Euteleostomi	ANCESTRAL SPECIES	50	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000165477	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.b.b.b ##33	ENSGT00620000087961.b ##33	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Sarcopterygii	ANCESTRAL SPECIES	69	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000165477	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36	ENSGT01030000234595.B.c.b #37
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000165477	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Amniota	ANCESTRAL SPECIES	5	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00620000087961.b ##33	ENSGT00940000158437 #34	ENSGT00940000158203 #35
Mammalia	ANCESTRAL SPECIES	20	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00620000087961.b ##33	ENSGT00940000158437 #34	ENSGT00940000158203 #35
Theria	ANCESTRAL SPECIES		ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.b ##33	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35
Eutheria	ANCESTRAL SPECIES	1	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.b ##33	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.b ##33	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.b ##33	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Glires	ANCESTRAL SPECIES	18	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Rodentia	ANCESTRAL SPECIES	12	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000160224 #17	ENSGT00940000156400 #16	ENSGT00390000016680 #18	ENSGT00940000157946 #19	ENSGT00940000165989	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000160224 #17	ENSGT00940000156400 #16	ENSGT00390000016680 #18	ENSGT00940000165989	ENSGT00940000157946 #19	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000160224 #17	ENSGT00940000156400 #16	ENSGT00390000016680 #18	ENSGT00940000165989	ENSGT00940000157946 #19	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Hystricomorpha_a	ANCESTRAL SPECIES	41	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000160224 #17	ENSGT00940000156400 #16	ENSGT00390000016680 #18	ENSGT00940000165989	ENSGT00940000157946 #19	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Hystricomorpha_b	ANCESTRAL SPECIES	39	ENSGT00580000081623 #9	ENSGT01070000253775.a.d.a.b.a #10	ENSGT01020000230346.B #11	ENSGT00940000155441 #12	ENSGT00940000175032	ENSGT00940000156608 #13	ENSGT00390000017990 #14	ENSGT00940000159546 #15	ENSGT00940000156400 #16	ENSGT00940000160224 #17	ENSGT00390000016680 #18	ENSGT00940000165989	ENSGT00940000157946 #19	ENSGT00530000063534.a #20	ENSGT00390000012875 #21	ENSGT00940000156909 #22	ENSGT00390000001969.b #23	ENSGT00390000007283 #24	ENSGT00390000011648.a #25	ENSGT00940000155057 #26	ENSGT00940000153567.b.a.b #27	ENSGT00940000161422 #28	ENSGT00940000153372.A.f #29	ENSGT00940000159379 #30	ENSGT00940000163878	ENSGT00940000156019 #31	ENSGT00940000155209 #32	ENSGT00620000087961.a.b.a.a.a.a #33	ENSGT00940000158437 #34	ENSGT00940000158203 #35	ENSGT00940000156681 #36
Long-tailed chinchilla	MODERN SPECIES	117	LHFPL3 (ENSCLAG00000007790) #7	ORC5 (ENSCLAG00000008027) #8	RELN (ENSCLAG00000007814) #9	SLC26A5 (ENSCLAG00000006369) #10	PSMC2 (ENSCLAG00000005494) #11	DNAJC2 (ENSCLAG00000008434) #12	PMPCB (ENSCLAG00000007214) #13	NAPEPLD (ENSCLAG00000006757) #14	ARMC10 (ENSCLAG00000006484) #15	LRRC17 (ENSCLAG00000009736) #16	FBXL13 (ENSCLAG00000006381) #17	ENSCLAG00000005813 #18	FGL2 (ENSCLAG00000004828) #19	CCDC146 (ENSCLAG00000007712) #20	ENSCLAG00000011224 #21	PTPN12 (ENSCLAG00000009559) #22	RSBN1L (ENSCLAG00000007980) #23	TMEM60 (ENSCLAG00000006206) #24	PHTF2 (ENSCLAG00000005414) #25	MAGI2 (ENSCLAG00000007220) #26	GNAI1 (ENSCLAG00000013140) #27	GNAT3 (ENSCLAG00000016271) #28	CD36 (ENSCLAG00000009968) #29	SEMA3C (ENSCLAG00000004911) #30	HGF (ENSCLAG00000004376) #31	CACNA2D1 (ENSCLAG00000006166) #32	PCLO (ENSCLAG00000004728) #33	SEMA3E (ENSCLAG00000006430) #34	SEMA3A (ENSCLAG00000005329) #35	SEMA3D (ENSCLAG00000012274) #36	GRM3 (ENSCLAG00000009192) #37