Murinae	ANCESTRAL SPECIES	1	ENSGT00940000153576.c.a	ENSGT00390000003068 #7	ENSGT00940000162276 #8	ENSGT00940000161981	ENSGT00940000159681 #10	ENSGT00860000136158 #11	ENSGT00940000161443 #12	ENSGT00940000153668.B #13	ENSGT00940000156001 #14	ENSGT00390000001774 #15	ENSGT00390000003751.a #16	ENSGT00940000163832 #17	ENSGT00560000078563 #18	ENSGT00940000156045 #19	ENSGT00940000160767 #21	ENSGT00940000159898 #22	ENSGT00390000006826 #23	ENSGT00950000183184.a.a #24	ENSGT00940000158361 #25	ENSGT00390000015818.f #26	ENSGT00680000100018.a.a.a #27	ENSGT00940000160909 #28	ENSGT00390000005923 #29	ENSGT00940000156472 #30	ENSGT00390000016619.a #31	ENSGT00940000160494 #32	ENSGT00940000155558 #33	ENSGT00940000157043 #35	ENSGT00940000160192 #36	ENSGT00940000158532 #37	ENSGT00940000160478
Mus	ANCESTRAL SPECIES	1	ENSGT00940000153576.c.a	ENSGT00390000003068 #7	ENSGT00940000162276 #8	ENSGT00940000161981	ENSGT00940000159681 #10	ENSGT00860000136158 #11	ENSGT00940000161443 #12	ENSGT00940000153668.B #13	ENSGT00940000156001 #14	ENSGT00390000001774 #15	ENSGT00390000003751.a #16	ENSGT00940000163832 #17	ENSGT00560000078563 #18	ENSGT00940000156045 #19	ENSGT00940000160767 #21	ENSGT00940000159898 #22	ENSGT00390000006826 #23	ENSGT00950000183184.a.a #24	ENSGT00940000158361 #25	ENSGT00390000015818.f #26	ENSGT00680000100018.a.a.a #27	ENSGT00940000160909 #28	ENSGT00390000005923 #29	ENSGT00940000156472 #30	ENSGT00390000016619.a #31	ENSGT00940000160494 #32	ENSGT00940000155558 #33	ENSGT00550000074794.eb #34	ENSGT00940000157043 #35	ENSGT00940000160192 #36	ENSGT00940000158532 #37
Mus_A	ANCESTRAL SPECIES		ENSGT00390000003068 #7	ENSGT00940000162276 #8	ENSGT00940000161981	ENSGT00940000159681 #10	ENSGT00860000136158 #11	ENSGT00940000161443 #12	ENSGT00940000153668.B #13	ENSGT00940000156001 #14	ENSGT00390000001774 #15	ENSGT00390000003751.a #16	ENSGT00940000163832 #17	ENSGT00940000163915	ENSGT00560000078563 #18	ENSGT00940000156045 #19	ENSGT00940000160767 #21	ENSGT00940000159898 #22	ENSGT00390000006826 #23	ENSGT00950000183184.a.a #24	ENSGT00940000158361 #25	ENSGT00390000015818.f #26	ENSGT00680000100018.a.a.a #27	ENSGT00940000160909 #28	ENSGT00390000005923 #29	ENSGT00940000156472 #30	ENSGT00390000016619.a #31	ENSGT00940000160494 #32	ENSGT00940000155558 #33	ENSGT00550000074794.eb #34	ENSGT00940000157043 #35	ENSGT00940000160192 #36	ENSGT00940000158532 #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000153576.c.a	ENSGT00390000003068 #7	ENSGT00940000162276 #8	ENSGT00940000161981	ENSGT00940000159681 #10	ENSGT00860000136158 #11	ENSGT00940000161443 #12	ENSGT00940000153668.B #13	ENSGT00940000156001 #14	ENSGT00390000001774 #15	ENSGT00390000003751.a #16	ENSGT00940000163915	ENSGT00560000078563 #18	ENSGT00940000156045 #19	ENSGT00940000160767 #21	ENSGT00940000159898 #22	ENSGT00390000006826 #23	ENSGT00950000183184.a.a #24	ENSGT00940000158361 #25	ENSGT00390000015818.f #26	ENSGT00680000100018.a.a.a #27	ENSGT00940000160909 #28	ENSGT00390000005923 #29	ENSGT00940000156472 #30	ENSGT00390000016619.a #31	ENSGT00940000160494 #32	ENSGT00940000155558 #33	ENSGT00550000074794.eb #34	ENSGT00940000157043 #35	ENSGT00940000160192 #36	ENSGT00940000158532 #37
Mus_C	ANCESTRAL SPECIES		ENSGT00940000153576.c.a	ENSGT00390000003068 #7	ENSGT00940000162276 #8	ENSGT00940000161981	ENSGT00940000159681 #10	ENSGT00860000136158 #11	ENSGT00940000161443 #12	ENSGT00940000153668.B #13	ENSGT00940000156001 #14	ENSGT00390000001774 #15	ENSGT00390000003751.a #16	ENSGT00940000163915	ENSGT00560000078563 #18	ENSGT00940000156045 #19	ENSGT00940000160767 #21	ENSGT00940000159898 #22	ENSGT00390000006826 #23	ENSGT00950000183184.a.a #24	ENSGT00940000158361 #25	ENSGT00390000015818.f #26	ENSGT00680000100018.a.a.a #27	ENSGT00940000160909 #28	ENSGT00390000005923 #29	ENSGT00940000156472 #30	ENSGT00390000016619.a #31	ENSGT00940000160494 #32	ENSGT00940000155558 #33	ENSGT00550000074794.eb #34	ENSGT00940000157043 #35	ENSGT00940000160192 #36	ENSGT00940000158532 #37
spretus	MODERN SPECIES	11	Timm10 (MGP_SPRETEiJ_G0024652) #7	Smtnl1 (MGP_SPRETEiJ_G0024651) #8	MGP_SPRETEiJ_G0024650 #9	Serping1 (MGP_SPRETEiJ_G0024649) #10	MGP_SPRETEiJ_G0024648 #11	Ypel4 (MGP_SPRETEiJ_G0024647) #12	Clp1 (MGP_SPRETEiJ_G0024646) #13	Zdhhc5 (MGP_SPRETEiJ_G0024645) #14	Med19 (MGP_SPRETEiJ_G0024644) #15	Tmx2 (MGP_SPRETEiJ_G0024643) #16	MGP_SPRETEiJ_G0024642 #17	MGP_SPRETEiJ_G0024641 #18	MGP_SPRETEiJ_G0024640 #19	MGP_SPRETEiJ_G0024639 #20	Tfpi (MGP_SPRETEiJ_G0024638) #21	Calcrl (MGP_SPRETEiJ_G0024637) #22	Zswim2 (MGP_SPRETEiJ_G0024636) #23	Fam171b (MGP_SPRETEiJ_G0024635) #24	Itgav (MGP_SPRETEiJ_G0024634) #25	Zc3h15 (MGP_SPRETEiJ_G0024633) #26	Fsip2 (MGP_SPRETEiJ_G0024632) #27	Zfp804a (MGP_SPRETEiJ_G0024631) #28	MGP_SPRETEiJ_G0024630 #29	Dusp19 (MGP_SPRETEiJ_G0024629) #30	Nckap1 (MGP_SPRETEiJ_G0024628) #31	Frzb (MGP_SPRETEiJ_G0024627) #32	Dnajc10 (MGP_SPRETEiJ_G0024626) #33	Prdx6b (MGP_SPRETEiJ_G0024625) #34	Pde1a (MGP_SPRETEiJ_G0024624) #35	Ppp1r1c (MGP_SPRETEiJ_G0024623) #36	Itprid2 (MGP_SPRETEiJ_G0024622) #37
Steppe mouse	MODERN SPECIES	2925	Slc43a1 (ENSMSIG00000002233)	Timm10 (ENSMSIG00000002453) #7	Smtnl1 (ENSMSIG00000002472) #8	Ube2l6 (ENSMSIG00000002535)	Serping1 (ENSMSIG00000002561) #10	ENSMSIG00000002632 #11	Ypel4 (ENSMSIG00000002663) #12	Clp1 (ENSMSIG00000002704) #13	Zdhhc5 (ENSMSIG00000002738) #14	Med19 (ENSMSIG00000002785) #15	Tmx2 (ENSMSIG00000002829) #16	Selenoh (ENSMSIG00000002964)	Btbd18 (ENSMSIG00000003069) #18	Ctnnd1 (ENSMSIG00000003105) #19	Tfpi (ENSMSIG00000003552) #21	Calcrl (ENSMSIG00000003856) #22	ENSMSIG00000003953
Mouse	MODERN SPECIES	11	Slc43a1 (ENSMUSG00000027075)	Timm10 (ENSMUSG00000027076) #7	Smtnl1 (ENSMUSG00000027077) #8	Ube2l6 (ENSMUSG00000027078)	Serping1 (ENSMUSG00000023224) #10	Ypel4 (ENSMUSG00000034059) #12	Clp1 (ENSMUSG00000027079) #13	Zdhhc5 (ENSMUSG00000034075) #14	Med19 (ENSMUSG00000027080) #15	Tmx2 (ENSMUSG00000050043) #16	Selenoh (ENSMUSG00000076437)	Btbd18 (ENSMUSG00000086598) #18	Gm28635 (ENSMUSG00000101645)	Ctnnd1 (ENSMUSG00000034101) #19	Tfpi (ENSMUSG00000027082) #21	Calcrl (ENSMUSG00000059588) #22	Gm13691 (ENSMUSG00000079247)	Gm13697 (ENSMUSG00000095824)	Gm13694 (ENSMUSG00000096337)	Gm13696 (ENSMUSG00000096484)	Gm13695 (ENSMUSG00000096729)	Gm13693 (ENSMUSG00000094336)	Gm13698 (ENSMUSG00000094125)	Zswim2 (ENSMUSG00000034552) #23	Fam171b (ENSMUSG00000048388) #24	Itgav (ENSMUSG00000027087) #25	Zc3h15 (ENSMUSG00000027091) #26	Fsip2 (ENSMUSG00000075249) #27	Zfp804a (ENSMUSG00000070866) #28	Nup35 (ENSMUSG00000026999) #29	Dusp19 (ENSMUSG00000027001) #30
Ryukyu mouse	MODERN SPECIES	11	Timm10 (MGP_CAROLIEiJ_G0023732) #7	Smtnl1 (MGP_CAROLIEiJ_G0023731) #8	MGP_CAROLIEiJ_G0023730 #9	Serping1 (MGP_CAROLIEiJ_G0023729) #10	MGP_CAROLIEiJ_G0023728 #11	Ypel4 (MGP_CAROLIEiJ_G0023727) #12	Clp1 (MGP_CAROLIEiJ_G0023726) #13	Zdhhc5 (MGP_CAROLIEiJ_G0023725) #14	Med19 (MGP_CAROLIEiJ_G0023724) #15	Tmx2 (MGP_CAROLIEiJ_G0023723) #16	MGP_CAROLIEiJ_G0023722 #17	Btbd18 (MGP_CAROLIEiJ_G0023721) #18	MGP_CAROLIEiJ_G0023720 #19	MGP_CAROLIEiJ_G0023719 #19	Tfpi (MGP_CAROLIEiJ_G0023718) #21	Calcrl (MGP_CAROLIEiJ_G0023717) #22	Zswim2 (MGP_CAROLIEiJ_G0023716) #23	Fam171b (MGP_CAROLIEiJ_G0023715) #24	Itgav (MGP_CAROLIEiJ_G0023714) #25	Zc3h15 (MGP_CAROLIEiJ_G0023713) #26	Fsip2 (MGP_CAROLIEiJ_G0023712) #27	Zfp804a (MGP_CAROLIEiJ_G0023711) #28	MGP_CAROLIEiJ_G0023710 #29	MGP_CAROLIEiJ_G0023709 #29	Dusp19 (MGP_CAROLIEiJ_G0023708) #30	Nckap1 (MGP_CAROLIEiJ_G0023707) #31	Frzb (MGP_CAROLIEiJ_G0023706) #32	Dnajc10 (MGP_CAROLIEiJ_G0023705) #33	Prdx6b (MGP_CAROLIEiJ_G0023704) #34	Pde1a (MGP_CAROLIEiJ_G0023703) #35	Ppp1r1c (MGP_CAROLIEiJ_G0023702) #36
Shrew mouse	MODERN SPECIES	16	Timm10 (MGP_PahariEiJ_G0025183) #7	Smtnl1 (MGP_PahariEiJ_G0025182) #8	MGP_PahariEiJ_G0025181 #9	Serping1 (MGP_PahariEiJ_G0025180) #10	MGP_PahariEiJ_G0025179 #11	Ypel4 (MGP_PahariEiJ_G0025178) #12	Clp1 (MGP_PahariEiJ_G0025177) #13	Zdhhc5 (MGP_PahariEiJ_G0025176) #14	Med19 (MGP_PahariEiJ_G0025175) #15	Tmx2 (MGP_PahariEiJ_G0025174) #16	MGP_PahariEiJ_G0025173 #17	Btbd18 (MGP_PahariEiJ_G0025172) #18	MGP_PahariEiJ_G0025171 #19	MGP_PahariEiJ_G0025170 #19	Tfpi (MGP_PahariEiJ_G0025169) #21	Calcrl (MGP_PahariEiJ_G0025168) #22	Zswim2 (MGP_PahariEiJ_G0025167) #23	Fam171b (MGP_PahariEiJ_G0025166) #24	Itgav (MGP_PahariEiJ_G0025165) #25	Fsip2 (MGP_PahariEiJ_G0025163) #27	Zfp804a (MGP_PahariEiJ_G0025162) #28	MGP_PahariEiJ_G0025161 #29	MGP_PahariEiJ_G0025160 #29	Dusp19 (MGP_PahariEiJ_G0025159) #30	Nckap1 (MGP_PahariEiJ_G0025158) #31	Frzb (MGP_PahariEiJ_G0025157) #32	Dnajc10 (MGP_PahariEiJ_G0025156) #33	Prdx6b (MGP_PahariEiJ_G0025155) #34	Pde1a (MGP_PahariEiJ_G0025154) #35	Ppp1r1c (MGP_PahariEiJ_G0025153) #36	Itprid2 (MGP_PahariEiJ_G0025152) #37
Rat	MODERN SPECIES	13	Slc43a1 (ENSRNOG00000008243)	Timm10 (ENSRNOG00000007883) #7	Smtnl1 (ENSRNOG00000007516) #8	Ube2l6 (ENSRNOG00000030467)	Serping1 (ENSRNOG00000007457) #10	Gm19426 (ENSRNOG00000070856) #11	Ypel4 (ENSRNOG00000069900) #12	Clp1 (ENSRNOG00000007416) #13	Zdhhc5 (ENSRNOG00000006832) #14	Med19 (ENSRNOG00000006050) #15	Tmx2 (ENSRNOG00000005308) #16	Selenoh (ENSRNOG00000054563)	Btbd18 (ENSRNOG00000043106) #18	Ctnnd1 (ENSRNOG00000030790) #19	Tfpi (ENSRNOG00000005039) #21	Calcrl (ENSRNOG00000054695) #22	Zswim2 (ENSRNOG00000032579) #23	Fam171b (ENSRNOG00000004783) #24	Itgav (ENSRNOG00000004912) #25	Zc3h15 (ENSRNOG00000005256) #26	LOC108350600 (ENSRNOG00000055484)	Fsip2 (ENSRNOG00000051199) #27	AABR07052692.1 (ENSRNOG00000047487)	Zfp804a (ENSRNOG00000038004) #28	LOC102547850 (ENSRNOG00000070077)	Nup35 (ENSRNOG00000009290) #29	Dusp19 (ENSRNOG00000008868) #30	Nckap1 (ENSRNOG00000007518) #31	Frzb (ENSRNOG00000007765) #32	Dnajc10 (ENSRNOG00000006803) #33	Pde1a (ENSRNOG00000054212) #35