Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Gnathostomata	ANCESTRAL SPECIES	46								ENSGT00940000155180.b #10	ENSGT00940000163946	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083 #26	ENSGT00940000156000	ENSGT01030000234588.b.b.a	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a	ENSGT00940000153908.a	ENSGT00440000033863
Euteleostomi	ANCESTRAL SPECIES	17		ENSGT00940000155180.b #10	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00950000182914.b	ENSGT00940000153414.B ##15	ENSGT00940000159363	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000156000	ENSGT01030000234588.b.b.a	ENSGT01030000234588.b.b.b.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a	ENSGT00940000154709.a.b.b	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878
Sarcopterygii	ANCESTRAL SPECIES	12	ENSGT00940000155867	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.a ##26	ENSGT00940000156000	ENSGT01030000234588.b.b.a	ENSGT01030000234588.b.b.b.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916
Tetrapoda	ANCESTRAL SPECIES	22	ENSGT00940000155867	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.a ##26	ENSGT00940000156000	ENSGT01030000234588.b.b.b.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a	ENSGT00940000159750	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000155197	ENSGT00390000007878	ENSGT00940000158916	ENSGT00390000011980.a
Amniota	ANCESTRAL SPECIES	44	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26
Mammalia	ANCESTRAL SPECIES	20	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298	ENSGT00510000046803.b.b	ENSGT00940000161554
Theria	ANCESTRAL SPECIES		ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Eutheria	ANCESTRAL SPECIES	1	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Pecora	ANCESTRAL SPECIES	3	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Yarkand deer	MODERN SPECIES	14	CRACR2A (ENSCHYG00000012643) #7	PARP11 (ENSCHYG00000012469) #8	ENSCHYG00000012439 #9	CCND2 (ENSCHYG00000012387) #10	TIGAR (ENSCHYG00000012318) #11	FGF23 (ENSCHYG00000012253) #12	FGF6 (ENSCHYG00000012211) #13	C12orf4 (ENSCHYG00000012034) #14	RAD51AP1 (ENSCHYG00000011912) #15	DYRK4 (ENSCHYG00000011713) #16	AKAP3 (ENSCHYG00000011669) #17	NDUFA9 (ENSCHYG00000011587) #18	GALNT8 (ENSCHYG00000011495) #19	KCNA1 (ENSCHYG00000011459) #20	ENSCHYG00000011432 #21	KCNA5 (ENSCHYG00000026449) #22	NTF3 (ENSCHYG00000026438) #23	ANO2 (ENSCHYG00000026287) #24	VWF (ENSCHYG00000026172) #25	CD9 (ENSCHYG00000026113) #26	PLEKHG6 (ENSCHYG00000026050) #27	TNFRSF1A (ENSCHYG00000025998) #28	SCNN1A (ENSCHYG00000025885) #29	LTBR (ENSCHYG00000025819) #30	CD27 (ENSCHYG00000025790) #31	ENSCHYG00000025783 #32	TAPBPL (ENSCHYG00000025766) #33	ENSCHYG00000025715 #34	ENSCHYG00000025696 #35	MRPL51 (ENSCHYG00000025676) #36	NCAPD2 (ENSCHYG00000025563) #37
Percora_a	ANCESTRAL SPECIES	3	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Bovidae	ANCESTRAL SPECIES	3	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Caprinae	ANCESTRAL SPECIES		ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00440000038159.rb.b	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.b
Goat	MODERN SPECIES	24	CRACR2A (ENSCHIG00000018141) #7	PARP11 (ENSCHIG00000020515) #8	CCND2 (ENSCHIG00000025136) #10	TIGAR (ENSCHIG00000009582) #11	FGF23 (ENSCHIG00000016812) #12	FGF6 (ENSCHIG00000013629) #13	C12orf4 (ENSCHIG00000015272) #14	RAD51AP1 (ENSCHIG00000014123) #15	DYRK4 (ENSCHIG00000025741) #16	AKAP3 (ENSCHIG00000025633) #17	NDUFA9 (ENSCHIG00000013953) #18	GALNT8 (ENSCHIG00000015042) #19	KCNA6 (ENSCHIG00000008344)	KCNA1 (ENSCHIG00000003142) #20	ENSCHIG00000013769 #21	KCNA5 (ENSCHIG00000001846) #22	NTF3 (ENSCHIG00000012334) #23	ANO2 (ENSCHIG00000016148) #24	VWF (ENSCHIG00000012979) #25	ENSCHIG00000007426	CD9 (ENSCHIG00000008887) #26	PLEKHG6 (ENSCHIG00000013835) #27	TNFRSF1A (ENSCHIG00000012735) #28	SCNN1A (ENSCHIG00000009435) #29	LTBR (ENSCHIG00000022975) #30	CD27 (ENSCHIG00000021715) #31	TAPBPL (ENSCHIG00000016665) #33	VAMP1 (ENSCHIG00000014523) #34	MRPL51 (ENSCHIG00000011385) #36	NCAPD2 (ENSCHIG00000015626) #37	ENSCHIG00000022516
Rambouillet Sheep	MODERN SPECIES	19	CRACR2A (ENSOARG00020010509) #7	PARP11 (ENSOARG00020010206) #8	CCND2 (ENSOARG00020010134) #10	TIGAR (ENSOARG00020010016) #11	FGF23 (ENSOARG00020009914) #12	FGF6 (ENSOARG00020009875) #13	C12orf4 (ENSOARG00020009827) #14	RAD51AP1 (ENSOARG00020009565) #15	DYRK4 (ENSOARG00020009465) #16	AKAP3 (ENSOARG00020009435) #17	NDUFA9 (ENSOARG00020009304) #18	GALNT8 (ENSOARG00020009207) #19	KCNA6 (ENSOARG00020009186)	KCNA1 (ENSOARG00020009166) #20	ENSOARG00020009107 #21	KCNA5 (ENSOARG00020009091) #22	NTF3 (ENSOARG00020009049) #23	ANO2 (ENSOARG00020008165) #24	VWF (ENSOARG00020006721) #25	ENSOARG00020006562	CD9 (ENSOARG00020006407) #26	PLEKHG6 (ENSOARG00020006252) #27	TNFRSF1A (ENSOARG00020006166) #28	SCNN1A (ENSOARG00020006047) #29	LTBR (ENSOARG00020005918) #30	CD27 (ENSOARG00020005885) #31	ENSOARG00020005857 #33	VAMP1 (ENSOARG00020005818) #34	MRPL51 (ENSOARG00020005788) #36	NCAPD2 (ENSOARG00020005706) #37	ENSOARG00020005655
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00940000162821.g.b	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
American bison	MODERN SPECIES	3130	PRMT8 (ENSBBBG00000012097)	CRACR2A (ENSBBBG00000012126) #7	PARP11 (ENSBBBG00000001948) #8	CCND2 (ENSBBBG00000009046) #10	TIGAR (ENSBBBG00000002287) #11	FGF6 (ENSBBBG00000012175) #13	ENSBBBG00000012182	C12orf4 (ENSBBBG00000012199) #14	RAD51AP1 (ENSBBBG00000012204) #15	DYRK4 (ENSBBBG00000012216) #16	AKAP3 (ENSBBBG00000012227) #17	NDUFA9 (ENSBBBG00000002308) #18	GALNT8 (ENSBBBG00000012281) #19	KCNA6 (ENSBBBG00000002317)	KCNA1 (ENSBBBG00000002318) #20	KCNA5 (ENSBBBG00000001935) #22	NTF3 (ENSBBBG00000002324) #23	ENSBBBG00000007400	ANO2 (ENSBBBG00000012336) #24	VWF (ENSBBBG00000012369) #25	CD9 (ENSBBBG00000002367) #26	PLEKHG6 (ENSBBBG00000012442) #27	ENSBBBG00000012468 #28	SCNN1A (ENSBBBG00000012488) #29	LTBR (ENSBBBG00000002397) #30	CD27 (ENSBBBG00000009087) #31	ENSBBBG00000002403 #33	VAMP1 (ENSBBBG00000012550) #34	MRPL51 (ENSBBBG00000012567) #36	NCAPD2 (ENSBBBG00000012598) #37	GAPDH (ENSBBBG00000012745)
Bos	ANCESTRAL SPECIES	2	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00940000162821.g.b	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Bos_b	ANCESTRAL SPECIES	30	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000154384.h.a	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Hybrid Bos Indicus	MODERN SPECIES	24	PARP11 (ENSBIXG00005021947) #8	CCND2 (ENSBIXG00005021852) #10	TIGAR (ENSBIXG00005021786) #11	FGF23 (ENSBIXG00005006046) #12	FGF6 (ENSBIXG00005021741) #13	C12orf4 (ENSBIXG00005003656) #14	ENSBIXG00005021662	RAD51AP1 (ENSBIXG00005021625) #15	DYRK4 (ENSBIXG00005021586) #16	AKAP3 (ENSBIXG00005021488) #17	NDUFA9 (ENSBIXG00005021464) #18	GALNT8 (ENSBIXG00005003616) #19	KCNA6 (ENSBIXG00005021402)	KCNA1 (ENSBIXG00005021385) #20	ENSBIXG00005021361	KCNA5 (ENSBIXG00005021354) #22	NTF3 (ENSBIXG00005021338) #23	ANO2 (ENSBIXG00005021270) #24	ENSBIXG00005020908	VWF (ENSBIXG00005020874) #25	CD9 (ENSBIXG00005003523) #26	PLEKHG6 (ENSBIXG00005020777) #27	TNFRSF1A (ENSBIXG00005020704) #28	SCNN1A (ENSBIXG00005003494) #29	LTBR (ENSBIXG00005005674) #30	CD27 (ENSBIXG00005020535) #31	TAPBPL (ENSBIXG00005003468) #33	ENSBIXG00005003464 #34	MRPL51 (ENSBIXG00005006150) #36	NCAPD2 (ENSBIXG00005020400) #37	GAPDH (ENSBIXG00005020359)
Cow	MODERN SPECIES	24	CRACR2A (ENSBTAG00000018940) #7	PARP11 (ENSBTAG00000000275) #8	CCND2 (ENSBTAG00000016649) #10	TIGAR (ENSBTAG00000016650) #11	FGF23 (ENSBTAG00000030343) #12	FGF6 (ENSBTAG00000006800) #13	C5H12orf4 (ENSBTAG00000053303) #14	RAD51AP1 (ENSBTAG00000040065) #15	DYRK4 (ENSBTAG00000007556) #16	AKAP3 (ENSBTAG00000001020) #17	NDUFA9 (ENSBTAG00000005465) #18	GALNT8 (ENSBTAG00000017378) #19	KCNA6 (ENSBTAG00000047191)	KCNA1 (ENSBTAG00000016646) #20	ENSBTAG00000026522 #21	KCNA5 (ENSBTAG00000007553) #22	NTF3 (ENSBTAG00000010223) #23	ANO2 (ENSBTAG00000012246) #24	ENSBTAG00000011758	VWF (ENSBTAG00000012265) #25	CD9 (ENSBTAG00000014764) #26	PLEKHG6 (ENSBTAG00000004208) #27	TNFRSF1A (ENSBTAG00000004211) #28	SCNN1A (ENSBTAG00000002631) #29	LTBR (ENSBTAG00000015312) #30	CD27 (ENSBTAG00000014725) #31	TAPBPL (ENSBTAG00000014728) #33	VAMP1 (ENSBTAG00000014603) #34	MRPL51 (ENSBTAG00000014729) #36	NCAPD2 (ENSBTAG00000014730) #37	GAPDH (ENSBTAG00000014731)
Bos_a	ANCESTRAL SPECIES	24	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00940000162821.g.b	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Wild yak	MODERN SPECIES	949				CCND2 (ENSBMUG00000025969) #10	TIGAR (ENSBMUG00000025963) #11	FGF6 (ENSBMUG00000025961) #13	C12orf4 (ENSBMUG00000025957) #14	RAD51AP1 (ENSBMUG00000025952) #15	DYRK4 (ENSBMUG00000025946) #16	AKAP3 (ENSBMUG00000025941) #17	NDUFA9 (ENSBMUG00000025938) #18	GALNT8 (ENSBMUG00000025932) #19	ENSBMUG00000025928	KCNA1 (ENSBMUG00000025925) #20	ENSBMUG00000025921 #21	KCNA5 (ENSBMUG00000025917) #22	NTF3 (ENSBMUG00000025911) #23	ENSBMUG00000025908 #24
Siberian musk deer	MODERN SPECIES	1247	CRACR2A (ENSMMSG00000017289) #7	PARP11 (ENSMMSG00000017422) #8	ENSMMSG00000017478	CCND2 (ENSMMSG00000017496) #10	TIGAR (ENSMMSG00000017519) #11	FGF23 (ENSMMSG00000017548) #12	FGF6 (ENSMMSG00000017601) #13	C12orf4 (ENSMMSG00000017637) #14	RAD51AP1 (ENSMMSG00000017801) #15	DYRK4 (ENSMMSG00000017902) #16	AKAP3 (ENSMMSG00000018063) #17	NDUFA9 (ENSMMSG00000018097) #18	GALNT8 (ENSMMSG00000018133) #19	KCNA6 (ENSMMSG00000018173)	KCNA1 (ENSMMSG00000018186) #20	KCNA5 (ENSMMSG00000018200) #22	NTF3 (ENSMMSG00000018211) #23	ANO2 (ENSMMSG00000018256) #24	VWF (ENSMMSG00000018577) #25	CD9 (ENSMMSG00000018829) #26	PLEKHG6 (ENSMMSG00000018872) #27	TNFRSF1A (ENSMMSG00000018960) #28	SCNN1A (ENSMMSG00000019053) #29	LTBR (ENSMMSG00000019158) #30	CD27 (ENSMMSG00000019226) #31	TAPBPL (ENSMMSG00000019259) #33	VAMP1 (ENSMMSG00000019324) #34	ENSMMSG00000019365 #36	NCAPD2 (ENSMMSG00000019414) #37	ENSMMSG00000019587	IFFO1 (ENSMMSG00000019638)
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.j.a #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821.g #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000153313.C.b #17	ENSGT00390000006865.j.a #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821.g #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224.i #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000153313.C.b #17	ENSGT00390000006865.j.a #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821.g #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224.i #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000153313.C.b #17	ENSGT00390000006865.j.a #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821.g #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224.i #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000153313.C.b #17	ENSGT00390000006865.j.a #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821.g #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Beluga whale	MODERN SPECIES	23	TSPAN9 (ENSDLEG00000006579)	TSPAN11 (ENSDLEG00000006594)	PRMT8 (ENSDLEG00000006607)	CRACR2A (ENSDLEG00000006612) #7	PARP11 (ENSDLEG00000006618) #8	CCND2 (ENSDLEG00000006622) #10	ENSDLEG00000006634 #11	FGF23 (ENSDLEG00000006638) #12	FGF6 (ENSDLEG00000006643) #13	C12orf4 (ENSDLEG00000006645) #14	RAD51AP1 (ENSDLEG00000006666) #15	AKAP3 (ENSDLEG00000006676) #17	NDUFA9 (ENSDLEG00000006684) #18	KCNA6 (ENSDLEG00000006696)	KCNA1 (ENSDLEG00000006706) #20	KCNA5 (ENSDLEG00000006712) #22	NTF3 (ENSDLEG00000006715) #23	ANO2 (ENSDLEG00000006729) #24	ENSDLEG00000006754 #24	VWF (ENSDLEG00000007022) #25	CD9 (ENSDLEG00000014732) #26	PLEKHG6 (ENSDLEG00000014777) #27	TNFRSF1A (ENSDLEG00000014826) #28	SCNN1A (ENSDLEG00000014848) #29	LTBR (ENSDLEG00000014872) #30	CD27 (ENSDLEG00000014916) #31	TAPBPL (ENSDLEG00000014928) #33	VAMP1 (ENSDLEG00000014958) #34	MRPL51 (ENSDLEG00000014972) #36	NCAPD2 (ENSDLEG00000014985) #37	GAPDH (ENSDLEG00000015049)
Narwhal	MODERN SPECIES	313	TSPAN9 (ENSMMNG00015014066)	TSPAN11 (ENSMMNG00015014077)	PRMT8 (ENSMMNG00015014095)	CRACR2A (ENSMMNG00015014118) #7	PARP11 (ENSMMNG00015014144) #8	CCND2 (ENSMMNG00015014159) #10	TIGAR (ENSMMNG00015014166) #11	FGF23 (ENSMMNG00015014172) #12	FGF6 (ENSMMNG00015014179) #13	C12orf4 (ENSMMNG00015014191) #14	RAD51AP1 (ENSMMNG00015014201) #15	AKAP3 (ENSMMNG00015014212) #17	ENSMMNG00015014224 #18	KCNA6 (ENSMMNG00015014245)	KCNA1 (ENSMMNG00015014253) #20	KCNA5 (ENSMMNG00015014257) #22	NTF3 (ENSMMNG00015014262) #23	ANO2 (ENSMMNG00015014305) #24	VWF (ENSMMNG00015014423) #25	CD9 (ENSMMNG00015014479) #26	PLEKHG6 (ENSMMNG00015014516) #27	TNFRSF1A (ENSMMNG00015014562) #28	SCNN1A (ENSMMNG00015014598) #29	LTBR (ENSMMNG00015014642) #30	CD27 (ENSMMNG00015014673) #31	TAPBPL (ENSMMNG00015014697) #33	VAMP1 (ENSMMNG00015014734) #34	MRPL51 (ENSMMNG00015014780) #36	NCAPD2 (ENSMMNG00015014856) #37	GAPDH (ENSMMNG00015014916)	IFFO1 (ENSMMNG00015014957)
Vaquita	MODERN SPECIES	1	TSPAN9 (ENSPSNG00000009791)	TSPAN11 (ENSPSNG00000009653)	PRMT8 (ENSPSNG00000009534)	CRACR2A (ENSPSNG00000009361) #7	PARP11 (ENSPSNG00000009267) #8	CCND2 (ENSPSNG00000009209) #10	ENSPSNG00000009141 #11	FGF23 (ENSPSNG00000009110) #12	FGF6 (ENSPSNG00000009075) #13	C12orf4 (ENSPSNG00000009042) #14	RAD51AP1 (ENSPSNG00000008995) #15	AKAP3 (ENSPSNG00000008957) #17	NDUFA9 (ENSPSNG00000008916) #18	KCNA6 (ENSPSNG00000008891)	KCNA1 (ENSPSNG00000008879) #20	KCNA5 (ENSPSNG00000008856) #22	NTF3 (ENSPSNG00000008822) #23	ANO2 (ENSPSNG00000008259) #24	VWF (ENSPSNG00000007898) #25	CD9 (ENSPSNG00000007840) #26	PLEKHG6 (ENSPSNG00000007509) #27	TNFRSF1A (ENSPSNG00000007444) #28	SCNN1A (ENSPSNG00000007201) #29	LTBR (ENSPSNG00000007107) #30	CD27 (ENSPSNG00000007050) #31	TAPBPL (ENSPSNG00000007018) #33	VAMP1 (ENSPSNG00000006961) #34	MRPL51 (ENSPSNG00000006911) #36	NCAPD2 (ENSPSNG00000006782) #37	GAPDH (ENSPSNG00000006718)	IFFO1 (ENSPSNG00000006501)
Sperm whale	MODERN SPECIES	17	ENSPCTG00005011067	TULP3 (ENSPCTG00005011376)	TEAD4 (ENSPCTG00005011417)	PRMT8 (ENSPCTG00005011517)	CRACR2A (ENSPCTG00005011683) #7	PARP11 (ENSPCTG00005011729) #8	CCND2 (ENSPCTG00005011849) #10	TIGAR (ENSPCTG00005011882) #11	FGF23 (ENSPCTG00005011926) #12	FGF6 (ENSPCTG00005011990) #13	C6H12orf4 (ENSPCTG00005012051) #14	RAD51AP1 (ENSPCTG00005012136) #15	NDUFA9 (ENSPCTG00005012195) #18	KCNA6 (ENSPCTG00005012281)	KCNA1 (ENSPCTG00005012321) #20	KCNA5 (ENSPCTG00005012339) #22	NTF3 (ENSPCTG00005012372) #23	ENSPCTG00005012412 #24	ENSPCTG00005012448 #24	VWF (ENSPCTG00005012525) #25	PLEKHG6 (ENSPCTG00005013051) #27	TNFRSF1A (ENSPCTG00005013722) #28	SCNN1A (ENSPCTG00005013833) #29	LTBR (ENSPCTG00005014333) #30	NCAPD2 (ENSPCTG00005014482) #37	ENSPCTG00005014843	LAG3 (ENSPCTG00005014925)	PTMS (ENSPCTG00005015089)	MLF2 (ENSPCTG00005015185)	COPS7A (ENSPCTG00005015239)	PIANP (ENSPCTG00005015306)
Blue whale	MODERN SPECIES	1	TSPAN11 (ENSBMSG00010022460)	PRMT8 (ENSBMSG00010022462)	CRACR2A (ENSBMSG00010022465) #7	PARP11 (ENSBMSG00010022471) #8	CCND2 (ENSBMSG00010022473) #10	TIGAR (ENSBMSG00010022474) #11	FGF23 (ENSBMSG00010022476) #12	FGF6 (ENSBMSG00010022477) #13	C12orf4 (ENSBMSG00010022478) #14	RAD51AP1 (ENSBMSG00010022480) #15	DYRK4 (ENSBMSG00010022481) #16	AKAP3 (ENSBMSG00010022485) #17	NDUFA9 (ENSBMSG00010022488) #18	KCNA6 (ENSBMSG00010022492)	KCNA1 (ENSBMSG00010022494) #20	KCNA5 (ENSBMSG00010012135) #22	NTF3 (ENSBMSG00010012141) #23	ANO2 (ENSBMSG00010012182) #24	VWF (ENSBMSG00010012312) #25	CD9 (ENSBMSG00010012380) #26	PLEKHG6 (ENSBMSG00010012458) #27	TNFRSF1A (ENSBMSG00010012591) #28	SCNN1A (ENSBMSG00010012651) #29	LTBR (ENSBMSG00010012695) #30	CD27 (ENSBMSG00010012719) #31	TAPBPL (ENSBMSG00010012737) #33	VAMP1 (ENSBMSG00010012768) #34	ENSBMSG00010012842 #36	GAPDH (ENSBMSG00010012883)	IFFO1 (ENSBMSG00010012925)	ENSBMSG00010013081
Camelidae	ANCESTRAL SPECIES	17	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Arabian camel	MODERN SPECIES	27	CRACR2A (ENSCDRG00005022420) #7	PARP11 (ENSCDRG00005022421) #8	ENSCDRG00005022422 #10	ENSCDRG00005022423	ENSCDRG00005022424 #10	TIGAR (ENSCDRG00005022425) #11	FGF23 (ENSCDRG00005022426) #12	FGF6 (ENSCDRG00005022428) #13	C12orf4 (ENSCDRG00005022429) #14	RAD51AP1 (ENSCDRG00005022432) #15	DYRK4 (ENSCDRG00005022435) #16	AKAP3 (ENSCDRG00005022442) #17	NDUFA9 (ENSCDRG00005008959) #18	KCNA6 (ENSCDRG00005009064)	KCNA1 (ENSCDRG00005009085) #20	KCNA5 (ENSCDRG00005009093) #22	NTF3 (ENSCDRG00005009117) #23	ANO2 (ENSCDRG00005009195) #24	VWF (ENSCDRG00005009803) #25	CD9 (ENSCDRG00005010377) #26	PLEKHG6 (ENSCDRG00005010653) #27	TNFRSF1A (ENSCDRG00005010816) #28	SCNN1A (ENSCDRG00005010881) #29	ENSCDRG00005011011 #30	ENSCDRG00005011060 #30	ENSCDRG00005011099 #31	TAPBPL (ENSCDRG00005011181) #33	VAMP1 (ENSCDRG00005011313) #34	MRPL51 (ENSCDRG00005011359) #36	NCAPD2 (ENSCDRG00005011412) #37	GAPDH (ENSCDRG00005011757)
Suina	ANCESTRAL SPECIES	4	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Pig	MODERN SPECIES	13	PRMT8 (ENSSSCG00000000730)	CRACR2A (ENSSSCG00000000732) #7	PARP11 (ENSSSCG00000000728) #8	CCND2 (ENSSSCG00000038694) #10	TIGAR (ENSSSCG00000024219) #11	FGF23 (ENSSSCG00000052449) #12	FGF6 (ENSSSCG00000032662) #13	C12orf4 (ENSSSCG00000000723) #14	RAD51AP1 (ENSSSCG00000000722) #15	DYRK4 (ENSSSCG00000000721) #16	AKAP3 (ENSSSCG00000000720) #17	NDUFA9 (ENSSSCG00000000719) #18	GALNT8 (ENSSSCG00000000718) #19	KCNA6 (ENSSSCG00000060060)	KCNA1 (ENSSSCG00000000716) #20	KCNA5 (ENSSSCG00000056277) #22	NTF3 (ENSSSCG00000033544) #23	VWF (ENSSSCG00000000712) #25	CD9 (ENSSSCG00000022230) #26	PLEKHG6 (ENSSSCG00000000709) #27	TNFRSF1A (ENSSSCG00000000708) #28	SCNN1A (ENSSSCG00000000707) #29	LTBR (ENSSSCG00000000706) #30	CD27 (ENSSSCG00000063084) #31	TAPBPL (ENSSSCG00000000704) #33	ENSSSCG00000000703 #34	MRPL51 (ENSSSCG00000039662) #36	NCAPD2 (ENSSSCG00000000693) #37	GAPDH (ENSSSCG00000000694)	IFFO1 (ENSSSCG00000000695)	NOP2 (ENSSSCG00000000696)
Chacoan peccary	MODERN SPECIES	901	PRMT8 (ENSCWAG00000016914)	CRACR2A (ENSCWAG00000017028) #7	PARP11 (ENSCWAG00000017185) #8	CCND2 (ENSCWAG00000017248) #10	TIGAR (ENSCWAG00000017272) #11	FGF23 (ENSCWAG00000017309) #12	FGF6 (ENSCWAG00000017354) #13	C12orf4 (ENSCWAG00000017380) #14	RAD51AP1 (ENSCWAG00000017476) #15	DYRK4 (ENSCWAG00000017580) #16	AKAP3 (ENSCWAG00000017747) #17	NDUFA9 (ENSCWAG00000017827) #18	GALNT8 (ENSCWAG00000017864) #19	KCNA6 (ENSCWAG00000017933)	KCNA1 (ENSCWAG00000017957) #20	KCNA5 (ENSCWAG00000017966) #22	NTF3 (ENSCWAG00000018000) #23	ANO2 (ENSCWAG00000018045) #24	VWF (ENSCWAG00000018464) #25	CD9 (ENSCWAG00000018715) #26	PLEKHG6 (ENSCWAG00000018796) #27	TNFRSF1A (ENSCWAG00000019019) #28	SCNN1A (ENSCWAG00000019063) #29	LTBR (ENSCWAG00000019319) #30	CD27 (ENSCWAG00000019371) #31	TAPBPL (ENSCWAG00000019420) #33	VAMP1 (ENSCWAG00000019488) #34	MRPL51 (ENSCWAG00000019574) #36	NCAPD2 (ENSCWAG00000019604) #37	GAPDH (ENSCWAG00000019631)	IFFO1 (ENSCWAG00000019666)
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Caniformia	ANCESTRAL SPECIES	19	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.l
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.l #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.l
Ursidae	ANCESTRAL SPECIES	25	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.l #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b.j #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.l	ENSGT00510000046803.b.b
Ursus	ANCESTRAL SPECIES	103													ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b.j #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.k.b	ENSGT00940000161554
American black bear	MODERN SPECIES	4919																KCNA5 (ENSUAMG00000018782) #22
Polar bear	MODERN SPECIES	484													GALNT8 (ENSUMAG00000007766) #19	ENSUMAG00000007755	KCNA1 (ENSUMAG00000007743) #20	KCNA5 (ENSUMAG00000007733) #22	NTF3 (ENSUMAG00000007725) #23	ANO2 (ENSUMAG00000007545) #24	VWF (ENSUMAG00000007512) #25	CD9 (ENSUMAG00000007507) #26	PLEKHG6 (ENSUMAG00000007501) #27	ENSUMAG00000007495 #28	SCNN1A (ENSUMAG00000007429) #29	LTBR (ENSUMAG00000007402) #30	CD27 (ENSUMAG00000007399) #31	TAPBPL (ENSUMAG00000007397) #33	ENSUMAG00000007395 #34	MRPL51 (ENSUMAG00000007393) #36	NCAPD2 (ENSUMAG00000007255) #37	GAPDH (ENSUMAG00000007239)	NOP2 (ENSUMAG00000007220)
Giant Panda	MODERN SPECIES	7	ENSAMEG00000005002	PRMT8 (ENSAMEG00000005022)	CRACR2A (ENSAMEG00000005041) #7	PARP11 (ENSAMEG00000015735) #8	CCND2 (ENSAMEG00000015727) #10	TIGAR (ENSAMEG00000026993) #11	FGF23 (ENSAMEG00000015720) #12	FGF6 (ENSAMEG00000015714) #13	C12orf4 (ENSAMEG00000015692) #14	DYRK4 (ENSAMEG00000015666) #16	AKAP3 (ENSAMEG00000015661) #17	NDUFA9 (ENSAMEG00000015628) #18	GALNT8 (ENSAMEG00000015624) #19	KCNA6 (ENSAMEG00000020279)	KCNA1 (ENSAMEG00000020278) #20	KCNA5 (ENSAMEG00000020277) #22	NTF3 (ENSAMEG00000019233) #23	ANO2 (ENSAMEG00000011274) #24	VWF (ENSAMEG00000011272) #25	ENSAMEG00000006889	CD9 (ENSAMEG00000014604) #26	ENSAMEG00000014597 #27	TNFRSF1A (ENSAMEG00000014569) #28	SCNN1A (ENSAMEG00000014498) #29	LTBR (ENSAMEG00000014476) #30	CD27 (ENSAMEG00000014466) #31	TAPBPL (ENSAMEG00000014448) #33	VAMP1 (ENSAMEG00000014438) #34	MRPL51 (ENSAMEG00000014426) #36	NCAPD2 (ENSAMEG00000014358) #37	GAPDH (ENSAMEG00000014329)
Mustelinae	ANCESTRAL SPECIES	229													ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22
Ferret	MODERN SPECIES	559													ENSMPUG00000010696 #19	KCNA6 (ENSMPUG00000019148)	KCNA1 (ENSMPUG00000019152) #20	KCNA5 (ENSMPUG00000019154) #22
American mink	MODERN SPECIES	505													GALNT8 (ENSNVIG00000021152) #19	KCNA6 (ENSNVIG00000021147)	KCNA1 (ENSNVIG00000021135) #20	KCNA5 (ENSNVIG00000021123) #22
Canidae	ANCESTRAL SPECIES	8	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.l.h.a	ENSGT00510000046803.b.b
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.l.h.a	ENSGT00510000046803.b.b
Dingo	MODERN SPECIES	74	ENSCAFG00020014857	ENSCAFG00020014860	ENSCAFG00020014862	CCND2 (ENSCAFG00020014864) #10	TIGAR (ENSCAFG00020014867) #11	FGF23 (ENSCAFG00020014869) #12	FGF6 (ENSCAFG00020014871) #13	C12orf4 (ENSCAFG00020014875) #14	RAD51AP1 (ENSCAFG00020014879) #15	DYRK4 (ENSCAFG00020014885) #16	AKAP3 (ENSCAFG00020014891) #17	NDUFA9 (ENSCAFG00020014892) #18	GALNT8 (ENSCAFG00020014895) #19	ENSCAFG00020014903	KCNA1 (ENSCAFG00020014905) #20	KCNA5 (ENSCAFG00020014907) #22	NTF3 (ENSCAFG00020014909) #23	ANO2 (ENSCAFG00020014915) #24	ENSCAFG00020014945 #24	VWF (ENSCAFG00020014972) #25	CD9 (ENSCAFG00020015582) #26	PLEKHG6 (ENSCAFG00020015584) #27	ENSCAFG00020015587 #28	ENSCAFG00020015591 #29	ENSCAFG00020015631 #30
Dog	MODERN SPECIES	19	PARP11 (ENSCAFG00845030710) #8	ENSCAFG00845030696	TMA7 (ENSCAFG00845030690)	CCND2 (ENSCAFG00845030681) #10	TIGAR (ENSCAFG00845030667) #11	FGF23 (ENSCAFG00845030660) #12	FGF6 (ENSCAFG00845030655) #13	C12orf4 (ENSCAFG00845030643) #14	RAD51AP1 (ENSCAFG00845030625) #15	DYRK4 (ENSCAFG00845030589) #16	AKAP3 (ENSCAFG00845030567) #17	NDUFA9 (ENSCAFG00845030540) #18	GALNT8 (ENSCAFG00845030470) #19	KCNA6 (ENSCAFG00845030426)	KCNA1 (ENSCAFG00845030371) #20	KCNA5 (ENSCAFG00845030339) #22	NTF3 (ENSCAFG00845030324) #23	ANO2 (ENSCAFG00845030210) #24	VWF (ENSCAFG00845029798) #25	CD9 (ENSCAFG00845029613) #26	PLEKHG6 (ENSCAFG00845029568) #27	ENSCAFG00845029433 #28	SCNN1A (ENSCAFG00845029331) #29	LTBR (ENSCAFG00845029256) #30	CD27 (ENSCAFG00845029234) #31	TAPBPL (ENSCAFG00845029155) #33	VAMP1 (ENSCAFG00845029081) #34	MRPL51 (ENSCAFG00845029018) #36	NCAPD2 (ENSCAFG00845028959) #37	GAPDH (ENSCAFG00845028918)	IFFO1 (ENSCAFG00845028853)
Red fox	MODERN SPECIES	18	ENSVVUG00000018073	ENSVVUG00000018069	CCND2 (ENSVVUG00000018066) #10	TIGAR (ENSVVUG00000018064) #11	FGF23 (ENSVVUG00000018055) #12	ENSVVUG00000018050	FGF6 (ENSVVUG00000018045) #13	CUNH12orf4 (ENSVVUG00000017757) #14	RAD51AP1 (ENSVVUG00000017747) #15	DYRK4 (ENSVVUG00000017733) #16	AKAP3 (ENSVVUG00000017731) #17	NDUFA9 (ENSVVUG00000017729) #18	GALNT8 (ENSVVUG00000017727) #19	KCNA6 (ENSVVUG00000017725)	KCNA1 (ENSVVUG00000017723) #20	KCNA5 (ENSVVUG00000017719) #22	ENSVVUG00000017715	NTF3 (ENSVVUG00000017711) #23	ANO2 (ENSVVUG00000017708) #24	VWF (ENSVVUG00000012603) #25	CD9 (ENSVVUG00000012181) #26	PLEKHG6 (ENSVVUG00000012077) #27	ENSVVUG00000012070 #28	SCNN1A (ENSVVUG00000012062) #29	LTBR (ENSVVUG00000012052) #30	CD27 (ENSVVUG00000012048) #31	TAPBPL (ENSVVUG00000012035) #33	ENSVVUG00000012024 #34	MRPL51 (ENSVVUG00000012022) #36	NCAPD2 (ENSVVUG00000011972) #37	IFFO1 (ENSVVUG00000011850)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.s #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Panthera	ANCESTRAL SPECIES		ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.s.b #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.s.b #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
leopard	MODERN SPECIES	45	PRMT8 (ENSPPRG00000004523)	CRACR2A (ENSPPRG00000006970) #7	PARP11 (ENSPPRG00000007746) #8	CCND2 (ENSPPRG00000008010) #10	TIGAR (ENSPPRG00000008469) #11	FGF23 (ENSPPRG00000008714) #12	FGF6 (ENSPPRG00000008942) #13	C12orf4 (ENSPPRG00000009328) #14	ENSPPRG00000010551 #15	DYRK4 (ENSPPRG00000013215) #16	AKAP3 (ENSPPRG00000013341) #17	NDUFA9 (ENSPPRG00000013671) #18	ENSPPRG00000017490	ENSPPRG00000017509	KCNA1 (ENSPPRG00000017526) #20	KCNA5 (ENSPPRG00000017539) #22	NTF3 (ENSPPRG00000019625) #23	ANO2 (ENSPPRG00000001953) #24	VWF (ENSPPRG00000004677) #25	CD9 (ENSPPRG00000005804) #26	PLEKHG6 (ENSPPRG00000008925) #27	TNFRSF1A (ENSPPRG00000009962) #28	SCNN1A (ENSPPRG00000012858) #29	LTBR (ENSPPRG00000016051) #30	CD27 (ENSPPRG00000020532) #31	ENSPPRG00000022113 #32	TAPBPL (ENSPPRG00000022848) #33	VAMP1 (ENSPPRG00000000234) #34	MRPL51 (ENSPPRG00000000742) #36	NCAPD2 (ENSPPRG00000001126) #37	ENSPPRG00000005020
lion	MODERN SPECIES	7	TSPAN11 (ENSPLOG00000013083)	PRMT8 (ENSPLOG00000013219)	CRACR2A (ENSPLOG00000013385) #7	PARP11 (ENSPLOG00000013437) #8	CCND2 (ENSPLOG00000013525) #10	TIGAR (ENSPLOG00000013560) #11	FGF23 (ENSPLOG00000013586) #12	FGF6 (ENSPLOG00000013626) #13	C12orf4 (ENSPLOG00000013670) #14	ENSPLOG00000013739 #15	DYRK4 (ENSPLOG00000014073) #16	AKAP3 (ENSPLOG00000014287) #17	NDUFA9 (ENSPLOG00000014343) #18	KCNA6 (ENSPLOG00000014382)	KCNA1 (ENSPLOG00000014395) #20	KCNA5 (ENSPLOG00000014421) #22	NTF3 (ENSPLOG00000014447) #23	ANO2 (ENSPLOG00000014508) #24	VWF (ENSPLOG00000015265) #25	CD9 (ENSPLOG00000015832) #26	PLEKHG6 (ENSPLOG00000000617) #27	TNFRSF1A (ENSPLOG00000000829) #28	SCNN1A (ENSPLOG00000000874) #29	LTBR (ENSPLOG00000000954) #30	CD27 (ENSPLOG00000001037) #31	TAPBPL (ENSPLOG00000001078) #33	VAMP1 (ENSPLOG00000001138) #34	MRPL51 (ENSPLOG00000001173) #36	NCAPD2 (ENSPLOG00000001201) #37	GAPDH (ENSPLOG00000001339)	IFFO1 (ENSPLOG00000001507)
Tiger	MODERN SPECIES	306	TSPAN9 (ENSPTIG00000019207)	TSPAN11 (ENSPTIG00000018915)	PRMT8 (ENSPTIG00000017539)	CRACR2A (ENSPTIG00000014956) #7	PARP11 (ENSPTIG00000012833) #8	CCND2 (ENSPTIG00000012302) #10	TIGAR (ENSPTIG00000011654) #11	FGF23 (ENSPTIG00000010755) #12	FGF6 (ENSPTIG00000009760) #13	C12orf4 (ENSPTIG00000008734) #14	ENSPTIG00000001319 #15	DYRK4 (ENSPTIG00000018320) #16	AKAP3 (ENSPTIG00000017772) #17	NDUFA9 (ENSPTIG00000017385) #18	KCNA1 (ENSPTIG00000007140) #20	KCNA5 (ENSPTIG00000007139) #22	NTF3 (ENSPTIG00000013497) #23	ANO2 (ENSPTIG00000021152) #24	VWF (ENSPTIG00000017098) #25	CD9 (ENSPTIG00000015011) #26	PLEKHG6 (ENSPTIG00000010482) #27	ENSPTIG00000009056 #28	SCNN1A (ENSPTIG00000005994) #29	LTBR (ENSPTIG00000005394) #30	ENSPTIG00000006690	CD27 (ENSPTIG00000004351) #31	TAPBPL (ENSPTIG00000019354) #33	ENSPTIG00000018791 #32	VAMP1 (ENSPTIG00000018179) #34	MRPL51 (ENSPTIG00000016877) #36	NCAPD2 (ENSPTIG00000015885) #37
Cat	MODERN SPECIES	238	PRMT8 (ENSFCAG00000015736)	CRACR2A (ENSFCAG00000015741) #7	PARP11 (ENSFCAG00000025433) #8	CCND2 (ENSFCAG00000046690) #10	TIGAR (ENSFCAG00000045960) #11	FGF23 (ENSFCAG00000045399) #12	FGF6 (ENSFCAG00000000142) #13	CB4H12orf4 (ENSFCAG00000000143) #14	ENSFCAG00000039211 #15	DYRK4 (ENSFCAG00000022967) #16	AKAP3 (ENSFCAG00000029824) #17	NDUFA9 (ENSFCAG00000005951) #18	GALNT8 (ENSFCAG00000005953) #19	KCNA6 (ENSFCAG00000002340)	KCNA1 (ENSFCAG00000005956) #20	KCNA5 (ENSFCAG00000009372) #22	NTF3 (ENSFCAG00000006859) #23	ANO2 (ENSFCAG00000006860) #24	ENSFCAG00000034293	VWF (ENSFCAG00000006861) #25	CD9 (ENSFCAG00000034944) #26	PLEKHG6 (ENSFCAG00000006865) #27	TNFRSF1A (ENSFCAG00000006868) #28	SCNN1A (ENSFCAG00000006869) #29	LTBR (ENSFCAG00000008592) #30	CD27 (ENSFCAG00000006870) #31	TAPBPL (ENSFCAG00000006871) #33	VAMP1 (ENSFCAG00000036228) #34	MRPL51 (ENSFCAG00000043270) #36	NCAPD2 (ENSFCAG00000006873) #37	GAPDH (ENSFCAG00000006874)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q
Chiroptera	ANCESTRAL SPECIES	4																ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000162970	ENSGT00940000155834	ENSGT00940000157129	ENSGT00940000156375	ENSGT00390000009047.b	ENSGT00390000008645	ENSGT00940000153110.B	ENSGT00940000154818.a.a	ENSGT00940000156615	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334	ENSGT00940000158165	ENSGT00390000005848	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q	ENSGT00510000046803.b.b
Greater horseshoe bat	MODERN SPECIES	1	CDK17 (ENSRFEG00010019452)	ELK3 (ENSRFEG00010019517)	LTA4H (ENSRFEG00010019582)	HAL (ENSRFEG00010019753)	AMDHD1 (ENSRFEG00010019814)	CCDC38 (ENSRFEG00010019857)	SNRPF (ENSRFEG00010019886)	NTN4 (ENSRFEG00010019959)	USP44 (ENSRFEG00010020037)	METAP2 (ENSRFEG00010000487)	VEZT (ENSRFEG00010000650)	ENSRFEG00010000705	FGD6 (ENSRFEG00010000721)	NR2C1 (ENSRFEG00010000764)	NDUFA12 (ENSRFEG00010000814)	KCNA5 (ENSRFEG00010000848) #22	NTF3 (ENSRFEG00010000870) #23	ANO2 (ENSRFEG00010000920) #24	VWF (ENSRFEG00010001025) #25	CD9 (ENSRFEG00010001199) #26	PLEKHG6 (ENSRFEG00010001287) #27	TNFRSF1A (ENSRFEG00010001395) #28	SCNN1A (ENSRFEG00010001487) #29	VAMP1 (ENSRFEG00010001570) #34	LTBR (ENSRFEG00010001600) #30	CD27 (ENSRFEG00010001691) #31	TAPBPL (ENSRFEG00010001724) #33	MRPL51 (ENSRFEG00010001755) #36	NCAPD2 (ENSRFEG00010001784) #37	ENSRFEG00010001850	IFFO1 (ENSRFEG00010001885)
Microbat	MODERN SPECIES	947	ENSMLUG00000024585	ELK3 (ENSMLUG00000002400)	LTA4H (ENSMLUG00000013624)	HAL (ENSMLUG00000013605)	AMDHD1 (ENSMLUG00000013596)	CCDC38 (ENSMLUG00000013584)	ENSMLUG00000013577	NTN4 (ENSMLUG00000000874)	USP44 (ENSMLUG00000006043)	METAP2 (ENSMLUG00000006036)	ENSMLUG00000030570	VEZT (ENSMLUG00000015852)	FGD6 (ENSMLUG00000015828)	NR2C1 (ENSMLUG00000015807)	NDUFA12 (ENSMLUG00000027131)	KCNA5 (ENSMLUG00000015804) #22	NTF3 (ENSMLUG00000012482) #23	ANO2 (ENSMLUG00000015973) #24	VWF (ENSMLUG00000015993) #25	CD9 (ENSMLUG00000006901) #26	PLEKHG6 (ENSMLUG00000014270) #27	TNFRSF1A (ENSMLUG00000014278) #28	SCNN1A (ENSMLUG00000014284) #29	LTBR (ENSMLUG00000014294) #30	CD27 (ENSMLUG00000014298) #31	TAPBPL (ENSMLUG00000014300) #33	VAMP1 (ENSMLUG00000014307) #34	NCAPD2 (ENSMLUG00000014309) #37	ENSMLUG00000014320	IFFO1 (ENSMLUG00000014327)	NOP2 (ENSMLUG00000014333)
Megabat	MODERN SPECIES	464																KCNA5 (ENSPVAG00000004081) #22
Equus	ANCESTRAL SPECIES	28	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.q.g.b
Donkey	MODERN SPECIES	14	ENSEASG00005032781	PRMT8 (ENSEASG00005017101)	CRACR2A (ENSEASG00005017095) #7	PARP11 (ENSEASG00005017087) #8	CCND2 (ENSEASG00005017079) #10	TIGAR (ENSEASG00005029219) #11	FGF23 (ENSEASG00005017073) #12	FGF6 (ENSEASG00005017066) #13	C12orf4 (ENSEASG00005017056) #14	DYRK4 (ENSEASG00005017036) #16	AKAP3 (ENSEASG00005017030) #17	NDUFA9 (ENSEASG00005017027) #18	GALNT8 (ENSEASG00005017020) #19	KCNA6 (ENSEASG00005029600)	KCNA1 (ENSEASG00005033647) #20	KCNA5 (ENSEASG00005038261) #22	NTF3 (ENSEASG00005016993) #23	ANO2 (ENSEASG00005016961) #24	VWF (ENSEASG00005016355) #25	CD9 (ENSEASG00005016182) #26	PLEKHG6 (ENSEASG00005016179) #27	TNFRSF1A (ENSEASG00005016176) #28	SCNN1A (ENSEASG00005016173) #29	LTBR (ENSEASG00005016171) #30	VAMP1 (ENSEASG00005037737) #34	ENSEASG00005036568 #31	TAPBPL (ENSEASG00005016162) #33	ENSEASG00005035678 #32	MRPL51 (ENSEASG00005035991) #36	NCAPD2 (ENSEASG00005016158) #37	ENSEASG00005016156
Horse	MODERN SPECIES	27	PRMT8 (ENSECAG00000014331)	CRACR2A (ENSECAG00000034127) #7	PARP11 (ENSECAG00000006287) #8	CCND2 (ENSECAG00000012663) #10	TIGAR (ENSECAG00000019133) #11	FGF23 (ENSECAG00000021077) #12	FGF6 (ENSECAG00000022017) #13	C6H12orf4 (ENSECAG00000022082) #14	RAD51AP1 (ENSECAG00000010367) #15	ENSECAG00000053072	NDUFA9 (ENSECAG00000016601) #16	AKAP3 (ENSECAG00000015248) #17	NDUFA9 (ENSECAG00000049440) #18	GALNT8 (ENSECAG00000024083) #19	KCNA6 (ENSECAG00000002941)	KCNA5 (ENSECAG00000003033) #22	ENSECAG00000028778	NTF3 (ENSECAG00000024611) #23	ANO2 (ENSECAG00000024617) #24	VWF (ENSECAG00000010778) #25	CD9 (ENSECAG00000003002) #26	PLEKHG6 (ENSECAG00000012373) #27	TNFRSF1A (ENSECAG00000016330) #28	SCNN1A (ENSECAG00000001443) #29	LTBR (ENSECAG00000000458) #30	VAMP1 (ENSECAG00000014602) #34	CD27 (ENSECAG00000011126) #31	TAPBPL (ENSECAG00000012920) #33	ENSECAG00000040327 #32	NCAPD2 (ENSECAG00000017796) #37	GAPDH (ENSECAG00000022051)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Hedgehog	MODERN SPECIES	2729																ENSEEUG00000005548 #22
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n
Primates	ANCESTRAL SPECIES	6	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.a
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.b	ENSGT00510000046803.b.b
Lemuriformes	ANCESTRAL SPECIES	41	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.b.f.b	ENSGT00510000046803.b.b
Lemuriformes_a	ANCESTRAL SPECIES	33	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.b.f.b	ENSGT00510000046803.b.b
Greater bamboo lemur	MODERN SPECIES	21													GALNT8 (ENSPSMG00000008455) #19	KCNA6 (ENSPSMG00000008457)	KCNA1 (ENSPSMG00000008462) #20	KCNA5 (ENSPSMG00000008467) #22
Bushbaby	MODERN SPECIES	219	CRACR2A (ENSOGAG00000001502) #7	ENSOGAG00000030081	PARP11 (ENSOGAG00000008251) #8	CCND2 (ENSOGAG00000005208) #10	ENSOGAG00000005209 #11	FGF23 (ENSOGAG00000005211) #12	FGF6 (ENSOGAG00000005214) #13	C12orf4 (ENSOGAG00000005216) #14	RAD51AP1 (ENSOGAG00000005220) #15	DYRK4 (ENSOGAG00000005221) #16	AKAP3 (ENSOGAG00000005223) #17	NDUFA9 (ENSOGAG00000005225) #18	GALNT8 (ENSOGAG00000005227) #19	KCNA6 (ENSOGAG00000005228)	KCNA1 (ENSOGAG00000005312) #20	KCNA5 (ENSOGAG00000029508) #22	NTF3 (ENSOGAG00000009496) #23	ANO2 (ENSOGAG00000005943) #24	VWF (ENSOGAG00000005948) #25	ENSOGAG00000009557 #26	PLEKHG6 (ENSOGAG00000012066) #27	TNFRSF1A (ENSOGAG00000012073) #28	SCNN1A (ENSOGAG00000012078) #29	LTBR (ENSOGAG00000025739) #30	CD27 (ENSOGAG00000012085) #31	TAPBPL (ENSOGAG00000012086) #33	VAMP1 (ENSOGAG00000012088) #34	MRPL51 (ENSOGAG00000031255) #36	NCAPD2 (ENSOGAG00000010019) #37	IFFO1 (ENSOGAG00000010024)	ENSOGAG00000010028
Haplorrhini	ANCESTRAL SPECIES	39	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.a
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.a
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Cercopithecinae_a	ANCESTRAL SPECIES	25	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00910000147930	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Macaca	ANCESTRAL SPECIES	30	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00910000147930	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.b.a.a.b.b.c	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n.a.a.a.a.a.a	ENSGT00510000046803.b.b	ENSGT00940000161554
Rhesus	MODERN SPECIES	2	CRACR2A (ENSMMUG00000023583) #7	PARP11 (ENSMMUG00000018273) #8	TIGAR (ENSMMUG00000008546) #11	FGF23 (ENSMMUG00000064833) #12	ENSMMUG00000059529	FGF6 (ENSMMUG00000053967) #13	ENSMMUG00000052270	C11H12orf4 (ENSMMUG00000015188) #14	RAD51AP1 (ENSMMUG00000015189) #15	DYRK4 (ENSMMUG00000020811) #16	AKAP3 (ENSMMUG00000020812) #17	NDUFA9 (ENSMMUG00000020813) #19	KCNA6 (ENSMMUG00000063966)	KCNA1 (ENSMMUG00000053174) #20	ENSMMUG00000063847	KCNA5 (ENSMMUG00000022887) #22	ENSMMUG00000056181	NTF3 (ENSMMUG00000014646) #23	VWF (ENSMMUG00000022893) #25	ENSMMUG00000061974	CD9 (ENSMMUG00000004470) #26	PLEKHG6 (ENSMMUG00000000375) #27	TNFRSF1A (ENSMMUG00000000377) #28	SCNN1A (ENSMMUG00000020212) #29	LTBR (ENSMMUG00000020213) #30	ENSMMUG00000053013	TAPBPL (ENSMMUG00000014265) #33	VAMP1 (ENSMMUG00000053354) #34	MRPL51 (ENSMMUG00000018676) #36	NCAPD2 (ENSMMUG00000018677) #37	GAPDH (ENSMMUG00000018679)
Pig-tailed macaque	MODERN SPECIES	593	CCND2 (ENSMNEG00000031519) #10	ENSMNEG00000008351	TIGAR (ENSMNEG00000028202) #11	FGF23 (ENSMNEG00000027208) #12	FGF6 (ENSMNEG00000028573) #13	C12orf4 (ENSMNEG00000029537) #14	RAD51AP1 (ENSMNEG00000031816) #15	DYRK4 (ENSMNEG00000032078) #16	AKAP3 (ENSMNEG00000030253) #17	ENSMNEG00000032661	NDUFA9 (ENSMNEG00000038549) #18	GALNT8 (ENSMNEG00000019623) #19	ENSMNEG00000031558	KCNA6 (ENSMNEG00000028058)	KCNA1 (ENSMNEG00000000927) #20	KCNA5 (ENSMNEG00000002803) #22	NTF3 (ENSMNEG00000040348) #23	ANO2 (ENSMNEG00000032451) #24	VWF (ENSMNEG00000042662) #25	CD9 (ENSMNEG00000042314) #26	ENSMNEG00000019715	PLEKHG6 (ENSMNEG00000029942) #27	TNFRSF1A (ENSMNEG00000030151) #28	SCNN1A (ENSMNEG00000029812) #29	LTBR (ENSMNEG00000030358) #30	CD27 (ENSMNEG00000007757) #31	TAPBPL (ENSMNEG00000013053) #33	ENSMNEG00000033079 #32	VAMP1 (ENSMNEG00000006897) #34	ENSMNEG00000040627	MRPL51 (ENSMNEG00000032063) #36
Cercopithecinae_b	ANCESTRAL SPECIES	43	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00910000147930	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Cercopithecinae_d	ANCESTRAL SPECIES	66	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00910000147930	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Sooty mangabey	MODERN SPECIES	609	ENSCATG00000034962	CCND2 (ENSCATG00000036524) #10	ENSCATG00000002189	TIGAR (ENSCATG00000033179) #11	FGF23 (ENSCATG00000039115) #12	FGF6 (ENSCATG00000036599) #13	C12orf4 (ENSCATG00000039222) #14	RAD51AP1 (ENSCATG00000004218) #15	DYRK4 (ENSCATG00000015593) #16	AKAP3 (ENSCATG00000010085) #17	ENSCATG00000038239	NDUFA9 (ENSCATG00000045092) #18	GALNT8 (ENSCATG00000004634) #19	KCNA6 (ENSCATG00000007852)	KCNA1 (ENSCATG00000008651) #20	KCNA5 (ENSCATG00000010259) #22	NTF3 (ENSCATG00000021529) #23	ANO2 (ENSCATG00000031462) #24	VWF (ENSCATG00000015582) #25	CD9 (ENSCATG00000042280) #26	PLEKHG6 (ENSCATG00000036270) #27	TNFRSF1A (ENSCATG00000034361) #28	SCNN1A (ENSCATG00000044711) #29	LTBR (ENSCATG00000033469) #30	CD27 (ENSCATG00000035274) #31	TAPBPL (ENSCATG00000045104) #33	ENSCATG00000041389 #32	VAMP1 (ENSCATG00000037454) #34	ENSCATG00000040777	ENSCATG00000035721	MRPL51 (ENSCATG00000035810) #36
Drill	MODERN SPECIES	1201	ENSMLEG00000032379	CCND2 (ENSMLEG00000041231) #10	ENSMLEG00000009907	TIGAR (ENSMLEG00000040844) #11	FGF23 (ENSMLEG00000027261) #12	FGF6 (ENSMLEG00000036187) #13	C12orf4 (ENSMLEG00000032685) #14	RAD51AP1 (ENSMLEG00000025950) #15	DYRK4 (ENSMLEG00000004564) #16	ENSMLEG00000036059	AKAP3 (ENSMLEG00000028764) #17	NDUFA9 (ENSMLEG00000029904) #18	GALNT8 (ENSMLEG00000036178) #19	KCNA6 (ENSMLEG00000037817)	KCNA1 (ENSMLEG00000008599) #20	KCNA5 (ENSMLEG00000027971) #22	NTF3 (ENSMLEG00000026892) #23	ANO2 (ENSMLEG00000036101) #24
Olive baboon	MODERN SPECIES	19	PARP11 (ENSPANG00000003839) #8	CCND2 (ENSPANG00000041720) #10	TIGAR (ENSPANG00000000364) #11	ENSPANG00000036128	FGF23 (ENSPANG00000015338) #12	FGF6 (ENSPANG00000019526) #13	C12orf4 (ENSPANG00000024048) #14	ENSPANG00000045529	RAD51AP1 (ENSPANG00000025210) #15	DYRK4 (ENSPANG00000019887) #16	AKAP3 (ENSPANG00000002246) #17	NDUFA9 (ENSPANG00000008470) #18	GALNT8 (ENSPANG00000016451) #19	KCNA6 (ENSPANG00000041621)	KCNA1 (ENSPANG00000014957) #20	KCNA5 (ENSPANG00000006640) #22	NTF3 (ENSPANG00000018735) #23	VWF (ENSPANG00000026470) #25	CD9 (ENSPANG00000019524) #26	ENSPANG00000035005	PLEKHG6 (ENSPANG00000010167) #27	TNFRSF1A (ENSPANG00000025410) #28	SCNN1A (ENSPANG00000009143) #29	ENSPANG00000013116 #30	ENSPANG00000047682 #30	CD27 (ENSPANG00000010690) #31	TAPBPL (ENSPANG00000017797) #33	VAMP1 (ENSPANG00000024944) #34	MRPL51 (ENSPANG00000044908) #36	NCAPD2 (ENSPANG00000017213) #37	ENSPANG00000020757
Vervet Monkey	MODERN SPECIES	2	PRMT8 (ENSCSAG00000011220)	CRACR2A (ENSCSAG00000011199) #7	PARP11 (ENSCSAG00000011139) #8	CCND2 (ENSCSAG00000011132) #10	TIGAR (ENSCSAG00000011127) #11	FGF23 (ENSCSAG00000011120) #12	FGF6 (ENSCSAG00000011115) #13	C12orf4 (ENSCSAG00000011105) #14	RAD51AP1 (ENSCSAG00000011084) #15	DYRK4 (ENSCSAG00000011051) #16	AKAP3 (ENSCSAG00000011003) #17	NDUFA9 (ENSCSAG00000010997) #18	GALNT8 (ENSCSAG00000010984) #19	KCNA6 (ENSCSAG00000019219)	KCNA1 (ENSCSAG00000019220) #20	KCNA5 (ENSCSAG00000019221) #22	NTF3 (ENSCSAG00000010965) #23	ANO2 (ENSCSAG00000010915) #24	VWF (ENSCSAG00000010786) #25	CD9 (ENSCSAG00000010749) #26	PLEKHG6 (ENSCSAG00000010727) #27	TNFRSF1A (ENSCSAG00000010687) #28	SCNN1A (ENSCSAG00000010676) #29	LTBR (ENSCSAG00000010660) #30	CD27 (ENSCSAG00000010635) #31	TAPBPL (ENSCSAG00000010603) #33	ENSCSAG00000010592 #34	MRPL51 (ENSCSAG00000010565) #36	NCAPD2 (ENSCSAG00000010550) #37	ENSCSAG00000010531	IFFO1 (ENSCSAG00000010518)
Rhinopithecus	ANCESTRAL SPECIES	54							ENSGT00940000160242	ENSGT00940000154107.a	ENSGT00940000154995	ENSGT00390000017863	ENSGT00940000154337	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT01030000240266	ENSGT00940000161390 #34	ENSGT00390000018821.n #36	ENSGT00940000153566.a #37
Black snub-nosed monkey	MODERN SPECIES	724			CCND2 (ENSRBIG00000043133) #10	TIGAR (ENSRBIG00000027860) #11	ENSRBIG00000036227	FGF23 (ENSRBIG00000037589) #12	FGF6 (ENSRBIG00000039179) #13	C12orf4 (ENSRBIG00000025209) #14	DYRK4 (ENSRBIG00000031639) #16	AKAP3 (ENSRBIG00000023958) #17	ENSRBIG00000031524	NDUFA9 (ENSRBIG00000035519) #18	GALNT8 (ENSRBIG00000033186) #19	KCNA6 (ENSRBIG00000028178)	KCNA1 (ENSRBIG00000026727) #20	KCNA5 (ENSRBIG00000020245) #22	NTF3 (ENSRBIG00000034368) #23	ANO2 (ENSRBIG00000033075) #24	VWF (ENSRBIG00000037765) #25	CD9 (ENSRBIG00000041088) #26	PLEKHG6 (ENSRBIG00000035904) #27	TNFRSF1A (ENSRBIG00000043065) #28	SCNN1A (ENSRBIG00000029623) #29	LTBR (ENSRBIG00000032304) #30	CD27 (ENSRBIG00000028838) #31	TAPBPL (ENSRBIG00000043531) #33	ENSRBIG00000034062 #32	VAMP1 (ENSRBIG00000037948) #34	ENSRBIG00000029955	ENSRBIG00000029250 #36	NCAPD2 (ENSRBIG00000041534) #37
Golden snub-nosed monkey	MODERN SPECIES	3349	ENSRROG00000040245	CCND2 (ENSRROG00000035130) #10	TIGAR (ENSRROG00000040908) #11	ENSRROG00000028353	FGF23 (ENSRROG00000039146) #12	FGF6 (ENSRROG00000039924) #13	C12orf4 (ENSRROG00000031257) #14	RAD51AP1 (ENSRROG00000003617) #15	DYRK4 (ENSRROG00000013343) #16	AKAP3 (ENSRROG00000035825) #17	ENSRROG00000031720	NDUFA9 (ENSRROG00000034745) #18	GALNT8 (ENSRROG00000037046) #19	KCNA6 (ENSRROG00000022876)	KCNA1 (ENSRROG00000024513) #20	KCNA5 (ENSRROG00000025605) #22
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00390000000475.sb.u.d.b	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000156857 #8	ENSGT00950000183206.b.c.a.b.a.b.c.a	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00390000000475.sb.u.d.b	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00510000046986.n.a.b	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00910000148152
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00390000000475.sb.u.d.b	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00510000046986.n.a.b	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34	ENSGT00910000148152	ENSGT00390000018821 #36
Human	MODERN SPECIES	3	CRACR2A (ENSG00000130038) #7	PARP11 (ENSG00000111224) #8	CCND2 (ENSG00000118971) #10	TIGAR (ENSG00000078237) #11	FGF23 (ENSG00000118972) #12	FGF6 (ENSG00000111241) #13	C12orf4 (ENSG00000047621) #14	RAD51AP1 (ENSG00000111247) #15	DYRK4 (ENSG00000010219) #16	AKAP3 (ENSG00000111254) #17	NDUFA9 (ENSG00000139180) #18	ENSG00000255639	GALNT8 (ENSG00000130035) #19	KCNA6 (ENSG00000151079)	KCNA1 (ENSG00000111262) #20	KCNA5 (ENSG00000130037) #22	NTF3 (ENSG00000185652) #23	ANO2 (ENSG00000047617) #24	VWF (ENSG00000110799) #25	CD9 (ENSG00000010278) #26	PLEKHG6 (ENSG00000008323) #27	TNFRSF1A (ENSG00000067182) #28	SCNN1A (ENSG00000111319) #29	LTBR (ENSG00000111321) #30	CD27 (ENSG00000139193) #31	TAPBPL (ENSG00000139192) #33	VAMP1 (ENSG00000139190) #34	MRPL51 (ENSG00000111639) #36	NCAPD2 (ENSG00000010292) #37	GAPDH (ENSG00000111640)	IFFO1 (ENSG00000010295)
Pan	ANCESTRAL SPECIES	31	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00390000000475.sb.u.d.b	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A.i #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.m #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00510000046986.n.a.b	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00950000183030.m.b.b.m.b	ENSGT00390000008496.eb	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146741 #32	ENSGT00940000161390 #34
Chimpanzee	MODERN SPECIES	3	PARP11 (ENSPTRG00000004546) #8	CCND2 (ENSPTRG00000004549) #10	TIGAR (ENSPTRG00000004550) #11	ENSPTRG00000048422	FGF23 (ENSPTRG00000004551) #12	FGF6 (ENSPTRG00000046747) #13	C12H12orf4 (ENSPTRG00000004553) #14	RAD51AP1 (ENSPTRG00000004554) #15	DYRK4 (ENSPTRG00000004555) #16	AKAP3 (ENSPTRG00000004556) #17	ENSPTRG00000046718	NDUFA9 (ENSPTRG00000004557) #18	GALNT8 (ENSPTRG00000052358) #19	KCNA6 (ENSPTRG00000029830)	KCNA1 (ENSPTRG00000004561) #20	KCNA5 (ENSPTRG00000004563) #22	NTF3 (ENSPTRG00000004564) #23	ANO2 (ENSPTRG00000004565) #24	VWF (ENSPTRG00000004566) #25	CD9 (ENSPTRG00000004567) #26	ENSPTRG00000049700	PLEKHG6 (ENSPTRG00000004569) #27	TNFRSF1A (ENSPTRG00000004570) #28	SCNN1A (ENSPTRG00000004571) #29	LTBR (ENSPTRG00000004572) #30	ENSPTRG00000048966	ENSPTRG00000050411	CD27 (ENSPTRG00000029823) #31	TAPBPL (ENSPTRG00000004573) #33	ENSPTRG00000051882 #32	VAMP1 (ENSPTRG00000004574) #34
Gorilla	MODERN SPECIES	3	ENSGGOG00000037850	CCND2 (ENSGGOG00000009479) #10	TIGAR (ENSGGOG00000028468) #11	ENSGGOG00000024722	FGF23 (ENSGGOG00000002967) #12	FGF6 (ENSGGOG00000007592) #13	C12orf4 (ENSGGOG00000025071) #14	RAD51AP1 (ENSGGOG00000004444) #15	DYRK4 (ENSGGOG00000011062) #16	AKAP3 (ENSGGOG00000014277) #17	ENSGGOG00000036562	NDUFA9 (ENSGGOG00000006076) #18	GALNT8 (ENSGGOG00000016708) #19	KCNA6 (ENSGGOG00000036395)	KCNA1 (ENSGGOG00000027559) #20	KCNA5 (ENSGGOG00000012042) #22	NTF3 (ENSGGOG00000005894) #23	ANO2 (ENSGGOG00000008975) #24	ENSGGOG00000016760 #25	ENSGGOG00000008208 #26	ENSGGOG00000028258	PLEKHG6 (ENSGGOG00000011884) #27	TNFRSF1A (ENSGGOG00000011904) #28	SCNN1A (ENSGGOG00000010834) #29	LTBR (ENSGGOG00000010848) #30	ENSGGOG00000024862	ENSGGOG00000022764	CD27 (ENSGGOG00000004650) #31	TAPBPL (ENSGGOG00000004655) #33	ENSGGOG00000041472 #32	VAMP1 (ENSGGOG00000036332) #34
Orangutan	MODERN SPECIES	3	PARP11 (ENSPPYG00000004162) #8	ENSPPYG00000040206	CCND2 (ENSPPYG00000004164) #10	TIGAR (ENSPPYG00000004165) #11	ENSPPYG00000010678	FGF23 (ENSPPYG00000036570) #12	FGF6 (ENSPPYG00000004166) #13	C12H12orf4 (ENSPPYG00000004167) #14	RAD51AP1 (ENSPPYG00000004168) #15	DYRK4 (ENSPPYG00000004169) #16	AKAP3 (ENSPPYG00000004170) #17	NDUFA9 (ENSPPYG00000004171) #18	GALNT8 (ENSPPYG00000004172) #19	KCNA6 (ENSPPYG00000004173)	KCNA1 (ENSPPYG00000004174) #20	KCNA5 (ENSPPYG00000004176) #22	NTF3 (ENSPPYG00000004178) #23	ANO2 (ENSPPYG00000004179) #24	VWF (ENSPPYG00000004180) #25	CD9 (ENSPPYG00000004181) #26	PLEKHG6 (ENSPPYG00000004182) #27	TNFRSF1A (ENSPPYG00000004183) #28	SCNN1A (ENSPPYG00000004184) #29	LTBR (ENSPPYG00000039662) #30	CD27 (ENSPPYG00000029486) #31	TAPBPL (ENSPPYG00000004186) #33	VAMP1 (ENSPPYG00000004187) #34	MRPL51 (ENSPPYG00000025846) #36	NCAPD2 (ENSPPYG00000004188) #37	GAPDH (ENSPPYG00000004189)	IFFO1 (ENSPPYG00000004190)
Platyrrhini	ANCESTRAL SPECIES	46	ENSGT00950000182956.b.b.a.b	ENSGT00950000182869.e.a.b.sb.b.b.b	ENSGT00940000158225	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a.g #37	ENSGT00940000153298.n.a.a.d.b.a
Cebidae	ANCESTRAL SPECIES	41	ENSGT00950000182956.b.b.a.b	ENSGT00950000182869.e.a.b.sb.b.b.b	ENSGT00940000158225	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a.g #37	ENSGT00940000153298.n.a.a.d.b.a
Cebidae_a	ANCESTRAL SPECIES	94	ENSGT00950000182956.b.b.a.b	ENSGT00950000182869.e.a.b.sb.b.b.b	ENSGT00940000158225	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00910000146645	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a.g #37	ENSGT00940000153298.n.a.a.d.b.a
Capuchin	MODERN SPECIES	187													ENSCCAG00000029937	KCNA6 (ENSCCAG00000019213)	KCNA1 (ENSCCAG00000032560) #20	KCNA5 (ENSCCAG00000032585) #22	NTF3 (ENSCCAG00000037158) #23	ANO2 (ENSCCAG00000022139) #24	VWF (ENSCCAG00000029371) #25	CD9 (ENSCCAG00000035576) #26	PLEKHG6 (ENSCCAG00000024072) #27	TNFRSF1A (ENSCCAG00000036380) #28	SCNN1A (ENSCCAG00000024002) #29	LTBR (ENSCCAG00000037636) #30	CD27 (ENSCCAG00000032627) #31	TAPBPL (ENSCCAG00000019333) #33	ENSCCAG00000030371	VAMP1 (ENSCCAG00000030242) #34	MRPL51 (ENSCCAG00000030846) #36	ENSCCAG00000037395 #37	ENSCCAG00000036787
Bolivian squirrel monkey	MODERN SPECIES	197	TSPAN9 (ENSSBOG00000000277)	PRMT8 (ENSSBOG00000027867)	CRACR2A (ENSSBOG00000024718) #7	ENSSBOG00000031519	PARP11 (ENSSBOG00000032202) #8	CCND2 (ENSSBOG00000022163) #10	TIGAR (ENSSBOG00000035082) #11	FGF23 (ENSSBOG00000027393) #12	FGF6 (ENSSBOG00000024969) #13	C12orf4 (ENSSBOG00000030014) #14	RAD51AP1 (ENSSBOG00000031364) #15	DYRK4 (ENSSBOG00000022376) #16	ENSSBOG00000023354	KCNA6 (ENSSBOG00000012723)	KCNA1 (ENSSBOG00000036388) #20	KCNA5 (ENSSBOG00000036379) #22	NTF3 (ENSSBOG00000025798) #23	ANO2 (ENSSBOG00000031554) #24	VWF (ENSSBOG00000029305) #25	CD9 (ENSSBOG00000021142) #26	PLEKHG6 (ENSSBOG00000029167) #27	TNFRSF1A (ENSSBOG00000029812) #28	SCNN1A (ENSSBOG00000028462) #29	LTBR (ENSSBOG00000031167) #30	CD27 (ENSSBOG00000023847) #31	ENSSBOG00000019610	TAPBPL (ENSSBOG00000025031) #33	VAMP1 (ENSSBOG00000017216) #34	MRPL51 (ENSSBOG00000028416) #36	ENSSBOG00000029006 #37	ENSSBOG00000030439
Marmoset	MODERN SPECIES	21	ENSCJAG00000063173	CRACR2A (ENSCJAG00000018917) #7	ENSCJAG00000082222	PARP11 (ENSCJAG00000001570) #8	ENSCJAG00000021822	ENSCJAG00000001586	CCND2 (ENSCJAG00000001593) #10	TIGAR (ENSCJAG00000040111) #11	FGF23 (ENSCJAG00000069632) #12	FGF6 (ENSCJAG00000001613) #13	ENSCJAG00000001628 #14	ENSCJAG00000001647 #15	ENSCJAG00000075610	KCNA6 (ENSCJAG00000061475)	KCNA1 (ENSCJAG00000068371) #20	KCNA5 (ENSCJAG00000068399) #22	NTF3 (ENSCJAG00000000605) #23	ANO2 (ENSCJAG00000000606) #24	VWF (ENSCJAG00000000613) #25	CD9 (ENSCJAG00000000659) #26	PLEKHG6 (ENSCJAG00000000666) #27	TNFRSF1A (ENSCJAG00000000674) #28	SCNN1A (ENSCJAG00000000689) #29	LTBR (ENSCJAG00000000706) #30	CD27 (ENSCJAG00000000719) #31	TAPBPL (ENSCJAG00000000722) #33	VAMP1 (ENSCJAG00000044254) #34	ENSCJAG00000046151	ENSCJAG00000065290 #36	NCAPD2 (ENSCJAG00000007561) #37	ENSCJAG00000084549 #36
Mas night monkey	MODERN SPECIES	276		PRMT8 (ENSANAG00000034110)	CRACR2A (ENSANAG00000036979) #7	PARP11 (ENSANAG00000026970) #8	CCND2 (ENSANAG00000032048) #10	ENSANAG00000016245	TIGAR (ENSANAG00000023129) #11	FGF23 (ENSANAG00000030671) #12	FGF6 (ENSANAG00000002979) #13	C12orf4 (ENSANAG00000023215) #14	RAD51AP1 (ENSANAG00000022244) #15	ENSANAG00000028867	ENSANAG00000029647	KCNA6 (ENSANAG00000031710)	KCNA1 (ENSANAG00000003873) #20	KCNA5 (ENSANAG00000016761) #22	ENSANAG00000022124	NTF3 (ENSANAG00000022721) #23	ANO2 (ENSANAG00000016498) #24	VWF (ENSANAG00000023811) #25	ENSANAG00000038429	CD9 (ENSANAG00000029016) #26	ENSANAG00000024471	PLEKHG6 (ENSANAG00000025040) #27	TNFRSF1A (ENSANAG00000032611) #28	SCNN1A (ENSANAG00000032491) #29	LTBR (ENSANAG00000029675) #30	FZD10 (ENSANAG00000019393)	PIWIL1 (ENSANAG00000024013)	RIMBP2 (ENSANAG00000024237)	STX2 (ENSANAG00000027879)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n
Glires	ANCESTRAL SPECIES	4	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n
Lagomorpha	ANCESTRAL SPECIES	37	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Rabbit	MODERN SPECIES	19	PRMT8 (ENSOCUG00000005310)	CRACR2A (ENSOCUG00000005317) #7	PARP11 (ENSOCUG00000016536) #8	CCND2 (ENSOCUG00000015589) #10	TIGAR (ENSOCUG00000001952) #11	FGF23 (ENSOCUG00000021580) #12	FGF6 (ENSOCUG00000001955) #13	C12orf4 (ENSOCUG00000001956) #14	RAD51AP1 (ENSOCUG00000001961) #15	DYRK4 (ENSOCUG00000001965) #16	AKAP3 (ENSOCUG00000001970) #17	NDUFA9 (ENSOCUG00000014894) #18	GALNT8 (ENSOCUG00000009557) #19	KCNA6 (ENSOCUG00000016046)	KCNA1 (ENSOCUG00000004459) #20	KCNA5 (ENSOCUG00000000674) #22	ENSOCUG00000030707	NTF3 (ENSOCUG00000016450) #23	ENSOCUG00000039598 #24	ENSOCUG00000006775 #24	VWF (ENSOCUG00000006783) #25	ENSOCUG00000010123 #26	PLEKHG6 (ENSOCUG00000010130) #27	TNFRSF1A (ENSOCUG00000010146) #28	SCNN1A (ENSOCUG00000010152) #29	LTBR (ENSOCUG00000001292) #30	CD27 (ENSOCUG00000008159) #31	TAPBPL (ENSOCUG00000008163) #33	VAMP1 (ENSOCUG00000021107) #34	MRPL51 (ENSOCUG00000008170) #36	NCAPD2 (ENSOCUG00000008176) #37
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n
Rodentia_B	ANCESTRAL SPECIES	35	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a
Myomorpha	ANCESTRAL SPECIES	15	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a
Muroidea	ANCESTRAL SPECIES	24	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.b.a
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.a
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00950000182825.B	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.a
Golden Hamster	MODERN SPECIES	779	Tspan11 (ENSMAUG00000013785)	Prmt8 (ENSMAUG00000008997)	Cracr2a (ENSMAUG00000010171) #7	Parp11 (ENSMAUG00000019478) #8	ENSMAUG00000020887	Ccnd2 (ENSMAUG00000016865) #10	Tigar (ENSMAUG00000011832) #11	Fgf23 (ENSMAUG00000008954) #12	Fgf6 (ENSMAUG00000020106) #13	Rad51ap1 (ENSMAUG00000010645) #15	Dyrk4 (ENSMAUG00000013998) #16	Akap3 (ENSMAUG00000000610) #17	Ndufa9 (ENSMAUG00000000394) #18	Kcna6 (ENSMAUG00000012440)	Kcna1 (ENSMAUG00000011205) #20	Kcna5 (ENSMAUG00000010669) #22	Ntf3 (ENSMAUG00000022021) #23	Ano2 (ENSMAUG00000019932) #24	Vwf (ENSMAUG00000009725) #25	Cd9 (ENSMAUG00000014483) #26	Plekhg6 (ENSMAUG00000003624) #27	Tnfrsf1a (ENSMAUG00000002877) #28	ENSMAUG00000001033 #29	Ltbr (ENSMAUG00000014994) #30	ENSMAUG00000000873	ENSMAUG00000014351 #33	ENSMAUG00000011094 #31	Vamp1 (ENSMAUG00000013113) #34	Mrpl51 (ENSMAUG00000010740) #36	ENSMAUG00000013625 #37
Chinese hamster chok1gshd	MODERN SPECIES	289	Prmt8 (ENSCGRG00001010178)	Cracr2a (ENSCGRG00001008752) #7	Parp11 (ENSCGRG00001022479) #8	Ccnd2 (ENSCGRG00001021114) #10	Tigar (ENSCGRG00001020919) #11	Fgf23 (ENSCGRG00001020603) #12	Fgf6 (ENSCGRG00001020088) #13	D6Wsu163e (ENSCGRG00001018134) #14	Rad51ap1 (ENSCGRG00001016382) #15	Dyrk4 (ENSCGRG00001015464) #16	Akap3 (ENSCGRG00001015006) #17	Ndufa9 (ENSCGRG00001013832) #18	ENSCGRG00001017456 #19	Kcna6 (ENSCGRG00001016072)	Kcna1 (ENSCGRG00001015614) #20	Kcna5 (ENSCGRG00001015444) #22	Ntf3 (ENSCGRG00001015283) #23	Ano2 (ENSCGRG00001013479) #24	Vwf (ENSCGRG00001000364) #25	Cd9 (ENSCGRG00001022703) #26	ENSCGRG00001015575	Plekhg6 (ENSCGRG00001021507) #27	Tnfrsf1a (ENSCGRG00001021062) #28	Scnn1a (ENSCGRG00001020304) #29	Ltbr (ENSCGRG00001015407) #30	ENSCGRG00001013937	Cd27 (ENSCGRG00001009970) #31	ENSCGRG00001020124 #33	Vamp1 (ENSCGRG00001014055) #34	ENSCGRG00001010566 #36	Ncapd2 (ENSCGRG00001002247) #37
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00910000146741 #32	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.a
Prairie vole	MODERN SPECIES	84	Parp11 (ENSMOCG00000019262) #8	ENSMOCG00000015905	Ccnd2 (ENSMOCG00000016031) #10	Tigar (ENSMOCG00000009323) #11	Fgf23 (ENSMOCG00000014012) #12	Fgf6 (ENSMOCG00000013241) #13	D6Wsu163e (ENSMOCG00000004952) #14	Rad51ap1 (ENSMOCG00000019651) #15	ENSMOCG00000015003	Dyrk4 (ENSMOCG00000013112) #16	Akap3 (ENSMOCG00000012229) #17	Ndufa9 (ENSMOCG00000008163) #18	ENSMOCG00000010172	Kcna6 (ENSMOCG00000007165)	Kcna1 (ENSMOCG00000003348) #20	Kcna5 (ENSMOCG00000002810) #22	ENSMOCG00000015356	Ntf3 (ENSMOCG00000001488) #23	Ano2 (ENSMOCG00000000380) #24	Vwf (ENSMOCG00000005320) #25	Cd9 (ENSMOCG00000022019) #26	Plekhg6 (ENSMOCG00000006971) #27	Tnfrsf1a (ENSMOCG00000013868) #28	Scnn1a (ENSMOCG00000000794) #29	Ltbr (ENSMOCG00000015975) #30	Cd27 (ENSMOCG00000017717) #31	Tapbpl (ENSMOCG00000000244) #33	Vamp1 (ENSMOCG00000019201) #34	Mrpl51 (ENSMOCG00000013685) #36	ENSMOCG00000000297 #37	ENSMOCG00000000471
Northern American deer mouse	MODERN SPECIES	16	Cracr2a (ENSPEMG00000015307) #7	Parp11 (ENSPEMG00000028145) #8	ENSPEMG00000027566	Ccnd2 (ENSPEMG00000024795) #10	Tigar (ENSPEMG00000024358) #11	Fgf23 (ENSPEMG00000011801) #12	Fgf6 (ENSPEMG00000028297) #13	D6Wsu163e (ENSPEMG00000016634) #14	Rad51ap1 (ENSPEMG00000004516) #15	Dyrk4 (ENSPEMG00000014698) #16	ENSPEMG00000010840 #17	Ndufa9 (ENSPEMG00000001578) #18	ENSPEMG00000029830 #19	Kcna6 (ENSPEMG00000001594)	Kcna1 (ENSPEMG00000024438) #20	Kcna5 (ENSPEMG00000008853) #22	Ntf3 (ENSPEMG00000016431) #23	Ano2 (ENSPEMG00000014319) #24	Vwf (ENSPEMG00000010217) #25	Cd9 (ENSPEMG00000008270) #26	Plekhg6 (ENSPEMG00000013888) #27	Tnfrsf1a (ENSPEMG00000009612) #28	Scnn1a (ENSPEMG00000012010) #29	Ltbr (ENSPEMG00000014957) #30	ENSPEMG00000025965	Cd27 (ENSPEMG00000012177) #31	ENSPEMG00000028083 #32	Tapbpl (ENSPEMG00000003668) #33	Vamp1 (ENSPEMG00000006934) #34	Mrpl51 (ENSPEMG00000008667) #36	Ncapd2 (ENSPEMG00000016112) #37
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.b.a.a.a	ENSGT00510000046803.b.b
Mus	ANCESTRAL SPECIES	12	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.b.a.a.a	ENSGT00510000046803.b.b
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.p #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.b.a.a.a	ENSGT00510000046803.b.b
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.p #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00950000182825.B	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b
Mouse	MODERN SPECIES	15	Tspan11 (ENSMUSG00000030351)	Prmt8 (ENSMUSG00000030350)	Cracr2a (ENSMUSG00000061414) #7	Parp11 (ENSMUSG00000037997) #8	Ccnd2 (ENSMUSG00000000184) #10	Tigar (ENSMUSG00000038028) #11	Fgf23 (ENSMUSG00000000182) #12	Fgf6 (ENSMUSG00000000183) #13	D6Wsu163e (ENSMUSG00000030347) #14	Rad51ap1 (ENSMUSG00000030346) #15	Dyrk4 (ENSMUSG00000030345) #16	Akap3 (ENSMUSG00000030344) #17	Ndufa9 (ENSMUSG00000000399) #18	Kcna6 (ENSMUSG00000038077)	Kcna1 (ENSMUSG00000047976) #20	Kcna5 (ENSMUSG00000045534) #22	Ntf3 (ENSMUSG00000049107) #23	Ano2 (ENSMUSG00000038115) #24	Vwf (ENSMUSG00000001930) #25	Cd9 (ENSMUSG00000030342) #26	Plekhg6 (ENSMUSG00000038167) #27	Tnfrsf1a (ENSMUSG00000030341) #28	Scnn1a (ENSMUSG00000030340) #29	Ltbr (ENSMUSG00000030339) #30	Tuba3a (ENSMUSG00000067702)	Cd27 (ENSMUSG00000030336) #31	Tapbpl (ENSMUSG00000038213) #33	Vamp1 (ENSMUSG00000030337) #34	Mrpl51 (ENSMUSG00000030335) #36	Ncapd2 (ENSMUSG00000038252) #37	Gapdh (ENSMUSG00000057666)
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865.p #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00950000182825.B	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b
spretus	MODERN SPECIES	15	Tspan11 (MGP_SPRETEiJ_G0029944)	Prmt8 (MGP_SPRETEiJ_G0029943)	MGP_SPRETEiJ_G0029942 #7	Parp11 (MGP_SPRETEiJ_G0029941) #8	Ccnd2 (MGP_SPRETEiJ_G0029940) #10	Tigar (MGP_SPRETEiJ_G0029939) #11	Fgf23 (MGP_SPRETEiJ_G0029938) #12	Fgf6 (MGP_SPRETEiJ_G0029937) #13	MGP_SPRETEiJ_G0029936 #14	Rad51ap1 (MGP_SPRETEiJ_G0029935) #15	Dyrk4 (MGP_SPRETEiJ_G0029934) #16	Akap3 (MGP_SPRETEiJ_G0029933) #17	Ndufa9 (MGP_SPRETEiJ_G0029932) #18	Kcna6 (MGP_SPRETEiJ_G0029931)	Kcna1 (MGP_SPRETEiJ_G0029930) #20	Kcna5 (MGP_SPRETEiJ_G0029929) #22	Ntf3 (MGP_SPRETEiJ_G0029928) #23	Ano2 (MGP_SPRETEiJ_G0029927) #24	Vwf (MGP_SPRETEiJ_G0029926) #25	Cd9 (MGP_SPRETEiJ_G0029925) #26	Plekhg6 (MGP_SPRETEiJ_G0029924) #27	Tnfrsf1a (MGP_SPRETEiJ_G0029923) #28	Scnn1a (MGP_SPRETEiJ_G0029922) #29	Ltbr (MGP_SPRETEiJ_G0029921) #30	MGP_SPRETEiJ_G0029920	Cd27 (MGP_SPRETEiJ_G0029919) #31	Tapbpl (MGP_SPRETEiJ_G0029918) #33	Vamp1 (MGP_SPRETEiJ_G0029917) #34	Mrpl51 (MGP_SPRETEiJ_G0029916) #36	Ncapd2 (MGP_SPRETEiJ_G0029915) #37	Iffo1 (MGP_SPRETEiJ_G0029913)
Steppe mouse	MODERN SPECIES	3251	Parp11 (ENSMSIG00000024808) #8	ENSMSIG00000024833	ENSMSIG00000024875	ENSMSIG00000024876	Ccnd2 (ENSMSIG00000024886) #10	Tigar (ENSMSIG00000024906) #11	Fgf23 (ENSMSIG00000024926) #12	Fgf6 (ENSMSIG00000024934) #13	ENSMSIG00000024945	D6Wsu163e (ENSMSIG00000024953) #14	Rad51ap1 (ENSMSIG00000024979) #15	Dyrk4 (ENSMSIG00000025025) #16	Akap3 (ENSMSIG00000025072) #17	ENSMSIG00000025084 #18	Kcna6 (ENSMSIG00000025126)	Kcna5 (ENSMSIG00000025136) #22	Ntf3 (ENSMSIG00000025145) #23	ENSMSIG00000025156	Ano2 (ENSMSIG00000025157) #24	Vwf (ENSMSIG00000025225) #25
Ryukyu mouse	MODERN SPECIES	15	Tspan11 (MGP_CAROLIEiJ_G0028900)	Prmt8 (MGP_CAROLIEiJ_G0028899)	MGP_CAROLIEiJ_G0028898 #7	Parp11 (MGP_CAROLIEiJ_G0028897) #8	Ccnd2 (MGP_CAROLIEiJ_G0028896) #10	Tigar (MGP_CAROLIEiJ_G0028895) #11	Fgf23 (MGP_CAROLIEiJ_G0028894) #12	Fgf6 (MGP_CAROLIEiJ_G0028893) #13	D6Wsu163e (MGP_CAROLIEiJ_G0028892) #14	Rad51ap1 (MGP_CAROLIEiJ_G0028891) #15	Dyrk4 (MGP_CAROLIEiJ_G0028890) #16	Akap3 (MGP_CAROLIEiJ_G0028889) #17	Ndufa9 (MGP_CAROLIEiJ_G0028888) #18	Kcna6 (MGP_CAROLIEiJ_G0028887)	Kcna1 (MGP_CAROLIEiJ_G0028886) #20	Kcna5 (MGP_CAROLIEiJ_G0028885) #22	Ntf3 (MGP_CAROLIEiJ_G0028884) #23	MGP_CAROLIEiJ_G0028883 #24	MGP_CAROLIEiJ_G0028882 #25	MGP_CAROLIEiJ_G0028881 #26	Tnfrsf1a (MGP_CAROLIEiJ_G0028880) #28	Scnn1a (MGP_CAROLIEiJ_G0028879) #29	MGP_CAROLIEiJ_G0028878 #30	MGP_CAROLIEiJ_G0028877	Cd27 (MGP_CAROLIEiJ_G0028876) #31	Tapbpl (MGP_CAROLIEiJ_G0028875) #33	MGP_CAROLIEiJ_G0028874 #34	MGP_CAROLIEiJ_G0028872	Iffo1 (MGP_CAROLIEiJ_G0028870)	MGP_CAROLIEiJ_G0028869	Lpar5 (MGP_CAROLIEiJ_G0028868)
Shrew mouse	MODERN SPECIES	11	Tspan11 (MGP_PahariEiJ_G0022661)	Prmt8 (MGP_PahariEiJ_G0022660)	MGP_PahariEiJ_G0022659 #7	Parp11 (MGP_PahariEiJ_G0022658) #8	Ccnd2 (MGP_PahariEiJ_G0022657) #10	Tigar (MGP_PahariEiJ_G0022656) #11	Fgf23 (MGP_PahariEiJ_G0022655) #12	Fgf6 (MGP_PahariEiJ_G0022654) #13	D6Wsu163e (MGP_PahariEiJ_G0022653) #14	Rad51ap1 (MGP_PahariEiJ_G0022652) #15	Dyrk4 (MGP_PahariEiJ_G0022651) #16	Akap3 (MGP_PahariEiJ_G0022650) #17	MGP_PahariEiJ_G0022649 #18	Kcna6 (MGP_PahariEiJ_G0022648)	Kcna1 (MGP_PahariEiJ_G0022647) #20	Kcna5 (MGP_PahariEiJ_G0022646) #22	Ntf3 (MGP_PahariEiJ_G0022645) #23	Ano2 (MGP_PahariEiJ_G0022644) #24	Vwf (MGP_PahariEiJ_G0022643) #25	Cd9 (MGP_PahariEiJ_G0022642) #26	Plekhg6 (MGP_PahariEiJ_G0022641) #27	Tnfrsf1a (MGP_PahariEiJ_G0022640) #28	Scnn1a (MGP_PahariEiJ_G0022639) #29	Ltbr (MGP_PahariEiJ_G0022638) #30	Cd27 (MGP_PahariEiJ_G0022637) #31	Tapbpl (MGP_PahariEiJ_G0022636) #33	Vamp1 (MGP_PahariEiJ_G0022635) #34	Mrpl51 (MGP_PahariEiJ_G0022634) #36	Ncapd2 (MGP_PahariEiJ_G0022633) #37	MGP_PahariEiJ_G0022632	Iffo1 (MGP_PahariEiJ_G0022631)
Rat	MODERN SPECIES	14	Tspan11 (ENSRNOG00000054360)	Prmt8 (ENSRNOG00000053804)	Cracr2a (ENSRNOG00000053449) #7	Parp11 (ENSRNOG00000060689) #8	Ccnd2 (ENSRNOG00000062959) #10	Tigar (ENSRNOG00000051816) #11	Fgf23 (ENSRNOG00000066556) #12	Fgf6 (ENSRNOG00000053662) #13	RGD1311164 (ENSRNOG00000055036) #14	Rad51ap1 (ENSRNOG00000059878) #15	Dyrk4 (ENSRNOG00000053178) #16	Akap3 (ENSRNOG00000059227) #17	Ndufa9 (ENSRNOG00000061684) #18	Kcna6 (ENSRNOG00000052486)	Kcna1 (ENSRNOG00000064052) #20	Kcna5 (ENSRNOG00000019719) #22	Ntf3 (ENSRNOG00000019716) #23	Ano2 (ENSRNOG00000023561) #24	Vwf (ENSRNOG00000019689) #25	Cd9 (ENSRNOG00000019556) #26	ENSRNOG00000064217	Plekhg6 (ENSRNOG00000019528) #27	Tnfrsf1a (ENSRNOG00000031312) #28	Scnn1a (ENSRNOG00000019368) #29	Ltbr (ENSRNOG00000019264) #30	Tuba3b (ENSRNOG00000031707)	Cd27 (ENSRNOG00000027466) #31	Vamp1 (ENSRNOG00000019219) #34	Mrpl51 (ENSRNOG00000019165) #36	Ncapd2 (ENSRNOG00000055300) #37	LOC108351137 (ENSRNOG00000018630)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1885	Tspan11 (ENSNGAG00000018720)	Prmt8 (ENSNGAG00000013585)	Cracr2a (ENSNGAG00000014625) #7	Parp11 (ENSNGAG00000022923) #8	Ccnd2 (ENSNGAG00000022547) #10	Tigar (ENSNGAG00000022268) #11	Fgf23 (ENSNGAG00000016726) #12	Fgf6 (ENSNGAG00000022008) #13	D6Wsu163e (ENSNGAG00000017926) #14	Rad51ap1 (ENSNGAG00000022898) #15	Dyrk4 (ENSNGAG00000013408) #16	Akap3 (ENSNGAG00000014699) #17	Ndufa9 (ENSNGAG00000016315) #18	Kcna6 (ENSNGAG00000011100)	Kcna1 (ENSNGAG00000011112) #20	Kcna5 (ENSNGAG00000001282) #22	Ntf3 (ENSNGAG00000023064) #23	Ano2 (ENSNGAG00000006568) #24	Vwf (ENSNGAG00000022403) #25	Cd9 (ENSNGAG00000014189) #26	ENSNGAG00000022639	Plekhg6 (ENSNGAG00000011808) #27	Tnfrsf1a (ENSNGAG00000019085) #28	Scnn1a (ENSNGAG00000019351) #29	Ltbr (ENSNGAG00000022402) #30	Cd27 (ENSNGAG00000019654) #31	Tapbpl (ENSNGAG00000023020) #33	Vamp1 (ENSNGAG00000011610) #34	Mrpl51 (ENSNGAG00000022754) #36	Ncapd2 (ENSNGAG00000021912) #37	ENSNGAG00000013476
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Marmotini	ANCESTRAL SPECIES	43	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b.k #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	892																ENSSTOG00000031798 #22
Squirrel	MODERN SPECIES	590																ENSSTOG00000030777 #22
Alpin marmot	MODERN SPECIES	69	PRMT8 (ENSMMMG00000018547)	CRACR2A (ENSMMMG00000018514) #7	PARP11 (ENSMMMG00000018491) #8	CCND2 (ENSMMMG00000018471) #10	ENSMMMG00000018453 #11	FGF23 (ENSMMMG00000018446) #12	FGF6 (ENSMMMG00000018439) #13	C12orf4 (ENSMMMG00000018429) #14	RAD51AP1 (ENSMMMG00000018419) #15	DYRK4 (ENSMMMG00000018403) #16	AKAP3 (ENSMMMG00000018391) #17	NDUFA9 (ENSMMMG00000018375) #18	GALNT8 (ENSMMMG00000018195) #19	KCNA6 (ENSMMMG00000018162)	KCNA1 (ENSMMMG00000018158) #20	KCNA5 (ENSMMMG00000018154) #22	NTF3 (ENSMMMG00000018129) #23	ANO2 (ENSMMMG00000018106) #24	VWF (ENSMMMG00000017987) #25	CD9 (ENSMMMG00000017985) #26	PLEKHG6 (ENSMMMG00000017961) #27	TNFRSF1A (ENSMMMG00000017946) #28	SCNN1A (ENSMMMG00000017899) #29	LTBR (ENSMMMG00000017889) #30	CD27 (ENSMMMG00000017884) #31	TAPBPL (ENSMMMG00000017876) #33	VAMP1 (ENSMMMG00000017864) #34	MRPL51 (ENSMMMG00000017860) #36	NCAPD2 (ENSMMMG00000017813) #37	ENSMMMG00000017572	IFFO1 (ENSMMMG00000017549)
Eurasian red squirrel	MODERN SPECIES	14	CRACR2A (ENSSVLG00005010127) #7	ENSSVLG00005010249	PARP11 (ENSSVLG00005010296) #8	CCND2 (ENSSVLG00005010393) #10	ENSSVLG00005010420 #11	FGF23 (ENSSVLG00005010492) #12	FGF6 (ENSSVLG00005010527) #13	C12orf4 (ENSSVLG00005010566) #14	RAD51AP1 (ENSSVLG00005010690) #15	DYRK4 (ENSSVLG00005010883) #16	AKAP3 (ENSSVLG00005011110) #17	NDUFA9 (ENSSVLG00005011157) #18	GALNT8 (ENSSVLG00005011294) #19	KCNA6 (ENSSVLG00005011427)	KCNA1 (ENSSVLG00005011451) #20	KCNA5 (ENSSVLG00005011478) #22	NTF3 (ENSSVLG00005011507) #23	ANO2 (ENSSVLG00005011671) #24	VWF (ENSSVLG00005012648) #25	CD9 (ENSSVLG00005013052) #26	PLEKHG6 (ENSSVLG00005013449) #27	TNFRSF1A (ENSSVLG00005013664) #28	SCNN1A (ENSSVLG00005013781) #29	ENSSVLG00005013962	LTBR (ENSSVLG00005014074) #30	CD27 (ENSSVLG00005014318) #31	TAPBPL (ENSSVLG00005014372) #33	VAMP1 (ENSSVLG00005014405) #34	MRPL51 (ENSSVLG00005014541) #36	ENSSVLG00005014610	ENSSVLG00005014703
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Long-tailed chinchilla	MODERN SPECIES	120	ENSCLAG00000013150	PRMT8 (ENSCLAG00000014521)	CRACR2A (ENSCLAG00000013246) #7	PARP11 (ENSCLAG00000012852) #8	CCND2 (ENSCLAG00000012527) #10	TIGAR (ENSCLAG00000013103) #11	FGF23 (ENSCLAG00000014451) #12	FGF6 (ENSCLAG00000013612) #13	C12orf4 (ENSCLAG00000012415) #14	RAD51AP1 (ENSCLAG00000013907) #15	DYRK4 (ENSCLAG00000016008) #16	AKAP3 (ENSCLAG00000015044) #17	NDUFA9 (ENSCLAG00000014849) #18	KCNA6 (ENSCLAG00000014216)	KCNA1 (ENSCLAG00000013088) #20	KCNA5 (ENSCLAG00000018083) #22	NTF3 (ENSCLAG00000016065) #23	ANO2 (ENSCLAG00000015450) #24	VWF (ENSCLAG00000014671) #25	CD9 (ENSCLAG00000013477) #26	PLEKHG6 (ENSCLAG00000015229) #27	TNFRSF1A (ENSCLAG00000016084) #28	SCNN1A (ENSCLAG00000015244) #29	LTBR (ENSCLAG00000013106) #30	CD27 (ENSCLAG00000016154) #31	TAPBPL (ENSCLAG00000016184) #33	VAMP1 (ENSCLAG00000012860) #34	MRPL51 (ENSCLAG00000011881) #36	NCAPD2 (ENSCLAG00000013118) #37	GAPDH (ENSCLAG00000013783)	IFFO1 (ENSCLAG00000014944)
Degu	MODERN SPECIES	219	PRMT8 (ENSODEG00000002262)	CRACR2A (ENSODEG00000002836) #7	PARP11 (ENSODEG00000002808) #8	ENSODEG00000002739	CCND2 (ENSODEG00000002727) #10	TIGAR (ENSODEG00000002673) #11	ENSODEG00000018871	FGF23 (ENSODEG00000002640) #12	FGF6 (ENSODEG00000002627) #13	ENSODEG00000002588 #14	RAD51AP1 (ENSODEG00000002547) #15	DYRK4 (ENSODEG00000002344) #16	AKAP3 (ENSODEG00000003183) #17	NDUFA9 (ENSODEG00000003154) #18	KCNA6 (ENSODEG00000019303)	KCNA5 (ENSODEG00000019098) #22	NTF3 (ENSODEG00000003025) #23	ENSODEG00000018854	ANO2 (ENSODEG00000002927) #24	VWF (ENSODEG00000002617) #25	CD9 (ENSODEG00000005241) #26	PLEKHG6 (ENSODEG00000005186) #27	TNFRSF1A (ENSODEG00000004861) #28	SCNN1A (ENSODEG00000004767) #29	LTBR (ENSODEG00000004616) #30	CD27 (ENSODEG00000004529) #31	TAPBPL (ENSODEG00000004477) #33	VAMP1 (ENSODEG00000004453) #34	MRPL51 (ENSODEG00000004435) #36	NCAPD2 (ENSODEG00000004156) #37	ENSODEG00000004114
Guinea pig	MODERN SPECIES	107	PRMT8 (ENSCPOG00000005780)	CRACR2A (ENSCPOG00000020119) #7	PARP11 (ENSCPOG00000009784) #8	CCND2 (ENSCPOG00000026573) #10	TIGAR (ENSCPOG00000009667) #11	FGF23 (ENSCPOG00000005702) #12	FGF6 (ENSCPOG00000037696) #13	C12orf4 (ENSCPOG00000008414) #14	RAD51AP1 (ENSCPOG00000035787) #15	DYRK4 (ENSCPOG00000010199) #16	AKAP3 (ENSCPOG00000039169) #17	NDUFA9 (ENSCPOG00000010206) #18	GALNT8 (ENSCPOG00000004774) #19	KCNA6 (ENSCPOG00000003874)	KCNA1 (ENSCPOG00000004477) #20	KCNA5 (ENSCPOG00000004475) #22	NTF3 (ENSCPOG00000000269) #23	ANO2 (ENSCPOG00000000909) #24	VWF (ENSCPOG00000000912) #25	CD9 (ENSCPOG00000034556) #26	ENSCPOG00000033321	ENSCPOG00000036574	ENSCPOG00000022824
Naked mole-rat female	MODERN SPECIES	24	PARP11 (ENSHGLG00000048673) #8	ENSHGLG00000046994	ENSHGLG00000009299	CCND2 (ENSHGLG00000048836) #10	ENSHGLG00000044530 #11	FGF23 (ENSHGLG00000042157) #12	FGF6 (ENSHGLG00000005621) #13	C12orf4 (ENSHGLG00000000998) #14	RAD51AP1 (ENSHGLG00000001032) #15	ENSHGLG00000039729	AKAP3 (ENSHGLG00000001070) #17	NDUFA9 (ENSHGLG00000001093) #18	GALNT8 (ENSHGLG00000035987) #19	KCNA6 (ENSHGLG00000001123)	KCNA1 (ENSHGLG00000001140) #20	KCNA5 (ENSHGLG00000001161) #22	NTF3 (ENSHGLG00000001196) #23	ENSHGLG00000032394	VWF (ENSHGLG00000001451) #25	CD9 (ENSHGLG00000001625) #26	PLEKHG6 (ENSHGLG00000001657) #27	TNFRSF1A (ENSHGLG00000001689) #28	SCNN1A (ENSHGLG00000001735) #29	LTBR (ENSHGLG00000032405) #30	CD27 (ENSHGLG00000046681) #31	TAPBPL (ENSHGLG00000001831) #33	ENSHGLG00000001867 #34	MRPL51 (ENSHGLG00000050005) #36	NCAPD2 (ENSHGLG00000001934) #37	ENSHGLG00000036344	GAPDH (ENSHGLG00000002856)
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Afrotheria	ANCESTRAL SPECIES	11	ENSGT00940000155867	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Afrotheria_a	ANCESTRAL SPECIES	11	ENSGT00940000155867	ENSGT00940000164603	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.n	ENSGT00510000046803.b.b
Elephant	MODERN SPECIES	108	PRMT8 (ENSLAFG00000003611)	ENSLAFG00000016780	ENSLAFG00000016782 #7	PARP11 (ENSLAFG00000017489) #8	CCND2 (ENSLAFG00000016918) #10	TIGAR (ENSLAFG00000016921) #11	FGF23 (ENSLAFG00000016928) #12	FGF6 (ENSLAFG00000005560) #13	C12orf4 (ENSLAFG00000005564) #14	RAD51AP1 (ENSLAFG00000029897) #15	DYRK4 (ENSLAFG00000002370) #16	AKAP3 (ENSLAFG00000002371) #17	ENSLAFG00000021432 #18	GALNT8 (ENSLAFG00000002699) #19	KCNA1 (ENSLAFG00000013360) #20	KCNA5 (ENSLAFG00000007935) #22	ENSLAFG00000028245	NTF3 (ENSLAFG00000002319) #23	ANO2 (ENSLAFG00000002320) #24	VWF (ENSLAFG00000002327) #25	CD9 (ENSLAFG00000027050) #26	PLEKHG6 (ENSLAFG00000021440) #27	TNFRSF1A (ENSLAFG00000017153) #28	SCNN1A (ENSLAFG00000000723) #29	LTBR (ENSLAFG00000029559) #30	CD27 (ENSLAFG00000021608) #31	TAPBPL (ENSLAFG00000016109) #33	VAMP1 (ENSLAFG00000002104) #34	MRPL51 (ENSLAFG00000002106) #36	NCAPD2 (ENSLAFG00000016117) #37	ENSLAFG00000002780
Tenrec	MODERN SPECIES	17394																KCNA5 (ENSETEG00000000928) #22
Xenarthra	ANCESTRAL SPECIES	5	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000155180.b #10	ENSGT00390000013224 #11	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000153414.A #15	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000160453 #33	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a	ENSGT00510000046803.b.b	ENSGT00940000161554
Armadillo	MODERN SPECIES	1608	CRACR2A (ENSDNOG00000043722) #7	PARP11 (ENSDNOG00000012102) #8	ENSDNOG00000044735	CCND2 (ENSDNOG00000012523) #10	TIGAR (ENSDNOG00000032896) #11	FGF23 (ENSDNOG00000005810) #12	FGF6 (ENSDNOG00000015546) #13	C12orf4 (ENSDNOG00000015550) #14	ENSDNOG00000030923 #15	DYRK4 (ENSDNOG00000015557) #16	AKAP3 (ENSDNOG00000046997) #17	NDUFA9 (ENSDNOG00000015566) #18	GALNT8 (ENSDNOG00000037069) #19	KCNA6 (ENSDNOG00000048542)	KCNA1 (ENSDNOG00000035859) #20	KCNA5 (ENSDNOG00000012639) #22	NTF3 (ENSDNOG00000048552) #23	ENSDNOG00000039566 #25
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00390000009359.a	ENSGT01100000263564.b	ENSGT00940000161053	ENSGT00940000160313	ENSGT00670000098076	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731	ENSGT00940000161190	ENSGT00940000162534	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.g	ENSGT00940000153298.m.b.a.b	ENSGT00510000046803.b.b
Opossum	MODERN SPECIES	7	FOXJ2 (ENSMODG00000017974)	ENSMODG00000017976	ENSMODG00000037935	ENSMODG00000017979	A2M (ENSMODG00000017988)	M6PR (ENSMODG00000017991)	PHC1 (ENSMODG00000017995)	RIMKLB (ENSMODG00000017997)	MFAP5 (ENSMODG00000044262)	AICDA (ENSMODG00000018002)	APOBEC1 (ENSMODG00000018004)	GDF3 (ENSMODG00000018006)	KCNA6 (ENSMODG00000018007)	ENSMODG00000028583	KCNA1 (ENSMODG00000024850) #20	KCNA5 (ENSMODG00000024849) #22	NTF3 (ENSMODG00000018011) #23	ANO2 (ENSMODG00000018017) #24	ENSMODG00000018053 #26	PLEKHG6 (ENSMODG00000018054) #27	ENSMODG00000018056 #28	ENSMODG00000037213 #29	ENSMODG00000048629 #29	LTBR (ENSMODG00000018059) #30	ENSMODG00000018060 #31	MRPL51 (ENSMODG00000018063) #36	NCAPD2 (ENSMODG00000018064) #37	ENSMODG00000018066	ENSMODG00000018067	NOP2 (ENSMODG00000018077)	CHD4 (ENSMODG00000018094)
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00390000009359.a	ENSGT01100000263564.b	ENSGT00940000161053	ENSGT00940000160313	ENSGT00670000098076.h	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731	ENSGT00940000161190	ENSGT00940000162534	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.g	ENSGT00940000153298.m.b.a.b	ENSGT00510000046803.b.b
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00390000009359.a	ENSGT01100000263564.b	ENSGT00940000161053	ENSGT00940000160313	ENSGT00670000098076.h	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731	ENSGT00940000161190	ENSGT00940000162534	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.g	ENSGT00510000046803.b.b	ENSGT00940000161554
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00390000009359.a	ENSGT01100000263564.b	ENSGT00940000161053	ENSGT00940000160313	ENSGT00670000098076.h	ENSGT00940000154904.b	ENSGT00390000002109	ENSGT00940000156612	ENSGT00390000014577.a	ENSGT00390000017736.a	ENSGT00940000158731	ENSGT00940000161190	ENSGT00940000162534	ENSGT00940000162469	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b.e #26	ENSGT00940000161250 #27	ENSGT00940000159540 #28	ENSGT00940000160952 #29	ENSGT00940000162178 #30	ENSGT00510000049297 #31	ENSGT00940000161390 #34	ENSGT00390000018821 #36	ENSGT00940000153566.a #37	ENSGT00940000153298.m.b.a.a.g	ENSGT00510000046803.b.b	ENSGT00940000161554
Common wonbat	MODERN SPECIES	1064	NECAP1 (ENSVURG00010017533)	C3AR1 (ENSVURG00010017541)	FOXJ2 (ENSVURG00010017548)	ENSVURG00010017564	A2M (ENSVURG00010017581)	M6PR (ENSVURG00010017636)	PHC1 (ENSVURG00010017650)	RIMKLB (ENSVURG00010017669)	MFAP5 (ENSVURG00010017680)	ENSVURG00010017693	AICDA (ENSVURG00010017700)	APOBEC1 (ENSVURG00010017711)	GDF3 (ENSVURG00010017714)	KCNA6 (ENSVURG00010017719)	KCNA1 (ENSVURG00010017720) #20	KCNA5 (ENSVURG00010017725) #22	NTF3 (ENSVURG00010017728) #23	ANO2 (ENSVURG00010017773) #24	VWF (ENSVURG00010018274) #25	ENSVURG00010018317 #26	PLEKHG6 (ENSVURG00010018342) #27	ENSVURG00010018384 #28	SCNN1A (ENSVURG00010018396) #29	LTBR (ENSVURG00010018412) #30	ENSVURG00010018428 #31	VAMP1 (ENSVURG00010018444) #34
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000017050	C3AR1 (ENSSHAG00000022696)	ENSSHAG00000017137	ENSSHAG00000030656	ENSSHAG00000024061	ENSSHAG00000002556	M6PR (ENSSHAG00000005206)	PHC1 (ENSSHAG00000005292)	RIMKLB (ENSSHAG00000023940)	ENSSHAG00000028416	ENSSHAG00000008694	ENSSHAG00000008925	ENSSHAG00000026667	ENSSHAG00000027811	KCNA1 (ENSSHAG00000031762) #20	KCNA5 (ENSSHAG00000011548) #22	NTF3 (ENSSHAG00000006721) #23	ANO2 (ENSSHAG00000030277) #24	ENSSHAG00000026710	VWF (ENSSHAG00000012094) #25	CD9 (ENSSHAG00000013749) #26	PLEKHG6 (ENSSHAG00000014065) #27	SCNN1A (ENSSHAG00000014354) #29	LTBR (ENSSHAG00000028116) #30	ENSSHAG00000014740 #31	ENSSHAG00000029190 #36	NCAPD2 (ENSSHAG00000014814) #37	ENSSHAG00000014953	IFFO1 (ENSSHAG00000027937)	ENSSHAG00000031410	ENSSHAG00000015079
Platypus	MODERN SPECIES	87	PRMT8 (ENSOANG00000005194)	CRACR2A (ENSOANG00000002166) #7	PARP11 (ENSOANG00000050791) #8	CCND2 (ENSOANG00000014696) #10	ENSOANG00000043479	ENSOANG00000014697 #11	ENSOANG00000051292 #12	FGF6 (ENSOANG00000020755) #13	C12orf4 (ENSOANG00000039330) #14	ENSOANG00000011973 #15	ENSOANG00000002548 #16	AKAP3 (ENSOANG00000042546) #17	NDUFA9 (ENSOANG00000015719) #18	KCNA6 (ENSOANG00000014376)	KCNA1 (ENSOANG00000008085) #20	KCNA5 (ENSOANG00000044609) #22	NTF3 (ENSOANG00000001146) #23	ANO2 (ENSOANG00000036505) #24	VWF (ENSOANG00000040443) #25	GAPDH (ENSOANG00000004492)	CD9 (ENSOANG00000048710) #26	ENSOANG00000038811 #27	ENSOANG00000044825 #28	SCNN1A (ENSOANG00000001688) #29	ENSOANG00000039739 #30	ENSOANG00000007602 #33	ENSOANG00000038559 #34	MRPL51 (ENSOANG00000003012) #36	NCAPD2 (ENSOANG00000003013) #37	ENSOANG00000043432	NOP2 (ENSOANG00000047605)
Sauria	ANCESTRAL SPECIES	4		ENSGT00940000166363	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00940000159918.b
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000165559	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01100000263521.a.a.b.a.b.b.a.b	ENSGT00390000017365.b.k.b.b.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000165559	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000156857 #8	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00960000190536	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00950000185578	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01100000263521.a.a.b.a.b.b.a.b	ENSGT00960000192206	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000165559	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443
Emydidae	ANCESTRAL SPECIES	5	ENSGT00940000156857 #8	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00960000190536	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00950000185578	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000154488.A.a.a.h	ENSGT00960000192206	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000165559	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443
painted turtle	MODERN SPECIES	2435	C14orf132 (ENSCPBG00000024110)	BDKRB2 (ENSCPBG00000024113)	ATG2B (ENSCPBG00000024115)	GSKIP (ENSCPBG00000024118)	AK7 (ENSCPBG00000024122)	PAPOLA (ENSCPBG00000024125)	ENSCPBG00000024126	VRK1 (ENSCPBG00000024132)	AKAP3 (ENSCPBG00000024149) #17	NDUFA9 (ENSCPBG00000024156) #18	GALNT8 (ENSCPBG00000024161) #19	ENSCPBG00000024177	ENSCPBG00000024180	KCNA1 (ENSCPBG00000024185) #20	ENSCPBG00000024188 #21	KCNA5 (ENSCPBG00000024190) #22
Three-toed box turtle	MODERN SPECIES	49	CRACR2A (ENSTMTG00000014820) #7	PARP11 (ENSTMTG00000014778) #8	DYRK4 (ENSTMTG00000014748) #16	RAD51AP1 (ENSTMTG00000014723) #15	C12orf4 (ENSTMTG00000014699) #14	FGF6 (ENSTMTG00000014656) #13	FGF23 (ENSTMTG00000014642) #12	ENSTMTG00000014631	CCND2 (ENSTMTG00000014617) #10	AKAP3 (ENSTMTG00000014571) #17	NDUFA9 (ENSTMTG00000014542) #18	GALNT8 (ENSTMTG00000014414) #19	ENSTMTG00000014357	KCNA1 (ENSTMTG00000023124) #20	ENSTMTG00000023123 #21	KCNA5 (ENSTMTG00000023122) #22	NTF3 (ENSTMTG00000023121) #23	ENSTMTG00000023120	ENSTMTG00000023119 #24	ENSTMTG00000023118 #24	VWF (ENSTMTG00000023093) #25	CD9 (ENSTMTG00000022985) #26	ENSTMTG00000022980	ENSTMTG00000022965	ENSTMTG00000022961	ENSTMTG00000022958	ENSTMTG00000022957	ENSTMTG00000022956	FAR2 (ENSTMTG00000022953)	ENSTMTG00000022949	ENSTMTG00000022947
Testudinidae	ANCESTRAL SPECIES	105														ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00950000185578	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01100000263521.a.a.b.a.b.b.a.b
Abingdon island giant tortoise	MODERN SPECIES	2381										ENSCABG00000006118	CTTNBP2NL (ENSCABG00000006119)	ENSCABG00000006121	ENSCABG00000006122	KCNA1 (ENSCABG00000006123) #20	ENSCABG00000006125 #21	KCNA5 (ENSCABG00000006126) #22	NTF3 (ENSCABG00000006127) #23
Goode s thornscrub tortoise	MODERN SPECIES		FGF6 (ENSGEVG00005002676) #13	FGF23 (ENSGEVG00005002698) #12	ENSGEVG00005002714	CCND2 (ENSGEVG00005002727) #10	AKAP3 (ENSGEVG00005002790) #17	NDUFA9 (ENSGEVG00005002814) #18	GALNT8 (ENSGEVG00005002848) #19	ENSGEVG00005002904	ENSGEVG00005002919	ENSGEVG00005002931	ENSGEVG00005002942	ENSGEVG00005003007	ENSGEVG00005003017	KCNA1 (ENSGEVG00005003028) #20	ENSGEVG00005003040	KCNA5 (ENSGEVG00005003052) #22	NTF3 (ENSGEVG00005003068) #23	ANO2 (ENSGEVG00005003079) #24	ENSGEVG00005003104	VWF (ENSGEVG00005003161) #25	CD9 (ENSGEVG00005003318) #26	ENSGEVG00005003332	ENSGEVG00005003353	ENSGEVG00005003380	ENSGEVG00005003386	ENSGEVG00005003391	ENSGEVG00005003424	FAR2 (ENSGEVG00005003526)	ENSGEVG00005003543	CCDC91 (ENSGEVG00005003551)	PTHLH (ENSGEVG00005003600)
Chinese turtle	MODERN SPECIES	1447																KCNA5 (ENSPSIG00000000243) #22	NTF3 (ENSPSIG00000002832) #23	ENSPSIG00000002833 #24	VWF (ENSPSIG00000002839) #25	CD9 (ENSPSIG00000002893) #26	ENSPSIG00000002905	ENSPSIG00000002909	ENSPSIG00000000254
Archosauria	ANCESTRAL SPECIES	4	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000165559	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852
Australian saltwater crocodile	MODERN SPECIES	49	TSPAN11 (ENSCPRG00005013265)	PRMT8 (ENSCPRG00005013271)	CRACR2A (ENSCPRG00005013286) #7	PARP11 (ENSCPRG00005013301) #8	DYRK4 (ENSCPRG00005013305) #16	RAD51AP1 (ENSCPRG00005013324) #15	C12orf4 (ENSCPRG00005013332) #14	FGF6 (ENSCPRG00005013336) #13	FGF23 (ENSCPRG00005013337) #12	ENSCPRG00005013339	CCND2 (ENSCPRG00005013348) #10	AKAP3 (ENSCPRG00005013361) #17	NDUFA9 (ENSCPRG00005013363) #18	ENSCPRG00005013370	KCNA1 (ENSCPRG00005013371) #20	KCNA5 (ENSCPRG00005000141) #22	NTF3 (ENSCPRG00005000235) #23	ANO2 (ENSCPRG00005000287) #24	VWF (ENSCPRG00005000383) #25	CD9 (ENSCPRG00005000601) #26	ENSCPRG00005000677	ENSCPRG00005000694	ENSCPRG00005000703	ENSCPRG00005000705	FAR2 (ENSCPRG00005000797)	CCDC91 (ENSCPRG00005001261)	PTHLH (ENSCPRG00005001274)	ENSCPRG00005001302	KLHL42 (ENSCPRG00005001305)	MANSC4 (ENSCPRG00005001309)	MRPS35 (ENSCPRG00005001312)
Aves	ANCESTRAL SPECIES	1	ENSGT00940000155319.h.c.b	ENSGT00960000189377	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00940000159918.b
African ostrich	MODERN SPECIES	628	ENSSCUG00000008535	ENSSCUG00000008539	ENSSCUG00000008540 #16	RAD51AP1 (ENSSCUG00000008542) #15	C12orf4 (ENSSCUG00000008546) #14	FGF6 (ENSSCUG00000008549) #13	FGF23 (ENSSCUG00000008551) #12	TIGAR (ENSSCUG00000008553) #11	CCND2 (ENSSCUG00000008557) #10	AKAP3 (ENSSCUG00000008560) #17	NDUFA9 (ENSSCUG00000008561) #18	GALNT8 (ENSSCUG00000008562) #19	ENSSCUG00000008563	KCNA1 (ENSSCUG00000008567) #20	ENSSCUG00000008568 #21	KCNA5 (ENSSCUG00000008569) #22	NTF3 (ENSSCUG00000008572) #23	ANO2 (ENSSCUG00000008577) #24	VWF (ENSSCUG00000008589) #25	CD9 (ENSSCUG00000008599) #26	ENSSCUG00000008603	ENSSCUG00000008604	ENSSCUG00000008606	ENSSCUG00000008608	FAR2 (ENSSCUG00000008609)
Neognathae	ANCESTRAL SPECIES	3					ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00940000159918.b
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000155319.h.c.b	ENSGT00960000189377	ENSGT00530000063085.A.a	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00960000187403
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00390000013715	ENSGT00390000012980.a	ENSGT00390000006760	ENSGT00940000153185.a.a.a	ENSGT00390000007681.b.a.b	ENSGT00940000158662	ENSGT00940000155662	ENSGT00390000011355	ENSGT00950000183194.a.a	ENSGT00950000183194.b	ENSGT00390000006791	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01100000263521.a.a.b.a.b.a.a.b.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852
Great tit	MODERN SPECIES	10	YBX3 (ENSPMJG00000009615)	SYCE3 (ENSPMJG00000009616)	STYK1 (ENSPMJG00000009617)	GABARAPL1 (ENSPMJG00000009618)	SULT4A1 (ENSPMJG00000009635)	PNPLA3 (ENSPMJG00000009640)	SAMM50 (ENSPMJG00000009643)	PARVB (ENSPMJG00000009649)	PARVG (ENSPMJG00000009653)	ENSPMJG00000009654	SHISAL1 (ENSPMJG00000009675)	NDUFA9 (ENSPMJG00000009677) #18	ENSPMJG00000009679	KCNA1 (ENSPMJG00000009689) #20	ENSPMJG00000009694 #21	KCNA5 (ENSPMJG00000009700) #22	NTF3 (ENSPMJG00000009723) #23	ANO2 (ENSPMJG00000009796) #24	VWF (ENSPMJG00000010039) #25	CD9 (ENSPMJG00000010044) #26	ENSPMJG00000010052	ENSPMJG00000010053	ENSPMJG00000010068	FAR2 (ENSPMJG00000010069)	PHF21B (ENSPMJG00000010086)	PRR5 (ENSPMJG00000010121)	ST8SIA1 (ENSPMJG00000010134)	C2CD5 (ENSPMJG00000010135)	ETNK1 (ENSPMJG00000010144)	SOX5 (ENSPMJG00000010217)	BCAT1 (ENSPMJG00000010251)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00390000013715	ENSGT00390000012980.a	ENSGT00390000006760	ENSGT00940000153185.a.a.a	ENSGT00390000007681.b.a.b	ENSGT00940000158662	ENSGT00940000155662	ENSGT00390000011355	ENSGT00950000183194.a.a	ENSGT00950000183194.b	ENSGT00390000006791	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01100000263521.a.a.b.a.b.a.a.b.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852
Flycatcher	MODERN SPECIES	10	PTHLH (ENSFALG00000004620)	CCDC91 (ENSFALG00000004618)	ENSFALG00000028394	FAR2 (ENSFALG00000027573)	ENSFALG00000028752	ENSFALG00000004577	ENSFALG00000024370	CD9 (ENSFALG00000023459) #26	ENSFALG00000004539 #25	ENSFALG00000025778 #24	ENSFALG00000001073	ENSFALG00000001080 #18	ENSFALG00000023929	ENSFALG00000001089	ENSFALG00000022706 #21	KCNA5 (ENSFALG00000006589) #22	ENSFALG00000024840	KCNA1 (ENSFALG00000014875) #20	NTF3 (ENSFALG00000006590) #23	ENSFALG00000006591 #24	PARVG (ENSFALG00000006613)	PARVB (ENSFALG00000026291)	SAMM50 (ENSFALG00000006621)	PNPLA3 (ENSFALG00000006626)	SULT4A1 (ENSFALG00000006642)	MPPED1 (ENSFALG00000026432)	SCUBE1 (ENSFALG00000006655)	TTLL12 (ENSFALG00000006664)	TSPO (ENSFALG00000023447)	ENSFALG00000027054	TTLL1 (ENSFALG00000006685)
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00390000013715	ENSGT00390000012980.a	ENSGT00390000006760	ENSGT00940000153185.a.a.a	ENSGT00390000007681.b.a.b	ENSGT00940000158662	ENSGT00940000155662	ENSGT00390000011355	ENSGT00950000183194.a.a	ENSGT00950000183194.b	ENSGT00390000006791	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c
Medium ground finch	MODERN SPECIES	129	MCAT (ENSGFOG00000013589)	TSPO (ENSGFOG00000013587)	TTLL12 (ENSGFOG00000013582)	SCUBE1 (ENSGFOG00000013503)	MPPED1 (ENSGFOG00000013486)	SULT4A1 (ENSGFOG00000013483)	PNPLA3 (ENSGFOG00000013481)	SAMM50 (ENSGFOG00000013472)	PARVB (ENSGFOG00000013464)	PARVG (ENSGFOG00000013447)	SHISAL1 (ENSGFOG00000013442)	NDUFA9 (ENSGFOG00000013404) #18	ENSGFOG00000013397	KCNA1 (ENSGFOG00000013396) #20	ENSGFOG00000013364 #21	KCNA5 (ENSGFOG00000013359) #22	NTF3 (ENSGFOG00000013356) #23	ANO2 (ENSGFOG00000013341) #24	VWF (ENSGFOG00000012758) #25	CD9 (ENSGFOG00000012663) #26	ENSGFOG00000012659	ENSGFOG00000012657	FAR2 (ENSGFOG00000012650)
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00390000013715	ENSGT00390000012980.a	ENSGT00390000006760	ENSGT00940000153185.a.a.a	ENSGT00390000007681.b.a.b	ENSGT00940000158662	ENSGT00940000155662	ENSGT00390000011355	ENSGT00950000183194.a.a	ENSGT00950000183194.b	ENSGT00390000006791	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c
Zebra finch	MODERN SPECIES	11	TTLL1 (ENSTGUG00000012037)	ENSTGUG00000022797	MCAT (ENSTGUG00000021072)	TSPO (ENSTGUG00000012033)	TTLL12 (ENSTGUG00000012025)	SCUBE1 (ENSTGUG00000012016)	MPPED1 (ENSTGUG00000012007)	SULT4A1 (ENSTGUG00000012001)	PNPLA3 (ENSTGUG00000011999)	SAMM50 (ENSTGUG00000011988)	PARVB (ENSTGUG00000011982)	PARVG (ENSTGUG00000011975)	SHISAL1 (ENSTGUG00000020274)	NDUFA9 (ENSTGUG00000028710) #18	KCNA1 (ENSTGUG00000024687) #20	KCNA5 (ENSTGUG00000018536) #22	NTF3 (ENSTGUG00000011951) #23	ANO2 (ENSTGUG00000011938) #24	VWF (ENSTGUG00000011914) #25	CD9 (ENSTGUG00000011899) #26	ENSTGUG00000027486	ENSTGUG00000011885	FAR2 (ENSTGUG00000011875)	PHF21B (ENSTGUG00000011870)	NUP50 (ENSTGUG00000011865)	KIAA0930 (ENSTGUG00000011858)	FAM118A (ENSTGUG00000011851)	SMC1B (ENSTGUG00000011831)	RIBC2 (ENSTGUG00000011828)	FBLN1 (ENSTGUG00000011821)	ATXN10 (ENSTGUG00000011811)
Common canary	MODERN SPECIES	26	TSPO (ENSSCAG00000008659)	TTLL12 (ENSSCAG00000008561)	SCUBE1 (ENSSCAG00000008411)	MPPED1 (ENSSCAG00000008345)	SULT4A1 (ENSSCAG00000008339)	PNPLA3 (ENSSCAG00000008335)	SAMM50 (ENSSCAG00000008323)	PARVB (ENSSCAG00000008303)	PARVG (ENSSCAG00000008275)	ENSSCAG00000008263	SHISAL1 (ENSSCAG00000008255)	NDUFA9 (ENSSCAG00000008239) #18	ENSSCAG00000008234	KCNA1 (ENSSCAG00000008228) #20	ENSSCAG00000008223 #21	KCNA5 (ENSSCAG00000008219) #22	NTF3 (ENSSCAG00000008216) #23	ENSSCAG00000008210 #24	ENSSCAG00000008203 #24	VWF (ENSSCAG00000007477) #25	CD9 (ENSSCAG00000007283) #26	ENSSCAG00000007234	FAR2 (ENSSCAG00000007190)
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000155319.h.c.b	ENSGT00960000189377	ENSGT00530000063085.A.a	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01100000263521.a.a.b.a.b.b.a.b	ENSGT01100000263521.a.a.b.a.b.a.a.b.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088
Golden eagle	MODERN SPECIES	8	ENSACCG00020007526	DYRK4 (ENSACCG00020007540) #16	RAD51AP1 (ENSACCG00020007559) #15	ENSACCG00020007571	C12orf4 (ENSACCG00020007582) #14	ENSACCG00020007601 #13	ENSACCG00020007604 #13	FGF23 (ENSACCG00020007613) #12	ENSACCG00020007626	CCND2 (ENSACCG00020007642) #10	NDUFA9 (ENSACCG00020007660) #18	GALNT8 (ENSACCG00020007696) #19	ENSACCG00020007726	KCNA1 (ENSACCG00020007733) #20	ENSACCG00020007771 #21	KCNA5 (ENSACCG00020007803) #22	NTF3 (ENSACCG00020007808) #23	ENSACCG00020007821 #24	ENSACCG00020007844 #24	VWF (ENSACCG00020007873) #25	CD9 (ENSACCG00020007926) #26	ENSACCG00020007946	ENSACCG00020007968	ENSACCG00020007980	ENSACCG00020007986	FAR2 (ENSACCG00020007998)	CCDC91 (ENSACCG00020008011)	PTHLH (ENSACCG00020008022)	KLHL42 (ENSACCG00020008025)	MANSC4 (ENSACCG00020008035)	MRPS35 (ENSACCG00020008045)
Kakapo	MODERN SPECIES	20	TMEM140 (ENSSHBG00005014987)	AGBL3 (ENSSHBG00005014994)	ENSSHBG00005015009	ENSSHBG00005015056	ENSSHBG00005015068	DYRK4 (ENSSHBG00005015088) #16	RAD51AP1 (ENSSHBG00005015102) #15	C12orf4 (ENSSHBG00005015107) #14	FGF6 (ENSSHBG00005015116) #13	FGF23 (ENSSHBG00005015120) #12	ENSSHBG00005015128	CCND2 (ENSSHBG00005015136) #10	NDUFA9 (ENSSHBG00005015148) #18	GALNT8 (ENSSHBG00005015163) #19	KCNA1 (ENSSHBG00005015197) #20	KCNA5 (ENSSHBG00005015216) #22	ENSSHBG00005015224	NTF3 (ENSSHBG00005015226) #23	ANO2 (ENSSHBG00005015238) #24	ENSSHBG00005015256	VWF (ENSSHBG00005000215) #25	CD9 (ENSSHBG00005000241) #26	ENSSHBG00005000251	ENSSHBG00005000262	ENSSHBG00005000268	ENSSHBG00005000271	FAR2 (ENSSHBG00005000274)	CCDC91 (ENSSHBG00005005504)	PTHLH (ENSSHBG00005005540)	KLHL42 (ENSSHBG00005005558)	MANSC4 (ENSSHBG00005005573)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000155319.h.c.b	ENSGT00960000189377	ENSGT00530000063085.A.a	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00940000159918.b
Anatidae	ANCESTRAL SPECIES	8	ENSGT00940000155319.h.c.b	ENSGT00960000189377	ENSGT00530000063085.A.a	ENSGT00940000159401 #16	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT01050000244838.B #21	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT01080000257336.b.e.b.a.b.a.k	ENSGT01080000257336.b.e.b.a.b.a.l	ENSGT01080000257336.b.e.b.a.b.b	ENSGT00510000048671	ENSGT00390000014894	ENSGT00940000157013	ENSGT00390000014507.a	ENSGT00390000009532.A.d.a	ENSGT00940000156122
Pink-footed goose	MODERN SPECIES	142	ENSABRG00000009802	DYRK4 (ENSABRG00000009762) #16	RAD51AP1 (ENSABRG00000009739) #15	C12orf4 (ENSABRG00000009697) #14	FGF6 (ENSABRG00000009688) #13	FGF23 (ENSABRG00000009686) #12	ENSABRG00000009681	CCND2 (ENSABRG00000009674) #10	NDUFA9 (ENSABRG00000009639) #18	GALNT8 (ENSABRG00000009366) #19	ENSABRG00000009333	ENSABRG00000009331	KCNA1 (ENSABRG00000009316) #20	ENSABRG00000009288	ENSABRG00000009270 #21	KCNA5 (ENSABRG00000009255) #22	USP25 (ENSABRG00000009179)	CXADR (ENSABRG00000009085)	C21orf91 (ENSABRG00000009076)	CHODL (ENSABRG00000009055)
Duck	MODERN SPECIES		ENSAPLG00000003141	ENSAPLG00000019568	ENSAPLG00000016690	ENSAPLG00000003116	DYRK4 (ENSAPLG00000003105) #16	RAD51AP1 (ENSAPLG00000003097) #15	C12orf4 (ENSAPLG00000003055) #14	FGF6 (ENSAPLG00000003052) #13	FGF23 (ENSAPLG00000003044) #12	ENSAPLG00000003024	CCND2 (ENSAPLG00000003009) #10	GALNT8 (ENSAPLG00000002946) #19	ENSAPLG00000017001	KCNA1 (ENSAPLG00000001218) #20	ENSAPLG00000002935 #21	KCNA5 (ENSAPLG00000002934) #22	NTF3 (ENSAPLG00000001212) #23	ENSAPLG00000002928 #24	ENSAPLG00000017977 #24	VWF (ENSAPLG00000002805) #25	CD9 (ENSAPLG00000002647) #26	ENSAPLG00000002594	ENSAPLG00000020640	ENSAPLG00000004518	ENSAPLG00000004396	SLCO1A2 (ENSAPLG00000003909)	IAPP (ENSAPLG00000003888)	PYROXD1 (ENSAPLG00000003575)	RECQL (ENSAPLG00000003404)	GOLT1B (ENSAPLG00000003388)	BCAT1 (ENSAPLG00000003259)
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000003443	ENSGT00940000153377.C	ENSGT00940000160124	ENSGT00390000004933	ENSGT00390000015899	ENSGT00390000006367.c	ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00940000155180.b #10	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810.a #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000155867	ENSGT00940000156857 #8	ENSGT00940000158225	ENSGT00950000182956.b.b.a.b	ENSGT00940000158155	ENSGT00390000003219	ENSGT00940000158804	ENSGT00390000005378	ENSGT00940000157200
Japanese quail	MODERN SPECIES		CDKN1B (ENSCJPG00005016207)	MRPS35 (ENSCJPG00005016212)	MANSC4 (ENSCJPG00005016213)	KLHL42 (ENSCJPG00005016214)	PTHLH (ENSCJPG00005016218)	CCDC91 (ENSCJPG00005016219)	FAR2 (ENSCJPG00005016220)	RAD51AP1 (ENSCJPG00005016221) #15	C12orf4 (ENSCJPG00005016222) #14	FGF23 (ENSCJPG00005016223) #12	ENSCJPG00005016224	CCND2 (ENSCJPG00005016226) #10	NDUFA9 (ENSCJPG00005016229) #18	ENSCJPG00005016231	KCNA1 (ENSCJPG00005016243) #20	KCNA5 (ENSCJPG00005016244) #22	NTF3 (ENSCJPG00005016264) #23	ANO2 (ENSCJPG00005016266) #24	VWF (ENSCJPG00005016468) #25	CD9 (ENSCJPG00005016609) #26	ENSCJPG00005016610	PRMT8 (ENSCJPG00005016615)	PARP11 (ENSCJPG00005016616) #8	TSPAN9 (ENSCJPG00005016617)	TEAD4 (ENSCJPG00005016618)	TULP3 (ENSCJPG00005016619)	RHNO1 (ENSCJPG00005016620)	FOXM1 (ENSCJPG00005016622)	ITFG2 (ENSCJPG00005016633)	FKBP4 (ENSCJPG00005016644)	NECAP1 (ENSCJPG00005016645)
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Turkey	MODERN SPECIES		ENSMGAG00000013870	ENSMGAG00000013873	FGF6 (ENSMGAG00000013880) #13	ENSMGAG00000013879 #14	RAD51AP1 (ENSMGAG00000022380) #15	ENSMGAG00000020806	FBLN1 (ENSMGAG00000013829)	ENSMGAG00000022261	ENSMGAG00000013828	ENSMGAG00000013821	ENSMGAG00000013817	ENSMGAG00000020922	ENSMGAG00000013814	ENSMGAG00000013811	ENSMGAG00000019552	ENSMGAG00000016008 #22	ENSMGAG00000013892 #20	ENSMGAG00000016019	ENSMGAG00000013889 #18	ENSMGAG00000013885 #10	ENSMGAG00000020167 #10	ENSMGAG00000013883	ENSMGAG00000013881 #12	TXNDC9 (ENSMGAG00000014790)	ENSMGAG00000018662	ENSMGAG00000014788	ENSMGAG00000014787	ENSMGAG00000021434	MITD1 (ENSMGAG00000014785)	LIPT1 (ENSMGAG00000015493)	ENSMGAG00000014792
Lepidosauria	ANCESTRAL SPECIES	45			ENSGT00940000153414.A #15	ENSGT00390000010229 #14	ENSGT00940000157821 #13	ENSGT00940000160821 #12	ENSGT00940000163946	ENSGT00390000013224 #11	ENSGT00940000155180.b #10	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00940000159918.b
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000158155	ENSGT00940000158225	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C.p #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00960000187403
Laterata	ANCESTRAL SPECIES	21	ENSGT00390000003219	ENSGT00940000158155	ENSGT00940000158225	ENSGT00940000155867	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C.p #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a
Common wall lizard	MODERN SPECIES	13	GPALPP1 (ENSPMRG00000003648)	NUFIP1 (ENSPMRG00000003640)	ENSPMRG00000003638	CRACR2A (ENSPMRG00000003617) #7	PARP11 (ENSPMRG00000003602) #8	ENSPMRG00000003595	FGF23 (ENSPMRG00000003592) #12	FGF6 (ENSPMRG00000003587) #13	C12orf4 (ENSPMRG00000003578) #14	ENSPMRG00000003574	DYRK4 (ENSPMRG00000003565) #16	AKAP3 (ENSPMRG00000003560) #17	NDUFA9 (ENSPMRG00000003552) #18	ENSPMRG00000003544	KCNA1 (ENSPMRG00000003540) #20	KCNA5 (ENSPMRG00000003528) #22	NTF3 (ENSPMRG00000003518) #23	ANO2 (ENSPMRG00000002983) #24	VWF (ENSPMRG00000001324) #25	CD9 (ENSPMRG00000000411) #26	ENSPMRG00000000293	ENSPMRG00000000243	ENSPMRG00000002159	SEMA3D (ENSPMRG00000002148)	SEMA3A (ENSPMRG00000002120)	SEMA3E (ENSPMRG00000002102)	PCLO (ENSPMRG00000002083)	ENSPMRG00000002073	A4GALT (ENSPMRG00000002069)	ARFGAP3 (ENSPMRG00000002046)	PACSIN2 (ENSPMRG00000002017)
Argentine black and white tegu	MODERN SPECIES	5	ENSSMRG00000017062	ENSSMRG00000017063	ENSSMRG00000017064	ENSSMRG00000017067	ENSSMRG00000017084	CDC25A (ENSSMRG00000017116)	BPNT2 (ENSSMRG00000017119)	GALNT4 (ENSSMRG00000017122)	ENSSMRG00000017128	SDHAF4 (ENSSMRG00000017131)	NDUFA4 (ENSSMRG00000017133)	ADIPOR1 (ENSSMRG00000017136)	BCDIN3D (ENSSMRG00000017138)	ENSSMRG00000017140	SNRNP48 (ENSSMRG00000017177)	KCNA5 (ENSSMRG00000017181) #22	GHITM (ENSSMRG00000017189)	ENSSMRG00000017190	TBRG4 (ENSSMRG00000017193)	ENSSMRG00000017194	CCM2 (ENSSMRG00000017195)	ENSSMRG00000017198	ENSSMRG00000017213	ENSSMRG00000017216	PTPN23 (ENSSMRG00000017218)	SCAP (ENSSMRG00000017220)	ELP6 (ENSSMRG00000017223)	CSPG5 (ENSSMRG00000017226)	SMARCC1 (ENSSMRG00000017236)	DHX30 (ENSSMRG00000017243)	ENSSMRG00000017245
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00940000158804	ENSGT00940000158155	ENSGT00940000155867	ENSGT00940000158225	ENSGT00440000033504.B #7	ENSGT00940000156857 #8	ENSGT00940000163946	ENSGT00940000160821 #12	ENSGT00940000157821 #13	ENSGT00390000010229 #14	ENSGT00940000159401 #16	ENSGT00940000153313.C.b #17	ENSGT00390000006865 #18	ENSGT00940000160161 #19	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C.p #24	ENSGT00940000155810 #25	ENSGT00940000155083.b #26	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a.a	ENSGT00390000006367.c	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00960000187403
Lizard	MODERN SPECIES	4	ENSACAG00000045349	NTF3 (ENSACAG00000009280) #23	ENSACAG00000009284	ENSACAG00000009352	CRACR2A (ENSACAG00000009432) #7	PARP11 (ENSACAG00000009439) #8	ENSACAG00000042667	FGF23 (ENSACAG00000009467) #12	FGF6 (ENSACAG00000038407) #13	C12orf4 (ENSACAG00000009479) #14	ENSACAG00000036035	AKAP3 (ENSACAG00000009585) #17	ENSACAG00000009588 #18	ENSACAG00000043222	KCNA1 (ENSACAG00000015431) #20	KCNA5 (ENSACAG00000015427) #22	ENSACAG00000044451	FOXM1 (ENSACAG00000015333)	ITFG2 (ENSACAG00000015272)	FKBP4 (ENSACAG00000015240)	ENSACAG00000037352	CRMP1 (ENSACAG00000015019)	JAKMIP1 (ENSACAG00000014944)	WFS1 (ENSACAG00000005077)	ppp2r2c (ENSACAG00000041673)	SH3BP2 (ENSACAG00000005190)	ADD1 (ENSACAG00000005207)	ENSACAG00000005264	NOP14 (ENSACAG00000005288)	HTT (ENSACAG00000005400)	MED28 (ENSACAG00000011107)
Elapidae	ANCESTRAL SPECIES	6	ENSGT00940000157946	ENSGT00530000063534.a	ENSGT00390000012875.bb	ENSGT00940000160161 #19	ENSGT00390000006865 #18	ENSGT00940000153313.C.b #17	ENSGT00940000159401 #16	ENSGT00940000160821.i #12	ENSGT00940000163946	ENSGT00440000033504.B #7	ENSGT00940000158225	ENSGT00940000155867	ENSGT00940000158804	ENSGT00390000006066	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C.p #24	ENSGT00940000155810.d #25	ENSGT00940000155083.b #26	ENSGT01030000234571.b.b.b.a.a.a	ENSGT00390000006367.c.e.b.b	ENSGT00390000006367.c.f	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852	ENSGT00960000187403
Indian cobra	MODERN SPECIES	10	LRRC17 (ENSNNAG00000012845)	FAM185A (ENSNNAG00000012874)	FGL2 (ENSNNAG00000013049)	GALNT8 (ENSNNAG00000013065) #19	NDUFA9 (ENSNNAG00000013118) #18	AKAP3 (ENSNNAG00000013173) #17	DYRK4 (ENSNNAG00000013191) #16	FGF23 (ENSNNAG00000013231) #12	ENSNNAG00000013265	CRACR2A (ENSNNAG00000013287) #7	TSPAN9 (ENSNNAG00000013347)	PRMT8 (ENSNNAG00000013428)	ENSNNAG00000013451	TEX52 (ENSNNAG00000013489)	KCNA1 (ENSNNAG00000013502) #20	KCNA5 (ENSNNAG00000013514) #22	NTF3 (ENSNNAG00000013519) #23	ENSNNAG00000013540 #24	ENSNNAG00000013619 #24	ENSNNAG00000013643 #25	CD9 (ENSNNAG00000013783) #26	ENSNNAG00000013798	ENSNNAG00000013826	ENSNNAG00000013874	ENSNNAG00000013881	ENSNNAG00000013923	ENSNNAG00000014414	ENSNNAG00000014603	ENSNNAG00000014623	PTHLH (ENSNNAG00000014641)	ENSNNAG00000014649
Elapidae_a	ANCESTRAL SPECIES	60								ENSGT00940000160821.i #12	ENSGT00440000033504.B #7	ENSGT00940000158225	ENSGT00940000155867.c.a	ENSGT00940000155867.c.b	ENSGT00940000158804	ENSGT00390000006066	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C.p #24	ENSGT00940000155840.C.o #24	ENSGT00940000155810.d #25	ENSGT00940000155083.b #26	ENSGT01030000234571.b.b.b.a.a.a	ENSGT00390000006367.c.e.a	ENSGT00390000006367.c.f	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088	ENSGT00940000159852
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00530000063534.a	ENSGT00390000012875.bb	ENSGT00940000160161 #19	ENSGT00390000006865 #18	ENSGT00940000153313.C.b #17	ENSGT00940000159401 #16	ENSGT00940000160821.i #12	ENSGT00940000160821.j #12	ENSGT00390000013224 #11	ENSGT00440000033504.B #7	ENSGT00940000158225	ENSGT00940000155867.c.b	ENSGT00940000158804	ENSGT00390000006066	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C.p #24	ENSGT00940000155840.C.o #24	ENSGT00940000155810.d #25	ENSGT00940000155083.b #26	ENSGT01030000234571.b.b.b.a.a.a	ENSGT00390000006367.c.e.a	ENSGT00390000006367.c.e.b.a	ENSGT00390000006367.c.f	ENSGT00390000015899	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT00940000166088
Mainland tiger snake	MODERN SPECIES	113									TIGAR (ENSNSUG00000006686) #11	CRACR2A (ENSNSUG00000006682) #7	TSPAN9 (ENSNSUG00000006663)	PRMT8 (ENSNSUG00000006660)	ENSNSUG00000006601	TEX52 (ENSNSUG00000006599)	KCNA1 (ENSNSUG00000006598) #20	KCNA5 (ENSNSUG00000006596) #22	NTF3 (ENSNSUG00000006594) #23	ANO2 (ENSNSUG00000006591) #24	ENSNSUG00000006590 #24	VWF (ENSNSUG00000006579) #25	CD9 (ENSNSUG00000006493) #26	ENSNSUG00000006487	ENSNSUG00000006485	ENSNSUG00000006458	ENSNSUG00000006454	CCDC91 (ENSNSUG00000006453)	PTHLH (ENSNSUG00000006452)	KLHL42 (ENSNSUG00000006451)	MRPS35 (ENSNSUG00000006449)	ENSNSUG00000006434	CDKN1B (ENSNSUG00000006433)
Eastern brown snake	MODERN SPECIES		ENSPTXG00000000012	ENSPTXG00000000023	GALNT8 (ENSPTXG00000000039) #19	NDUFA9 (ENSPTXG00000000084) #18	AKAP3 (ENSPTXG00000000143) #17	DYRK4 (ENSPTXG00000000169) #16	ENSPTXG00000000232 #12	ENSPTXG00000000244 #12	TIGAR (ENSPTXG00000000251) #11	CRACR2A (ENSPTXG00000000276) #7	TSPAN9 (ENSPTXG00000000348)	PRMT8 (ENSPTXG00000001050)	ENSPTXG00000001156	ENSPTXG00000001244	KCNA1 (ENSPTXG00000001245) #20	KCNA5 (ENSPTXG00000001251) #22	NTF3 (ENSPTXG00000001253) #23	ANO2 (ENSPTXG00000001257) #24	ENSPTXG00000001261 #24	ENSPTXG00000001265 #25	CD9 (ENSPTXG00000001268) #26	ENSPTXG00000001279	ENSPTXG00000001289	ENSPTXG00000001342	ENSPTXG00000001472	PTHLH (ENSPTXG00000001473)	KLHL42 (ENSPTXG00000001474)	MANSC4 (ENSPTXG00000001475)	MRPS35 (ENSPTXG00000001476)	ENSPTXG00000001481	CDKN1B (ENSPTXG00000001818)
Blue-lipped sea krait	MODERN SPECIES	3876															KCNA1 (ENSLLTG00000014014) #20	KCNA5 (ENSLLTG00000014021) #22
Anura	ANCESTRAL SPECIES	54											ENSGT00390000013337	ENSGT00530000064023	ENSGT00390000006865 #18	ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000007725.A.a #23	ENSGT00940000155840.C #24	ENSGT00940000155810 #25	ENSGT00940000155083.a ##26	ENSGT00940000156000	ENSGT01030000234588.b.b.b.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a	ENSGT00940000163509.b	ENSGT00940000158509	ENSGT00390000002110	ENSGT00620000088064	ENSGT00390000000080.a.b	ENSGT00940000157328.C	ENSGT00940000159577
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	6	CYFIP2 (ENSLLEG00000010284)	NIPAL4 (ENSLLEG00000010219)	THG1L (ENSLLEG00000010178)	ENSLLEG00000010157	ENSLLEG00000010134	ENSLLEG00000009939	RMND1 (ENSLLEG00000009792)	ARMT1 (ENSLLEG00000009748)	ENSLLEG00000009727	NDUFA9 (ENSLLEG00000009538) #18	ENSLLEG00000009517	ENSLLEG00000009507	ENSLLEG00000009481	ENSLLEG00000009470	KCNA1 (ENSLLEG00000009448) #20	ENSLLEG00000009430 #22	NTF3 (ENSLLEG00000009399) #23	ENSLLEG00000009336 #24	ENSLLEG00000009245 #24	ENSLLEG00000009234	ENSLLEG00000009172 #24	ENSLLEG00000009133	VWF (ENSLLEG00000007361) #25	ENSLLEG00000007170 ##26	ENSLLEG00000007138	CWF19L1 (ENSLLEG00000006695)	ENSLLEG00000006606	BPGM (ENSLLEG00000006580)	ENSLLEG00000006563	CALD1 (ENSLLEG00000005885)	ENSLLEG00000005787
Leishan spiny toad	MODERN SPECIES	4	ENSLLEG00000028853	SNX27 (ENSLLEG00000028804)	CELF3 (ENSLLEG00000028625)	ENSLLEG00000028580	ENSLLEG00000028569	ENSLLEG00000028555	ENSLLEG00000028545	ENSLLEG00000028539	ENSLLEG00000028532	ENSLLEG00000028498	ENSLLEG00000028463	ENSLLEG00000028444	ENSLLEG00000028437	ENSLLEG00000028370	ENSLLEG00000028314	ENSLLEG00000028283 #22	MRPL9 (ENSLLEG00000028056)	TDRKH (ENSLLEG00000027359)	SLC39A1 (ENSLLEG00000027243)	CRTC2 (ENSLLEG00000026815)	DENND4B (ENSLLEG00000025949)	GATAD2B (ENSLLEG00000025825)	SLC27A3 (ENSLLEG00000025697)	INTS3 (ENSLLEG00000024391)	ENSLLEG00000020721	ENSLLEG00000020526	ILF2 (ENSLLEG00000020373)	CHTOP (ENSLLEG00000020284)	ENSLLEG00000020018	S100A1 (ENSLLEG00000019973)	ENSLLEG00000019935
Frog	MODERN SPECIES	3	cnot8 (ENSXETG00000008409)	faxdc2 (ENSXETG00000008410)	ENSXETG00000048563	larp1 (ENSXETG00000008413)	hand1 (ENSXETG00000008479)	ENSXETG00000038734	ENSXETG00000044891	sap30l (ENSXETG00000034608)	galnt10 (ENSXETG00000008481)	ENSXETG00000043354	rmnd1 (ENSXETG00000026520)	armt1 (ENSXETG00000035782)	ndufa9 (ENSXETG00000008484) #18	kcna6 (ENSXETG00000008488)	kcna1 (ENSXETG00000048960) #20	kcna5 (ENSXETG00000008493) #22	ENSXETG00000042315	ENSXETG00000041412	ntf3 (ENSXETG00000008495) #23	ano2 (ENSXETG00000008496) #24	vwf (ENSXETG00000023591) #25	cd9 (ENSXETG00000023609) ##26	tnni1.2 (ENSXETG00000023613)	bpgm (ENSXETG00000023616)	ENSXETG00000041577	cald1 (ENSXETG00000023618)	havcr1 (ENSXETG00000026528)	sgcd (ENSXETG00000039919)	ENSXETG00000037566	ENSXETG00000044379	mrpl22 (ENSXETG00000019403)
Coelacanth	MODERN SPECIES	3416																KCNA5 (ENSLACG00000004176) #22
Actinopterygii	ANCESTRAL SPECIES	440														ENSGT00940000164299	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068
Reedfish	MODERN SPECIES		dnali1 (ENSECRG00000007590)	dnali1 (ENSECRG00000007642)	ckmb (ENSECRG00000007659)	rpp14 (ENSECRG00000007673)	HTD2 (ENSECRG00000007680)	xpot (ENSECRG00000007727)	ENSECRG00000007838	rtcb (ENSECRG00000007861)	stmp1 (ENSECRG00000007878)	coa6 (ENSECRG00000007887)	slc13a4 (ENSECRG00000007898)	zgc:162331 (ENSECRG00000007917)	ENSECRG00000007944	ENSECRG00000007978	KCNA1 (ENSECRG00000007987) #20	KCNA5 (ENSECRG00000007994) #22	large1 (ENSECRG00000008013)	braf (ENSECRG00000008072)	mrps33 (ENSECRG00000008201)	tmem178ba (ENSECRG00000008212)	cnot4b (ENSECRG00000008242)	ETV6 (ENSECRG00000008286)	ENSECRG00000008296	ENSECRG00000008306	ENSECRG00000008324	ENSECRG00000008351	ENSECRG00000008359	ENSECRG00000008376	ENSECRG00000008385	ENSECRG00000008397	TIMP3 (ENSECRG00000008411)
Neopterygii	ANCESTRAL SPECIES	21														ENSGT00940000164299.b.b	ENSGT00940000158576 #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068	ENSGT00940000162201.o	ENSGT01030000234588.b.b.a	ENSGT00390000007427	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a
Spotted gar	MODERN SPECIES	674	trmu (ENSLOCG00000016066)	ENSLOCG00000016071	GTSE1 (ENSLOCG00000016073)	tprkb (ENSLOCG00000016078)	alg10 (ENSLOCG00000016079)	CPNE8 (ENSLOCG00000016081)	KIF21A (ENSLOCG00000016087)	ABCD2 (ENSLOCG00000016096)	slc2a13b (ENSLOCG00000016098)	lrrk2 (ENSLOCG00000016102)	ENSLOCG00000016103	ENSLOCG00000016106	ENSLOCG00000016108	ENSLOCG00000016110	KCNA1 (ENSLOCG00000017909) #20	ENSLOCG00000017910 #22	ENSLOCG00000016111	large1 (ENSLOCG00000016113)	braf (ENSLOCG00000016118)	mrps33 (ENSLOCG00000016124)	tmem178ba (ENSLOCG00000016125)	cnot4b (ENSLOCG00000016126)	ENSLOCG00000017911	zgc:136858 (ENSLOCG00000016131)	mkrn1 (ENSLOCG00000016132)	TMEM121B (ENSLOCG00000017912)	ENSLOCG00000016133	rergla (ENSLOCG00000016134)	arhgef39 (ENSLOCG00000016136)	ENSLOCG00000016139	lmo3 (ENSLOCG00000016141)
Osteoglossocephalai	ANCESTRAL SPECIES	48												ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068	ENSGT00940000162201.o.d	ENSGT00390000007427	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a
Osteoglossiformes	ANCESTRAL SPECIES	467												ENSGT00940000156124.d.a	ENSGT00940000160758	ENSGT00940000164299.b.a.e	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497
P. kingsleyae	MODERN SPECIES	441												ENSPKIG00000023928	ARHGAP8 (ENSPKIG00000023988)	ENSPKIG00000024009	KCNA1 (ENSPKIG00000024016) #20	KCNA5 (ENSPKIG00000024025) #22	ENSPKIG00000024040	large1 (ENSPKIG00000024079)
Asian bonytongue	MODERN SPECIES	16	ZFC3H1 (ENSSFOG00015018112)	LGR5 (ENSSFOG00015018017)	ENSSFOG00015017995	ENSSFOG00015017977	PTPRR (ENSSFOG00015017949)	PTPRB (ENSSFOG00015017898)	KCNMB4 (ENSSFOG00015017867)	cnot2 (ENSSFOG00015017789)	PRPS1L1 (ENSSFOG00015027822)	ENSSFOG00015017638	ENSSFOG00015017623	kcnc2 (ENSSFOG00015017598)	ENSSFOG00015017547	ENSSFOG00015017535	KCNA1 (ENSSFOG00015028382) #20	KCNA5 (ENSSFOG00015017502) #22	ENSSFOG00015017460	large1 (ENSSFOG00015017446)	braf (ENSSFOG00015017340)	tmem178bb (ENSSFOG00015030519)	CNOT4 (ENSSFOG00015017285)	ENSSFOG00015017197	zgc:136858 (ENSSFOG00015017135)	mkrn1 (ENSSFOG00015017095)	TMEM121B (ENSSFOG00015017087)	ENSSFOG00015017045	rergla (ENSSFOG00015017026)	ENSSFOG00015018707	mdm2 (ENSSFOG00015017016)	slc35e3 (ENSSFOG00015028141)	nup107 (ENSSFOG00015016836)
Clupeocephala	ANCESTRAL SPECIES	46	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00940000154615.j	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00990000206310	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a	ENSGT00940000162201.o.d	ENSGT00940000156323.d	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000165644	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a
Euteleosteomorpha	ANCESTRAL SPECIES	100												ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a	ENSGT00940000162201.o.d	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000165644	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.j
Acanthomorphata	ANCESTRAL SPECIES	76	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT01030000236451	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT00940000158153.b	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a	ENSGT00940000162201.o.d	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000165644	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.j	ENSGT00390000007878
Euacanthomorphacea	ANCESTRAL SPECIES	45	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT01030000236451	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT00940000166983	ENSGT00940000156786	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a	ENSGT00940000162201.o.d	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000165644	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.j	ENSGT00390000007878
Percomorphaceae	ANCESTRAL SPECIES	153												ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22
Tiger tail seahorse	MODERN SPECIES	472	crebl2 (ENSHCOG00000006788)	gpr19 (ENSHCOG00000006781)	tbk1 (ENSHCOG00000006775)	lrp6 (ENSHCOG00000006745)	ENSHCOG00000006704	C11orf98 (ENSHCOG00000006693)	pthlha (ENSHCOG00000006686)	PHF21B (ENSHCOG00000006677)	nup50 (ENSHCOG00000006666)	kiaa0930 (ENSHCOG00000006638)	fbxo7 (ENSHCOG00000006599)	rtcb (ENSHCOG00000006450)	xpot (ENSHCOG00000006415)	rpl18a (ENSHCOG00000006361)	KCNA1 (ENSHCOG00000006347) #20	KCNA5 (ENSHCOG00000006337) #22	ENSHCOG00000006332	ENSHCOG00000006323	ENSHCOG00000006304	rab21 (ENSHCOG00000006297)	ENSHCOG00000006272	cradd (ENSHCOG00000006256)	ENSHCOG00000006253	sco2 (ENSHCOG00000006241)	dclre1c (ENSHCOG00000006196)	cpm (ENSHCOG00000006187)	ENSHCOG00000006176	TRHDE (ENSHCOG00000006167)	ENSHCOG00000006117	ENSHCOG00000006108	ENSHCOG00000006087
Percomorphaceae_B	ANCESTRAL SPECIES	40												ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00990000203553.c.a.b	ENSGT00950000183089.c.b	ENSGT00940000179738
Ovalentaria	ANCESTRAL SPECIES	24	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263559.A	ENSGT00950000183089.c.b	ENSGT00940000179738
Ovalentaria_B	ANCESTRAL SPECIES	66	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a.d	ENSGT00940000158576.a.a #20	ENSGT00940000158576.b #20	ENSGT00940000161860 #22
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Amphiprion	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Clown anemonefish	MODERN SPECIES	1213																KCNA5 (ENSAOCG00000009556) #22
Spiny chromis	MODERN SPECIES	2653																KCNA5 (ENSAPOG00000023382) #22
Cichlidae	ANCESTRAL SPECIES	76	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a.d	ENSGT00940000158576.a.a #20	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00950000183089.c.b	ENSGT00940000179738
Midas cichlid	MODERN SPECIES	131	ENSACIG00000008890	ENSACIG00000008924	pthlha (ENSACIG00000008938)	rpl18a (ENSACIG00000008969)	xpot (ENSACIG00000009016)	rtcb (ENSACIG00000009083)	fbxo7 (ENSACIG00000009124)	kiaa0930 (ENSACIG00000009209)	nup50 (ENSACIG00000009230)	PHF21B (ENSACIG00000009285)	ARHGAP8 (ENSACIG00000009320)	ENSACIG00000009346	ENSACIG00000009361 #20	KCNA1 (ENSACIG00000009374) #20	ENSACIG00000009386	KCNA5 (ENSACIG00000009397) #22	ENSACIG00000009415	gpr19 (ENSACIG00000009480)	crebl2 (ENSACIG00000009490)	dusp16 (ENSACIG00000009503)	eps8a (ENSACIG00000009533)	PTPRO (ENSACIG00000009597)	ENSACIG00000009741	socs2 (ENSACIG00000009764)	ENSACIG00000009779
Pseudocrenilabrinae	ANCESTRAL SPECIES	21	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a.d	ENSGT00940000158576.a.a #20	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00950000183089.c.b	ENSGT00940000179738
Nile tilapia	MODERN SPECIES	8	ENSONIG00000033613	ENSONIG00000032277	ENSONIG00000028513	ENSONIG00000007467	pthlha (ENSONIG00000007469)	rpl18a (ENSONIG00000037928)	xpot (ENSONIG00000007471)	rtcb (ENSONIG00000007474)	fbxo7 (ENSONIG00000007479)	kiaa0930 (ENSONIG00000007482)	nup50 (ENSONIG00000007489)	PHF21B (ENSONIG00000041576)	ARHGAP8 (ENSONIG00000007499)	ENSONIG00000020770	KCNA1 (ENSONIG00000020771) #20	KCNA5 (ENSONIG00000020772) #22	ENSONIG00000031263	ENSONIG00000020768	ENSONIG00000040068	ENSONIG00000007504	kcnd2 (ENSONIG00000040524)	ENSONIG00000039312	ncaph2 (ENSONIG00000007505)	sco2 (ENSONIG00000007516)	ENSONIG00000007517	FLNC (ENSONIG00000007519)	socs2 (ENSONIG00000007523)	cradd (ENSONIG00000007525)	PTPRO (ENSONIG00000007528)	eps8a (ENSONIG00000007534)	ENSONIG00000037215
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a.d	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00950000183089.c.b	ENSGT00940000179738	ENSGT00940000155472.a.b.a.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a	ENSGT00940000157983	ENSGT00390000014448	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000161847.b.a.e.a.b.d.e.a.a	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a.d	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00950000183089.c.b	ENSGT00940000179738	ENSGT00940000155472.a.b.a.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a	ENSGT00940000157983	ENSGT00390000014448	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764
Burton s mouthbrooder	MODERN SPECIES	487								f13a1b (ENSHBUG00000003951)	ENSHBUG00000003905	ENSHBUG00000003892	tex261 (ENSHBUG00000003871)	ENSHBUG00000003856	vax2 (ENSHBUG00000003841)	ADISSP (ENSHBUG00000003829)	KCNA1 (ENSHBUG00000003814) #20	KCNA5 (ENSHBUG00000003804) #22	ENSHBUG00000003796	H4C15 (ENSHBUG00000003790)	ENSHBUG00000003783	histh1l1 (ENSHBUG00000003743)	kcnd2 (ENSHBUG00000003729)	ncaph2 (ENSHBUG00000003702)	sco2 (ENSHBUG00000003685)	ENSHBUG00000003680	FLNC (ENSHBUG00000003663)	socs2 (ENSHBUG00000003594)	ENSHBUG00000000082	ENSHBUG00000003575	eps8a (ENSHBUG00000000077)	dusp16 (ENSHBUG00000003506)	crebl2 (ENSHBUG00000003492)
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00950000183127.c.b.d.a.a.b.g.a	ENSGT00940000161847.b.a.e.a.b.d.e.a.a	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00950000183089.c.b	ENSGT00940000179738	ENSGT00940000155472.a.b.a.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a	ENSGT00940000157983	ENSGT00390000014448	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764
P. nyererei	MODERN SPECIES	352					C11orf98 (ENSPNYG00000022726)	pthlha (ENSPNYG00000022731)	rpl18a (ENSPNYG00000022733)	xpot (ENSPNYG00000022747)	rtcb (ENSPNYG00000022760)	fbxo7 (ENSPNYG00000022773)	kiaa0930 (ENSPNYG00000022791)	nup50 (ENSPNYG00000022806)	PHF21B (ENSPNYG00000022819)	ARHGAP8 (ENSPNYG00000022829)	ENSPNYG00000022839 #20	KCNA5 (ENSPNYG00000022842) #22	ENSPNYG00000022850	ENSPNYG00000022857	ENSPNYG00000022875	ENSPNYG00000022885	kcnd2 (ENSPNYG00000022895)	ENSPNYG00000022900	ENSPNYG00000022905	sco2 (ENSPNYG00000022911)	ENSPNYG00000022918	FLNC (ENSPNYG00000022934)	socs2 (ENSPNYG00000022965)	ENSPNYG00000022975	PTPRO (ENSPNYG00000022994)	eps8a (ENSPNYG00000023025)	dusp16 (ENSPNYG00000023033)
Haplochromini_B	ANCESTRAL SPECIES	11	ENSGT00940000161847.b.a.e.a.b.d.e.a.a	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000002634.a.f.b.b.a.a	ENSGT00390000004933.k.a.e	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000158576.b #20	ENSGT00940000161860 #22	ENSGT00990000203553.c.a.a.b.a.a.b.a.a.b	ENSGT00940000156944.a.a	ENSGT01020000230360.d.f	ENSGT01100000263506.a.d.fb	ENSGT01100000263567.a.a.d.b.l	ENSGT00950000183089.c.b	ENSGT00940000155472.a.b.a.a	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a	ENSGT00940000157983	ENSGT00390000014448	ENSGT00940000154814.b	ENSGT00940000156403.b
Eastern happy	MODERN SPECIES	8	lrp6 (ENSACLG00000008507)	ENSACLG00000008502	C11orf98 (ENSACLG00000008497)	ENSACLG00000008489	pthlha (ENSACLG00000008477)	ENSACLG00000008466	rpl18a (ENSACLG00000008450)	xpot (ENSACLG00000008404)	rtcb (ENSACLG00000008367)	fbxo7 (ENSACLG00000008351)	kiaa0930 (ENSACLG00000008334)	nup50 (ENSACLG00000008324)	PHF21B (ENSACLG00000008319)	ARHGAP8 (ENSACLG00000008301)	ENSACLG00000007661 #20	KCNA5 (ENSACLG00000007649) #22	ENSACLG00000007642	ENSACLG00000007594	si:ch73-368j24.12 (ENSACLG00000007578)	kcnd2 (ENSACLG00000007563)	ncaph2 (ENSACLG00000007091)	sco2 (ENSACLG00000007084)	ENSACLG00000007078	FLNC (ENSACLG00000007030)	socs2 (ENSACLG00000007022)	ENSACLG00000007016	PTPRO (ENSACLG00000006942)	eps8a (ENSACLG00000006856)	dusp16 (ENSACLG00000006831)	crebl2 (ENSACLG00000006824)	gpr19 (ENSACLG00000006815)
Zebra mbuna	MODERN SPECIES	1099	C11orf98 (ENSMZEG00005019012)	ENSMZEG00005019009	lrp6 (ENSMZEG00005018989)	ENSMZEG00005018980	cbln10 (ENSMZEG00005018976)	rpl18a (ENSMZEG00005018966)	xpot (ENSMZEG00005018955)	rtcb (ENSMZEG00005018942)	fbxo7 (ENSMZEG00005018936)	kiaa0930 (ENSMZEG00005018930)	nup50 (ENSMZEG00005018926)	ENSMZEG00005018921	PHF21B (ENSMZEG00005018911)	ARHGAP8 (ENSMZEG00005018894)	ENSMZEG00005018883 #20	KCNA5 (ENSMZEG00005018878) #22	ENSMZEG00005018873	ENSMZEG00005018382	ENSMZEG00005018379	kcnd2 (ENSMZEG00005018374)	ENSMZEG00005018368	ncaph2 (ENSMZEG00005018364)	sco2 (ENSMZEG00005018361)	ENSMZEG00005018357	FLNC (ENSMZEG00005018342)	socs2 (ENSMZEG00005018335)	ENSMZEG00005018331	PTPRO (ENSMZEG00005018303)	eps8a (ENSMZEG00005018285)	dusp16 (ENSMZEG00005018278)	crebl2 (ENSMZEG00005018274)
Lyretail cichlid	MODERN SPECIES	291	ENSNBRG00000016224	ENSNBRG00000016672	lrp6 (ENSNBRG00000016750)	ENSNBRG00000016959	ENSNBRG00000016982	pthlha (ENSNBRG00000017000)	rpl18a (ENSNBRG00000017030)	xpot (ENSNBRG00000017136)	rtcb (ENSNBRG00000017202)	fbxo7 (ENSNBRG00000017228)	kiaa0930 (ENSNBRG00000017274)	nup50 (ENSNBRG00000017297)	PHF21B (ENSNBRG00000017322)	ARHGAP8 (ENSNBRG00000017345)	ENSNBRG00000017374 #20	KCNA5 (ENSNBRG00000017411) #22	ENSNBRG00000017422	ENSNBRG00000017433	ENSNBRG00000017451	ENSNBRG00000017463	kcnd2 (ENSNBRG00000017473)	ENSNBRG00000017491	sco2 (ENSNBRG00000017498)	ENSNBRG00000017517	FLNC (ENSNBRG00000017551)	socs2 (ENSNBRG00000017619)	ENSNBRG00000017690	PTPRO (ENSNBRG00000017713)	eps8a (ENSNBRG00000017888)	dusp16 (ENSNBRG00000017937)	crebl2 (ENSNBRG00000017962)
Atherinomorphae	ANCESTRAL SPECIES	37	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22
Oryzias	ANCESTRAL SPECIES	20	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000158692.f	ENSGT00390000017740.a.a.p	ENSGT00940000164058.j	ENSGT00390000004106	ENSGT01020000230588	ENSGT00940000176985	ENSGT00940000174747	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348
Oryzias_a	ANCESTRAL SPECIES	15	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000158692.f	ENSGT00390000017740.a.a.o.b	ENSGT00940000164058.j	ENSGT00390000004106	ENSGT01020000230588	ENSGT00940000176985	ENSGT00390000007831	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348
Chinese medaka	MODERN SPECIES	3504																KCNA5 (ENSOSIG00000002428) #22
Japanese Medaka HdrR	MODERN SPECIES	15	BEST3 (ENSORLG00000017413)	ENSORLG00000024499	ENSORLG00000024534	TYMP (ENSORLG00000017428)	LSM8 (ENSORLG00000017432)	grip1 (ENSORLG00000017453)	cand1 (ENSORLG00000017477)	ENSORLG00000017481	ENSORLG00000028525	ENSORLG00000026810	ENSORLG00000020776	ENSORLG00000027228	ENSORLG00000020773	ENSORLG00000023398	KCNA1 (ENSORLG00000020772) #20	KCNA5 (ENSORLG00000026805) #22	PTPRO (ENSORLG00000023226)	eps8a (ENSORLG00000029932)	dusp16 (ENSORLG00000024382)	crebl2 (ENSORLG00000020771)	gpr19 (ENSORLG00000020769)	tbk1 (ENSORLG00000026931)	lrp6 (ENSORLG00000024737)	ENSORLG00000026043	pthlha (ENSORLG00000023340)	C11orf98 (ENSORLG00000025008)	ENSORLG00000028493	ENSORLG00000028097	rpl18a (ENSORLG00000024868)	ENSORLG00000027947	ENSORLG00000026195
Cyprinodontiformes	ANCESTRAL SPECIES	19	ENSGT00530000063626.b	ENSGT00940000160214	ENSGT00940000156786	ENSGT00940000166983.c.b	ENSGT00940000157212.B	ENSGT00940000156088.c.a	ENSGT00950000183039.A	ENSGT00390000001285.i	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000156375	ENSGT00940000163529	ENSGT00940000155580.b.a.b.f	ENSGT00940000155911	ENSGT00390000007890	ENSGT00390000015797	ENSGT00390000004933.k.a	ENSGT00390000002615	ENSGT00940000169980	ENSGT00940000158990.t
Cyprinodontoidei	ANCESTRAL SPECIES	20	ENSGT00530000063626.b	ENSGT00940000160214	ENSGT00940000156786	ENSGT00940000161376	ENSGT00940000157212.B	ENSGT00940000156088.c.a	ENSGT00950000183039.A	ENSGT00390000001285.i	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000165907	ENSGT00510000049725	ENSGT00940000165344	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00390000009380	ENSGT00990000203541.a.a.a.a.a
NAME_4	ANCESTRAL SPECIES	171							ENSGT00390000006670	ENSGT00390000004190	ENSGT00940000164797.a.b	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000158576.b #20	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000165907	ENSGT00510000049725	ENSGT00940000165344	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00390000009380	ENSGT00990000203541.a.a.a.a.a
Sheepshead minnow	MODERN SPECIES	1200														ENSCVAG00000007274	KCNA1 (ENSCVAG00000007278) #20	KCNA5 (ENSCVAG00000007280) #22	atp6v1f (ENSCVAG00000007291)	lamtor4 (ENSCVAG00000007294)	ARF5 (ENSCVAG00000007314)	ENSCVAG00000007325
Mummichog	MODERN SPECIES	401				ENSFHEG00000007002	ENSFHEG00000006992	ENSFHEG00000006913	ENSFHEG00000006861	fbxo7 (ENSFHEG00000006853)	kiaa0930 (ENSFHEG00000006834)	ENSFHEG00000000182	nup50 (ENSFHEG00000006780)	PHF21B (ENSFHEG00000023243)	ARHGAP8 (ENSFHEG00000023240)	ENSFHEG00000023237 #20	ENSFHEG00000023214	KCNA5 (ENSFHEG00000023195) #22	atp6v1f (ENSFHEG00000023170)	lamtor4 (ENSFHEG00000023159)	arf5 (ENSFHEG00000023119)	gcc1 (ENSFHEG00000023078)	dennd6b (ENSFHEG00000023051)	ENSFHEG00000022936
Poeciliinae	ANCESTRAL SPECIES	19	ENSGT00940000157212.B	ENSGT00940000156088.c.a.f	ENSGT00950000183039.A	ENSGT00390000001285.i	ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.a.a.b	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.a	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.b.b	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000165907	ENSGT00510000049725	ENSGT00940000165344	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00390000009380	ENSGT00990000203541.a.a.a.a.a
Platyfish	MODERN SPECIES	8	epyc (ENSXMAG00000018588)	kera (ENSXMAG00000018602)	lum (ENSXMAG00000018604)	dcn (ENSXMAG00000027036)	ENSXMAG00000028648	btg1 (ENSXMAG00000018622)	fam3c (ENSXMAG00000018624)	ENSXMAG00000018632	impdh1b (ENSXMAG00000018652)	ENSXMAG00000028675	si:dkey-5i3.5 (ENSXMAG00000026885)	ENSXMAG00000025240	ENSXMAG00000026635	ENSXMAG00000020118	KCNA1 (ENSXMAG00000020119) #20	KCNA5 (ENSXMAG00000020121) #22	atp6v1f (ENSXMAG00000015320)	lamtor4 (ENSXMAG00000027828)	arf5 (ENSXMAG00000015306)	gcc1 (ENSXMAG00000015300)	dennd6b (ENSXMAG00000015257)	gnsa (ENSXMAG00000015215)	napepld (ENSXMAG00000003491)	yeats4 (ENSXMAG00000003474)	cpsf6 (ENSXMAG00000003459)	PRR5 (ENSXMAG00000003452)	ENSXMAG00000003487	ninj2 (ENSXMAG00000026883)	ENSXMAG00000029001	ERC1 (ENSXMAG00000005510)	FBXL14 (ENSXMAG00000029210)
Poecilia	ANCESTRAL SPECIES	29	ENSGT00390000001285.i	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.a.a	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.a	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.b.b	ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.a.a.b	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.a.b	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00990000206310	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000165907	ENSGT00510000049725	ENSGT00940000165344	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00390000009380	ENSGT00990000203541.a.a.a.a.a
Guppy	MODERN SPECIES	454	ENSPREG00000006187	H2BC18 (ENSPREG00000006198)	ENSPREG00000006327	ENSPREG00000006366	ENSPREG00000006432	ENSPREG00000006457	ENSPREG00000006539	fbxo7 (ENSPREG00000006546)	ENSPREG00000006565	kiaa0930 (ENSPREG00000006592)	nup50 (ENSPREG00000006626)	PHF21B (ENSPREG00000006644)	ARHGAP8 (ENSPREG00000006657)	ENSPREG00000006682	KCNA1 (ENSPREG00000006687) #20	KCNA5 (ENSPREG00000006696) #22	ENSPREG00000006710	atp6v1f (ENSPREG00000006723)	lamtor4 (ENSPREG00000006730)	arf5 (ENSPREG00000006744)	gcc1 (ENSPREG00000006764)	dennd6b (ENSPREG00000006776)	gnsa (ENSPREG00000006816)	ENSPREG00000006838	klhl42 (ENSPREG00000006874)	nrip2 (ENSPREG00000006888)	itfg2 (ENSPREG00000006906)	ascl1a (ENSPREG00000006969)	pah (ENSPREG00000006984)	th2 (ENSPREG00000007023)	nup37 (ENSPREG00000007053)
NAME_6	ANCESTRAL SPECIES	55	ENSGT00390000001285.i	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.a.a	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.a	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.b.b	ENSGT01020000230360.c.b.a.a.a.a.b.a.a.a.b.a.a.b	ENSGT00950000183089.c.a.k.b.b.k.a.a.a.a.a.b	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00990000206310	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000158420	ENSGT00440000039984.b	ENSGT00940000165907	ENSGT00510000049725	ENSGT00940000165344	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00940000164333	ENSGT00390000009380	ENSGT00990000203541.a.a.a.a.a
Amazon molly	MODERN SPECIES	320	CNOT2 (ENSPFOG00000015440)	KCNMB4 (ENSPFOG00000015443)	ENSPFOG00000015449	ENSPFOG00000020844	ENSPFOG00000020845	ENSPFOG00000015460	h2ax (ENSPFOG00000020620)	fbxo7 (ENSPFOG00000015474)	kiaa0930 (ENSPFOG00000015526)	nup50 (ENSPFOG00000015591)	ENSPFOG00000015620	ARHGAP8 (ENSPFOG00000015678)	ARHGAP8 (ENSPFOG00000015803)	ENSPFOG00000020846	KCNA1 (ENSPFOG00000020847) #20	KCNA5 (ENSPFOG00000015813) #22	atp6v1f (ENSPFOG00000015815)	lamtor4 (ENSPFOG00000015816)	arf5 (ENSPFOG00000015817)	gcc1 (ENSPFOG00000015840)	dennd6b (ENSPFOG00000015866)	gnsa (ENSPFOG00000016021)	zgc:194209 (ENSPFOG00000023542)	ENSPFOG00000016100	ENSPFOG00000016119	llph (ENSPFOG00000016134)	hcls1 (ENSPFOG00000024334)	ENSPFOG00000023403	ENSPFOG00000016139	guca1a (ENSPFOG00000016218)	orc5 (ENSPFOG00000016227)
Sailfin molly	MODERN SPECIES	188	ENSPLAG00000007308	ENSPLAG00000007286	ENSPLAG00000007247	ENSPLAG00000007131	ENSPLAG00000007101	ENSPLAG00000007049	ENSPLAG00000007001	ENSPLAG00000006977	fbxo7 (ENSPLAG00000006967)	kiaa0930 (ENSPLAG00000006962)	nup50 (ENSPLAG00000006935)	PHF21B (ENSPLAG00000006920)	ENSPLAG00000006907	ARHGAP8 (ENSPLAG00000006896)	ENSPLAG00000006861	KCNA5 (ENSPLAG00000006796) #22	ENSPLAG00000006791	atp6v1f (ENSPLAG00000006776)	lamtor4 (ENSPLAG00000006758)	arf5 (ENSPLAG00000006742)	gcc1 (ENSPLAG00000006724)	dennd6b (ENSPLAG00000006707)	gnsa (ENSPLAG00000006611)
Aplocheiloidei	ANCESTRAL SPECIES	249														ENSGT00940000161105	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000013208	ENSGT00390000016053	ENSGT00940000156878.i.b.a.a	ENSGT00940000153772.A	ENSGT00390000005529.b	ENSGT00940000156375
Turquoise killifish	MODERN SPECIES	1610								ENSNFUG00015000204	ENSNFUG00015000192	fbxo7 (ENSNFUG00015000179)	ENSNFUG00015000167	CKAP5 (ENSNFUG00015019253)	C25H11ORF49 (ENSNFUG00015019244)	PHF21B (ENSNFUG00015019234)	KCNA1 (ENSNFUG00015019226) #20	KCNA5 (ENSNFUG00015019220) #22	ATP6V1F (ENSNFUG00015019207)	LAMTOR4 (ENSNFUG00015019199)	arf5 (ENSNFUG00015019179)	gcc1 (ENSNFUG00015019173)	ENSNFUG00015019170	DENND6B (ENSNFUG00015019037)	ovch1 (ENSNFUG00015018908)	ENSNFUG00015018906	FLNC (ENSNFUG00015013279)	SOCS2 (ENSNFUG00015013183)	CRADD (ENSNFUG00015013180)	EPS8 (ENSNFUG00015013097)	dusp16 (ENSNFUG00015013078)	crebl2 (ENSNFUG00015013075)	GPR19 (ENSNFUG00015013073)
Mangrove rivulus	MODERN SPECIES	899															KCNA1 (ENSKMAG00000006683) #20	KCNA5 (ENSKMAG00000006659) #22
Percomorphaceae_C	ANCESTRAL SPECIES	22	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.b	ENSGT01020000230360.c.b.a.a.a.a.b.b	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT01090000260851	ENSGT00940000161376	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014
Eupercaria	ANCESTRAL SPECIES	21	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT01090000260851	ENSGT00940000161376	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Tetraodon	MODERN SPECIES	26	ENSTNIG00000003456	svopl (ENSTNIG00000003457)	mical3b (ENSTNIG00000003458)	lta4h (ENSTNIG00000003351)	dennd6b (ENSTNIG00000003350)	gcc1 (ENSTNIG00000003349)	arf5 (ENSTNIG00000003348)	lamtor4 (ENSTNIG00000001997)	atp6v1f (ENSTNIG00000001217)	tnpo3 (ENSTNIG00000003347)	irf5 (ENSTNIG00000003346)	fbxo7 (ENSTNIG00000003345)	kiaa0930 (ENSTNIG00000003344)	nup50 (ENSTNIG00000003343)	KCNA1 (ENSTNIG00000002493) #20	KCNA5 (ENSTNIG00000000276) #22	ENSTNIG00000002494	ENSTNIG00000002495	CNOT2 (ENSTNIG00000002496)	KCNMB4 (ENSTNIG00000002497)	ptprb (ENSTNIG00000002498)	PTPRR (ENSTNIG00000002499)	ENSTNIG00000002500	rab21 (ENSTNIG00000002501)	cand1 (ENSTNIG00000006486)	ENSTNIG00000006485	ENSTNIG00000006484	ENSTNIG00000001329	ENSTNIG00000006482	ECHDC3 (ENSTNIG00000001958)	kcnj8 (ENSTNIG00000006480)
Eupecaria_A	ANCESTRAL SPECIES	21	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT01090000260851	ENSGT00940000161376	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250
Ballan wrasse	MODERN SPECIES	727														ENSLBEG00000002954	ENSLBEG00000002989	KCNA5 (ENSLBEG00000003009) #22	ENSLBEG00000003041	ENSLBEG00000003113	histh1l1 (ENSLBEG00000003209)	ENSLBEG00000003264	ENSLBEG00000003631	ENSLBEG00000003657	ENSLBEG00000003740	ENSLBEG00000003766	KCNMB4 (ENSLBEG00000003791)
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT01090000260045.C	ENSGT00940000162761.b.b.a.d	ENSGT00940000162761.b.b.a.c.b.a.b	ENSGT00940000162761.b.b.a.c.b.a.a.b	ENSGT00940000162761.b.b.a.c.b.a.a.a.b	ENSGT00940000162761.b.b.a.c.b.b	ENSGT00940000162761.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.j	ENSGT00940000167172.a	ENSGT00940000159812	ENSGT00980000198670	ENSGT00940000159929	ENSGT00950000182887.C.a.a.b.a.a	ENSGT00940000155097	ENSGT00940000164078.a.b.b	ENSGT00940000161860 #22	ENSGT01100000263506.a.d	ENSGT01100000263474.a.b.b.o.a.a.c.b	ENSGT01100000263504.a.b.b.b.b.y	ENSGT01020000230360.c.b.a.b.a.b.c.a.a.b	ENSGT00990000203553.c.a.a.b.a.a.a.b	ENSGT00390000016584.c	ENSGT00940000164327.a	ENSGT00940000159087	ENSGT00940000157342.c.b	ENSGT00940000160014	ENSGT00940000157053.u.a	ENSGT00390000007635	ENSGT00950000182787.E.d.e.a	ENSGT00940000163584.b.a.a	ENSGT00940000159431
Eupecaria_C	ANCESTRAL SPECIES	18	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT01090000260851	ENSGT00940000161376	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	46	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263506.a.d	ENSGT01100000263474.a.b.b.o.a.a.c.b.a	ENSGT01100000263504.a.b.b.b.b.y
Large yellow croaker	MODERN SPECIES	491	lrp6 (ENSLCRG00005013310)	ENSLCRG00005013306	C11orf98 (ENSLCRG00005013303)	pthlha (ENSLCRG00005013301)	ENSLCRG00005013259	rpl18a (ENSLCRG00005013251)	xpot (ENSLCRG00005013248)	RTCB (ENSLCRG00005013246)	fbxo7 (ENSLCRG00005013243)	kiaa0930 (ENSLCRG00005013198)	nup50 (ENSLCRG00005013195)	ENSLCRG00005013194	ARHGAP8 (ENSLCRG00005013192)	ENSLCRG00005013190	KCNA1 (ENSLCRG00005013189) #20	KCNA5 (ENSLCRG00005013188) #22	ENSLCRG00005013185	ENSLCRG00005013184	ENSLCRG00005013182	ENSLCRG00005013178	ENSLCRG00005013177	ENSLCRG00005013176	ENSLCRG00005013175	ENSLCRG00005013157	ENSLCRG00005013153	PTPRR (ENSLCRG00005012683)	ENSLCRG00005012658	KCNMB4 (ENSLCRG00005012653)	rab21 (ENSLCRG00005012651)	ENSLCRG00005012650	ENSLCRG00005012649
European seabass	MODERN SPECIES	12	ENSDLAG00005027620	ENSDLAG00005016839	ENSDLAG00005026344	ENSDLAG00005028529	ENSDLAG00005003514	ENSDLAG00005031259	ENSDLAG00005029846	ENSDLAG00005003855	ENSDLAG00005033638	ENSDLAG00005030832	ENSDLAG00005012721	ENSDLAG00005021724	ENSDLAG00005032909	ENSDLAG00005028288	ENSDLAG00005028915 #20	ENSDLAG00005028030 #22	ENSDLAG00005030479	ENSDLAG00005027968	ENSDLAG00005029918	ENSDLAG00005029225	ENSDLAG00005027450	ENSDLAG00005028093	ENSDLAG00005028954	ENSDLAG00005035054	CNOT2 (ENSDLAG00005004306)	KCNMB4 (ENSDLAG00005032402)	PTPRB (ENSDLAG00005002586)	PTPRR (ENSDLAG00005002330)	ENSDLAG00005034249	ENSDLAG00005030274	ENSDLAG00005008158
Perciformes	ANCESTRAL SPECIES	155																ENSGT00940000161860 #22	ENSGT01100000263506.a.d
Perciformes_a	ANCESTRAL SPECIES	65													ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263506.a.d	ENSGT01060000248528.b	ENSGT00950000183089.c.a.k.a	ENSGT01100000263474.a.b.b.o.a.a.d.c.a.a.b	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT00940000161376	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777
Pike perch	MODERN SPECIES	175													ARHGAP8 (ENSSLUG00000017635)	ENSSLUG00000017619	KCNA1 (ENSSLUG00000017617) #20	KCNA5 (ENSSLUG00000017615) #22	ENSSLUG00000017613	H4C5 (ENSSLUG00000017611)	ENSSLUG00000017608	ENSSLUG00000017604	ENSSLUG00000017601	ENSSLUG00000017600	ENSSLUG00000017595	ENSSLUG00000017593	ENSSLUG00000017589	ENSSLUG00000017585	ENSSLUG00000017580	ENSSLUG00000017579	ENSSLUG00000017573	CNOT2 (ENSSLUG00000017384)	KCNMB4 (ENSSLUG00000017358)
Cottioidei	ANCESTRAL SPECIES	55	ENSGT00940000160365	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22
Lumpfish	MODERN SPECIES	15	pthlha (ENSCLMG00005015904)	ENSCLMG00005015902	ENSCLMG00005015901	ENSCLMG00005015900	rpl18a (ENSCLMG00005015897)	xpot (ENSCLMG00005015896)	rtcb (ENSCLMG00005015895)	fbxo7 (ENSCLMG00005015894)	ENSCLMG00005015893	kiaa0930 (ENSCLMG00005015891)	nup50 (ENSCLMG00005015886)	PHF21B (ENSCLMG00005015884)	ARHGAP8 (ENSCLMG00005015870)	ENSCLMG00005015866	KCNA1 (ENSCLMG00005015864) #20	KCNA5 (ENSCLMG00005015863) #22	ENSCLMG00005015862	ENSCLMG00005015861	ENSCLMG00005015860	ENSCLMG00005015858	ENSCLMG00005015856	ENSCLMG00005015853	ENSCLMG00005015852	ENSCLMG00005015850	ENSCLMG00005015849	ENSCLMG00005015848	ENSCLMG00005015847	ENSCLMG00005015237	KCNMB4 (ENSCLMG00005015222)	ENSCLMG00005015220	PTPRR (ENSCLMG00005014671)
Stickleback	MODERN SPECIES	402																KCNA5 (ENSGACG00000000592) #22
Percomorphaceae_D	ANCESTRAL SPECIES	22	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01020000230360.c.b.a.b.b.d.b.b	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.m.b	ENSGT01020000230360.c.b.a.a.a.a.b.b	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT00940000166983	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014
Anabantaria	ANCESTRAL SPECIES	27	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000172122	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT00940000166983	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212
Anabantoidei	ANCESTRAL SPECIES	21	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000172122	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B	ENSGT00940000166983	ENSGT00940000156786	ENSGT00940000160214	ENSGT00530000063626.b	ENSGT00550000074930	ENSGT00940000164590	ENSGT00940000157777	ENSGT00390000003014	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212
Climbing perch	MODERN SPECIES	14	gpr19 (ENSATEG00000001050)	tbk1 (ENSATEG00000000952)	ENSATEG00000000851	ENSATEG00000000814	ENSATEG00000000811	ENSATEG00000000802	xpot (ENSATEG00000000675)	ENSATEG00000000618	fbxo7 (ENSATEG00000000608)	kiaa0930 (ENSATEG00000000557)	NUP50 (ENSATEG00000000548)	PHF21B (ENSATEG00000000535)	ARHGAP8 (ENSATEG00000000525)	ENSATEG00000000519	ENSATEG00000000510 #20	ENSATEG00000027705 #22	ENSATEG00000000341	ENSATEG00000000268	ENSATEG00000026753	ENSATEG00000027822	ENSATEG00000025444	ENSATEG00000000361	ENSATEG00000027815	ENSATEG00000000254	ENSATEG00000023619	KCNMB4 (ENSATEG00000029116)	ENSATEG00000023608	PTPRR (ENSATEG00000023588)	ENSATEG00000023571	ENSATEG00000023553	ENSATEG00000023544
Siamese fighting fish	MODERN SPECIES	20	tbk1 (ENSBSLG00000002592)	lrp6 (ENSBSLG00000002259)	ENSBSLG00000002168	C11orf98 (ENSBSLG00000002152)	pthlha (ENSBSLG00000002140)	rpl18a (ENSBSLG00000002004)	xpot (ENSBSLG00000001958)	rtcb (ENSBSLG00000001934)	fbxo7 (ENSBSLG00000001914)	kiaa0930 (ENSBSLG00000001818)	nup50 (ENSBSLG00000001789)	PHF21B (ENSBSLG00000001771)	ARHGAP8 (ENSBSLG00000001743)	ENSBSLG00000001728	KCNA1 (ENSBSLG00000001725) #20	KCNA5 (ENSBSLG00000001717) #22	ENSBSLG00000001713	ENSBSLG00000001709	CNOT2 (ENSBSLG00000001697)	KCNMB4 (ENSBSLG00000013021)	PTPRB (ENSBSLG00000013010)	PTPRR (ENSBSLG00000012711)	ENSBSLG00000012697	rab21 (ENSBSLG00000012693)	LGR5 (ENSBSLG00000012672)	MYRFL (ENSBSLG00000012654)	cct2 (ENSBSLG00000012631)	nots (ENSBSLG00000012614)	BEST3 (ENSBSLG00000012556)	ENSBSLG00000012530	SHANK3 (ENSBSLG00000012131)
Zig-zag eel	MODERN SPECIES	15	ENSMAMG00000027690	C11orf98 (ENSMAMG00000027792)	ENSMAMG00000020730	ENSMAMG00000020722	xpot (ENSMAMG00000020690)	ENSMAMG00000020676	fbxo7 (ENSMAMG00000020670)	kiaa0930 (ENSMAMG00000020662)	NUP50 (ENSMAMG00000020659)	PHF21B (ENSMAMG00000020647)	ARHGAP8 (ENSMAMG00000020623)	ENSMAMG00000020641	ENSMAMG00000020615	ENSMAMG00000020610	ENSMAMG00000020604 #20	ENSMAMG00000020598 #22	ENSMAMG00000027613	H3C2 (ENSMAMG00000026026)	ENSMAMG00000020405	ENSMAMG00000027817	ENSMAMG00000027394	ENSMAMG00000027171	ENSMAMG00000028355	ENSMAMG00000025358	ENSMAMG00000026038	ENSMAMG00000025498	ENSMAMG00000024492	ENSMAMG00000020396	CNOT2 (ENSMAMG00000019519)	KCNMB4 (ENSMAMG00000025031)	PTPRR (ENSMAMG00000027020)
Carangaria	ANCESTRAL SPECIES	28	ENSGT00950000182937.B.b	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263474.a.b.a.b.a.d.m.a	ENSGT00990000203553.c.a.a.a.b.o	ENSGT01100000263567.a.a.d.b.l	ENSGT00950000183089.c.a.k.a	ENSGT01100000263474.a.b.a.b.a.d.m.b	ENSGT01060000248528.b	ENSGT01100000263504.a.b.b.b.b.y	ENSGT01100000263474.a.b.b.o.a.a.c.a	ENSGT00990000203553.c.a.a.b.b.b
Carangaria_A	ANCESTRAL SPECIES	69	ENSGT00940000158990.t	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263474.a.b.a.b.a.d.m.a
Barramundi perch	MODERN SPECIES	176													ARHGAP8 (ENSLCAG00010013810)	ENSLCAG00010013814	KCNA1 (ENSLCAG00010013818) #20	KCNA5 (ENSLCAG00010013820) #22	ENSLCAG00010013822	ENSLCAG00010013827	ENSLCAG00010013837	ENSLCAG00010013841	ENSLCAG00010013854	ENSLCAG00010013868	ENSLCAG00010013873	ENSLCAG00010013878	ENSLCAG00010013880	ENSLCAG00010013882	ENSLCAG00010013883	ENSLCAG00010013886	ENSLCAG00010013888	ENSLCAG00010013919	DENND11 (ENSLCAG00010014043)
Seriola	ANCESTRAL SPECIES	225															ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263474.a.b.a.b.a.d.m.a
Yellowtail amberjack	MODERN SPECIES	2814															KCNA1 (ENSSLDG00000022504) #20	KCNA5 (ENSSLDG00000022507) #22	ENSSLDG00000022520	ENSSLDG00000022569	ENSSLDG00000022575	ENSSLDG00000022585	ENSSLDG00000022589
Greater amberjack	MODERN SPECIES	85	crebl2 (ENSSDUG00000012216)	gpr19 (ENSSDUG00000012227)	tbk1 (ENSSDUG00000012247)	lrp6 (ENSSDUG00000012323)	ENSSDUG00000012429	C11orf98 (ENSSDUG00000012443)	pthlha (ENSSDUG00000012461)	rpl18a (ENSSDUG00000012476)	xpot (ENSSDUG00000012514)	rtcb (ENSSDUG00000012605)	fbxo7 (ENSSDUG00000012643)	kiaa0930 (ENSSDUG00000012657)	nup50 (ENSSDUG00000012674)	ENSSDUG00000012712	ARHGAP8 (ENSSDUG00000012800)	KCNA5 (ENSSDUG00000012819) #22	KCNA1 (ENSSDUG00000012828) #20	ENSSDUG00000012863	ENSSDUG00000012913	ENSSDUG00000013079	ENSSDUG00000013086	ENSSDUG00000013101	H4C15 (ENSSDUG00000013110)
Pleuronectoidei	ANCESTRAL SPECIES	61	ENSGT00940000158990.t	ENSGT00940000153377.A	ENSGT00940000169980	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT01100000263474.a.b.a.b.a.d.m.a
Tongue sole	MODERN SPECIES	18	lrp6 (ENSCSEG00000003824)	ENSCSEG00000003832	C11orf98 (ENSCSEG00000003836)	pthlha (ENSCSEG00000003838)	ENSCSEG00000003852	rpl18a (ENSCSEG00000003962)	xpot (ENSCSEG00000003973)	rtcb (ENSCSEG00000003986)	fbxo7 (ENSCSEG00000003998)	kiaa0930 (ENSCSEG00000004005)	nup50 (ENSCSEG00000004014)	PHF21B (ENSCSEG00000004019)	ARHGAP8 (ENSCSEG00000004032)	ENSCSEG00000004037	KCNA1 (ENSCSEG00000004039) #20	KCNA5 (ENSCSEG00000004042) #22	ENSCSEG00000004045	ENSCSEG00000004064	ENSCSEG00000004084	BEST3 (ENSCSEG00000004088)	ENSCSEG00000004115	ENSCSEG00000004121	ENSCSEG00000004132	SHANK3 (ENSCSEG00000004140)	TYMP (ENSCSEG00000004161)	lsm8 (ENSCSEG00000004164)	grip1 (ENSCSEG00000004167)	cand1 (ENSCSEG00000004187)	ENSCSEG00000004203	ENSCSEG00000004213	ENSCSEG00000004224
Turbot	MODERN SPECIES	11	tbk1 (ENSSMAG00000010611)	gpr19 (ENSSMAG00000010603)	crebl2 (ENSSMAG00000010592)	dusp16 (ENSSMAG00000010564)	pthlha (ENSSMAG00000010549)	ENSSMAG00000038023	xpot (ENSSMAG00000005164)	RTCB (ENSSMAG00000005096)	fbxo7 (ENSSMAG00000004980)	kiaa0930 (ENSSMAG00000004949)	NUP50 (ENSSMAG00000004935)	PHF21B (ENSSMAG00000004921)	ARHGAP8 (ENSSMAG00000004908)	ENSSMAG00000004901	ENSSMAG00000028658 #20	ENSSMAG00000004869 #22	ENSSMAG00000033492	ENSSMAG00000033602	ENSSMAG00000025869	ENSSMAG00000037682	ENSSMAG00000035341	ENSSMAG00000025041	ENSSMAG00000036859	ENSSMAG00000036691	ENSSMAG00000036977	ENSSMAG00000009612	CNOT2 (ENSSMAG00000006667)	ENSSMAG00000033923	PTPRR (ENSSMAG00000007255)	ENSSMAG00000007268	ENSSMAG00000021518
Pinecone sodierfish	MODERN SPECIES	15	tbk1 (ENSMMDG00005014700)	lrp6 (ENSMMDG00005013515)	ENSMMDG00005013484	C11orf98 (ENSMMDG00005013483)	pthlha (ENSMMDG00005013481)	rpl18a (ENSMMDG00005013443)	xpot (ENSMMDG00005012700)	rtcb (ENSMMDG00005012697)	fbxo7 (ENSMMDG00005012695)	kiaa0930 (ENSMMDG00005012692)	nup50 (ENSMMDG00005012690)	PHF21B (ENSMMDG00005012689)	ARHGAP8 (ENSMMDG00005012685)	ENSMMDG00005012683	KCNA1 (ENSMMDG00005012681) #20	KCNA5 (ENSMMDG00005012679) #22	ENSMMDG00005012678	large1 (ENSMMDG00005012660)	braf (ENSMMDG00005012144)	mrps33 (ENSMMDG00005012102)	tmem178bb (ENSMMDG00005012099)	cnot4b (ENSMMDG00005012021)	mkrn1 (ENSMMDG00005011999)	TMEM121B (ENSMMDG00005011997)	ENSMMDG00005011994	rergla (ENSMMDG00005011992)	arhgef39 (ENSMMDG00005011988)	lmo3 (ENSMMDG00005011966)	MGST1 (ENSMMDG00005011964)	MGST1 (ENSMMDG00005011959)	dera (ENSMMDG00005011720)
Protacanthopterygii	ANCESTRAL SPECIES	115	ENSGT01100000263936	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797.u.b	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190.i	ENSGT00940000154615.j	ENSGT00390000004190.j	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.i.b	ENSGT00390000011980.a.i.a	ENSGT00390000007878
Salmoninae	ANCESTRAL SPECIES	174	ENSGT00940000158990.t	ENSGT01100000263936	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797.u.b	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00940000154615.j	ENSGT00390000004190.i	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a.b	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.i.b	ENSGT00390000011980.a.i.a	ENSGT00390000007878
Salmoninae_a	ANCESTRAL SPECIES	117	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797.u.b	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00940000154615.j	ENSGT00390000004190.i	ENSGT00440000035348	ENSGT00940000161105.c	ENSGT00940000160758.e	ENSGT00940000161105.d	ENSGT00940000160758.f	ENSGT00940000164299.b.a.b	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401.sb	ENSGT00390000011401.rb.a	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a.c	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018.c.e	ENSGT00940000161146.e	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.i.b	ENSGT00390000011980.a.i.a
Oncorhynchus	ANCESTRAL SPECIES	84	ENSGT00390000007890.s	ENSGT00390000007890.t	ENSGT00940000155911	ENSGT00390000006670	ENSGT00390000004190.i	ENSGT00440000035348.t	ENSGT01030000236451	ENSGT00940000154615.j	ENSGT00390000004190.j	ENSGT00440000035348.s	ENSGT00940000161105.c	ENSGT00940000161105.d	ENSGT00940000160758.f	ENSGT00940000164299.b.a.b	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401.sb	ENSGT00390000011401.rb.a	ENSGT00390000015299.a.b.b.a	ENSGT00390000000068.a.a.c	ENSGT00950000183077.a.a	ENSGT00940000154822.a.i.b	ENSGT00940000159018.c.e	ENSGT00940000161146.e	ENSGT00940000159331.b.q.a	ENSGT00940000158219.b.m	ENSGT00940000155474.p.b.m.b.a.b
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	13	ENSOMYG00000066506	pthlha (ENSOMYG00000039493)	ENSOMYG00000073782	ENSOMYG00000073747	xpot (ENSOMYG00000068362)	rtcb (ENSOMYG00000053961)	fbxo7 (ENSOMYG00000052484)	ENSOMYG00000048014	kiaa0930 (ENSOMYG00000048214)	NUP50 (ENSOMYG00000077483)	PHF21B (ENSOMYG00000060481)	ARHGAP8 (ENSOMYG00000048540)	ENSOMYG00000072642	ENSOMYG00000065681	ENSOMYG00000076670 #20	ENSOMYG00000062269 #22	ENSOMYG00000059684	ENSOMYG00000065904	ENSOMYG00000073231	ENSOMYG00000073668	ENSOMYG00000024167	ENSOMYG00000059376	MRPS33 (ENSOMYG00000060858)	ENSOMYG00000052977	ENSOMYG00000074508	mgst1.1 (ENSOMYG00000069233)	ENSOMYG00000068143	ENSOMYG00000055752	ENSOMYG00000061707	dera (ENSOMYG00000001706)	ENSOMYG00000069579
Rainbow trout	MODERN SPECIES	6	ENSOMYG00000066968	ENSOMYG00000077767	ENSOMYG00000061357	ENSOMYG00000074384	yt6j (ENSOMYG00000055581)	ENSOMYG00000070120	ENSOMYG00000061660	kiaa0930 (ENSOMYG00000058652)	NUP50 (ENSOMYG00000073063)	ENSOMYG00000064897	PHF21B (ENSOMYG00000064095)	ENSOMYG00000051594	ARHGAP8 (ENSOMYG00000076354)	ENSOMYG00000052502	ENSOMYG00000060591 #20	ENSOMYG00000048109 #22	ENSOMYG00000074170	ENSOMYG00000057969	ENSOMYG00000051200	ENSOMYG00000068161	ENSOMYG00000063293	ENSOMYG00000049473	braf (ENSOMYG00000062844)	ENSOMYG00000062278	ENSOMYG00000048376	MRPS33 (ENSOMYG00000050367)	ENSOMYG00000054505	ENSOMYG00000065145	ENSOMYG00000059760	ENSOMYG00000025620	ENSOMYG00000045570
Oncorhynchus_a	ANCESTRAL SPECIES	274												ENSGT00940000161105.d	ENSGT00940000160758.f	ENSGT00940000164299.b.a.b	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	37	ENSOKIG00005045666	fbxo7 (ENSOKIG00005045661)	MFAP4 (ENSOKIG00005045655)	kiaa0930 (ENSOKIG00005045597)	ENSOKIG00005045585	ENSOKIG00005045573	ENSOKIG00005045567	ENSOKIG00005045560	ARHGAP8 (ENSOKIG00005045507)	ENSOKIG00005045500	ENSOKIG00005045496	ENSOKIG00005045493	ENSOKIG00005045488	ENSOKIG00005045483	ENSOKIG00005045477	KCNA5 (ENSOKIG00005045469) #22	ENSOKIG00005045444	ENSOKIG00005045402	ENSOKIG00005045383	ENSOKIG00005045341	ENSOKIG00005045336	ENSOKIG00005045333	braf (ENSOKIG00005045074)	mrps33 (ENSOKIG00005045020)	tmem178bb (ENSOKIG00005045010)	ENSOKIG00005045001	cnot4b (ENSOKIG00005044991)	mkrn1 (ENSOKIG00005044969)	TMEM121B (ENSOKIG00005044960)	ENSOKIG00005044942	rergla (ENSOKIG00005044923)
Coho salmon	MODERN SPECIES	1018								ENSOKIG00005043271	ENSOKIG00005043293	ENSOKIG00005043313	ENSOKIG00005043400	ENSOKIG00005043419	ENSOKIG00005043510	ENSOKIG00005043525	ENSOKIG00005043549 #20	KCNA5 (ENSOKIG00005043557) #22	ENSOKIG00005043573	ENSOKIG00005043611	ENSOKIG00005043621	ENSOKIG00005043634
Chinook salmon	MODERN SPECIES	1564																KCNA5 (ENSOTSG00005019985) #22	ENSOTSG00005019986
Salmo	ANCESTRAL SPECIES	423																ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	480																ENSSSAG00000104162 #22	ENSSSAG00000083251	ENSSSAG00000110618	ENSSSAG00000098815
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000085721	typh (ENSSSAG00000082552)	ENSSSAG00000093258	ENSSSAG00000100814	ENSSSAG00000059932	ENSSSAG00000091601	nrcama (ENSSSAG00000040135)	cntn1b (ENSSSAG00000100248)	pdzrn4 (ENSSSAG00000101602)	ENSSSAG00000090625	ENSSSAG00000095921	ENSSSAG00000120767	ENSSSAG00000114292	ENSSSAG00000084931 #20	ENSSSAG00000119496	ENSSSAG00000104877 #22	ENSSSAG00000117222	ENSSSAG00000118075	ENSSSAG00000019445	ENSSSAG00000005471	ENSSSAG00000065240	ENSSSAG00000103847	ENSSSAG00000082696
Huchen	MODERN SPECIES	9168																KCNA5 (ENSHHUG00000006251) #22
Northern pike	MODERN SPECIES	13	xpot (ENSELUG00000009337)	ENSELUG00000030600	rtcb (ENSELUG00000009275)	fbxo7 (ENSELUG00000009252)	kiaa0930 (ENSELUG00000009142)	MFAP4 (ENSELUG00000009196)	nup50 (ENSELUG00000009115)	ENSELUG00000029722	ARHGAP8 (ENSELUG00000034576)	ENSELUG00000026363	ENSELUG00000034416	ENSELUG00000010971	ENSELUG00000029533	KCNA1 (ENSELUG00000001102) #20	ENSELUG00000031918	KCNA5 (ENSELUG00000011018) #22	ENSELUG00000011044	large1 (ENSELUG00000011100)	ENSELUG00000034624	braf (ENSELUG00000011217)	mrps33 (ENSELUG00000033183)	FUT9 (ENSELUG00000027870)	GFUS (ENSELUG00000011340)	FUT9 (ENSELUG00000026673)	ENSELUG00000026347	FUT9 (ENSELUG00000032126)	GFUS (ENSELUG00000029921)	GFUS (ENSELUG00000033703)	FUT9 (ENSELUG00000031979)	ENSELUG00000011351	ENSELUG00000024649
Otomorpha	ANCESTRAL SPECIES	72												ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a.f	ENSGT00390000000068.a.a	ENSGT00940000162201.o.d	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018.c	ENSGT00940000161146	ENSGT00440000033863	ENSGT00940000153908.a	ENSGT00390000011980.a.i.b	ENSGT00390000011980.a.i.a
Clupeiformes	ANCESTRAL SPECIES	62	ENSGT00940000158990	ENSGT01100000263888	ENSGT00390000002615	ENSGT00390000004933.k.a	ENSGT00390000015797	ENSGT00390000007890	ENSGT00940000155911	ENSGT00390000006670	ENSGT00940000154615.j	ENSGT00390000004190	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00390000017181	ENSGT00940000158497	ENSGT00940000156154	ENSGT00390000011401	ENSGT00390000015299.a.b.b.a.f	ENSGT00390000000068.a.a	ENSGT00940000162201.o.d	ENSGT00950000183077.a.a	ENSGT00940000154822.a	ENSGT00940000159018.c	ENSGT00940000157998	ENSGT00390000001285.i	ENSGT00950000183039.A	ENSGT00940000156088.c.a	ENSGT00940000157212.B
Denticle herring	MODERN SPECIES	6	dusp16 (ENSDCDG00000033106)	lrp6 (ENSDCDG00000033133)	ENSDCDG00000033431	ENSDCDG00000033434	pthlha (ENSDCDG00000033436)	rpl18a (ENSDCDG00000033439)	xpot (ENSDCDG00000033451)	rtcb (ENSDCDG00000033460)	fbxo7 (ENSDCDG00000033461)	kiaa0930 (ENSDCDG00000033462)	nup50 (ENSDCDG00000033492)	ENSDCDG00000033495	ARHGAP8 (ENSDCDG00000033497)	ENSDCDG00000033499	KCNA1 (ENSDCDG00000033502) #20	KCNA5 (ENSDCDG00000033503) #22	ENSDCDG00000033505	rpap3 (ENSDCDG00000033517)	ENSDCDG00000033597	atp23 (ENSDCDG00000033598)	lrig3 (ENSDCDG00000033612)	zgc:165507 (ENSDCDG00000033847)	ENSDCDG00000033852	ENSDCDG00000033855	si:ch73-252i11.1 (ENSDCDG00000033858)	ENSDCDG00000033860	ENSDCDG00000033863	SYN3 (ENSDCDG00000033869)	TIMP3 (ENSDCDG00000033935)	ENSDCDG00000033938	fgl2a (ENSDCDG00000033940)
Atlantic herring	MODERN SPECIES	7	ENSCHAG00000004579	ical1 (ENSCHAG00000004377)	cxcr4a (ENSCHAG00000004341)	ENSCHAG00000004245	rpl18a (ENSCHAG00000004152)	xpot (ENSCHAG00000003782)	rtcb (ENSCHAG00000003684)	fbxo7 (ENSCHAG00000003651)	MFAP4 (ENSCHAG00000003636)	kiaa0930 (ENSCHAG00000003054)	nup50 (ENSCHAG00000002974)	PHF21B (ENSCHAG00000002870)	ARHGAP8 (ENSCHAG00000002409)	ENSCHAG00000027408	KCNA1 (ENSCHAG00000027405) #20	KCNA5 (ENSCHAG00000027402) #22	ENSCHAG00000027394	large1 (ENSCHAG00000027350)	large1 (ENSCHAG00000027266)	braf (ENSCHAG00000026762)	mrps33 (ENSCHAG00000026667)	tmem178bb (ENSCHAG00000026665)	cnot4b (ENSCHAG00000026630)	ENSCHAG00000026624	ENSCHAG00000026623	mkrn1 (ENSCHAG00000026620)	TMEM121B (ENSCHAG00000026618)	ENSCHAG00000026612	rab3ip (ENSCHAG00000026548)	CNOT2 (ENSCHAG00000026480)	KCNMB4 (ENSCHAG00000026471)
Otophysi	ANCESTRAL SPECIES	442												ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22
Cyprinoidei	ANCESTRAL SPECIES	342														ENSGT00940000161105	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22
Cyprininae	ANCESTRAL SPECIES	794										ENSGT00940000162902.c	ENSGT00940000158497.y.a	ENSGT00390000004190.a	ENSGT00440000035348.y	ENSGT00940000161105	ENSGT00940000158576.a.a.f #20	ENSGT00940000161860 #22	ENSGT00940000156786.r.a	ENSGT00940000157212.B.h
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	592										ENSGT00940000162902.c	ENSGT00940000158497.y.a	ENSGT00390000004190.a	ENSGT00440000035348.y	ENSGT00940000161105	ENSGT00940000158576.a.a.f #20	ENSGT00940000161860.g #22	ENSGT00940000156361.A.b	ENSGT00940000156786.r.a	ENSGT00940000157212.B.h
Golden-line barbel	MODERN SPECIES	807							TMEM19 (ENSSGRG00000038986)	ENSSGRG00000038994	ENSSGRG00000039008	ENSSGRG00000039011	large1 (ENSSGRG00000039013)	kiaa0930 (ENSSGRG00000039024)	nup50 (ENSSGRG00000039076)	PHF21B (ENSSGRG00000039077)	KCNA1 (ENSSGRG00000039078) #20	KCNA5 (ENSSGRG00000039079) #22	ENSSGRG00000039080	ENSSGRG00000039088	rab21 (ENSSGRG00000039123)	ENSSGRG00000039126	ENSSGRG00000039127	ptprb (ENSSGRG00000039128)	ENSSGRG00000039133
Common carp reference	MODERN SPECIES	36	zbed4 (ENSCCRG00000054681)	alg12 (ENSCCRG00000004852)	ENSCCRG00000059714	ENSCCRG00000068917	ENSCCRG00000061719	ENSCCRG00000047770	ENSCCRG00000049962	ENSCCRG00000049969	ENSCCRG00000057688	ENSCCRG00000062532	large1 (ENSCCRG00000058201)	ENSCCRG00000081925	nup50 (ENSCCRG00000061295)	ENSCCRG00000054462	ENSCCRG00000064668 #20	ENSCCRG00000065856 #22	ENSCCRG00000078700	ENSCCRG00000031637	ENSCCRG00000046783	ENSCCRG00000042329	ENSCCRG00000029671	ENSCCRG00000072580	ENSCCRG00000081275	ENSCCRG00000069296	ENSCCRG00000030323	ENSCCRG00000066681	ENSCCRG00000006086	ENSCCRG00000028366	ENSCCRG00000044670	ENSCCRG00000023261	ENSCCRG00000056613
Cyprininae_a	ANCESTRAL SPECIES	406				ENSGT00390000017998.j	ENSGT01030000234576.D.a.a.b.a.a.a.a	ENSGT00940000165554.d	ENSGT00940000159918.a.a.b	ENSGT00940000165554.c	ENSGT00940000159918.a.a.a	ENSGT00940000162902.d	ENSGT00940000158497.y.b	ENSGT00390000004190.b	ENSGT00440000035348.z	ENSGT00940000156124.d.c	ENSGT00940000158576.a.a.e #20	ENSGT00940000161860.h #22	ENSGT00940000156786.r.b	ENSGT00940000157212.B.g	ENSGT00940000156088.c.a.b	ENSGT00950000183052.a.a.b.a.a.a.b.a.a.a.a.a.a.a	ENSGT00530000063626.b.i	ENSGT00940000157998.j	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.b.b.b.a.a.a.b.a.b	ENSGT01090000260030.a.b.a.b.b.a.b.a.a.a.a.a.a.a.a.a.b.a.a.b.b	ENSGT00950000183108.a.c.b	ENSGT01070000253760.b.b.b.c.b.c.a.a.a.a.b.b.a
Golden-line barbel	MODERN SPECIES	295	BRD1 (ENSSGRG00000025492)	zbed4 (ENSSGRG00000025491)	alg12 (ENSSGRG00000025490)	creld2 (ENSSGRG00000025475)	ENSSGRG00000025464	TMEM19 (ENSSGRG00000025458)	ENSSGRG00000025456	ENSSGRG00000025294	ENSSGRG00000025293	ENSSGRG00000025292	large1 (ENSSGRG00000025288)	kiaa0930 (ENSSGRG00000025113)	nup50 (ENSSGRG00000025110)	PHF21B (ENSSGRG00000025109)	KCNA1 (ENSSGRG00000025108) #20	KCNA5 (ENSSGRG00000025107) #22
Common carp reference	MODERN SPECIES	8	ENSCCRG00000044817	ENSCCRG00000054204	ENSCCRG00000056202	ENSCCRG00000061406	ENSCCRG00000059315	ENSCCRG00000030754	ENSCCRG00000066962	ENSCCRG00000030769	ENSCCRG00000068469	ENSCCRG00000050969	large1 (ENSCCRG00000071746)	ENSCCRG00000007468	nup50 (ENSCCRG00000059149)	ENSCCRG00000002935	ENSCCRG00000079421 #20	ENSCCRG00000007597 #22	ENSCCRG00000061148	ENSCCRG00000050767	ENSCCRG00000035018	ENSCCRG00000038198	rab21 (ENSCCRG00000038196)	ENSCCRG00000035273	ptprb (ENSCCRG00000001544)	ENSCCRG00000067489	ENSCCRG00000033106	ENSCCRG00000020570	ENSCCRG00000011029	ENSCCRG00000004123	ENSCCRG00000057304	ENSCCRG00000045816	ENSCCRG00000032094
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	33	ENSCARG00000022283	ENSCARG00000022300	ENSCARG00000022426	TMEM19 (ENSCARG00000022434)	ENSCARG00000022441	ENSCARG00000022474	ENSCARG00000023207	ENSCARG00000023213	ENSCARG00000023227	large1 (ENSCARG00000023241)	kiaa0930 (ENSCARG00000023522)	nup50 (ENSCARG00000023607)	ENSCARG00000047497	KCNA1 (ENSCARG00000047553) #20	ENSCARG00000047605	KCNA5 (ENSCARG00000047633) #22	ENSCARG00000047639	ENSCARG00000047644	ENSCARG00000047688	ENSCARG00000047721	rab21 (ENSCARG00000047860)	ENSCARG00000047942	ptprb (ENSCARG00000048159)	ENSCARG00000049088	MYRFL (ENSCARG00000049130)	rab3ip (ENSCARG00000049348)	ENSCARG00000050005	ENSCARG00000050027	ENSCARG00000050038	ENSCARG00000050042	ENSCARG00000050058
Goldfish	MODERN SPECIES	21	ucn3l (ENSCARG00000021678)	copg2 (ENSCARG00000021697)	ENSCARG00000021805	ENSCARG00000022084	si:dkeyp-38g8.5 (ENSCARG00000022089)	epyc (ENSCARG00000022104)	tbc1d22a (ENSCARG00000022148)	cerk (ENSCARG00000022737)	ENSCARG00000022759	ENSCARG00000022765	large1 (ENSCARG00000022819)	kiaa0930 (ENSCARG00000024010)	nup50 (ENSCARG00000024274)	PHF21B (ENSCARG00000024295)	KCNA1 (ENSCARG00000024315) #20	KCNA5 (ENSCARG00000024336) #22	ENSCARG00000024342	ENSCARG00000024380	ENSCARG00000024390	ENSCARG00000024402	ENSCARG00000016604	trim24 (ENSCARG00000016620)	rab21 (ENSCARG00000016685)	ENSCARG00000016724	ENSCARG00000017711	nav3 (ENSCARG00000017765)	ENSCARG00000018015	ENSCARG00000018031	ENSCARG00000018046	ints13 (ENSCARG00000018087)	rassf8b (ENSCARG00000018184)
Characiphysae	ANCESTRAL SPECIES	15	ENSGT01100000263520.a.b.b.b	ENSGT00940000165554	ENSGT00940000159918.a.a	ENSGT00940000177041	ENSGT00940000162902	ENSGT00940000158497.x	ENSGT00940000158497.w	ENSGT00970000198356	ENSGT00390000004190	ENSGT00940000154615.j	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000159863	ENSGT00940000155961.k.a	ENSGT00940000157170	ENSGT00940000157478.b.c.a	ENSGT00940000154932.A.x	ENSGT00940000165017.b	ENSGT00940000162605.e	ENSGT00940000153394.c.b.b.c.b	ENSGT00940000160071	ENSGT00950000183090.B	ENSGT00940000161365	ENSGT00940000157236.i	ENSGT00940000160682.b.c.a
Channel catfish	MODERN SPECIES	10	slc37a3 (ENSIPUG00000012054)	ENSIPUG00000012084	ENSIPUG00000012034	ASCL4 (ENSIPUG00000012015)	ENSIPUG00000012003	large1 (ENSIPUG00000011925)	large1 (ENSIPUG00000011862)	ENSIPUG00000011827	Mfap4 (ENSIPUG00000011760)	kiaa0930 (ENSIPUG00000011717)	nup50 (ENSIPUG00000011655)	phf21b (ENSIPUG00000011560)	arhgap8 (ENSIPUG00000011519)	ENSIPUG00000011505	KCNA1 (ENSIPUG00000011494) #20	KCNA5 (ENSIPUG00000011481) #22	FBLN1 (ENSIPUG00000011330)	TRIM24 (ENSIPUG00000011218)	akr1d1 (ENSIPUG00000011135)	kdm5a (ENSIPUG00000010899)	ENSIPUG00000010867	usp15 (ENSIPUG00000010713)	ENSIPUG00000010692	ENSIPUG00000010683	ENSIPUG00000010674	IL17REL (ENSIPUG00000010638)	pim3 (ENSIPUG00000010614)	creld2 (ENSIPUG00000010501)	alg12 (ENSIPUG00000010451)	ZBED4 (ENSIPUG00000010442)	BRPF3 (ENSIPUG00000010366)
Characiphysae_b	ANCESTRAL SPECIES	58	ENSGT01100000263520.a.b.b.b	ENSGT00940000172894	ENSGT00940000159918.a.a	ENSGT00940000177041	ENSGT00940000162902	ENSGT00940000158497.x	ENSGT00940000158497.w	ENSGT00970000198356	ENSGT00390000004190	ENSGT00940000154615.j	ENSGT00440000035348	ENSGT00940000161105	ENSGT00940000160758	ENSGT00940000164299.b.a	ENSGT00940000158576.a.a #20	ENSGT00940000161860 #22	ENSGT00940000159863	ENSGT00940000155961.k.a	ENSGT00940000157170	ENSGT00940000157478.b.c.a	ENSGT00940000154932.A.x	ENSGT00940000165017.b	ENSGT00940000162605.e	ENSGT00940000153394.c.b.b.c.b	ENSGT00940000160071	ENSGT00950000183090.B	ENSGT00940000161365	ENSGT00940000157236.i	ENSGT00940000160682.b.c.a	ENSGT00940000159840.h	ENSGT00940000156976.fb
Characoidei	ANCESTRAL SPECIES	52	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01100000263520.a.b.b.b	ENSGT00940000172894	ENSGT00940000159918.a.a	ENSGT00940000177041	ENSGT00940000162902	ENSGT00940000158497.x	ENSGT00940000158497.w	ENSGT00390000017181	ENSGT00390000004190	ENSGT00940000154615.j	ENSGT00440000035348	ENSGT00940000156124.d	ENSGT00940000160758	ENSGT00940000161860 #22	ENSGT00940000159863	ENSGT00940000155961.k.a	ENSGT00940000157170	ENSGT00940000157478.b.c.a	ENSGT00940000154932.A.x	ENSGT00940000165017.b	ENSGT00940000162605.e	ENSGT00940000153394.c.b.b.c.b	ENSGT00940000160071	ENSGT00950000183090.B	ENSGT00940000161365	ENSGT00940000157236.i	ENSGT00940000159840.h	ENSGT00940000156976.fb	ENSGT00390000010968.b
Red-bellied piranha	MODERN SPECIES	30	ttll1 (ENSPNAG00000030047)	ENSPNAG00000030050	ENSPNAG00000030053	ENSPNAG00000030059	ENSPNAG00000000327	ENSPNAG00000000330	ENSPNAG00000007600	large1 (ENSPNAG00000000337)	large1 (ENSPNAG00000007612)	ENSPNAG00000007617	MFAP4 (ENSPNAG00000000349)	kiaa0930 (ENSPNAG00000007624)	nup50 (ENSPNAG00000007627)	ENSPNAG00000000362	ARHGAP8 (ENSPNAG00000000374)	KCNA5 (ENSPNAG00000007641) #22	FBLN1 (ENSPNAG00000007648)	trim24 (ENSPNAG00000000381)	ENSPNAG00000000385	KDM5A (ENSPNAG00000007671)	ENSPNAG00000007694	USP15 (ENSPNAG00000007714)	ENSPNAG00000007731	ENSPNAG00000007751	PIM3 (ENSPNAG00000000442)	creld2 (ENSPNAG00000007766)	alg12 (ENSPNAG00000000448)	BRD1 (ENSPNAG00000007783)
Mexicana tetra	MODERN SPECIES	22	ttll1 (ENSAMXG00000017172)	ENSAMXG00000017184	ENSAMXG00000017199	ENSAMXG00000017219	ENSAMXG00000038980	ENSAMXG00000032270	ASCL4 (ENSAMXG00000040714)	large1 (ENSAMXG00000039203)	large1 (ENSAMXG00000017299)	ENSAMXG00000036271	kiaa0930 (ENSAMXG00000017353)	MFAP4 (ENSAMXG00000034926)	nup50 (ENSAMXG00000008276)	ENSAMXG00000008304	ARHGAP8 (ENSAMXG00000032472)	KCNA5 (ENSAMXG00000043785) #22	ENSAMXG00000032158	FBLN1 (ENSAMXG00000017768)	ENSAMXG00000017792	ENSAMXG00000017809	KDM5A (ENSAMXG00000017813)	USP15 (ENSAMXG00000017820)	ENSAMXG00000041750	ENSAMXG00000017254	ENSAMXG00000042923	PIM3 (ENSAMXG00000037040)	creld2 (ENSAMXG00000017333)	alg12 (ENSAMXG00000030894)	zbed4 (ENSAMXG00000025839)	BRD1 (ENSAMXG00000017417)	GRAMD4 (ENSAMXG00000005254)
Electric eel	MODERN SPECIES	73	ENSEEEG00000020828	ENSEEEG00000020839	ENSEEEG00000020845	ENSEEEG00000020848	ASCL4 (ENSEEEG00000020850)	large1 (ENSEEEG00000020852)	large1 (ENSEEEG00000020868)	ENSEEEG00000020883	kiaa0930 (ENSEEEG00000020890)	MFAP4 (ENSEEEG00000020900)	nup50 (ENSEEEG00000020906)	ENSEEEG00000020910	ARHGAP8 (ENSEEEG00000020912)	ENSEEEG00000020913	KCNA1 (ENSEEEG00000020914) #20	KCNA5 (ENSEEEG00000020915) #22	ENSEEEG00000020916	trim24 (ENSEEEG00000020923)	AKR1D1 (ENSEEEG00000020936)	KDM5A (ENSEEEG00000021000)	USP15 (ENSEEEG00000021471)	ENSEEEG00000021495	ENSEEEG00000021496	PIM3 (ENSEEEG00000021498)	creld2 (ENSEEEG00000021499)	alg12 (ENSEEEG00000021500)	zbed4 (ENSEEEG00000021503)	BRD1 (ENSEEEG00000021504)	TAFA5 (ENSEEEG00000021505)
Elephant shark	MODERN SPECIES	1604						ccnd2a (ENSCMIG00000012706) #10	ENSCMIG00000012705	ENSCMIG00000012702	ENSCMIG00000012701 #13	zgc:154077 (ENSCMIG00000012699) #14	ENSCMIG00000012697 #15	ENSCMIG00000012692 #16	ndufa9 (ENSCMIG00000012667) #18	ENSCMIG00000012655	KCNA1 (ENSCMIG00000012654) #20	KCNA5 (ENSCMIG00000012652) #22	ntf3 (ENSCMIG00000012649) #23	ano2b (ENSCMIG00000012617) #24	VWF (ENSCMIG00000012486) #25	cd9 (ENSCMIG00000012373) #26	cwf19l1 (ENSCMIG00000012296)	ENSCMIG00000012262	tnni4a (ENSCMIG00000012259)	bpgm (ENSCMIG00000012257)	CALD1 (ENSCMIG00000012255)	ENSCMIG00000012249	si:cabz01085950.1 (ENSCMIG00000012246)	ENSCMIG00000012244	PTPRO (ENSCMIG00000012157)	eps8a (ENSCMIG00000012069)	strap (ENSCMIG00000012009)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000161860 #22
Lamprey	MODERN SPECIES	1183														RAPGEF2 (ENSPMAG00000002814)	ENSPMAG00000002807	ENSPMAG00000002805 #22	nudt2 (ENSPMAG00000002801)	wdr91 (ENSPMAG00000002798)