Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Primates	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00390000014309.n #20	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Gibbon	MODERN SPECIES	3	ENSNLEG00000009347 #7	ENSNLEG00000028839 #8	VAPB (ENSNLEG00000009351) #9	APCDD1L (ENSNLEG00000009359) #10	STX16 (ENSNLEG00000009365) #11	NPEPL1 (ENSNLEG00000009374) #12	ENSNLEG00000018276 #13	ENSNLEG00000009392 #14	NELFCD (ENSNLEG00000009524) #15	CTSZ (ENSNLEG00000009558) #16	TUBB1 (ENSNLEG00000009571) #17	ATP5F1E (ENSNLEG00000018656) #18	PRELID3B (ENSNLEG00000009579) #19	ENSNLEG00000029922 #20	ZNF831 (ENSNLEG00000009590) #21	EDN3 (ENSNLEG00000032826) #22	PHACTR3 (ENSNLEG00000009596) #23	SYCP2 (ENSNLEG00000009617) #24	PPP1R3D (ENSNLEG00000018277) #25	FAM217B (ENSNLEG00000032511) #26	ENSNLEG00000031666 #27	ENSNLEG00000034131 #28	CDH4 (ENSNLEG00000015745) #29	TAF4 (ENSNLEG00000015722) #30	LSM14B (ENSNLEG00000015757) #31	PSMA7 (ENSNLEG00000015772) #32	ENSNLEG00000015795 #33	MTG2 (ENSNLEG00000015799) #34	HRH3 (ENSNLEG00000026621) #35	OSBPL2 (ENSNLEG00000015814) #36	ADRM1 (ENSNLEG00000015858) #37
Hominidae	ANCESTRAL SPECIES	18	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.z.a #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00390000014309.n #20	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.z.a #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00390000014309.n #20	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Gorilla	MODERN SPECIES	11	ANKRD60 (ENSGGOG00000015521)	ENSGGOG00000015523	RAB22A (ENSGGOG00000015533) #7	VAPB (ENSGGOG00000007802) #9	APCDD1L (ENSGGOG00000007809) #10	STX16 (ENSGGOG00000000471) #11	ENSGGOG00000012505 #12	ENSGGOG00000043693 #13	ENSGGOG00000002843 #14	NELFCD (ENSGGOG00000006713) #15	CTSZ (ENSGGOG00000016618) #16	TUBB1 (ENSGGOG00000016621) #17	ATP5F1E (ENSGGOG00000016625) #18	PRELID3B (ENSGGOG00000004803) #19	ZNF831 (ENSGGOG00000016623) #21	EDN3 (ENSGGOG00000012885) #22	PHACTR3 (ENSGGOG00000014774) #23	SYCP2 (ENSGGOG00000010064) #24	FAM217B (ENSGGOG00000043885) #26	ENSGGOG00000038222	ENSGGOG00000012463	ENSGGOG00000036542 #28	CDH4 (ENSGGOG00000000182) #29	ENSGGOG00000002111 #30	LSM14B (ENSGGOG00000005630) #31	PSMA7 (ENSGGOG00000005634) #32	SS18L1 (ENSGGOG00000005638) #33	MTG2 (ENSGGOG00000005648) #34	HRH3 (ENSGGOG00000005654) #35	OSBPL2 (ENSGGOG00000008445) #36	ADRM1 (ENSGGOG00000008457) #37
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.z.a #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00390000014309.n #20	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Pan	ANCESTRAL SPECIES	15	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.z.a #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00390000014309.n #20	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b.c #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Chimpanzee	MODERN SPECIES	11	ENSPTRG00000013670	RAB22A (ENSPTRG00000044969) #7	VAPB (ENSPTRG00000013672) #9	APCDD1L (ENSPTRG00000022616) #10	STX16 (ENSPTRG00000013674) #11	NPEPL1 (ENSPTRG00000033985) #12	ENSPTRG00000047206 #13	GNAS (ENSPTRG00000032488) #14	NELFCD (ENSPTRG00000013678) #15	CTSZ (ENSPTRG00000013679) #16	TUBB1 (ENSPTRG00000013680) #17	ATP5F1E (ENSPTRG00000013681) #18	PRELID3B (ENSPTRG00000013682) #19	ENSPTRG00000044912 #20	ZNF831 (ENSPTRG00000013683) #21	EDN3 (ENSPTRG00000013684) #22	PHACTR3 (ENSPTRG00000013686) #23	SYCP2 (ENSPTRG00000013687) #24	PPP1R3D (ENSPTRG00000049506) #25	FAM217B (ENSPTRG00000052443) #26	CDH26 (ENSPTRG00000013690)	ENSPTRG00000051090 #28	CDH4 (ENSPTRG00000013693) #29	TAF4 (ENSPTRG00000013695) #30	LSM14B (ENSPTRG00000013696) #31	PSMA7 (ENSPTRG00000013699) #32	SS18L1 (ENSPTRG00000013700) #33	MTG2 (ENSPTRG00000013701) #34	HRH3 (ENSPTRG00000013702) #35	OSBPL2 (ENSPTRG00000013703) #36	ADRM1 (ENSPTRG00000013704) #37
Bonobo	MODERN SPECIES	11	ANKRD60 (ENSPPAG00000024429)	ENSPPAG00000027420	RAB22A (ENSPPAG00000030833) #7	VAPB (ENSPPAG00000034492) #9	APCDD1L (ENSPPAG00000036053) #10	STX16 (ENSPPAG00000037256) #11	NPEPL1 (ENSPPAG00000029224) #12	ENSPPAG00000033296 #13	ENSPPAG00000032982 #14	NELFCD (ENSPPAG00000042809) #15	CTSZ (ENSPPAG00000043518) #16	TUBB1 (ENSPPAG00000006799) #17	ATP5F1E (ENSPPAG00000017445) #18	PRELID3B (ENSPPAG00000027568) #19	ZNF831 (ENSPPAG00000034101) #21	EDN3 (ENSPPAG00000035671) #22	PHACTR3 (ENSPPAG00000037635) #23	SYCP2 (ENSPPAG00000031071) #24	FAM217B (ENSPPAG00000018830) #26	CDH26 (ENSPPAG00000036425)	ENSPPAG00000026709 #28	CDH4 (ENSPPAG00000031709) #29	ENSPPAG00000028916 #30	LSM14B (ENSPPAG00000035799) #31	PSMA7 (ENSPPAG00000026506) #32	SS18L1 (ENSPPAG00000035700) #33	MTG2 (ENSPPAG00000042468) #34	HRH3 (ENSPPAG00000025470) #35	OSBPL2 (ENSPPAG00000013340) #36	ADRM1 (ENSPPAG00000025509) #37	LAMA5 (ENSPPAG00000030723)
Human	MODERN SPECIES	12	PMEPA1 (ENSG00000124225)	C20orf85 (ENSG00000124237)	ANKRD60 (ENSG00000124227)	RAB22A (ENSG00000124209) #7	VAPB (ENSG00000124164) #9	APCDD1L (ENSG00000198768) #10	STX16 (ENSG00000124222) #11	NPEPL1 (ENSG00000215440) #12	GNAS (ENSG00000087460) #14	NELFCD (ENSG00000101158) #15	CTSZ (ENSG00000101160) #16	TUBB1 (ENSG00000101162) #17	ATP5F1E (ENSG00000124172) #18	PRELID3B (ENSG00000101166) #19	ZNF831 (ENSG00000124203) #21	EDN3 (ENSG00000124205) #22	PHACTR3 (ENSG00000087495) #23	SYCP2 (ENSG00000196074) #24	FAM217B (ENSG00000196227) #26	PPP1R3D (ENSG00000132825) #25	CDH26 (ENSG00000124215)	CDH4 (ENSG00000179242) #29	TAF4 (ENSG00000130699) #30	LSM14B (ENSG00000149657) #31	PSMA7 (ENSG00000101182) #32	SS18L1 (ENSG00000184402) #33	MTG2 (ENSG00000101181) #34	HRH3 (ENSG00000101180) #35	OSBPL2 (ENSG00000130703) #36	ADRM1 (ENSG00000130706) #37	LAMA5 (ENSG00000130702)
Orangutan	MODERN SPECIES	11	PMEPA1 (ENSPPYG00000041071)	C20orf85 (ENSPPYG00000031029)	ANKRD60 (ENSPPYG00000011169)	ENSPPYG00000011170	ENSPPYG00000011171 #7	VAPB (ENSPPYG00000011172) #9	APCDD1L (ENSPPYG00000011173) #10	STX16 (ENSPPYG00000011175) #11	NPEPL1 (ENSPPYG00000011176) #12	ENSPPYG00000011177 #14	ENSPPYG00000034786 #13	NELFCD (ENSPPYG00000011178) #15	CTSZ (ENSPPYG00000011179) #16	TUBB1 (ENSPPYG00000011180) #17	ZNF831 (ENSPPYG00000011183) #21	EDN3 (ENSPPYG00000011184) #22	PHACTR3 (ENSPPYG00000011185) #23	SYCP2 (ENSPPYG00000011186) #24	PPP1R3D (ENSPPYG00000011187) #25	FAM217B (ENSPPYG00000011188) #26	CDH26 (ENSPPYG00000011189)	CDH4 (ENSPPYG00000011193) #29	TAF4 (ENSPPYG00000029916) #30	LSM14B (ENSPPYG00000011194) #31	PSMA7 (ENSPPYG00000034580) #32	SS18L1 (ENSPPYG00000011197) #33	MTG2 (ENSPPYG00000011198) #34	HRH3 (ENSPPYG00000011199) #35	OSBPL2 (ENSPPYG00000011201) #36	ENSPPYG00000011205	CABLES2 (ENSPPYG00000011206)
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT00910000148525	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00910000148025
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT00910000148525	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00910000148025
Vervet Monkey	MODERN SPECIES	11	C20orf85 (ENSCSAG00000015520)	ANKRD60 (ENSCSAG00000015527)	ENSCSAG00000015540	RAB22A (ENSCSAG00000015545) #7	VAPB (ENSCSAG00000015551) #9	APCDD1L (ENSCSAG00000015555) #10	STX16 (ENSCSAG00000015564) #11	NPEPL1 (ENSCSAG00000015570) #12	ENSCSAG00000018739 #13	GNAS (ENSCSAG00000015577) #14	NELFCD (ENSCSAG00000015585) #15	CTSZ (ENSCSAG00000015592) #16	TUBB1 (ENSCSAG00000015595) #17	ATP5F1E (ENSCSAG00000015600) #18	ZNF831 (ENSCSAG00000015605) #21	EDN3 (ENSCSAG00000015608) #22	PHACTR3 (ENSCSAG00000015613) #23	SYCP2 (ENSCSAG00000015657) #24	PPP1R3D (ENSCSAG00000018738) #25	ENSCSAG00000015686	ENSCSAG00000015691	CDH4 (ENSCSAG00000015698) #29	TAF4 (ENSCSAG00000015714) #30	LSM14B (ENSCSAG00000015729) #31	PSMA7 (ENSCSAG00000015753) #32	SS18L1 (ENSCSAG00000015769) #33	MTG2 (ENSCSAG00000015774) #34	HRH3 (ENSCSAG00000015781) #35	OSBPL2 (ENSCSAG00000015788) #36	ADRM1 (ENSCSAG00000015796) #37	LAMA5 (ENSCSAG00000015940)
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT00910000148525	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.c #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00910000148025
Macaca	ANCESTRAL SPECIES	16	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.c #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00910000147450 #28	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Pig-tailed macaque	MODERN SPECIES	462	ENSMNEG00000043895	RAB22A (ENSMNEG00000028401) #7	VAPB (ENSMNEG00000041751) #9	APCDD1L (ENSMNEG00000045336) #10	STX16 (ENSMNEG00000044446) #11	NPEPL1 (ENSMNEG00000033474) #12	ENSMNEG00000003441 #13	ENSMNEG00000034347 #14	NELFCD (ENSMNEG00000032684) #15	CTSZ (ENSMNEG00000036117) #16	TUBB1 (ENSMNEG00000030119) #17	ENSMNEG00000043401	ATP5F1E (ENSMNEG00000030079) #18	ENSMNEG00000035689 #19	ZNF831 (ENSMNEG00000038486) #21	EDN3 (ENSMNEG00000039101) #22	PHACTR3 (ENSMNEG00000033528) #23	SYCP2 (ENSMNEG00000034411) #24	PPP1R3D (ENSMNEG00000005403) #25	FAM217B (ENSMNEG00000011065) #26	CDH26 (ENSMNEG00000045267)	ENSMNEG00000036031 #28	CDH4 (ENSMNEG00000020065) #29	TAF4 (ENSMNEG00000035762) #30	LSM14B (ENSMNEG00000045573) #31	PSMA7 (ENSMNEG00000027997) #32	SS18L1 (ENSMNEG00000039319) #33	MTG2 (ENSMNEG00000035874) #34	HRH3 (ENSMNEG00000044771) #35	ENSMNEG00000034576	OSBPL2 (ENSMNEG00000032024) #36
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.b.b.a.b	ENSGT00960000189526	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.c #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00390000017515.p
Crab-eating macaque	MODERN SPECIES	1	RAB22A (ENSMFAG00000044247) #7	VAPB (ENSMFAG00000034610) #9	STX16 (ENSMFAG00000034376) #11	ENSMFAG00000050935	NPEPL1 (ENSMFAG00000041186) #12	ENSMFAG00000056634	ENSMFAG00000035195 #13	ENSMFAG00000043651	GNAS (ENSMFAG00000056056) #14	NELFCD (ENSMFAG00000002141) #15	CTSZ (ENSMFAG00000001397) #16	TUBB1 (ENSMFAG00000038605) #17	ATP5F1E (ENSMFAG00000049506) #18	PRELID3B (ENSMFAG00000039743) #19	ZNF831 (ENSMFAG00000040583) #21	EDN3 (ENSMFAG00000039249) #22	PHACTR3 (ENSMFAG00000034633) #23	SYCP2 (ENSMFAG00000000376) #24	FAM217B (ENSMFAG00000030015) #26	CDH26 (ENSMFAG00000034675)	ENSMFAG00000063149	CDH4 (ENSMFAG00000042158) #29	TAF4 (ENSMFAG00000002330) #30	LSM14B (ENSMFAG00000041479) #31	PSMA7 (ENSMFAG00000000723) #32	SS18L1 (ENSMFAG00000038339) #33	ADRM1 (ENSMFAG00000042099) #37	MTG2 (ENSMFAG00000045680) #34	HRH3 (ENSMFAG00000040768) #35	OSBPL2 (ENSMFAG00000030160) #36	RPS21 (ENSMFAG00000002515)
Rhesus	MODERN SPECIES	1	ENSMMUG00000019944	RAB22A (ENSMMUG00000000125) #7	VAPB (ENSMMUG00000063760) #9	APCDD1L (ENSMMUG00000015528) #10	STX16 (ENSMMUG00000001833) #11	NPEPL1 (ENSMMUG00000010006) #12	ENSMMUG00000057461	ENSMMUG00000055986	GNAS (ENSMMUG00000010266) #14	NELFCD (ENSMMUG00000015390) #15	CTSZ (ENSMMUG00000015391) #16	TUBB1 (ENSMMUG00000012164) #17	ATP5F1E (ENSMMUG00000053623) #18	PRELID3B (ENSMMUG00000007560) #19	ZNF831 (ENSMMUG00000020745) #21	EDN3 (ENSMMUG00000016131) #22	PHACTR3 (ENSMMUG00000016292) #23	SYCP2 (ENSMMUG00000016294) #24	FAM217B (ENSMMUG00000057303) #26	PPP1R3D (ENSMMUG00000019469) #25	CDH26 (ENSMMUG00000008123)	ENSMMUG00000052443	CDH4 (ENSMMUG00000012314) #29	TAF4 (ENSMMUG00000008696) #30	LSM14B (ENSMMUG00000014084) #31	PSMA7 (ENSMMUG00000018354) #32	SS18L1 (ENSMMUG00000012606) #33	MTG2 (ENSMMUG00000012607) #34	HRH3 (ENSMMUG00000050324) #35	OSBPL2 (ENSMMUG00000012623) #36	RPS21 (ENSMMUG00000005006)
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT00910000148525	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.c #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00910000148025	ENSGT00390000013839 #37
Olive baboon	MODERN SPECIES	7	RAB22A (ENSPANG00000022760) #7	VAPB (ENSPANG00000022764) #9	ENSPANG00000044704	APCDD1L (ENSPANG00000022762) #10	ENSPANG00000037303	ENSPANG00000045832	NPEPL1 (ENSPANG00000020629) #12	ENSPANG00000043768	GNAS (ENSPANG00000020508) #14	NELFCD (ENSPANG00000011168) #15	CTSZ (ENSPANG00000020630) #16	TUBB1 (ENSPANG00000019323) #17	ATP5F1E (ENSPANG00000048306) #18	ENSPANG00000049124 #19	ZNF831 (ENSPANG00000000370) #21	EDN3 (ENSPANG00000000369) #22	PHACTR3 (ENSPANG00000020631) #23	SYCP2 (ENSPANG00000020632) #24	PPP1R3D (ENSPANG00000018275) #25	FAM217B (ENSPANG00000015362) #26	CDH26 (ENSPANG00000021462)	CDH4 (ENSPANG00000011746) #29	TAF4 (ENSPANG00000022570) #30	LSM14B (ENSPANG00000011747) #31	PSMA7 (ENSPANG00000020513) #32	ENSPANG00000040229 #33	MTG2 (ENSPANG00000024124) #34	HRH3 (ENSPANG00000011170) #35	OSBPL2 (ENSPANG00000011171) #36	ADRM1 (ENSPANG00000021463) #37	ENSPANG00000021054
Cercopithecinae_d	ANCESTRAL SPECIES	47	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT00910000148525	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.c #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00910000148025	ENSGT00390000013839 #37
Sooty mangabey	MODERN SPECIES	648	ENSCATG00000034770	RAB22A (ENSCATG00000011350) #7	VAPB (ENSCATG00000020776) #9	APCDD1L (ENSCATG00000038687) #10	ENSCATG00000029929	STX16 (ENSCATG00000019247) #11	NPEPL1 (ENSCATG00000040242) #12	ENSCATG00000012206 #13	ENSCATG00000039076 #14	NELFCD (ENSCATG00000036532) #15	CTSZ (ENSCATG00000022709) #16	TUBB1 (ENSCATG00000036381) #17	ATP5F1E (ENSCATG00000025312) #18	ENSCATG00000003223 #19	ZNF831 (ENSCATG00000038335) #21	EDN3 (ENSCATG00000042231) #22	PHACTR3 (ENSCATG00000033026) #23	SYCP2 (ENSCATG00000007239) #24	PPP1R3D (ENSCATG00000018767) #25	CDH26 (ENSCATG00000031972)	ENSCATG00000034819 #28
Drill	MODERN SPECIES	1087			VAPB (ENSMLEG00000025345) #9	APCDD1L (ENSMLEG00000035217) #10	STX16 (ENSMLEG00000029440) #11	NPEPL1 (ENSMLEG00000039486) #12	ENSMLEG00000036192 #13	ENSMLEG00000018242 #14	ENSMLEG00000031316	NELFCD (ENSMLEG00000012484) #15	CTSZ (ENSMLEG00000038716) #16	TUBB1 (ENSMLEG00000037666) #17	ATP5F1E (ENSMLEG00000032031) #18	ENSMLEG00000030481 #19	ZNF831 (ENSMLEG00000030734) #21	EDN3 (ENSMLEG00000031308) #22	PHACTR3 (ENSMLEG00000032882) #23	SYCP2 (ENSMLEG00000030694) #24	PPP1R3D (ENSMLEG00000027435) #25	FAM217B (ENSMLEG00000009217) #26	CDH26 (ENSMLEG00000033250)	CDH4 (ENSMLEG00000040626) #29	TAF4 (ENSMLEG00000041573) #30	LSM14B (ENSMLEG00000040895) #31	PSMA7 (ENSMLEG00000033853) #32	SS18L1 (ENSMLEG00000037833) #33	MTG2 (ENSMLEG00000040729) #34	HRH3 (ENSMLEG00000027666) #35	OSBPL2 (ENSMLEG00000043090) #36	ENSMLEG00000042538	ADRM1 (ENSMLEG00000041503) #37
Rhinopithecus	ANCESTRAL SPECIES	13	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT00910000148525	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00910000148025	ENSGT00390000013839 #37	ENSGT00940000156537
Black snub-nosed monkey	MODERN SPECIES	2878																ENSRBIG00000041914 #22
Golden snub-nosed monkey	MODERN SPECIES	1209	ANKRD60 (ENSRROG00000044987)	ENSRROG00000038763	RAB22A (ENSRROG00000043562) #7	VAPB (ENSRROG00000035212) #9	APCDD1L (ENSRROG00000029255) #10	STX16 (ENSRROG00000044711) #11	NPEPL1 (ENSRROG00000038029) #12	ENSRROG00000042384 #13	ENSRROG00000042757 #14	NELFCD (ENSRROG00000032620) #15	CTSZ (ENSRROG00000039294) #16	TUBB1 (ENSRROG00000029741) #17	ATP5F1E (ENSRROG00000014776) #18	PRELID3B (ENSRROG00000044337) #19	ZNF831 (ENSRROG00000033836) #21	EDN3 (ENSRROG00000041099) #22	PHACTR3 (ENSRROG00000014403) #23	SYCP2 (ENSRROG00000036065) #24	PPP1R3D (ENSRROG00000041886) #25	ENSRROG00000044130 #27	CDH4 (ENSRROG00000029814) #29	TAF4 (ENSRROG00000043238) #30	LSM14B (ENSRROG00000042949) #31	PSMA7 (ENSRROG00000043126) #32	SS18L1 (ENSRROG00000040133) #33	MTG2 (ENSRROG00000030772) #34	HRH3 (ENSRROG00000042867) #35	OSBPL2 (ENSRROG00000029664) #36	ENSRROG00000038495	ADRM1 (ENSRROG00000019480) #37	LAMA5 (ENSRROG00000035759)
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009.m.a #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d.k.a #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Mas night monkey	MODERN SPECIES	1347	ENSANAG00000033024	ENSANAG00000034725 #7	VAPB (ENSANAG00000029884) #9	APCDD1L (ENSANAG00000030163) #10	STX16 (ENSANAG00000026627) #11	ENSANAG00000038485	NPEPL1 (ENSANAG00000022337) #12	ENSANAG00000033741 #13	ENSANAG00000015974 #14	NELFCD (ENSANAG00000030608) #15	CTSZ (ENSANAG00000037739) #16	TUBB1 (ENSANAG00000022328) #17	ATP5F1E (ENSANAG00000023602) #18	PRELID3B (ENSANAG00000021504) #19	ZNF831 (ENSANAG00000018960) #21	EDN3 (ENSANAG00000020941) #22
Cebidae	ANCESTRAL SPECIES	13	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009.m.a #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d.k.a #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Marmoset	MODERN SPECIES	17	C20orf85 (ENSCJAG00000019072)	ANKRD60 (ENSCJAG00000075054)	RAB22A (ENSCJAG00000044464) #7	VAPB (ENSCJAG00000082702) #9	APCDD1L (ENSCJAG00000019021) #10	STX16 (ENSCJAG00000018995) #11	NPEPL1 (ENSCJAG00000018980) #12	ENSCJAG00000018939 #14	NELFCD (ENSCJAG00000018927) #15	CTSZ (ENSCJAG00000018918) #16	TUBB1 (ENSCJAG00000018914) #17	ENSCJAG00000073740 #18	ENSCJAG00000048161 #19	ENSCJAG00000085698	ZNF831 (ENSCJAG00000047641) #21	EDN3 (ENSCJAG00000018885) #22	PHACTR3 (ENSCJAG00000045721) #23	ENSCJAG00000087087	SYCP2 (ENSCJAG00000018836) #24	PPP1R3D (ENSCJAG00000018830) #25	FAM217B (ENSCJAG00000018823) #26	CDH4 (ENSCJAG00000042612) #29	ENSCJAG00000072353	TAF4 (ENSCJAG00000014438) #30	LSM14B (ENSCJAG00000014434) #31	PSMA7 (ENSCJAG00000014419) #32	SS18L1 (ENSCJAG00000014377) #33	MTG2 (ENSCJAG00000014360) #34	HRH3 (ENSCJAG00000048407) #35	OSBPL2 (ENSCJAG00000014300) #36	ENSCJAG00000014274 #37
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009.m.a #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00910000148824	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d.k.a #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.lb.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b	ENSGT00400000022086.b.b
Bolivian squirrel monkey	MODERN SPECIES	93	ENSSBOG00000030326	ENSSBOG00000031322 #7	ENSSBOG00000032634	VAPB (ENSSBOG00000023022) #9	APCDD1L (ENSSBOG00000030551) #10	STX16 (ENSSBOG00000035326) #11	NPEPL1 (ENSSBOG00000002808) #12	ENSSBOG00000013127 #13	ENSSBOG00000032092 #14	NELFCD (ENSSBOG00000024245) #15	CTSZ (ENSSBOG00000029319) #16	TUBB1 (ENSSBOG00000031264) #17	ATP5F1E (ENSSBOG00000032643) #18	PRELID3B (ENSSBOG00000019233) #19	ZNF831 (ENSSBOG00000031251) #21	EDN3 (ENSSBOG00000024971) #22	ENSSBOG00000027818 #23	SYCP2 (ENSSBOG00000030028) #24	ENSSBOG00000014792 #27	CDH4 (ENSSBOG00000028115) #29	TAF4 (ENSSBOG00000017534) #30	LSM14B (ENSSBOG00000032820) #31	PSMA7 (ENSSBOG00000030036) #32	SS18L1 (ENSSBOG00000021541) #33	MTG2 (ENSSBOG00000029055) #34	HRH3 (ENSSBOG00000032318) #35	OSBPL2 (ENSSBOG00000021294) #36	ADRM1 (ENSSBOG00000026290) #37	LAMA5 (ENSSBOG00000032418)	RPS21 (ENSSBOG00000021410)	CABLES2 (ENSSBOG00000032273)
Capuchin	MODERN SPECIES	311							ENSCCAG00000030335 #13	ENSCCAG00000020784 #14	ENSCCAG00000025793	NELFCD (ENSCCAG00000033432) #15	CTSZ (ENSCCAG00000023398) #16	TUBB1 (ENSCCAG00000023136) #17	ATP5F1E (ENSCCAG00000019746) #18	PRELID3B (ENSCCAG00000027593) #19	ZNF831 (ENSCCAG00000018807) #21	EDN3 (ENSCCAG00000029067) #22	PHACTR3 (ENSCCAG00000030544) #23	SYCP2 (ENSCCAG00000016906) #24	CDH26 (ENSCCAG00000020268)	CDH4 (ENSCCAG00000022146) #29	TAF4 (ENSCCAG00000020328) #30	LSM14B (ENSCCAG00000021267) #31	PSMA7 (ENSCCAG00000019388) #32	SS18L1 (ENSCCAG00000034514) #33	MTG2 (ENSCCAG00000035332) #34	HRH3 (ENSCCAG00000033589) #35	OSBPL2 (ENSCCAG00000035550) #36	ADRM1 (ENSCCAG00000027146) #37	LAMA5 (ENSCCAG00000021643)	ENSCCAG00000036700	CABLES2 (ENSCCAG00000029965)
Tarsier	MODERN SPECIES	6093										NELFCD (ENSTSYG00000006238) #15	CTSZ (ENSTSYG00000025940) #16	TUBB1 (ENSTSYG00000035411) #17	ATP5E (ENSTSYG00000012532) #18	PRELID3B (ENSTSYG00000027119) #19	ZNF831 (ENSTSYG00000031687) #21	EDN3 (ENSTSYG00000035350) #22
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Lemuriformes_a	ANCESTRAL SPECIES	70	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589
Greater bamboo lemur	MODERN SPECIES	539	ENSPSMG00000024282	RAB22A (ENSPSMG00000024270) #7	VAPB (ENSPSMG00000024263) #9	APCDD1L (ENSPSMG00000024253) #10	STX16 (ENSPSMG00000024206) #11	NPEPL1 (ENSPSMG00000024140) #12	ENSPSMG00000024112 #13	ENSPSMG00000024100	ENSPSMG00000024055 #14	NELFCD (ENSPSMG00000023924) #15	CTSZ (ENSPSMG00000023903) #16	TUBB1 (ENSPSMG00000023897) #17	ENSPSMG00000023893 #18	PRELID3B (ENSPSMG00000023888) #19	ZNF831 (ENSPSMG00000023870) #21	EDN3 (ENSPSMG00000023867) #22
Coquerels sifaka	MODERN SPECIES	659	ENSPCOG00000025348	RAB22A (ENSPCOG00000019205) #7	VAPB (ENSPCOG00000016680) #9	APCDD1L (ENSPCOG00000026436) #10	STX16 (ENSPCOG00000024711) #11	NPEPL1 (ENSPCOG00000027083) #12	ENSPCOG00000015620	GNAS (ENSPCOG00000028515) #14	ENSPCOG00000005755	NELFCD (ENSPCOG00000017651) #15	CTSZ (ENSPCOG00000024597) #16	TUBB1 (ENSPCOG00000027478) #17	ATP5F1E (ENSPCOG00000012175) #18	ENSPCOG00000019614 #19	ZNF831 (ENSPCOG00000021955) #21	EDN3 (ENSPCOG00000025385) #22	PHACTR3 (ENSPCOG00000014153) #23	ENSPCOG00000021778 #24	FAM217B (ENSPCOG00000016211) #26	CDH26 (ENSPCOG00000022452)
Mouse lemur	MODERN SPECIES	9	ENSMICG00000030582	ENSMICG00000008382 #7	VAPB (ENSMICG00000008389) #9	APCDD1L (ENSMICG00000008395) #10	STX16 (ENSMICG00000035104) #11	NPEPL1 (ENSMICG00000008410) #12	ENSMICG00000046510	GNAS (ENSMICG00000008427) #14	ENSMICG00000029253	NELFCD (ENSMICG00000014872) #15	CTSZ (ENSMICG00000014882) #16	TUBB1 (ENSMICG00000037644) #17	ATP5F1E (ENSMICG00000014899) #18	ENSMICG00000014902 #19	ZNF831 (ENSMICG00000028622) #21	EDN3 (ENSMICG00000042154) #22	PHACTR3 (ENSMICG00000006160) #23	SYCP2 (ENSMICG00000002560) #24	FAM217B (ENSMICG00000002583) #26	CDH26 (ENSMICG00000002587)	CDH4 (ENSMICG00000004615) #29	TAF4 (ENSMICG00000004029) #30	LSM14B (ENSMICG00000014675) #31	PSMA7 (ENSMICG00000014687) #32	SS18L1 (ENSMICG00000032545) #33	MTG2 (ENSMICG00000035055) #34	HRH3 (ENSMICG00000003541) #35	OSBPL2 (ENSMICG00000013373) #36	ADRM1 (ENSMICG00000013395) #37	LAMA5 (ENSMICG00000013411)	RPS21 (ENSMICG00000046562)
Bushbaby	MODERN SPECIES	138	C20orf85 (ENSOGAG00000003886)	ANKRD60 (ENSOGAG00000003888)	RAB22A (ENSOGAG00000015779) #7	VAPB (ENSOGAG00000015783) #9	APCDD1L (ENSOGAG00000032345) #10	STX16 (ENSOGAG00000030186) #11	NPEPL1 (ENSOGAG00000005052) #12	ENSOGAG00000026140 #13	ENSOGAG00000030135 #14	NELFCD (ENSOGAG00000014266) #15	CTSZ (ENSOGAG00000014271) #16	TUBB1 (ENSOGAG00000013378) #17	ATP5F1E (ENSOGAG00000029763) #18	PRELID3B (ENSOGAG00000013382) #19	ZNF831 (ENSOGAG00000026401) #21	EDN3 (ENSOGAG00000029876) #22	PHACTR3 (ENSOGAG00000004707) #23	ENSOGAG00000027091	SYCP2 (ENSOGAG00000004710) #24	PPP1R3D (ENSOGAG00000025179) #25	FAM217B (ENSOGAG00000004716) #26	CDH26 (ENSOGAG00000004717)	ENSOGAG00000026737	CDH4 (ENSOGAG00000007919) #29	ENSOGAG00000028531	TAF4 (ENSOGAG00000024820) #30	LSM14B (ENSOGAG00000003915) #31	ENSOGAG00000000931 #32	SS18L1 (ENSOGAG00000034040) #33	MTG2 (ENSOGAG00000000933) #34	HRH3 (ENSOGAG00000027837) #35
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Glires	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00940000155271	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00940000162488	ENSGT00950000182832.D.b	ENSGT00940000155271	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Myomorpha	ANCESTRAL SPECIES	9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00940000162488	ENSGT00950000182832.D.b	ENSGT00940000155271	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Golden Hamster	MODERN SPECIES	664	Ankrd60 (ENSMAUG00000007027)	Rab22a (ENSMAUG00000008648) #7	Vapb (ENSMAUG00000009589) #9	ENSMAUG00000007705 #11	Npepl1 (ENSMAUG00000010879) #12	ENSMAUG00000013938 #13	ENSMAUG00000021741	Gnas (ENSMAUG00000018730) #14	ENSMAUG00000014610	Nelfcd (ENSMAUG00000000986) #15	Ctsz (ENSMAUG00000000692) #16	Tubb1 (ENSMAUG00000000615) #17	Atp5e (ENSMAUG00000011798) #18	Prelid3b (ENSMAUG00000012780) #19	Zfp831 (ENSMAUG00000020089) #21	Edn3 (ENSMAUG00000017986) #22	Phactr3 (ENSMAUG00000014908) #23	ENSMAUG00000006215 #24	Ppp1r3d (ENSMAUG00000008145) #25	Fam217b (ENSMAUG00000018766) #26	Cdh26 (ENSMAUG00000000843)	Cdh4 (ENSMAUG00000001328) #29	Taf4 (ENSMAUG00000015258) #30	Lsm14b (ENSMAUG00000020700) #31	Psma7 (ENSMAUG00000011223) #32	Ss18l1 (ENSMAUG00000016777) #33	Mtg2 (ENSMAUG00000018040) #34	Hrh3 (ENSMAUG00000012652) #35	Osbpl2 (ENSMAUG00000014762) #36	ENSMAUG00000021991 #37	Lama5 (ENSMAUG00000015139)
Chinese hamster chok1gshd	MODERN SPECIES	195	Ankrd60 (ENSCGRG00001018234)	ENSCGRG00001019410	Rab22a (ENSCGRG00001020667) #7	ENSCGRG00001021398 #9	Stx16 (ENSCGRG00001022322) #11	Npepl1 (ENSCGRG00001004173) #12	ENSCGRG00001006757 #13	Gnas (ENSCGRG00001011341) #14	ENSCGRG00001015023	Nelfcd (ENSCGRG00001017868) #15	ctsz (ENSCGRG00001019207) #16	Tubb1 (ENSCGRG00001019710) #17	Atp5e (ENSCGRG00001020080) #18	PRELID3B (ENSCGRG00001020600) #19	Zfp831 (ENSCGRG00001022524) #21	Edn3 (ENSCGRG00001022875) #22	ENSCGRG00001023234	ENSCGRG00001000962	Phactr3 (ENSCGRG00001000442) #23	Sycp2 (ENSCGRG00001005901) #24	Ppp1r3d (ENSCGRG00001005943) #25	Fam217b (ENSCGRG00001009960) #26	Cdh26 (ENSCGRG00001011499)	Cdh4 (ENSCGRG00001014899) #29	Taf4 (ENSCGRG00001017027) #30	Lsm14b (ENSCGRG00001018399) #31	Psma7 (ENSCGRG00001019663) #32	Ss18l1 (ENSCGRG00001020942) #33	Mtg2 (ENSCGRG00001022321) #34	Hrh3 (ENSCGRG00001000439) #35	Osbpl2 (ENSCGRG00001005341) #36
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00960000189526	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Northern American deer mouse	MODERN SPECIES	17	Rab22a (ENSPEMG00000000644) #7	Vapb (ENSPEMG00000003426) #9	ENSPEMG00000005444 #10	Stx16 (ENSPEMG00000007473) #11	Npepl1 (ENSPEMG00000008023) #12	ENSPEMG00000025424 #13	ENSPEMG00000024729	ENSPEMG00000012296 #14	ENSPEMG00000013336	Nelfcd (ENSPEMG00000015186) #15	Ctsz (ENSPEMG00000016766) #16	Tubb1 (ENSPEMG00000025434) #17	ENSPEMG00000029167 #18	Prelid3b (ENSPEMG00000018251) #19	Zfp831 (ENSPEMG00000007113) #21	Edn3 (ENSPEMG00000029290) #22	Phactr3 (ENSPEMG00000014292) #23	Sycp2 (ENSPEMG00000011694) #24	Ppp1r3d (ENSPEMG00000013652) #25	Fam217b (ENSPEMG00000026646) #26	Cdh26 (ENSPEMG00000001082)	Cdh4 (ENSPEMG00000013577) #29	Taf4 (ENSPEMG00000015031) #30	Lsm14b (ENSPEMG00000017688) #31	ENSPEMG00000000274 #32	Ss18l1 (ENSPEMG00000002000) #33	Mtg2 (ENSPEMG00000008216) #34	Hrh3 (ENSPEMG00000008738) #35	Osbpl2 (ENSPEMG00000019925) #36	ENSPEMG00000020024 #37	ENSPEMG00000026336
Prairie vole	MODERN SPECIES	357	Ankrd60 (ENSMOCG00000015133)	Rab22a (ENSMOCG00000012268) #7	Vapb (ENSMOCG00000021172) #9	ENSMOCG00000003809 #11	Npepl1 (ENSMOCG00000000645) #12	ENSMOCG00000007565	ENSMOCG00000002631	ENSMOCG00000000293	ENSMOCG00000019997 #14	Nelfcd (ENSMOCG00000002859) #15	Ctsz (ENSMOCG00000000772) #16	Tubb1 (ENSMOCG00000020454) #17	Atp5e (ENSMOCG00000015267) #18	Prelid3b (ENSMOCG00000001444) #19	Zfp831 (ENSMOCG00000020881) #21	Edn3 (ENSMOCG00000012874) #22	Phactr3 (ENSMOCG00000018527) #23	ENSMOCG00000011369 #24	Ppp1r3d (ENSMOCG00000009566) #25	Fam217b (ENSMOCG00000014566) #26	Cdh26 (ENSMOCG00000015531)	Cdh4 (ENSMOCG00000021512) #29	Taf4 (ENSMOCG00000007554) #30	ENSMOCG00000020600 #31	ENSMOCG00000000346 #32	Ss18l1 (ENSMOCG00000015419) #33	Mtg2 (ENSMOCG00000018038) #34	Hrh3 (ENSMOCG00000019433) #35	Osbpl2 (ENSMOCG00000021030) #36	ENSMOCG00000014522 #37	Lama5 (ENSMOCG00000017230)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000157009 #7	ENSGT00860000136235	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Mus	ANCESTRAL SPECIES	1	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00860000136235	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Mus_A	ANCESTRAL SPECIES		ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00860000136235	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.u #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00860000136235	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.u #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Mus_C	ANCESTRAL SPECIES	1	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00860000136235	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.u #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
spretus	MODERN SPECIES	11	1700021F07Rik (MGP_SPRETEiJ_G0025670)	Ankrd60 (MGP_SPRETEiJ_G0025671)	Rab22a (MGP_SPRETEiJ_G0025672) #7	MGP_SPRETEiJ_G0025673	Vapb (MGP_SPRETEiJ_G0025674) #9	Stx16 (MGP_SPRETEiJ_G0025675) #11	Npepl1 (MGP_SPRETEiJ_G0025676) #12	Gnas (MGP_SPRETEiJ_G0025677) #14	MGP_SPRETEiJ_G0025678	Nelfcd (MGP_SPRETEiJ_G0025679) #15	Ctsz (MGP_SPRETEiJ_G0025680) #16	Tubb1 (MGP_SPRETEiJ_G0025681) #17	Atp5e (MGP_SPRETEiJ_G0025682) #18	Prelid3b (MGP_SPRETEiJ_G0025683) #19	Zfp831 (MGP_SPRETEiJ_G0025684) #21	Edn3 (MGP_SPRETEiJ_G0025685) #22	Phactr3 (MGP_SPRETEiJ_G0025686) #23	Sycp2 (MGP_SPRETEiJ_G0025687) #24	Ppp1r3d (MGP_SPRETEiJ_G0025688) #25	Fam217b (MGP_SPRETEiJ_G0025689) #26	Cdh26 (MGP_SPRETEiJ_G0025690)	Cdh4 (MGP_SPRETEiJ_G0025691) #29	MGP_SPRETEiJ_G0025692 #30	Lsm14b (MGP_SPRETEiJ_G0025693) #31	Psma7 (MGP_SPRETEiJ_G0025694) #32	Ss18l1 (MGP_SPRETEiJ_G0025695) #33	MGP_SPRETEiJ_G0025696 #34	Hrh3 (MGP_SPRETEiJ_G0025697) #35	Osbpl2 (MGP_SPRETEiJ_G0025698) #36	MGP_SPRETEiJ_G0025699 #37	Lama5 (MGP_SPRETEiJ_G0025700)
Steppe mouse	MODERN SPECIES	3237	Rab22a (ENSMSIG00000026825) #7	Vapb (ENSMSIG00000026843) #9	ENSMSIG00000026853	ENSMSIG00000026862	Stx16 (ENSMSIG00000026872) #11	Npepl1 (ENSMSIG00000026902) #12	ENSMSIG00000026915 #13	Gnas (ENSMSIG00000026932) #14	ENSMSIG00000027279	Nelfcd (ENSMSIG00000027285) #15	Ctsz (ENSMSIG00000027319) #16	Tubb1 (ENSMSIG00000027325) #17	Atp5e (ENSMSIG00000027334) #18	Prelid3b (ENSMSIG00000027339) #19	Zfp831 (ENSMSIG00000027355) #21	Edn3 (ENSMSIG00000027362) #22
Mouse	MODERN SPECIES	11	Zbp1 (ENSMUSG00000027514)	Pmepa1 (ENSMUSG00000038400)	1700021F07Rik (ENSMUSG00000027518)	Ankrd60 (ENSMUSG00000027517)	Rab22a (ENSMUSG00000027519) #7	Vapb (ENSMUSG00000054455) #9	Stx16 (ENSMUSG00000027522) #11	Npepl1 (ENSMUSG00000039263) #12	Gnas (ENSMUSG00000027523) #14	Nelfcd (ENSMUSG00000016253) #15	Ctsz (ENSMUSG00000016256) #16	Tubb1 (ENSMUSG00000016255) #17	Atp5e (ENSMUSG00000016252) #18	Prelid3b (ENSMUSG00000016257) #19	Zfp831 (ENSMUSG00000050600) #21	Edn3 (ENSMUSG00000027524) #22	Gm14444 (ENSMUSG00000078906)	Gm14393 (ENSMUSG00000078905)	Gm14399 (ENSMUSG00000090093)	Gm14443 (ENSMUSG00000078902)	Gm14391 (ENSMUSG00000078903)	Gm14440 (ENSMUSG00000078901)	Gm4631 (ENSMUSG00000078899)	Zfp968 (ENSMUSG00000078898)	Gm4724 (ENSMUSG00000078897)	Zfp965 (ENSMUSG00000078896)	Gm11007 (ENSMUSG00000094475)	Zfp969 (ENSMUSG00000095545)	Gm2007 (ENSMUSG00000094932)	Gm14288 (ENSMUSG00000078889)	Gm6710 (ENSMUSG00000078887)
Ryukyu mouse	MODERN SPECIES	11	Pmepa1 (MGP_CAROLIEiJ_G0024749)	1700021F07Rik (MGP_CAROLIEiJ_G0024750)	Ankrd60 (MGP_CAROLIEiJ_G0024751)	Rab22a (MGP_CAROLIEiJ_G0024752) #7	Vapb (MGP_CAROLIEiJ_G0024753) #9	Stx16 (MGP_CAROLIEiJ_G0024754) #11	Npepl1 (MGP_CAROLIEiJ_G0024755) #12	Gnas (MGP_CAROLIEiJ_G0024756) #14	MGP_CAROLIEiJ_G0024757	Nelfcd (MGP_CAROLIEiJ_G0024758) #15	Ctsz (MGP_CAROLIEiJ_G0024759) #16	Tubb1 (MGP_CAROLIEiJ_G0024760) #17	Atp5e (MGP_CAROLIEiJ_G0024761) #18	Prelid3b (MGP_CAROLIEiJ_G0024762) #19	Zfp831 (MGP_CAROLIEiJ_G0024763) #21	Edn3 (MGP_CAROLIEiJ_G0024764) #22	Phactr3 (MGP_CAROLIEiJ_G0024765) #23	Ppp1r3d (MGP_CAROLIEiJ_G0024767) #25	Cdh4 (MGP_CAROLIEiJ_G0024768) #29	MGP_CAROLIEiJ_G0024769 #30	Lsm14b (MGP_CAROLIEiJ_G0024770) #31	Psma7 (MGP_CAROLIEiJ_G0024771) #32	Ss18l1 (MGP_CAROLIEiJ_G0024772) #33	MGP_CAROLIEiJ_G0024773 #34	Hrh3 (MGP_CAROLIEiJ_G0024774) #35	MGP_CAROLIEiJ_G0024775 #36	MGP_CAROLIEiJ_G0024776 #37	MGP_CAROLIEiJ_G0024777	MGP_CAROLIEiJ_G0024778	Gata5 (MGP_CAROLIEiJ_G0024779)	MGP_CAROLIEiJ_G0024780
Shrew mouse	MODERN SPECIES	16	Pmepa1 (MGP_PahariEiJ_G0026190)	1700021F07Rik (MGP_PahariEiJ_G0026191)	Ankrd60 (MGP_PahariEiJ_G0026192)	Rab22a (MGP_PahariEiJ_G0026193) #7	MGP_PahariEiJ_G0026194	Vapb (MGP_PahariEiJ_G0026195) #9	Stx16 (MGP_PahariEiJ_G0026196) #11	Npepl1 (MGP_PahariEiJ_G0026197) #12	Gnas (MGP_PahariEiJ_G0026198) #14	MGP_PahariEiJ_G0026199	Nelfcd (MGP_PahariEiJ_G0026200) #15	Ctsz (MGP_PahariEiJ_G0026201) #16	MGP_PahariEiJ_G0026202 #17	Prelid3b (MGP_PahariEiJ_G0026204) #19	Zfp831 (MGP_PahariEiJ_G0026205) #21	Edn3 (MGP_PahariEiJ_G0026206) #22	Phactr3 (MGP_PahariEiJ_G0026207) #23	Sycp2 (MGP_PahariEiJ_G0026208) #24	Ppp1r3d (MGP_PahariEiJ_G0026209) #25	Fam217b (MGP_PahariEiJ_G0026210) #26	Cdh26 (MGP_PahariEiJ_G0026211)	Cdh4 (MGP_PahariEiJ_G0026212) #29	MGP_PahariEiJ_G0026213 #30	Lsm14b (MGP_PahariEiJ_G0026214) #31	Psma7 (MGP_PahariEiJ_G0026215) #32	Ss18l1 (MGP_PahariEiJ_G0026216) #33	MGP_PahariEiJ_G0026217 #34	Hrh3 (MGP_PahariEiJ_G0026218) #35	Osbpl2 (MGP_PahariEiJ_G0026219) #36	MGP_PahariEiJ_G0026220 #37	MGP_PahariEiJ_G0026221 #37
Rat	MODERN SPECIES	13	Rab22a (ENSRNOG00000005762) #7	ENSRNOG00000069922	Vapb (ENSRNOG00000005331) #9	Apcdd1l (ENSRNOG00000028440) #10	Stx16 (ENSRNOG00000005281) #11	Npepl1 (ENSRNOG00000028384) #12	Gnas (ENSRNOG00000025889) #13	Gnas (ENSRNOG00000047374) #14	ENSRNOG00000062644	Nelfcd (ENSRNOG00000047874) #15	Ctsz (ENSRNOG00000050697) #16	Tubb1 (ENSRNOG00000046151) #17	Atp5f1e (ENSRNOG00000049912) #18	Prelid3b (ENSRNOG00000046644) #19	Zfp831 (ENSRNOG00000024693) #21	Edn3 (ENSRNOG00000007477) #22	ENSRNOG00000067347	ENSRNOG00000067752	ENSRNOG00000068131	LOC103690425 (ENSRNOG00000063044)	ENSRNOG00000063189	LOC120101822 (ENSRNOG00000069723)	ENSRNOG00000069989	ENSRNOG00000070526	LOC102550520 (ENSRNOG00000069524)	LOC689816 (ENSRNOG00000068305)	LOC100912009 (ENSRNOG00000067302)	ENSRNOG00000069241	LOC102554315 (ENSRNOG00000006112)	ENSRNOG00000070181	ENSRNOG00000068538
Upper Galilee mountains blind mole rat	MODERN SPECIES	460	1700021F07Rik (ENSNGAG00000014781)	Ankrd60 (ENSNGAG00000014698)	Rab22a (ENSNGAG00000012652) #7	ENSNGAG00000011035 #9	ENSNGAG00000023410 #11	Npepl1 (ENSNGAG00000023126) #12	ENSNGAG00000021541	ENSNGAG00000021380 #13	ENSNGAG00000024204 #14	Nelfcd (ENSNGAG00000023479) #15	Ctsz (ENSNGAG00000021974) #16	Tubb1 (ENSNGAG00000021242) #17	Atp5e (ENSNGAG00000020360) #18	Prelid3b (ENSNGAG00000023745) #19	Zfp831 (ENSNGAG00000014363) #21	Edn3 (ENSNGAG00000022936) #22	Phactr3 (ENSNGAG00000008093) #23	ENSNGAG00000018823 #24	Ppp1r3d (ENSNGAG00000001530) #25	Fam217b (ENSNGAG00000019908) #26	Cdh26 (ENSNGAG00000015491)
Lesser Egyptian jerboa	MODERN SPECIES	171	ENSJJAG00000014473 #7	ENSJJAG00000014923 #9	ENSJJAG00000013975	ENSJJAG00000015284 #11	Npepl1 (ENSJJAG00000017604) #12	ENSJJAG00000013483 #13	ENSJJAG00000017931	ENSJJAG00000018225	ENSJJAG00000018466	Nelfcd (ENSJJAG00000018738) #15	Ctsz (ENSJJAG00000019111) #16	Tubb1 (ENSJJAG00000019495) #17	Atp5e (ENSJJAG00000019610) #18	ENSJJAG00000020252 #19	Zfp831 (ENSJJAG00000020817) #21	Edn3 (ENSJJAG00000021058) #22	Phactr3 (ENSJJAG00000022387) #23	ENSJJAG00000002434 #24	Fam217b (ENSJJAG00000004859) #26	Cdh26 (ENSJJAG00000007415)	Cdh4 (ENSJJAG00000010912) #29	Taf4 (ENSJJAG00000011875) #30	Lsm14b (ENSJJAG00000012728) #31	ENSJJAG00000008311 #32	Ss18l1 (ENSJJAG00000009378) #33	Mtg2 (ENSJJAG00000010435) #34	Hrh3 (ENSJJAG00000010764) #35	Osbpl2 (ENSJJAG00000011104) #36	ENSJJAG00000011363 #37	Lama5 (ENSJJAG00000014033)	Rps21 (ENSJJAG00000016454)
Kangaroo rat	MODERN SPECIES	394	ENSDORG00000024827	Pck1 (ENSDORG00000010927)	1700021F07Rik (ENSDORG00000005273)	ENSDORG00000005274	Rab22a (ENSDORG00000001998) #7	Vapb (ENSDORG00000028488) #9	Stx16 (ENSDORG00000007578) #11	Npepl1 (ENSDORG00000001643) #12	ENSDORG00000028088	ENSDORG00000004279 #14	Nelfcd (ENSDORG00000004285) #15	Ctsz (ENSDORG00000004288) #16	Tubb1 (ENSDORG00000014668) #17	Atp5e (ENSDORG00000014669) #18	Prelid3b (ENSDORG00000014670) #19	Edn3 (ENSDORG00000028014) #22	Phactr3 (ENSDORG00000007756) #23	Sycp2 (ENSDORG00000007757) #24	Fam217b (ENSDORG00000027592) #26
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b.j
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B.n #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.p
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B.n #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00960000189526	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.gb.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00950000183113.a.b	ENSGT00390000002707	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000155407	ENSGT00940000157965	ENSGT00940000161086	ENSGT00530000063693.b	ENSGT00940000160178	ENSGT00390000018547	ENSGT00940000159411.b	ENSGT00940000158764	ENSGT00940000163226	ENSGT00940000156091.b	ENSGT00390000011581	ENSGT00940000153776.a.b
Alpin marmot	MODERN SPECIES		ENSMMMG00000008844	RAB22A (ENSMMMG00000008862) #7	VAPB (ENSMMMG00000008874) #9	APCDD1L (ENSMMMG00000008880) #10	ENSMMMG00000008912 #11	NPEPL1 (ENSMMMG00000008927) #12	ENSMMMG00000008946	ENSMMMG00000008961 #13	ENSMMMG00000008996 #14	ENSMMMG00000013417	NELFCD (ENSMMMG00000013440) #15	CTSZ (ENSMMMG00000013461) #16	TUBB1 (ENSMMMG00000013513) #17	ENSMMMG00000013527 #19	ZNF831 (ENSMMMG00000013558) #21	EDN3 (ENSMMMG00000013570) #22	PKIG (ENSMMMG00000013597)	SERINC3 (ENSMMMG00000013611)	TTPAL (ENSMMMG00000013622)	HNF4A (ENSMMMG00000013628)	R3HDML (ENSMMMG00000013658)	FITM2 (ENSMMMG00000013666)	GDAP1L1 (ENSMMMG00000013671)	OSER1 (ENSMMMG00000013683)	ENSMMMG00000013694	TOX2 (ENSMMMG00000013708)	GTSF1L (ENSMMMG00000013745)	MYBL2 (ENSMMMG00000013751)	IFT52 (ENSMMMG00000013772)	SGK2 (ENSMMMG00000013793)	L3MBTL1 (ENSMMMG00000013828)
Marmotini_b	ANCESTRAL SPECIES	29	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B.n #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00960000189526	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.gb.a.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00950000183113.a.b	ENSGT00390000002707	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000155407	ENSGT00940000157965	ENSGT00940000161086	ENSGT00530000063693.b	ENSGT00940000160178	ENSGT00390000018547	ENSGT00940000159411.b	ENSGT00940000158764	ENSGT00940000163226	ENSGT00940000156091.b	ENSGT00390000011581	ENSGT00940000153776.a.b
Arctic ground squirrel	MODERN SPECIES	530	APCDD1L (ENSUPAG00010012543) #10	STX16 (ENSUPAG00010012517) #11	NPEPL1 (ENSUPAG00010012500) #12	ENSUPAG00010012495	ENSUPAG00010012486	ENSUPAG00010012481 #13	ENSUPAG00010012458	ENSUPAG00010012443	GNAS (ENSUPAG00010012379) #14	NELFCD (ENSUPAG00010012356) #15	CTSZ (ENSUPAG00010012349) #16	TUBB1 (ENSUPAG00010012345) #17	ATP5F1E (ENSUPAG00010012337) #18	PRELID3B (ENSUPAG00010012329) #19	ZNF831 (ENSUPAG00010012318) #21	EDN3 (ENSUPAG00010012292) #22
Squirrel	MODERN SPECIES	130	C20orf85 (ENSSTOG00000001088)	ANKRD60 (ENSSTOG00000025527)	RAB22A (ENSSTOG00000001120) #7	VAPB (ENSSTOG00000001129) #9	STX16 (ENSSTOG00000023815) #11	NPEPL1 (ENSSTOG00000012126) #12	ENSSTOG00000033348 #13	ENSSTOG00000003551	ENSSTOG00000026582	NELFCD (ENSSTOG00000011692) #15	CTSZ (ENSSTOG00000011704) #16	TUBB1 (ENSSTOG00000027296) #17	ATP5F1E (ENSSTOG00000032797) #18	ENSSTOG00000011707 #19	ZNF831 (ENSSTOG00000020220) #21	EDN3 (ENSSTOG00000012621) #22	ENSSTOG00000022041	ENSSTOG00000026859	PKIG (ENSSTOG00000015603)	SERINC3 (ENSSTOG00000015682)	TTPAL (ENSSTOG00000015677)	HNF4A (ENSSTOG00000020202)	R3HDML (ENSSTOG00000015652)	FITM2 (ENSSTOG00000029143)	GDAP1L1 (ENSSTOG00000015647)	OSER1 (ENSSTOG00000015641)	TOX2 (ENSSTOG00000015626)	MYBL2 (ENSSTOG00000010149)	IFT52 (ENSSTOG00000010141)	SGK2 (ENSSTOG00000010133)	ENSSTOG00000032451
Eurasian red squirrel	MODERN SPECIES	11	C20orf85 (ENSSVLG00005001802)	RAB22A (ENSSVLG00005001823) #7	VAPB (ENSSVLG00005001847) #9	STX16 (ENSSVLG00005001909) #11	NPEPL1 (ENSSVLG00005001996) #12	ENSSVLG00005002013 #13	GNAS (ENSSVLG00005002064) #14	ENSSVLG00005002163	ENSSVLG00005002195	NELFCD (ENSSVLG00005002237) #15	CTSZ (ENSSVLG00005002304) #16	TUBB1 (ENSSVLG00005002321) #17	ENSSVLG00005002334 #18	ENSSVLG00005002362 #19	ZNF831 (ENSSVLG00005002392) #21	EDN3 (ENSSVLG00005002438) #22	PHACTR3 (ENSSVLG00005002529) #23	ENSSVLG00005002613 #24	PPP1R3D (ENSSVLG00005002650) #25	ENSSVLG00005002662 #26	CDH4 (ENSSVLG00005002684) #29	TAF4 (ENSSVLG00005002767) #30	LSM14B (ENSSVLG00005002868) #31	ENSSVLG00005002918 #32	SS18L1 (ENSSVLG00005002951) #33	ENSSVLG00005002984 #34	HRH3 (ENSSVLG00005003009) #35	OSBPL2 (ENSSVLG00005003034) #36	ENSSVLG00005003084 #37	ENSSVLG00005003318	CABLES2 (ENSSVLG00005003344)
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00940000155271	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.s #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b.j
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.s #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00390000015137	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.s #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22
Long-tailed chinchilla	MODERN SPECIES	152	ENSCLAG00000006547	RAB22A (ENSCLAG00000005077) #7	ENSCLAG00000004633	VAPB (ENSCLAG00000012950) #9	STX16 (ENSCLAG00000008863) #11	NPEPL1 (ENSCLAG00000007179) #12	ENSCLAG00000007891 #13	ENSCLAG00000006989	ENSCLAG00000006517	NELFCD (ENSCLAG00000005892) #15	CTSZ (ENSCLAG00000004846) #16	TUBB1 (ENSCLAG00000004602) #17	ATP5F1E (ENSCLAG00000008048) #18	PRELID3B (ENSCLAG00000007144) #19	ZNF831 (ENSCLAG00000006267) #21	EDN3 (ENSCLAG00000007868) #22
Degu	MODERN SPECIES	337	RAB22A (ENSODEG00000000054) #7	ENSODEG00000018508	VAPB (ENSODEG00000000035) #9	STX16 (ENSODEG00000000389) #11	NPEPL1 (ENSODEG00000000364) #12	ENSODEG00000018581 #13	ENSODEG00000000331	ENSODEG00000000317	ENSODEG00000000305	ENSODEG00000000250 #15	ENSODEG00000000198 #16	TUBB1 (ENSODEG00000000178) #17	ATP5F1E (ENSODEG00000000169) #18	ENSODEG00000000152 #19	ZNF831 (ENSODEG00000000139) #21	ENSODEG00000000116 #22	ENSODEG00000018518
Guinea pig	MODERN SPECIES	156	ENSCPOG00000019351	RAB22A (ENSCPOG00000008172) #7	VAPB (ENSCPOG00000022834) #9	STX16 (ENSCPOG00000027307) #11	NPEPL1 (ENSCPOG00000009271) #12	ENSCPOG00000037318 #13	ENSCPOG00000009248	GNAS (ENSCPOG00000033190) #14	ENSCPOG00000030649	NELFCD (ENSCPOG00000008591) #15	CTSZ (ENSCPOG00000026091) #16	TUBB1 (ENSCPOG00000038009) #17	ATP5F1E (ENSCPOG00000030890) #18	PRELID3B (ENSCPOG00000030079) #19	ZNF831 (ENSCPOG00000004730) #21	EDN3 (ENSCPOG00000038386) #22
Naked mole-rat female	MODERN SPECIES	6	PCK1 (ENSHGLG00000018888)	C20orf85 (ENSHGLG00000019072)	ENSHGLG00000013351	RAB22A (ENSHGLG00000009337) #7	VAPB (ENSHGLG00000049133) #9	APCDD1L (ENSHGLG00000044632) #10	STX16 (ENSHGLG00000005872) #11	ENSHGLG00000005914 #14	ENSHGLG00000005981	ENSHGLG00000007894 #15	CTSZ (ENSHGLG00000050387) #16	TUBB1 (ENSHGLG00000007606) #17	ENSHGLG00000008231 #18	ENSHGLG00000009253 #19	ZNF831 (ENSHGLG00000010468) #21	EDN3 (ENSHGLG00000018677) #22	PPP1R3D (ENSHGLG00000033683) #25	ENSHGLG00000038944 #29	LSM14B (ENSHGLG00000015055) #31	ENSHGLG00000013634 #32	SS18L1 (ENSHGLG00000006752) #33	ENSHGLG00000049601 #34	ENSHGLG00000046738 #35	OSBPL2 (ENSHGLG00000015027) #36	ADRM1 (ENSHGLG00000005649) #37	RPS21 (ENSHGLG00000040061)	ENSHGLG00000044047	ENSHGLG00000040253	ENSHGLG00000006232	NTSR1 (ENSHGLG00000037154)	MRGBP (ENSHGLG00000042672)
Lagomorpha	ANCESTRAL SPECIES	163	ENSGT00940000154459.A	ENSGT00940000171528	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000261049	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000154543.a #26
Pika	MODERN SPECIES	5079										NPEPL1 (ENSOPRG00000002452) #12	ENSOPRG00000002482 #14	TUBB1 (ENSOPRG00000002529) #17	ATP5F1E (ENSOPRG00000002542) #18	PRELID3B (ENSOPRG00000002550) #19	ZNF831 (ENSOPRG00000002574) #21	ENSOPRG00000002619 #22
Rabbit	MODERN SPECIES	488					STX16 (ENSOCUG00000023365) #11	ENSOCUG00000033076	NPEPL1 (ENSOCUG00000012380) #12	ENSOCUG00000021234 #13	ENSOCUG00000017968 #14	ENSOCUG00000032342	NELFCD (ENSOCUG00000010406) #15	CTSZ (ENSOCUG00000010417) #16	TUBB1 (ENSOCUG00000029727) #17	ATP5F1E (ENSOCUG00000001042) #18	ZNF831 (ENSOCUG00000016865) #21	EDN3 (ENSOCUG00000025675) #22	PHACTR3 (ENSOCUG00000023377) #23	SYCP2 (ENSOCUG00000004037) #24	FAM217B (ENSOCUG00000021752) #26
Tree shrew	MODERN SPECIES	7890																ENSTBEG00000008235 #22
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183053.C #22
Hedgehog	MODERN SPECIES	15893																EDN3 (ENSEEUG00000014824) #22
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT01100000264672	ENSGT00940000156300.c.a ##14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00390000018145.wc.a.a	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853.l #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853.l #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a.j #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853.l #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a.j #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853.l #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a.j #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000168632 #27	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853.l #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Narwhal	MODERN SPECIES	299	C20orf85 (ENSMMNG00015004638)	RAB22A (ENSMMNG00015004617) #7	VAPB (ENSMMNG00015004608) #9	APCDD1L (ENSMMNG00015004601) #10	NPEPL1 (ENSMMNG00015004513) #12	ENSMMNG00015004407 #13	ENSMMNG00015004380	ENSMMNG00015004333 #14	ENSMMNG00015004284 #15	CTSZ (ENSMMNG00015004260) #16	TUBB1 (ENSMMNG00015004239) #17	ATP5F1E (ENSMMNG00015004225) #18	PRELID3B (ENSMMNG00015004211) #19	ENSMMNG00015004193	ZNF831 (ENSMMNG00015004179) #21	EDN3 (ENSMMNG00015004148) #22	ENSMMNG00015004125	PHACTR3 (ENSMMNG00015004056) #23	SYCP2 (ENSMMNG00015003943) #24	PPP1R3D (ENSMMNG00015003856) #25	FAM217B (ENSMMNG00015003840) #26	ENSMMNG00015003795 #27	CDH4 (ENSMMNG00015003737) #29	TAF4 (ENSMMNG00015003692) #30	LSM14B (ENSMMNG00015003641) #31	PSMA7 (ENSMMNG00015003566) #32	SS18L1 (ENSMMNG00015003519) #33	MTG2 (ENSMMNG00015003488) #34	HRH3 (ENSMMNG00015003462) #35	OSBPL2 (ENSMMNG00015003407) #36	ADRM1 (ENSMMNG00015003347) #37
Beluga whale	MODERN SPECIES	36	ENSDLEG00000001126 #7	VAPB (ENSDLEG00000001100) #9	APCDD1L (ENSDLEG00000001085) #10	STX16 (ENSDLEG00000001058) #11	NPEPL1 (ENSDLEG00000001024) #12	ENSDLEG00000001012 #13	ENSDLEG00000000999	ENSDLEG00000000970	GNAS (ENSDLEG00000000944) ##14	NELFCD (ENSDLEG00000000907) #15	CTSZ (ENSDLEG00000000883) #16	TUBB1 (ENSDLEG00000000861) #17	ENSDLEG00000000845 #18	PRELID3B (ENSDLEG00000000826) #19	ZNF831 (ENSDLEG00000000808) #21	EDN3 (ENSDLEG00000000784) #22	PHACTR3 (ENSDLEG00000000651) #23	SYCP2 (ENSDLEG00000000502) #24	PPP1R3D (ENSDLEG00000000434) #25	FAM217B (ENSDLEG00000000421) #26	CDH4 (ENSDLEG00000000382) #29	TAF4 (ENSDLEG00000000226) #30	LSM14B (ENSDLEG00000007209) #31	PSMA7 (ENSDLEG00000007179) #32	SS18L1 (ENSDLEG00000007157) #33	MTG2 (ENSDLEG00000007066) #34	HRH3 (ENSDLEG00000007062) #35	OSBPL2 (ENSDLEG00000007046) #36	ADRM1 (ENSDLEG00000007029) #37	LAMA5 (ENSDLEG00000006920)	RPS21 (ENSDLEG00000006898)
Vaquita	MODERN SPECIES	6	C20orf85 (ENSPSNG00000018366)	ENSPSNG00000018112	RAB22A (ENSPSNG00000018063) #7	VAPB (ENSPSNG00000018009) #9	APCDD1L (ENSPSNG00000017956) #10	STX16 (ENSPSNG00000017704) #11	NPEPL1 (ENSPSNG00000017505) #12	ENSPSNG00000017471 #13	ENSPSNG00000017316	ENSPSNG00000016734 #14	ENSPSNG00000016419 #15	CTSZ (ENSPSNG00000016349) #16	TUBB1 (ENSPSNG00000016273) #17	ENSPSNG00000016225 #18	PRELID3B (ENSPSNG00000016155) #19	EDN3 (ENSPSNG00000015678) #22	PHACTR3 (ENSPSNG00000015277) #23	ENSPSNG00000015007 #24	PPP1R3D (ENSPSNG00000014976) #25	FAM217B (ENSPSNG00000014948) #26	ENSPSNG00000014879 #27	CDH4 (ENSPSNG00000014451) #29	TAF4 (ENSPSNG00000013933) #30	LSM14B (ENSPSNG00000013767) #31	PSMA7 (ENSPSNG00000013641) #32	SS18L1 (ENSPSNG00000013560) #33	MTG2 (ENSPSNG00000013478) #34	HRH3 (ENSPSNG00000013409) #35	OSBPL2 (ENSPSNG00000013262) #36	ADRM1 (ENSPSNG00000013077) #37	ENSPSNG00000009820
Dolphin	MODERN SPECIES	153															ZNF831 (ENSTTRG00000009388) #21	EDN3 (ENSTTRG00000009405) #22
Sperm whale	MODERN SPECIES	5	RAE1 (ENSPCTG00005019375)	NPEPL1 (ENSPCTG00005019263) #12	STX16 (ENSPCTG00005019004) #11	APCDD1L (ENSPCTG00005018939) #10	VAPB (ENSPCTG00005018875) #9	RAB22A (ENSPCTG00005018849) #7	ANKRD60 (ENSPCTG00005018795)	ENSPCTG00005018682	GNAS (ENSPCTG00005018125) ##14	CTSZ (ENSPCTG00005018064) #16	NELFCD (ENSPCTG00005017957) #15	CTCFL (ENSPCTG00005017424)	PCK1 (ENSPCTG00005017262)	C14H20orf85 (ENSPCTG00005017200)	ZNF831 (ENSPCTG00005017120) #21	EDN3 (ENSPCTG00005016895) #22	PHACTR3 (ENSPCTG00005016503) #23	PPP1R3D (ENSPCTG00005015919) #25	FAM217B (ENSPCTG00005015882) #26	ENSPCTG00005015819 #27	CDH4 (ENSPCTG00005015443) #29	TAF4 (ENSPCTG00005015206) #30	LSM14B (ENSPCTG00005015013) #31	PSMA7 (ENSPCTG00005014933) #32	SS18L1 (ENSPCTG00005014758) #33	MTG2 (ENSPCTG00005014701) #34	HRH3 (ENSPCTG00005014655) #35	OSBPL2 (ENSPCTG00005014366) #36	ADRM1 (ENSPCTG00005014185) #37	ENSPCTG00005011426	CABLES2 (ENSPCTG00005011308)
Blue whale	MODERN SPECIES	6	ENSBMSG00010015546	RAB22A (ENSBMSG00010015517) #7	VAPB (ENSBMSG00010015477) #9	APCDD1L (ENSBMSG00010015438) #10	STX16 (ENSBMSG00010015262) #11	NPEPL1 (ENSBMSG00010015181) #12	ENSBMSG00010015157 #13	ENSBMSG00010015067	ENSBMSG00010014082 #14	ENSBMSG00010012230 #15	CTSZ (ENSBMSG00010012214) #16	TUBB1 (ENSBMSG00010012204) #17	ATP5F1E (ENSBMSG00010012196) #18	PRELID3B (ENSBMSG00010012185) #19	ZNF831 (ENSBMSG00010012169) #21	EDN3 (ENSBMSG00010012138) #22	PHACTR3 (ENSBMSG00010012068) #23	PPP1R3D (ENSBMSG00010012002) #25	FAM217B (ENSBMSG00010011998) #26	ENSBMSG00010011984 #27	CDH4 (ENSBMSG00010011951) #29	TAF4 (ENSBMSG00010011906) #30	LSM14B (ENSBMSG00010011814) #31	PSMA7 (ENSBMSG00010011783) #32	SS18L1 (ENSBMSG00010011768) #33	MTG2 (ENSBMSG00010011756) #34	HRH3 (ENSBMSG00010011747) #35	OSBPL2 (ENSBMSG00010011717) #36	ADRM1 (ENSBMSG00010011687) #37	RPS21 (ENSBMSG00010011407)	ENSBMSG00010011386
Pecora	ANCESTRAL SPECIES	9	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00390000018145.wc.a.a	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Yarkand deer	MODERN SPECIES	15	C20orf85 (ENSCHYG00000018025)	RAB22A (ENSCHYG00000017863) #7	VAPB (ENSCHYG00000017763) #9	APCDD1L (ENSCHYG00000017700) #10	STX16 (ENSCHYG00000017190) #11	NPEPL1 (ENSCHYG00000016856) #12	ENSCHYG00000016747	ENSCHYG00000016641	ENSCHYG00000016008 #14	ENSCHYG00000015411 #15	CTSZ (ENSCHYG00000015333) #16	TUBB1 (ENSCHYG00000015260) #17	ENSCHYG00000015158 #18	PRELID3B (ENSCHYG00000014946) #19	ZNF831 (ENSCHYG00000014868) #21	EDN3 (ENSCHYG00000014695) #22	PHACTR3 (ENSCHYG00000014507) #23	SYCP2 (ENSCHYG00000014285) #24	PPP1R3D (ENSCHYG00000014208) #25	ENSCHYG00000014153 #26	CDH26 (ENSCHYG00000013755)	ENSCHYG00000013703	CDH4 (ENSCHYG00000025855) #29	TAF4 (ENSCHYG00000025826) #30	LSM14B (ENSCHYG00000025784) #31	PSMA7 (ENSCHYG00000025756) #32	SS18L1 (ENSCHYG00000025661) #33	MTG2 (ENSCHYG00000025616) #34	HRH3 (ENSCHYG00000025598) #35	OSBPL2 (ENSCHYG00000025489) #36	ADRM1 (ENSCHYG00000025424) #37
Percora_a	ANCESTRAL SPECIES	10	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Bovidae	ANCESTRAL SPECIES	10	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.b #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Caprinae	ANCESTRAL SPECIES	21	ENSGT00940000154459.A	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.a.b #18	ENSGT00950000182810.A.a.a.r.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32
Rambouillet Sheep	MODERN SPECIES	4	PMEPA1 (ENSOARG00020013298)	C20orf85 (ENSOARG00020013218)	RAB22A (ENSOARG00020013056) #7	VAPB (ENSOARG00020012959) #9	APCDD1L (ENSOARG00020012926) #10	STX16 (ENSOARG00020012241) #11	NPEPL1 (ENSOARG00020012021) #12	ENSOARG00020011940	ENSOARG00020011802	ENSOARG00020010739 #14	NELFCD (ENSOARG00020010385) #15	CTSZ (ENSOARG00020010226) #16	TUBB1 (ENSOARG00020010178) #17	ENSOARG00020010128 #18	PRELID3B (ENSOARG00020010008) #19	EDN3 (ENSOARG00020009904) #22	PHACTR3 (ENSOARG00020009712) #23	SYCP2 (ENSOARG00020007921) #24	PPP1R3D (ENSOARG00020007845) #25	FAM217B (ENSOARG00020007830) #26	CDH26 (ENSOARG00020007709)	CDH4 (ENSOARG00020007577) #29	TAF4 (ENSOARG00020007283) #30	ENSOARG00020007136 #31	PSMA7 (ENSOARG00020007065) #32	SS18L1 (ENSOARG00020006781) #33	MTG2 (ENSOARG00020006674) #34	HRH3 (ENSOARG00020006602) #35	OSBPL2 (ENSOARG00020006432) #36	ADRM1 (ENSOARG00020006278) #37	LAMA5 (ENSOARG00020005901)
Goat	MODERN SPECIES	4	C20orf85 (ENSCHIG00000013954)	RAB22A (ENSCHIG00000017305) #7	VAPB (ENSCHIG00000023510) #9	APCDD1L (ENSCHIG00000008762) #10	STX16 (ENSCHIG00000015266) #11	NPEPL1 (ENSCHIG00000020605) #12	ENSCHIG00000004449 #13	ENSCHIG00000013806	GNAS (ENSCHIG00000011782) #14	ENSCHIG00000021753 #15	CTSZ (ENSCHIG00000011423) #16	TUBB1 (ENSCHIG00000025696) #17	ENSCHIG00000023373 #18	ENSCHIG00000013750 #19	ZNF831 (ENSCHIG00000026441) #21	EDN3 (ENSCHIG00000017167) #22	PHACTR3 (ENSCHIG00000021023) #23	SYCP2 (ENSCHIG00000013442) #24	PPP1R3D (ENSCHIG00000012459) #25	FAM217B (ENSCHIG00000011525) #26	CDH26 (ENSCHIG00000027057)	CDH4 (ENSCHIG00000007626) #29	TAF4 (ENSCHIG00000012545) #30	ENSCHIG00000010284 #31	PSMA7 (ENSCHIG00000014692) #32	SS18L1 (ENSCHIG00000024560) #33	MTG2 (ENSCHIG00000022564) #34	HRH3 (ENSCHIG00000006885) #35	OSBPL2 (ENSCHIG00000021852) #36	ADRM1 (ENSCHIG00000015510) #37	LAMA5 (ENSCHIG00000011048)
Bovinae	ANCESTRAL SPECIES	23	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.b #18	ENSGT00950000182810.A.a.a.o.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562.e #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695.g #32
Bos	ANCESTRAL SPECIES	24	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.b.d #18	ENSGT00950000182810.A.a.a.o.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562.e #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695.g #32
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000154459.A	ENSGT00390000015137	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.b.d #18	ENSGT00950000182810.A.a.a.o.a #19	ENSGT00950000183053.C #22	ENSGT00940000157562.e #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695.g #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Domestic yak	MODERN SPECIES	3	ZBP1 (ENSBGRG00000009247)	PMEPA1 (ENSBGRG00000009167)	C20orf85 (ENSBGRG00000009150)	RAB22A (ENSBGRG00000008900) #7	VAPB (ENSBGRG00000008788) #9	APCDD1L (ENSBGRG00000008754) #10	STX16 (ENSBGRG00000008482) #11	NPEPL1 (ENSBGRG00000008119) #12	ENSBGRG00000025497	ENSBGRG00000025028 #14	ENSBGRG00000024898 #15	CTSZ (ENSBGRG00000024860) #16	TUBB1 (ENSBGRG00000024823) #17	ENSBGRG00000024809 #18	ENSBGRG00000024759 #19	EDN3 (ENSBGRG00000024625) #22	ENSBGRG00000024502 #23	ENSBGRG00000024487	SYCP2 (ENSBGRG00000024249) #24	PPP1R3D (ENSBGRG00000024222) #25	FAM217B (ENSBGRG00000024168) #26	CDH26 (ENSBGRG00000024093)	CDH4 (ENSBGRG00000023355) #29	TAF4 (ENSBGRG00000023255) #30	LSM14B (ENSBGRG00000023122) #31	ENSBGRG00000023084 #32	SS18L1 (ENSBGRG00000022962) #33	MTG2 (ENSBGRG00000022940) #34	HRH3 (ENSBGRG00000022906) #35	OSBPL2 (ENSBGRG00000022810) #36	ADRM1 (ENSBGRG00000022694) #37
Wild yak	MODERN SPECIES	2775										GNAS (ENSBMUG00000019511) #14	ENSBMUG00000019472 #15	CTSZ (ENSBMUG00000019420) #16	TUBB1 (ENSBMUG00000019392) #17	ENSBMUG00000019377 #18	ENSBMUG00000019361 #19	EDN3 (ENSBMUG00000019294) #22	ENSBMUG00000019258 #23	SYCP2 (ENSBMUG00000019161) #24	PPP1R3D (ENSBMUG00000019122) #25	FAM217B (ENSBMUG00000019112) #26	CDH26 (ENSBMUG00000019100)
Bos_b	ANCESTRAL SPECIES	26	ENSGT00940000154459.A	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799.i.a #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470.m.b.b.d #18	ENSGT00950000182810.A.a.a.o.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562.e #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695.g #32
Hybrid Bos Indicus	MODERN SPECIES	4	RAB22A (ENSBIXG00005022726) #7	ENSBIXG00005022707	VAPB (ENSBIXG00005022698) #9	APCDD1L (ENSBIXG00005006835) #10	STX16 (ENSBIXG00005007169) #11	NPEPL1 (ENSBIXG00005022589) #12	ENSBIXG00005022467 #13	ENSBIXG00005022358 #14	ENSBIXG00005022205	ENSBIXG00005022164 #15	CTSZ (ENSBIXG00005022102) #16	TUBB1 (ENSBIXG00005003743) #17	ENSBIXG00005003739 #18	PRELID3B (ENSBIXG00005022046) #19	ZNF831 (ENSBIXG00005007218) #21	EDN3 (ENSBIXG00005021971) #22	ENSBIXG00005021908 #23	SYCP2 (ENSBIXG00005021751) #24	ENSBIXG00005000007	PPP1R3D (ENSBIXG00005000015) #25	ENSBIXG00005021566 #26	CDH26 (ENSBIXG00005003632)	CDH4 (ENSBIXG00005021467) #29	TAF4 (ENSBIXG00005021394) #30	OSBPL2 (ENSBIXG00005021374) #36	LSM14B (ENSBIXG00005021304) #31	ENSBIXG00005021267 #32	SS18L1 (ENSBIXG00005021240) #33	MTG2 (ENSBIXG00005021227) #34	HRH3 (ENSBIXG00005007067) #35	ADRM1 (ENSBIXG00005003573) #37
Cow	MODERN SPECIES	4	ENSBTAG00000052305	RAB22A (ENSBTAG00000018053) #7	VAPB (ENSBTAG00000017424) #9	APCDD1L (ENSBTAG00000020397) #10	STX16 (ENSBTAG00000003872) #11	NPEPL1 (ENSBTAG00000016724) #12	ENSBTAG00000017475	GNAS (ENSBTAG00000047223) #13	GNAS (ENSBTAG00000052413) #14	NELFCD (ENSBTAG00000018783) #15	CTSZ (ENSBTAG00000018784) #16	TUBB1 (ENSBTAG00000018785) #17	ATP5F1E (ENSBTAG00000039208) #18	PRELID3B (ENSBTAG00000004402) #19	ZNF831 (ENSBTAG00000011940) #21	EDN3 (ENSBTAG00000012109) #22	PHACTR3 (ENSBTAG00000015080) #23	SYCP2 (ENSBTAG00000003608) #24	PPP1R3D (ENSBTAG00000027397) #25	FAM217B (ENSBTAG00000045509) #26	CDH26 (ENSBTAG00000020261)	CDH4 (ENSBTAG00000015058) #29	TAF4 (ENSBTAG00000047991) #30	LSM14B (ENSBTAG00000021558) #31	PSMA7 (ENSBTAG00000005127) #32	SS18L1 (ENSBTAG00000014438) #33	MTG2 (ENSBTAG00000014442) #34	HRH3 (ENSBTAG00000031625) #35	OSBPL2 (ENSBTAG00000017402) #36	ADRM1 (ENSBTAG00000003058) #37	LAMA5 (ENSBTAG00000003061)
American bison	MODERN SPECIES	3089	C20orf85 (ENSBBBG00000000233)	ANKRD60 (ENSBBBG00000024644)	RAB22A (ENSBBBG00000006430) #7	VAPB (ENSBBBG00000024624) #9	APCDD1L (ENSBBBG00000000252) #10	STX16 (ENSBBBG00000009035) #11	NPEPL1 (ENSBBBG00000024507) #12	ENSBBBG00000024413 #13	ENSBBBG00000024382 #14	ENSBBBG00000008650	ENSBBBG00000024184 #15	CTSZ (ENSBBBG00000008647) #16	TUBB1 (ENSBBBG00000024089) #17	ENSBBBG00000024085 #18	ENSBBBG00000024074 #19	EDN3 (ENSBBBG00000008863) #22	ENSBBBG00000023967 #23	ENSBBBG00000023882 #24	PPP1R3D (ENSBBBG00000023860) #25	FAM217B (ENSBBBG00000008802) #26	CDH26 (ENSBBBG00000008691)	CDH4 (ENSBBBG00000023802) #29	TAF4 (ENSBBBG00000023791) #30	LSM14B (ENSBBBG00000023774) #31	ENSBBBG00000023734 #32	SS18L1 (ENSBBBG00000023728) #33	MTG2 (ENSBBBG00000023710) #34	ENSBBBG00000008484 #35	OSBPL2 (ENSBBBG00000023688) #36	ADRM1 (ENSBBBG00000023624) #37	LAMA5 (ENSBBBG00000023435)
Siberian musk deer	MODERN SPECIES	1193	ENSMMSG00000021183 #7	VAPB (ENSMMSG00000021218) #9	APCDD1L (ENSMMSG00000017381) #10	STX16 (ENSMMSG00000017425) #11	NPEPL1 (ENSMMSG00000017675) #12	ENSMMSG00000017768 #13	ENSMMSG00000017849 #14	ENSMMSG00000018427	ENSMMSG00000018476 #15	CTSZ (ENSMMSG00000018517) #16	TUBB1 (ENSMMSG00000018536) #17	ENSMMSG00000018608	ENSMMSG00000018619 #18	PRELID3B (ENSMMSG00000018651) #19	ZNF831 (ENSMMSG00000018706) #21	EDN3 (ENSMMSG00000018744) #22	PHACTR3 (ENSMMSG00000018838) #23	ENSMMSG00000019309	PPP1R3D (ENSMMSG00000019328) #25	FAM217B (ENSMMSG00000019344) #26	CDH26 (ENSMMSG00000019362)	CDH4 (ENSMMSG00000019459) #29	TAF4 (ENSMMSG00000019546) #30	LSM14B (ENSMMSG00000019784) #31	PSMA7 (ENSMMSG00000019883) #32	SS18L1 (ENSMMSG00000019914) #33	MTG2 (ENSMMSG00000019960) #34	HRH3 (ENSMMSG00000019990) #35	OSBPL2 (ENSMMSG00000020018) #36	ADRM1 (ENSMMSG00000020092) #37	LAMA5 (ENSMMSG00000020211)
Camelidae	ANCESTRAL SPECIES	10	ENSGT00940000154459.A	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00530000063859.b #24	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00390000013839 #37	ENSGT00390000017515.o.b	ENSGT00400000022086.b.b
Arabian camel	MODERN SPECIES	10	C20orf85 (ENSCDRG00005018603)	RAB22A (ENSCDRG00005018654) #7	VAPB (ENSCDRG00005018685) #9	APCDD1L (ENSCDRG00005018710) #10	STX16 (ENSCDRG00005018768) #11	NPEPL1 (ENSCDRG00005019177) #12	ENSCDRG00005019259 #13	GNAS (ENSCDRG00005019285) #14	ENSCDRG00005019549	NELFCD (ENSCDRG00005019582) #15	CTSZ (ENSCDRG00005019619) #16	TUBB1 (ENSCDRG00005019625) #17	ATP5F1E (ENSCDRG00005019637) #18	PRELID3B (ENSCDRG00005019644) #19	ZNF831 (ENSCDRG00005019675) #21	EDN3 (ENSCDRG00005003447) #22	PHACTR3 (ENSCDRG00005003583) #23	PPP1R3D (ENSCDRG00005004276) #25	ENSCDRG00005004290 #26	CDH26 (ENSCDRG00005004313)	CDH4 (ENSCDRG00005004411) #29	TAF4 (ENSCDRG00005004789) #30	LSM14B (ENSCDRG00005004926) #31	PSMA7 (ENSCDRG00005004975) #32	SS18L1 (ENSCDRG00005005016) #33	MTG2 (ENSCDRG00005005059) #34	HRH3 (ENSCDRG00005005077) #35	ADRM1 (ENSCDRG00005005112) #37	RPS21 (ENSCDRG00005006197)	ENSCDRG00005006256	GATA5 (ENSCDRG00005006581)
Alpaca	MODERN SPECIES	186																ENSVPAG00000007939 #22
Suina	ANCESTRAL SPECIES	9	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b
Pig	MODERN SPECIES	8	ENSSSCG00000007512	RAB22A (ENSSSCG00000007513) #7	VAPB (ENSSSCG00000007514) #9	APCDD1L (ENSSSCG00000007515) #10	STX16 (ENSSSCG00000007516) #11	NPEPL1 (ENSSSCG00000007517) #12	ENSSSCG00000007520 #14	ENSSSCG00000058036	ENSSSCG00000032457	NELFCD (ENSSSCG00000007521) #15	CTSZ (ENSSSCG00000007522) #16	TUBB1 (ENSSSCG00000007523) #17	ENSSSCG00000060915 #18	ENSSSCG00000007525 #19	ZNF831 (ENSSSCG00000007526) #21	ENSSSCG00000007527 #22	PHACTR3 (ENSSSCG00000007528) #23	SYCP2 (ENSSSCG00000007529) #24	PPP1R3D (ENSSSCG00000007530) #25	FAM217B (ENSSSCG00000007531) #26	CDH4 (ENSSSCG00000025784) #29	ENSSSCG00000046508	TAF4 (ENSSSCG00000024694) #30	LSM14B (ENSSSCG00000026052) #31	PSMA7 (ENSSSCG00000033332) #32	SS18L1 (ENSSSCG00000035448) #33	MTG2 (ENSSSCG00000037369) #34	HRH3 (ENSSSCG00000038578) #35	OSBPL2 (ENSSSCG00000036835) #36	ADRM1 (ENSSSCG00000038718) #37	LAMA5 (ENSSSCG00000032761)
Chacoan peccary	MODERN SPECIES	802							ENSCWAG00000016469 #13	ENSCWAG00000015871 #14	NELFCD (ENSCWAG00000015709) #15	CTSZ (ENSCWAG00000015667) #16	TUBB1 (ENSCWAG00000015631) #17	ATP5F1E (ENSCWAG00000015591) #18	ENSCWAG00000015538 #19	ENSCWAG00000015516	ZNF831 (ENSCWAG00000015450) #21	ENSCWAG00000015406 #22	PHACTR3 (ENSCWAG00000015076) #23	SYCP2 (ENSCWAG00000014753) #24	PPP1R3D (ENSCWAG00000014732) #25	FAM217B (ENSCWAG00000014716) #26
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT01100000264672	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT01100000264672	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b	ENSGT00400000022086.b.b	ENSGT00530000063835.a
Caniformia	ANCESTRAL SPECIES		ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT01100000264672	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b	ENSGT00400000022086.b.b	ENSGT00530000063835.a
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT01100000264672	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Ursidae	ANCESTRAL SPECIES	14	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695.d #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00940000156537	ENSGT00390000017515.o.b.x
Ursus	ANCESTRAL SPECIES	152	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22
American black bear	MODERN SPECIES	3347																EDN3 (ENSUAMG00000024951) #22
Polar bear	MODERN SPECIES	219	C20orf85 (ENSUMAG00000002586)	ENSUMAG00000002566	RAB22A (ENSUMAG00000002535) #7	VAPB (ENSUMAG00000002503) #9	APCDD1L (ENSUMAG00000002494) #10	STX16 (ENSUMAG00000002487) #11	NPEPL1 (ENSUMAG00000002343) #12	ENSUMAG00000002311 #13	ENSUMAG00000002284	GNAS (ENSUMAG00000001226) #14	NELFCD (ENSUMAG00000001113) #15	CTSZ (ENSUMAG00000001082) #16	TUBB1 (ENSUMAG00000001065) #17	PRELID3B (ENSUMAG00000001054) #19	ZNF831 (ENSUMAG00000001040) #21	EDN3 (ENSUMAG00000001027) #22
Giant Panda	MODERN SPECIES	4	ENSAMEG00000012659	RAB22A (ENSAMEG00000012646) #7	VAPB (ENSAMEG00000012630) #9	APCDD1L (ENSAMEG00000030490) #10	STX16 (ENSAMEG00000012597) #11	NPEPL1 (ENSAMEG00000012570) #12	ENSAMEG00000019810 #13	ENSAMEG00000024248	ENSAMEG00000031308 #14	NELFCD (ENSAMEG00000012493) #15	CTSZ (ENSAMEG00000012483) #16	ENSAMEG00000028999 #17	ATP5F1E (ENSAMEG00000019808) #18	PRELID3B (ENSAMEG00000012470) #19	ZNF831 (ENSAMEG00000028490) #21	EDN3 (ENSAMEG00000012458) #22	PHACTR3 (ENSAMEG00000027213) #23	SYCP2 (ENSAMEG00000012412) #24	CDH26 (ENSAMEG00000012384)	CDH4 (ENSAMEG00000012866) #29	TAF4 (ENSAMEG00000024016) #30	LSM14B (ENSAMEG00000013430) #31	PSMA7 (ENSAMEG00000013451) #32	SS18L1 (ENSAMEG00000013466) #33	MTG2 (ENSAMEG00000026455) #34	HRH3 (ENSAMEG00000013427) #35	ENSAMEG00000013512 #36	ENSAMEG00000024061	ENSAMEG00000017392	RBBP8NL (ENSAMEG00000017386)	GATA5 (ENSAMEG00000028627)
Mustelinae	ANCESTRAL SPECIES	58	ENSGT00940000157009 #7	ENSGT00950000183066.a.b.a.b	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT01100000264672	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000154543.a #26	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537	ENSGT00390000017515.o.b	ENSGT00400000022086.b.b
American mink	MODERN SPECIES	82	ENSNVIG00000022126	RB22A (ENSNVIG00000022120) #7	VAPB (ENSNVIG00000022108) #9	APCDD1L (ENSNVIG00000022092) #10	STX16 (ENSNVIG00000022063) #11	NPEPL1 (ENSNVIG00000022000) #12	ENSNVIG00000021981 #13	ENSNVIG00000021954	ENSNVIG00000021887 #14	NELFCD (ENSNVIG00000021864) #15	CTSZ (ENSNVIG00000021856) #16	TUBB1 (ENSNVIG00000021841) #17	ENSNVIG00000021833 #18	ENSNVIG00000021823 #19	ZNF831 (ENSNVIG00000021814) #21	EDN3 (ENSNVIG00000021795) #22	PHACTR3 (ENSNVIG00000021744) #23	SYCP2 (ENSNVIG00000021662) #24	FAM217B (ENSNVIG00000021647) #26	CDH4 (ENSNVIG00000021602) #29	TAF4 (ENSNVIG00000021480) #30	LSM14B (ENSNVIG00000021449) #31	PSMA7 (ENSNVIG00000021436) #32	SS18L1 (ENSNVIG00000021432) #33	MTG2 (ENSNVIG00000021425) #34	HRH3 (ENSNVIG00000021366) #35	OSBPL2 (ENSNVIG00000021309) #36	ADRM1 (ENSNVIG00000021284) #37	LAMA5 (ENSNVIG00000020229)	RPS21 (ENSNVIG00000020157)	CABLES2 (ENSNVIG00000020141)
Canidae	ANCESTRAL SPECIES	41	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000165887	ENSGT00940000156300.d #14	ENSGT01090000260114	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Dingo	MODERN SPECIES	343	RAB22A (ENSCAFG00020022020) #7	VAPB (ENSCAFG00020022022) #9	APCDD1L (ENSCAFG00020022024) #10	STX16 (ENSCAFG00020022029) #11	NPEPL1 (ENSCAFG00020022035) #12	ENSCAFG00020022038 #13	ENSCAFG00020022044	GNAS (ENSCAFG00020022045) #14	ENSCAFG00020022047	NELFCD (ENSCAFG00020022050) #15	CTSZ (ENSCAFG00020022056) #16	TUBB1 (ENSCAFG00020022060) #17	ATP5F1E (ENSCAFG00020022064) #18	PRELID3B (ENSCAFG00020022066) #19	ZNF831 (ENSCAFG00020022068) #21	EDN3 (ENSCAFG00020022074) #22	PHACTR3 (ENSCAFG00020022081) #23	FAM217B (ENSCAFG00020022109) #26	CDH26 (ENSCAFG00020022110)	CDH4 (ENSCAFG00020022116) #29	TAF4 (ENSCAFG00020022127) #30	LSM14B (ENSCAFG00020022150) #31	PSMA7 (ENSCAFG00020022159) #32	SS18L1 (ENSCAFG00020022196) #33	MTG2 (ENSCAFG00020022198) #34	HRH3 (ENSCAFG00020022208) #35	OSBPL2 (ENSCAFG00020000096) #36	ADRM1 (ENSCAFG00020000118) #37	ENSCAFG00020000144	ENSCAFG00020000870	CABLES2 (ENSCAFG00020000888)
Dog	MODERN SPECIES	16	C24H20orf85 (ENSCAFG00845013121)	ENSCAFG00845013178	RAB22A (ENSCAFG00845013330) #7	VAPB (ENSCAFG00845013414) #9	APCDD1L (ENSCAFG00845013480) #10	STX16 (ENSCAFG00845013527) #11	NPEPL1 (ENSCAFG00845013592) #12	GNAS (ENSCAFG00845013733) #14	ENSCAFG00845013928	NELFCD (ENSCAFG00845013969) #15	CTSZ (ENSCAFG00845014050) #16	TUBB1 (ENSCAFG00845014111) #17	ATP5F1E (ENSCAFG00845014129) #18	PRELID3B (ENSCAFG00845014151) #19	ZNF831 (ENSCAFG00845014176) #21	EDN3 (ENSCAFG00845014217) #22	PHACTR3 (ENSCAFG00845014288) #23	SYCP2 (ENSCAFG00845014669) #24	PPP1R3D (ENSCAFG00845015533) #25	ENSCAFG00845015558 #26	CDH26 (ENSCAFG00845015611)	CDH4 (ENSCAFG00845015748) #29	TAF4 (ENSCAFG00845015879) #30	LSM14B (ENSCAFG00845015999) #31	ENSCAFG00845016116 #32	SS18L1 (ENSCAFG00845016170) #33	MTG2 (ENSCAFG00845016227) #34	HRH3 (ENSCAFG00845016267) #35	OSBPL2 (ENSCAFG00845016342) #36	ADRM1 (ENSCAFG00845016538) #37	RPS21 (ENSCAFG00845016932)
Red fox	MODERN SPECIES	108	ENSVVUG00000017120	RAB22A (ENSVVUG00000017111) #7	VAPB (ENSVVUG00000017103) #9	APCDD1L (ENSVVUG00000017099) #10	STX16 (ENSVVUG00000017086) #11	NPEPL1 (ENSVVUG00000016881) #12	ENSVVUG00000016854 #13	ENSVVUG00000016833	GNAS (ENSVVUG00000016830) #14	NELFCD (ENSVVUG00000016260) #15	CTSZ (ENSVVUG00000016198) #16	TUBB1 (ENSVVUG00000016193) #17	ATP5F1E (ENSVVUG00000016192) #18	PRELID3B (ENSVVUG00000016188) #19	ZNF831 (ENSVVUG00000016165) #21	EDN3 (ENSVVUG00000016155) #22	PHACTR3 (ENSVVUG00000016145) #23	SYCP2 (ENSVVUG00000016091) #24	PPP1R3D (ENSVVUG00000016077) #25	ENSVVUG00000016075 #26	CDH26 (ENSVVUG00000016039)	CDH4 (ENSVVUG00000016015) #29	TAF4 (ENSVVUG00000015939) #30	LSM14B (ENSVVUG00000015920) #31	PSMA7 (ENSVVUG00000015857) #32	SS18L1 (ENSVVUG00000015825) #33	MTG2 (ENSVVUG00000015810) #34	HRH3 (ENSVVUG00000015800) #35	OSBPL2 (ENSVVUG00000015789) #36	ADRM1 (ENSVVUG00000015782) #37	ENSVVUG00000015503
Felidae	ANCESTRAL SPECIES	3	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.g #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00930000152812	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.g #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00930000152812	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.g #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00930000152812	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
lion	MODERN SPECIES	3	ENSPLOG00000011220	RAB22A (ENSPLOG00000011258) #7	VAPB (ENSPLOG00000011298) #9	APCDD1L (ENSPLOG00000011344) #10	STX16 (ENSPLOG00000011475) #11	NPEPL1 (ENSPLOG00000011712) #12	ENSPLOG00000011837 #13	ENSPLOG00000011944 #14	ENSPLOG00000012427	NELFCD (ENSPLOG00000012546) #15	CTSZ (ENSPLOG00000012619) #16	TUBB1 (ENSPLOG00000012649) #17	ATP5F1E (ENSPLOG00000012683) #18	PRELID3B (ENSPLOG00000012723) #19	ZNF831 (ENSPLOG00000012771) #21	EDN3 (ENSPLOG00000012864) #22	PHACTR3 (ENSPLOG00000013025) #23	SYCP2 (ENSPLOG00000013329) #24	PPP1R3D (ENSPLOG00000013873) #25	FAM217B (ENSPLOG00000013894) #26	CDH26 (ENSPLOG00000013915)	ENSPLOG00000014104	ENSPLOG00000014142	CDH4 (ENSPLOG00000014187) #29	TAF4 (ENSPLOG00000014564) #30	LSM14B (ENSPLOG00000014849) #31	PSMA7 (ENSPLOG00000014943) #32	SS18L1 (ENSPLOG00000015011) #33	MTG2 (ENSPLOG00000015109) #34	HRH3 (ENSPLOG00000015155) #35	OSBPL2 (ENSPLOG00000015228) #36
leopard	MODERN SPECIES	105	ANKRD60 (ENSPPRG00000013649)	ENSPPRG00000015746	RAB22A (ENSPPRG00000016807) #7	VAPB (ENSPPRG00000017621) #9	APCDD1L (ENSPPRG00000020729) #10	STX16 (ENSPPRG00000000547) #11	NPEPL1 (ENSPPRG00000002805) #12	ENSPPRG00000016818 #13	ENSPPRG00000003473	ENSPPRG00000007770 #14	NELFCD (ENSPPRG00000008415) #15	CTSZ (ENSPPRG00000010021) #16	TUBB1 (ENSPPRG00000011192) #17	ENSPPRG00000011697 #18	PRELID3B (ENSPPRG00000012981) #19	EDN3 (ENSPPRG00000014380) #22	PHACTR3 (ENSPPRG00000022438) #23	SYCP2 (ENSPPRG00000000712) #24	PPP1R3D (ENSPPRG00000017666) #25	CDH26 (ENSPPRG00000001923)	ENSPPRG00000003048	CDH4 (ENSPPRG00000007638) #29	TAF4 (ENSPPRG00000007879) #30	LSM14B (ENSPPRG00000009197) #31	PSMA7 (ENSPPRG00000009414) #32	SS18L1 (ENSPPRG00000010006) #33	MTG2 (ENSPPRG00000010251) #34	HRH3 (ENSPPRG00000013350) #35	OSBPL2 (ENSPPRG00000018989) #36	ADRM1 (ENSPPRG00000020760) #37	RPS21 (ENSPPRG00000004689)
Cat	MODERN SPECIES	2	ANKRD60 (ENSFCAG00000041149)	ENSFCAG00000019082	RAB22A (ENSFCAG00000046416) #7	VAPB (ENSFCAG00000009291) #9	APCDD1L (ENSFCAG00000009293) #10	STX16 (ENSFCAG00000033013) #11	NPEPL1 (ENSFCAG00000030941) #12	ENSFCAG00000016337 #13	ENSFCAG00000037901	ENSFCAG00000034898 #14	CTSZ (ENSFCAG00000000845) #16	TUBB1 (ENSFCAG00000014627) #17	PRELID3B (ENSFCAG00000031431) #19	NELFCD (ENSFCAG00000000844) #15	ZNF831 (ENSFCAG00000000850) #21	EDN3 (ENSFCAG00000046428) #22	PHACTR3 (ENSFCAG00000005126) #23	SYCP2 (ENSFCAG00000005127) #24	PPP1R3D (ENSFCAG00000031527) #25	FAM217B (ENSFCAG00000005128) #26	CDH26 (ENSFCAG00000005129)	TETY1 (ENSFCAG00000036141)	CDH4 (ENSFCAG00000011987) #29	TAF4 (ENSFCAG00000011994) #30	LSM14B (ENSFCAG00000003248) #31	PSMA7 (ENSFCAG00000003249) #32	SS18L1 (ENSFCAG00000018839) #33	MTG2 (ENSFCAG00000003250) #34	HRH3 (ENSFCAG00000026486) #35	OSBPL2 (ENSFCAG00000003247) #36	LAMA5 (ENSFCAG00000018350)
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00390000015137	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.e #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00390000015137	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a.e #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37	ENSGT00940000156537
Greater horseshoe bat	MODERN SPECIES	15	C20orf85 (ENSRFEG00010021221)	ANKRD60 (ENSRFEG00010021217)	ENSRFEG00010021190	RAB22A (ENSRFEG00010021173) #7	VAPB (ENSRFEG00010021154) #9	APCDD1L (ENSRFEG00010021146) #10	NPEPL1 (ENSRFEG00010021063) #12	ENSRFEG00010021007	ENSRFEG00010020869 #14	NELFCD (ENSRFEG00010020786) #15	CTSZ (ENSRFEG00010020760) #16	TUBB1 (ENSRFEG00010020749) #17	ATP5F1E (ENSRFEG00010020727) #18	ENSRFEG00010020690 #19	ZNF831 (ENSRFEG00010020646) #21	EDN3 (ENSRFEG00010020608) #22	PHACTR3 (ENSRFEG00010020491) #23	SYCP2 (ENSRFEG00010020278) #24	PPP1R3D (ENSRFEG00010020266) #25	FAM217B (ENSRFEG00010020258) #26	CDH26 (ENSRFEG00010020152)	CDH4 (ENSRFEG00010020057) #29	TAF4 (ENSRFEG00010019851) #30	LSM14B (ENSRFEG00010019740) #31	PSMA7 (ENSRFEG00010019679) #32	SS18L1 (ENSRFEG00010019636) #33	MTG2 (ENSRFEG00010019620) #34	HRH3 (ENSRFEG00010019606) #35	OSBPL2 (ENSRFEG00010019536) #36	ADRM1 (ENSRFEG00010019448) #37	RPS21 (ENSRFEG00010018046)
Microbat	MODERN SPECIES	1437								NELFCD (ENSMLUG00000014890) #15	CTSZ (ENSMLUG00000014895) #16	TUBB1 (ENSMLUG00000014902) #17	ATP5F1E (ENSMLUG00000014905) #18	ENSMLUG00000014907 #19	ENSMLUG00000028599	ENSMLUG00000024419	ZNF831 (ENSMLUG00000002710) #21	ENSMLUG00000028513 #22
Megabat	MODERN SPECIES	3678														PRELID3B (ENSPVAG00000005226) #19	ZNF831 (ENSPVAG00000005227) #21	ENSPVAG00000005228 #22
Equus	ANCESTRAL SPECIES	8	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009 #7	ENSGT00940000155769 #9	ENSGT00640000091492.b #10	ENSGT01000000214440.B #11	ENSGT00530000063255.A #12	ENSGT00390000006634 #13	ENSGT01090000260114	ENSGT00940000156300.d #14	ENSGT00390000001799 #15	ENSGT00940000155569.a.a #16	ENSGT00940000159809 #17	ENSGT00390000015470 #18	ENSGT00950000182810.A.a.a #19	ENSGT00940000161664 #21	ENSGT00950000183053.C #22	ENSGT00940000157562 #23	ENSGT00530000063859.b #24	ENSGT00940000161921 #25	ENSGT00940000154543.a #26	ENSGT00390000018266.r	ENSGT00940000161589	ENSGT00940000158073 #29	ENSGT00390000011620.a.a.b #30	ENSGT00940000156010 #31	ENSGT00940000159695 #32	ENSGT00940000159853 #33	ENSGT00940000157379 #34	ENSGT00940000161502 #35	ENSGT00940000158762 #36	ENSGT00390000013839 #37
Horse	MODERN SPECIES	14	RAB22A (ENSECAG00000012914) #7	VAPB (ENSECAG00000013265) #9	APCDD1L (ENSECAG00000027891) #10	STX16 (ENSECAG00000018583) #11	NPEPL1 (ENSECAG00000022211) #12	ENSECAG00000004696 #13	ENSECAG00000053157 #14	ENSECAG00000040282	GNAS (ENSECAG00000024243) #14	NELFCD (ENSECAG00000016334) #15	CTSZ (ENSECAG00000024967) #16	TUBB1 (ENSECAG00000025099) #17	ENSECAG00000060119 #18	PRELID3B (ENSECAG00000000513) #19	ZNF831 (ENSECAG00000004219) #21	EDN3 (ENSECAG00000006225) #22	PHACTR3 (ENSECAG00000007706) #23	SYCP2 (ENSECAG00000016085) #24	FAM217B (ENSECAG00000004770) #26	PPP1R3D (ENSECAG00000004743) #25	ENSECAG00000036432	CDH26 (ENSECAG00000020738)	CDH4 (ENSECAG00000023333) #29	TAF4 (ENSECAG00000023048) #30	LSM14B (ENSECAG00000010659) #31	PSMA7 (ENSECAG00000014168) #32	SS18L1 (ENSECAG00000018310) #33	MTG2 (ENSECAG00000020567) #34	HRH3 (ENSECAG00000008149) #35	OSBPL2 (ENSECAG00000010200) #36	ADRM1 (ENSECAG00000052775) #37
Donkey	MODERN SPECIES	6	RAB22A (ENSEASG00005026275) #7	VAPB (ENSEASG00005023251) #9	APCDD1L (ENSEASG00005028820) #10	STX16 (ENSEASG00005023249) #11	NPEPL1 (ENSEASG00005023248) #12	ENSEASG00005032329	ENSEASG00005032603 #14	ENSEASG00005023240	ENSEASG00005035219 #14	NELFCD (ENSEASG00005023236) #15	CTSZ (ENSEASG00005023235) #16	TUBB1 (ENSEASG00005025539) #17	ENSEASG00005023231 #18	PRELID3B (ENSEASG00005023230) #19	ZNF831 (ENSEASG00005023229) #21	ENSEASG00005023228 #22	PHACTR3 (ENSEASG00005023227) #23	SYCP2 (ENSEASG00005023226) #24	PPP1R3D (ENSEASG00005034180) #25	FAM217B (ENSEASG00005029653) #26	ENSEASG00005038533	CDH26 (ENSEASG00005023223)	ENSEASG00005023220 #29	TAF4 (ENSEASG00005023219) #30	LSM14B (ENSEASG00005023218) #31	PSMA7 (ENSEASG00005023217) #32	SS18L1 (ENSEASG00005023216) #33	MTG2 (ENSEASG00005033789) #34	HRH3 (ENSEASG00005034836) #35	OSBPL2 (ENSEASG00005023211) #36	ADRM1 (ENSEASG00005023210) #37