUSP22 (ENSOGAG00000014570) MARK3 (ENSOGAG00000008270) EIF5 (ENSOGAG00000027506) ENSOGAG00000030713 TNFAIP2 (ENSOGAG00000034813) EXOC3L4 (ENSOGAG00000034162) CDC42BPB (ENSOGAG00000002461) AMN (ENSOGAG00000029773) TRAF3 (ENSOGAG00000002459) Haplorrhini ANCESTRAL SPECIES 8 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Simiiformes ANCESTRAL SPECIES 12 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00830000128380.q.a ENSGT00850000133584 #36 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00910000148269 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000153375.lb.pb.a ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00910000148269 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.k.a #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000153375.lb.pb.a ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00910000148269 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.k.a #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000153375.lb.pb.a ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Macaca ANCESTRAL SPECIES 3 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00910000148269 ENSGT00390000002695 ENSGT00940000163409 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00510000046985.h.b.a.b ENSGT00390000008610.a.b.a.b ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000153095.g.b.a.a.a.b.a.a.b ENSGT00940000154268.f.k.a #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Pig-tailed macaque MODERN SPECIES 534 PON2 (ENSMNEG00000037066) #8 ASB4 (ENSMNEG00000034621) #9 PDK4 (ENSMNEG00000042419) #10 DYNC1I1 (ENSMNEG00000040261) #11 SLC25A13 (ENSMNEG00000031032) #12 ENSMNEG00000045345 ENSMNEG00000045375 ENSMNEG00000029391 DLX6 (ENSMNEG00000041272) #15 DLX5 (ENSMNEG00000021136) #17 ENSMNEG00000031425 #18 ENSMNEG00000030799 TAC1 (ENSMNEG00000040665) #20 ASNS (ENSMNEG00000043217) #21 ENSMNEG00000031471 C1GALT1 (ENSMNEG00000029681) #22 COL28A1 (ENSMNEG00000035662) #23 MIOS (ENSMNEG00000036023) #24 RPA3 (ENSMNEG00000044584) #25 UMAD1 (ENSMNEG00000044071) #26 ENSMNEG00000032658 GLCCI1 (ENSMNEG00000040369) #27 ICA1 (ENSMNEG00000044278) #28 NXPH1 (ENSMNEG00000039744) #29 ENSMNEG00000029668 ENSMNEG00000030955 #31 PHF14 (ENSMNEG00000031850) #32 ENSMNEG00000041084 ENSMNEG00000033652 THSD7A (ENSMNEG00000044846) #33 TMEM106B (ENSMNEG00000030547) #34 Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00910000148269 ENSGT00390000002695 ENSGT00940000163409 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000008610.a.b.a.b ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000153095.g.b.a.a.a.b.a.a.b ENSGT00940000154268.f.k.a #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00390000005569.x.a.a.b Rhesus MODERN SPECIES 13 PON1 (ENSMMUG00000008011) ##8 PON3 (ENSMMUG00000008013) #7 PON2 (ENSMMUG00000008014) #8 ASB4 (ENSMMUG00000008016) #9 PDK4 (ENSMMUG00000021389) #10 DYNC1I1 (ENSMMUG00000005915) #11 SLC25A13 (ENSMMUG00000005250) #12 ENSMMUG00000006974 SEM1 (ENSMMUG00000004127) #13 ENSMMUG00000055860 DLX6 (ENSMMUG00000049169) #15 DLX5 (ENSMMUG00000054481) #17 SDHAF3 (ENSMMUG00000014920) TAC1 (ENSMMUG00000014823) #20 ASNS (ENSMMUG00000019157) #21 C1GALT1 (ENSMMUG00000054913) #22 COL28A1 (ENSMMUG00000040123) #23 MIOS (ENSMMUG00000000853) #24 RPA3 (ENSMMUG00000000854) #25 UMAD1 (ENSMMUG00000042110) #26 GLCCI1 (ENSMMUG00000045449) #27 ICA1 (ENSMMUG00000005435) #28 NXPH1 (ENSMMUG00000009711) #29 ENSMMUG00000053010 NDUFA4 (ENSMMUG00000020894) #31 PHF14 (ENSMMUG00000020895) #32 ENSMMUG00000063606 THSD7A (ENSMMUG00000012694) #33 ENSMMUG00000050638 TMEM106B (ENSMMUG00000005159) #34 VWDE (ENSMMUG00000030278) #35 Crab-eating macaque MODERN SPECIES 13 ASB4 (ENSMFAG00000041748) #9 PDK4 (ENSMFAG00000035180) #10 DYNC1I1 (ENSMFAG00000000094) #11 ENSMFAG00000007583 SLC25A13 (ENSMFAG00000037896) #12 ENSMFAG00000045122 ENSMFAG00000001022 DLX6 (ENSMFAG00000048863) #15 DLX5 (ENSMFAG00000035900) #17 ENSMFAG00000030531 ENSMFAG00000046006 ENSMFAG00000057765 TAC1 (ENSMFAG00000000287) #20 ASNS (ENSMFAG00000041092) #21 ENSMFAG00000055818 C1GALT1 (ENSMFAG00000031532) #22 ENSMFAG00000053535 COL28A1 (ENSMFAG00000000186) #23 MIOS (ENSMFAG00000034560) #24 ENSMFAG00000042056 #25 UMAD1 (ENSMFAG00000052878) #26 GLCCI1 (ENSMFAG00000038435) #27 ICA1 (ENSMFAG00000046093) #28 NXPH1 (ENSMFAG00000032515) #29 ENSMFAG00000040646 ENSMFAG00000050405 ENSMFAG00000053842 ENSMFAG00000057376 NDUFA4 (ENSMFAG00000043193) #31 ENSMFAG00000052316 ENSMFAG00000061241 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.k.a #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000153375.lb.pb.a ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Olive baboon MODERN SPECIES 14 ASB4 (ENSPANG00000017487) #9 PDK4 (ENSPANG00000005011) #10 DYNC1I1 (ENSPANG00000012325) #11 SLC25A13 (ENSPANG00000000583) #12 ENSPANG00000048858 ENSPANG00000016025 ENSPANG00000006248 ENSPANG00000037595 DLX6 (ENSPANG00000045531) #15 DLX5 (ENSPANG00000039520) #17 ENSPANG00000006297 #18 ENSPANG00000040154 TAC1 (ENSPANG00000005012) #20 ASNS (ENSPANG00000020860) #21 ENSPANG00000045543 C1GALT1 (ENSPANG00000003401) #22 COL28A1 (ENSPANG00000022688) #23 MIOS (ENSPANG00000022010) #24 RPA3 (ENSPANG00000050012) #25 ENSPANG00000044583 UMAD1 (ENSPANG00000004767) #26 GLCCI1 (ENSPANG00000005680) #27 ICA1 (ENSPANG00000012997) #28 NXPH1 (ENSPANG00000010257) #29 ENSPANG00000049328 ENSPANG00000044896 ENSPANG00000049975 ENSPANG00000030392 #31 PHF14 (ENSPANG00000007146) #32 ENSPANG00000038105 THSD7A (ENSPANG00000006922) #33 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.k.a #31 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000156923 #32 ENSGT00940000153375.lb.pb.a ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Drill MODERN SPECIES 472 PON2 (ENSMLEG00000027200) #8 ASB4 (ENSMLEG00000036931) #9 PDK4 (ENSMLEG00000037032) #10 DYNC1I1 (ENSMLEG00000042478) #11 SLC25A13 (ENSMLEG00000038932) #12 ENSMLEG00000033727 ENSMLEG00000036598 ENSMLEG00000039568 DLX6 (ENSMLEG00000025971) #15 DLX5 (ENSMLEG00000036746) #17 SDHAF3 (ENSMLEG00000037669) ENSMLEG00000017301 TAC1 (ENSMLEG00000040054) #20 ASNS (ENSMLEG00000028862) #21 ENSMLEG00000032398 C1GALT1 (ENSMLEG00000044453) #22 COL28A1 (ENSMLEG00000015407) #23 MIOS (ENSMLEG00000037819) #24 RPA3 (ENSMLEG00000036302) #25 UMAD1 (ENSMLEG00000042525) #26 GLCCI1 (ENSMLEG00000040012) #27 ICA1 (ENSMLEG00000044079) #28 Sooty mangabey MODERN SPECIES 185 PON2 (ENSCATG00000030239) #8 ASB4 (ENSCATG00000029891) #9 PDK4 (ENSCATG00000031905) #10 DYNC1I1 (ENSCATG00000037835) #11 SLC25A13 (ENSCATG00000029550) #12 ENSCATG00000037610 ENSCATG00000014825 ENSCATG00000041545 DLX6 (ENSCATG00000036157) #15 DLX5 (ENSCATG00000044853) #17 ENSCATG00000032188 #18 ENSCATG00000043998 TAC1 (ENSCATG00000034795) #20 ASNS (ENSCATG00000038317) #21 ENSCATG00000043335 C1GALT1 (ENSCATG00000030704) #22 COL28A1 (ENSCATG00000031059) #23 ENSCATG00000001666 MIOS (ENSCATG00000011011) #24 RPA3 (ENSCATG00000028204) #25 UMAD1 (ENSCATG00000033366) #26 ENSCATG00000030314 GLCCI1 (ENSCATG00000044892) #27 ICA1 (ENSCATG00000043201) #28 NXPH1 (ENSCATG00000037000) #29 ENSCATG00000044948 Vervet Monkey MODERN SPECIES 13 PPP1R9A (ENSCSAG00000012919) PON1 (ENSCSAG00000012943) ##8 PON3 (ENSCSAG00000012950) #7 PON2 (ENSCSAG00000012956) #8 ASB4 (ENSCSAG00000012965) #9 PDK4 (ENSCSAG00000012972) #10 DYNC1I1 (ENSCSAG00000012984) #11 SLC25A13 (ENSCSAG00000012995) #12 ENSCSAG00000013000 SEM1 (ENSCSAG00000013008) #13 DLX6 (ENSCSAG00000013014) #15 DLX5 (ENSCSAG00000013019) #17 ENSCSAG00000013025 #18 TAC1 (ENSCSAG00000013031) #20 ASNS (ENSCSAG00000013037) #21 C1GALT1 (ENSCSAG00000013042) #22 COL28A1 (ENSCSAG00000013070) #23 MIOS (ENSCSAG00000013106) #24 RPA3 (ENSCSAG00000013124) #25 UMAD1 (ENSCSAG00000013129) #26 GLCCI1 (ENSCSAG00000013152) #27 ICA1 (ENSCSAG00000013228) #28 NXPH1 (ENSCSAG00000019119) #29 NDUFA4 (ENSCSAG00000013267) #31 ENSCSAG00000019118 PHF14 (ENSCSAG00000013274) #32 THSD7A (ENSCSAG00000013288) #33 TMEM106B (ENSCSAG00000013296) #34 VWDE (ENSCSAG00000013340) #35 ENSCSAG00000019117 SCIN (ENSCSAG00000013357) #37 Rhinopithecus ANCESTRAL SPECIES 336 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00910000146851.a.a Black snub-nosed monkey MODERN SPECIES 1162 C1GALT1 (ENSRBIG00000042536) #22 COL28A1 (ENSRBIG00000033702) #23 MIOS (ENSRBIG00000035400) #24 RPA3 (ENSRBIG00000040390) #25 UMAD1 (ENSRBIG00000038998) #26 GLCCI1 (ENSRBIG00000038733) #27 ICA1 (ENSRBIG00000029073) #28 ENSRBIG00000031085 Golden snub-nosed monkey MODERN SPECIES 1606 TAC1 (ENSRROG00000039372) #20 ASNS (ENSRROG00000028782) #21 ENSRROG00000043206 C1GALT1 (ENSRROG00000028906) #22 Hominoidea ANCESTRAL SPECIES 6 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994.u #21 ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.u #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.p.a #31 ENSGT00940000154268.f.o #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00830000128380.q.a Hominidae ANCESTRAL SPECIES 11 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994.u #21 ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.u #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.p.a #31 ENSGT00940000154268.f.o #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 25 ENSGT01060000248928.A.b ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.u #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a.a #29 ENSGT00940000154268.f.o #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 Homo/Pan group ANCESTRAL SPECIES 24 ENSGT01060000248928.A.b ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.u #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a.a #29 ENSGT00940000154268.f.o #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 Pan ANCESTRAL SPECIES 25 ENSGT01060000248928.A.b ENSGT00760000119441.b ENSGT00940000155000.u #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.u #25 ENSGT00390000003051 #26 ENSGT00940000155405.kb ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a.a #29 ENSGT00940000162399.d ENSGT00950000183206.b.c.a.b.a.b.c.b ENSGT00940000154268.f.o #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 Bonobo MODERN SPECIES 20 ENSPPAG00000042160 ENSPPAG00000032857 DAGLB (ENSPPAG00000031293) ENSPPAG00000038445 GRID2IP (ENSPPAG00000004060) ZDHHC4 (ENSPPAG00000030859) ENSPPAG00000018724 ENSPPAG00000027476 ZNF853 (ENSPPAG00000036068) ZNF12 (ENSPPAG00000029109) ENSPPAG00000033351 ENSPPAG00000038166 ENSPPAG00000008012 ENSPPAG00000038462 ENSPPAG00000033611 C1GALT1 (ENSPPAG00000029814) #22 ENSPPAG00000010276 COL28A1 (ENSPPAG00000011821) #23 MIOS (ENSPPAG00000027157) #24 RPA3 (ENSPPAG00000037814) #25 UMAD1 (ENSPPAG00000030417) #26 ENSPPAG00000039829 ENSPPAG00000040691 #27 ICA1 (ENSPPAG00000031312) #28 NXPH1 (ENSPPAG00000035580) #29 ENSPPAG00000035236 ENSPPAG00000037083 PHF14 (ENSPPAG00000041166) #32 THSD7A (ENSPPAG00000028160) #33 TMEM106B (ENSPPAG00000030504) #34 ENSPPAG00000036870 Chimpanzee MODERN SPECIES 20 ENSPTRG00000043578 ENSPTRG00000051819 RAC1 (ENSPTRG00000018910) ENSPTRG00000028666 CYTH3 (ENSPTRG00000018907) USP42 (ENSPTRG00000018906) EIF2AK1 (ENSPTRG00000018904) ANKRD61 (ENSPTRG00000018905) AIMP2 (ENSPTRG00000018903) PMS2 (ENSPTRG00000018902) ENSPTRG00000018921 CCZ1 (ENSPTRG00000051931) ENSPTRG00000046263 ENSPTRG00000049642 ENSPTRG00000047119 C1GALT1 (ENSPTRG00000048932) #22 COL28A1 (ENSPTRG00000034434) #23 MIOS (ENSPTRG00000018926) #24 RPA3 (ENSPTRG00000018927) #25 UMAD1 (ENSPTRG00000051077) #26 ENSPTRG00000051825 GLCCI1 (ENSPTRG00000018929) #27 ICA1 (ENSPTRG00000018931) #28 NXPH1 (ENSPTRG00000018932) #29 ENSPTRG00000046649 ENSPTRG00000043057 NDUFA4 (ENSPTRG00000048565) #31 PHF14 (ENSPTRG00000018935) #32 THSD7A (ENSPTRG00000018936) #33 ENSPTRG00000051987 ENSPTRG00000052365 Human MODERN SPECIES 19 USP42 (ENSG00000106346) CYTH3 (ENSG00000008256) FAM220A (ENSG00000178397) SAGSIN1 (ENSG00000286075) RAC1 (ENSG00000136238) DAGLB (ENSG00000164535) KDELR2 (ENSG00000136240) GRID2IP (ENSG00000215045) ZDHHC4 (ENSG00000136247) INTS15 (ENSG00000146576) ZNF853 (ENSG00000236609) ZNF316 (ENSG00000205903) ZNF12 (ENSG00000164631) RSPH10B2 (ENSG00000169402) CCZ1B (ENSG00000146574) C1GALT1 (ENSG00000106392) #22 COL28A1 (ENSG00000215018) #23 MIOS (ENSG00000164654) #24 RPA3 (ENSG00000106399) #25 UMAD1 (ENSG00000219545) #26 GLCCI1 (ENSG00000106415) #27 ICA1 (ENSG00000003147) #28 NXPH1 (ENSG00000122584) #29 NDUFA4 (ENSG00000189043) #31 PHF14 (ENSG00000106443) #32 THSD7A (ENSG00000005108) #33 TMEM106B (ENSG00000106460) #34 VWDE (ENSG00000146530) #35 ENSG00000226690 #36 SCIN (ENSG00000006747) #37 ARL4A (ENSG00000122644) Gorilla MODERN SPECIES 20 CYTH3 (ENSGGOG00000015376) FAM220A (ENSGGOG00000003262) RAC1 (ENSGGOG00000026733) DAGLB (ENSGGOG00000003364) KDELR2 (ENSGGOG00000042815) GRID2IP (ENSGGOG00000008503) INTS15 (ENSGGOG00000026416) ZNF853 (ENSGGOG00000042292) ZNF316 (ENSGGOG00000040823) ZNF12 (ENSGGOG00000037007) ENSGGOG00000036794 ENSGGOG00000043211 ENSGGOG00000002464 ENSGGOG00000036515 ENSGGOG00000037468 C1GALT1 (ENSGGOG00000036533) #22 COL28A1 (ENSGGOG00000010238) #23 MIOS (ENSGGOG00000000652) #24 RPA3 (ENSGGOG00000022464) #25 UMAD1 (ENSGGOG00000008291) #26 ENSGGOG00000024483 ENSGGOG00000011819 #27 ICA1 (ENSGGOG00000007090) #28 NXPH1 (ENSGGOG00000012360) #29 ENSGGOG00000041547 NDUFA4 (ENSGGOG00000001437) #31 PHF14 (ENSGGOG00000006206) #32 THSD7A (ENSGGOG00000008011) #33 ENSGGOG00000036858 TMEM106B (ENSGGOG00000040053) #34 VWDE (ENSGGOG00000006434) #35 Orangutan MODERN SPECIES 20 PPP1R9A (ENSPPYG00000017805) PON1 (ENSPPYG00000017804) ##8 PON3 (ENSPPYG00000017803) #7 PON2 (ENSPPYG00000017802) #8 ASB4 (ENSPPYG00000017801) #9 PDK4 (ENSPPYG00000017799) #10 DYNC1I1 (ENSPPYG00000017798) #11 SLC25A13 (ENSPPYG00000017797) #12 ENSPPYG00000017796 ENSPPYG00000017795 DLX6 (ENSPPYG00000017794) #15 DLX5 (ENSPPYG00000017793) #17 SDHAF3 (ENSPPYG00000017792) TAC1 (ENSPPYG00000017791) #20 ASNS (ENSPPYG00000017790) #21 C1GALT1 (ENSPPYG00000030593) #22 COL28A1 (ENSPPYG00000017789) #23 MIOS (ENSPPYG00000017788) #24 RPA3 (ENSPPYG00000030236) #25 UMAD1 (ENSPPYG00000029638) #26 GLCCI1 (ENSPPYG00000017784) #27 ICA1 (ENSPPYG00000017783) #28 NXPH1 (ENSPPYG00000017782) #29 ENSPPYG00000030557 #31 PHF14 (ENSPPYG00000017779) #32 THSD7A (ENSPPYG00000017778) #33 TMEM106B (ENSPPYG00000017777) #34 VWDE (ENSPPYG00000017776) #35 ENSPPYG00000035665 #36 SCIN (ENSPPYG00000017773) #37 ENSPPYG00000025824 Gibbon MODERN SPECIES 1 PON3 (ENSNLEG00000015766) #7 PON2 (ENSNLEG00000015782) #8 ASB4 (ENSNLEG00000015854) #9 PDK4 (ENSNLEG00000015859) #10 DYNC1I1 (ENSNLEG00000015889) #11 SLC25A13 (ENSNLEG00000015945) #12 ENSNLEG00000015998 ENSNLEG00000016002 ENSNLEG00000032740 DLX6 (ENSNLEG00000016008) #15 ENSNLEG00000016010 #17 SDHAF3 (ENSNLEG00000016014) TAC1 (ENSNLEG00000016015) #20 ASNS (ENSNLEG00000016044) #21 ENSNLEG00000033587 C1GALT1 (ENSNLEG00000016087) #22 COL28A1 (ENSNLEG00000016093) #23 MIOS (ENSNLEG00000016134) #24 RPA3 (ENSNLEG00000033298) #25 UMAD1 (ENSNLEG00000016155) #26 ENSNLEG00000035067 ENSNLEG00000016158 #27 ICA1 (ENSNLEG00000016162) #28 NXPH1 (ENSNLEG00000016182) #29 ENSNLEG00000032207 ENSNLEG00000033241 #31 PHF14 (ENSNLEG00000016184) #32 THSD7A (ENSNLEG00000016197) #33 TMEM106B (ENSNLEG00000016225) #34 VWDE (ENSNLEG00000016235) #35 ENSNLEG00000028754 Catarrhini ANCESTRAL SPECIES 7 ENSGT00940000162984.b.b ENSGT00390000018810 ENSGT00940000161886 ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00950000182976.b.b ENSGT01050000244838.H.c ENSGT00390000009065 ENSGT00390000002743 Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000157724 ENSGT00390000018810 ENSGT00940000161886 ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00950000182976.b.b ENSGT01050000244838.H.c ENSGT00940000155877.i.b ENSGT00390000009065 ENSGT00390000002743 Hominidae ANCESTRAL SPECIES 7 ENSGT00940000157724 ENSGT00390000018810 ENSGT00940000161886 ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00950000182976.b.b ENSGT01050000244838.H.c ENSGT00940000155877.i.b ENSGT00390000009065 ENSGT00390000002743 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00390000018810 ENSGT00940000161886 ENSGT00940000159928 ENSGT00940000159371 ENSGT00950000183104.A.a.b ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00940000154568.q.b ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00910000147652 ENSGT00950000182976.b.b ENSGT01050000244838.H.c Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00390000018810 ENSGT00940000161886 ENSGT00940000159928 ENSGT00940000159371 ENSGT00950000183104.A.a.b ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00940000154568.q.b ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00910000147652 ENSGT00950000182976.b.b ENSGT01050000244838.H.c Pan ANCESTRAL SPECIES 21 ENSGT00940000161886 ENSGT00940000159928 ENSGT00940000159371 ENSGT00950000183104.A.a.b ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00940000154568.q.b ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000158194.d ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00910000147652 ENSGT00950000182976.b.b ENSGT01050000244838.H.c Bonobo MODERN SPECIES 18 GPX8 (ENSPPAG00000035163) CDC20B (ENSPPAG00000040090) MCIDAS (ENSPPAG00000034025) CCNO (ENSPPAG00000027960) DHX29 (ENSPPAG00000041713) MTREX (ENSPPAG00000039291) PLPP1 (ENSPPAG00000041332) ENSPPAG00000039501 ENSPPAG00000032097 SLC38A9 (ENSPPAG00000032086) DDX4 (ENSPPAG00000033915) ENSPPAG00000029811 ENSPPAG00000037145 IL31RA (ENSPPAG00000031467) IL6ST (ENSPPAG00000019428) ENSPPAG00000030322 #22 ANKRD55 (ENSPPAG00000043099) MAP3K1 (ENSPPAG00000036823) SETD9 (ENSPPAG00000022367) MIER3 (ENSPPAG00000043927) GPBP1 (ENSPPAG00000027686) ACTBL2 (ENSPPAG00000013938) PLK2 (ENSPPAG00000040133) GAPT (ENSPPAG00000025071) RAB3C (ENSPPAG00000003265) ENSPPAG00000042968 PDE4D (ENSPPAG00000041704) ENSPPAG00000040693 DEPDC1B (ENSPPAG00000035889) ELOVL7 (ENSPPAG00000042760) ENSPPAG00000040301 Chimpanzee MODERN SPECIES 18 GPX8 (ENSPTRG00000016873) CDC20B (ENSPTRG00000016872) MCIDAS (ENSPTRG00000040660) CCNO (ENSPTRG00000016874) DHX29 (ENSPTRG00000016875) MTREX (ENSPTRG00000016878) ENSPTRG00000041703 PLPP1 (ENSPTRG00000016880) ENSPTRG00000047963 SLC38A9 (ENSPTRG00000016883) DDX4 (ENSPTRG00000016884) ENSPTRG00000047738 ENSPTRG00000048965 IL31RA (ENSPTRG00000016886) IL6ST (ENSPTRG00000016887) ENSPTRG00000018925 #22 ANKRD55 (ENSPTRG00000016888) ENSPTRG00000047789 ENSPTRG00000039819 MAP3K1 (ENSPTRG00000016891) SETD9 (ENSPTRG00000016892) MIER3 (ENSPTRG00000016893) GPBP1 (ENSPTRG00000016894) PLK2 (ENSPTRG00000016896) GAPT (ENSPTRG00000028710) RAB3C (ENSPTRG00000016898) ENSPTRG00000051791 PDE4D (ENSPTRG00000016900) DEPDC1B (ENSPTRG00000016902) ELOVL7 (ENSPTRG00000016903) ENSPTRG00000021940 Gorilla MODERN SPECIES 8 GZMA (ENSGGOG00000017031) GPX8 (ENSGGOG00000012680) CDC20B (ENSGGOG00000025526) MCIDAS (ENSGGOG00000026647) CCNO (ENSGGOG00000009166) DHX29 (ENSGGOG00000001862) MTREX (ENSGGOG00000001867) ENSGGOG00000000661 PLPP1 (ENSGGOG00000001872) ENSGGOG00000001103 SLC38A9 (ENSGGOG00000013482) DDX4 (ENSGGOG00000002439) ENSGGOG00000040613 IL31RA (ENSGGOG00000002985) ENSGGOG00000003727 ENSGGOG00000006588 #22 ANKRD55 (ENSGGOG00000016033) ENSGGOG00000037848 C5orf67 (ENSGGOG00000024041) MAP3K1 (ENSGGOG00000014603) SETD9 (ENSGGOG00000014616) MIER3 (ENSGGOG00000015237) GPBP1 (ENSGGOG00000008390) ACTBL2 (ENSGGOG00000014532) PLK2 (ENSGGOG00000012710) GAPT (ENSGGOG00000012725) RAB3C (ENSGGOG00000013532) ENSGGOG00000041944 PDE4D (ENSGGOG00000006975) DEPDC1B (ENSGGOG00000014855) ELOVL7 (ENSGGOG00000023181) Gibbon MODERN SPECIES 8 GPX8 (ENSNLEG00000001206) MCIDAS (ENSNLEG00000001216) CCNO (ENSNLEG00000001224) DHX29 (ENSNLEG00000001232) MTREX (ENSNLEG00000001494) PLPP1 (ENSNLEG00000001513) ENSNLEG00000001526 ENSNLEG00000033338 SLC38A9 (ENSNLEG00000001529) DDX4 (ENSNLEG00000001662) ENSNLEG00000033054 ENSNLEG00000033964 IL31RA (ENSNLEG00000001947) IL6ST (ENSNLEG00000002075) ANKRD55 (ENSNLEG00000002215) ENSNLEG00000035446 #22 ENSNLEG00000031541 ENSNLEG00000028269 MAP3K1 (ENSNLEG00000002250) SETD9 (ENSNLEG00000002266) MIER3 (ENSNLEG00000002269) GPBP1 (ENSNLEG00000002381) ENSNLEG00000032427 ACTBL2 (ENSNLEG00000018212) PLK2 (ENSNLEG00000002471) RAB3C (ENSNLEG00000002575) PDE4D (ENSNLEG00000002595) ENSNLEG00000034735 ENSNLEG00000030635 DEPDC1B (ENSNLEG00000002677) ELOVL7 (ENSNLEG00000031923) Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000161886 ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000018086.o.a.a.b.b.b.a.a.a ENSGT00940000154568.q.b ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00910000147231 ENSGT00940000155674 ENSGT00950000182976.b.b ENSGT01050000244838.H.c Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000018086.o.a.a.b.b.b.a.a.a ENSGT00940000154568.q.b ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000155000.v #22 ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00910000147231 ENSGT00940000155674 ENSGT00950000182976.b.b ENSGT01050000244838.H.c ENSGT00940000154943.j Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000018086.o.a.a.b.b.b.a.a.a ENSGT00940000154568.q.b ENSGT00390000005646 ENSGT00940000154319.u.b.a.a ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000155000.v #22 ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00910000147231 ENSGT00940000155674 ENSGT00910000147409 ENSGT00940000153877.g.b.a.a ENSGT00950000182976.b.b Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000018086.o.a.a.b.a ENSGT00390000005646 ENSGT00940000154319.u.b.a.a ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000155000.v #22 ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00390000011255 ENSGT00940000157368 ENSGT00940000155674 ENSGT00910000147409 ENSGT00940000153877.g.b.a.a ENSGT00950000182976.b.b ENSGT01050000244838.H.c Cercopithecinae_d ANCESTRAL SPECIES 114 ENSGT00940000161886.c ENSGT00940000159928 ENSGT00950000183104.A.a.b ENSGT00940000159371 ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000157286 ENSGT00940000156183 ENSGT00940000156730 ENSGT00390000018086.o.a.a.b.a ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000155000.v #22 ENSGT01020000230346.C.c.a.a.a.b ENSGT00520000060104 ENSGT00940000159154 ENSGT00390000001437 ENSGT01030000234573.A.b.b.b ENSGT00420000029753.a ENSGT00940000162627 ENSGT00940000158739 ENSGT00940000157368 ENSGT00940000155674 ENSGT00910000147409 ENSGT00940000153877.g.b.a.a ENSGT00950000182976.b.b ENSGT01050000244838.H.c ENSGT00940000154943.j Sooty mangabey MODERN SPECIES 306 SLC38A9 (ENSCATG00000032433) DDX4 (ENSCATG00000044303) IL31RA (ENSCATG00000037994) IL6ST (ENSCATG00000035258) ANKRD55 (ENSCATG00000023651) ENSCATG00000031327 #22 ENSCATG00000032154 ENSCATG00000040313 MAP3K1 (ENSCATG00000041398) SETD9 (ENSCATG00000035590) MIER3 (ENSCATG00000040708) GPBP1 (ENSCATG00000044008) ACTBL2 (ENSCATG00000020128) Drill MODERN SPECIES 1318 ENSMLEG00000029609 #22 ANKRD55 (ENSMLEG00000007285) ENSMLEG00000031370 MAP3K1 (ENSMLEG00000035245) SETD9 (ENSMLEG00000002744) MIER3 (ENSMLEG00000035435) GPBP1 (ENSMLEG00000033927) Vervet Monkey MODERN SPECIES 23 ESM1 (ENSCSAG00000016603) GZMK (ENSCSAG00000016596) GZMA (ENSCSAG00000016590) CDC20B (ENSCSAG00000016579) GPX8 (ENSCSAG00000016558) MCIDAS (ENSCSAG00000016549) CCNO (ENSCSAG00000016535) DHX29 (ENSCSAG00000016510) MTREX (ENSCSAG00000016445) PLPP1 (ENSCSAG00000016379) SLC38A9 (ENSCSAG00000016371) DDX4 (ENSCSAG00000016336) IL31RA (ENSCSAG00000016243) IL6ST (ENSCSAG00000016226) ANKRD55 (ENSCSAG00000016206) ENSCSAG00000016189 #22 MAP3K1 (ENSCSAG00000016180) SETD9 (ENSCSAG00000016168) MIER3 (ENSCSAG00000016165) GPBP1 (ENSCSAG00000016158) PLK2 (ENSCSAG00000016152) ENSCSAG00000016145 GAPT (ENSCSAG00000019002) RAB3C (ENSCSAG00000016140) PDE4D (ENSCSAG00000016138) ENSCSAG00000016129 DEPDC1B (ENSCSAG00000016110) ELOVL7 (ENSCSAG00000016073) ENSCSAG00000016064 ERCC8 (ENSCSAG00000016051) NDUFAF2 (ENSCSAG00000016041) Rhinopithecus ANCESTRAL SPECIES 760 ENSGT00940000155603.A.b ENSGT00940000159608 ENSGT00940000155000.v #22 ENSGT00950000182908.A Black snub-nosed monkey MODERN SPECIES 474 MCIDAS (ENSRBIG00000017306) CCNO (ENSRBIG00000044665) DHX29 (ENSRBIG00000032473) MTREX (ENSRBIG00000034930) PLPP1 (ENSRBIG00000036266) ENSRBIG00000003521 ENSRBIG00000028686 SLC38A9 (ENSRBIG00000028044) ENSRBIG00000033979 DDX4 (ENSRBIG00000028795) ENSRBIG00000015941 IL31RA (ENSRBIG00000015386) ENSRBIG00000036601 ENSRBIG00000039163 ANKRD55 (ENSRBIG00000026624) ENSRBIG00000039375 #22 ENSRBIG00000034921 ENSRBIG00000041568 MAP3K1 (ENSRBIG00000005725) SETD9 (ENSRBIG00000035762) MIER3 (ENSRBIG00000042787) GPBP1 (ENSRBIG00000032152) ENSRBIG00000007002 ACTBL2 (ENSRBIG00000018264) PLK2 (ENSRBIG00000038612) RAB3C (ENSRBIG00000043383) ENSRBIG00000028058 PDE4D (ENSRBIG00000043913) ENSRBIG00000038967 ENSRBIG00000028893 Golden snub-nosed monkey MODERN SPECIES 2579 GPX8 (ENSRROG00000040497) CDC20B (ENSRROG00000039120) MCIDAS (ENSRROG00000037437) CCNO (ENSRROG00000039368) DHX29 (ENSRROG00000044066) MTREX (ENSRROG00000039895) ENSRROG00000022761 PLPP1 (ENSRROG00000040017) SLC38A9 (ENSRROG00000010881) ENSRROG00000042659 DDX4 (ENSRROG00000045392) ENSRROG00000040571 ENSRROG00000036184 IL31RA (ENSRROG00000043638) IL6ST (ENSRROG00000040172) ENSRROG00000038415 #22 ANKRD55 (ENSRROG00000002431) Platyrrhini ANCESTRAL SPECIES 10 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.i.a.a #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Cebidae ANCESTRAL SPECIES 9 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.i.a.a #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Cebidae_a ANCESTRAL SPECIES 7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000002695 ENSGT00940000163409 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155984.b ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.w #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f.i.a.a.a #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Capuchin MODERN SPECIES 37 PON2 (ENSCCAG00000032651) #8 ASB4 (ENSCCAG00000029647) #9 PDK4 (ENSCCAG00000030349) #10 DYNC1I1 (ENSCCAG00000027487) #11 ENSCCAG00000033792 #12 ENSCCAG00000030816 ENSCCAG00000032220 DLX6 (ENSCCAG00000022645) #15 ENSCCAG00000007505 #16 DLX5 (ENSCCAG00000018356) #17 ENSCCAG00000019570 SDHAF3 (ENSCCAG00000029465) TAC1 (ENSCCAG00000022732) #20 ENSCCAG00000032950 #21 ENSCCAG00000008594 C1GALT1 (ENSCCAG00000037539) #22 COL28A1 (ENSCCAG00000034062) #23 MIOS (ENSCCAG00000033208) #24 ENSCCAG00000021943 ENSCCAG00000025095 #25 UMAD1 (ENSCCAG00000028681) #26 GLCCI1 (ENSCCAG00000021860) #27 ICA1 (ENSCCAG00000024119) #28 NXPH1 (ENSCCAG00000001523) #29 ENSCCAG00000007645 #31 PHF14 (ENSCCAG00000021944) #32 THSD7A (ENSCCAG00000028361) #33 TMEM106B (ENSCCAG00000027244) #34 VWDE (ENSCCAG00000035843) #35 ENSCCAG00000035440 #36 SCIN (ENSCCAG00000023458) #37 Bolivian squirrel monkey MODERN SPECIES 44 PDK4 (ENSSBOG00000029811) #10 ENSSBOG00000032883 DYNC1I1 (ENSSBOG00000033850) #11 SLC25A13 (ENSSBOG00000035203) #12 ENSSBOG00000035070 ENSSBOG00000031330 ENSSBOG00000034946 ENSSBOG00000033289 DLX6 (ENSSBOG00000020606) #15 ENSSBOG00000026742 #16 DLX5 (ENSSBOG00000032115) #17 SDHAF3 (ENSSBOG00000031188) TAC1 (ENSSBOG00000031415) #20 ASNS (ENSSBOG00000031816) #21 ENSSBOG00000019705 C1GALT1 (ENSSBOG00000026512) #22 ENSSBOG00000032452 COL28A1 (ENSSBOG00000035682) #23 MIOS (ENSSBOG00000017338) #24 ENSSBOG00000027188 RPA3 (ENSSBOG00000019538) #25 UMAD1 (ENSSBOG00000029436) #26 GLCCI1 (ENSSBOG00000032440) #27 ICA1 (ENSSBOG00000031664) #28 NXPH1 (ENSSBOG00000033774) #29 ENSSBOG00000015022 ENSSBOG00000019517 #31 PHF14 (ENSSBOG00000033689) #32 ENSSBOG00000027959 THSD7A (ENSSBOG00000022829) #33 ARID1A (ENSSBOG00000021791) Marmoset MODERN SPECIES 20 DYNC1I1 (ENSCJAG00000000528) #11 SLC25A13 (ENSCJAG00000000554) #12 ENSCJAG00000042685 ENSCJAG00000076866 ENSCJAG00000043666 ENSCJAG00000080818 ENSCJAG00000075240 ENSCJAG00000076106 DLX6 (ENSCJAG00000085344) #15 DLX5 (ENSCJAG00000000589) #17 SDHAF3 (ENSCJAG00000042876) ENSCJAG00000085680 ENSCJAG00000068961 #20 ASNS (ENSCJAG00000000618) #21 ENSCJAG00000082426 C1GALT1 (ENSCJAG00000057327) #22 COL28A1 (ENSCJAG00000000636) #23 MIOS (ENSCJAG00000000686) #24 RPA3 (ENSCJAG00000085113) #25 ENSCJAG00000083800 UMAD1 (ENSCJAG00000087186) #26 GLCCI1 (ENSCJAG00000047899) #27 ICA1 (ENSCJAG00000000720) #28 ENSCJAG00000086236 ENSCJAG00000070029 NXPH1 (ENSCJAG00000000746) #29 ENSCJAG00000055817 ENSCJAG00000054982 ENSCJAG00000072011 ENSCJAG00000084879 NDUFA4 (ENSCJAG00000045950) #31 Mas night monkey MODERN SPECIES 776 PON3 (ENSANAG00000023332) #7 PON2 (ENSANAG00000031707) #8 ASB4 (ENSANAG00000023999) #9 PDK4 (ENSANAG00000033937) #10 DYNC1I1 (ENSANAG00000027689) #11 SLC25A13 (ENSANAG00000035481) #12 ENSANAG00000036040 ENSANAG00000033458 ENSANAG00000025118 DLX6 (ENSANAG00000003767) #15 ENSANAG00000021116 #16 DLX5 (ENSANAG00000024128) #17 SDHAF3 (ENSANAG00000037083) TAC1 (ENSANAG00000020783) #20 ENSANAG00000030964 #21 C1GALT1 (ENSANAG00000024885) #22 COL28A1 (ENSANAG00000031546) #23 ENSANAG00000037952 MIOS (ENSANAG00000031901) #24 RPA3 (ENSANAG00000021050) #25 UMAD1 (ENSANAG00000035021) #26 GLCCI1 (ENSANAG00000022639) #27 ICA1 (ENSANAG00000037411) #28 NXPH1 (ENSANAG00000021516) #29 ENSANAG00000038257 #31 PHF14 (ENSANAG00000037061) #32 THSD7A (ENSANAG00000022340) #33 TMEM106B (ENSANAG00000018667) #34 VWDE (ENSANAG00000019499) #35 ENSANAG00000000032 #36 SCIN (ENSANAG00000029754) #37 Tarsier MODERN SPECIES 5318 C1GALT1 (ENSTSYG00000003607) #22 COL28A1 (ENSTSYG00000008493) #23 MIOS (ENSTSYG00000010697) #24 RPA3 (ENSTSYG00000026961) #25 ENSTSYG00000036874 Euarchontoglires_A ANCESTRAL SPECIES 17 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F Tree shrew MODERN SPECIES 160 C1GALT1 (ENSTBEG00000001910) #22 Glires ANCESTRAL SPECIES 18 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F Rodentia ANCESTRAL SPECIES 12 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Rodentia_B ANCESTRAL SPECIES 9 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00940000163868 ENSGT00390000005941 Myomorpha ANCESTRAL SPECIES 8 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00940000163868 ENSGT00390000005941 Muroidea ANCESTRAL SPECIES 8 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Cricetidae ANCESTRAL SPECIES 3 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Cricetinae ANCESTRAL SPECIES 23 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 54 Pon3 (ENSCGRG00001017513) #7 Pon2 (ENSCGRG00001017926) #8 Asb4 (ENSCGRG00001002568) #9 Pdk4 (ENSCGRG00001014183) #10 ENSCGRG00001022786 #11 ENSCGRG00001003096 #11 Slc25a13 (ENSCGRG00001024718) #12 ENSCGRG00001023047 Sem1 (ENSCGRG00001000539) #13 ENSCGRG00001016396 Dlx6 (ENSCGRG00001015244) #15 Dlx5 (ENSCGRG00001001362) #17 Sdhaf3 (ENSCGRG00001012553) Tac1 (ENSCGRG00001020738) #20 ASNS (ENSCGRG00001015428) #21 ENSCGRG00001016873 #22 Col28a1 (ENSCGRG00001018669) #23 Mios (ENSCGRG00001022654) #24 Rpa3 (ENSCGRG00001004183) #25 Umad1 (ENSCGRG00001019337) #26 Glcci1 (ENSCGRG00001020867) #27 Ica1 (ENSCGRG00001013759) #28 Nxph1 (ENSCGRG00001017708) #29 ENSCGRG00001004842 ENSCGRG00001013970 Ndufa4 (ENSCGRG00001012421) #31 Phf14 (ENSCGRG00001004536) #32 Thsd7a (ENSCGRG00001021435) #33 Tmem106b (ENSCGRG00001001564) #34 ENSCGRG00001008481 #35 ENSCGRG00001002512 Chinese hamster chok1gshd MODERN SPECIES 175 Usp11 (ENSCGRG00001009349) Cdk16 (ENSCGRG00001017875) Uba1 (ENSCGRG00001020142) Rbm10 (ENSCGRG00001017158) NDUFB11 (ENSCGRG00001008464) ENSCGRG00001018987 Jade3 (ENSCGRG00001006355) Rp2 (ENSCGRG00001007394) ENSCGRG00001021903 Slc9a7 (ENSCGRG00001012807) Chst7 (ENSCGRG00001012203) ENSCGRG00001022909 ENSCGRG00001019537 ENSCGRG00001014501 ENSCGRG00001004486 ENSCGRG00001019439 #22 ENSCGRG00001016398 ENSCGRG00001000706 Dipk2b (ENSCGRG00001024325) Kdm6a (ENSCGRG00001023077) Dusp21 (ENSCGRG00001000819) ENSCGRG00001016563 ENSCGRG00001011048 Efhc2 (ENSCGRG00001004152) Ndp (ENSCGRG00001012325) Maob (ENSCGRG00001012026) Maoa (ENSCGRG00001003371) Gpr82 (ENSCGRG00001008634) Gpr34 (ENSCGRG00001009221) Cask (ENSCGRG00001018099) Nyx (ENSCGRG00001023872) Golden Hamster MODERN SPECIES 756 Peg10 (ENSMAUG00000018656) Ppp1r9a (ENSMAUG00000017217) Pon1 (ENSMAUG00000016513) ##8 Pon3 (ENSMAUG00000007231) #7 Pon2 (ENSMAUG00000019926) #8 Asb4 (ENSMAUG00000017354) #9 Pdk4 (ENSMAUG00000014529) #10 Dync1i1 (ENSMAUG00000012920) #11 Slc25a13 (ENSMAUG00000013308) #12 Sem1 (ENSMAUG00000016213) #13 Dlx6 (ENSMAUG00000017933) #15 Dlx5 (ENSMAUG00000002760) #17 Sdhaf3 (ENSMAUG00000020491) Tac1 (ENSMAUG00000000832) #20 Asns (ENSMAUG00000004155) #21 C1galt1 (ENSMAUG00000011248) #22 Col28a1 (ENSMAUG00000020116) #23 Mios (ENSMAUG00000009947) #24 ENSMAUG00000000402 #25 Umad1 (ENSMAUG00000011521) #26 Glcci1 (ENSMAUG00000009620) #27 ENSMAUG00000008585 #28 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Prairie vole MODERN SPECIES 350 Peg10 (ENSMOCG00000003210) Ppp1r9a (ENSMOCG00000010035) Pon1 (ENSMOCG00000007036) ##8 Pon3 (ENSMOCG00000013174) #7 Pon2 (ENSMOCG00000013410) #8 Asb4 (ENSMOCG00000000254) #9 Pdk4 (ENSMOCG00000011306) #10 Dync1i1 (ENSMOCG00000016558) #11 Slc25a13 (ENSMOCG00000010461) #12 Sem1 (ENSMOCG00000001349) #13 Dlx6 (ENSMOCG00000010083) #15 Dlx5 (ENSMOCG00000021591) #17 Sdhaf3 (ENSMOCG00000004621) Tac1 (ENSMOCG00000014686) #20 Asns (ENSMOCG00000011530) #21 C1galt1 (ENSMOCG00000009499) #22 Col28a1 (ENSMOCG00000012197) #23 Mios (ENSMOCG00000017559) #24 Rpa3 (ENSMOCG00000011090) #25 Umad1 (ENSMOCG00000016635) #26 Glcci1 (ENSMOCG00000011098) #27 ENSMOCG00000019705 #28 ENSMOCG00000008517 #28 Nxph1 (ENSMOCG00000015073) #29 Ndufa4 (ENSMOCG00000021704) #31 Phf14 (ENSMOCG00000016636) #32 ENSMOCG00000008159 Thsd7a (ENSMOCG00000019383) #33 ENSMOCG00000019332 Tmem106b (ENSMOCG00000019810) #34 ENSMOCG00000008088 Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000031065 Ppp1r9a (ENSPEMG00000023259) Pon1 (ENSPEMG00000021811) ##8 Pon3 (ENSPEMG00000029851) #7 Pon2 (ENSPEMG00000022778) #8 Asb4 (ENSPEMG00000021425) #9 Pdk4 (ENSPEMG00000000623) #10 Dync1i1 (ENSPEMG00000009653) #11 Slc25a13 (ENSPEMG00000010195) #12 Sem1 (ENSPEMG00000023151) #13 Dlx6 (ENSPEMG00000003902) #15 Dlx5 (ENSPEMG00000010445) #17 Sdhaf3 (ENSPEMG00000025504) Tac1 (ENSPEMG00000023534) #20 Asns (ENSPEMG00000024254) #21 C1galt1 (ENSPEMG00000001879) #22 Col28a1 (ENSPEMG00000018994) #23 Mios (ENSPEMG00000014859) #24 Rpa3 (ENSPEMG00000028617) #25 ENSPEMG00000025657 Glcci1 (ENSPEMG00000006869) #27 Ica1 (ENSPEMG00000011992) #28 Nxph1 (ENSPEMG00000006871) #29 ENSPEMG00000002763 Ndufa4 (ENSPEMG00000013663) #31 Phf14 (ENSPEMG00000013539) #32 Thsd7a (ENSPEMG00000011896) #33 Tmem106b (ENSPEMG00000010222) #34 Vwde (ENSPEMG00000021059) ENSPEMG00000030634 ENSPEMG00000004158 Murinae ANCESTRAL SPECIES 4 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Mus ANCESTRAL SPECIES 20 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051.c #26 ENSGT00950000183046.b.n #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Mus_B ANCESTRAL SPECIES 20 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.k #25 ENSGT00390000003051.c #26 ENSGT00950000183046.b.n #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Mus_C ANCESTRAL SPECIES 19 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.k #25 ENSGT00390000003051.c #26 ENSGT00950000183046.b.n #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Steppe mouse MODERN SPECIES 3283 ENSMSIG00000003812 C1galt1 (ENSMSIG00000003793) #22 Col28a1 (ENSMSIG00000003650) #23 Mios (ENSMSIG00000003604) #24 Rpa3 (ENSMSIG00000003582) #25 Umad1 (ENSMSIG00000003477) #26 Glcci1 (ENSMSIG00000003405) #27 Ica1 (ENSMSIG00000003216) #28 Nxph1 (ENSMSIG00000003152) #29 Ndufa4 (ENSMSIG00000003100) #31 Phf14 (ENSMSIG00000002959) #32 spretus MODERN SPECIES 15 MGP_SPRETEiJ_G0029078 Ppp1r9a (MGP_SPRETEiJ_G0029079) Pon1 (MGP_SPRETEiJ_G0029080) ##8 MGP_SPRETEiJ_G0029081 #7 Pon2 (MGP_SPRETEiJ_G0029082) #8 Asb4 (MGP_SPRETEiJ_G0029083) #9 Pdk4 (MGP_SPRETEiJ_G0029084) #10 Dync1i1 (MGP_SPRETEiJ_G0029085) #11 Slc25a13 (MGP_SPRETEiJ_G0029086) #12 Sem1 (MGP_SPRETEiJ_G0029087) #13 Dlx6 (MGP_SPRETEiJ_G0029088) #15 Dlx5 (MGP_SPRETEiJ_G0029089) #17 Sdhaf3 (MGP_SPRETEiJ_G0029090) Tac1 (MGP_SPRETEiJ_G0029091) #20 Asns (MGP_SPRETEiJ_G0029092) #21 C1galt1 (MGP_SPRETEiJ_G0029093) #22 Col28a1 (MGP_SPRETEiJ_G0029094) #23 Mios (MGP_SPRETEiJ_G0029095) #24 Rpa3 (MGP_SPRETEiJ_G0029096) #25 Umad1 (MGP_SPRETEiJ_G0029097) #26 MGP_SPRETEiJ_G0029098 #26 Glcci1 (MGP_SPRETEiJ_G0029099) #27 Ica1 (MGP_SPRETEiJ_G0029100) #28 Nxph1 (MGP_SPRETEiJ_G0029101) #29 Ndufa4 (MGP_SPRETEiJ_G0029102) #31 MGP_SPRETEiJ_G0029103 #32 Thsd7a (MGP_SPRETEiJ_G0029104) #33 Tmem106b (MGP_SPRETEiJ_G0029105) #34 Vwde (MGP_SPRETEiJ_G0029106) Tmem168 (MGP_SPRETEiJ_G0029107) Bmt2 (MGP_SPRETEiJ_G0029108) Mouse MODERN SPECIES 15 Peg10 (ENSMUSG00000092035) Ppp1r9a (ENSMUSG00000032827) Pon1 (ENSMUSG00000002588) ##8 Pon3 (ENSMUSG00000029759) #7 Pon2 (ENSMUSG00000032667) #8 Asb4 (ENSMUSG00000042607) #9 Pdk4 (ENSMUSG00000019577) #10 Dync1i1 (ENSMUSG00000029757) #11 Slc25a13 (ENSMUSG00000015112) #12 Sem1 (ENSMUSG00000042541) #13 Dlx6 (ENSMUSG00000029754) #15 Dlx5 (ENSMUSG00000029755) #17 Sdhaf3 (ENSMUSG00000042505) Tac1 (ENSMUSG00000061762) #20 Asns (ENSMUSG00000029752) #21 C1galt1 (ENSMUSG00000042460) #22 Col28a1 (ENSMUSG00000068794) #23 Mios (ENSMUSG00000042447) #24 Rpa3 (ENSMUSG00000012483) #25 Umad1 (ENSMUSG00000089862) #26 Glcci1 (ENSMUSG00000029638) #27 Ica1 (ENSMUSG00000062995) #28 Nxph1 (ENSMUSG00000046178) #29 Ndufa4 (ENSMUSG00000029632) #31 Phf14 (ENSMUSG00000029629) #32 Thsd7a (ENSMUSG00000032625) #33 Tmem106b (ENSMUSG00000029571) #34 Vwde (ENSMUSG00000079679) Tmem168 (ENSMUSG00000029569) Bmt2 (ENSMUSG00000042742) Gpr85 (ENSMUSG00000048216) Ryukyu mouse MODERN SPECIES 15 MGP_CAROLIEiJ_G0028078 Ppp1r9a (MGP_CAROLIEiJ_G0028079) Pon1 (MGP_CAROLIEiJ_G0028080) ##8 Pon3 (MGP_CAROLIEiJ_G0028081) #7 Pon2 (MGP_CAROLIEiJ_G0028082) #8 Asb4 (MGP_CAROLIEiJ_G0028083) #9 Pdk4 (MGP_CAROLIEiJ_G0028084) #10 Dync1i1 (MGP_CAROLIEiJ_G0028085) #11 MGP_CAROLIEiJ_G0028086 #12 Sem1 (MGP_CAROLIEiJ_G0028087) #13 Dlx6 (MGP_CAROLIEiJ_G0028088) #15 Dlx5 (MGP_CAROLIEiJ_G0028089) #17 Sdhaf3 (MGP_CAROLIEiJ_G0028090) Tac1 (MGP_CAROLIEiJ_G0028091) #20 Asns (MGP_CAROLIEiJ_G0028092) #21 C1galt1 (MGP_CAROLIEiJ_G0028093) #22 Col28a1 (MGP_CAROLIEiJ_G0028094) #23 Mios (MGP_CAROLIEiJ_G0028095) #24 Rpa3 (MGP_CAROLIEiJ_G0028096) #25 Umad1 (MGP_CAROLIEiJ_G0028097) #26 MGP_CAROLIEiJ_G0028098 #26 Glcci1 (MGP_CAROLIEiJ_G0028099) #27 Ica1 (MGP_CAROLIEiJ_G0028100) #28 Nxph1 (MGP_CAROLIEiJ_G0028101) #29 Ndufa4 (MGP_CAROLIEiJ_G0028102) #31 MGP_CAROLIEiJ_G0028103 #32 MGP_CAROLIEiJ_G0028104 #33 Tmem106b (MGP_CAROLIEiJ_G0028105) #34 Vwde (MGP_CAROLIEiJ_G0028106) MGP_CAROLIEiJ_G0028107 Bmt2 (MGP_CAROLIEiJ_G0028108) Shrew mouse MODERN SPECIES 11 Sgce (MGP_PahariEiJ_G0021833) MGP_PahariEiJ_G0021834 Ppp1r9a (MGP_PahariEiJ_G0021835) Pon1 (MGP_PahariEiJ_G0021836) ##8 Pon3 (MGP_PahariEiJ_G0021837) #7 Pon2 (MGP_PahariEiJ_G0021838) #8 Asb4 (MGP_PahariEiJ_G0021839) #9 Pdk4 (MGP_PahariEiJ_G0021840) #10 Dync1i1 (MGP_PahariEiJ_G0021841) #11 Slc25a13 (MGP_PahariEiJ_G0021842) #12 Sem1 (MGP_PahariEiJ_G0021843) #13 Dlx6 (MGP_PahariEiJ_G0021844) #15 Dlx5 (MGP_PahariEiJ_G0021845) #17 Tac1 (MGP_PahariEiJ_G0021847) #20 Asns (MGP_PahariEiJ_G0021848) #21 C1galt1 (MGP_PahariEiJ_G0021849) #22 Col28a1 (MGP_PahariEiJ_G0021850) #23 Mios (MGP_PahariEiJ_G0021851) #24 Rpa3 (MGP_PahariEiJ_G0021852) #25 MGP_PahariEiJ_G0021853 #26 MGP_PahariEiJ_G0021854 #26 Glcci1 (MGP_PahariEiJ_G0021855) #27 Ica1 (MGP_PahariEiJ_G0021856) #28 Nxph1 (MGP_PahariEiJ_G0021857) #29 Ndufa4 (MGP_PahariEiJ_G0021858) #31 MGP_PahariEiJ_G0021859 #32 Thsd7a (MGP_PahariEiJ_G0021860) #33 Tmem106b (MGP_PahariEiJ_G0021861) #34 Vwde (MGP_PahariEiJ_G0021862) MGP_PahariEiJ_G0021863 Bmt2 (MGP_PahariEiJ_G0021864) Rat MODERN SPECIES 14 Pon2 (ENSRNOG00000009112) #8 Asb4 (ENSRNOG00000009197) #9 ENSRNOG00000069335 Pdk4 (ENSRNOG00000009565) #10 AC095825.1 (ENSRNOG00000033695) Dync1i1 (ENSRNOG00000009700) #11 Slc25a13 (ENSRNOG00000009957) #12 LOC108350671 (ENSRNOG00000064781) Sem1 (ENSRNOG00000010420) #13 Dlx6 (ENSRNOG00000063630) #15 ENSRNOG00000068262 Dlx5 (ENSRNOG00000010905) #17 Sdhaf3 (ENSRNOG00000011283) Asns (ENSRNOG00000007546) #21 Polr1d-ps1 (ENSRNOG00000065557) C1galt1 (ENSRNOG00000007804) #22 Col28a1 (ENSRNOG00000033618) #23 Mios (ENSRNOG00000007924) #24 Rpa3 (ENSRNOG00000008309) #25 Glcci1 (ENSRNOG00000008524) #27 Ica1 (ENSRNOG00000008628) #28 Nxph1 (ENSRNOG00000008939) #29 Rps4x-ps9 (ENSRNOG00000029574) LOC500028 (ENSRNOG00000008962) ENSRNOG00000065391 LOC680964 (ENSRNOG00000047566) ENSRNOG00000066267 Ndufa4 (ENSRNOG00000005512) #31 Phf14 (ENSRNOG00000005775) #32 Thsd7a (ENSRNOG00000030151) #33 ENSRNOG00000068666 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1733 Dync1i1 (ENSNGAG00000010254) #11 Slc25a13 (ENSNGAG00000004196) #12 Sem1 (ENSNGAG00000004905) #13 Dlx6 (ENSNGAG00000023627) #15 Dlx5 (ENSNGAG00000013507) #17 Sdhaf3 (ENSNGAG00000019837) Tac1 (ENSNGAG00000013565) #20 Asns (ENSNGAG00000015284) #21 ENSNGAG00000013857 #22 Col28a1 (ENSNGAG00000003512) #23 ENSNGAG00000001986 #24 Rpa3 (ENSNGAG00000023730) #25 Upper Galilee mountains blind mole rat MODERN SPECIES 1305 Synj2bp (ENSNGAG00000000372) Slc8a3 (ENSNGAG00000012470) Smoc1 (ENSNGAG00000015576) ENSNGAG00000017896 Slc10a1 (ENSNGAG00000000483) ENSNGAG00000010073 Susd6 (ENSNGAG00000012111) Ccdc177 (ENSNGAG00000009965) Plekhd1 (ENSNGAG00000016035) Slc39a9 (ENSNGAG00000013326) ENSNGAG00000001169 Galnt16 (ENSNGAG00000006889) ENSNGAG00000012980 ENSNGAG00000018313 ENSNGAG00000022907 #22 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 59 Pon1 (ENSJJAG00000019417) ##8 Pon3 (ENSJJAG00000014617) #7 Pon2 (ENSJJAG00000014340) #8 Asb4 (ENSJJAG00000014914) #9 Pdk4 (ENSJJAG00000006344) #10 Dync1i1 (ENSJJAG00000005705) #11 Slc25a13 (ENSJJAG00000013214) #12 Sem1 (ENSJJAG00000021778) #13 ENSJJAG00000021424 Dlx6 (ENSJJAG00000009741) #15 Dlx5 (ENSJJAG00000021396) #17 Sdhaf3 (ENSJJAG00000008045) Tac1 (ENSJJAG00000013765) #20 ENSJJAG00000011602 Asns (ENSJJAG00000011697) #21 ENSJJAG00000024015 #22 Col28a1 (ENSJJAG00000022460) #23 Mios (ENSJJAG00000020004) #24 Rpa3 (ENSJJAG00000005379) #25 ENSJJAG00000022866 Umad1 (ENSJJAG00000021097) #26 ENSJJAG00000024066 #27 ENSJJAG00000021248 #28 Nxph1 (ENSJJAG00000020417) #29 ENSJJAG00000005425 Kcnk9 (ENSJJAG00000018506) ENSJJAG00000015586 ENSJJAG00000022433 ENSJJAG00000012056 Khdrbs3 (ENSJJAG00000011049) Zfat (ENSJJAG00000024033) Lesser Egyptian jerboa MODERN SPECIES 60 Cdc14b (ENSJJAG00000002103) ENSJJAG00000024373 ENSJJAG00000011401 Fam240b (ENSJJAG00000019963) Cntnap3 (ENSJJAG00000006453) ENSJJAG00000022665 ENSJJAG00000018543 Ddx11 (ENSJJAG00000018162) Ndufv2 (ENSJJAG00000016857) Ankrd12 (ENSJJAG00000020013) Twsg1 (ENSJJAG00000017095) Ralbp1 (ENSJJAG00000017102) Ppp4r1 (ENSJJAG00000010207) Rab31 (ENSJJAG00000000852) Vapa (ENSJJAG00000015092) ENSJJAG00000021508 #22 ENSJJAG00000000714 Apcdd1 (ENSJJAG00000018207) Napg (ENSJJAG00000016803) Piezo2 (ENSJJAG00000013995) Gnal (ENSJJAG00000020838) Mppe1 (ENSJJAG00000014441) Impa2 (ENSJJAG00000023477) Cidea (ENSJJAG00000016520) Tubb6 (ENSJJAG00000009769) Afg3l2 (ENSJJAG00000016976) Prelid3a (ENSJJAG00000023520) Spire1 (ENSJJAG00000003604) Cep76 (ENSJJAG00000021669) Psmg2 (ENSJJAG00000020914) ENSJJAG00000000904 Kangaroo rat MODERN SPECIES 367 Tac1 (ENSDORG00000002115) #20 Asns (ENSDORG00000000408) #21 C1galt1 (ENSDORG00000000105) #22 Mios (ENSDORG00000008159) #24 ENSDORG00000006043 #27 Ica1 (ENSDORG00000006045) #28 Nxph1 (ENSDORG00000011457) #29 Ndufa4 (ENSDORG00000026556) #31 ENSDORG00000023739 Phf14 (ENSDORG00000015520) #32 Thsd7a (ENSDORG00000010842) #33 Tmem106b (ENSDORG00000007476) #34 ENSDORG00000012385 Tmem168 (ENSDORG00000024855) Bmt2 (ENSDORG00000024427) Gpr85 (ENSDORG00000025306) Ppp1r3a (ENSDORG00000023629) Foxp2 (ENSDORG00000007040) Rodentia_A ANCESTRAL SPECIES 12 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Hystricomorpha ANCESTRAL SPECIES 14 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b.l #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT00390000005941 ENSGT00390000010382 Hystricomorpha_a ANCESTRAL SPECIES 43 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b.l #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT00390000005941 ENSGT00390000010382 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 11 ENSCPOG00000010259 PON1 (ENSCPOG00000037806) ##8 PON3 (ENSCPOG00000039258) #7 PON2 (ENSCPOG00000007257) #8 ASB4 (ENSCPOG00000014245) #9 PDK4 (ENSCPOG00000033399) #10 ENSCPOG00000037546 #11 ENSCPOG00000011054 #11 SLC25A13 (ENSCPOG00000013200) #12 SEM1 (ENSCPOG00000035520) #13 DLX6 (ENSCPOG00000001795) #15 DLX5 (ENSCPOG00000001796) #17 SDHAF3 (ENSCPOG00000014057) TAC1 (ENSCPOG00000011245) #20 ENSCPOG00000009841 #21 ENSCPOG00000033504 #22 COL28A1 (ENSCPOG00000021196) #23 MIOS (ENSCPOG00000011743) #24 RPA3 (ENSCPOG00000036936) #25 UMAD1 (ENSCPOG00000030933) #26 GLCCI1 (ENSCPOG00000037962) #27 ICA1 (ENSCPOG00000021862) #28 NXPH1 (ENSCPOG00000006994) #29 NDUFA4 (ENSCPOG00000036788) ##31 PHF14 (ENSCPOG00000002218) #32 ENSCPOG00000040423 THSD7A (ENSCPOG00000000279) #33 TMEM106B (ENSCPOG00000038943) #34 VWDE (ENSCPOG00000005082) #35 TMEM168 (ENSCPOG00000011647) BMT2 (ENSCPOG00000014132) Guinea pig MODERN SPECIES 20 DNAL1 (ENSCPOG00000010655) ACOT6 (ENSCPOG00000032534) ACOT4 (ENSCPOG00000036993) HEATR4 (ENSCPOG00000001833) ENSCPOG00000038505 RIOX1 (ENSCPOG00000024797) NUMB (ENSCPOG00000034984) PAPLN (ENSCPOG00000019279) PSEN1 (ENSCPOG00000035027) RBM25 (ENSCPOG00000002479) ZFYVE1 (ENSCPOG00000013880) ENSCPOG00000013878 DPF3 (ENSCPOG00000007322) RGS6 (ENSCPOG00000007309) SIPA1L1 (ENSCPOG00000013071) ENSCPOG00000033708 #22 PCNX1 (ENSCPOG00000001806) MAP3K9 (ENSCPOG00000001803) TTC9 (ENSCPOG00000001801) MED6 (ENSCPOG00000012529) ENSCPOG00000026757 SYNJ2BP (ENSCPOG00000023967) COX16 (ENSCPOG00000038104) SLC8A3 (ENSCPOG00000008979) SMOC1 (ENSCPOG00000008973) SLC10A1 (ENSCPOG00000005950) SRSF5 (ENSCPOG00000039926) SUSD6 (ENSCPOG00000039357) CCDC177 (ENSCPOG00000034151) PLEKHD1 (ENSCPOG00000034276) SLC39A9 (ENSCPOG00000038743) Hystricomorpha_b ANCESTRAL SPECIES 62 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b.l #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT00390000005941 ENSGT00390000010382 Degu MODERN SPECIES 275 TAC1 (ENSODEG00000000835) #20 ENSODEG00000000846 ENSODEG00000000860 ENSODEG00000000873 #21 C1GALT1 (ENSODEG00000000888) #22 COL28A1 (ENSODEG00000000965) #23 ENSODEG00000001444 ENSODEG00000001473 #24 ENSODEG00000001526 RPA3 (ENSODEG00000001607) #25 UMAD1 (ENSODEG00000001683) #26 ENSODEG00000001744 #27 ENSODEG00000001364 #28 ENSODEG00000001385 #28 ENSODEG00000018727 NXPH1 (ENSODEG00000001425) #29 Long-tailed chinchilla MODERN SPECIES 139 PPP1R9A (ENSCLAG00000008731) PON1 (ENSCLAG00000009506) ##8 PON3 (ENSCLAG00000009609) #7 PON2 (ENSCLAG00000009728) #8 ASB4 (ENSCLAG00000009834) #9 PDK4 (ENSCLAG00000017289) #10 DYNC1I1 (ENSCLAG00000006396) #11 SLC25A13 (ENSCLAG00000002917) #12 SEM1 (ENSCLAG00000002949) #13 DLX6 (ENSCLAG00000002971) #15 DLX5 (ENSCLAG00000002987) #17 SDHAF3 (ENSCLAG00000003011) TAC1 (ENSCLAG00000003086) #20 ENSCLAG00000003157 #21 ENSCLAG00000003237 #21 C1GALT1 (ENSCLAG00000003286) #22 COL28A1 (ENSCLAG00000003344) #23 MIOS (ENSCLAG00000003461) #24 RPA3 (ENSCLAG00000003500) #25 UMAD1 (ENSCLAG00000003569) #26 GLCCI1 (ENSCLAG00000003639) #27 ICA1 (ENSCLAG00000003729) #28 NXPH1 (ENSCLAG00000003986) #29 NDUFA4 (ENSCLAG00000004050) #31 PHF14 (ENSCLAG00000004153) #32 THSD7A (ENSCLAG00000003554) #33 TMEM106B (ENSCLAG00000003761) #34 ENSCLAG00000003804 ENSCLAG00000003855 BMT2 (ENSCLAG00000003902) ENSCLAG00000003944 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 5 PON3 (ENSHGLG00000003028) #7 PON2 (ENSHGLG00000044448) #8 ASB4 (ENSHGLG00000000818) #9 PDK4 (ENSHGLG00000044007) #10 DYNC1I1 (ENSHGLG00000000924) #11 ENSHGLG00000000847 ENSHGLG00000008153 SLC25A13 (ENSHGLG00000001078) #12 SEM1 (ENSHGLG00000001228) #13 DLX6 (ENSHGLG00000036463) #15 DLX5 (ENSHGLG00000035624) #17 ENSHGLG00000003962 ACN9 (ENSHGLG00000001283) TAC1 (ENSHGLG00000001397) #20 ENSHGLG00000001445 #21 ENSHGLG00000001496 #22 ENSHGLG00000001565 #23 ENSHGLG00000001680 MIOS (ENSHGLG00000001710) #24 ENSHGLG00000039732 #25 ENSHGLG00000037539 #26 ENSHGLG00000034935 ENSHGLG00000002785 GLCCI1 (ENSHGLG00000002931) #27 ICA1 (ENSHGLG00000003048) #28 ENSHGLG00000038096 ENSHGLG00000036107 ENSHGLG00000045635 ENSHGLG00000033082 #29 ENSHGLG00000048374 ENSHGLG00000003236 Naked mole-rat female MODERN SPECIES 20 DCAF8 (ENSHGLG00000009593) PEX19 (ENSHGLG00000006365) COPA (ENSHGLG00000011307) NCSTN (ENSHGLG00000007191) NHLH1 (ENSHGLG00000020397) VANGL2 (ENSHGLG00000015020) ENSHGLG00000044874 ENSHGLG00000040731 CD84 (ENSHGLG00000018167) ENSHGLG00000036722 SLAMF1 (ENSHGLG00000013870) CD48 (ENSHGLG00000016645) ENSHGLG00000046741 CD244 (ENSHGLG00000016536) ENSHGLG00000049342 ENSHGLG00000048048 #22 ENSHGLG00000015520 ENSHGLG00000038623 TSTD1 (ENSHGLG00000035841) USF1 (ENSHGLG00000012402) ARHGAP30 (ENSHGLG00000006495) NECTIN4 (ENSHGLG00000010781) KLHDC9 (ENSHGLG00000008070) PFDN2 (ENSHGLG00000034237) NIT1 (ENSHGLG00000010991) DEDD (ENSHGLG00000032371) UFC1 (ENSHGLG00000011578) USP21 (ENSHGLG00000017443) PPOX (ENSHGLG00000014872) B4GALT3 (ENSHGLG00000011414) ADAMTS4 (ENSHGLG00000009213) Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000043426 ENSHGLG00000007928 ENSHGLG00000046018 AMER3 (ENSHGLG00000034065) ENSHGLG00000012881 ENSHGLG00000032060 FAM168B (ENSHGLG00000049252) ENSHGLG00000015684 ENSHGLG00000014840 ENSHGLG00000005180 ENSHGLG00000049887 ENSHGLG00000037717 ENSHGLG00000047580 ENSHGLG00000036357 ARL6IP6 (ENSHGLG00000047268) ENSHGLG00000041758 #22 ENSHGLG00000041977 ENSHGLG00000034456 RPRM (ENSHGLG00000020667) GALNT13 (ENSHGLG00000008663) ENSHGLG00000041709 ENSHGLG00000048169 ENSHGLG00000043622 ENSHGLG00000032785 ENSHGLG00000005496 ENSHGLG00000004699 ENSHGLG00000004553 ENSHGLG00000035939 ENSHGLG00000025302 GALNT5 (ENSHGLG00000040944) ERMN (ENSHGLG00000044020) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000032614 ENSHGLG00000012961 ENSHGLG00000040252 ENSHGLG00000034828 ENSHGLG00000012366 ENSHGLG00000045948 ENSHGLG00000047744 ENSHGLG00000042454 ENSHGLG00000034078 ENSHGLG00000009139 LIX1 (ENSHGLG00000009013) LNPEP (ENSHGLG00000014656) ERAP1 (ENSHGLG00000007010) ENSHGLG00000008968 ENSHGLG00000004596 ENSHGLG00000041240 #22 PCSK1 (ENSHGLG00000007524) ENSHGLG00000042299 ENSHGLG00000006449 ENSHGLG00000005783 GLRX (ENSHGLG00000005062) ENSHGLG00000004921 SPATA9 (ENSHGLG00000004797) ENSHGLG00000040806 GPR150 (ENSHGLG00000007069) ENSHGLG00000005654 ARSK (ENSHGLG00000005198) SKIC3 (ENSHGLG00000008877) ENSHGLG00000048654 FAM81B (ENSHGLG00000007192) MCTP1 (ENSHGLG00000005301) Naked mole-rat female MODERN SPECIES 16 IVNS1ABP (ENSHGLG00000003305) SWT1 (ENSHGLG00000006542) ENSHGLG00000003135 ENSHGLG00000004191 ENSHGLG00000021138 ENSHGLG00000013124 ENSHGLG00000040450 ENSHGLG00000036708 ENSHGLG00000007310 ENSHGLG00000019379 ENSHGLG00000041312 ENSHGLG00000014856 ENSHGLG00000018157 ENSHGLG00000044661 ENSHGLG00000021029 ENSHGLG00000043630 #22 ENSHGLG00000018727 COLGALT2 (ENSHGLG00000038139) APOBEC4 (ENSHGLG00000040323) RGL1 (ENSHGLG00000018901) ARPC5 (ENSHGLG00000013926) NCF2 (ENSHGLG00000018696) ENSHGLG00000048289 ENSHGLG00000048693 SMG7 (ENSHGLG00000009353) NMNAT2 (ENSHGLG00000013656) ENSHGLG00000047479 LAMC2 (ENSHGLG00000018611) ENSHGLG00000015294 LAMC1 (ENSHGLG00000017483) ENSHGLG00000040662 Sciuridae ANCESTRAL SPECIES 7 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005015668 ENSSVLG00005015702 ENSSVLG00005015719 ENSSVLG00005015763 ENSSVLG00005015803 ENSSVLG00005015865 ENSSVLG00005015908 ZNF280B (ENSSVLG00005015969) ZNF280A (ENSSVLG00005015985) ENSSVLG00005016018 ENSSVLG00005016047 PRAME (ENSSVLG00005016081) ENSSVLG00005016266 ENSSVLG00005016299 ENSSVLG00005016327 ENSSVLG00005016380 #22 ENSSVLG00005016441 ENSSVLG00005016500 ENSSVLG00005016541 ENSSVLG00005016561 ENSSVLG00005016602 ENSSVLG00005016645 ENSSVLG00005016666 ENSSVLG00005004629 ENSSVLG00005004660 ENSSVLG00005004674 ENSSVLG00005004682 ENSSVLG00005004698 ENSSVLG00005004725 ENSSVLG00005004761 RSPH14 (ENSSVLG00005004828) Eurasian red squirrel MODERN SPECIES 17 PON1 (ENSSVLG00005006959) ##8 PON3 (ENSSVLG00005006880) #7 ENSSVLG00005006855 PON2 (ENSSVLG00005006826) #8 ASB4 (ENSSVLG00005006747) #9 PDK4 (ENSSVLG00005006655) #10 DYNC1I1 (ENSSVLG00005006176) #11 SLC25A13 (ENSSVLG00005005915) #12 SEM1 (ENSSVLG00005005837) #13 DLX6 (ENSSVLG00005005785) #15 DLX5 (ENSSVLG00005005760) #17 SDHAF3 (ENSSVLG00005005726) ENSSVLG00005005692 TAC1 (ENSSVLG00005005619) #20 ASNS (ENSSVLG00005005522) #21 ENSSVLG00005005474 #22 COL28A1 (ENSSVLG00005005316) #23 MIOS (ENSSVLG00005005256) #24 ENSSVLG00005005197 #25 UMAD1 (ENSSVLG00005005159) #26 GLCCI1 (ENSSVLG00005005120) #27 ICA1 (ENSSVLG00005005008) #28 NXPH1 (ENSSVLG00005004963) #29 ENSSVLG00005004936 ENSSVLG00005004917 #31 PHF14 (ENSSVLG00005004805) #32 THSD7A (ENSSVLG00005004648) #33 TMEM106B (ENSSVLG00005004591) #34 VWDE (ENSSVLG00005004522) #35 ENSSVLG00005004482 TMEM168 (ENSSVLG00005004449) Marmotini ANCESTRAL SPECIES 35 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00390000005941 ENSGT00390000010382 Alpin marmot MODERN SPECIES 22 CASD1 (ENSMMMG00000013107) COL1A2 (ENSMMMG00000013132) BET1 (ENSMMMG00000013215) ASB4 (ENSMMMG00000013230) #9 PDK4 (ENSMMMG00000013241) #10 DYNC1I1 (ENSMMMG00000013269) #11 SLC25A13 (ENSMMMG00000013399) #12 SEM1 (ENSMMMG00000013480) #13 ENSMMMG00000013494 DLX6 (ENSMMMG00000013501) #15 DLX5 (ENSMMMG00000013512) #17 ENSMMMG00000013521 SDHAF3 (ENSMMMG00000013528) TAC1 (ENSMMMG00000013539) #20 ASNS (ENSMMMG00000013577) #21 C1GALT1 (ENSMMMG00000013591) #22 COL28A1 (ENSMMMG00000013600) #23 ENSMMMG00000013638 MIOS (ENSMMMG00000013649) #24 RPA3 (ENSMMMG00000013664) #25 UMAD1 (ENSMMMG00000013672) #26 GLCCI1 (ENSMMMG00000013684) #27 ICA1 (ENSMMMG00000013715) #28 NXPH1 (ENSMMMG00000013827) #29 NDUFA4 (ENSMMMG00000013836) #31 PHF14 (ENSMMMG00000013854) #32 THSD7A (ENSMMMG00000013947) #33 TMEM106B (ENSMMMG00000014045) #34 ENSMMMG00000014055 ENSMMMG00000014069 TMEM168 (ENSMMMG00000014072) Marmotini_b ANCESTRAL SPECIES 66 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000009212.i.a.a ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00510000047602.k.c ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F Squirrel MODERN SPECIES 185 ENSSTOG00000029077 PON1 (ENSSTOG00000011900) ##8 PON3 (ENSSTOG00000025896) #7 PON2 (ENSSTOG00000011912) #8 ASB4 (ENSSTOG00000026077) #9 Pdk4 (ENSSTOG00000021060) #10 DYNC1I1 (ENSSTOG00000008078) #11 SLC25A13 (ENSSTOG00000008106) #12 SEM1 (ENSSTOG00000011501) #13 DLX6 (ENSSTOG00000020785) #15 DLX5 (ENSSTOG00000005162) #17 ENSSTOG00000034315 ENSSTOG00000034550 TAC1 (ENSSTOG00000005410) #20 ASNS (ENSSTOG00000005421) #21 C1GALT1 (ENSSTOG00000028307) #22 COL28A1 (ENSSTOG00000023884) #23 MIOS (ENSSTOG00000014620) #24 RPA3 (ENSSTOG00000031875) #25 UMAD1 (ENSSTOG00000034216) #26 GLCCI1 (ENSSTOG00000021063) #27 ICA1 (ENSSTOG00000004278) #28 NXPH1 (ENSSTOG00000024868) #29 Arctic ground squirrel MODERN SPECIES 91 PPP1R9A (ENSUPAG00010015293) PON1 (ENSUPAG00010018258) ##8 PON3 (ENSUPAG00010018287) #7 PON2 (ENSUPAG00010018303) #8 ASB4 (ENSUPAG00010018314) #9 PDK4 (ENSUPAG00010018316) #10 DYNC1I1 (ENSUPAG00010018338) #11 SLC25A13 (ENSUPAG00010018426) #12 SEM1 (ENSUPAG00010018488) #13 DLX6 (ENSUPAG00010018504) #15 DLX5 (ENSUPAG00010018520) #17 ENSUPAG00010018528 SDHAF3 (ENSUPAG00010018532) TAC1 (ENSUPAG00010018539) #20 ASNS (ENSUPAG00010018582) #21 C1GALT1 (ENSUPAG00010018594) #22 COL28A1 (ENSUPAG00010018619) #23 ENSUPAG00010018666 MIOS (ENSUPAG00010018670) #24 RPA3 (ENSUPAG00010018685) #25 UMAD1 (ENSUPAG00010018691) #26 GLCCI1 (ENSUPAG00010018705) #27 ICA1 (ENSUPAG00010018725) #28 Lagomorpha ANCESTRAL SPECIES 50 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.b ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 Rabbit DUPLICATION Rabbit MODERN SPECIES 1 PON1 (ENSOCUG00000005136) ##8 PON3 (ENSOCUG00000033613) #7 PON2 (ENSOCUG00000002014) #8 ASB4 (ENSOCUG00000017113) #9 PDK4 (ENSOCUG00000017120) #10 ENSOCUG00000025405 DYNC1I1 (ENSOCUG00000012213) #11 SLC25A13 (ENSOCUG00000009953) #12 ENSOCUG00000026246 ENSOCUG00000025551 DLX6 (ENSOCUG00000008609) #15 DLX5 (ENSOCUG00000008599) #17 ENSOCUG00000015296 ENSOCUG00000006182 #20 ASNS (ENSOCUG00000022945) #21 ENSOCUG00000026002 #22 COL28A1 (ENSOCUG00000024805) #23 ENSOCUG00000000464 MIOS (ENSOCUG00000000466) #24 RPA3 (ENSOCUG00000000467) #25 ENSOCUG00000034765 UMAD1 (ENSOCUG00000035573) #26 ENSOCUG00000016806 #27 ICA1 (ENSOCUG00000016815) #28 ENSOCUG00000027084 NXPH1 (ENSOCUG00000012983) #29 ENSOCUG00000035586 ENSOCUG00000030563 ENSOCUG00000009140 ENSOCUG00000029372 ##31 PHF14 (ENSOCUG00000004678) #32 Rabbit MODERN SPECIES 503 ENSOCUG00000033291 ENSOCUG00000023975 ENSOCUG00000038160 ENSOCUG00000027867 #22 ENSOCUG00000035498 ENSOCUG00000031077 ENSOCUG00000032294 ENSOCUG00000024648 ENSOCUG00000037242 ENSOCUG00000007188 ENSOCUG00000032412 Pika MODERN SPECIES 42 C1GALT1 (ENSOPRG00000003594) #22 COL28A1 (ENSOPRG00000018337) #23 MIOS (ENSOPRG00000015175) #24 ENSOPRG00000015190 #25 Laurasiatheria ANCESTRAL SPECIES 22 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F Suina ANCESTRAL SPECIES 15 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236.a.b #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Pig DUPLICATION Pig MODERN SPECIES 17 ASB4 (ENSSSCG00000015333) #9 PON2 (ENSSSCG00000015331) #8 PDK4 (ENSSSCG00000015334) #10 DYNC1I1 (ENSSSCG00000015335) #11 SLC25A13 (ENSSSCG00000015336) #12 ENSSSCG00000047863 ENSSSCG00000061895 ENSSSCG00000015337 #13 ENSSSCG00000047552 DLX6 (ENSSSCG00000033314) #15 DLX5 (ENSSSCG00000038838) #17 ENSSSCG00000023850 #18 ENSSSCG00000057777 TAC1 (ENSSSCG00000023592) #20 ASNS (ENSSSCG00000015340) #21 ENSSSCG00000038187 #22 ENSSSCG00000049770 COL28A1 (ENSSSCG00000015342) #23 MIOS (ENSSSCG00000015343) #24 RPA3 (ENSSSCG00000023886) #25 UMAD1 (ENSSSCG00000036169) #26 GLCCI1 (ENSSSCG00000015345) #27 ICA1 (ENSSSCG00000015346) #28 NXPH1 (ENSSSCG00000037207) #29 ENSSSCG00000051543 NDUFA4 (ENSSSCG00000024313) #31 PHF14 (ENSSSCG00000026722) #32 THSD7A (ENSSSCG00000015350) #33 TMEM106B (ENSSSCG00000032740) #34 VWDE (ENSSSCG00000022543) #35 ENSSSCG00000049585 #36 Pig MODERN SPECIES 14 ZBTB14 (ENSSSCG00000033032) AKAIN1 (ENSSSCG00000056207) DLGAP1 (ENSSSCG00000003690) TGIF1 (ENSSSCG00000024174) MYL12B (ENSSSCG00000058470) ENSSSCG00000003691 MYOM1 (ENSSSCG00000003693) LPIN2 (ENSSSCG00000038494) EMILIN2 (ENSSSCG00000003694) SMCHD1 (ENSSSCG00000029030) NDC80 (ENSSSCG00000003697) ENSSSCG00000020888 METTL4 (ENSSSCG00000034816) ENSSSCG00000059038 ADCYAP1 (ENSSSCG00000035186) ENSSSCG00000040699 #22 YES1 (ENSSSCG00000031942) ENOSF1 (ENSSSCG00000027169) TYMS (ENSSSCG00000040678) CLUL1 (ENSSSCG00000039398) CETN1 (ENSSSCG00000028613) COLEC12 (ENSSSCG00000040397) THOC1 (ENSSSCG00000025653) USP14 (ENSSSCG00000022559) ROCK1 (ENSSSCG00000021893) ENSSSCG00000026051 ENSSSCG00000058549 GREB1L (ENSSSCG00000003699) ESCO1 (ENSSSCG00000003700) ENSSSCG00000054355 SNRPD1 (ENSSSCG00000003701) Chacoan peccary MODERN SPECIES 101 PPP1R9A (ENSCWAG00000005243) PON1 (ENSCWAG00000005098) ##8 PON3 (ENSCWAG00000005028) #7 PON2 (ENSCWAG00000004936) #8 ASB4 (ENSCWAG00000004895) #9 PDK4 (ENSCWAG00000004831) #10 DYNC1I1 (ENSCWAG00000004316) #11 SLC25A13 (ENSCWAG00000004215) #12 SEM1 (ENSCWAG00000004157) #13 DLX6 (ENSCWAG00000004117) #15 DLX5 (ENSCWAG00000004090) #17 ENSCWAG00000004069 ENSCWAG00000004034 TAC1 (ENSCWAG00000003905) #20 ASNS (ENSCWAG00000003824) #21 C1GALT1 (ENSCWAG00000003792) #22 COL28A1 (ENSCWAG00000003705) #23 MIOS (ENSCWAG00000003656) #24 RPA3 (ENSCWAG00000003646) #25 UMAD1 (ENSCWAG00000003639) #26 GLCCI1 (ENSCWAG00000003628) #27 ICA1 (ENSCWAG00000003594) #28 NXPH1 (ENSCWAG00000003572) #29 ENSCWAG00000003568 NDUFA4 (ENSCWAG00000003561) #31 PHF14 (ENSCWAG00000003543) #32 Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000154268.e.b ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F Cetacea ANCESTRAL SPECIES 13 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a.w.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT00940000159083 #37 ENSGT00940000154546 Odontoceti ANCESTRAL SPECIES 12 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00390000003721.d.b.h ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a.w.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000153524.b.a.a ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236.a.a #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00390000003721.d.b.h ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a.w.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000153524.b.a.a ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236.a.a #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00390000003721.d.b.h ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a.w.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000153524.b.a.a ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546.xb.a ENSGT00940000157123 Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236.a.b #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00390000003721.d.b.h ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a.w.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546.yb ENSGT00940000157123 ENSGT00940000159770 Beluga whale MODERN SPECIES 72 PON3 (ENSDLEG00000018838) #7 PON2 (ENSDLEG00000018855) #8 ASB4 (ENSDLEG00000018860) #9 PDK4 (ENSDLEG00000018866) #10 DYNC1I1 (ENSDLEG00000018882) #11 SLC25A13 (ENSDLEG00000018925) #12 ENSDLEG00000018974 SEM1 (ENSDLEG00000018983) #13 ENSDLEG00000018995 DLX6 (ENSDLEG00000019005) #15 DLX5 (ENSDLEG00000019015) #17 SDHAF3 (ENSDLEG00000019017) #18 ENSDLEG00000019024 TAC1 (ENSDLEG00000019029) #20 ASNS (ENSDLEG00000019032) #21 C1GALT1 (ENSDLEG00000019036) #22 MIOS (ENSDLEG00000019046) #24 RPA3 (ENSDLEG00000019052) #25 UMAD1 (ENSDLEG00000019054) #26 ENSDLEG00000019059 GLCCI1 (ENSDLEG00000019073) #27 ICA1 (ENSDLEG00000019086) #28 NXPH1 (ENSDLEG00000019138) #29 NDUFA4 (ENSDLEG00000019143) ##31 PHF14 (ENSDLEG00000019163) #32 THSD7A (ENSDLEG00000019254) #33 ENSDLEG00000019551 ENSDLEG00000019556 TMEM106B (ENSDLEG00000019559) #34 SCIN (ENSDLEG00000019567) #37 ENSDLEG00000019581 Narwhal MODERN SPECIES 306 PON1 (ENSMMNG00015007758) ##8 PON3 (ENSMMNG00015007714) #7 PON2 (ENSMMNG00015007666) #8 ASB4 (ENSMMNG00015007631) #9 PDK4 (ENSMMNG00015007590) #10 DYNC1I1 (ENSMMNG00015007501) #11 SLC25A13 (ENSMMNG00015007438) #12 SEM1 (ENSMMNG00015007402) #13 ENSMMNG00015007364 DLX6 (ENSMMNG00015007350) #15 DLX5 (ENSMMNG00015007328) #17 SDHAF3 (ENSMMNG00015007315) ENSMMNG00015007300 TAC1 (ENSMMNG00015007275) #20 ASNS (ENSMMNG00015007216) #21 C1GALT1 (ENSMMNG00015007175) #22 MIOS (ENSMMNG00015007154) #24 ENSMMNG00015007125 ENSMMNG00015007099 UMAD1 (ENSMMNG00015007081) #26 GLCCI1 (ENSMMNG00015007056) #27 ICA1 (ENSMMNG00015006974) #28 NXPH1 (ENSMMNG00015006936) #29 ENSMMNG00015006925 ##31 PHF14 (ENSMMNG00015006883) #32 ENSMMNG00015006863 THSD7A (ENSMMNG00015006836) #33 ENSMMNG00015006801 TMEM106B (ENSMMNG00015006772) #34 SCIN (ENSMMNG00015006636) #37 ENSMMNG00015006607 Vaquita MODERN SPECIES 20 PPP1R9A (ENSPSNG00000005512) PON3 (ENSPSNG00000005618) #7 PON2 (ENSPSNG00000005681) #8 ASB4 (ENSPSNG00000005745) #9 PDK4 (ENSPSNG00000005793) #10 DYNC1I1 (ENSPSNG00000005871) #11 SLC25A13 (ENSPSNG00000005922) #12 SEM1 (ENSPSNG00000006009) #13 ENSPSNG00000006051 DLX6 (ENSPSNG00000006068) #15 DLX5 (ENSPSNG00000006083) #17 ENSPSNG00000006103 #18 ENSPSNG00000006117 TAC1 (ENSPSNG00000006155) #20 ASNS (ENSPSNG00000006229) #21 C1GALT1 (ENSPSNG00000006313) #22 MIOS (ENSPSNG00000006353) #24 RPA3 (ENSPSNG00000006394) #25 UMAD1 (ENSPSNG00000006522) #26 ENSPSNG00000006546 GLCCI1 (ENSPSNG00000006591) #27 ICA1 (ENSPSNG00000006670) #28 NXPH1 (ENSPSNG00000006723) #29 ENSPSNG00000006754 ##31 PHF14 (ENSPSNG00000006873) #32 THSD7A (ENSPSNG00000007114) #33 ENSPSNG00000007362 RBM3 (ENSPSNG00000007383) TMEM106B (ENSPSNG00000007412) #34 SCIN (ENSPSNG00000007549) #37 ENSPSNG00000007786 Dolphin MODERN SPECIES 4672 C1GALT1 (ENSTTRG00000013878) #22 Sperm whale MODERN SPECIES 16 ENSPCTG00005003606 PPP1R9A (ENSPCTG00005003688) PON3 (ENSPCTG00005003894) #7 PON2 (ENSPCTG00005003915) #8 ASB4 (ENSPCTG00005003933) #9 PDK4 (ENSPCTG00005003949) #10 DYNC1I1 (ENSPCTG00005003996) #11 SLC25A13 (ENSPCTG00005004115) #12 SEM1 (ENSPCTG00005004135) #13 ENSPCTG00005004168 DLX6 (ENSPCTG00005004174) #15 DLX5 (ENSPCTG00005004189) #17 SDHAF3 (ENSPCTG00005004214) TAC1 (ENSPCTG00005004242) #20 ASNS (ENSPCTG00005004342) #21 C1GALT1 (ENSPCTG00005004436) #22 MIOS (ENSPCTG00005004472) #24 RPA3 (ENSPCTG00005004499) #25 UMAD1 (ENSPCTG00005004533) #26 ENSPCTG00005000222 GLCCI1 (ENSPCTG00005000236) #27 ICA1 (ENSPCTG00005000295) #28 NXPH1 (ENSPCTG00005000346) #29 NDUFA4 (ENSPCTG00005000370) ##31 PHF14 (ENSPCTG00005000457) #32 THSD7A (ENSPCTG00005000630) #33 ENSPCTG00005000703 TMEM106B (ENSPCTG00005000721) #34 SCIN (ENSPCTG00005000815) #37 ARL4A (ENSPCTG00005000841) ENSPCTG00005000845 Blue whale MODERN SPECIES 20 PON2 (ENSBMSG00010009896) #8 ASB4 (ENSBMSG00010009914) #9 PDK4 (ENSBMSG00010009933) #10 DYNC1I1 (ENSBMSG00010009995) #11 SLC25A13 (ENSBMSG00010010204) #12 ENSBMSG00010010215 ENSBMSG00010010225 SEM1 (ENSBMSG00010010239) #13 ENSBMSG00010010264 DLX6 (ENSBMSG00010010273) #15 DLX5 (ENSBMSG00010010283) #17 SDHAF3 (ENSBMSG00010010295) ENSBMSG00010010303 TAC1 (ENSBMSG00010010326) #20 ASNS (ENSBMSG00010010358) #21 C1GALT1 (ENSBMSG00010010380) #22 MIOS (ENSBMSG00010010390) #24 RPA3 (ENSBMSG00010010396) #25 UMAD1 (ENSBMSG00010010406) #26 ENSBMSG00010010413 GLCCI1 (ENSBMSG00010010429) #27 ICA1 (ENSBMSG00010010462) #28 NXPH1 (ENSBMSG00010010502) #29 ENSBMSG00010010516 ENSBMSG00010010526 ##31 PHF14 (ENSBMSG00010010545) #32 THSD7A (ENSBMSG00010010586) #33 ENSBMSG00010010647 ENSBMSG00010010662 ENSBMSG00010010686 TMEM106B (ENSBMSG00010010694) #34 Pecora ANCESTRAL SPECIES 11 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.u.a.b ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.b.b.b.b ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Yarkand deer MODERN SPECIES 9 PON2 (ENSCHYG00000022369) #8 ENSCHYG00000022429 ASB4 (ENSCHYG00000022458) #9 PDK4 (ENSCHYG00000022505) #10 DYNC1I1 (ENSCHYG00000022612) #11 SLC25A13 (ENSCHYG00000022948) #12 ENSCHYG00000004450 SEM1 (ENSCHYG00000005072) #13 DLX6 (ENSCHYG00000005122) #15 DLX5 (ENSCHYG00000005150) #17 ENSCHYG00000005190 #18 ENSCHYG00000005224 TAC1 (ENSCHYG00000005255) #20 ENSCHYG00000005370 ASNS (ENSCHYG00000005413) #21 C1GALT1 (ENSCHYG00000005547) #22 COL28A1 (ENSCHYG00000005593) #23 ENSCHYG00000005629 MIOS (ENSCHYG00000005648) #24 RPA3 (ENSCHYG00000005704) #25 ENSCHYG00000005763 #26 ENSCHYG00000005812 #27 ENSCHYG00000005872 #28 ENSCHYG00000006079 NXPH1 (ENSCHYG00000006108) #29 ENSCHYG00000006128 ENSCHYG00000006144 ENSCHYG00000006164 ENSCHYG00000006195 ##31 PHF14 (ENSCHYG00000006312) #32 THSD7A (ENSCHYG00000006932) #33 Percora_a ANCESTRAL SPECIES 11 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029.a ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.u.a.b ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.b.b.b.b ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Bovidae ANCESTRAL SPECIES 12 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00960000191016 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029.a ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.v ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Caprinae ANCESTRAL SPECIES 10 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00960000191016 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029.a ENSGT00390000002457 #20 ENSGT00390000001994.q #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.a #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.v ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.b.b.a.b ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 Rambouillet Sheep MODERN SPECIES 20 PPP1R9A (ENSOARG00020020218) PON1 (ENSOARG00020020677) ##8 PON3 (ENSOARG00020020726) #7 PON2 (ENSOARG00020020867) #8 ASB4 (ENSOARG00020021059) #9 PDK4 (ENSOARG00020021170) #10 DYNC1I1 (ENSOARG00020021331) #11 SLC25A13 (ENSOARG00020021619) #12 SEM1 (ENSOARG00020021699) #13 ENSOARG00020021764 DLX6 (ENSOARG00020021810) #15 DLX5 (ENSOARG00020021833) #17 SDHAF3 (ENSOARG00020000120) TAC1 (ENSOARG00020000198) #20 ASNS (ENSOARG00020000318) #21 C1GALT1 (ENSOARG00020000380) #22 COL28A1 (ENSOARG00020000523) #23 MIOS (ENSOARG00020000878) #24 ENSOARG00020000903 #25 UMAD1 (ENSOARG00020000913) #26 GLCCI1 (ENSOARG00020000930) #27 ICA1 (ENSOARG00020001005) #28 ENSOARG00020001186 NXPH1 (ENSOARG00020001196) #29 ENSOARG00020001210 NDUFA4 (ENSOARG00020001248) #31 PHF14 (ENSOARG00020001319) #32 THSD7A (ENSOARG00020001568) #33 TMEM106B (ENSOARG00020001680) #34 ENSOARG00020001715 ENSOARG00020001736 #36 Goat MODERN SPECIES 23 PON1 (ENSCHIG00000012757) ##8 PON3 (ENSCHIG00000011355) #7 PON2 (ENSCHIG00000023025) #8 ASB4 (ENSCHIG00000015322) #9 PDK4 (ENSCHIG00000013432) #10 ENSCHIG00000024760 #11 DYNC1I1 (ENSCHIG00000013760) #11 SLC25A13 (ENSCHIG00000022398) #12 ENSCHIG00000010410 ENSCHIG00000020492 DLX6 (ENSCHIG00000022329) #15 DLX5 (ENSCHIG00000009075) #17 ENSCHIG00000008860 #18 TAC1 (ENSCHIG00000022845) #20 ENSCHIG00000013950 #21 C1GALT1 (ENSCHIG00000025282) #22 COL28A1 (ENSCHIG00000015742) #23 MIOS (ENSCHIG00000011181) #24 ENSCHIG00000023481 #25 UMAD1 (ENSCHIG00000017252) #26 GLCCI1 (ENSCHIG00000022941) #27 ICA1 (ENSCHIG00000025576) #28 ENSCHIG00000014633 NXPH1 (ENSCHIG00000010196) #29 ENSCHIG00000008770 ENSCHIG00000013651 ENSCHIG00000014929 ##31 PHF14 (ENSCHIG00000027088) #32 THSD7A (ENSCHIG00000009207) #33 ENSCHIG00000022399 TMEM106B (ENSCHIG00000020985) #34 Bovinae ANCESTRAL SPECIES 8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000018085.a.b.a ENSGT00940000162732 #13 ENSGT00960000191016 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029.a.a ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.v ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.b.b.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Bos ANCESTRAL SPECIES 8 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000018085.a.b.a ENSGT00960000191016 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029.a.a ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.v ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182883.a.b.a #29 ENSGT00390000015564.s.b ENSGT00940000154268.e.b.b.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT01100000263477.F Bos_a ANCESTRAL SPECIES 62 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000018085.a.b.a ENSGT00960000191016 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029.a.a ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182883.a.b.a #29 Wild yak MODERN SPECIES 2680 ASNS (ENSBMUG00000022622) #21 C1GALT1 (ENSBMUG00000022651) #22 Domestic yak MODERN SPECIES 23 ENSBGRG00000009056 ASB4 (ENSBGRG00000008948) #9 PDK4 (ENSBGRG00000008799) #10 DYNC1I1 (ENSBGRG00000008636) #11 SLC25A13 (ENSBGRG00000008346) #12 ENSBGRG00000008310 ENSBGRG00000008295 ENSBGRG00000008161 ENSBGRG00000008138 DLX6 (ENSBGRG00000008067) #15 DLX5 (ENSBGRG00000008025) #17 ENSBGRG00000007996 ENSBGRG00000007971 TAC1 (ENSBGRG00000007816) #20 ASNS (ENSBGRG00000007541) #21 C1GALT1 (ENSBGRG00000007477) #22 COL28A1 (ENSBGRG00000007346) #23 RPA3 (ENSBGRG00000007219) #25 MIOS (ENSBGRG00000007029) #24 GLCCI1 (ENSBGRG00000006968) #27 ICA1 (ENSBGRG00000006607) #28 ENSBGRG00000004021 NXPH1 (ENSBGRG00000003991) #29 ENSBGRG00000003982 ENSBGRG00000003955 ENSBGRG00000003919 ENSBGRG00000003880 ##31 PHF14 (ENSBGRG00000003530) #32 THSD7A (ENSBGRG00000003304) #33 ENSBGRG00000003275 TMEM106B (ENSBGRG00000003262) #34 Bos_b ANCESTRAL SPECIES 7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.a ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00390000018085.a.b.a ENSGT00940000154466.t ENSGT00960000191016 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT01090000260575 ENSGT00940000164236.a.b #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000183014.f.a.h.v ENSGT00940000153147.m.a.a.a.b.a.a ENSGT00950000182883.a.b.a #29 ENSGT00390000015564.s.b ENSGT00940000154268.e.b.b.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT01100000263477.F Hybrid Bos Indicus MODERN SPECIES 23 PDK4 (ENSBIXG00005015845) #10 DYNC1I1 (ENSBIXG00005015981) #11 ENSBIXG00005016016 SLC25A13 (ENSBIXG00005016053) #12 ENSBIXG00005016067 ENSBIXG00005007026 #13 ENSBIXG00005016135 ENSBIXG00005016193 DLX6 (ENSBIXG00005016210) #15 DLX5 (ENSBIXG00005016234) #17 ENSBIXG00005016248 ENSBIXG00005016262 #18 ENSBIXG00005016310 #20 ASNS (ENSBIXG00005016374) #21 ENSBIXG00005016397 C1GALT1 (ENSBIXG00005016418) #22 COL28A1 (ENSBIXG00005016589) #23 MIOS (ENSBIXG00005016685) #24 RPA3 (ENSBIXG00005016720) #25 UMAD1 (ENSBIXG00005005510) #26 GLCCI1 (ENSBIXG00005016804) #27 ICA1 (ENSBIXG00005016867) #28 ENSBIXG00005016894 NXPH1 (ENSBIXG00005016983) #29 ENSBIXG00005017011 ENSBIXG00005017031 ENSBIXG00005017089 ##31 PHF14 (ENSBIXG00005006867) #32 THSD7A (ENSBIXG00005017371) #33 TMEM106B (ENSBIXG00005017459) #34 ENSBIXG00005017487 Cow MODERN SPECIES 23 ASB4 (ENSBTAG00000018185) #9 ENSBTAG00000047555 PDK4 (ENSBTAG00000014069) #10 DYNC1I1 (ENSBTAG00000027134) #11 SLC25A13 (ENSBTAG00000003773) #12 ENSBTAG00000035660 SEM1 (ENSBTAG00000052508) #13 ENSBTAG00000020685 ENSBTAG00000053173 DLX6 (ENSBTAG00000021458) #15 DLX5 (ENSBTAG00000018645) #17 ENSBTAG00000054132 SDHAF3 (ENSBTAG00000015925) #18 TAC1 (ENSBTAG00000015356) #20 ASNS (ENSBTAG00000003222) #21 C1GALT1 (ENSBTAG00000004995) #22 COL28A1 (ENSBTAG00000024420) #23 MIOS (ENSBTAG00000013781) #24 RPA3 (ENSBTAG00000013168) #25 UMAD1 (ENSBTAG00000047004) #26 GLCCI1 (ENSBTAG00000008533) #27 ICA1 (ENSBTAG00000000799) #28 ENSBTAG00000055236 ENSBTAG00000045937 NXPH1 (ENSBTAG00000006924) #29 ENSBTAG00000049682 ENSBTAG00000038527 NDUFA4 (ENSBTAG00000011145) ##31 PHF14 (ENSBTAG00000011819) #32 THSD7A (ENSBTAG00000007680) #33 TMEM106B (ENSBTAG00000019750) #34 American bison MODERN SPECIES 3058 PON2 (ENSBBBG00000019245) #8 ASB4 (ENSBBBG00000004982) #9 ENSBBBG00000004984 PDK4 (ENSBBBG00000019269) #10 DYNC1I1 (ENSBBBG00000019384) #11 SLC25A13 (ENSBBBG00000008948) #12 ENSBBBG00000008660 SEM1 (ENSBBBG00000005233) #13 ENSBBBG00000019472 DLX6 (ENSBBBG00000005246) #15 DLX5 (ENSBBBG00000009075) #17 SDHAF3 (ENSBBBG00000019488) ENSBBBG00000019491 TAC1 (ENSBBBG00000019522) #20 ASNS (ENSBBBG00000005315) #21 C1GALT1 (ENSBBBG00000019593) #22 COL28A1 (ENSBBBG00000019641) #23 MIOS (ENSBBBG00000019669) #24 RPA3 (ENSBBBG00000019682) #25 UMAD1 (ENSBBBG00000019686) #26 GLCCI1 (ENSBBBG00000019699) #27 ICA1 (ENSBBBG00000005347) #28 NXPH1 (ENSBBBG00000019763) #29 Siberian musk deer MODERN SPECIES 1158 PON1 (ENSMMSG00000016965) ##8 PON3 (ENSMMSG00000016879) #7 PON2 (ENSMMSG00000016826) #8 ASB4 (ENSMMSG00000016724) #9 PDK4 (ENSMMSG00000016674) #10 DYNC1I1 (ENSMMSG00000015838) #11 SLC25A13 (ENSMMSG00000015776) #12 SEM1 (ENSMMSG00000015729) #13 ENSMMSG00000015706 #15 DLX5 (ENSMMSG00000015689) #17 ENSMMSG00000015676 ENSMMSG00000015668 ENSMMSG00000015643 TAC1 (ENSMMSG00000015513) #20 ASNS (ENSMMSG00000015432) #21 C1GALT1 (ENSMMSG00000015414) #22 COL28A1 (ENSMMSG00000015374) #23 MIOS (ENSMMSG00000015314) #24 RPA3 (ENSMMSG00000015284) #25 UMAD1 (ENSMMSG00000015274) #26 GLCCI1 (ENSMMSG00000015242) #27 ICA1 (ENSMMSG00000015191) #28 ENSMMSG00000015176 NXPH1 (ENSMMSG00000015158) #29 ENSMMSG00000015146 ENSMMSG00000015136 Camelidae ANCESTRAL SPECIES 2 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 Arabian camel MODERN SPECIES 33 PPP1R9A (ENSCDRG00005002429) PON1 (ENSCDRG00005002595) ##8 PON3 (ENSCDRG00005002624) #7 PON2 (ENSCDRG00005002647) #8 ASB4 (ENSCDRG00005002691) #9 PDK4 (ENSCDRG00005002723) #10 DYNC1I1 (ENSCDRG00005002752) #11 SLC25A13 (ENSCDRG00005002791) #12 ENSCDRG00005002860 DLX6 (ENSCDRG00005002890) #15 ENSCDRG00005002902 DLX5 (ENSCDRG00005002916) #17 SDHAF3 (ENSCDRG00005002930) TAC1 (ENSCDRG00005002949) #20 ASNS (ENSCDRG00005002993) #21 C1GALT1 (ENSCDRG00005003044) #22 COL28A1 (ENSCDRG00005003074) #23 MIOS (ENSCDRG00005003114) #24 RPA3 (ENSCDRG00005003135) #25 UMAD1 (ENSCDRG00005003150) #26 ENSCDRG00005003161 #27 ICA1 (ENSCDRG00005003204) #28 NXPH1 (ENSCDRG00005003418) #29 ENSCDRG00005003437 #31 PHF14 (ENSCDRG00005003597) #32 THSD7A (ENSCDRG00005004035) #33 TMEM106B (ENSCDRG00005004538) #34 VWDE (ENSCDRG00005004582) #35 ENSCDRG00005004720 SCIN (ENSCDRG00005004736) #37 ARL4A (ENSCDRG00005004807) Alpaca MODERN SPECIES 1667 C1GALT1 (ENSVPAG00000005044) #22 COL28A1 (ENSVPAG00000005045) #23 MIOS (ENSVPAG00000005046) #24 RPA3 (ENSVPAG00000005047) #25 UMAD1 (ENSVPAG00000005048) #26 GLCCI1 (ENSVPAG00000005049) #27 ICA1 (ENSVPAG00000005050) #28 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Carnivora ANCESTRAL SPECIES 15 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F Caniformia ANCESTRAL SPECIES 11 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Ursidae ANCESTRAL SPECIES 12 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00850000133584 #36 Ursus ANCESTRAL SPECIES 54 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 American black bear MODERN SPECIES 5724 C1GALT1 (ENSUAMG00000008653) #22 Polar bear MODERN SPECIES 132 PON1 (ENSUMAG00000021412) ##8 PON3 (ENSUMAG00000021419) #7 PON2 (ENSUMAG00000021432) #8 ASB4 (ENSUMAG00000021464) #9 PDK4 (ENSUMAG00000021470) #10 DYNC1I1 (ENSUMAG00000021477) #11 SLC25A13 (ENSUMAG00000021484) #12 SEM1 (ENSUMAG00000021491) #13 ENSUMAG00000021506 DLX6 (ENSUMAG00000021509) #15 ENSUMAG00000021511 #16 DLX5 (ENSUMAG00000021517) #17 SDHAF3 (ENSUMAG00000021523) TAC1 (ENSUMAG00000021530) #20 ASNS (ENSUMAG00000021541) #21 C1GALT1 (ENSUMAG00000021545) #22 COL28A1 (ENSUMAG00000021547) #23 MIOS (ENSUMAG00000021553) #24 ENSUMAG00000021556 #25 Giant Panda MODERN SPECIES PPP1R9A (ENSAMEG00000025027) PON1 (ENSAMEG00000010218) ##8 PON3 (ENSAMEG00000010256) #7 PON2 (ENSAMEG00000010274) #8 ASB4 (ENSAMEG00000010301) #9 PDK4 (ENSAMEG00000010313) #10 DYNC1I1 (ENSAMEG00000010340) #11 SLC25A13 (ENSAMEG00000010393) #12 SEM1 (ENSAMEG00000010434) #13 DLX6 (ENSAMEG00000030077) #15 ENSAMEG00000023534 #16 DLX5 (ENSAMEG00000025315) #17 SDHAF3 (ENSAMEG00000005591) TAC1 (ENSAMEG00000016330) #20 ENSAMEG00000016335 #21 ENSAMEG00000016360 #22 ENSAMEG00000016366 #23 MIOS (ENSAMEG00000016383) #24 RPA3 (ENSAMEG00000016401) #25 ICA1 (ENSAMEG00000016413) #28 NXPH1 (ENSAMEG00000014288) #29 NDUFA4 (ENSAMEG00000002493) #31 PHF14 (ENSAMEG00000002497) #32 THSD7A (ENSAMEG00000010568) #33 TMEM106B (ENSAMEG00000009789) #34 VWDE (ENSAMEG00000009806) #35 ENSAMEG00000019235 ENSAMEG00000027686 #36 SCIN (ENSAMEG00000009826) #37 ARL4A (ENSAMEG00000019250) ETV1 (ENSAMEG00000016305) Mustelinae ANCESTRAL SPECIES 46 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 Ferret MODERN SPECIES 292 SGCE (ENSMPUG00000001594) ENSMPUG00000019410 PPP1R9A (ENSMPUG00000001584) PON1 (ENSMPUG00000001579) ##8 PON3 (ENSMPUG00000001572) #7 PON2 (ENSMPUG00000001566) #8 ASB4 (ENSMPUG00000001561) #9 PDK4 (ENSMPUG00000001556) #10 DYNC1I1 (ENSMPUG00000001547) #11 SLC25A13 (ENSMPUG00000001535) #12 DLX6 (ENSMPUG00000001519) #15 DLX5 (ENSMPUG00000001514) #17 SDHAF3 (ENSMPUG00000001512) TAC1 (ENSMPUG00000001508) #20 ASNS (ENSMPUG00000001501) #21 C1GALT1 (ENSMPUG00000001496) #22 COL28A1 (ENSMPUG00000001484) #23 MIOS (ENSMPUG00000001438) #24 ENSMPUG00000001435 #25 GLCCI1 (ENSMPUG00000001415) #27 ICA1 (ENSMPUG00000001408) #28 NXPH1 (ENSMPUG00000001403) #29 American mink MODERN SPECIES 89 PON1 (ENSNVIG00000019295) ##8 PON3 (ENSNVIG00000019307) #7 PON2 (ENSNVIG00000019351) #8 ASB4 (ENSNVIG00000019375) #9 PDK4 (ENSNVIG00000019382) #10 DYNC1I1 (ENSNVIG00000019409) #11 SLC25A13 (ENSNVIG00000019576) #12 SEM1 (ENSNVIG00000019631) #13 ENSNVIG00000019656 DLX6 (ENSNVIG00000019667) #15 DLX5 (ENSNVIG00000019679) #17 ACN9 (ENSNVIG00000019698) ENSNVIG00000019703 TAC1 (ENSNVIG00000019710) #20 ASNS (ENSNVIG00000019745) #21 C1GALT1 (ENSNVIG00000019827) #22 ENSNVIG00000019840 COL28A1 (ENSNVIG00000019846) #23 MIO (ENSNVIG00000019915) #24 RFA3 (ENSNVIG00000019956) #25 ENSNVIG00000019979 #26 ENSNVIG00000020014 #27 ICA1 (ENSNVIG00000020027) #28 NXPH1 (ENSNVIG00000020111) #29 Canidae ANCESTRAL SPECIES 22 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 ENSGT00940000154546 Canis_lupus ANCESTRAL SPECIES 24 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000163409 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029.c #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00950000182987.c.a.a.i.a.b ENSGT00940000158360.e #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00390000016988.a.a.a.b.a.b.a.a Dog MODERN SPECIES 5 PEG10 (ENSCAFG00845019307) PPP1R9A (ENSCAFG00845019528) PON1 (ENSCAFG00845020626) ##8 PON1 (ENSCAFG00845020697) #7 PON2 (ENSCAFG00845020811) #8 ASB4 (ENSCAFG00845020937) #9 PDK4 (ENSCAFG00845021015) #10 DYNC1I1 (ENSCAFG00845021237) #11 SLC25A13 (ENSCAFG00845021467) #12 ENSCAFG00845021558 ENSCAFG00845021649 DLX6 (ENSCAFG00845021877) #15 DLX5 (ENSCAFG00845022026) #17 ENSCAFG00845022098 #20 ASNS (ENSCAFG00845022196) #21 ENSCAFG00845022359 #22 ENSCAFG00845022480 #23 MIOS (ENSCAFG00845022762) #24 ENSCAFG00845023019 #25 ENSCAFG00845023104 #26 GLCCI1 (ENSCAFG00845023274) #27 ICA1 (ENSCAFG00845023498) #28 NXPH1 (ENSCAFG00845023794) #29 PHF14 (ENSCAFG00845024252) #32 THSD7A (ENSCAFG00845025032) #33 ENSCAFG00845025217 TMEM106B (ENSCAFG00845025296) #34 VWDE (ENSCAFG00845025445) #35 CAFA-T2R2 (ENSCAFG00845026242) ENSCAFG00845026272 #36 ENSCAFG00845026320 Dingo MODERN SPECIES 203 PON1 (ENSCAFG00020011240) ##8 PON3 (ENSCAFG00020011223) #7 PON2 (ENSCAFG00020011216) #8 PDK4 (ENSCAFG00020011212) #10 ENSCAFG00020011207 #11 ENSCAFG00020011190 #11 ENSCAFG00020011187 ENSCAFG00020010643 #12 DLX6 (ENSCAFG00020010631) #15 ENSCAFG00020010627 #16 DLX5 (ENSCAFG00020010625) #17 SDHAF3 (ENSCAFG00020010615) ENSCAFG00020010609 TAC1 (ENSCAFG00020010587) #20 ASNS (ENSCAFG00020010580) #21 C1GALT1 (ENSCAFG00020010576) #22 ENSCAFG00020010574 ENSCAFG00020010572 MIOS (ENSCAFG00020010551) #24 ENSCAFG00020010550 #25 UMAD1 (ENSCAFG00020010547) #26 GLCCI1 (ENSCAFG00020010535) #27 ICA1 (ENSCAFG00020010319) #28 NXPH1 (ENSCAFG00020010302) #29 PHF14 (ENSCAFG00020010292) #32 THSD7A (ENSCAFG00020010234) #33 ENSCAFG00020010212 ENSCAFG00020010208 #34 ENSCAFG00020010202 ENSCAFG00020010201 ENSCAFG00020010199 Red fox MODERN SPECIES 48 PON1 (ENSVVUG00000015624) ##8 PON3 (ENSVVUG00000015625) #7 PON2 (ENSVVUG00000015637) #8 ASB4 (ENSVVUG00000015642) #9 PDK4 (ENSVVUG00000015648) #10 DYNC1I1 (ENSVVUG00000015673) #11 SLC25A13 (ENSVVUG00000015715) #12 ENSVVUG00000015747 ENSVVUG00000015757 DLX6 (ENSVVUG00000015777) #15 DLX5 (ENSVVUG00000015813) #17 ENSVVUG00000015821 TAC1 (ENSVVUG00000015838) #20 ENSVVUG00000015848 ASNS (ENSVVUG00000015859) #21 C1GALT1 (ENSVVUG00000015871) #22 COL28A1 (ENSVVUG00000015891) #23 MIOS (ENSVVUG00000015960) #24 ENSVVUG00000015968 #25 ENSVVUG00000015971 #26 ENSVVUG00000015981 #27 ICA1 (ENSVVUG00000015987) #28 NXPH1 (ENSVVUG00000016058) #29 ENSVVUG00000016064 ENSVVUG00000016084 ##31 ENSVVUG00000016088 PHF14 (ENSVVUG00000016098) #32 THSD7A (ENSVVUG00000016151) #33 ENSVVUG00000016199 TMEM106B (ENSVVUG00000016203) #34 VWDE (ENSVVUG00000016207) #35 Felidae ANCESTRAL SPECIES 13 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Panthera ANCESTRAL SPECIES 1 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Panthera_a ANCESTRAL SPECIES ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00910000147039 #16 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.e.a ##31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 lion MODERN SPECIES 2 PON1 (ENSPLOG00000016943) ##8 PON3 (ENSPLOG00000017038) #7 PON2 (ENSPLOG00000017185) #8 ASB4 (ENSPLOG00000017377) #9 PDK4 (ENSPLOG00000017484) #10 DYNC1I1 (ENSPLOG00000017626) #11 SLC25A13 (ENSPLOG00000018233) #12 SEM1 (ENSPLOG00000018292) #13 ENSPLOG00000018395 DLX6 (ENSPLOG00000018415) #15 ENSPLOG00000018456 #16 DLX5 (ENSPLOG00000018485) #17 SDHAF3 (ENSPLOG00000018540) TAC1 (ENSPLOG00000018609) #20 ASNS (ENSPLOG00000018770) #21 C1GALT1 (ENSPLOG00000018883) #22 COL28A1 (ENSPLOG00000018923) #23 MIOS (ENSPLOG00000019131) #24 RPA3 (ENSPLOG00000019171) #25 UMAD1 (ENSPLOG00000019213) #26 GLCCI1 (ENSPLOG00000019253) #27 ICA1 (ENSPLOG00000019284) #28 NXPH1 (ENSPLOG00000019464) #29 ENSPLOG00000019496 ##31 ENSPLOG00000019529 PHF14 (ENSPLOG00000019605) #32 THSD7A (ENSPLOG00000019788) #33 TMEM106B (ENSPLOG00000020063) #34 VWDE (ENSPLOG00000020102) #35 ENSPLOG00000020288 ENSPLOG00000020306 #36 leopard MODERN SPECIES 9 PON3 (ENSPPRG00000009646) #7 PON2 (ENSPPRG00000008699) #8 ASB4 (ENSPPRG00000007721) #9 PDK4 (ENSPPRG00000006772) #10 DYNC1I1 (ENSPPRG00000006550) #11 ENSPPRG00000002150 SLC25A13 (ENSPPRG00000001937) #12 SEM1 (ENSPPRG00000000502) #13 ENSPPRG00000015965 DLX6 (ENSPPRG00000022762) #15 DLX5 (ENSPPRG00000023013) #17 SDHAF3 (ENSPPRG00000023385) ENSPPRG00000020877 TAC1 (ENSPPRG00000019181) #20 ASNS (ENSPPRG00000018642) #21 C1GALT1 (ENSPPRG00000014040) #22 COL28A1 (ENSPPRG00000013113) #23 MIOS (ENSPPRG00000012147) #24 RPA3 (ENSPPRG00000011518) #25 UMAD1 (ENSPPRG00000011362) #26 GLCCI1 (ENSPPRG00000010852) #27 ICA1 (ENSPPRG00000010134) #28 NXPH1 (ENSPPRG00000005930) #29 ENSPPRG00000005600 ##31 PHF14 (ENSPPRG00000005010) #32 THSD7A (ENSPPRG00000003281) #33 ENSPPRG00000000847 TMEM106B (ENSPPRG00000000247) #34 VWDE (ENSPPRG00000022687) #35 ENSPPRG00000015033 ENSPPRG00000023589 #36 Tiger MODERN SPECIES 86 PON1 (ENSPTIG00000013016) ##8 PON3 (ENSPTIG00000010734) #7 PON2 (ENSPTIG00000007995) #8 ASB4 (ENSPTIG00000007277) #9 ENSPTIG00000005690 #10 ENSPTIG00000003162 #11 ENSPTIG00000021023 #11 SLC25A13 (ENSPTIG00000017442) #12 SEM1 (ENSPTIG00000016399) #13 ENSPTIG00000005830 DLX6 (ENSPTIG00000015917) #15 DLX5 (ENSPTIG00000015406) #17 SDHAF3 (ENSPTIG00000014702) TAC1 (ENSPTIG00000012039) #20 ASNS (ENSPTIG00000010610) #21 C1GALT1 (ENSPTIG00000009676) #22 COL28A1 (ENSPTIG00000003687) #23 MIOS (ENSPTIG00000020989) #24 RPA3 (ENSPTIG00000020731) #25 UMAD1 (ENSPTIG00000020441) #26 ENSPTIG00000020014 #27 ICA1 (ENSPTIG00000016701) #28 NXPH1 (ENSPTIG00000016592) #29 ENSPTIG00000016258 ##31 PHF14 (ENSPTIG00000013018) #32 THSD7A (ENSPTIG00000008613) #33 Cat MODERN SPECIES 1 PON3 (ENSFCAG00000008297) #7 PON2 (ENSFCAG00000031767) #8 ASB4 (ENSFCAG00000009993) #9 PDK4 (ENSFCAG00000028642) #10 DYNC1I1 (ENSFCAG00000011808) #11 SLC25A13 (ENSFCAG00000011810) #12 ENSFCAG00000051628 SEM1 (ENSFCAG00000037589) #13 ENSFCAG00000037742 DLX6 (ENSFCAG00000026168) #15 ENSFCAG00000033780 #16 DLX5 (ENSFCAG00000045842) #17 SDHAF3 (ENSFCAG00000023112) TAC1 (ENSFCAG00000027120) #20 ASNS (ENSFCAG00000022830) #21 C1GALT1 (ENSFCAG00000029442) #22 COL28A1 (ENSFCAG00000018957) #23 MIOS (ENSFCAG00000012070) #24 RPA3 (ENSFCAG00000037352) #25 UMAD1 (ENSFCAG00000039038) #26 GLCCI1 (ENSFCAG00000044916) #27 ICA1 (ENSFCAG00000013009) #28 NXPH1 (ENSFCAG00000006670) #29 ENSFCAG00000039840 ##31 PHF14 (ENSFCAG00000032020) #32 THSD7A (ENSFCAG00000012989) #33 TMEM106B (ENSFCAG00000045115) #34 VWDE (ENSFCAG00000024923) #35 ENSFCAG00000034795 ENSFCAG00000044238 #36 SCIN (ENSFCAG00000005088) #37 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Equus ANCESTRAL SPECIES 13 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00850000133584 #36 ENSGT00940000159083 #37 Donkey MODERN SPECIES PON2 (ENSEASG00005020892) #8 ASB4 (ENSEASG00005020898) #9 PDK4 (ENSEASG00005020903) #10 DYNC1I1 (ENSEASG00005020909) #11 SLC25A13 (ENSEASG00005020923) #12 SEM1 (ENSEASG00005037776) #13 ENSEASG00005020938 DLX6 (ENSEASG00005020943) #15 DLX5 (ENSEASG00005020950) #17 ENSEASG00005020955 ENSEASG00005024327 #18 ENSEASG00005020961 ENSEASG00005032200 #20 ENSEASG00005020972 #21 ENSEASG00005020977 ENSEASG00005027814 #22 COL28A1 (ENSEASG00005021002) #23 MIOS (ENSEASG00005021021) #24 RPA3 (ENSEASG00005030958) #25 UMAD1 (ENSEASG00005032980) #26 GLCCI1 (ENSEASG00005021039) #27 ICA1 (ENSEASG00005021047) #28 NXPH1 (ENSEASG00005027831) #29 ENSEASG00005031867 #31 ENSEASG00005026321 #32 ENSEASG00005021067 #32 THSD7A (ENSEASG00005021079) #33 TMEM106B (ENSEASG00005021093) #34 VWDE (ENSEASG00005021097) #35 ENSEASG00005021104 ENSEASG00005031273 #36 Horse MODERN SPECIES 25 PON1 (ENSECAG00000000344) ##8 PON3 (ENSECAG00000009974) #7 PON2 (ENSECAG00000010414) #8 ASB4 (ENSECAG00000022256) #9 PDK4 (ENSECAG00000008335) #10 DYNC1I1 (ENSECAG00000014203) #11 SLC25A13 (ENSECAG00000013738) #12 SEM1 (ENSECAG00000043120) #13 ENSECAG00000057784 DLX6 (ENSECAG00000019084) #15 DLX5 (ENSECAG00000019565) #17 SDHAF3 (ENSECAG00000000424) TAC1 (ENSECAG00000002538) #20 ASNS (ENSECAG00000012134) #21 ENSECAG00000029294 C1GALT1 (ENSECAG00000013002) #22 COL28A1 (ENSECAG00000013598) #23 MIOS (ENSECAG00000021834) #24 ENSECAG00000046902 RPA3 (ENSECAG00000054203) #25 UMAD1 (ENSECAG00000040063) #26 ENSECAG00000056496 ENSECAG00000052905 GLCCI1 (ENSECAG00000009379) #27 ICA1 (ENSECAG00000011651) #28 NXPH1 (ENSECAG00000037686) #29 ENSECAG00000026987 ##31 PHF14 (ENSECAG00000016040) #32 THSD7A (ENSECAG00000000292) #33 TMEM106B (ENSECAG00000014967) #34 ENSECAG00000059695 Chiroptera ANCESTRAL SPECIES 24 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 Microchiroptera ANCESTRAL SPECIES 24 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00910000146930 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00940000159083 #37 ENSGT00940000154546 Microbat MODERN SPECIES 952 SGCE (ENSMLUG00000016724) PPP1R9A (ENSMLUG00000014166) PON1 (ENSMLUG00000014176) ##8 PON3 (ENSMLUG00000006984) #7 PON2 (ENSMLUG00000006998) #8 ASB4 (ENSMLUG00000007018) #9 PDK4 (ENSMLUG00000007027) #10 DYNC1I1 (ENSMLUG00000013664) #11 SLC25A13 (ENSMLUG00000013686) #12 SEM1 (ENSMLUG00000014208) #13 DLX6 (ENSMLUG00000016909) #15 DLX5 (ENSMLUG00000028784) #17 SDHAF3 (ENSMLUG00000016914) TAC1 (ENSMLUG00000002327) #20 ASNS (ENSMLUG00000006832) #21 C1GALT1 (ENSMLUG00000014789) #22 COL28A1 (ENSMLUG00000030093) #23 MIOS (ENSMLUG00000007258) #24 RPA3 (ENSMLUG00000007421) #25 GLCCI1 (ENSMLUG00000016797) #27 ICA1 (ENSMLUG00000016801) #28 NXPH1 (ENSMLUG00000003339) #29 NDUFA4 (ENSMLUG00000006470) #31 PHF14 (ENSMLUG00000010669) #32 THSD7A (ENSMLUG00000007494) #33 TMEM106B (ENSMLUG00000003287) #34 ENSMLUG00000024334 SCIN (ENSMLUG00000009565) #37 ARL4A (ENSMLUG00000006004) ENSMLUG00000026120 ETV1 (ENSMLUG00000013778) Greater horseshoe bat MODERN SPECIES 12 ASB4 (ENSRFEG00010011309) #9 PDK4 (ENSRFEG00010011206) #10 ENSRFEG00010011186 DYNC1I1 (ENSRFEG00010010978) #11 SLC25A13 (ENSRFEG00010010892) #12 ENSRFEG00010010866 ENSRFEG00010010788 #13 ENSRFEG00010010760 DLX6 (ENSRFEG00010010699) #15 DLX5 (ENSRFEG00010010599) #17 SDHAF3 (ENSRFEG00010010477) ENSRFEG00010019020 TAC1 (ENSRFEG00010018939) #20 ASNS (ENSRFEG00010018859) #21 ENSRFEG00010018832 C1GALT1 (ENSRFEG00010018762) #22 COL28A1 (ENSRFEG00010018733) #23 MIOS (ENSRFEG00010018659) #24 RPA3 (ENSRFEG00010018600) #25 UMAD1 (ENSRFEG00010018549) #26 GLCCI1 (ENSRFEG00010018508) #27 ICA1 (ENSRFEG00010018424) #28 NXPH1 (ENSRFEG00010018380) #29 ENSRFEG00010018342 #31 PHF14 (ENSRFEG00010018214) #32 THSD7A (ENSRFEG00010018151) #33 TMEM106B (ENSRFEG00010018123) #34 VWDE (ENSRFEG00010017733) #35 ENSRFEG00010017706 SCIN (ENSRFEG00010017496) #37 ARL4A (ENSRFEG00010017467) Megabat MODERN SPECIES 6932 C1GALT1 (ENSPVAG00000009426) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155000 #22 Hedgehog MODERN SPECIES 980 C1GALT1 (ENSEEUG00000013293) #22 Common shrew MODERN SPECIES 11472 C1GALT1 (ENSSARG00000005012) #22 Atlantogenata ANCESTRAL SPECIES 7 ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.f #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT00940000159083 #37 ENSGT00940000154546 Xenarthra ANCESTRAL SPECIES 1358 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 Sloth MODERN SPECIES 751 C1GALT1 (ENSCHOG00000000225) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3973 TAC1 (ENSDNOG00000014180) #20 ASNS (ENSDNOG00000014660) #21 C1GALT1 (ENSDNOG00000017353) #22 ENSDNOG00000039476 Armadillo MODERN SPECIES 3755 ENSDNOG00000041989 #22 Afrotheria ANCESTRAL SPECIES 5 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT00440000033807 ENSGT00940000154018.b ENSGT00390000006412 ENSGT00390000014900.b.b.a ENSGT00940000164009 Afrotheria_a ANCESTRAL SPECIES 5 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT00440000033807 ENSGT00940000154018.b ENSGT00390000006412 ENSGT00390000014900.b.b.a ENSGT00940000164009 Hyrax MODERN SPECIES 9166 C1GALT1 (ENSPCAG00000005835) #22 Elephant MODERN SPECIES 428 SGCE (ENSLAFG00000001299) PPP1R9A (ENSLAFG00000005029) PON1 (ENSLAFG00000005035) ##8 PON3 (ENSLAFG00000005041) #7 PON2 (ENSLAFG00000005043) #8 ASB4 (ENSLAFG00000007164) #9 PDK4 (ENSLAFG00000011165) #10 DYNC1I1 (ENSLAFG00000018441) #11 SLC25A13 (ENSLAFG00000018445) #12 SEM1 (ENSLAFG00000012653) #13 DLX6 (ENSLAFG00000018015) #15 DLX5 (ENSLAFG00000022895) #17 ENSLAFG00000031515 #18 TAC1 (ENSLAFG00000000907) #20 ASNS (ENSLAFG00000000909) #21 C1GALT1 (ENSLAFG00000000063) #22 MIOS (ENSLAFG00000005091) #24 GLCCI1 (ENSLAFG00000005261) #27 ICA1 (ENSLAFG00000005267) #28 NXPH1 (ENSLAFG00000014369) #29 PHF14 (ENSLAFG00000000589) #32 THSD7A (ENSLAFG00000001777) #33 TMEM106B (ENSLAFG00000002348) #34 SCIN (ENSLAFG00000014843) #37 ARL4A (ENSLAFG00000022094) ENSLAFG00000026511 ENSLAFG00000031984 ETV1 (ENSLAFG00000008175) DGKB (ENSLAFG00000014322) AGMO (ENSLAFG00000009626) MEOX2 (ENSLAFG00000026831) Tenrec DUPLICATION Tenrec MODERN SPECIES 16734 C1GALT1 (ENSETEG00000001655) #22 Tenrec MODERN SPECIES 17833 ENSETEG00000010328 #22 Marsupialia ANCESTRAL SPECIES 4 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032.i #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT00940000160835 #35 ENSGT01100000263477.F ENSGT00940000159083 #37 Diprotodontia ANCESTRAL SPECIES 18 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032.i #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 ENSGT00940000154546 Diprotodontia_a ANCESTRAL SPECIES 20 ENSGT00950000183173.P ENSGT00940000155538 ENSGT00390000008932.c.a.b ##8 ENSGT00390000008932.c.b #7 ENSGT00390000008932.c.a.a #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032.i #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268.d #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000163868 ENSGT01100000263477.F ENSGT00940000159083 #37 ENSGT00940000154546 Common wonbat MODERN SPECIES 436 SGCE (ENSVURG00010024788) ENSVURG00010024800 PPP1R9A (ENSVURG00010024802) PON1 (ENSVURG00010024803) ##8 PON3 (ENSVURG00010024804) #7 PON2 (ENSVURG00010000281) #8 ASB4 (ENSVURG00010000290) #9 PDK4 (ENSVURG00010000317) #10 DYNC1I1 (ENSVURG00010000355) #11 SLC25A13 (ENSVURG00010000424) #12 SEM1 (ENSVURG00010000463) #13 DLX5 (ENSVURG00010000514) #17 SDHAF3 (ENSVURG00010000537) TAC1 (ENSVURG00010000552) #20 ASNS (ENSVURG00010000625) #21 ENSVURG00010000712 #22 koala MODERN SPECIES 80 ENSPCIG00000028966 PPP1R9A (ENSPCIG00000028965) PON1 (ENSPCIG00000028964) ##8 PON3 (ENSPCIG00000028963) #7 PON2 (ENSPCIG00000028961) #8 ASB4 (ENSPCIG00000028960) #9 PDK4 (ENSPCIG00000037009) #10 DYNC1I1 (ENSPCIG00000028957) #11 SLC25A13 (ENSPCIG00000028956) #12 SEM1 (ENSPCIG00000028955) #13 DLX6 (ENSPCIG00000037141) #15 DLX5 (ENSPCIG00000002894) #17 SDHAF3 (ENSPCIG00000002889) TAC1 (ENSPCIG00000020833) #20 ASNS (ENSPCIG00000020832) #21 C1GALT1 (ENSPCIG00000020829) #22 COL28A1 (ENSPCIG00000032724) #23 MIOS (ENSPCIG00000020823) #24 RPA3 (ENSPCIG00000020822) #25 UMAD1 (ENSPCIG00000020820) #26 GLCCI1 (ENSPCIG00000020819) #27 ICA1 (ENSPCIG00000020818) #28 NXPH1 (ENSPCIG00000010638) #29 ENSPCIG00000037019 #31 PHF14 (ENSPCIG00000025221) #32 THSD7A (ENSPCIG00000025228) #33 TMEM106B (ENSPCIG00000011692) #34 ENSPCIG00000011694 ENSPCIG00000011698 SCIN (ENSPCIG00000029348) #37 ARL4A (ENSPCIG00000029346) Tasmanian devil MODERN SPECIES 4 PPP1R9A (ENSSHAG00000003936) PON1 (ENSSHAG00000026197) ##8 PON3 (ENSSHAG00000005610) #7 PON2 (ENSSHAG00000031204) #8 ASB4 (ENSSHAG00000000823) #9 PDK4 (ENSSHAG00000028765) #10 ENSSHAG00000021828 #11 ENSSHAG00000021760 #11 SLC25A13 (ENSSHAG00000007428) #12 ENSSHAG00000022755 DLX6 (ENSSHAG00000022084) #15 DLX5 (ENSSHAG00000005736) #17 SDHAF3 (ENSSHAG00000023133) ENSSHAG00000007629 #20 ENSSHAG00000023951 #21 ENSSHAG00000006557 #22 ENSSHAG00000028708 RPA3 (ENSSHAG00000031612) #25 ENSSHAG00000005342 #26 ENSSHAG00000024581 #24 ENSSHAG00000021268 #27 ENSSHAG00000025497 #28 NXPH1 (ENSSHAG00000026050) #29 PHF14 (ENSSHAG00000009940) #32 THSD7A (ENSSHAG00000011210) #33 TMEM106B (ENSSHAG00000014059) #34 ENSSHAG00000014230 #35 ENSSHAG00000014425 SCIN (ENSSHAG00000002165) #37 ARL4A (ENSSHAG00000027772) ENSSHAG00000027735 Platypus MODERN SPECIES 19 SGCE (ENSOANG00000004259) ENSOANG00000022299 PON3 (ENSOANG00000048302) #7 ASB4 (ENSOANG00000048426) #9 PDK4 (ENSOANG00000014566) #10 DYNC1I1 (ENSOANG00000041794) #11 SLC25A13 (ENSOANG00000048992) #12 ENSOANG00000012499 ENSOANG00000045107 #15 DLX5 (ENSOANG00000039263) #17 TAC1 (ENSOANG00000042300) #20 ENSOANG00000047770 #21 ENSOANG00000039867 ENSOANG00000042416 #21 ENSOANG00000030126 C1GALT1 (ENSOANG00000037417) #22 MIOS (ENSOANG00000050544) #24 RPA3 (ENSOANG00000041840) #25 UMAD1 (ENSOANG00000038240) #26 ENSOANG00000046547 #27 ICA1 (ENSOANG00000005251) #28 ENSOANG00000037100 #31 ENSOANG00000048822 THSD7A (ENSOANG00000006331) #33 TMEM106B (ENSOANG00000010645) #34 SCIN (ENSOANG00000005761) #37 ARL4A (ENSOANG00000011765) ETV1 (ENSOANG00000005765) DGKB (ENSOANG00000008788) AGMO (ENSOANG00000029831) MEOX2 (ENSOANG00000050568) Sauria ANCESTRAL SPECIES 15 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT01090000260278 ENSGT00940000161647 #23 ENSGT00940000163195.A ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 Lepidosauria ANCESTRAL SPECIES 5 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 tuatara DUPLICATION tuatara MODERN SPECIES 1472 TAC1 (ENSSPUG00000007762) #20 ENSSPUG00000007780 #21 ENSSPUG00000007797 #22 COL28A1 (ENSSPUG00000007810) #23 MIOS (ENSSPUG00000007839) #24 RPA3 (ENSSPUG00000007869) #25 UMAD1 (ENSSPUG00000007890) #26 GLCCI1 (ENSSPUG00000007899) #27 ENSSPUG00000007905 #28 ENSSPUG00000007916 #28 NXPH1 (ENSSPUG00000007926) #29 tuatara MODERN SPECIES 423 ACKR2 (ENSSPUG00000000782) HIGD1A (ENSSPUG00000000788) CCDC13 (ENSSPUG00000000798) HHATL (ENSSPUG00000000906) KLHL40 (ENSSPUG00000001118) ENSSPUG00000001186 ENSSPUG00000001197 SEC22C (ENSSPUG00000001233) VIPR1 (ENSSPUG00000001247) ENSSPUG00000001315 ADCYAP1R1 (ENSSPUG00000001377) GHRHR (ENSSPUG00000001441) AQP1 (ENSSPUG00000001522) MINDY4 (ENSSPUG00000001569) ENSSPUG00000001713 #21 ENSSPUG00000001725 #22 ENSSPUG00000001736 ESYT2 (ENSSPUG00000001744) CRHR2 (ENSSPUG00000001768) ENSSPUG00000001809 ENSSPUG00000001815 CTDSPL (ENSSPUG00000001824) VILL (ENSSPUG00000001837) ENSSPUG00000001871 Episquamata ANCESTRAL SPECIES 5 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 Laterata ANCESTRAL SPECIES 10 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032.g #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b.u #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 Common wall lizard MODERN SPECIES 3 CASD1 (ENSPMRG00000017616) SGCE (ENSPMRG00000017680) PPP1R9A (ENSPMRG00000017863) ENSPMRG00000017887 ENSPMRG00000017894 #8 PDK4 (ENSPMRG00000017905) #10 DYNC1I1 (ENSPMRG00000017921) #11 SLC25A13 (ENSPMRG00000017949) #12 ENSPMRG00000017990 ENSPMRG00000017993 DLX6 (ENSPMRG00000017995) #15 DLX5 (ENSPMRG00000018000) #17 SDHAF3 (ENSPMRG00000018004) TAC1 (ENSPMRG00000018010) #20 ASNS (ENSPMRG00000018015) #21 C1GALT1 (ENSPMRG00000018020) #22 ENSPMRG00000018022 COL28A1 (ENSPMRG00000018027) #23 MIOS (ENSPMRG00000018062) #24 RPA3 (ENSPMRG00000018073) #25 UMAD1 (ENSPMRG00000018081) #26 GLCCI1 (ENSPMRG00000018086) #27 ENSPMRG00000018105 #28 NXPH1 (ENSPMRG00000018131) #29 ENSPMRG00000018144 ENSPMRG00000018151 PHF14 (ENSPMRG00000018197) #32 THSD7A (ENSPMRG00000015454) #33 ENSPMRG00000015479 ENSPMRG00000015484 TMEM106B (ENSPMRG00000015496) #34 Argentine black and white tegu MODERN SPECIES 5 SGCE (ENSSMRG00000009487) PPP1R9A (ENSSMRG00000008639) ENSSMRG00000008637 #8 ENSSMRG00000008634 #8 ASB4 (ENSSMRG00000008633) #9 PDK4 (ENSSMRG00000008630) #10 ENSSMRG00000008629 #11 ENSSMRG00000008613 #11 SLC25A13 (ENSSMRG00000008612) #12 SEM1 (ENSSMRG00000008574) #13 DLX6 (ENSSMRG00000008556) #15 DLX5 (ENSSMRG00000008554) #17 SDHAF3 (ENSSMRG00000008552) TAC1 (ENSSMRG00000008547) #20 ASNS (ENSSMRG00000008534) #21 C1GALT1 (ENSSMRG00000008532) #22 COL28A1 (ENSSMRG00000008525) #23 MIOS (ENSSMRG00000008433) #24 RPA3 (ENSSMRG00000008429) #25 UMAD1 (ENSSMRG00000008424) #26 GLCCI1 (ENSSMRG00000008411) #27 ICA1 (ENSSMRG00000008368) #28 NXPH1 (ENSSMRG00000008325) #29 ENSSMRG00000008303 ENSSMRG00000008300 PHF14 (ENSSMRG00000008287) #32 THSD7A (ENSSMRG00000008280) #33 ENSSMRG00000008266 TMEM106B (ENSSMRG00000008257) #34 ENSSMRG00000008253 VWDE (ENSSMRG00000008241) #35 Toxicofera ANCESTRAL SPECIES 4 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000166910 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 Elapidae ANCESTRAL SPECIES 5 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 ENSGT00940000159770 ENSGT00440000033807 Elapidae_a ANCESTRAL SPECIES 19 ENSGT00390000007741.a ENSGT00940000157416.q ENSGT00950000183070.a.b.eb ENSGT00730000110974 ENSGT00950000182883.a.a ##29 ENSGT00940000154376.b ENSGT00940000157900 ENSGT00950000183046.a.b ##27 ENSGT00940000157744.i ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923.a #32 ENSGT00940000156923.b #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123.g ENSGT00940000159770 Acanthophiinae ANCESTRAL SPECIES 19 ENSGT00940000161380.c ENSGT00390000007741.a ENSGT00940000157416.q ENSGT00950000183070.a.b.eb ENSGT00730000110974 ENSGT00950000182883.a.a ##29 ENSGT00940000154376.b ENSGT00940000157900 ENSGT00950000183046.a.b ##27 ENSGT00940000157744.i ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000156923.b #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT01030000235340 ENSGT00940000157123.g ENSGT00940000159770 Eastern brown snake MODERN SPECIES 31 SGCE (ENSPTXG00000005081) PPP1R9A (ENSPTXG00000005898) ENSPTXG00000013557 #8 ENSPTXG00000013587 ASB4 (ENSPTXG00000013589) #9 PDK4 (ENSPTXG00000013594) #10 DYNC1I1 (ENSPTXG00000013603) #11 SLC25A13 (ENSPTXG00000013613) #12 SEM1 (ENSPTXG00000013617) #13 ENSPTXG00000013619 DLX6 (ENSPTXG00000013622) #15 DLX5 (ENSPTXG00000013626) #17 SDHAF3 (ENSPTXG00000013630) TAC1 (ENSPTXG00000013634) #20 ASNS (ENSPTXG00000013639) #21 C1GALT1 (ENSPTXG00000013643) #22 ENSPTXG00000013646 #23 MIOS (ENSPTXG00000013649) #24 RPA3 (ENSPTXG00000013652) #25 UMAD1 (ENSPTXG00000013654) #26 GLCCI1 (ENSPTXG00000013657) #27 ICA1 (ENSPTXG00000013661) #28 NXPH1 (ENSPTXG00000013666) #29 PHF14 (ENSPTXG00000013670) #32 THSD7A (ENSPTXG00000013681) #33 TMEM106B (ENSPTXG00000013688) #34 SCIN (ENSPTXG00000013690) #37 ARL4A (ENSPTXG00000013691) ENSPTXG00000013692 ETV1 (ENSPTXG00000013695) DGKB (ENSPTXG00000013708) Mainland tiger snake MODERN SPECIES 76 SGCE (ENSNSUG00000008644) PPP1R9A (ENSNSUG00000008631) ENSNSUG00000008630 #8 ASB4 (ENSNSUG00000008629) #9 PDK4 (ENSNSUG00000008628) #10 ENSNSUG00000008625 #11 ENSNSUG00000008621 #11 SLC25A13 (ENSNSUG00000006540) #12 SEM1 (ENSNSUG00000006537) #13 DLX6 (ENSNSUG00000006536) #15 DLX5 (ENSNSUG00000006534) #17 SDHAF3 (ENSNSUG00000006533) ENSNSUG00000006532 TAC1 (ENSNSUG00000006529) #20 ASNS (ENSNSUG00000006526) #21 C1GALT1 (ENSNSUG00000006525) #22 Blue-lipped sea krait MODERN SPECIES 425 TAC1 (ENSLLTG00000001092) #20 ASNS (ENSLLTG00000001100) #21 C1GALT1 (ENSLLTG00000001115) #22 Indian cobra MODERN SPECIES 337 CASD1 (ENSNNAG00000015965) SGCE (ENSNNAG00000015989) ENSNNAG00000016247 ENSNNAG00000016258 #8 ASB4 (ENSNNAG00000016270) #9 PDK4 (ENSNNAG00000016287) #10 DYNC1I1 (ENSNNAG00000016316) #11 ENSNNAG00000016365 SLC25A13 (ENSNNAG00000016372) #12 SEM1 (ENSNNAG00000016383) #13 DLX6 (ENSNNAG00000016387) #15 DLX5 (ENSNNAG00000016396) #17 SDHAF3 (ENSNNAG00000016403) TAC1 (ENSNNAG00000016404) #20 ASNS (ENSNNAG00000016411) #21 C1GALT1 (ENSNNAG00000016419) #22 MIOS (ENSNNAG00000016426) #24 RPA3 (ENSNNAG00000016439) #25 UMAD1 (ENSNNAG00000016445) #26 GLCCI1 (ENSNNAG00000016456) #27 ICA1 (ENSNNAG00000016469) #28 NXPH1 (ENSNNAG00000016483) #29 PHF14 (ENSNNAG00000016495) #32 THSD7A (ENSNNAG00000016564) #33 TMEM106B (ENSNNAG00000016682) #34 SCIN (ENSNNAG00000016731) #37 ARL4A (ENSNNAG00000017228) ETV1 (ENSNNAG00000017233) DGKB (ENSNNAG00000017251) AGMO (ENSNNAG00000017348) MEOX2 (ENSNNAG00000017426) Lizard MODERN SPECIES 5 CASD1 (ENSACAG00000013610) SGCE (ENSACAG00000013695) PPP1R9A (ENSACAG00000027389) ENSACAG00000013907 #8 ASB4 (ENSACAG00000013993) #9 PDK4 (ENSACAG00000014020) #10 DYNC1I1 (ENSACAG00000014180) #11 SLC25A13 (ENSACAG00000014580) #12 ENSACAG00000014686 DLX6 (ENSACAG00000014705) #15 DLX5 (ENSACAG00000014717) #17 SDHAF3 (ENSACAG00000044650) TAC1 (ENSACAG00000042882) #20 ENSACAG00000041082 ASNS (ENSACAG00000012961) #21 C1GALT1 (ENSACAG00000013040) #22 RPA3 (ENSACAG00000013055) #25 COL28A1 (ENSACAG00000013078) #23 MIOS (ENSACAG00000013133) #24 UMAD1 (ENSACAG00000013178) #26 ENSACAG00000039302 #27 ENSACAG00000037644 ENSACAG00000013179 #27 ICA1 (ENSACAG00000013214) #28 ENSACAG00000042565 NXPH1 (ENSACAG00000013252) #29 ENSACAG00000039259 PHF14 (ENSACAG00000013266) #32 THSD7A (ENSACAG00000013316) #33 TMEM106B (ENSACAG00000043453) #34 ENSACAG00000013446 Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT01090000260278 ENSGT00940000161647 #23 ENSGT00940000163195.A ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 Archosauria ANCESTRAL SPECIES ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT01090000260278 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 Aves ANCESTRAL SPECIES 5 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT01090000260278 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 Neognathae ANCESTRAL SPECIES ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 Neognathae_b ANCESTRAL SPECIES 9 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 Neognathae_c ANCESTRAL SPECIES 12 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000166910 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 Golden eagle MODERN SPECIES 19 CASD1 (ENSACCG00020000568) SGCE (ENSACCG00020000514) PPP1R9A (ENSACCG00020000421) ENSACCG00020000364 #8 ASB4 (ENSACCG00020000336) #9 PDK4 (ENSACCG00020000315) #10 DYNC1I1 (ENSACCG00020010997) #11 SLC25A13 (ENSACCG00020010955) #12 SEM1 (ENSACCG00020010928) #13 DLX6 (ENSACCG00020010921) #15 DLX5 (ENSACCG00020010911) #17 ENSACCG00020010901 #18 ENSACCG00020010893 TAC1 (ENSACCG00020010882) #20 ASNS (ENSACCG00020010865) #21 C1GALT1 (ENSACCG00020010856) #22 MIOS (ENSACCG00020010836) #24 RPA3 (ENSACCG00020010817) #25 UMAD1 (ENSACCG00020010808) #26 GLCCI1 (ENSACCG00020010798) #27 ICA1 (ENSACCG00020010768) #28 NXPH1 (ENSACCG00020010742) #29 NDUFA4 (ENSACCG00020010730) #31 PHF14 (ENSACCG00020010677) #32 THSD7A (ENSACCG00020010523) #33 TMEM106B (ENSACCG00020010387) #34 ENSACCG00020010372 ENSACCG00020010340 SCIN (ENSACCG00020010112) #37 ARL4A (ENSACCG00020009854) ETV1 (ENSACCG00020009837) Kakapo MODERN SPECIES ENSSHBG00005015623 COL1A2 (ENSSHBG00005015632) CASD1 (ENSSHBG00005015652) SGCE (ENSSHBG00005015666) PPP1R9A (ENSSHBG00005015679) ENSSHBG00005015683 #8 ASB4 (ENSSHBG00005015685) #9 PDK4 (ENSSHBG00005015690) #10 DYNC1I1 (ENSSHBG00005015696) #11 SLC25A13 (ENSSHBG00005015712) #12 SEM1 (ENSSHBG00005015718) #13 DLX6 (ENSSHBG00005015722) #15 DLX5 (ENSSHBG00005015726) #17 ENSSHBG00005015729 #18 ASNS (ENSSHBG00005015739) #21 C1GALT1 (ENSSHBG00005015747) #22 MIOS (ENSSHBG00005015771) #24 RPA3 (ENSSHBG00005015776) #25 UMAD1 (ENSSHBG00005015781) #26 GLCCI1 (ENSSHBG00005015789) #27 ICA1 (ENSSHBG00005015798) #28 NXPH1 (ENSSHBG00005015803) #29 NDUFA4 (ENSSHBG00005000472) #31 PHF14 (ENSSHBG00005001278) #32 THSD7A (ENSSHBG00005001460) #33 TMEM106B (ENSSHBG00005001699) #34 ENSSHBG00005001720 ENSSHBG00005001778 ENSSHBG00005001869 SCIN (ENSSHBG00005002072) #37 ARL4A (ENSSHBG00005002520) Passeriformes ANCESTRAL SPECIES ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 Great tit MODERN SPECIES 11 CASD1 (ENSPMJG00000009752) SGCE (ENSPMJG00000009763) PPP1R9A (ENSPMJG00000009922) ENSPMJG00000009926 #8 ASB4 (ENSPMJG00000009928) #9 PDK4 (ENSPMJG00000009929) #10 DYNC1I1 (ENSPMJG00000010005) #11 SLC25A13 (ENSPMJG00000010007) #12 SEM1 (ENSPMJG00000010043) #13 DLX6 (ENSPMJG00000010051) #15 ENSPMJG00000010054 DLX5 (ENSPMJG00000010058) #17 SDHAF3 (ENSPMJG00000010062) TAC1 (ENSPMJG00000010075) #20 ASNS (ENSPMJG00000010078) #21 C1GALT1 (ENSPMJG00000010079) #22 COL28A1 (ENSPMJG00000010080) #23 MIOS (ENSPMJG00000010119) #24 RPA3 (ENSPMJG00000010124) #25 UMAD1 (ENSPMJG00000010125) #26 GLCCI1 (ENSPMJG00000010126) #27 ICA1 (ENSPMJG00000010171) #28 NXPH1 (ENSPMJG00000010172) #29 NDUFA4 (ENSPMJG00000010215) #31 PHF14 (ENSPMJG00000010302) #32 THSD7A (ENSPMJG00000010379) #33 TMEM106B (ENSPMJG00000010740) #34 ENSPMJG00000010741 VWDE (ENSPMJG00000010743) #35 SCIN (ENSPMJG00000010748) #37 ARL4A (ENSPMJG00000010749) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 Flycatcher MODERN SPECIES 11 COL1A2 (ENSFALG00000010356) CASD1 (ENSFALG00000010341) SGCE (ENSFALG00000023681) PPP1R9A (ENSFALG00000010302) ENSFALG00000025037 #8 ASB4 (ENSFALG00000010284) #9 PDK4 (ENSFALG00000010276) #10 DYNC1I1 (ENSFALG00000010272) #11 SLC25A13 (ENSFALG00000010269) #12 ENSFALG00000010266 DLX6 (ENSFALG00000027921) #15 DLX5 (ENSFALG00000010250) #17 ENSFALG00000026107 #18 TAC1 (ENSFALG00000026276) #20 ASNS (ENSFALG00000010229) #21 C1GALT1 (ENSFALG00000026918) #22 COL28A1 (ENSFALG00000010204) #23 MIOS (ENSFALG00000010192) #24 RPA3 (ENSFALG00000024130) #25 UMAD1 (ENSFALG00000010182) #26 GLCCI1 (ENSFALG00000025095) #27 ICA1 (ENSFALG00000010171) #28 NXPH1 (ENSFALG00000027255) #29 NDUFA4 (ENSFALG00000010164) #31 PHF14 (ENSFALG00000010161) #32 THSD7A (ENSFALG00000010122) #33 TMEM106B (ENSFALG00000023181) #34 ENSFALG00000010097 ENSFALG00000010086 SCIN (ENSFALG00000010028) #37 ARL4A (ENSFALG00000014498) Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 Common canary MODERN SPECIES 5 SGCE (ENSSCAG00000013022) PPP1R9A (ENSSCAG00000013038) ENSSCAG00000013053 #8 ASB4 (ENSSCAG00000013057) #9 PDK4 (ENSSCAG00000013066) #10 ENSSCAG00000013068 DYNC1I1 (ENSSCAG00000013082) #11 SLC25A13 (ENSSCAG00000013088) #12 SEM1 (ENSSCAG00000013093) #13 ENSSCAG00000013109 DLX6 (ENSSCAG00000013113) #15 DLX5 (ENSSCAG00000013115) #17 ENSSCAG00000013121 #18 TAC1 (ENSSCAG00000013128) #20 ASNS (ENSSCAG00000013137) #21 C1GALT1 (ENSSCAG00000013144) #22 COL28A1 (ENSSCAG00000013153) #23 MIOS (ENSSCAG00000013169) #24 RPA3 (ENSSCAG00000013219) #25 UMAD1 (ENSSCAG00000013229) #26 GLCCI1 (ENSSCAG00000013239) #27 ICA1 (ENSSCAG00000013253) #28 NXPH1 (ENSSCAG00000013284) #29 NDUFA4 (ENSSCAG00000013301) #31 PHF14 (ENSSCAG00000013350) #32 THSD7A (ENSSCAG00000013439) #33 TMEM106B (ENSSCAG00000013596) #34 ENSSCAG00000013602 VWDE (ENSSCAG00000013605) #35 ENSSCAG00000013611 SCIN (ENSSCAG00000013616) #37 Zebra finch MODERN SPECIES 12 CASD1 (ENSTGUG00000001556) SGCE (ENSTGUG00000001558) PPP1R9A (ENSTGUG00000001566) ENSTGUG00000001577 #8 ASB4 (ENSTGUG00000001584) #9 DYNC1I1 (ENSTGUG00000001589) #11 PDK4 (ENSTGUG00000001585) #10 SLC25A13 (ENSTGUG00000001620) #12 ENSTGUG00000026321 SEM1 (ENSTGUG00000024983) #13 DLX6 (ENSTGUG00000001642) #15 DLX5 (ENSTGUG00000001643) #17 ENSTGUG00000001650 #18 TAC1 (ENSTGUG00000001652) #20 ASNS (ENSTGUG00000001657) #21 C1GALT1 (ENSTGUG00000001666) #22 ENSTGUG00000022931 MIOS (ENSTGUG00000001673) #24 RPA3 (ENSTGUG00000024492) #25 UMAD1 (ENSTGUG00000026086) #26 GLCCI1 (ENSTGUG00000001680) #27 ICA1 (ENSTGUG00000001684) #28 NXPH1 (ENSTGUG00000001692) #29 PHF14 (ENSTGUG00000002383) #32 THSD7A (ENSTGUG00000002402) #33 TMEM106B (ENSTGUG00000025976) #34 ENSTGUG00000002424 ENSTGUG00000024826 #35 ENSTGUG00000002432 SCIN (ENSTGUG00000002439) #37 ARL4A (ENSTGUG00000002488) Medium ground finch MODERN SPECIES 10 CASD1 (ENSGFOG00000001162) SGCE (ENSGFOG00000001144) PPP1R9A (ENSGFOG00000001092) ENSGFOG00000001066 #8 ASB4 (ENSGFOG00000001056) #9 PDK4 (ENSGFOG00000001010) #10 DYNC1I1 (ENSGFOG00000000981) #11 SLC25A13 (ENSGFOG00000000964) #12 ENSGFOG00000000956 ENSGFOG00000000950 DLX6 (ENSGFOG00000000946) #15 DLX5 (ENSGFOG00000000938) #17 ENSGFOG00000000918 ENSGFOG00000000913 ASNS (ENSGFOG00000000899) #21 C1GALT1 (ENSGFOG00000000893) #22 ENSGFOG00000000884 MIOS (ENSGFOG00000000875) #24 ENSGFOG00000000868 UMAD1 (ENSGFOG00000000863) #26 GLCCI1 (ENSGFOG00000000857) #27 ICA1 (ENSGFOG00000000839) #28 NXPH1 (ENSGFOG00000000831) #29 NDUFA4 (ENSGFOG00000000823) #31 PHF14 (ENSGFOG00000000775) #32 THSD7A (ENSGFOG00000000750) #33 TMEM106B (ENSGFOG00000000739) #34 ENSGFOG00000000731 ENSGFOG00000000725 #35 ENSGFOG00000000707 SCIN (ENSGFOG00000000439) #37 Galloanserae ANCESTRAL SPECIES ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538.bb ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083 #37 ENSGT00940000154546 Anatidae ANCESTRAL SPECIES 1 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538.bb ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00940000163195.A ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083 #37 Pink-footed goose MODERN SPECIES CASD1 (ENSABRG00000007011) SGCE (ENSABRG00000006848) PPP1R9A (ENSABRG00000004918) ENSABRG00000004054 #8 ASB4 (ENSABRG00000003971) #9 PDK4 (ENSABRG00000003915) #10 DYNC1I1 (ENSABRG00000003856) #11 SLC25A13 (ENSABRG00000003825) #12 SEM1 (ENSABRG00000003776) #13 DLX6 (ENSABRG00000003722) #15 DLX5 (ENSABRG00000003682) #17 ENSABRG00000003628 ENSABRG00000003501 TAC1 (ENSABRG00000003448) #20 ASNS (ENSABRG00000003387) #21 C1GALT1 (ENSABRG00000003357) #22 MIOS (ENSABRG00000003185) #24 RPA3 (ENSABRG00000003123) #25 UMAD1 (ENSABRG00000003104) #26 GLCCI1 (ENSABRG00000003079) #27 ICA1 (ENSABRG00000002965) #28 ENSABRG00000002883 NXPH1 (ENSABRG00000002853) #29 ENSABRG00000002814 NDUFA4 (ENSABRG00000002660) #31 PHF14 (ENSABRG00000002155) #32 THSD7A (ENSABRG00000001172) #33 ENSABRG00000000971 TMEM106B (ENSABRG00000000832) #34 ENSABRG00000000738 VWDE (ENSABRG00000000536) #35 Duck MODERN SPECIES 10 ENSAPLG00000014577 ENSAPLG00000017093 ENSAPLG00000014945 #8 ASB4 (ENSAPLG00000015492) #9 PDK4 (ENSAPLG00000015678) #10 ENSAPLG00000031095 DYNC1I1 (ENSAPLG00000015780) #11 ENSAPLG00000029549 SLC25A13 (ENSAPLG00000015909) #12 SEM1 (ENSAPLG00000019053) #13 DLX6 (ENSAPLG00000016266) #15 DLX5 (ENSAPLG00000024281) #17 ENSAPLG00000002256 #18 ENSAPLG00000016294 #20 ASNS (ENSAPLG00000016311) #21 C1GALT1 (ENSAPLG00000029207) #22 ENSAPLG00000031039 #23 ENSAPLG00000001777 ENSAPLG00000030634 MIOS (ENSAPLG00000002570) #24 RPA3 (ENSAPLG00000027160) #25 UMAD1 (ENSAPLG00000002260) #26 GLCCI1 (ENSAPLG00000002840) #27 ICA1 (ENSAPLG00000003010) #28 NXPH1 (ENSAPLG00000024881) #29 NDUFA4 (ENSAPLG00000016250) #31 PHF14 (ENSAPLG00000016105) #32 THSD7A (ENSAPLG00000005027) #33 TMEM106B (ENSAPLG00000005362) #34 ENSAPLG00000005807 VWDE (ENSAPLG00000005813) #35 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000155639 ENSGT00390000004037.g ENSGT00390000005672.a.b ENSGT00940000155538.bb ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000164236 #18 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083.j #37 ENSGT00940000154546 Japanese quail MODERN SPECIES 11 COL1A2 (ENSCJPG00005009957) CASD1 (ENSCJPG00005011435) SGCE (ENSCJPG00005011442) PPP1R9A (ENSCJPG00005011457) ENSCJPG00005011468 #8 ASB4 (ENSCJPG00005011472) #9 PDK4 (ENSCJPG00005011473) #10 DYNC1I1 (ENSCJPG00005011488) #11 SLC25A13 (ENSCJPG00005011503) #12 ENSCJPG00005011510 DLX6 (ENSCJPG00005011514) #15 DLX5 (ENSCJPG00005011516) #17 ENSCJPG00005011519 #18 TAC1 (ENSCJPG00005011522) #20 ASNS (ENSCJPG00005011523) #21 C1GALT1 (ENSCJPG00005011527) #22 COL28A1 (ENSCJPG00005011528) #23 MIOS (ENSCJPG00005011529) #24 RPA3 (ENSCJPG00005011530) #25 UMAD1 (ENSCJPG00005011535) #26 GLCCI1 (ENSCJPG00005011533) #27 ICA1 (ENSCJPG00005011548) #28 NXPH1 (ENSCJPG00005011550) #29 ENSCJPG00005011556 NDUFA4 (ENSCJPG00005011574) #31 PHF14 (ENSCJPG00005011597) #32 THSD7A (ENSCJPG00005011603) #33 TMEM106B (ENSCJPG00005011767) #34 ENSCJPG00005011768 VWDE (ENSCJPG00005011777) #35 SCIN (ENSCJPG00005011785) #37 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000155639 ENSGT00390000004037.g ENSGT00390000005672.a.b ENSGT00940000155538.bb ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00940000175476 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00940000165163 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000165119 ENSGT00940000160835 #35 ENSGT00940000159083.j #37 ENSGT00940000154546 Chicken MODERN SPECIES 11 CASD1 (ENSGALG00010003366) SGCE (ENSGALG00010003489) PPP1R9A (ENSGALG00010002868) PON1 (ENSGALG00010002904) #8 ASB4 (ENSGALG00010002928) #9 PDK4 (ENSGALG00010002741) #10 DYNC1I1 (ENSGALG00010003506) #11 SLC25A13 (ENSGALG00010003666) #12 SHFM1 (ENSGALG00010002817) #13 ENSGALG00010002944 DLX6 (ENSGALG00010002948) #15 DLX5 (ENSGALG00010002959) #17 ENSGALG00010002838 TAC1 (ENSGALG00010003334) #20 ASNS (ENSGALG00010003382) #21 C1GALT1 (ENSGALG00010003406) #22 COL28A1 (ENSGALG00010003903) #23 MIOS (ENSGALG00010003915) #24 RPA3 (ENSGALG00010003923) UMAD1 (ENSGALG00010003962) #26 GLCCI1 (ENSGALG00010003982) #27 ICA1 (ENSGALG00010003990) #28 NXPH1 (ENSGALG00010002824) #29 NDUFA4 (ENSGALG00010002752) #31 PHF14 (ENSGALG00010003851) #32 THSD7A (ENSGALG00010003895) #33 TMEM106B (ENSGALG00010002922) #34 ENSGALG00010002930 VWDE (ENSGALG00010002934) #35 SCIN (ENSGALG00010003027) #37 ARL4A (ENSGALG00010004029) Turkey MODERN SPECIES 26 ENSMGAG00000005583 ENSMGAG00000021576 ENSMGAG00000009895 #37 ENSMGAG00000019635 #37 ENSMGAG00000009979 ENSMGAG00000010005 ENSMGAG00000009883 #34 ENSMGAG00000009862 #33 ENSMGAG00000009846 #32 ENSMGAG00000009843 #31 ENSMGAG00000009840 #29 ENSMGAG00000020961 #28 ENSMGAG00000009821 #27 ENSMGAG00000022836 MIOS (ENSMGAG00000009808) #24 ENSMGAG00000009765 #22 ENSMGAG00000009768 #23 ENSMGAG00000009747 #21 ENSMGAG00000009740 #20 ENSMGAG00000019622 #18 ENSMGAG00000009738 #17 ENSMGAG00000021462 #17 ENSMGAG00000016039 #15 ENSMGAG00000009695 #12 ENSMGAG00000009657 #11 ENSMGAG00000018605 #11 ENSMGAG00000009599 #9 ENSMGAG00000009610 #10 ENSMGAG00000009564 #8 ENSMGAG00000017973 ENSMGAG00000009555 African ostrich MODERN SPECIES 583 COL1A2 (ENSSCUG00000012794) CASD1 (ENSSCUG00000012828) SGCE (ENSSCUG00000012834) PPP1R9A (ENSSCUG00000012845) ENSSCUG00000012859 #8 ASB4 (ENSSCUG00000012862) #9 PDK4 (ENSSCUG00000012865) #10 DYNC1I1 (ENSSCUG00000012875) #11 SLC25A13 (ENSSCUG00000012884) #12 DLX6 (ENSSCUG00000012887) #15 DLX5 (ENSSCUG00000012888) #17 ENSSCUG00000012889 #18 ENSSCUG00000012891 TAC1 (ENSSCUG00000012892) #20 ASNS (ENSSCUG00000012893) #21 C1GALT1 (ENSSCUG00000012894) #22 ENSSCUG00000012895 ENSSCUG00000012896 #23 MIOS (ENSSCUG00000012900) #24 ENSSCUG00000012901 UMAD1 (ENSSCUG00000012903) #26 ENSSCUG00000012906 #27 ENSSCUG00000012908 #27 ICA1 (ENSSCUG00000012910) #28 NXPH1 (ENSSCUG00000012915) #29 Australian saltwater crocodile MODERN SPECIES CASD1 (ENSCPRG00005014236) SGCE (ENSCPRG00005014246) PPP1R9A (ENSCPRG00005014256) ENSCPRG00005014261 #8 ASB4 (ENSCPRG00005014271) #9 PDK4 (ENSCPRG00005014274) #10 DYNC1I1 (ENSCPRG00005014300) #11 SLC25A13 (ENSCPRG00005014321) #12 SEM1 (ENSCPRG00005014353) #13 DLX6 (ENSCPRG00005014378) #15 ENSCPRG00005014382 DLX5 (ENSCPRG00005014391) #17 ENSCPRG00005014395 #18 TAC1 (ENSCPRG00005014416) #20 ASNS (ENSCPRG00005014419) #21 C1GALT1 (ENSCPRG00005014427) #22 MIOS (ENSCPRG00005014456) #24 RPA3 (ENSCPRG00005014491) #25 UMAD1 (ENSCPRG00005014510) #26 GLCCI1 (ENSCPRG00005014511) #27 ICA1 (ENSCPRG00005014542) #28 NXPH1 (ENSCPRG00005014567) #29 NDUFA4 (ENSCPRG00005014588) #31 ENSCPRG00005014591 PHF14 (ENSCPRG00005014612) #32 THSD7A (ENSCPRG00005014643) #33 ENSCPRG00005014652 VWDE (ENSCPRG00005014660) #35 ENSCPRG00005014664 SCIN (ENSCPRG00005014672) #37 ARL4A (ENSCPRG00005014674) Cryptodira ANCESTRAL SPECIES 4 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 ENSGT00940000154546 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b.a #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 ENSGT00940000154546 Emydidae ANCESTRAL SPECIES 34 ENSGT00940000155639 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b.a #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000166910 ENSGT00940000159083 #37 ENSGT00940000154546 ENSGT00940000157123 painted turtle MODERN SPECIES 2405 ENSCPBG00000024417 SGCE (ENSCPBG00000024415) PPP1R9A (ENSCPBG00000024414) ENSCPBG00000024412 #8 ASB4 (ENSCPBG00000024411) #9 PDK4 (ENSCPBG00000024410) #10 ENSCPBG00000024409 DYNC1I1 (ENSCPBG00000024407) #11 SLC25A13 (ENSCPBG00000024406) #12 ENSCPBG00000024403 DLX6 (ENSCPBG00000024402) #15 DLX5 (ENSCPBG00000024401) #17 SDHAF3 (ENSCPBG00000024400) TAC1 (ENSCPBG00000024399) #20 ASNS (ENSCPBG00000024398) #21 C1GALT1 (ENSCPBG00000024397) #22 COL28A1 (ENSCPBG00000024395) #23 MIOS (ENSCPBG00000024381) #24 RPA3 (ENSCPBG00000024377) #25 UMAD1 (ENSCPBG00000024376) #26 GLCCI1 (ENSCPBG00000024373) #27 ICA1 (ENSCPBG00000024369) #28 NXPH1 (ENSCPBG00000024366) #29 ENSCPBG00000024357 NDUFA4 (ENSCPBG00000024355) #31 ENSCPBG00000024353 PHF14 (ENSCPBG00000024347) #32 ENSCPBG00000024339 THSD7A (ENSCPBG00000024332) #33 TMEM106B (ENSCPBG00000024327) #34 ENSCPBG00000024323 Three-toed box turtle MODERN SPECIES 30 COL1A2 (ENSTMTG00000006595) CASD1 (ENSTMTG00000006388) SGCE (ENSTMTG00000006348) PPP1R9A (ENSTMTG00000006314) ENSTMTG00000006278 #8 ASB4 (ENSTMTG00000006250) #9 PDK4 (ENSTMTG00000006214) #10 DYNC1I1 (ENSTMTG00000006042) #11 SLC25A13 (ENSTMTG00000005981) #12 SEM1 (ENSTMTG00000005962) #13 DLX6 (ENSTMTG00000005944) #15 DLX5 (ENSTMTG00000005931) #17 SDHAF3 (ENSTMTG00000005925) TAC1 (ENSTMTG00000005910) #20 ASNS (ENSTMTG00000005883) #21 C1GALT1 (ENSTMTG00000005848) #22 ENSTMTG00000005840 #23 MIOS (ENSTMTG00000005807) #24 RPA3 (ENSTMTG00000005792) #25 UMAD1 (ENSTMTG00000005771) #26 GLCCI1 (ENSTMTG00000005752) #27 ICA1 (ENSTMTG00000005727) #28 NXPH1 (ENSTMTG00000005721) #29 NDUFA4 (ENSTMTG00000005699) #31 PHF14 (ENSTMTG00000005623) #32 THSD7A (ENSTMTG00000005525) #33 TMEM106B (ENSTMTG00000005490) #34 ENSTMTG00000005374 SCIN (ENSTMTG00000005205) #37 ENSTMTG00000005174 ETV1 (ENSTMTG00000005144) Testudinidae ANCESTRAL SPECIES 1 ENSGT00390000004037 ENSGT00390000005672.a.b ENSGT00940000155538 ENSGT00390000008932 #8 ENSGT00940000158874 #9 ENSGT01030000234646.B.a.a.a.b.a #10 ENSGT01030000234646.B.a.a.a.b.b #10 ENSGT00940000156032 #11 ENSGT00940000159344 #12 ENSGT00940000162732 #13 ENSGT00940000157683 #15 ENSGT00940000159188 #17 ENSGT00390000010029 ENSGT00390000002457 #20 ENSGT00390000001994 #21 ENSGT00940000155000 #22 ENSGT00940000161647 #23 ENSGT00390000015038 #24 ENSGT00390000008029 #25 ENSGT00390000003051 #26 ENSGT00950000183046.b #27 ENSGT00390000005530.a.b #28 ENSGT00950000182883.a.b.a #29 ENSGT00940000154268 #31 ENSGT00940000156923 #32 ENSGT00940000155427 #33 ENSGT00940000158360 #34 ENSGT00940000160835 #35 ENSGT00940000166910 ENSGT00940000159083 #37 ENSGT00940000154546 Goode s thornscrub tortoise MODERN SPECIES 11 SGCE (ENSGEVG00005017638) PPP1R9A (ENSGEVG00005018351) ENSGEVG00005018431 #8 ASB4 (ENSGEVG00005018500) #9 ENSGEVG00005018530 #10 ENSGEVG00005018552 #10 DYNC1I1 (ENSGEVG00005018591) #11 SLC25A13 (ENSGEVG00005018741) #12 ENSGEVG00005018756 SEM1 (ENSGEVG00005018763) #13 DLX6 (ENSGEVG00005018768) #15 DLX5 (ENSGEVG00005018783) #17 SDHAF3 (ENSGEVG00005018801) TAC1 (ENSGEVG00005018815) #20 ASNS (ENSGEVG00005018836) #21 C1GALT1 (ENSGEVG00005008793) #22 ENSGEVG00005008812 #23 MIOS (ENSGEVG00005008836) #24 RPA3 (ENSGEVG00005008892) #25 ENSGEVG00005008918 UMAD1 (ENSGEVG00005008972) #26 ENSGEVG00005009017 #27 ENSGEVG00005009040 #27 ICA1 (ENSGEVG00005009067) #28 NXPH1 (ENSGEVG00005009132) #29 ENSGEVG00005009145 NDUFA4 (ENSGEVG00005009177) #31 PHF14 (ENSGEVG00005009261) #32 THSD7A (ENSGEVG00005009420) #33 TMEM106B (ENSGEVG00005009672) #34 ENSGEVG00005009713 Abingdon island giant tortoise MODERN SPECIES 616 TAC1 (ENSCABG00000010311) #20 ASNS (ENSCABG00000010316) #21 C1GALT1 (ENSCABG00000010321) #22 ENSCABG00000010324 Chinese turtle MODERN SPECIES 414 ENSPSIG00000001686 COL1A2 (ENSPSIG00000014526) CASD1 (ENSPSIG00000016515) SGCE (ENSPSIG00000017123) PPP1R9A (ENSPSIG00000017277) ENSPSIG00000017556 #8 ASB4 (ENSPSIG00000017877) #9 PDK4 (ENSPSIG00000017954) #10 DYNC1I1 (ENSPSIG00000018144) #11 SLC25A13 (ENSPSIG00000018233) #12 DLX6 (ENSPSIG00000018257) #15 DLX5 (ENSPSIG00000004086) #17 SDHAF3 (ENSPSIG00000004136) TAC1 (ENSPSIG00000004143) #20 ASNS (ENSPSIG00000004206) #21 C1GALT1 (ENSPSIG00000004260) #22 ENSPSIG00000001690 ENSPSIG00000004348 MIOS (ENSPSIG00000004559) #24 RPA3 (ENSPSIG00000004581) #25 UMAD1 (ENSPSIG00000004745) #26 GLCCI1 (ENSPSIG00000004769) #27 ICA1 (ENSPSIG00000004836) #28 NXPH1 (ENSPSIG00000004912) #29 ENSPSIG00000004964 NDUFA4 (ENSPSIG00000005020) #31 PHF14 (ENSPSIG00000005120) #32 THSD7A (ENSPSIG00000006100) #33 ENSPSIG00000001699 TMEM106B (ENSPSIG00000006544) #34 SCIN (ENSPSIG00000009157) #37