Tetrapoda ANCESTRAL SPECIES 8 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 ENSGT00530000063790.a ENSGT00530000063632.A ENSGT00940000158851 ENSGT00940000156259.b ENSGT00940000155705.b ENSGT00390000002634.a #17 ENSGT00940000164108.a ENSGT00940000164623.C ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 Amniota ANCESTRAL SPECIES 31 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00950000182917.a.b.b ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000164108.a ENSGT00940000164623.C ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 Mammalia ANCESTRAL SPECIES 42 ENSGT00940000159327 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00390000016735 ENSGT00390000000053 Theria ANCESTRAL SPECIES 29 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00390000016735 ENSGT00390000000053 Eutheria ANCESTRAL SPECIES 27 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00390000016735 ENSGT00390000000053 ENSGT00940000159680 Boreoeutheria ANCESTRAL SPECIES 18 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 Euarchontoglires ANCESTRAL SPECIES 18 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 Primates ANCESTRAL SPECIES 18 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Haplorrhini ANCESTRAL SPECIES 14 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 13 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Platyrrhini ANCESTRAL SPECIES 16 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.l #33 ENSGT00390000002121.k ##33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 Cebidae ANCESTRAL SPECIES 20 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.k ##33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Cebidae_a ANCESTRAL SPECIES 9 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.l #33 ENSGT00390000002121.k ##33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 Capuchin MODERN SPECIES 234 LYL1 (ENSCCAG00000036697) #7 NFIX (ENSCCAG00000022096) #8 DAND5 (ENSCCAG00000018636) #9 GADD45GIP1 (ENSCCAG00000036734) #10 RAD23A (ENSCCAG00000030313) #11 CALR (ENSCCAG00000000456) #12 FARSA (ENSCCAG00000028176) #13 SYCE2 (ENSCCAG00000033990) #14 GCDH (ENSCCAG00000027806) #15 KLF1 (ENSCCAG00000022356) #16 ENSCCAG00000035903 #17 MAST1 (ENSCCAG00000036093) #18 RTBDN (ENSCCAG00000023878) #19 RNASEH2A (ENSCCAG00000030453) #20 THSD8 (ENSCCAG00000030346) #21 PRDX2 (ENSCCAG00000013200) #22 JUNB (ENSCCAG00000020250) #23 HOOK2 (ENSCCAG00000001971) #24 BEST2 (ENSCCAG00000028789) #25 ASNA1 (ENSCCAG00000036628) #26 TRIR (ENSCCAG00000034041) #27 TNPO2 (ENSCCAG00000024574) #28 FBXW9 (ENSCCAG00000027128) #29 ENSCCAG00000022190 #30 DHPS (ENSCCAG00000020342) #31 WDR83 (ENSCCAG00000034478) #32 WDR83OS (ENSCCAG00000027678) #33 MAN2B1 (ENSCCAG00000032165) #34 ZNF791 (ENSCCAG00000027336) #35 ZNF490 (ENSCCAG00000026766) #36 ZNF564 (ENSCCAG00000027400) #37 Bolivian squirrel monkey MODERN SPECIES 192 LYL1 (ENSSBOG00000035321) #7 NFIX (ENSSBOG00000036002) #8 DAND5 (ENSSBOG00000027807) #9 GADD45GIP1 (ENSSBOG00000022567) #10 RAD23A (ENSSBOG00000023231) #11 CALR (ENSSBOG00000019002) #12 FARSA (ENSSBOG00000031362) #13 SYCE2 (ENSSBOG00000022841) #14 GCDH (ENSSBOG00000021506) #15 KLF1 (ENSSBOG00000034347) #16 DNASE2 (ENSSBOG00000011199) #17 MAST1 (ENSSBOG00000020496) #18 RTBDN (ENSSBOG00000023703) #19 RNASEH2A (ENSSBOG00000033164) #20 THSD8 (ENSSBOG00000036213) #21 PRDX2 (ENSSBOG00000034677) #22 JUNB (ENSSBOG00000019470) #23 HOOK2 (ENSSBOG00000025848) #24 BEST2 (ENSSBOG00000025207) #25 GET3 (ENSSBOG00000034152) #26 TRIR (ENSSBOG00000032465) #27 TNPO2 (ENSSBOG00000019551) #28 FBXW9 (ENSSBOG00000029356) #29 ENSSBOG00000029032 DHPS (ENSSBOG00000033113) #31 WDR83 (ENSSBOG00000030461) #32 WDR83OS (ENSSBOG00000029116) ##33 MAN2B1 (ENSSBOG00000025631) #34 ZNF791 (ENSSBOG00000024486) #35 ZNF490 (ENSSBOG00000035661) #36 ZNF564 (ENSSBOG00000025431) #37 Marmoset MODERN SPECIES 14 TRMT1 (ENSCJAG00000004566) LYL1 (ENSCJAG00000004598) #7 NFIX (ENSCJAG00000004603) #8 DAND5 (ENSCJAG00000004639) #9 GADD45GIP1 (ENSCJAG00000004645) #10 ENSCJAG00000004494 #11 CALR (ENSCJAG00000004650) #12 FARSA (ENSCJAG00000004686) #13 SYCE2 (ENSCJAG00000004733) #14 GCDH (ENSCJAG00000004741) #15 KLF1 (ENSCJAG00000004762) #16 DNASE2 (ENSCJAG00000004764) #17 MAST1 (ENSCJAG00000004772) #18 RTBDN (ENSCJAG00000004863) #19 RNASEH2A (ENSCJAG00000004873) #20 PRDX2 (ENSCJAG00000004882) #22 JUNB (ENSCJAG00000078765) #23 HOOK2 (ENSCJAG00000004942) #24 ENSCJAG00000084405 TRIR (ENSCJAG00000005083) #27 TNPO2 (ENSCJAG00000005096) #28 FBXW9 (ENSCJAG00000005225) #29 ENSCJAG00000045360 #30 DHPS (ENSCJAG00000005244) #31 WDR83 (ENSCJAG00000005272) #32 ENSCJAG00000038528 ##33 MAN2B1 (ENSCJAG00000005297) #34 ZNF791 (ENSCJAG00000080833) #35 ZNF490 (ENSCJAG00000005408) #36 ZNF564 (ENSCJAG00000045776) #37 ZNF709 (ENSCJAG00000005418) ##35 Mas night monkey MODERN SPECIES 937 LYL1 (ENSANAG00000037857) #7 NFIX (ENSANAG00000009093) #8 DAND5 (ENSANAG00000022153) #9 GADD45GIP1 (ENSANAG00000021876) #10 RAD23A (ENSANAG00000037597) #11 CALR (ENSANAG00000021327) #12 FARSA (ENSANAG00000037420) #13 SYCE2 (ENSANAG00000036720) #14 KLF1 (ENSANAG00000036457) #16 GCDH (ENSANAG00000036490) #15 DNASE2 (ENSANAG00000021770) #17 MAST1 (ENSANAG00000020839) #18 RTBDN (ENSANAG00000037449) #19 RNASEH2A (ENSANAG00000037932) #20 THSD8 (ENSANAG00000035604) #21 PRDX2 (ENSANAG00000026462) #22 JUNB (ENSANAG00000018377) #23 HOOK2 (ENSANAG00000003110) #24 BEST2 (ENSANAG00000037461) #25 GET3 (ENSANAG00000037482) #26 TRIR (ENSANAG00000036223) #27 TNPO2 (ENSANAG00000036645) #28 FBXW9 (ENSANAG00000033814) #29 ENSANAG00000033935 DHPS (ENSANAG00000035528) #31 MAN2B1 (ENSANAG00000037791) #34 ZNF791 (ENSANAG00000035071) #35 ZNF490 (ENSANAG00000035599) #36 ZNF564 (ENSANAG00000036392) #37 ZNF709 (ENSANAG00000036940) ##35 ENSANAG00000033613 ##35 Catarrhini ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Hominoidea ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00390000008820.e.b.a.a.b Hominidae ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00390000008820.e.b.a.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00390000008820.e.b.a.a.b Homo/Pan group ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00390000008820.e.b.a.a.b Pan ANCESTRAL SPECIES 14 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00900000143204.b ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00390000008820.e.b.a.a.b ENSGT00940000164420 #37 Chimpanzee MODERN SPECIES 10 NFIX (ENSPTRG00000010555) #8 DAND5 (ENSPTRG00000010554) #9 GADD45GIP1 (ENSPTRG00000010553) #10 RAD23A (ENSPTRG00000010552) #11 CALR (ENSPTRG00000010551) #12 FARSA (ENSPTRG00000010550) #13 SYCE2 (ENSPTRG00000010549) #14 ENSPTRG00000050317 GCDH (ENSPTRG00000010548) #15 KLF1 (ENSPTRG00000010547) #16 DNASE2 (ENSPTRG00000010546) #17 MAST1 (ENSPTRG00000010545) #18 RTBDN (ENSPTRG00000010543) #19 RNASEH2A (ENSPTRG00000010542) #20 THSD8 (ENSPTRG00000049528) #21 PRDX2 (ENSPTRG00000010541) #22 JUNB (ENSPTRG00000029110) #23 HOOK2 (ENSPTRG00000010539) #24 BEST2 (ENSPTRG00000010538) #25 GET3 (ENSPTRG00000010537) #26 TRIR (ENSPTRG00000010536) #27 TNPO2 (ENSPTRG00000010535) #28 FBXW9 (ENSPTRG00000010534) #29 DHPS (ENSPTRG00000010533) #31 WDR83 (ENSPTRG00000010532) #32 WDR83OS (ENSPTRG00000010531) #33 MAN2B1 (ENSPTRG00000010530) #34 ZNF791 (ENSPTRG00000010521) #35 ZNF490 (ENSPTRG00000049030) #36 ENSPTRG00000051618 ZNF564 (ENSPTRG00000023641) #37 Bonobo MODERN SPECIES 10 LYL1 (ENSPPAG00000028076) #7 NFIX (ENSPPAG00000027719) #8 GADD45GIP1 (ENSPPAG00000039356) #10 RAD23A (ENSPPAG00000016916) #11 CALR (ENSPPAG00000006666) #12 FARSA (ENSPPAG00000034266) #13 SYCE2 (ENSPPAG00000028078) #14 ENSPPAG00000027273 GCDH (ENSPPAG00000026417) #15 KLF1 (ENSPPAG00000039322) #16 DNASE2 (ENSPPAG00000034169) #17 MAST1 (ENSPPAG00000035621) #18 RTBDN (ENSPPAG00000025282) #19 RNASEH2A (ENSPPAG00000028092) #20 THSD8 (ENSPPAG00000028013) #21 PRDX2 (ENSPPAG00000034246) #22 JUNB (ENSPPAG00000024799) #23 HOOK2 (ENSPPAG00000008477) #24 BEST2 (ENSPPAG00000036993) #25 GET3 (ENSPPAG00000042483) #26 TRIR (ENSPPAG00000023372) #27 ENSPPAG00000014576 TNPO2 (ENSPPAG00000019494) #28 FBXW9 (ENSPPAG00000028530) #29 DHPS (ENSPPAG00000022756) #31 WDR83 (ENSPPAG00000038802) #32 WDR83OS (ENSPPAG00000014278) #33 MAN2B1 (ENSPPAG00000031820) #34 ENSPPAG00000042840 ##35 ZNF490 (ENSPPAG00000030672) #36 ENSPPAG00000035947 Human MODERN SPECIES 10 LYL1 (ENSG00000104903) #7 NFIX (ENSG00000008441) #8 DAND5 (ENSG00000179284) #9 GADD45GIP1 (ENSG00000179271) #10 RAD23A (ENSG00000179262) #11 CALR (ENSG00000179218) #12 FARSA (ENSG00000179115) #13 SYCE2 (ENSG00000161860) #14 GCDH (ENSG00000105607) #15 KLF1 (ENSG00000105610) #16 DNASE2 (ENSG00000105612) #17 MAST1 (ENSG00000105613) #18 RTBDN (ENSG00000132026) #19 RNASEH2A (ENSG00000104889) #20 THSD8 (ENSG00000284491) #21 PRDX2 (ENSG00000167815) #22 JUNB (ENSG00000171223) #23 HOOK2 (ENSG00000095066) #24 BEST2 (ENSG00000039987) #25 GET3 (ENSG00000198356) #26 TRIR (ENSG00000123144) #27 TNPO2 (ENSG00000105576) #28 FBXW9 (ENSG00000132004) #29 GNG14 (ENSG00000283980) #30 DHPS (ENSG00000095059) #31 WDR83OS (ENSG00000105583) #33 WDR83 (ENSG00000123154) #32 ENSG00000269590 MAN2B1 (ENSG00000104774) #34 ZNF791 (ENSG00000173875) #35 ZNF490 (ENSG00000188033) #36 Gorilla MODERN SPECIES 10 LYL1 (ENSGGOG00000023512) #7 NFIX (ENSGGOG00000001831) #8 DAND5 (ENSGGOG00000009692) #9 GADD45GIP1 (ENSGGOG00000022807) #10 RAD23A (ENSGGOG00000023403) #11 CALR (ENSGGOG00000016129) #12 FARSA (ENSGGOG00000003418) #13 ENSGGOG00000003416 #14 GCDH (ENSGGOG00000003411) #15 KLF1 (ENSGGOG00000003408) #16 DNASE2 (ENSGGOG00000003402) #17 MAST1 (ENSGGOG00000003390) #18 RTBDN (ENSGGOG00000001903) #19 RNASEH2A (ENSGGOG00000005846) #20 THSD8 (ENSGGOG00000037364) #21 PRDX2 (ENSGGOG00000025089) #22 JUNB (ENSGGOG00000005566) #23 HOOK2 (ENSGGOG00000005558) #24 BEST2 (ENSGGOG00000005549) #25 ASNA1 (ENSGGOG00000005545) #26 TRIR (ENSGGOG00000005540) #27 ENSGGOG00000013442 #28 FBXW9 (ENSGGOG00000013425) #29 DHPS (ENSGGOG00000013390) #31 WDR83OS (ENSGGOG00000013381) #33 WDR83 (ENSGGOG00000013383) #32 MAN2B1 (ENSGGOG00000013365) #34 ENSGGOG00000043721 ZNF791 (ENSGGOG00000000606) #35 ZNF490 (ENSGGOG00000044086) #36 ENSGGOG00000039550 Orangutan MODERN SPECIES 10 TRMT1 (ENSPPYG00000009622) LYL1 (ENSPPYG00000009621) #7 ENSPPYG00000009620 #8 DAND5 (ENSPPYG00000009619) #9 GADD45GIP1 (ENSPPYG00000038376) #10 RAD23A (ENSPPYG00000009617) #11 CALR (ENSPPYG00000009616) #12 FARSA (ENSPPYG00000009615) #13 GCDH (ENSPPYG00000009613) #15 KLF1 (ENSPPYG00000009612) #16 DNASE2 (ENSPPYG00000009611) #17 MAST1 (ENSPPYG00000009610) #18 ENSPPYG00000009609 #19 RNASEH2A (ENSPPYG00000009608) #20 THSD8 (ENSPPYG00000035108) #21 PRDX2 (ENSPPYG00000009607) #22 JUNB (ENSPPYG00000034415) #23 HOOK2 (ENSPPYG00000009606) #24 BEST2 (ENSPPYG00000009605) #25 GET3 (ENSPPYG00000009604) #26 TRIR (ENSPPYG00000009603) #27 TNPO2 (ENSPPYG00000009602) #28 FBXW9 (ENSPPYG00000009601) #29 DHPS (ENSPPYG00000009600) #31 WDR83 (ENSPPYG00000009599) #32 WDR83OS (ENSPPYG00000009598) #33 MAN2B1 (ENSPPYG00000009597) #34 ZNF791 (ENSPPYG00000009596) #35 ZNF490 (ENSPPYG00000029467) #36 ENSPPYG00000041131 ZNF443 (ENSPPYG00000009595) ##35 Gibbon MODERN SPECIES NFIX (ENSNLEG00000012980) #8 DAND5 (ENSNLEG00000012978) #9 GADD45GIP1 (ENSNLEG00000012973) #10 RAD23A (ENSNLEG00000012969) #11 CALR (ENSNLEG00000012958) #12 ENSNLEG00000012957 FARSA (ENSNLEG00000012899) #13 ENSNLEG00000034095 #14 GCDH (ENSNLEG00000012871) #15 ENSNLEG00000029024 KLF1 (ENSNLEG00000012868) #16 DNASE2 (ENSNLEG00000012861) #17 MAST1 (ENSNLEG00000012834) #18 ENSNLEG00000012830 #19 RNASEH2A (ENSNLEG00000012806) #20 PRDX2 (ENSNLEG00000012800) #22 JUNB (ENSNLEG00000012796) #23 ENSNLEG00000012793 #24 TRIR (ENSNLEG00000033688) #27 TNPO2 (ENSNLEG00000012758) #28 FBXW9 (ENSNLEG00000012752) #29 DHPS (ENSNLEG00000012722) #31 WDR83 (ENSNLEG00000012710) #32 WDR83OS (ENSNLEG00000012705) #33 MAN2B1 (ENSNLEG00000012695) #34 ZNF791 (ENSNLEG00000012694) #35 ZNF490 (ENSNLEG00000012691) #36 ZNF564 (ENSNLEG00000012688) #37 ZNF709 (ENSNLEG00000036256) ##35 ZNF443 (ENSNLEG00000026561) ##35 ZNF799 (ENSNLEG00000034475) ##35 Cercopithecidae ANCESTRAL SPECIES 17 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Macaca ANCESTRAL SPECIES 21 ENSGT00530000063646.b.v.a ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Pig-tailed macaque MODERN SPECIES 76 TRMT1 (ENSMNEG00000037867) LYL1 (ENSMNEG00000013370) #7 NFIX (ENSMNEG00000032823) #8 DAND5 (ENSMNEG00000040891) #9 GADD45GIP1 (ENSMNEG00000033121) #10 RAD23A (ENSMNEG00000042153) #11 CALR (ENSMNEG00000034740) #12 FARSA (ENSMNEG00000043866) #13 SYCE2 (ENSMNEG00000032767) #14 GCDH (ENSMNEG00000035137) #15 KLF1 (ENSMNEG00000030783) #16 DNASE2 (ENSMNEG00000038975) #17 MAST1 (ENSMNEG00000038625) #18 RTBDN (ENSMNEG00000031687) #19 RNASEH2A (ENSMNEG00000033054) #20 PRDX2 (ENSMNEG00000042230) #22 JUNB (ENSMNEG00000006142) #23 HOOK2 (ENSMNEG00000006128) #24 BEST2 (ENSMNEG00000043730) #25 GET3 (ENSMNEG00000028577) #26 TRIR (ENSMNEG00000007751) #27 TNPO2 (ENSMNEG00000041024) #28 FBXW9 (ENSMNEG00000039654) #29 ENSMNEG00000042372 DHPS (ENSMNEG00000044271) #31 WDR83 (ENSMNEG00000045547) #32 WDR83OS (ENSMNEG00000045544) #33 MAN2B1 (ENSMNEG00000045549) #34 ZNF791 (ENSMNEG00000045545) #35 ZNF490 (ENSMNEG00000045546) #36 ZNF564 (ENSMNEG00000045548) #37 Macaca_a DUPLICATION Macaca_a ANCESTRAL SPECIES ENSGT00940000155828.o.b.a #22 Crab-eating macaque MODERN SPECIES 10 ENSMFAG00000047628 TRMT1 (ENSMFAG00000033143) LYL1 (ENSMFAG00000032986) #7 NFIX (ENSMFAG00000038849) #8 DAND5 (ENSMFAG00000033697) #9 GADD45GIP1 (ENSMFAG00000048260) #10 RAD23A (ENSMFAG00000003404) #11 CALR (ENSMFAG00000040740) #12 FARSA (ENSMFAG00000030595) #13 GCDH (ENSMFAG00000003761) #15 KLF1 (ENSMFAG00000044883) #16 DNASE2 (ENSMFAG00000003665) #17 MAST1 (ENSMFAG00000041128) #18 RTBDN (ENSMFAG00000038313) #19 RNASEH2A (ENSMFAG00000002011) #20 ENSMFAG00000031614 #22 ENSMFAG00000052456 #23 MAN2B1 (ENSMFAG00000042986) #34 ZNF791 (ENSMFAG00000036181) #35 ENSMFAG00000049717 ZNF490 (ENSMFAG00000031592) #36 ENSMFAG00000061912 ZNF799 (ENSMFAG00000020521) ##35 ENSMFAG00000034105 ##35 ENSMFAG00000001303 ZNF44 (ENSMFAG00000043810) ##35 ENSMFAG00000064789 ##35 ENSMFAG00000032338 ENSMFAG00000063908 ##35 ZNF136 (ENSMFAG00000042768) ENSMFAG00000061729 Macaca_a DUPLICATION Macaca_a ANCESTRAL SPECIES ENSGT00940000155828.o.b.b.a #22 Rhesus MODERN SPECIES 328 USP9Y (ENSMMUG00000045991) DDX3Y (ENSMMUG00000043966) UTY (ENSMMUG00000038182) ENSMMUG00000055280 ENSMMUG00000042225 ENSMMUG00000042267 ENSMMUG00000061325 NLGN4Y (ENSMMUG00000040210) CYorf15A (ENSMMUG00000049104) KDM5D (ENSMMUG00000045017) ENSMMUG00000057579 EIF1AY (ENSMMUG00000043715) ENSMMUG00000059478 RPS4Y2 (ENSMMUG00000038824) ENSMMUG00000039261 ENSMMUG00000061536 #22 ENSMMUG00000056138 XKR3 (ENSMMUG00000039089) ENSMMUG00000049379 ENSMMUG00000064248 ENSMMUG00000042062 CDY (ENSMMUG00000054832) ENSMMUG00000050111 ENSMMUG00000041692 ENSMMUG00000041274 ENSMMUG00000038984 ENSMMUG00000049217 ENSMMUG00000057875 ENSMMUG00000045289 Crab-eating macaque MODERN SPECIES 174 UTY (ENSMFAG00000063023) ENSMFAG00000063890 ENSMFAG00000053995 ENSMFAG00000049348 ENSMFAG00000051040 ENSMFAG00000047494 ENSMFAG00000061191 ENSMFAG00000050377 ENSMFAG00000052978 NLGN4Y (ENSMFAG00000038021) ENSMFAG00000056241 ENSMFAG00000055347 KDM5D (ENSMFAG00000063076) EIF1AY (ENSMFAG00000052371) RPS4Y2 (ENSMFAG00000048442) ENSMFAG00000051695 #22 ENSMFAG00000049576 ENSMFAG00000065658 XKR3 (ENSMFAG00000048309) ENSMFAG00000052765 ENSMFAG00000065739 ENSMFAG00000048008 ENSMFAG00000059356 ENSMFAG00000056918 ENSMFAG00000048100 ENSMFAG00000054020 ENSMFAG00000054407 ENSMFAG00000057622 ENSMFAG00000059046 ENSMFAG00000062404 ENSMFAG00000055594 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000159327 ENSGT00530000063646.b.v.a ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.o.b.b.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.b.a.a ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00940000164096 Rhesus MODERN SPECIES 10 NACC1 (ENSMMUG00000017971) TRMT1 (ENSMMUG00000001167) LYL1 (ENSMMUG00000001166) #7 NFIX (ENSMMUG00000019292) #8 DAND5 (ENSMMUG00000063314) #9 GADD45GIP1 (ENSMMUG00000042251) #10 RAD23A (ENSMMUG00000004393) #11 CALR (ENSMMUG00000004392) #12 FARSA (ENSMMUG00000004390) #13 GCDH (ENSMMUG00000007043) #15 KLF1 (ENSMMUG00000011230) #16 DNASE2 (ENSMMUG00000028866) #17 MAST1 (ENSMMUG00000008740) #18 RTBDN (ENSMMUG00000007322) #19 RNASEH2A (ENSMMUG00000045010) #20 PRDX2 (ENSMMUG00000005689) #22 JUNB (ENSMMUG00000005688) #23 HOOK2 (ENSMMUG00000005686) #24 BEST2 (ENSMMUG00000063236) #25 GET3 (ENSMMUG00000006275) #26 TRIR (ENSMMUG00000006274) #27 TNPO2 (ENSMMUG00000005684) #28 FBXW9 (ENSMMUG00000016870) #29 DHPS (ENSMMUG00000016869) #31 WDR83 (ENSMMUG00000016868) #32 WDR83OS (ENSMMUG00000016863) #34 ZNF791 (ENSMMUG00000016862) #35 ZNF490 (ENSMMUG00000016860) #36 ENSMMUG00000058614 ENSMMUG00000054313 ZNF709 (ENSMMUG00000005236) ##35 Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Olive baboon MODERN SPECIES 12 TRMT1 (ENSPANG00000009247) LYL1 (ENSPANG00000014670) #7 NFIX (ENSPANG00000018992) #8 GADD45GIP1 (ENSPANG00000009045) #10 RAD23A (ENSPANG00000014671) #11 CALR (ENSPANG00000005597) #12 FARSA (ENSPANG00000010978) #13 SYCE2 (ENSPANG00000001632) #14 GCDH (ENSPANG00000007728) #15 KLF1 (ENSPANG00000033071) #16 DNASE2 (ENSPANG00000049574) #17 MAST1 (ENSPANG00000015630) #18 RTBDN (ENSPANG00000015629) #19 RNASEH2A (ENSPANG00000034495) #20 THSD8 (ENSPANG00000032212) #21 PRDX2 (ENSPANG00000010732) #22 JUNB (ENSPANG00000018727) #23 HOOK2 (ENSPANG00000014672) #24 BEST2 (ENSPANG00000022682) #25 GET3 (ENSPANG00000017713) #26 TRIR (ENSPANG00000004448) #27 TNPO2 (ENSPANG00000016857) #28 FBXW9 (ENSPANG00000050930) #29 DHPS (ENSPANG00000011701) #31 WDR83 (ENSPANG00000010733) #32 WDR83OS (ENSPANG00000038509) #33 MAN2B1 (ENSPANG00000017977) #34 ZNF791 (ENSPANG00000005118) #35 ZNF490 (ENSPANG00000002672) #36 ZNF709 (ENSPANG00000034349) ##35 ENSPANG00000042135 Cercopithecinae_d ANCESTRAL SPECIES 8 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Drill MODERN SPECIES 1150 NFIX (ENSMLEG00000009460) #8 DAND5 (ENSMLEG00000039027) #9 GADD45GIP1 (ENSMLEG00000026252) #10 RAD23A (ENSMLEG00000025874) #11 CALR (ENSMLEG00000043015) #12 FARSA (ENSMLEG00000029157) #13 SYCE2 (ENSMLEG00000040081) #14 GCDH (ENSMLEG00000034975) #15 ENSMLEG00000022275 KLF1 (ENSMLEG00000029486) #16 DNASE2 (ENSMLEG00000042329) #17 ENSMLEG00000014873 #18 RTBDN (ENSMLEG00000029058) #19 RNASEH2A (ENSMLEG00000043654) #20 THSD8 (ENSMLEG00000031315) #21 PRDX2 (ENSMLEG00000007227) #22 JUNB (ENSMLEG00000002218) #23 HOOK2 (ENSMLEG00000042169) #24 BEST2 (ENSMLEG00000036400) #25 GET3 (ENSMLEG00000042440) #26 TNPO2 (ENSMLEG00000018391) #28 FBXW9 (ENSMLEG00000036977) #29 ENSMLEG00000028807 DHPS (ENSMLEG00000039380) #31 WDR83 (ENSMLEG00000006025) #32 WDR83OS (ENSMLEG00000030207) #33 MAN2B1 (ENSMLEG00000033102) #34 ZNF791 (ENSMLEG00000034449) #35 Sooty mangabey MODERN SPECIES 347 TRMT1 (ENSCATG00000039850) LYL1 (ENSCATG00000044487) #7 NFIX (ENSCATG00000043066) #8 DAND5 (ENSCATG00000043902) #9 GADD45GIP1 (ENSCATG00000030476) #10 RAD23A (ENSCATG00000004423) #11 CALR (ENSCATG00000033446) #12 ENSCATG00000024201 #13 SYCE2 (ENSCATG00000041610) #14 GCDH (ENSCATG00000027594) #15 KLF1 (ENSCATG00000043665) #16 DNASE2 (ENSCATG00000039766) #17 MAST1 (ENSCATG00000034930) #18 RTBDN (ENSCATG00000043279) #19 RNASEH2A (ENSCATG00000029609) #20 PRDX2 (ENSCATG00000030663) #22 JUNB (ENSCATG00000021976) #23 HOOK2 (ENSCATG00000035441) #24 BEST2 (ENSCATG00000018527) #25 GET3 (ENSCATG00000010766) #26 TRIR (ENSCATG00000041032) #27 TNPO2 (ENSCATG00000042599) #28 FBXW9 (ENSCATG00000036324) #29 ENSCATG00000036205 ENSCATG00000037007 #31 WDR83 (ENSCATG00000035388) #32 WDR83OS (ENSCATG00000036611) #33 MAN2B1 (ENSCATG00000042104) #34 ZNF791 (ENSCATG00000041735) #35 ZNF490 (ENSCATG00000029197) #36 ENSCATG00000020970 Vervet Monkey MODERN SPECIES 25 TRMT1 (ENSCSAG00000006500) LYL1 (ENSCSAG00000006504) #7 NFIX (ENSCSAG00000006510) #8 DAND5 (ENSCSAG00000006514) #9 GADD45GIP1 (ENSCSAG00000006518) #10 RAD23A (ENSCSAG00000006523) #11 CALR (ENSCSAG00000006527) #12 FARSA (ENSCSAG00000006530) #13 SYCE2 (ENSCSAG00000006533) #14 GCDH (ENSCSAG00000006539) #15 KLF1 (ENSCSAG00000006545) #16 DNASE2 (ENSCSAG00000006550) #17 MAST1 (ENSCSAG00000006558) #18 RTBDN (ENSCSAG00000006564) #19 RNASEH2A (ENSCSAG00000006567) #20 PRDX2 (ENSCSAG00000006571) #22 JUNB (ENSCSAG00000018838) #23 HOOK2 (ENSCSAG00000006578) #24 BEST2 (ENSCSAG00000006582) #25 GET3 (ENSCSAG00000006585) #26 TRIR (ENSCSAG00000006588) #27 TNPO2 (ENSCSAG00000006597) #28 FBXW9 (ENSCSAG00000006605) #29 DHPS (ENSCSAG00000006608) #31 WDR83 (ENSCSAG00000006611) #32 WDR83OS (ENSCSAG00000006616) #33 MAN2B1 (ENSCSAG00000006628) #34 ZNF791 (ENSCSAG00000006632) #35 ZNF490 (ENSCSAG00000006639) #36 ENSCSAG00000006650 ZNF564 (ENSCSAG00000006658) #37 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Golden snub-nosed monkey MODERN SPECIES 975 LYL1 (ENSRROG00000030934) #7 NFIX (ENSRROG00000033828) #8 DAND5 (ENSRROG00000032903) #9 GADD45GIP1 (ENSRROG00000032590) #10 RAD23A (ENSRROG00000040220) #11 CALR (ENSRROG00000044583) #12 FARSA (ENSRROG00000040046) #13 SYCE2 (ENSRROG00000032909) #14 GCDH (ENSRROG00000044762) #15 KLF1 (ENSRROG00000041432) #16 DNASE2 (ENSRROG00000029927) #17 MAST1 (ENSRROG00000042288) #18 RTBDN (ENSRROG00000035994) #19 RNASEH2A (ENSRROG00000043799) #20 THSD8 (ENSRROG00000036021) #21 PRDX2 (ENSRROG00000035034) #22 JUNB (ENSRROG00000025586) #23 HOOK2 (ENSRROG00000026930) #24 BEST2 (ENSRROG00000036441) #25 GET3 (ENSRROG00000034020) #26 TRIR (ENSRROG00000042115) #27 TNPO2 (ENSRROG00000040402) #28 FBXW9 (ENSRROG00000041458) #29 ENSRROG00000041417 DHPS (ENSRROG00000040289) #31 WDR83 (ENSRROG00000017599) #32 WDR83OS (ENSRROG00000035299) #33 MAN2B1 (ENSRROG00000039902) #34 ZNF791 (ENSRROG00000031644) #35 ZNF490 (ENSRROG00000039939) #36 ZNF564 (ENSRROG00000026298) #37 Black snub-nosed monkey MODERN SPECIES 911 UBXN4 (ENSRBIG00000004771) R3HDM1 (ENSRBIG00000033317) ENSRBIG00000028792 ZRANB3 (ENSRBIG00000039852) RAB3GAP1 (ENSRBIG00000043681) MAP3K19 (ENSRBIG00000035927) CCNT2 (ENSRBIG00000033581) ACMSD (ENSRBIG00000032023) TMEM163 (ENSRBIG00000040158) ENSRBIG00000015170 ENSRBIG00000041688 MGAT5 (ENSRBIG00000044917) ENSRBIG00000040148 RNASEH2A (ENSRBIG00000023554) #20 THSD8 (ENSRBIG00000000299) #21 PRDX2 (ENSRBIG00000040222) #22 HOOK2 (ENSRBIG00000036323) #24 BEST2 (ENSRBIG00000038659) #25 GET3 (ENSRBIG00000028609) #26 TRIR (ENSRBIG00000031142) #27 TNPO2 (ENSRBIG00000036652) #28 FBXW9 (ENSRBIG00000037412) #29 ENSRBIG00000040808 DHPS (ENSRBIG00000031601) #31 WDR83 (ENSRBIG00000027958) #32 WDR83OS (ENSRBIG00000027854) #33 MAN2B1 (ENSRBIG00000037745) #34 ZNF791 (ENSRBIG00000000657) #35 ZNF490 (ENSRBIG00000026285) #36 ZNF564 (ENSRBIG00000031165) #37 ZNF44 (ENSRBIG00000029636) ##35 Simiiformes ANCESTRAL SPECIES 5 ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i ENSGT00390000018829.z Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000154552.b.e.b ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b.a ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i ENSGT00390000018829.z Cebidae ANCESTRAL SPECIES 5 ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b.a ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i ENSGT00390000018829.y.a.a ENSGT00390000009366.d Cebidae_a ANCESTRAL SPECIES 59 ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000155377 Capuchin DUPLICATION Capuchin MODERN SPECIES 564 ENSCCAG00000004912 MCHR2 (ENSCCAG00000029134) ENSCCAG00000027923 ##22 SIM1 (ENSCCAG00000011453) ENSCCAG00000027452 ENSCCAG00000024701 ASCC3 (ENSCCAG00000024230) Capuchin MODERN SPECIES 167 TEX51 (ENSCCAG00000028046) GYPC (ENSCCAG00000037164) CNTNAP5 (ENSCCAG00000029015) ENSCCAG00000022004 ENSCCAG00000029671 ##22 ENSCCAG00000022252 TSN (ENSCCAG00000026371) ENSCCAG00000026664 ENSCCAG00000029703 ENSCCAG00000032055 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 265 CCDC170 (ENSANAG00000034546) ESR1 (ENSANAG00000033920) ENSANAG00000032083 SYNE1 (ENSANAG00000028713) MYCT1 (ENSANAG00000028766) VIP (ENSANAG00000033466) ENSANAG00000026755 FBXO5 (ENSANAG00000000307) MTRF1L (ENSANAG00000007078) RGS17 (ENSANAG00000020543) OPRM1 (ENSANAG00000036165) IPCEF1 (ENSANAG00000025255) CNKSR3 (ENSANAG00000026546) ENSANAG00000029661 SCAF8 (ENSANAG00000036184) ENSANAG00000014514 ##22 TIAM2 (ENSANAG00000025426) TFB1M (ENSANAG00000021469) CLDN20 (ENSANAG00000016075) NOX3 (ENSANAG00000002866) ARID1B (ENSANAG00000031205) TMEM242 (ENSANAG00000021582) ENSANAG00000022533 ENSANAG00000034108 ENSANAG00000020054 ZDHHC14 (ENSANAG00000034945) SNX9 (ENSANAG00000023218) SYNJ2 (ENSANAG00000026575) SERAC1 (ENSANAG00000032062) GTF2H5 (ENSANAG00000029980) ENSANAG00000033750 Mas night monkey MODERN SPECIES 478 ENSANAG00000032603 ##22 SIM1 (ENSANAG00000028397) ENSANAG00000036846 ASCC3 (ENSANAG00000021476) GRIK2 (ENSANAG00000000802) ENSANAG00000019962 HACE1 (ENSANAG00000037835) ENSANAG00000036677 BVES (ENSANAG00000015115) POPDC3 (ENSANAG00000026735) ENSANAG00000015673 ENSANAG00000024327 PRDM1 (ENSANAG00000030675) ATG5 (ENSANAG00000022796) ENSANAG00000027713 CRYBG1 (ENSANAG00000023839) Catarrhini ANCESTRAL SPECIES 5 ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i Hominoidea ANCESTRAL SPECIES 21 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00910000147093 ENSGT00940000153889.e.b.a.d.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 ENSGT00940000161564 ENSGT00940000161440 Hominidae ANCESTRAL SPECIES 23 ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00950000183120.e.b.a.a.b.b.b.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 ENSGT00940000161564 ENSGT00940000161440 Homo/Pan/Gorilla group ANCESTRAL SPECIES 23 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.h.b ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 Homo/Pan group ANCESTRAL SPECIES 22 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 Pan ANCESTRAL SPECIES 22 ENSGT00940000160575 ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00930000151026.f ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 Chimpanzee MODERN SPECIES 4 FLT3 (ENSPTRG00000005740) ENSPTRG00000046829 PAN3 (ENSPTRG00000005742) FLT1 (ENSPTRG00000005743) ENSPTRG00000045890 ENSPTRG00000046663 POMP (ENSPTRG00000005745) SLC46A3 (ENSPTRG00000005746) ENSPTRG00000045489 MTUS2 (ENSPTRG00000005747) ENSPTRG00000046056 SLC7A1 (ENSPTRG00000005750) ENSPTRG00000049804 UBL3 (ENSPTRG00000005751) KATNAL1 (ENSPTRG00000005753) ENSPTRG00000044243 ##22 UBE2L5 (ENSPTRG00000050842) ENSPTRG00000048008 USPL1 (ENSPTRG00000005756) ALOX5AP (ENSPTRG00000005757) MEDAG (ENSPTRG00000005758) TEX26 (ENSPTRG00000005759) HSPH1 (ENSPTRG00000005760) B3GLCT (ENSPTRG00000005761) RXFP2 (ENSPTRG00000005762) FRY (ENSPTRG00000005764) ENSPTRG00000045380 ZAR1L (ENSPTRG00000046741) BRCA2 (ENSPTRG00000005766) N4BP2L1 (ENSPTRG00000045602) ENSPTRG00000048653 Bonobo MODERN SPECIES 4 CDX2 (ENSPPAG00000032963) FLT3 (ENSPPAG00000015701) PAN3 (ENSPPAG00000027826) ENSPPAG00000030264 ENSPPAG00000033250 ENSPPAG00000027416 POMP (ENSPPAG00000036286) SLC46A3 (ENSPPAG00000035795) ENSPPAG00000027903 MTUS2 (ENSPPAG00000032687) ENSPPAG00000034238 SLC7A1 (ENSPPAG00000037016) ENSPPAG00000015303 UBL3 (ENSPPAG00000027496) KATNAL1 (ENSPPAG00000033530) ENSPPAG00000037440 ##22 UBE2L5 (ENSPPAG00000032233) ENSPPAG00000030148 USPL1 (ENSPPAG00000032740) ENSPPAG00000033826 MEDAG (ENSPPAG00000035081) TEX26 (ENSPPAG00000008979) HSPH1 (ENSPPAG00000012606) B3GLCT (ENSPPAG00000029099) RXFP2 (ENSPPAG00000031019) FRY (ENSPPAG00000039014) ENSPPAG00000029942 ZAR1L (ENSPPAG00000036799) BRCA2 (ENSPPAG00000002166) N4BP2L1 (ENSPPAG00000040605) ENSPPAG00000021320 Gorilla MODERN SPECIES 4 POLR1D (ENSGGOG00000004235) GSX1 (ENSGGOG00000005011) PDX1 (ENSGGOG00000002569) CDX2 (ENSGGOG00000005487) URAD (ENSGGOG00000005489) FLT3 (ENSGGOG00000000882) PAN3 (ENSGGOG00000016079) FLT1 (ENSGGOG00000008750) ENSGGOG00000036812 ENSGGOG00000036780 POMP (ENSGGOG00000015316) SLC46A3 (ENSGGOG00000014254) ENSGGOG00000042729 UBL3 (ENSGGOG00000023146) KATNAL1 (ENSGGOG00000026875) ENSGGOG00000024714 ##22 UBE2L5 (ENSGGOG00000006857) HMGB1 (ENSGGOG00000026764) USPL1 (ENSGGOG00000004673) ENSGGOG00000013859 MEDAG (ENSGGOG00000009867) TEX26 (ENSGGOG00000016812) HSPH1 (ENSGGOG00000015313) B3GLCT (ENSGGOG00000002840) RXFP2 (ENSGGOG00000002645) ENSGGOG00000023700 FRY (ENSGGOG00000007253) ZAR1L (ENSGGOG00000015803) BRCA2 (ENSGGOG00000015808) N4BP2L1 (ENSGGOG00000015849) ENSGGOG00000025412 Orangutan MODERN SPECIES 4 CDX2 (ENSPPYG00000005242) URAD (ENSPPYG00000005243) FLT3 (ENSPPYG00000005244) ENSPPYG00000040072 PAN3 (ENSPPYG00000005245) FLT1 (ENSPPYG00000005246) ENSPPYG00000034417 ENSPPYG00000038952 POMP (ENSPPYG00000005247) SLC46A3 (ENSPPYG00000005248) MTUS2 (ENSPPYG00000005249) SLC7A1 (ENSPPYG00000005250) ENSPPYG00000034870 UBL3 (ENSPPYG00000037129) KATNAL1 (ENSPPYG00000005253) ENSPPYG00000031030 ##22 UBE2L5 (ENSPPYG00000005254) ENSPPYG00000030447 USPL1 (ENSPPYG00000005543) ENSPPYG00000005255 MEDAG (ENSPPYG00000005256) TEX26 (ENSPPYG00000005257) HSPH1 (ENSPPYG00000005258) B3GLCT (ENSPPYG00000005259) RXFP2 (ENSPPYG00000005260) FRY (ENSPPYG00000005262) ENSPPYG00000041535 ZAR1L (ENSPPYG00000005263) BRCA2 (ENSPPYG00000005264) N4BP2L1 (ENSPPYG00000038196) ENSPPYG00000005266 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 ENSGT00880000138028.b.b Cercopithecinae ANCESTRAL SPECIES 20 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00910000147887 ENSGT00940000158713 ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000155828.o.a ##22 ENSGT00940000156630 ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Cercopithecinae_a ANCESTRAL SPECIES 19 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00910000147887 ENSGT00940000158713 ENSGT00910000146937 ENSGT00910000147093 ENSGT00940000153783.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000155828.o.a ##22 ENSGT00940000156630 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462.e ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Macaca ANCESTRAL SPECIES 19 ENSGT00940000162542 ENSGT00940000161261 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000158713 ENSGT00910000147093 ENSGT00940000153783.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00950000183120.e.b.a.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 Pig-tailed macaque MODERN SPECIES 125 UBL3 (ENSMNEG00000044962) KATNAL1 (ENSMNEG00000036195) ENSMNEG00000039963 ##22 HMGB1 (ENSMNEG00000028891) USPL1 (ENSMNEG00000034203) ALOX5AP (ENSMNEG00000043933) MEDAG (ENSMNEG00000033678) TEX26 (ENSMNEG00000027388) HSPH1 (ENSMNEG00000032386) B3GLCT (ENSMNEG00000035100) RXFP2 (ENSMNEG00000032879) FRY (ENSMNEG00000030299) ENSMNEG00000033135 ZAR1L (ENSMNEG00000029527) BRCA2 (ENSMNEG00000036002) N4BP2L1 (ENSMNEG00000039181) ENSMNEG00000035638 PDS5B (ENSMNEG00000043516) Macaca_a ANCESTRAL SPECIES 19 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000158713 ENSGT00910000147093 ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a ##22 ENSGT00950000183120.e.b.a.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Crab-eating macaque MODERN SPECIES 8 PDX1 (ENSMFAG00000063371) CDX2 (ENSMFAG00000051158) URAD (ENSMFAG00000043442) FLT3 (ENSMFAG00000044854) ENSMFAG00000052223 ENSMFAG00000063510 PAN3 (ENSMFAG00000025538) FLT1 (ENSMFAG00000035718) ENSMFAG00000039222 POMP (ENSMFAG00000025369) SLC46A3 (ENSMFAG00000030072) MTUS2 (ENSMFAG00000032200) SLC7A1 (ENSMFAG00000043457) UBL3 (ENSMFAG00000044955) KATNAL1 (ENSMFAG00000053013) ENSMFAG00000053527 ##22 UBE2L5 (ENSMFAG00000045697) ENSMFAG00000030905 USPL1 (ENSMFAG00000032370) ALOX5AP (ENSMFAG00000032586) MEDAG (ENSMFAG00000035649) TEX26 (ENSMFAG00000035671) HSPH1 (ENSMFAG00000018638) B3GLCT (ENSMFAG00000041822) RXFP2 (ENSMFAG00000003580) FRY (ENSMFAG00000040039) ZAR1L (ENSMFAG00000061082) BRCA2 (ENSMFAG00000041961) ENSMFAG00000002717 ENSMFAG00000061510 N4BP2L2 (ENSMFAG00000007968) Cercopithecinae_b ANCESTRAL SPECIES 28 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00910000147887 ENSGT00940000158713 ENSGT00910000146937 ENSGT00910000147093 ENSGT00940000153783.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000155828.o.a ##22 ENSGT00940000156630 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462.e ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Cercopithecinae_d ANCESTRAL SPECIES 54 ENSGT00390000004952.b ENSGT00940000155828.o.a ##22 ENSGT00940000156630 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462.e ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Drill MODERN SPECIES 1547 KATNAL1 (ENSMLEG00000037336) ENSMLEG00000033851 ##22 UBE2L5 (ENSMLEG00000007318) ENSMLEG00000037253 USPL1 (ENSMLEG00000027348) ALOX5AP (ENSMLEG00000031542) MEDAG (ENSMLEG00000028781) TEX26 (ENSMLEG00000030665) HSPH1 (ENSMLEG00000030837) B3GLCT (ENSMLEG00000033315) Sooty mangabey MODERN SPECIES 125 UBL3 (ENSCATG00000040986) ENSCATG00000037373 ##22 KATNAL1 (ENSCATG00000036007) UBE2L5 (ENSCATG00000018077) HMGB1 (ENSCATG00000017216) ENSCATG00000037887 USPL1 (ENSCATG00000034087) ALOX5AP (ENSCATG00000030048) MEDAG (ENSCATG00000028177) TEX26 (ENSCATG00000021596) HSPH1 (ENSCATG00000045191) B3GLCT (ENSCATG00000039061) RXFP2 (ENSCATG00000045277) FRY (ENSCATG00000033487) ZAR1L (ENSCATG00000038889) BRCA2 (ENSCATG00000031672) N4BP2L1 (ENSCATG00000036810) Olive baboon MODERN SPECIES 792 ENSPANG00000010271 ENSPANG00000048506 EFHC2 (ENSPANG00000011868) ENSPANG00000035225 NDP (ENSPANG00000040730) MAOA (ENSPANG00000025811) MAOB (ENSPANG00000025805) ENSPANG00000032233 ENSPANG00000008948 ENSPANG00000037030 PPP1R2C (ENSPANG00000049960) CASK (ENSPANG00000008102) GPR82 (ENSPANG00000010850) GPR34 (ENSPANG00000015410) NYX (ENSPANG00000009956) ENSPANG00000011805 ##22 DDX3X (ENSPANG00000023917) ENSPANG00000050530 ENSPANG00000050425 USP9X (ENSPANG00000009041) ENSPANG00000049298 ENSPANG00000040156 ENSPANG00000010629 ENSPANG00000043492 MED14 (ENSPANG00000024675) CXorf38 (ENSPANG00000009515) ATP6AP2 (ENSPANG00000009876) ENSPANG00000003221 BCOR (ENSPANG00000023328) ENSPANG00000049183 MID1IP1 (ENSPANG00000010851) Rhinopithecus ANCESTRAL SPECIES 339 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a ##22 ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 Golden snub-nosed monkey MODERN SPECIES 1315 ENSRROG00000042386 ENSRROG00000029618 ENSRROG00000045633 SLC7A1 (ENSRROG00000035928) ENSRROG00000009770 UBL3 (ENSRROG00000044319) ENSRROG00000033132 ##22 KATNAL1 (ENSRROG00000034445) UBE2L5 (ENSRROG00000002278) ENSRROG00000033221 ENSRROG00000037184 USPL1 (ENSRROG00000004322) ALOX5AP (ENSRROG00000038443) MEDAG (ENSRROG00000039395) TEX26 (ENSRROG00000042882) HSPH1 (ENSRROG00000032648) B3GLCT (ENSRROG00000042904) RXFP2 (ENSRROG00000036551) FRY (ENSRROG00000037534) ZAR1L (ENSRROG00000028556) BRCA2 (ENSRROG00000039182) ENSRROG00000005500 Black snub-nosed monkey MODERN SPECIES 989 POU3F2 (ENSRBIG00000029294) FBXL4 (ENSRBIG00000038651) FAXC (ENSRBIG00000035827) COQ3 (ENSRBIG00000026935) PNISR (ENSRBIG00000015294) ENSRBIG00000037393 USP45 (ENSRBIG00000009680) CCNC (ENSRBIG00000033255) PRDM13 (ENSRBIG00000038028) MCHR2 (ENSRBIG00000034417) ENSRBIG00000032424 ##22 SIM1 (ENSRBIG00000025129) ENSRBIG00000042402 ENSRBIG00000008802 Simiiformes ANCESTRAL SPECIES ENSGT00940000155828.p ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000155828.p ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000155828.p ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155828.p ##22 Bolivian squirrel monkey MODERN SPECIES 45 TTC39A (ENSSBOG00000034095) EPS15 (ENSSBOG00000021478) OSBPL9 (ENSSBOG00000022113) ENSSBOG00000000079 RAB3B (ENSSBOG00000011518) TXNDC12 (ENSSBOG00000022535) ENSSBOG00000021947 ENSSBOG00000021281 ZFYVE9 (ENSSBOG00000035519) CC2D1B (ENSSBOG00000019712) ORC1 (ENSSBOG00000026616) PRPF38A (ENSSBOG00000019515) TUT4 (ENSSBOG00000013661) SHISAL2A (ENSSBOG00000032493) COA7 (ENSSBOG00000026955) ENSSBOG00000033961 ##22 ZYG11B (ENSSBOG00000028596) ZYG11A (ENSSBOG00000026783) ECHDC2 (ENSSBOG00000033599) SCP2 (ENSSBOG00000029047) PODN (ENSSBOG00000027780) SLC1A7 (ENSSBOG00000035725) CPT2 (ENSSBOG00000032010) CZIB (ENSSBOG00000029830) ENSSBOG00000022713 LRP8 (ENSSBOG00000028471) DMRTB1 (ENSSBOG00000035715) GLIS1 (ENSSBOG00000034908) NDC1 (ENSSBOG00000024069) YIPF1 (ENSSBOG00000025846) DIO1 (ENSSBOG00000002599) Tarsier MODERN SPECIES 2328 PRDX2 (ENSTSYG00000028395) #22 JUNB (ENSTSYG00000033881) #23 ENSTSYG00000029228 Strepsirrhini ANCESTRAL SPECIES 28 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 242 NACC1 (ENSOGAG00000031864) TRMT1 (ENSOGAG00000025576) LYL1 (ENSOGAG00000033339) #7 NFIX (ENSOGAG00000017133) #8 DAND5 (ENSOGAG00000026803) #9 GADD45GIP1 (ENSOGAG00000028560) #10 RAD23A (ENSOGAG00000007693) #11 CALR (ENSOGAG00000012249) #12 FARSA (ENSOGAG00000012243) #13 GCDH (ENSOGAG00000012240) #15 KLF1 (ENSOGAG00000025438) #16 DNASE2 (ENSOGAG00000034724) #17 MAST1 (ENSOGAG00000012223) #18 RTBDN (ENSOGAG00000012219) #19 RNASEH2A (ENSOGAG00000012214) #20 ENSOGAG00000024998 #22 JUNB (ENSOGAG00000025664) #23 HOOK2 (ENSOGAG00000028323) #24 BEST2 (ENSOGAG00000026961) #25 GET3 (ENSOGAG00000012205) #26 TRIR (ENSOGAG00000012203) #27 TNPO2 (ENSOGAG00000012192) #28 FBXW9 (ENSOGAG00000012187) #29 DHPS (ENSOGAG00000012805) #31 WDR83 (ENSOGAG00000012803) #32 WDR83OS (ENSOGAG00000012802) #33 MAN2B1 (ENSOGAG00000015392) #34 ZNF791 (ENSOGAG00000015391) #35 ENSOGAG00000005003 ##35 ZNF564 (ENSOGAG00000004779) #37 ENSOGAG00000032701 Bushbaby MODERN SPECIES 203 SAFB2 (ENSOGAG00000006855) SAFB (ENSOGAG00000027769) MICOS13 (ENSOGAG00000026645) HSD11B1L (ENSOGAG00000024555) ENSOGAG00000027049 LONP1 (ENSOGAG00000003930) CATSPERD (ENSOGAG00000011003) ENSOGAG00000029819 SPTLC1 (ENSOGAG00000014493) ROR2 (ENSOGAG00000026382) NFIL3 (ENSOGAG00000011750) ENSOGAG00000032987 AUH (ENSOGAG00000011749) SYK (ENSOGAG00000011743) DIRAS2 (ENSOGAG00000001184) ENSOGAG00000032500 #22 GADD45G (ENSOGAG00000002142) ENSOGAG00000032473 SEMA4D (ENSOGAG00000000321) SECISBP2 (ENSOGAG00000000317) CKS2 (ENSOGAG00000028843) SHC3 (ENSOGAG00000011519) S1PR3 (ENSOGAG00000011514) NXNL2 (ENSOGAG00000002167) SPIN1 (ENSOGAG00000002166) CDK20 (ENSOGAG00000008726) ENSOGAG00000012304 ENSOGAG00000027205 ZNF169 (ENSOGAG00000001828) PTPDC1 (ENSOGAG00000006733) BARX1 (ENSOGAG00000003345) Lemuriformes ANCESTRAL SPECIES 35 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Mouse lemur MODERN SPECIES 16 TRMT1 (ENSMICG00000000793) LYL1 (ENSMICG00000045046) #7 NFIX (ENSMICG00000000785) #8 DAND5 (ENSMICG00000046835) #9 GADD45GIP1 (ENSMICG00000038609) #10 RAD23A (ENSMICG00000016290) #11 CALR (ENSMICG00000016284) #12 FARSA (ENSMICG00000016272) #13 GCDH (ENSMICG00000016264) #15 SYCE2 (ENSMICG00000016268) #14 KLF1 (ENSMICG00000016260) #16 ENSMICG00000016255 #17 MAST1 (ENSMICG00000016221) #18 RTBDN (ENSMICG00000028676) #19 RNASEH2A (ENSMICG00000016430) #20 PRDX2 (ENSMICG00000016211) #22 JUNB (ENSMICG00000027217) #23 HOOK2 (ENSMICG00000016176) #24 BEST2 (ENSMICG00000037638) #25 GET3 (ENSMICG00000016170) #26 TRIR (ENSMICG00000027484) #27 TNPO2 (ENSMICG00000016153) #28 FBXW9 (ENSMICG00000016149) #29 ENSMICG00000042997 DHPS (ENSMICG00000005368) #31 WDR83 (ENSMICG00000045845) #32 WDR83OS (ENSMICG00000041694) #33 MAN2B1 (ENSMICG00000030973) #34 ZNF791 (ENSMICG00000001543) #35 ENSMICG00000027449 ##35 ZNF564 (ENSMICG00000031514) #37 Lemuriformes_a ANCESTRAL SPECIES 25 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164491 #36 ENSGT00940000164420 #37 Coquerels sifaka MODERN SPECIES 226 LYL1 (ENSPCOG00000027352) #7 NFIX (ENSPCOG00000015718) #8 DAND5 (ENSPCOG00000014620) #9 GADD45GIP1 (ENSPCOG00000008740) #10 RAD23A (ENSPCOG00000023819) #11 CALR (ENSPCOG00000027189) #12 FARSA (ENSPCOG00000014412) #13 SYCE2 (ENSPCOG00000023390) #14 GCDH (ENSPCOG00000027495) #15 KLF1 (ENSPCOG00000024775) #16 DNASE2 (ENSPCOG00000018438) #17 MAST1 (ENSPCOG00000010146) #18 RTBDN (ENSPCOG00000019035) #19 RNASEH2A (ENSPCOG00000003686) #20 THSD8 (ENSPCOG00000027163) #21 PRDX2 (ENSPCOG00000023441) #22 JUNB (ENSPCOG00000013392) #23 HOOK2 (ENSPCOG00000027579) #24 BEST2 (ENSPCOG00000025129) #25 GET3 (ENSPCOG00000027722) #26 TRIR (ENSPCOG00000027525) #27 TNPO2 (ENSPCOG00000018386) #28 FBXW9 (ENSPCOG00000024449) #29 ENSPCOG00000028753 DHPS (ENSPCOG00000028759) #31 WDR83 (ENSPCOG00000019048) #32 WDR83OS (ENSPCOG00000024280) #33 MAN2B1 (ENSPCOG00000018811) #34 ZNF791 (ENSPCOG00000015720) #35 ZNF490 (ENSPCOG00000008287) #36 ZNF564 (ENSPCOG00000027864) #37 Greater bamboo lemur DUPLICATION Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 930 ENSPSMG00000024366 ENSPSMG00000024360 ENSPSMG00000024357 #22 ENSPSMG00000024343 DIPK2B (ENSPSMG00000024329) KDM6A (ENSPSMG00000018596) ENSPSMG00000009118 Greater bamboo lemur MODERN SPECIES 124 ENSPSMG00000017964 #22 MAGI2 (ENSPSMG00000017940) PHTF2 (ENSPSMG00000017572) TMEM60 (ENSPSMG00000017377) ENSPSMG00000017369 PTPN12 (ENSPSMG00000017302) GSAP (ENSPSMG00000017187) FGL2 (ENSPSMG00000017080) CCDC146 (ENSPSMG00000017073) FAM185A (ENSPSMG00000017049) LRRC17 (ENSPSMG00000017023) FBXL13 (ENSPSMG00000017016) ARMC10 (ENSPSMG00000016975) NAPEPLD (ENSPSMG00000016900) PMPCB (ENSPSMG00000016879) DNAJC2 (ENSPSMG00000016789) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 2602 RTBDN (ENSPSMG00000003755) #19 RNASEH2A (ENSPSMG00000003775) #20 THSD8 (ENSPSMG00000003781) #21 ENSPSMG00000003806 #22 Greater bamboo lemur MODERN SPECIES 1094 SYT10 (ENSPSMG00000025328) ENSPSMG00000025331 #22 ENSPSMG00000025337 Euarchontoglires_A ANCESTRAL SPECIES 20 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Tree shrew MODERN SPECIES 3524 ENSTBEG00000012672 #22 Glires ANCESTRAL SPECIES 21 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Lagomorpha ANCESTRAL SPECIES 257 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00940000171026 ENSGT00390000010768 #20 ENSGT00940000155828 #22 Pika MODERN SPECIES 3130 CALR (ENSOPRG00000005026) #12 FARSA (ENSOPRG00000005004) #13 SYCE2 (ENSOPRG00000004989) #14 GCDH (ENSOPRG00000004974) #15 KLF1 (ENSOPRG00000004951) #16 DNASE2 (ENSOPRG00000004926) #17 MAST1 (ENSOPRG00000004857) #18 ENSOPRG00000004832 RNASEH2A (ENSOPRG00000004811) #20 PRDX2 (ENSOPRG00000004798) #22 Rodentia ANCESTRAL SPECIES 17 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Rodentia_B ANCESTRAL SPECIES 43 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 Kangaroo rat MODERN SPECIES 502 Cacna1a (ENSDORG00000010862) Nacc1 (ENSDORG00000003988) Trmt1 (ENSDORG00000014298) Lyl1 (ENSDORG00000029482) #7 Nfix (ENSDORG00000012235) #8 Dand5 (ENSDORG00000007059) #9 Rad23a (ENSDORG00000010116) #11 Calr (ENSDORG00000010117) #12 Farsa (ENSDORG00000010118) #13 Syce2 (ENSDORG00000009022) #14 Gcdh (ENSDORG00000009020) #15 Klf1 (ENSDORG00000009018) #16 Dnase2a (ENSDORG00000009016) #17 ENSDORG00000009013 #18 Rnaseh2a (ENSDORG00000009008) #20 Prdx2 (ENSDORG00000009005) #22 Hook2 (ENSDORG00000015001) #24 Best2 (ENSDORG00000015000) #25 Get3 (ENSDORG00000014999) #26 Trir (ENSDORG00000014997) #27 Tnpo2 (ENSDORG00000014993) #28 Fbxw9 (ENSDORG00000014991) #29 Gng14 (ENSDORG00000027251) ENSDORG00000014791 #31 Wdr83 (ENSDORG00000014787) #32 Wdr83os (ENSDORG00000025155) #33 ENSDORG00000028802 #34 Myomorpha ANCESTRAL SPECIES 52 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 234 ENSJJAG00000012119 Nacc1 (ENSJJAG00000000199) Trmt1 (ENSJJAG00000017154) Lyl1 (ENSJJAG00000015977) #7 Nfix (ENSJJAG00000012047) #8 Dand5 (ENSJJAG00000011222) #9 Rad23a (ENSJJAG00000000606) #11 Calr (ENSJJAG00000000115) #12 Syce2 (ENSJJAG00000021380) #14 Gcdh (ENSJJAG00000018993) #15 Klf1 (ENSJJAG00000004209) #16 Dnase2a (ENSJJAG00000000087) #17 ENSJJAG00000020016 #18 ENSJJAG00000019577 Rnaseh2a (ENSJJAG00000017547) #20 ENSJJAG00000016489 #22 Junb (ENSJJAG00000012180) #23 Hook2 (ENSJJAG00000015256) #24 Best2 (ENSJJAG00000018238) #25 Get3 (ENSJJAG00000017121) #26 Trir (ENSJJAG00000016895) #27 Tnpo2 (ENSJJAG00000016820) #28 Fbxw9 (ENSJJAG00000019917) #29 Gng14 (ENSJJAG00000019778) ENSJJAG00000019277 #31 Wdr83 (ENSJJAG00000015218) #32 Wdr83os (ENSJJAG00000020904) #33 ENSJJAG00000020733 #34 Lesser Egyptian jerboa MODERN SPECIES 51 Susd4 (ENSJJAG00000017970) Disp1 (ENSJJAG00000015868) Brox (ENSJJAG00000007298) Aida (ENSJJAG00000023815) ENSJJAG00000022254 Taf1a (ENSJJAG00000006299) Ptchd3 (ENSJJAG00000024292) ENSJJAG00000012961 Cr1l (ENSJJAG00000022966) ENSJJAG00000010379 ENSJJAG00000013299 Cd34 (ENSJJAG00000020811) Plxna2 (ENSJJAG00000017523) Camk1g (ENSJJAG00000006575) Lamb3 (ENSJJAG00000019254) ENSJJAG00000002823 #22 Hsd11b1 (ENSJJAG00000012713) ENSJJAG00000024101 ENSJJAG00000008116 A130010J15Rik (ENSJJAG00000009624) Irf6 (ENSJJAG00000023787) Utp25 (ENSJJAG00000024257) Syt14 (ENSJJAG00000020007) ENSJJAG00000015432 Hhat (ENSJJAG00000018726) Kcnh1 (ENSJJAG00000012317) Rcor3 (ENSJJAG00000013481) Traf5 (ENSJJAG00000023614) Muroidea ANCESTRAL SPECIES 60 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1738 Trmt1 (ENSNGAG00000022486) Lyl1 (ENSNGAG00000014673) #7 Nfix (ENSNGAG00000016724) #8 Dand5 (ENSNGAG00000021187) #9 Gadd45gip1 (ENSNGAG00000022030) #10 Rad23a (ENSNGAG00000022186) #11 Calr (ENSNGAG00000011286) #12 Farsa (ENSNGAG00000018353) #13 Syce2 (ENSNGAG00000023150) #14 Gcdh (ENSNGAG00000022070) #15 Klf1 (ENSNGAG00000022931) #16 Dnase2a (ENSNGAG00000022792) #17 Mast1 (ENSNGAG00000002377) #18 Rtbdn (ENSNGAG00000011358) #19 Rnaseh2a (ENSNGAG00000017988) #20 Prdx2 (ENSNGAG00000022496) #22 Junb (ENSNGAG00000006939) #23 Hook2 (ENSNGAG00000022705) #24 Best2 (ENSNGAG00000014058) #25 Get3 (ENSNGAG00000015555) #26 Trir (ENSNGAG00000017973) #27 Tnpo2 (ENSNGAG00000000650) #28 ENSNGAG00000017579 #29 Gng14 (ENSNGAG00000018951) ENSNGAG00000008057 #31 Wdr83 (ENSNGAG00000001041) #32 Wdr83os (ENSNGAG00000022509) #33 ENSNGAG00000022764 #34 ENSNGAG00000005762 #35 ENSNGAG00000020517 Muroidea_A ANCESTRAL SPECIES 16 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164424 ENSGT00390000007315 Cricetidae ANCESTRAL SPECIES 7 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00940000164424 ENSGT00390000007315 ENSGT00390000007370 Cricetinae ANCESTRAL SPECIES 40 ENSGT00940000159327 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 Golden Hamster MODERN SPECIES 877 Cacna1a (ENSMAUG00000008037) Nacc1 (ENSMAUG00000004663) Trmt1 (ENSMAUG00000011134) Nfix (ENSMAUG00000018106) #8 Dand5 (ENSMAUG00000020203) #9 Gadd45gip1 (ENSMAUG00000001145) #10 Rad23a (ENSMAUG00000009327) #11 Farsa (ENSMAUG00000009188) #13 ENSMAUG00000000609 Syce2 (ENSMAUG00000015586) #14 Gcdh (ENSMAUG00000012276) #15 Klf1 (ENSMAUG00000021937) #16 Dnase2a (ENSMAUG00000012610) #17 Mast1 (ENSMAUG00000001337) #18 ENSMAUG00000021740 #20 Prdx2 (ENSMAUG00000005262) #22 Junb (ENSMAUG00000004233) #23 Hook2 (ENSMAUG00000013561) #24 Best2 (ENSMAUG00000010704) #25 Trir (ENSMAUG00000019320) #27 ENSMAUG00000007313 #28 Fbxw9 (ENSMAUG00000020565) #29 Gng14 (ENSMAUG00000001143) Dhps (ENSMAUG00000001398) #31 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 347 Nacc1 (ENSCGRG00001016498) Trmt1 (ENSCGRG00001022594) Lyl1 (ENSCGRG00001020161) #7 Nfix (ENSCGRG00001013186) #8 Dand5 (ENSCGRG00001000588) #9 Gadd45gip1 (ENSCGRG00001000298) #10 Rad23a (ENSCGRG00001020853) #11 Calr (ENSCGRG00001020181) #12 Farsa (ENSCGRG00001019769) #13 Syce2 (ENSCGRG00001013520) #14 Gcdh (ENSCGRG00001012582) #15 Klf1 (ENSCGRG00001011893) #16 Dnase2a (ENSCGRG00001011489) #17 Mast1 (ENSCGRG00001012818) #18 Rnaseh2a (ENSCGRG00001005021) #20 PRDX2 (ENSCGRG00001001765) #22 Junb (ENSCGRG00001015135) #23 Hook2 (ENSCGRG00001021145) #24 Best2 (ENSCGRG00001016555) #25 ASNA1 (ENSCGRG00001015158) #26 Trir (ENSCGRG00001014029) #27 Tnpo2 (ENSCGRG00001015917) #28 Fbxw9 (ENSCGRG00001014378) #29 Gng14 (ENSCGRG00001013712) Dhps (ENSCGRG00001013178) #31 Wdr83 (ENSCGRG00001012536) #32 Wdr83os (ENSCGRG00001011873) #33 Man2b1 (ENSCGRG00001022182) #34 ENSCGRG00001021004 ENSCGRG00001020030 Chinese hamster chok1gshd MODERN SPECIES 1 Zmat4 (ENSCGRG00001016583) Sfrp1 (ENSCGRG00001017613) ENSCGRG00001020215 Gins4 (ENSCGRG00001016717) Gpat4 (ENSCGRG00001017830) Nkx6-3 (ENSCGRG00001018532) Ank1 (ENSCGRG00001021732) Kat6a (ENSCGRG00001019602) Ap3m2 (ENSCGRG00001020086) Plat (ENSCGRG00001021037) Ikbkb (ENSCGRG00001017718) Polb (ENSCGRG00001018504) Dkk4 (ENSCGRG00001018975) ENSCGRG00001019651 Slc20a2 (ENSCGRG00001007297) ENSCGRG00001008544 #22 Smim19 (ENSCGRG00001013840) Mrps31 (ENSCGRG00001014160) ENSCGRG00001004965 ENSCGRG00001015230 Tpte (ENSCGRG00001016028) Thsd1 (ENSCGRG00001021322) Vps36 (ENSCGRG00001022167) Ckap2 (ENSCGRG00001023062) Nek3 (ENSCGRG00001004635) Nek5 (ENSCGRG00001024708) ENSCGRG00001023830 Atp7b (ENSCGRG00001019712) Ccdc70 (ENSCGRG00001005698) Atg5 (ENSCGRG00001022743) Prdm1 (ENSCGRG00001023291) Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00940000164424 ENSGT00390000007315 ENSGT00390000007370 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 98 Cd209a (ENSMOCG00000013815) Clec4g (ENSMOCG00000007606) ENSMOCG00000009634 Dand5 (ENSMOCG00000006477) #9 Gadd45gip1 (ENSMOCG00000017223) #10 Rad23a (ENSMOCG00000008410) #11 Calr (ENSMOCG00000003128) #12 Farsa (ENSMOCG00000011399) #13 Syce2 (ENSMOCG00000016839) #14 Gcdh (ENSMOCG00000005123) #15 Klf1 (ENSMOCG00000015689) #16 Dnase2a (ENSMOCG00000001379) #17 Mast1 (ENSMOCG00000015813) #18 Rtbdn (ENSMOCG00000002540) #19 Rnaseh2a (ENSMOCG00000017408) #20 ENSMOCG00000020752 #22 Junb (ENSMOCG00000003238) #23 Hook2 (ENSMOCG00000014258) #24 Best2 (ENSMOCG00000006958) #25 Get3 (ENSMOCG00000002658) #26 Trir (ENSMOCG00000009371) #27 Tnpo2 (ENSMOCG00000016489) #28 ENSMOCG00000003557 #29 Gng14 (ENSMOCG00000002530) Dhps (ENSMOCG00000020268) #31 Wdr83 (ENSMOCG00000015572) #32 Wdr83os (ENSMOCG00000000084) #33 Man2b1 (ENSMOCG00000019337) #34 ENSMOCG00000006321 Vps35 (ENSMOCG00000002997) Orc6 (ENSMOCG00000020756) Prairie vole MODERN SPECIES 15 Gosr1 (ENSMOCG00000011008) Cpd (ENSMOCG00000011977) ENSMOCG00000008686 Blmh (ENSMOCG00000007175) Slc6a4 (ENSMOCG00000004407) Nsrp1 (ENSMOCG00000019716) ENSMOCG00000016597 Efcab5 (ENSMOCG00000006093) ENSMOCG00000006899 Coro6 (ENSMOCG00000013111) Ankrd13b (ENSMOCG00000008806) Git1 (ENSMOCG00000011144) Trp53i13 (ENSMOCG00000006130) ENSMOCG00000012497 Abhd15 (ENSMOCG00000020292) ENSMOCG00000002833 #22 Taok1 (ENSMOCG00000007289) Nufip2 (ENSMOCG00000022086) Cryba1 (ENSMOCG00000009961) ENSMOCG00000002378 Myo18a (ENSMOCG00000022942) Pipox (ENSMOCG00000020266) Sez6 (ENSMOCG00000022144) Phf12 (ENSMOCG00000009540) Dhrs13 (ENSMOCG00000003764) Flot2 (ENSMOCG00000002050) Eral1 (ENSMOCG00000022786) Fam222b (ENSMOCG00000002697) Traf4 (ENSMOCG00000022716) Nek8 (ENSMOCG00000005323) Tlcd1 (ENSMOCG00000022875) Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000029305 Nfix (ENSPEMG00000011765) #8 Dand5 (ENSPEMG00000017061) #9 Gadd45gip1 (ENSPEMG00000011904) #10 Rad23a (ENSPEMG00000006140) #11 Calr (ENSPEMG00000001949) #12 Farsa (ENSPEMG00000012560) #13 Syce2 (ENSPEMG00000016357) #14 Gcdh (ENSPEMG00000009103) #15 Klf1 (ENSPEMG00000017635) #16 Dnase2a (ENSPEMG00000000677) #17 Mast1 (ENSPEMG00000010588) #18 Rtbdn (ENSPEMG00000024999) #19 Rnaseh2a (ENSPEMG00000018009) #20 Gm49661 (ENSPEMG00000029668) #21 Prdx2 (ENSPEMG00000000538) #22 Junb (ENSPEMG00000006961) #23 Hook2 (ENSPEMG00000009962) #24 Best2 (ENSPEMG00000015867) #25 Get3 (ENSPEMG00000016543) #26 Trir (ENSPEMG00000016449) #27 Tnpo2 (ENSPEMG00000018702) #28 Fbxw9 (ENSPEMG00000017063) #29 Gng14 (ENSPEMG00000029438) Dhps (ENSPEMG00000019124) #31 Wdr83 (ENSPEMG00000014294) #32 Wdr83os (ENSPEMG00000025345) #33 ENSPEMG00000025750 ENSPEMG00000026081 ENSPEMG00000025354 Or7c19 (ENSPEMG00000024814) Murinae DUPLICATION Murinae DUPLICATION Murinae ANCESTRAL SPECIES 15 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.h #22 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164424 ENSGT00390000007315 Mus ANCESTRAL SPECIES 6 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.h #22 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164424 ENSGT00390000007315 Mus_A ANCESTRAL SPECIES 8 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164424 ENSGT00390000007315 Mus_B ANCESTRAL SPECIES 6 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164424 ENSGT00390000007315 Mouse MODERN SPECIES 17 Nfix (ENSMUSG00000001911) #8 Lyl1 (ENSMUSG00000034041) #7 Dand5 (ENSMUSG00000053226) #9 Gadd45gip1 (ENSMUSG00000033751) #10 Rad23a (ENSMUSG00000003813) #11 Calr (ENSMUSG00000003814) #12 Farsa (ENSMUSG00000003808) #13 Syce2 (ENSMUSG00000003824) #14 Gcdh (ENSMUSG00000003809) #15 Klf1 (ENSMUSG00000054191) #16 Dnase2a (ENSMUSG00000003812) #17 Mast1 (ENSMUSG00000053693) #18 Rtbdn (ENSMUSG00000048617) #19 Rnaseh2a (ENSMUSG00000052926) #20 Gm49661 (ENSMUSG00000111184) #21 Prdx2 (ENSMUSG00000005161) #22 Junb (ENSMUSG00000052837) #23 Hook2 (ENSMUSG00000052566) #24 Best2 (ENSMUSG00000052819) #25 Get3 (ENSMUSG00000052456) #26 Trir (ENSMUSG00000041203) #27 Tnpo2 (ENSMUSG00000031691) #28 Fbxw9 (ENSMUSG00000008167) #29 Gng14 (ENSMUSG00000095845) Dhps (ENSMUSG00000060038) #31 Wdr83 (ENSMUSG00000005150) #32 Wdr83os (ENSMUSG00000059355) #33 Man2b1 (ENSMUSG00000005142) #34 Zfp791 (ENSMUSG00000074194) #35 Cks1brt (ENSMUSG00000062687) Or7c19 (ENSMUSG00000051952) Mus_C ANCESTRAL SPECIES 5 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00940000157455.z ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.h #22 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00940000164424 ENSGT00390000007315 Steppe mouse MODERN SPECIES 2800 Nfix (ENSMSIG00000014176) #8 Dand5 (ENSMSIG00000014166) #9 Gadd45gip1 (ENSMSIG00000014154) #10 Rad23a (ENSMSIG00000014128) #11 ENSMSIG00000014123 #12 ENSMSIG00000014114 Farsa (ENSMSIG00000014035) #13 Syce2 (ENSMSIG00000013998) #14 Gcdh (ENSMSIG00000013969) #15 Klf1 (ENSMSIG00000013957) #16 Dnase2a (ENSMSIG00000013905) #17 ENSMSIG00000013886 #18 Rtbdn (ENSMSIG00000013845) #19 Rnaseh2a (ENSMSIG00000013788) #20 Gm49661 (ENSMSIG00000013769) #21 Prdx2 (ENSMSIG00000013681) #22 Junb (ENSMSIG00000013671) #23 Hook2 (ENSMSIG00000013603) #24 Get3 (ENSMSIG00000013568) #26 Trir (ENSMSIG00000013540) #27 Tnpo2 (ENSMSIG00000013409) #28 Fbxw9 (ENSMSIG00000013376) #29 Gng14 (ENSMSIG00000013367) Dhps (ENSMSIG00000013355) #31 Wdr83 (ENSMSIG00000013337) #32 Wdr83os (ENSMSIG00000013323) #33 Man2b1 (ENSMSIG00000013254) #34 ENSMSIG00000013245 Zfp791 (ENSMSIG00000013223) #35 ENSMSIG00000013214 Cks1brt (ENSMSIG00000013203) Ryukyu mouse MODERN SPECIES 17 Nfix (MGP_CAROLIEiJ_G0031305) #8 Lyl1 (MGP_CAROLIEiJ_G0031306) #7 MGP_CAROLIEiJ_G0031307 Dand5 (MGP_CAROLIEiJ_G0031308) #9 Gadd45gip1 (MGP_CAROLIEiJ_G0031309) #10 Rad23a (MGP_CAROLIEiJ_G0031310) #11 Calr (MGP_CAROLIEiJ_G0031311) #12 Farsa (MGP_CAROLIEiJ_G0031312) #13 Syce2 (MGP_CAROLIEiJ_G0031313) #14 Gcdh (MGP_CAROLIEiJ_G0031314) #15 Klf1 (MGP_CAROLIEiJ_G0031315) #16 Dnase2a (MGP_CAROLIEiJ_G0031316) #17 Mast1 (MGP_CAROLIEiJ_G0031317) #18 Rtbdn (MGP_CAROLIEiJ_G0031318) #19 MGP_CAROLIEiJ_G0031319 #20 Prdx2 (MGP_CAROLIEiJ_G0031320) #22 Junb (MGP_CAROLIEiJ_G0031321) #23 Hook2 (MGP_CAROLIEiJ_G0031322) #24 Best2 (MGP_CAROLIEiJ_G0031323) #25 Get3 (MGP_CAROLIEiJ_G0031324) #26 Trir (MGP_CAROLIEiJ_G0031325) #27 Tnpo2 (MGP_CAROLIEiJ_G0031326) #28 Fbxw9 (MGP_CAROLIEiJ_G0031327) #29 Gng14 (MGP_CAROLIEiJ_G0031328) Dhps (MGP_CAROLIEiJ_G0031329) #31 Wdr83 (MGP_CAROLIEiJ_G0031330) #32 Wdr83os (MGP_CAROLIEiJ_G0031331) #33 Man2b1 (MGP_CAROLIEiJ_G0031332) #34 Zfp791 (MGP_CAROLIEiJ_G0031333) #35 Or7c19 (MGP_CAROLIEiJ_G0031334) Vps35 (MGP_CAROLIEiJ_G0031335) Rat MODERN SPECIES 10 Trmt1 (ENSRNOG00000002914) Lyl1 (ENSRNOG00000002950) #7 Nfix (ENSRNOG00000002983) #8 Dand5 (ENSRNOG00000033368) #9 Gadd45gip1 (ENSRNOG00000003011) #10 Rad23a (ENSRNOG00000003026) #11 Calr (ENSRNOG00000003029) #12 Farsa (ENSRNOG00000003149) #13 Gcdh (ENSRNOG00000003307) #15 Klf1 (ENSRNOG00000003443) #16 Dnase2 (ENSRNOG00000023830) #17 MAST1 (ENSRNOG00000003469) #18 Rtbdn (ENSRNOG00000043215) #19 Rnaseh2a (ENSRNOG00000068063) #20 Thsd8 (ENSRNOG00000003504) #21 Prdx2 (ENSRNOG00000003520) #22 Hook2 (ENSRNOG00000003682) #24 Best2 (ENSRNOG00000003737) #25 Get3 (ENSRNOG00000003747) #26 Trir (ENSRNOG00000003863) #27 Tnpo2 (ENSRNOG00000003970) #28 Fbxw9 (ENSRNOG00000004212) #29 Gng14 (ENSRNOG00000023899) Dhps (ENSRNOG00000004219) #31 Wdr83 (ENSRNOG00000004287) #32 Man2b1 (ENSRNOG00000023910) #34 Zfp791 (ENSRNOG00000023920) #35 LOC108348296 (ENSRNOG00000046751) ENSRNOG00000064909 LOC120098580 (ENSRNOG00000064578) ENSRNOG00000065746 Murinae ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus_A ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus_B ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus_C ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Steppe mouse MODERN SPECIES 2989 Cntnap5b (ENSMSIG00000024827) ENSMSIG00000024893 #22 Murinae ANCESTRAL SPECIES 15 ENSGT00940000162404 #7 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.h #22 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 Mus ANCESTRAL SPECIES 6 ENSGT00940000162404 #7 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.h #22 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 Shrew mouse MODERN SPECIES 12 Nacc1 (MGP_PahariEiJ_G0022909) Lyl1 (MGP_PahariEiJ_G0022911) #7 Nfix (MGP_PahariEiJ_G0022912) #8 Dand5 (MGP_PahariEiJ_G0022913) #9 Gadd45gip1 (MGP_PahariEiJ_G0022914) #10 Rad23a (MGP_PahariEiJ_G0022915) #11 Calr (MGP_PahariEiJ_G0022916) #12 Farsa (MGP_PahariEiJ_G0022917) #13 Syce2 (MGP_PahariEiJ_G0022918) #14 Gcdh (MGP_PahariEiJ_G0022919) #15 Klf1 (MGP_PahariEiJ_G0022920) #16 Dnase2a (MGP_PahariEiJ_G0022921) #17 Mast1 (MGP_PahariEiJ_G0022922) #18 MGP_PahariEiJ_G0022923 #19 Rnaseh2a (MGP_PahariEiJ_G0022924) #20 MGP_PahariEiJ_G0022925 #22 Junb (MGP_PahariEiJ_G0022926) #23 Hook2 (MGP_PahariEiJ_G0022927) #24 Best2 (MGP_PahariEiJ_G0022928) #25 Get3 (MGP_PahariEiJ_G0022929) #26 Trir (MGP_PahariEiJ_G0022930) #27 Tnpo2 (MGP_PahariEiJ_G0022931) #28 Fbxw9 (MGP_PahariEiJ_G0022932) #29 Gng14 (MGP_PahariEiJ_G0022933) Dhps (MGP_PahariEiJ_G0022934) #31 Wdr83 (MGP_PahariEiJ_G0022935) #32 Man2b1 (MGP_PahariEiJ_G0022936) #34 Zfp791 (MGP_PahariEiJ_G0022937) #35 Or7c19 (MGP_PahariEiJ_G0022938) Vps35 (MGP_PahariEiJ_G0022939) Orc6 (MGP_PahariEiJ_G0022940) Mus_A ANCESTRAL SPECIES ENSGT00940000155828.h #22 Mus_B ANCESTRAL SPECIES ENSGT00940000155828.h #22 Mus_C ANCESTRAL SPECIES 5 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00940000157455.z ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.d #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828.h #22 ENSGT00870000137755 #21 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 Steppe mouse MODERN SPECIES 3168 Cbln2 (ENSMSIG00000024262) Neto1 (ENSMSIG00000024230) ENSMSIG00000024214 ENSMSIG00000024189 ENSMSIG00000024186 ENSMSIG00000024175 #22 Timm21 (ENSMSIG00000024148) Fbxo15 (ENSMSIG00000024100) Cyb5a (ENSMSIG00000024084) Gm17266 (ENSMSIG00000024036) ENSMSIG00000024020 Cndp2 (ENSMSIG00000023966) spretus MODERN SPECIES 17 Lyl1 (MGP_SPRETEiJ_G0032424) #7 MGP_SPRETEiJ_G0032425 Dand5 (MGP_SPRETEiJ_G0032426) #9 Gadd45gip1 (MGP_SPRETEiJ_G0032427) #10 Rad23a (MGP_SPRETEiJ_G0032428) #11 Calr (MGP_SPRETEiJ_G0032429) #12 MGP_SPRETEiJ_G0032430 Farsa (MGP_SPRETEiJ_G0032431) #13 Syce2 (MGP_SPRETEiJ_G0032432) #14 Gcdh (MGP_SPRETEiJ_G0032433) #15 Klf1 (MGP_SPRETEiJ_G0032434) #16 Dnase2a (MGP_SPRETEiJ_G0032435) #17 Mast1 (MGP_SPRETEiJ_G0032436) #18 Rtbdn (MGP_SPRETEiJ_G0032437) #19 Rnaseh2a (MGP_SPRETEiJ_G0032438) #20 MGP_SPRETEiJ_G0032439 #22 Junb (MGP_SPRETEiJ_G0032440) #23 Hook2 (MGP_SPRETEiJ_G0032441) #24 Best2 (MGP_SPRETEiJ_G0032442) #25 Get3 (MGP_SPRETEiJ_G0032443) #26 Trir (MGP_SPRETEiJ_G0032444) #27 Tnpo2 (MGP_SPRETEiJ_G0032445) #28 Fbxw9 (MGP_SPRETEiJ_G0032446) #29 Gng14 (MGP_SPRETEiJ_G0032447) Dhps (MGP_SPRETEiJ_G0032448) #31 Wdr83 (MGP_SPRETEiJ_G0032449) #32 Wdr83os (MGP_SPRETEiJ_G0032450) #33 Man2b1 (MGP_SPRETEiJ_G0032451) #34 Zfp791 (MGP_SPRETEiJ_G0032452) #35 Or7c19 (MGP_SPRETEiJ_G0032453) Vps35 (MGP_SPRETEiJ_G0032454) Rodentia_A ANCESTRAL SPECIES 16 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Hystricomorpha ANCESTRAL SPECIES 55 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.k.b #12 ENSGT00950000182915.b.b.a.a.l #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 Hystricomorpha_a ANCESTRAL SPECIES 15 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.k.b #12 ENSGT00950000182915.b.b.a.a.l #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.k.b #12 ENSGT00950000182915.b.b.a.a.l #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00390000003094 ENSGT00660000095541.a.a ENSGT00390000013968 Degu MODERN SPECIES 114 LYL1 (ENSODEG00000010992) #7 NFIX (ENSODEG00000010171) #8 ENSODEG00000010129 GADD45GIP1 (ENSODEG00000010728) #10 RAD23A (ENSODEG00000011287) #11 CALR (ENSODEG00000010711) #12 FARSA (ENSODEG00000010433) #13 ENSODEG00000010928 #14 GCDH (ENSODEG00000010247) #15 KLF1 (ENSODEG00000009692) #16 DNASE2 (ENSODEG00000009845) #17 ENSODEG00000011144 #18 ENSODEG00000012916 RTBDN (ENSODEG00000011942) #19 RNASEH2A (ENSODEG00000009772) #20 PRDX2 (ENSODEG00000009999) #22 JUNB (ENSODEG00000019944) #23 HOOK2 (ENSODEG00000011305) #24 BEST2 (ENSODEG00000010248) #25 GET3 (ENSODEG00000010662) #26 TRIR (ENSODEG00000010879) #27 TNPO2 (ENSODEG00000009670) #28 FBXW9 (ENSODEG00000010372) #29 ENSODEG00000013891 ENSODEG00000011490 DHPS (ENSODEG00000010756) #31 WDR83 (ENSODEG00000010258) #32 WDR83OS (ENSODEG00000011674) #33 MAN2B1 (ENSODEG00000010434) #34 ENSODEG00000012183 ENSODEG00000012295 Long-tailed chinchilla MODERN SPECIES 122 TRMT1 (ENSCLAG00000015295) LYL1 (ENSCLAG00000014483) #7 NFIX (ENSCLAG00000013479) #8 DAND5 (ENSCLAG00000011402) #9 GADD45GIP1 (ENSCLAG00000015799) #10 RAD23A (ENSCLAG00000016638) #11 CALR (ENSCLAG00000012923) #12 FARSA (ENSCLAG00000015489) #13 SYCE2 (ENSCLAG00000014420) #14 GCDH (ENSCLAG00000015590) #15 KLF1 (ENSCLAG00000013218) #16 DNASE2 (ENSCLAG00000012983) #17 MAST1 (ENSCLAG00000012224) #18 RTBDN (ENSCLAG00000014391) #19 RNASEH2A (ENSCLAG00000014930) #20 PRDX2 (ENSCLAG00000013924) #22 JUNB (ENSCLAG00000018028) #23 HOOK2 (ENSCLAG00000012972) #24 BEST2 (ENSCLAG00000012820) #25 GET3 (ENSCLAG00000011393) #26 TRIR (ENSCLAG00000011164) #27 TNPO2 (ENSCLAG00000013442) #28 ENSCLAG00000011841 FBXW9 (ENSCLAG00000012587) #29 DHPS (ENSCLAG00000012256) #31 WDR83 (ENSCLAG00000012198) #32 ENSCLAG00000011821 #33 MAN2B1 (ENSCLAG00000013086) #34 ZNF333 (ENSCLAG00000014959) NANP (ENSCLAG00000014668) NINL (ENSCLAG00000011605) Guinea pig MODERN SPECIES 42 NACC1 (ENSCPOG00000022222) TRMT1 (ENSCPOG00000011754) LYL1 (ENSCPOG00000036111) #7 NFIX (ENSCPOG00000022563) #8 RAD23A (ENSCPOG00000037407) #11 GADD45GIP1 (ENSCPOG00000024072) #10 CALR (ENSCPOG00000000791) #12 FARSA (ENSCPOG00000000787) #13 ENSCPOG00000033097 #14 GCDH (ENSCPOG00000027058) #15 KLF1 (ENSCPOG00000000784) #16 DNASE2 (ENSCPOG00000000783) #17 MAST1 (ENSCPOG00000000777) #18 RTBDN (ENSCPOG00000000774) #19 RNASEH2A (ENSCPOG00000038877) #20 PRDX2 (ENSCPOG00000023583) #22 JUNB (ENSCPOG00000020703) #23 HOOK2 (ENSCPOG00000000771) #24 BEST2 (ENSCPOG00000000768) #25 GET3 (ENSCPOG00000026971) #26 TRIR (ENSCPOG00000003765) #27 TNPO2 (ENSCPOG00000007033) #28 FBXW9 (ENSCPOG00000007026) #29 ENSCPOG00000033374 DHPS (ENSCPOG00000002309) #31 WDR83 (ENSCPOG00000002306) #32 WDR83OS (ENSCPOG00000022365) #33 MAN2B1 (ENSCPOG00000002295) #34 ENSCPOG00000023273 ENSCPOG00000027337 ENSCPOG00000023880 Sciuridae ANCESTRAL SPECIES 20 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Eurasian red squirrel MODERN SPECIES 7 LYL1 (ENSSVLG00005018485) #7 NFIX (ENSSVLG00005018211) #8 DAND5 (ENSSVLG00005018136) #9 GADD45GIP1 (ENSSVLG00005018098) #10 RAD23A (ENSSVLG00005018009) #11 CALR (ENSSVLG00005017951) #12 FARSA (ENSSVLG00005017880) #13 ENSSVLG00005017827 #14 GCDH (ENSSVLG00005017674) #15 KLF1 (ENSSVLG00005017619) #16 DNASE2 (ENSSVLG00005017585) #17 MAST1 (ENSSVLG00005017111) #18 RTBDN (ENSSVLG00005016997) #19 RNASEH2A (ENSSVLG00005016950) #20 THSD8 (ENSSVLG00005016905) #21 PRDX2 (ENSSVLG00005016837) #22 JUNB (ENSSVLG00005025317) #23 HOOK2 (ENSSVLG00005025297) #24 BEST2 (ENSSVLG00005025274) #25 ENSSVLG00005025252 #26 TRIR (ENSSVLG00005025236) #27 TNPO2 (ENSSVLG00005025206) #28 FBXW9 (ENSSVLG00005025161) #29 ENSSVLG00005025134 DHPS (ENSSVLG00005025110) #31 ENSSVLG00005025092 #32 ENSSVLG00005025070 #33 ENSSVLG00005025050 #34 ENSSVLG00005025025 ##35 ENSSVLG00005025001 ##35 ENSSVLG00005024969 ##35 Marmotini ANCESTRAL SPECIES 41 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.b ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 24 LYL1 (ENSMMMG00000021069) #7 NFIX (ENSMMMG00000021044) #8 DAND5 (ENSMMMG00000021038) #9 GADD45GIP1 (ENSMMMG00000021032) #10 ENSMMMG00000021016 #11 CALR (ENSMMMG00000021010) #12 FARSA (ENSMMMG00000020996) #13 SYCE2 (ENSMMMG00000020981) #14 GCDH (ENSMMMG00000020963) #15 KLF1 (ENSMMMG00000020960) #16 DNASE2 (ENSMMMG00000020947) #17 MAST1 (ENSMMMG00000020911) #18 RTBDN (ENSMMMG00000020903) #19 RNASEH2A (ENSMMMG00000020879) #20 THSD8 (ENSMMMG00000020877) #21 ENSMMMG00000020873 #22 JUNB (ENSMMMG00000020869) #23 HOOK2 (ENSMMMG00000020811) #24 BEST2 (ENSMMMG00000020790) #25 GET3 (ENSMMMG00000020781) #26 TRIR (ENSMMMG00000020777) #27 TNPO2 (ENSMMMG00000020726) #28 FBXW9 (ENSMMMG00000020717) #29 ENSMMMG00000020713 DHPS (ENSMMMG00000020706) #31 WDR83 (ENSMMMG00000020697) #32 WDR83OS (ENSMMMG00000020687) #33 MAN2B1 (ENSMMMG00000020653) #34 ENSMMMG00000020633 ##35 ENSMMMG00000020539 ##35 ACP5 (ENSMMMG00000020512) Alpin marmot MODERN SPECIES 94 ENSMMMG00000023507 ENSMMMG00000023510 ENSMMMG00000023512 ENSMMMG00000023513 ENSMMMG00000023515 DEFB1 (ENSMMMG00000023517) XKR5 (ENSMMMG00000023518) AGPAT5 (ENSMMMG00000023520) MCPH1 (ENSMMMG00000023526) ANGPT2 (ENSMMMG00000023533) CSMD1 (ENSMMMG00000023540) MYOM2 (ENSMMMG00000023553) ARHGEF10 (ENSMMMG00000023568) CLN8 (ENSMMMG00000023580) DLGAP2 (ENSMMMG00000023583) ENSMMMG00000023607 #22 ENSMMMG00000023609 TDRP (ENSMMMG00000023610) FBXO25 (ENSMMMG00000023611) Marmotini_b ANCESTRAL SPECIES 40 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.b ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 ENSGT00390000016735 Squirrel DUPLICATION Squirrel MODERN SPECIES 259 TRMT1 (ENSSTOG00000012531) LYL1 (ENSSTOG00000028401) #7 NFIX (ENSSTOG00000007848) #8 DAND5 (ENSSTOG00000016420) #9 GADD45GIP1 (ENSSTOG00000016419) #10 RAD23A (ENSSTOG00000024117) #11 CALR (ENSSTOG00000008774) #12 FARSA (ENSSTOG00000008748) #13 SYCE2 (ENSSTOG00000008737) #14 GCDH (ENSSTOG00000008724) #15 KLF1 (ENSSTOG00000021956) #16 DNASE2 (ENSSTOG00000008712) #17 MAST1 (ENSSTOG00000008668) #18 Rtbdn (ENSSTOG00000006228) #19 RNASEH2A (ENSSTOG00000006224) #20 ENSSTOG00000025862 #22 JUNB (ENSSTOG00000031929) #23 HOOK2 (ENSSTOG00000011709) #24 BEST2 (ENSSTOG00000019471) #25 GET3 (ENSSTOG00000006992) #26 TRIR (ENSSTOG00000006978) #27 TNPO2 (ENSSTOG00000006952) #28 FBXW9 (ENSSTOG00000006921) #29 ENSSTOG00000030269 DHPS (ENSSTOG00000006900) #31 WDR83 (ENSSTOG00000006883) #32 WDR83OS (ENSSTOG00000006874) #33 MAN2B1 (ENSSTOG00000029598) #34 ENSSTOG00000034910 ##35 ZNF709 (ENSSTOG00000029196) ##35 ACP5 (ENSSTOG00000003699) Squirrel MODERN SPECIES 122 NDC1 (ENSSTOG00000002596) GLIS1 (ENSSTOG00000024363) DMRTB1 (ENSSTOG00000007187) ENSSTOG00000020556 LRP8 (ENSSTOG00000001256) MAGOH (ENSSTOG00000001253) CPT2 (ENSSTOG00000016415) SLC1A7 (ENSSTOG00000020054) PODN (ENSSTOG00000010433) SCP2 (ENSSTOG00000022003) ECHDC2 (ENSSTOG00000010402) ZYG11A (ENSSTOG00000021997) ZYG11B (ENSSTOG00000008067) COA7 (ENSSTOG00000008063) SHISAL2A (ENSSTOG00000026416) ENSSTOG00000023745 #22 GPX7 (ENSSTOG00000023247) TUT4 (ENSSTOG00000015611) PRPF38A (ENSSTOG00000015610) ORC1 (ENSSTOG00000015591) CC2D1B (ENSSTOG00000015584) ZFYVE9 (ENSSTOG00000026884) ENSSTOG00000025134 BTF3L4 (ENSSTOG00000006129) TXNDC12 (ENSSTOG00000006093) ENSSTOG00000032439 RAB3B (ENSSTOG00000016470) NRDC (ENSSTOG00000000706) ENSSTOG00000000692 ENSSTOG00000022882 ##12 ENSSTOG00000023598 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 217 ENSUPAG00010008329 NFIX (ENSUPAG00010008230) #8 DAND5 (ENSUPAG00010008227) #9 GADD45GIP1 (ENSUPAG00010008222) #10 RAD23A (ENSUPAG00010008197) #11 CALR (ENSUPAG00010008184) #12 FARSA (ENSUPAG00010008158) #13 SYCE2 (ENSUPAG00010008135) #14 GCDH (ENSUPAG00010008102) #15 KLF1 (ENSUPAG00010008092) #16 DNASE2 (ENSUPAG00010008053) #17 MAST1 (ENSUPAG00010007994) #18 RTBDN (ENSUPAG00010007981) #19 RNASEH2A (ENSUPAG00010007909) #20 THSD8 (ENSUPAG00010007901) #21 ENSUPAG00010007882 #22 JUNB (ENSUPAG00010007878) #23 HOOK2 (ENSUPAG00010007823) #24 BEST2 (ENSUPAG00010007798) #25 GET3 (ENSUPAG00010007783) #26 TRIR (ENSUPAG00010007779) #27 TNPO2 (ENSUPAG00010007721) #28 FBXW9 (ENSUPAG00010007705) #29 ENSUPAG00010007702 DHPS (ENSUPAG00010007686) #31 WDR83 (ENSUPAG00010007673) #32 WDR83OS (ENSUPAG00010007669) #33 MAN2B1 (ENSUPAG00010007651) #34 ENSUPAG00010007643 ##35 ENSUPAG00010007642 ##35 ENSUPAG00010007638 ##35 Arctic ground squirrel MODERN SPECIES 21 GLIS1 (ENSUPAG00010021514) DMRTB1 (ENSUPAG00010021527) ENSUPAG00010021531 LRP8 (ENSUPAG00010021536) MAGOH (ENSUPAG00010021633) CZIB (ENSUPAG00010021635) CPT2 (ENSUPAG00010021639) SLC1A7 (ENSUPAG00010021645) PODN (ENSUPAG00010021656) SCP2 (ENSUPAG00010021667) ECHDC2 (ENSUPAG00010021676) ZYG11A (ENSUPAG00010021681) ZYG11B (ENSUPAG00010021696) COA7 (ENSUPAG00010021697) SHISAL2A (ENSUPAG00010021700) ENSUPAG00010021701 #22 GPX7 (ENSUPAG00010021704) TUT4 (ENSUPAG00010021705) PRPF38A (ENSUPAG00010021729) ORC1 (ENSUPAG00010021734) CC2D1B (ENSUPAG00010021747) ZFYVE9 (ENSUPAG00010021759) ENSUPAG00010021795 BTF3L4 (ENSUPAG00010021796) TXNDC12 (ENSUPAG00010021798) RAB3B (ENSUPAG00010021800) NRDC (ENSUPAG00010021802) ENSUPAG00010021819 ENSUPAG00010022352 ##12 EPS15 (ENSUPAG00010022360) TTC39A (ENSUPAG00010022367) Laurasiatheria ANCESTRAL SPECIES 15 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b ##35 Eulipotyphla ANCESTRAL SPECIES 2356 ENSGT00390000010768 #20 ENSGT00940000155828 #22 Common shrew MODERN SPECIES 2142 PRDX2 (ENSSARG00000000146) #22 Hedgehog MODERN SPECIES 6270 RNASEH2A (ENSEEUG00000008222) #20 ENSEEUG00000008095 #22 Laurasiatheria_a ANCESTRAL SPECIES 19 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00390000016735 ENSGT00390000000053 Laurasiatheria_b ANCESTRAL SPECIES 18 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b.i ##35 Carnivora ANCESTRAL SPECIES 6 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Felidae ANCESTRAL SPECIES 21 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Cat MODERN SPECIES 1 TRMT1 (ENSFCAG00000000483) ENSFCAG00000000482 #7 NFIX (ENSFCAG00000000481) #8 DAND5 (ENSFCAG00000043469) #9 GADD45GIP1 (ENSFCAG00000034587) #10 RAD23A (ENSFCAG00000023315) #11 CALR (ENSFCAG00000000479) #12 FARSA (ENSFCAG00000023511) #13 GCDH (ENSFCAG00000000477) #15 KLF1 (ENSFCAG00000026066) #16 DNASE2 (ENSFCAG00000000476) #17 MAST1 (ENSFCAG00000000475) #18 RTBDN (ENSFCAG00000009941) #19 RNASEH2A (ENSFCAG00000000474) #20 THSD8 (ENSFCAG00000052414) #21 PRDX2 (ENSFCAG00000000473) #22 JUNB (ENSFCAG00000022803) #23 HOOK2 (ENSFCAG00000028846) #24 BEST2 (ENSFCAG00000000470) #25 GET3 (ENSFCAG00000000468) #26 TRIR (ENSFCAG00000032147) #27 TNPO2 (ENSFCAG00000000467) #28 FBXW9 (ENSFCAG00000000466) #29 GNG14 (ENSFCAG00000021887) DHPS (ENSFCAG00000000465) #31 WDR83 (ENSFCAG00000037204) #32 WDR83OS (ENSFCAG00000000463) #33 MAN2B1 (ENSFCAG00000029528) #34 ENSFCAG00000053819 ##35 ENSFCAG00000040256 ##35 ENSFCAG00000039394 ##35 Panthera ANCESTRAL SPECIES 15 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Tiger MODERN SPECIES 580 TRMT1 (ENSPTIG00000008833) NFIX (ENSPTIG00000009075) #8 DAND5 (ENSPTIG00000010336) #9 ENSPTIG00000010514 #10 RAD23A (ENSPTIG00000010565) #11 CALR (ENSPTIG00000011152) #12 FARSA (ENSPTIG00000011502) #13 SYCE2 (ENSPTIG00000011935) #14 GCDH (ENSPTIG00000012466) #15 ENSPTIG00000012710 #16 DNASE2 (ENSPTIG00000012774) #17 ENSPTIG00000012815 #18 RTBDN (ENSPTIG00000013220) #19 RNASEH2A (ENSPTIG00000013366) #20 THSD8 (ENSPTIG00000013637) #21 PRDX2 (ENSPTIG00000013677) #22 HOOK2 (ENSPTIG00000013806) #24 BEST2 (ENSPTIG00000014298) #25 GET3 (ENSPTIG00000014699) #26 Panthera_a ANCESTRAL SPECIES ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 lion MODERN SPECIES 2 LYL1 (ENSPLOG00000016418) #7 NFIX (ENSPLOG00000016031) #8 DAND5 (ENSPLOG00000015976) #9 GADD45GIP1 (ENSPLOG00000015943) #10 RAD23A (ENSPLOG00000015869) #11 CALR (ENSPLOG00000015775) #12 FARSA (ENSPLOG00000015558) #13 SYCE2 (ENSPLOG00000015466) #14 GCDH (ENSPLOG00000015264) #15 KLF1 (ENSPLOG00000015199) #16 DNASE2 (ENSPLOG00000015142) #17 MAST1 (ENSPLOG00000014769) #18 RTBDN (ENSPLOG00000014688) #19 RNASEH2A (ENSPLOG00000014659) #20 THSD8 (ENSPLOG00000014622) #21 PRDX2 (ENSPLOG00000014517) #22 JUNB (ENSPLOG00000014495) #23 HOOK2 (ENSPLOG00000014055) #24 BEST2 (ENSPLOG00000013919) #25 GET3 (ENSPLOG00000013778) #26 TRIR (ENSPLOG00000013712) #27 TNPO2 (ENSPLOG00000013652) #28 FBXW9 (ENSPLOG00000013556) #29 ENSPLOG00000013520 DHPS (ENSPLOG00000013447) #31 WDR83 (ENSPLOG00000013379) #32 WDR83OS (ENSPLOG00000013336) #33 MAN2B1 (ENSPLOG00000013282) #34 ENSPLOG00000013176 ##35 ENSPLOG00000013164 ##35 ENSPLOG00000013151 ##35 leopard DUPLICATION leopard MODERN SPECIES 47 ENSPPRG00000018692 ENSPPRG00000018969 KCNT2 (ENSPPRG00000018540) ENSPPRG00000017753 ENSPPRG00000017595 #22 ENSPPRG00000018952 CDC73 (ENSPPRG00000017525) B3GALT2 (ENSPPRG00000018936) GLRX2 (ENSPPRG00000017310) RO60 (ENSPPRG00000017233) UCHL5 (ENSPPRG00000016476) RGS2 (ENSPPRG00000015858) RGS13 (ENSPPRG00000015829) RGS1 (ENSPPRG00000015667) RGS21 (ENSPPRG00000015463) RGS18 (ENSPPRG00000015245) BRINP3 (ENSPPRG00000015190) ENSPPRG00000018908 ENSPPRG00000015159 KCTD3 (ENSPPRG00000014964) leopard MODERN SPECIES 110 LYL1 (ENSPPRG00000008858) #7 NFIX (ENSPPRG00000007036) #8 DAND5 (ENSPPRG00000002664) #9 GADD45GIP1 (ENSPPRG00000002575) #10 RAD23A (ENSPPRG00000002419) #11 CALR (ENSPPRG00000000511) #12 FARSA (ENSPPRG00000000346) #13 SYCE2 (ENSPPRG00000021729) #14 GCDH (ENSPPRG00000020586) #15 KLF1 (ENSPPRG00000016685) #16 DNASE2 (ENSPPRG00000015132) #17 MAST1 (ENSPPRG00000014214) #18 RTBDN (ENSPPRG00000013084) #19 THSD8 (ENSPPRG00000011424) #21 RNASEH2A (ENSPPRG00000010585) #20 PRDX2 (ENSPPRG00000010246) #22 JUNB (ENSPPRG00000020564) #23 ENSPPRG00000009177 HOOK2 (ENSPPRG00000009042) #24 BEST2 (ENSPPRG00000006013) #25 GET3 (ENSPPRG00000004506) #26 TRIR (ENSPPRG00000003329) #27 TNPO2 (ENSPPRG00000003075) #28 FBXW9 (ENSPPRG00000023858) #29 ENSPPRG00000020820 DHPS (ENSPPRG00000019899) #31 WDR83 (ENSPPRG00000014810) #32 WDR83OS (ENSPPRG00000014585) #33 MAN2B1 (ENSPPRG00000013970) #34 ENSPPRG00000011201 ##35 ENSPPRG00000010737 ##35 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Caniformia_b ANCESTRAL SPECIES 23 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195.d #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Mustelinae ANCESTRAL SPECIES 45 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195.d #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Ferret MODERN SPECIES 185 NACC1 (ENSMPUG00000004203) TRMT1 (ENSMPUG00000004210) LYL1 (ENSMPUG00000004316) #7 NFIX (ENSMPUG00000004325) #8 GADD45GIP1 (ENSMPUG00000004344) #10 RAD23A (ENSMPUG00000004334) #11 CALR (ENSMPUG00000004348) #12 FARSA (ENSMPUG00000004400) #13 GCDH (ENSMPUG00000004518) #15 ENSMPUG00000004535 #14 KLF1 (ENSMPUG00000004544) #16 DNASE2 (ENSMPUG00000004550) #17 MAST1 (ENSMPUG00000004565) #18 RTBDN (ENSMPUG00000004582) #19 RNASEH2A (ENSMPUG00000004586) #20 PRDX2 (ENSMPUG00000004591) #22 JUNB (ENSMPUG00000018708) #23 HOOK2 (ENSMPUG00000004624) #24 GET3 (ENSMPUG00000004639) #26 TRIR (ENSMPUG00000004652) #27 TNPO2 (ENSMPUG00000004663) #28 FBXW9 (ENSMPUG00000004689) #29 ENSMPUG00000004759 DHPS (ENSMPUG00000004768) #31 WDR83 (ENSMPUG00000004831) #32 WDR83OS (ENSMPUG00000004837) #33 MAN2B1 (ENSMPUG00000004856) #34 ENSMPUG00000004877 ##35 ENSMPUG00000004884 ##35 ENSMPUG00000004896 ##35 ENSMPUG00000004901 ##35 American mink MODERN SPECIES 233 TRMT1 (ENSNVIG00000004121) LYL1 (ENSNVIG00000004114) #7 NFIX (ENSNVIG00000004082) #8 DAND5 (ENSNVIG00000004073) #9 ENSNVIG00000004059 #10 RAD23A (ENSNVIG00000004028) #11 CALR (ENSNVIG00000004013) #12 FARSA (ENSNVIG00000003979) #13 SYCE2 (ENSNVIG00000003941) #14 GCDH (ENSNVIG00000003925) #15 KLF1 (ENSNVIG00000003918) #16 DNASE2 (ENSNVIG00000003902) #17 MAST1 (ENSNVIG00000003827) #18 RTBDN (ENSNVIG00000003814) #19 RNASEH2A (ENSNVIG00000003791) #20 PRDX2 (ENSNVIG00000003765) #22 JUNB (ENSNVIG00000003745) #23 HOOK2 (ENSNVIG00000003702) #24 BEST2 (ENSNVIG00000003651) #25 GET3 (ENSNVIG00000003624) #26 TRIR (ENSNVIG00000003597) #27 TNPO2 (ENSNVIG00000003442) #28 FBXW9 (ENSNVIG00000003405) #29 ENSNVIG00000003395 DHPS (ENSNVIG00000003322) #31 WDR83 (ENSNVIG00000003299) #32 WDR83OS (ENSNVIG00000003265) #33 MAN2B1 (ENSNVIG00000003244) #34 ENSNVIG00000003206 ##35 ENSNVIG00000003199 ##35 ENSNVIG00000003192 ##35 Ursidae ANCESTRAL SPECIES 20 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195.d #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Giant Panda MODERN SPECIES 14 LYL1 (ENSAMEG00000026522) #7 ENSAMEG00000027765 ENSAMEG00000012569 #8 DAND5 (ENSAMEG00000012568) #9 GADD45GIP1 (ENSAMEG00000012565) #10 RAD23A (ENSAMEG00000012527) #11 ENSAMEG00000012487 #12 FARSA (ENSAMEG00000012446) #13 SYCE2 (ENSAMEG00000012442) #14 GCDH (ENSAMEG00000012411) #15 KLF1 (ENSAMEG00000027076) #16 DNASE2 (ENSAMEG00000012396) #17 MAST1 (ENSAMEG00000012351) #18 RTBDN (ENSAMEG00000012347) #19 RNASEH2A (ENSAMEG00000028673) #20 PRDX2 (ENSAMEG00000012307) #22 JUNB (ENSAMEG00000012298) #23 HOOK2 (ENSAMEG00000012234) #24 BEST2 (ENSAMEG00000012212) #25 GET3 (ENSAMEG00000012198) #26 TRIR (ENSAMEG00000012192) #27 TNPO2 (ENSAMEG00000012123) #28 FBXW9 (ENSAMEG00000012106) #29 ENSAMEG00000012105 DHPS (ENSAMEG00000012097) #31 WDR83 (ENSAMEG00000012090) #32 WDR83OS (ENSAMEG00000024064) #33 MAN2B1 (ENSAMEG00000012013) #34 ENSAMEG00000025321 ##35 ENSAMEG00000012006 ##35 ENSAMEG00000011689 ##35 Ursus ANCESTRAL SPECIES 91 ENSGT00940000159327 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195.c #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 American black bear DUPLICATION American black bear MODERN SPECIES 990 ENSUAMG00000027848 #22 American black bear MODERN SPECIES 1490 RNASEH2A (ENSUAMG00000019593) #20 PRDX2 (ENSUAMG00000019605) #22 ENSUAMG00000019609 #23 HOOK2 (ENSUAMG00000019611) #24 BEST2 (ENSUAMG00000019615) #25 GET3 (ENSUAMG00000019617) #26 TRIR (ENSUAMG00000019618) #27 TNPO2 (ENSUAMG00000019621) #28 FBXW9 (ENSUAMG00000019625) #29 ENSUAMG00000019626 DHPS (ENSUAMG00000019627) #31 WDR83 (ENSUAMG00000019628) #32 WDR83OS (ENSUAMG00000019649) #33 MAN2B1 (ENSUAMG00000019650) #34 ENSUAMG00000019652 #35 Polar bear DUPLICATION Polar bear MODERN SPECIES 126 ENSUMAG00000020443 #22 CDC73 (ENSUMAG00000020453) B3GALT2 (ENSUMAG00000020459) GLRX2 (ENSUMAG00000020462) RO60 (ENSUMAG00000020464) UCHL5 (ENSUMAG00000020466) RGS2 (ENSUMAG00000020471) RGS13 (ENSUMAG00000020472) RGS1 (ENSUMAG00000020474) RGS21 (ENSUMAG00000020475) RGS18 (ENSUMAG00000020481) ENSUMAG00000020488 ENSUMAG00000020493 BRINP3 (ENSUMAG00000020497) ENSUMAG00000020507 KCTD3 (ENSUMAG00000020509) Polar bear MODERN SPECIES 464 ENSUMAG00000006026 TRMT1 (ENSUMAG00000006027) LYL1 (ENSUMAG00000006035) #7 NFIX (ENSUMAG00000006053) #8 DAND5 (ENSUMAG00000006065) #9 ENSUMAG00000006067 #10 RAD23A (ENSUMAG00000006070) #11 CALR (ENSUMAG00000006097) #12 FARSA (ENSUMAG00000006110) #13 SYCE2 (ENSUMAG00000006118) #14 GCDH (ENSUMAG00000006134) #15 DNASE2 (ENSUMAG00000006143) #17 MAST1 (ENSUMAG00000006156) #18 RTBDN (ENSUMAG00000006251) #19 ENSUMAG00000006254 #20 PRDX2 (ENSUMAG00000006260) #22 HOOK2 (ENSUMAG00000006279) #24 ENSUMAG00000006424 #25 GET3 (ENSUMAG00000006429) #26 ENSUMAG00000006440 #27 TNPO2 (ENSUMAG00000006504) #28 FBXW9 (ENSUMAG00000007019) #29 DHPS (ENSUMAG00000007032) #31 WDR83 (ENSUMAG00000007054) #32 WDR83OS (ENSUMAG00000007153) #33 MAN2B1 (ENSUMAG00000007247) #34 ENSUMAG00000007577 ##35 Canidae ANCESTRAL SPECIES ENSGT00940000162404.b #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00960000189551 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Red fox MODERN SPECIES 182 LYL1 (ENSVVUG00000024174) #7 ENSVVUG00000024173 NFIX (ENSVVUG00000024169) #8 DAND5 (ENSVVUG00000024168) #9 GADD45GIP1 (ENSVVUG00000024166) #10 RAD23A (ENSVVUG00000024155) #11 CALR (ENSVVUG00000024147) #12 FARSA (ENSVVUG00000024145) #13 ENSVVUG00000024144 #14 GCDH (ENSVVUG00000024143) #15 KLF1 (ENSVVUG00000024142) #16 DNASE2 (ENSVVUG00000024141) #17 MAST1 (ENSVVUG00000024135) #18 RTBDN (ENSVVUG00000024134) #19 ENSVVUG00000024133 PRDX2 (ENSVVUG00000024132) #22 JUNB (ENSVVUG00000024130) #23 HOOK2 (ENSVVUG00000024128) #24 BEST2 (ENSVVUG00000024122) #25 ASNA1 (ENSVVUG00000024118) #26 TRIR (ENSVVUG00000024113) #27 TNPO2 (ENSVVUG00000023860) #28 FBXW9 (ENSVVUG00000023840) #29 GNG14 (ENSVVUG00000023838) DHPS (ENSVVUG00000023833) #31 WDR83 (ENSVVUG00000023830) #32 WDR83OS (ENSVVUG00000023828) #33 MAN2B1 (ENSVVUG00000023820) #34 ENSVVUG00000023819 ##35 ENSVVUG00000023817 ##35 ENSVVUG00000023816 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00530000063646.b ENSGT00940000162404.b #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##35 ENSGT00950000182755.b.a.a.a.a.b ##35 Dog MODERN SPECIES 12 TRMT1 (ENSCAFG00845030492) ENSCAFG00845030516 #7 NFIX (ENSCAFG00845030565) #8 DAND5 (ENSCAFG00845015107) #9 GADD45GIP1 (ENSCAFG00845015125) #10 RAD23A (ENSCAFG00845015161) #11 CALR (ENSCAFG00845015220) #12 FARSA (ENSCAFG00845015291) #13 SYCE2 (ENSCAFG00845015391) #14 GCDH (ENSCAFG00845015478) #15 KLF1 (ENSCAFG00845015569) #16 DNASE2 (ENSCAFG00845015604) #17 MAST1 (ENSCAFG00845015670) #18 RTBDN (ENSCAFG00845015774) #19 RNASEH2A (ENSCAFG00845015846) #20 PRDX2 (ENSCAFG00845015946) #22 JUNB (ENSCAFG00845015989) #23 HOOK2 (ENSCAFG00845016033) #24 BEST2 (ENSCAFG00845016163) #25 GET3 (ENSCAFG00845016222) #26 TRIR (ENSCAFG00845016276) #27 TNPO2 (ENSCAFG00845016346) #28 FBXW9 (ENSCAFG00845016738) #29 GNG14 (ENSCAFG00845016787) DHPS (ENSCAFG00845016832) #31 WDR83 (ENSCAFG00845016879) #32 WDR83OS (ENSCAFG00845016928) #33 ENSCAFG00845017174 #34 ENSCAFG00845017657 ##35 ENSCAFG00845017723 ##35 ENSCAFG00845017811 Dingo MODERN SPECIES 112 TRMT1 (ENSCAFG00020005397) LYL1 (ENSCAFG00020005371) #7 NFIX (ENSCAFG00020005352) #8 DAND5 (ENSCAFG00020005339) #9 GADD45GIP1 (ENSCAFG00020005337) #10 RAD23A (ENSCAFG00020005332) #11 CALR (ENSCAFG00020005320) #12 FARSA (ENSCAFG00020005315) #13 ENSCAFG00020005308 #14 GCDH (ENSCAFG00020005305) #15 KLF1 (ENSCAFG00020005300) #16 DNASE2 (ENSCAFG00020005295) #17 MAST1 (ENSCAFG00020005207) #18 RTBDN (ENSCAFG00020005198) #19 RNASEH2A (ENSCAFG00020005190) #20 PRDX2 (ENSCAFG00020005178) #22 JUNB (ENSCAFG00020005176) #23 HOOK2 (ENSCAFG00020005171) #24 BEST2 (ENSCAFG00020005167) #25 GET3 (ENSCAFG00020005145) #26 TRIR (ENSCAFG00020005142) #27 TNPO2 (ENSCAFG00020005115) #28 FBXW9 (ENSCAFG00020005110) #29 ENSCAFG00020005105 DHPS (ENSCAFG00020005102) #31 WDR83 (ENSCAFG00020005098) #32 WDR83OS (ENSCAFG00020005096) #33 MAN2B1 (ENSCAFG00020005086) #34 ENSCAFG00020005083 ##35 ENSCAFG00020005082 ##35 ENSCAFG00020005065 ##35 Laurasiatheria_c ANCESTRAL SPECIES 16 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00940000163881 ENSGT00950000183216.d.a.a.b.b Chiroptera ANCESTRAL SPECIES 60 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 Megabat MODERN SPECIES 292 GADD45GIP1 (ENSPVAG00000014719) #10 RAD23A (ENSPVAG00000014717) #11 CALR (ENSPVAG00000014715) #12 FARSA (ENSPVAG00000014714) #13 SYCE2 (ENSPVAG00000014713) #14 GCDH (ENSPVAG00000014712) #15 KLF1 (ENSPVAG00000014711) #16 DNASE2 (ENSPVAG00000014710) #17 MAST1 (ENSPVAG00000014707) #18 RTBDN (ENSPVAG00000014705) #19 RNASEH2A (ENSPVAG00000014703) #20 PRDX2 (ENSPVAG00000014702) #22 ENSPVAG00000014700 #24 BEST2 (ENSPVAG00000014699) #25 GET3 (ENSPVAG00000014698) #26 TRIR (ENSPVAG00000014697) #27 Microchiroptera ANCESTRAL SPECIES 51 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 Microbat MODERN SPECIES 1559 NACC1 (ENSMLUG00000003937) TRMT1 (ENSMLUG00000012809) LYL1 (ENSMLUG00000012805) #7 NFIX (ENSMLUG00000012794) #8 GADD45GIP1 (ENSMLUG00000012790) #10 RAD23A (ENSMLUG00000012783) #11 ENSMLUG00000012776 FARSA (ENSMLUG00000012767) #13 SYCE2 (ENSMLUG00000004284) #14 GCDH (ENSMLUG00000012753) #15 KLF1 (ENSMLUG00000012751) #16 DNASE2 (ENSMLUG00000023519) #17 MAST1 (ENSMLUG00000012736) #18 RTBDN (ENSMLUG00000012729) #19 RNASEH2A (ENSMLUG00000012723) #20 PRDX2 (ENSMLUG00000012718) #22 JUNB (ENSMLUG00000012714) #23 HOOK2 (ENSMLUG00000012699) #24 BEST2 (ENSMLUG00000029360) #25 GET3 (ENSMLUG00000012694) #26 TRIR (ENSMLUG00000012689) #27 TNPO2 (ENSMLUG00000012669) #28 FBXW9 (ENSMLUG00000012655) #29 ENSMLUG00000024606 DHPS (ENSMLUG00000012647) #31 WDR83 (ENSMLUG00000012637) #32 WDR83OS (ENSMLUG00000012633) #33 Greater horseshoe bat MODERN SPECIES 9 ENSRFEG00010021172 DAND5 (ENSRFEG00010021178) #9 GADD45GIP1 (ENSRFEG00010021188) #10 RAD23A (ENSRFEG00010021198) #11 CALR (ENSRFEG00010021212) #12 FARSA (ENSRFEG00010021230) #13 SYCE2 (ENSRFEG00010021245) #14 GCDH (ENSRFEG00010021270) #15 KLF1 (ENSRFEG00010021300) #16 DNASE2 (ENSRFEG00010021305) #17 MAST1 (ENSRFEG00010021327) #18 RTBDN (ENSRFEG00010021362) #19 ENSRFEG00010021370 RNASEH2A (ENSRFEG00010021379) #20 THSD8 (ENSRFEG00010021389) #21 PRDX2 (ENSRFEG00010021398) #22 JUNB (ENSRFEG00010021403) #23 HOOK2 (ENSRFEG00010021413) #24 BEST2 (ENSRFEG00010021431) #25 GET3 (ENSRFEG00010021439) #26 TRIR (ENSRFEG00010021446) #27 TNPO2 (ENSRFEG00010021459) #28 FBXW9 (ENSRFEG00010021482) #29 ENSRFEG00010021496 DHPS (ENSRFEG00010021515) #31 WDR83 (ENSRFEG00010021533) #32 WDR83OS (ENSRFEG00010021544) #33 MAN2B1 (ENSRFEG00010021563) #34 ENSRFEG00010021582 ##35 ENSRFEG00010021592 ##35 ENSRFEG00010021596 Equus ANCESTRAL SPECIES 55 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00950000185200 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.a.a.a.a.b.b ##35 Horse MODERN SPECIES 28 NFIX (ENSECAG00000019690) #8 ENSECAG00000031092 GADD45GIP1 (ENSECAG00000003766) #10 DAND5 (ENSECAG00000024508) #9 RAD23A (ENSECAG00000024607) #11 CALR (ENSECAG00000008164) FARSA (ENSECAG00000015139) #13 SYCE2 (ENSECAG00000052051) #14 GCDH (ENSECAG00000012495) #15 KLF1 (ENSECAG00000027715) #16 DNASE2 (ENSECAG00000018970) #17 MAST1 (ENSECAG00000022473) #18 RTBDN (ENSECAG00000001223) #19 RNASEH2A (ENSECAG00000007013) #20 JUNB (ENSECAG00000003816) #23 PRDX2 (ENSECAG00000011541) #22 HOOK2 (ENSECAG00000014343) #24 BEST2 (ENSECAG00000038067) #25 GET3 (ENSECAG00000007103) #26 TRIR (ENSECAG00000012154) #27 TNPO2 (ENSECAG00000013673) #28 FBXW9 (ENSECAG00000005017) #29 GNG14 (ENSECAG00000008886) DHPS (ENSECAG00000009177) #31 WDR83 (ENSECAG00000019788) #32 WDR83OS (ENSECAG00000058865) #33 MAN2B1 (ENSECAG00000022546) #34 ENSECAG00000034536 ##35 ENSECAG00000045532 ENSECAG00000058983 #35 ENSECAG00000049508 ##35 Donkey MODERN SPECIES 12 NFIX (ENSEASG00005004061) #8 ENSEASG00005028746 DAND5 (ENSEASG00005004075) #9 GADD45GIP1 (ENSEASG00005035955) #10 RAD23A (ENSEASG00005004081) #11 CALR (ENSEASG00005004089) #12 FARSA (ENSEASG00005004093) #13 ENSEASG00005034575 #14 GCDH (ENSEASG00005004102) #15 KLF1 (ENSEASG00005004104) #16 DNASE2 (ENSEASG00005004105) #17 MAST1 (ENSEASG00005004109) #18 RTBDN (ENSEASG00005004115) #19 RNASEH2A (ENSEASG00005004118) #20 JUNB (ENSEASG00005032517) #23 PRDX2 (ENSEASG00005004125) #22 HOOK2 (ENSEASG00005004135) #24 BEST2 (ENSEASG00005004149) #25 GET3 (ENSEASG00005004153) #26 TRIR (ENSEASG00005004158) #27 TNPO2 (ENSEASG00005004160) #28 FBXW9 (ENSEASG00005004179) #29 ENSEASG00005024096 DHPS (ENSEASG00005004189) #31 WDR83 (ENSEASG00005004195) #32 WDR83OS (ENSEASG00005036170) #33 ENSEASG00005004211 #34 ENSEASG00005031648 ##35 ENSEASG00005036541 ##35 ENSEASG00005029679 #35 ENSEASG00005025019 ##35 Artiodactyla ANCESTRAL SPECIES 22 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00440000039287 ENSGT00940000163044 Suina ANCESTRAL SPECIES 16 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b #35 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b.i ##35 Pig DUPLICATION Pig MODERN SPECIES ENSSSCG00000057761 ENSSSCG00000031194 TBX18 (ENSSSCG00000004290) CEP162 (ENSSSCG00000004289) MRAP2 (ENSSSCG00000026943) CYB5R4 (ENSSSCG00000022994) ENSSSCG00000004287 OOEP (ENSSSCG00000004285) ENSSSCG00000058051 DPPA5 (ENSSSCG00000004283) ENSSSCG00000053554 ENSSSCG00000046325 KCNQ5 (ENSSSCG00000004281) RIMS1 (ENSSSCG00000004280) OGFRL1 (ENSSSCG00000004279) ENSSSCG00000058784 #22 B3GAT2 (ENSSSCG00000026246) SMAP1 (ENSSSCG00000004276) SDHAF4 (ENSSSCG00000051834) FAM135A (ENSSSCG00000004275) COL9A1 (ENSSSCG00000004274) COL19A1 (ENSSSCG00000044472) ENSSSCG00000061940 LMBRD1 (ENSSSCG00000004272) ADGRB3 (ENSSSCG00000004270) ENSSSCG00000004269 PHF3 (ENSSSCG00000035259) PTP4A1 (ENSSSCG00000025941) ENSSSCG00000032533 RSPH4A (ENSSSCG00000023834) ZUP1 (ENSSSCG00000004263) Pig MODERN SPECIES 10 TRMT1 (ENSSSCG00000013744) LYL1 (ENSSSCG00000024549) #7 NFIX (ENSSSCG00000013742) #8 ENSSSCG00000048273 RAD23A (ENSSSCG00000013747) #11 GADD45GIP1 (ENSSSCG00000034859) #10 CALR (ENSSSCG00000013746) #12 FARSA (ENSSSCG00000013745) #13 SYCE2 (ENSSSCG00000013740) #14 GCDH (ENSSSCG00000013729) #15 KLF1 (ENSSSCG00000013730) #16 DNASE2 (ENSSSCG00000013731) #17 MAST1 (ENSSSCG00000013732) #18 RTBDN (ENSSSCG00000033304) #19 RNASEH2A (ENSSSCG00000013737) #20 PRDX2 (ENSSSCG00000013736) #22 JUNB (ENSSSCG00000013735) #23 HOOK2 (ENSSSCG00000013734) #24 BEST2 (ENSSSCG00000013733) #25 GET3 (ENSSSCG00000038776) #26 TRIR (ENSSSCG00000013727) #27 TNPO2 (ENSSSCG00000013726) #28 FBXW9 (ENSSSCG00000013725) #29 ENSSSCG00000052605 DHPS (ENSSSCG00000013723) #31 WDR83 (ENSSSCG00000013722) #32 WDR83OS (ENSSSCG00000013721) #33 MAN2B1 (ENSSSCG00000013720) #34 ENSSSCG00000029347 ##35 ENSSSCG00000046939 ENSSSCG00000033388 ##35 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 59 SYNCRIP (ENSCWAG00000010209) SNX14 (ENSCWAG00000009680) NT5E (ENSCWAG00000009378) TBX18 (ENSCWAG00000009292) CEP162 (ENSCWAG00000009113) MRAP2 (ENSCWAG00000009069) CYB5R4 (ENSCWAG00000008870) DDX43 (ENSCWAG00000008720) ENSCWAG00000008652 DPPA5 (ENSCWAG00000008587) ENSCWAG00000008542 KCNQ5 (ENSCWAG00000006051) ENSCWAG00000005944 RIMS1 (ENSCWAG00000001044) OGFRL1 (ENSCWAG00000000668) ENSCWAG00000000657 #22 B3GAT2 (ENSCWAG00000000640) SMAP1 (ENSCWAG00000000558) SDHAF4 (ENSCWAG00000000537) FAM135A (ENSCWAG00000000436) COL9A1 (ENSCWAG00000000201) COL19A1 (ENSCWAG00000000048) LMBRD1 (ENSCWAG00000008700) ADGRB3 (ENSCWAG00000008282) ENSCWAG00000008197 Chacoan peccary MODERN SPECIES 769 TRMT1 (ENSCWAG00000001026) LYL1 (ENSCWAG00000001006) #7 NFIX (ENSCWAG00000000950) #8 GADD45GIP1 (ENSCWAG00000000909) #10 RAD23A (ENSCWAG00000000887) #11 CALR (ENSCWAG00000000858) #12 FARSA (ENSCWAG00000000829) #13 SYCE2 (ENSCWAG00000000797) #14 GCDH (ENSCWAG00000000760) #15 KLF1 (ENSCWAG00000000736) #16 DNASE2 (ENSCWAG00000000717) #17 MAST1 (ENSCWAG00000000559) #18 RTBDN (ENSCWAG00000000515) #19 RNASEH2A (ENSCWAG00000000486) #20 THSD8 (ENSCWAG00000000470) #21 ENSCWAG00000000453 #22 JUNB (ENSCWAG00000000438) #23 Artiodactyla_a ANCESTRAL SPECIES 23 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00440000039287 ENSGT00940000163044 Camelidae ANCESTRAL SPECIES 69 ENSGT00940000159327 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00440000039287 ENSGT00940000163044 Arabian camel MODERN SPECIES 14 TRMT1 (ENSCDRG00005022165) LYL1 (ENSCDRG00005022168) #7 NFIX (ENSCDRG00005022174) #8 ENSCDRG00005022176 GADD45GIP1 (ENSCDRG00005022178) #10 RAD23A (ENSCDRG00005022180) #11 CALR (ENSCDRG00005022183) #12 FARSA (ENSCDRG00005022184) #13 GCDH (ENSCDRG00005022187) #15 KLF1 (ENSCDRG00005022188) #16 DNASE2 (ENSCDRG00005022189) #17 MAST1 (ENSCDRG00005022190) #18 RTBDN (ENSCDRG00005022192) #19 RNASEH2A (ENSCDRG00005022193) #20 THSD8 (ENSCDRG00005022194) #21 PRDX2 (ENSCDRG00005022195) #22 JUNB (ENSCDRG00005022198) #23 HOOK2 (ENSCDRG00005022199) #24 BEST2 (ENSCDRG00005022200) #25 ASNA1 (ENSCDRG00005022202) #26 TRIR (ENSCDRG00005022203) #27 TNPO2 (ENSCDRG00005022205) #28 FBXW9 (ENSCDRG00005022210) #29 ENSCDRG00005022213 DHPS (ENSCDRG00005022217) #31 WDR83 (ENSCDRG00005022223) #32 WDR83OS (ENSCDRG00005022225) #33 MAN2B1 (ENSCDRG00005022226) #34 ENSCDRG00005022228 ##35 ENSCDRG00005022231 ##35 ENSCDRG00005022234 ##35 Alpaca MODERN SPECIES 1784 ENSVPAG00000003260 #22 Artiodactyla_b ANCESTRAL SPECIES 23 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##35 ENSGT00440000039287 Pecora ANCESTRAL SPECIES ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##35 ENSGT00440000039287 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 28 ENSCHYG00000003891 ENSCHYG00000003881 ELF2 (ENSCHYG00000003820) NOCT (ENSCHYG00000003790) ENSCHYG00000003782 ENSCHYG00000003775 SLC7A11 (ENSCHYG00000003749) ENSCHYG00000003723 PCDH18 (ENSCHYG00000003685) ENSCHYG00000003660 ENSCHYG00000003650 ENSCHYG00000003641 PABPC4L (ENSCHYG00000003623) ENSCHYG00000003606 PCDH10 (ENSCHYG00000003589) ENSCHYG00000003572 #22 ENSCHYG00000003561 C4orf33 (ENSCHYG00000003546) SCLT1 (ENSCHYG00000003454) JADE1 (ENSCHYG00000003379) PGRMC2 (ENSCHYG00000003351) ENSCHYG00000003328 ENSCHYG00000003312 LARP1B (ENSCHYG00000003154) ENSCHYG00000003101 ABHD18 (ENSCHYG00000003039) MFSD8 (ENSCHYG00000002571) PLK4 (ENSCHYG00000002235) HSPA4L (ENSCHYG00000002146) INTU (ENSCHYG00000001993) FAT4 (ENSCHYG00000001903) Yarkand deer MODERN SPECIES 1323 NEXMIF (ENSCHYG00000013048) ENSCHYG00000013033 ABCB7 (ENSCHYG00000012079) UPRT (ENSCHYG00000011786) ZDHHC15 (ENSCHYG00000011470) MAGEE2 (ENSCHYG00000011410) ENSCHYG00000011362 ENSCHYG00000011310 FGF16 (ENSCHYG00000011260) ENSCHYG00000011219 ATRX (ENSCHYG00000011090) MAGT1 (ENSCHYG00000010961) ENSCHYG00000010895 ATP7A (ENSCHYG00000010379) ENSCHYG00000010341 ENSCHYG00000010325 #22 ENSCHYG00000010187 TAF9B (ENSCHYG00000010082) ENSCHYG00000009821 CYSLTR1 (ENSCHYG00000009807) LPAR4 (ENSCHYG00000009794) P2RY10 (ENSCHYG00000009753) GPR174 (ENSCHYG00000009735) ITM2A (ENSCHYG00000009688) TBX22 (ENSCHYG00000009606) ENSCHYG00000009550 TENT5D (ENSCHYG00000009524) ENSCHYG00000009482 ENSCHYG00000009463 BRWD3 (ENSCHYG00000008984) ENSCHYG00000008921 Yarkand deer MODERN SPECIES 32 STX10 (ENSCHYG00000015356) NACC1 (ENSCHYG00000015883) TRMT1 (ENSCHYG00000016033) LYL1 (ENSCHYG00000016421) #7 NFIX (ENSCHYG00000016512) #8 GADD45GIP1 (ENSCHYG00000017788) #10 ENSCHYG00000017855 #12 FARSA (ENSCHYG00000018361) #13 GCDH (ENSCHYG00000018661) #15 KLF1 (ENSCHYG00000019002) #16 DNASE2 (ENSCHYG00000019086) #17 MAST1 (ENSCHYG00000019171) #18 ENSCHYG00000019426 RTBDN (ENSCHYG00000019447) #19 RNASEH2A (ENSCHYG00000019565) #20 ENSCHYG00000019679 #22 JUNB (ENSCHYG00000019794) #23 HOOK2 (ENSCHYG00000019849) #24 BEST2 (ENSCHYG00000020079) #25 ENSCHYG00000020173 #26 TRIR (ENSCHYG00000020314) #27 TNPO2 (ENSCHYG00000020399) #28 FBXW9 (ENSCHYG00000020520) #29 ENSCHYG00000020822 DHPS (ENSCHYG00000020871) #31 WDR83 (ENSCHYG00000021020) #32 ENSCHYG00000021159 #33 MAN2B1 (ENSCHYG00000021233) #34 ENSCHYG00000021342 ENSCHYG00000021396 ##35 ENSCHYG00000021432 Percora_a ANCESTRAL SPECIES ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##35 ENSGT00440000039287 Bovidae ANCESTRAL SPECIES ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b ##35 ENSGT00440000039287 Bovinae ANCESTRAL SPECIES 2 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b ##35 ENSGT00440000039287 American bison MODERN SPECIES 3279 TRMT1 (ENSBBBG00000019284) LYL1 (ENSBBBG00000019215) #7 NFIX (ENSBBBG00000019204) #8 ENSBBBG00000008167 #10 RAD23A (ENSBBBG00000019119) #11 CALR (ENSBBBG00000004880) #12 FARSA (ENSBBBG00000019049) #13 SYCE2 (ENSBBBG00000004849) #14 GCDH (ENSBBBG00000004838) #15 KLF1 (ENSBBBG00000004825) #16 DNASE2 (ENSBBBG00000018969) #17 MAST1 (ENSBBBG00000018956) #18 RTBDN (ENSBBBG00000018793) #19 RNASEH2A (ENSBBBG00000018775) #20 THSD8 (ENSBBBG00000018770) #21 PRDX2 (ENSBBBG00000008767) #22 HOOK2 (ENSBBBG00000009147) #24 BEST2 (ENSBBBG00000018649) #25 GET3 (ENSBBBG00000004626) #26 ENSBBBG00000018618 TNPO2 (ENSBBBG00000018607) #28 FBXW9 (ENSBBBG00000018508) #29 ENSBBBG00000018499 DHPS (ENSBBBG00000004547) #31 WDR83 (ENSBBBG00000018478) #32 WDR83OS (ENSBBBG00000004534) #33 MAN2B1 (ENSBBBG00000018459) #34 ENSBBBG00000018419 ##35 ENSBBBG00000018415 ##35 ENSBBBG00000018390 ENSBBBG00000018386 ##35 Bos ANCESTRAL SPECIES 3 ENSGT00530000063646.b.r ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.b ##35 ENSGT00440000039287 Bos_b ANCESTRAL SPECIES 2 ENSGT00940000159327 ENSGT00530000063646.b.r ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.b ##35 ENSGT00440000039287 Cow MODERN SPECIES 26 NACC1 (ENSBTAG00000016350) TRMT1 (ENSBTAG00000019325) LYL1 (ENSBTAG00000019329) #7 NFIX (ENSBTAG00000018229) #8 GADD45GIP1 (ENSBTAG00000015117) #10 RAD23A (ENSBTAG00000015116) #11 CALR (ENSBTAG00000015114) #12 FARSA (ENSBTAG00000021374) #13 SYCE2 (ENSBTAG00000016213) #14 GCDH (ENSBTAG00000016211) #15 KLF1 (ENSBTAG00000006083) #16 DNASE2 (ENSBTAG00000006082) #17 MAST1 (ENSBTAG00000006080) #18 RTBDN (ENSBTAG00000006077) #19 RNASEH2A (ENSBTAG00000009661) #20 PRDX2 (ENSBTAG00000012062) #22 JUNB (ENSBTAG00000012046) #23 HOOK2 (ENSBTAG00000008654) #24 BEST2 (ENSBTAG00000025652) #25 GET3 (ENSBTAG00000011837) #26 TRIR (ENSBTAG00000011825) #27 TNPO2 (ENSBTAG00000011811) #28 FBXW9 (ENSBTAG00000020924) #29 GNG14 (ENSBTAG00000006251) DHPS (ENSBTAG00000006247) #31 WDR83 (ENSBTAG00000006245) #32 WDR83OS (ENSBTAG00000006244) #33 MAN2B1 (ENSBTAG00000006241) #34 ENSBTAG00000016721 ##35 ENSBTAG00000049339 ##35 ENSBTAG00000055295 Hybrid Bos Indicus MODERN SPECIES 26 TRMT1 (ENSBIXG00005022272) LYL1 (ENSBIXG00005003796) #7 NACC1 (ENSBIXG00005003906) GADD45GIP1 (ENSBIXG00005022995) #10 RAD23A (ENSBIXG00005023035) #11 CALR (ENSBIXG00005023092) #12 FARSA (ENSBIXG00005023164) #13 ENSBIXG00005023188 #14 GCDH (ENSBIXG00005006673) #15 KLF1 (ENSBIXG00005006052) #16 DNASE2 (ENSBIXG00005023267) #17 MAST1 (ENSBIXG00005023334) #18 RTBDN (ENSBIXG00005007174) #19 RNASEH2A (ENSBIXG00005023406) #20 JUNB (ENSBIXG00005023431) #23 PRDX2 (ENSBIXG00005004022) #22 HOOK2 (ENSBIXG00005023624) #24 BEST2 (ENSBIXG00005004058) #25 GET3 (ENSBIXG00005023763) #26 TNPO2 (ENSBIXG00005024052) #28 ENSBIXG00005024114 FBXW9 (ENSBIXG00005024191) #29 DHPS (ENSBIXG00005024243) #31 WDR83 (ENSBIXG00005004147) #32 WDR83OS (ENSBIXG00005024294) #33 MAN2B1 (ENSBIXG00005024343) #34 ENSBIXG00005024372 ##35 ENSBIXG00005004163 ENSBIXG00005024398 ##35 ENSBIXG00005004175 ENSBIXG00005024470 Bos_a ANCESTRAL SPECIES 57 ENSGT00530000063646.b.r ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.b.b.a ##35 ENSGT00950000182755.b.a.b ##35 ENSGT00440000039287 Wild yak MODERN SPECIES 1191 TRMT1 (ENSBMUG00000015157) LYL1 (ENSBMUG00000015125) #7 NFIX (ENSBMUG00000015081) #8 GADD45GIP1 (ENSBMUG00000015011) #10 RAD23A (ENSBMUG00000014991) #11 CALR (ENSBMUG00000014947) #12 FARSA (ENSBMUG00000014925) #13 SYCE2 (ENSBMUG00000014874) #14 GCDH (ENSBMUG00000014853) #15 KLF1 (ENSBMUG00000014835) #16 DNASE2 (ENSBMUG00000014821) #17 MAST1 (ENSBMUG00000014789) #18 RTBDN (ENSBMUG00000014745) #19 RNASEH2A (ENSBMUG00000014723) #20 THSD8 (ENSBMUG00000014710) #21 PRDX2 (ENSBMUG00000014704) #22 HOOK2 (ENSBMUG00000014550) #24 BEST2 (ENSBMUG00000014141) #25 ASNA1 (ENSBMUG00000014104) #26 TRIR (ENSBMUG00000014082) #27 TNPO2 (ENSBMUG00000013142) #28 FBXW9 (ENSBMUG00000012328) #29 ENSBMUG00000012320 DHPS (ENSBMUG00000012304) #31 WDR83 (ENSBMUG00000012287) #32 WDR83OS (ENSBMUG00000012262) #33 MAN2B1 (ENSBMUG00000012248) #34 ENSBMUG00000012228 ##35 ENSBMUG00000012181 ##35 ENSBMUG00000012138 ENSBMUG00000012125 Domestic yak MODERN SPECIES 27 TRMT1 (ENSBGRG00000008629) LYL1 (ENSBGRG00000008585) #7 NFIX (ENSBGRG00000007656) #8 GADD45GIP1 (ENSBGRG00000007568) #10 RAD23A (ENSBGRG00000007230) #11 CALR (ENSBGRG00000007159) #12 FARSA (ENSBGRG00000006949) #13 SYCE2 (ENSBGRG00000006880) #14 GCDH (ENSBGRG00000006775) #15 KLF1 (ENSBGRG00000006745) #16 DNASE2 (ENSBGRG00000006722) #17 MAST1 (ENSBGRG00000006558) #18 RTBDN (ENSBGRG00000006406) #19 RNASEH2A (ENSBGRG00000006330) #20 THSD8 (ENSBGRG00000006299) #21 PRDX2 (ENSBGRG00000006234) #22 JUNB (ENSBGRG00000006220) #23 HOOK2 (ENSBGRG00000005838) #24 BEST2 (ENSBGRG00000005756) #25 GET3 (ENSBGRG00000005656) #26 TRIR (ENSBGRG00000005621) #27 TNPO2 (ENSBGRG00000005497) #28 FBXW9 (ENSBGRG00000005389) #29 ENSBGRG00000005368 DHPS (ENSBGRG00000005293) #31 WDR83 (ENSBGRG00000005260) #32 WDR83OS (ENSBGRG00000005213) #33 MAN2B1 (ENSBGRG00000005041) #34 ENSBGRG00000005014 ENSBGRG00000004914 ##35 ENSBGRG00000004802 Caprinae ANCESTRAL SPECIES 3 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00940000156532.l ENSGT00950000182755.b.a.a.a.a.a.a.b.j ##35 ENSGT00950000182755.b.a.a.a.a.a.a.b.i ##35 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 2 ACACA (ENSOARG00020023744) ENSOARG00020024324 AATF (ENSOARG00020024358) ENSOARG00020024441 LHX1 (ENSOARG00020024449) MRM1 (ENSOARG00020024467) GGNBP2 (ENSOARG00020024497) PIGW (ENSOARG00020024630) MYO19 (ENSOARG00020024654) ZNHIT3 (ENSOARG00020024765) CA4 (ENSOARG00020024778) ENSOARG00020024810 ENSOARG00020024981 CHCT1 (ENSOARG00020009988) APPBP2 (ENSOARG00020010094) ENSOARG00020010189 #22 PPM1D (ENSOARG00020010254) BCAS3 (ENSOARG00020010530) TBX2 (ENSOARG00020011127) TBX4 (ENSOARG00020011171) ENSOARG00020011344 BRIP1 (ENSOARG00020011382) ENSOARG00020011548 INTS2 (ENSOARG00020011586) MED13 (ENSOARG00020011969) RNFT1 (ENSOARG00020012186) RPS6KB1 (ENSOARG00020012243) TUBD1 (ENSOARG00020012492) ENSOARG00020012920 VMP1 (ENSOARG00020012971) PTRH2 (ENSOARG00020013039) Rambouillet Sheep MODERN SPECIES 21 NACC1 (ENSOARG00020008294) TRMT1 (ENSOARG00020008381) LYL1 (ENSOARG00020008580) #7 NFIX (ENSOARG00020008684) #8 GADD45GIP1 (ENSOARG00020009801) #10 RAD23A (ENSOARG00020009840) #11 CALR (ENSOARG00020009931) #12 FARSA (ENSOARG00020010040) #13 GCDH (ENSOARG00020010253) #15 KLF1 (ENSOARG00020010329) #16 DNASE2 (ENSOARG00020010363) #17 MAST1 (ENSOARG00020010455) #18 RTBDN (ENSOARG00020011079) #19 RNASEH2A (ENSOARG00020011239) #20 THSD8 (ENSOARG00020011281) #21 PRDX2 (ENSOARG00020011331) #22 JUNB (ENSOARG00020011427) #23 BEST2 (ENSOARG00020011833) #25 ASNA1 (ENSOARG00020011930) #26 TRIR (ENSOARG00020012000) #27 TNPO2 (ENSOARG00020012156) #28 FBXW9 (ENSOARG00020012297) #29 ENSOARG00020012653 DHPS (ENSOARG00020012703) #31 WDR83 (ENSOARG00020012835) #32 WDR83OS (ENSOARG00020012900) #33 MAN2B1 (ENSOARG00020012993) #34 ENSOARG00020013719 ENSOARG00020000232 ENSOARG00020000407 ##35 ENSOARG00020000419 ##35 Goat DUPLICATION Goat MODERN SPECIES 10 ENSCHIG00000019766 C17orf78 (ENSCHIG00000025907) ACACA (ENSCHIG00000014642) AATF (ENSCHIG00000010438) LHX1 (ENSCHIG00000022067) MRM1 (ENSCHIG00000008558) DHRS11 (ENSCHIG00000014977) GGNBP2 (ENSCHIG00000018194) PIGW (ENSCHIG00000013107) MYO19 (ENSCHIG00000025193) ENSCHIG00000015170 CA4 (ENSCHIG00000026507) ENSCHIG00000019250 CHCT1 (ENSCHIG00000012925) APPBP2 (ENSCHIG00000027119) ENSCHIG00000017975 #22 PPM1D (ENSCHIG00000023763) BCAS3 (ENSCHIG00000015855) TBX2 (ENSCHIG00000014418) TBX4 (ENSCHIG00000020604) ENSCHIG00000023949 BRIP1 (ENSCHIG00000015958) INTS2 (ENSCHIG00000025276) MED13 (ENSCHIG00000022580) ENSCHIG00000019101 RPS6KB1 (ENSCHIG00000005906) TUBD1 (ENSCHIG00000017656) VMP1 (ENSCHIG00000026133) PTRH2 (ENSCHIG00000010059) CLTC (ENSCHIG00000025765) DHX40 (ENSCHIG00000016173) Goat MODERN SPECIES 26 NACC1 (ENSCHIG00000023771) TRMT1 (ENSCHIG00000013569) LYL1 (ENSCHIG00000027128) #7 NFIX (ENSCHIG00000022384) #8 GADD45GIP1 (ENSCHIG00000017823) #10 RAD23A (ENSCHIG00000017626) #11 CALR (ENSCHIG00000023446) #12 FARSA (ENSCHIG00000022617) #13 SYCE2 (ENSCHIG00000023183) #14 GCDH (ENSCHIG00000008032) #15 KLF1 (ENSCHIG00000024201) #16 DNASE2 (ENSCHIG00000018237) #17 MAST1 (ENSCHIG00000012078) #18 RTBDN (ENSCHIG00000018795) #19 RNASEH2A (ENSCHIG00000014460) #20 ENSCHIG00000008839 #22 JUNB (ENSCHIG00000007846) #23 HOOK2 (ENSCHIG00000017730) #24 BEST2 (ENSCHIG00000009210) #25 GET3 (ENSCHIG00000023078) #26 TRIR (ENSCHIG00000017848) #27 TNPO2 (ENSCHIG00000011718) #28 FBXW9 (ENSCHIG00000027225) #29 ENSCHIG00000018933 DHPS (ENSCHIG00000011017) #31 WDR83 (ENSCHIG00000025793) #32 WDR83OS (ENSCHIG00000020903) #33 MAN2B1 (ENSCHIG00000001921) #34 ENSCHIG00000016295 ENSCHIG00000019636 ENSCHIG00000008992 ##35 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1135 ENSMMSG00000010886 ENSMMSG00000010857 ACACA (ENSMMSG00000009380) AATF (ENSMMSG00000009137) LHX1 (ENSMMSG00000009094) MRM1 (ENSMMSG00000009048) DHRS11 (ENSMMSG00000009003) GGNBP2 (ENSMMSG00000008896) PIGW (ENSMMSG00000008870) MYO19 (ENSMMSG00000008719) ZNHIT3 (ENSMMSG00000008678) CA4 (ENSMMSG00000008660) ENSMMSG00000008476 CHCT1 (ENSMMSG00000008435) APPBP2 (ENSMMSG00000008396) ENSMMSG00000008344 #22 PPM1D (ENSMMSG00000008295) BCAS3 (ENSMMSG00000008066) TBX2 (ENSMMSG00000007917) TBX4 (ENSMMSG00000018587) ENSMMSG00000018558 BRIP1 (ENSMMSG00000018426) INTS2 (ENSMMSG00000018213) MED13 (ENSMMSG00000018082) ENSMMSG00000018037 ENSMMSG00000017945 RNFT1 (ENSMMSG00000017906) RPS6KB1 (ENSMMSG00000017714) TUBD1 (ENSMMSG00000017458) VMP1 (ENSMMSG00000017374) PTRH2 (ENSMMSG00000017362) Siberian musk deer MODERN SPECIES 34 TRMT1 (ENSMMSG00000018011) LYL1 (ENSMMSG00000017977) #7 NFIX (ENSMMSG00000017773) #8 GADD45GIP1 (ENSMMSG00000017735) #10 RAD23A (ENSMMSG00000017530) #11 ENSMMSG00000017464 #12 FARSA (ENSMMSG00000017435) #13 SYCE2 (ENSMMSG00000017412) #14 GCDH (ENSMMSG00000017382) #15 KLF1 (ENSMMSG00000017358) #16 DNASE2 (ENSMMSG00000017335) #17 MAST1 (ENSMMSG00000017118) #18 RTBDN (ENSMMSG00000017054) #19 RNASEH2A (ENSMMSG00000017025) #20 THSD8 (ENSMMSG00000017010) #21 ENSMMSG00000016984 #22 JUNB (ENSMMSG00000016968) #23 HOOK2 (ENSMMSG00000016914) #24 BEST2 (ENSMMSG00000016855) #25 GET3 (ENSMMSG00000016786) #26 TRIR (ENSMMSG00000016742) #27 TNPO2 (ENSMMSG00000016676) #28 FBXW9 (ENSMMSG00000016611) #29 ENSMMSG00000016585 DHPS (ENSMMSG00000016482) #31 WDR83 (ENSMMSG00000016414) #32 ENSMMSG00000016351 #33 MAN2B1 (ENSMMSG00000016295) #34 ENSMMSG00000016218 ##35 ENSMMSG00000016203 ##35 ENSMMSG00000016189 Cetacea ANCESTRAL SPECIES 1 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.m #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##35 ENSGT00440000039287 ENSGT00940000163044 Blue whale MODERN SPECIES 14 TRMT1 (ENSBMSG00010006254) LYL1 (ENSBMSG00010006239) #7 NFIX (ENSBMSG00010006215) #8 GADD45GIP1 (ENSBMSG00010006182) #10 RAD23A (ENSBMSG00010006168) #11 ENSBMSG00010006144 #12 FARSA (ENSBMSG00010006124) #13 ENSBMSG00010006111 GCDH (ENSBMSG00010006092) #15 KLF1 (ENSBMSG00010006067) #16 DNASE2 (ENSBMSG00010006057) #17 MAST1 (ENSBMSG00010006004) #18 RTBDN (ENSBMSG00010005967) #19 RNASEH2A (ENSBMSG00010005947) #20 THSD8 (ENSBMSG00010005934) #21 PRDX2 (ENSBMSG00010005921) #22 JUNB (ENSBMSG00010005909) #23 HOOK2 (ENSBMSG00010005872) #24 BEST2 (ENSBMSG00010005835) #25 GET3 (ENSBMSG00010005817) #26 TRIR (ENSBMSG00010005806) #27 TNPO2 (ENSBMSG00010005781) #28 FBXW9 (ENSBMSG00010005739) #29 ENSBMSG00010005715 DHPS (ENSBMSG00010005704) #31 WDR83 (ENSBMSG00010005695) #32 WDR83OS (ENSBMSG00010005684) #33 MAN2B1 (ENSBMSG00010005667) #34 ENSBMSG00010005656 ENSBMSG00010005651 ##35 ENSBMSG00010005640 ##35 Odontoceti ANCESTRAL SPECIES 1 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.m #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a ##35 ENSGT00440000039287 ENSGT00940000163044 Sperm whale MODERN SPECIES 26 GADD45GIP1 (ENSPCTG00005019623) #10 RAD23A (ENSPCTG00005019572) #11 CALR (ENSPCTG00005019546) #12 FARSA (ENSPCTG00005019481) #13 SYCE2 (ENSPCTG00005019462) #14 GCDH (ENSPCTG00005019424) #15 KLF1 (ENSPCTG00005019380) #16 DNASE2 (ENSPCTG00005019363) #17 MAST1 (ENSPCTG00005019033) #18 RTBDN (ENSPCTG00005018893) #19 RNASEH2A (ENSPCTG00005018850) #20 THSD8 (ENSPCTG00005018824) #21 PRDX2 (ENSPCTG00005018785) #22 JUNB (ENSPCTG00005018767) #23 HOOK2 (ENSPCTG00005018712) #24 BEST2 (ENSPCTG00005018605) #25 ASNA1 (ENSPCTG00005018458) #26 TRIR (ENSPCTG00005018441) #27 TNPO2 (ENSPCTG00005018339) #28 FBXW9 (ENSPCTG00005018271) #29 ENSPCTG00005018240 DHPS (ENSPCTG00005018077) #31 WDR83 (ENSPCTG00005018037) #32 WDR83OS (ENSPCTG00005017991) #33 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.m #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##35 ENSGT00440000039287 ENSGT00940000163783 Dolphin MODERN SPECIES 135 GADD45GIP1 (ENSTTRG00000003602) #10 RAD23A (ENSTTRG00000003601) #11 CALR (ENSTTRG00000003600) #12 FARSA (ENSTTRG00000003599) #13 SYCE2 (ENSTTRG00000003598) #14 GCDH (ENSTTRG00000003597) #15 KLF1 (ENSTTRG00000003596) #16 DNASE2 (ENSTTRG00000003595) #17 MAST1 (ENSTTRG00000003594) #18 RTBDN (ENSTTRG00000003593) #19 RNASEH2A (ENSTTRG00000003592) #20 PRDX2 (ENSTTRG00000003591) #22 JUNB (ENSTTRG00000003590) #23 HOOK2 (ENSTTRG00000003588) #24 BEST2 (ENSTTRG00000003586) #25 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.m #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##35 ENSGT00440000039287 ENSGT00940000163783 Monodontidae ANCESTRAL SPECIES 17 ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.m #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00870000137755 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##35 ENSGT00440000039287 ENSGT00940000163783 Beluga whale MODERN SPECIES 27 NACC1 (ENSDLEG00000010956) TRMT1 (ENSDLEG00000010945) LYL1 (ENSDLEG00000010935) #7 NFIX (ENSDLEG00000010831) #8 GADD45GIP1 (ENSDLEG00000010807) #10 RAD23A (ENSDLEG00000010781) #11 CALR (ENSDLEG00000010762) #12 FARSA (ENSDLEG00000010737) #13 SYCE2 (ENSDLEG00000010725) #14 KLF1 (ENSDLEG00000010698) #16 GCDH (ENSDLEG00000010654) #15 DNASE2 (ENSDLEG00000010624) #17 MAST1 (ENSDLEG00000010566) #18 RTBDN (ENSDLEG00000010548) #19 RNASEH2A (ENSDLEG00000010529) #20 PRDX2 (ENSDLEG00000010520) #22 JUNB (ENSDLEG00000010512) #23 HOOK2 (ENSDLEG00000010436) #24 BEST2 (ENSDLEG00000010397) #25 ASNA1 (ENSDLEG00000010378) #26 TRIR (ENSDLEG00000010365) #27 TNPO2 (ENSDLEG00000010236) #28 FBXW9 (ENSDLEG00000010197) #29 DHPS (ENSDLEG00000010176) #31 WDR83 (ENSDLEG00000010152) #32 WDR83OS (ENSDLEG00000010133) #33 MAN2B1 (ENSDLEG00000010021) #34 ENSDLEG00000010003 ##35 ENSDLEG00000009987 ##35 ENSDLEG00000009975 ##35 ENSDLEG00000009886 ##35 Narwhal MODERN SPECIES 298 LYL1 (ENSMMNG00015005401) #7 NFIX (ENSMMNG00015005457) #8 ENSMMNG00015005553 GADD45GIP1 (ENSMMNG00015005584) #10 RAD23A (ENSMMNG00015004840) #11 ENSMMNG00015004845 #12 FARSA (ENSMMNG00015004851) #13 SYCE2 (ENSMMNG00015004858) #14 GCDH (ENSMMNG00015004861) #15 KLF1 (ENSMMNG00015004865) #16 DNASE2 (ENSMMNG00015004869) #17 MAST1 (ENSMMNG00015004880) #18 RTBDN (ENSMMNG00015004901) #19 RNASEH2A (ENSMMNG00015004907) #20 THSD8 (ENSMMNG00015004915) #21 PRDX2 (ENSMMNG00015004919) #22 JUNB (ENSMMNG00015004931) #23 HOOK2 (ENSMMNG00015004937) #24 BEST2 (ENSMMNG00015004949) #25 GET3 (ENSMMNG00015004960) #26 TRIR (ENSMMNG00015004970) #27 TNPO2 (ENSMMNG00015004980) #28 FBXW9 (ENSMMNG00015005000) #29 ENSMMNG00015005005 #30 DHPS (ENSMMNG00015005018) #31 WDR83 (ENSMMNG00015005037) #32 WDR83OS (ENSMMNG00015005049) #33 MAN2B1 (ENSMMNG00015005071) #34 ENSMMNG00015005109 ENSMMNG00015005113 ##35 ENSMMNG00015005127 ##35 Vaquita MODERN SPECIES 14 NACC1 (ENSPSNG00000005645) TRMT1 (ENSPSNG00000005699) LYL1 (ENSPSNG00000005801) #7 NFIX (ENSPSNG00000005985) #8 ENSPSNG00000006174 GADD45GIP1 (ENSPSNG00000006226) #10 RAD23A (ENSPSNG00000006274) #11 CALR (ENSPSNG00000006361) #12 FARSA (ENSPSNG00000006551) #13 GCDH (ENSPSNG00000006697) #15 KLF1 (ENSPSNG00000006733) #16 DNASE2 (ENSPSNG00000006758) #17 MAST1 (ENSPSNG00000006815) #18 RTBDN (ENSPSNG00000007000) #19 RNASEH2A (ENSPSNG00000007087) #20 PRDX2 (ENSPSNG00000007156) #22 JUNB (ENSPSNG00000007194) #23 HOOK2 (ENSPSNG00000007235) #24 BEST2 (ENSPSNG00000007304) #25 TRIR (ENSPSNG00000007370) #27 TNPO2 (ENSPSNG00000007421) #28 FBXW9 (ENSPSNG00000000092) #29 ENSPSNG00000000122 DHPS (ENSPSNG00000000212) #31 WDR83OS (ENSPSNG00000000152) #33 WDR83 (ENSPSNG00000000274) #32 MAN2B1 (ENSPSNG00000000314) #34 ENSPSNG00000000399 ##35 ENSPSNG00000000426 ##35 ENSPSNG00000000476 ##35 ENSPSNG00000000493 ##35 Atlantogenata ANCESTRAL SPECIES 41 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a.i.a #34 ENSGT01030000234638.b.a.a.i.b.a #34 ENSGT00390000016735 ENSGT00390000000053 ENSGT00940000159680 Xenarthra ANCESTRAL SPECIES 1075 ENSGT00940000157700 #18 ENSGT00940000171026 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000160152 #24 Armadillo MODERN SPECIES 4420 MAST1 (ENSDNOG00000041338) #18 ENSDNOG00000047463 RNASEH2A (ENSDNOG00000036532) #20 PRDX2 (ENSDNOG00000047352) #22 HOOK2 (ENSDNOG00000030970) #24 Afrotheria ANCESTRAL SPECIES 38 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a.i.a #34 ENSGT01030000234638.b.a.a.i.b.a #34 ENSGT00390000016735 ENSGT00390000000053 ENSGT00940000159680 Afrotheria_a ANCESTRAL SPECIES 39 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a.i.a #34 ENSGT01030000234638.b.a.a.i.b.a #34 ENSGT00390000016735 ENSGT00390000000053 ENSGT00940000159680 Hyrax MODERN SPECIES 574 ENSPCAG00000015945 #10 RAD23A (ENSPCAG00000015877) #11 CALR (ENSPCAG00000015789) #12 FARSA (ENSPCAG00000015721) #13 SYCE2 (ENSPCAG00000015680) #14 GCDH (ENSPCAG00000015614) #15 KLF1 (ENSPCAG00000015589) #16 MAST1 (ENSPCAG00000015438) #18 RTBDN (ENSPCAG00000015367) #19 RNASEH2A (ENSPCAG00000015319) #20 PRDX2 (ENSPCAG00000015277) #22 JUNB (ENSPCAG00000015270) #23 HOOK2 (ENSPCAG00000015171) #24 BEST2 (ENSPCAG00000015104) #25 GET3 (ENSPCAG00000015072) #26 TRIR (ENSPCAG00000015051) #27 TNPO2 (ENSPCAG00000014916) #28 FBXW9 (ENSPCAG00000014854) #29 WDR83 (ENSPCAG00000014813) #32 WDR83OS (ENSPCAG00000014783) #33 MAN2B1 (ENSPCAG00000014647) #34 Elephant MODERN SPECIES 270 TRMT1 (ENSLAFG00000014072) LYL1 (ENSLAFG00000005235) #7 NFIX (ENSLAFG00000017040) #8 DAND5 (ENSLAFG00000002928) #9 GADD45GIP1 (ENSLAFG00000027811) #10 RAD23A (ENSLAFG00000029782) #11 CALR (ENSLAFG00000016157) #12 FARSA (ENSLAFG00000016154) #13 ENSLAFG00000027765 #14 GCDH (ENSLAFG00000016147) #15 KLF1 (ENSLAFG00000016145) #16 DNASE2 (ENSLAFG00000016136) #17 MAST1 (ENSLAFG00000016119) #18 RTBDN (ENSLAFG00000016111) #19 RNASEH2A (ENSLAFG00000015571) #20 PRDX2 (ENSLAFG00000008526) #22 JUNB (ENSLAFG00000008530) #23 HOOK2 (ENSLAFG00000021382) #24 BEST2 (ENSLAFG00000032080) #25 GET3 (ENSLAFG00000011727) #26 TRIR (ENSLAFG00000011724) #27 TNPO2 (ENSLAFG00000003661) #28 FBXW9 (ENSLAFG00000026488) #29 DHPS (ENSLAFG00000027105) #31 WDR83 (ENSLAFG00000031530) #32 WDR83OS (ENSLAFG00000032207) #33 ENSLAFG00000008483 #34 ENSLAFG00000031542 ENSLAFG00000025944 ACP5 (ENSLAFG00000030903) ENSLAFG00000032392 #34 Marsupialia ANCESTRAL SPECIES 1 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00390000016735 ENSGT00390000000053 Opossum MODERN SPECIES 2 ADGRB1 (ENSMODG00000000556) ENSMODG00000000048 ARC (ENSMODG00000000033) JRK (ENSMODG00000024367) THEM6 (ENSMODG00000000042) ENSMODG00000024365 ENSMODG00000039273 LYPD2 (ENSMODG00000000038) LYNX1 (ENSMODG00000029659) ENSMODG00000027533 ENSMODG00000027916 ENSMODG00000000019 ENSMODG00000029040 #19 ENSMODG00000010616 RNASEH2A (ENSMODG00000006997) #20 PRDX2 (ENSMODG00000006978) #22 JUNB (ENSMODG00000044926) #23 HOOK2 (ENSMODG00000006959) #24 BEST2 (ENSMODG00000006822) #25 GET3 (ENSMODG00000006913) #26 TRIR (ENSMODG00000025628) #27 ENSMODG00000006894 TNPO2 (ENSMODG00000006888) #28 FBXW9 (ENSMODG00000006836) #29 ENSMODG00000044399 ENSMODG00000006807 #31 WDR83 (ENSMODG00000006785) #32 WDR83OS (ENSMODG00000045969) #33 MAN2B1 (ENSMODG00000050551) #34 ACP5 (ENSMODG00000006705) ELOF1 (ENSMODG00000006691) Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.b #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a.g #34 ENSGT00390000016735 ENSGT00390000000053 Diprotodontia ANCESTRAL SPECIES 20 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.b #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a.g #34 ENSGT00390000016735 ENSGT00390000000053 Diprotodontia_a ANCESTRAL SPECIES 16 ENSGT00530000063646.b ENSGT00940000162404 #7 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00530000063926.b #9 ENSGT00390000013719 #10 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856.b #16 ENSGT00390000002634.a #17 ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a.g #34 ENSGT00390000016735 ENSGT00390000000053 koala MODERN SPECIES 58 TRMT1 (ENSPCIG00000019273) LYL1 (ENSPCIG00000019276) #7 NFIX (ENSPCIG00000019280) #8 ENSPCIG00000033702 #9 ENSPCIG00000019285 #10 RAD23A (ENSPCIG00000019286) #11 CALR (ENSPCIG00000019290) #12 FARSA (ENSPCIG00000019294) #13 ENSPCIG00000019297 #14 GCDH (ENSPCIG00000019299) #15 ENSPCIG00000014086 #16 DNASE2 (ENSPCIG00000014087) #17 MAST1 (ENSPCIG00000014093) #18 ENSPCIG00000014111 #19 RNASEH2A (ENSPCIG00000014119) #20 PRDX2 (ENSPCIG00000014122) #22 JUNB (ENSPCIG00000014125) #23 HOOK2 (ENSPCIG00000012585) #24 BEST2 (ENSPCIG00000015279) #25 GET3 (ENSPCIG00000015293) #26 TRIR (ENSPCIG00000015300) #27 ENSPCIG00000015303 TNPO2 (ENSPCIG00000015327) #28 FBXW9 (ENSPCIG00000015866) #29 ENSPCIG00000015871 DHPS (ENSPCIG00000015878) #31 WDR83 (ENSPCIG00000015889) #32 WDR83OS (ENSPCIG00000015902) #33 MAN2B1 (ENSPCIG00000015894) #34 ACP5 (ENSPCIG00000014525) ELOF1 (ENSPCIG00000017821) Common wonbat MODERN SPECIES 580 TRMT1 (ENSVURG00010012721) LYL1 (ENSVURG00010012714) #7 NFIX (ENSVURG00010012686) #8 ENSVURG00010012675 #9 GADD45GIP1 (ENSVURG00010012667) #10 RAD23A (ENSVURG00010012654) #11 CALR (ENSVURG00010012640) #12 FARSA (ENSVURG00010012630) #13 GCDH (ENSVURG00010012611) #15 ENSVURG00010012587 #16 DNASE2 (ENSVURG00010012555) #17 ENSVURG00010012540 #18 ENSVURG00010012528 #18 ENSVURG00010012521 RNASEH2A (ENSVURG00010012512) #20 PRDX2 (ENSVURG00010012491) #22 JUNB (ENSVURG00010012482) #23 HOOK2 (ENSVURG00010012454) #24 BEST2 (ENSVURG00010012432) #25 GET3 (ENSVURG00010012428) #26 TRIR (ENSVURG00010012422) #27 ENSVURG00010012419 TNPO2 (ENSVURG00010012404) #28 FBXW9 (ENSVURG00010012393) #29 ENSVURG00010012367 DHPS (ENSVURG00010012351) #31 WDR83 (ENSVURG00010012342) #32 WDR83OS (ENSVURG00010012335) #33 MAN2B1 (ENSVURG00010012315) #34 ACP5 (ENSVURG00010012298) ELOF1 (ENSVURG00010012285) Wallaby MODERN SPECIES 11364 RNASEH2A (ENSMEUG00000006001) #20 PRDX2 (ENSMEUG00000005988) #22 Tasmanian devil MODERN SPECIES IER2 (ENSSHAG00000022046) TRMT1 (ENSSHAG00000014381) ENSSHAG00000030868 #7 NFIX (ENSSHAG00000014449) #8 ENSSHAG00000031388 GADD45GIP1 (ENSSHAG00000030763) #10 RAD23A (ENSSHAG00000014944) #11 CALR (ENSSHAG00000022448) #12 FARSA (ENSSHAG00000015006) #13 ENSSHAG00000015176 #14 GCDH (ENSSHAG00000015183) #15 ENSSHAG00000027697 #16 MAST1 (ENSSHAG00000015366) #18 ENSSHAG00000029919 RNASEH2A (ENSSHAG00000021970) #20 PRDX2 (ENSSHAG00000015596) #22 JUNB (ENSSHAG00000031673) #23 HOOK2 (ENSSHAG00000015654) #24 BEST2 (ENSSHAG00000015677) #25 GET3 (ENSSHAG00000015720) #26 ENSSHAG00000021974 FBXW9 (ENSSHAG00000015858) #29 ENSSHAG00000022042 TNPO2 (ENSSHAG00000028738) #28 DHPS (ENSSHAG00000024479) #31 WDR83 (ENSSHAG00000015933) #32 MAN2B1 (ENSSHAG00000015955) #34 ACP5 (ENSSHAG00000026583) ELOF1 (ENSSHAG00000021916) CNN1 (ENSSHAG00000004625) ZNF653 (ENSSHAG00000023239) Platypus MODERN SPECIES 85 YJU2B (ENSOANG00000001226) ENSOANG00000040676 CACNA1A (ENSOANG00000012652) IER2 (ENSOANG00000041821) NACC1 (ENSOANG00000006845) LYL1 (ENSOANG00000006846) #7 NFIX (ENSOANG00000047105) #8 GADD45GIP1 (ENSOANG00000045483) #10 RAD23A (ENSOANG00000040687) #11 CALR (ENSOANG00000009799) #12 FARSA (ENSOANG00000043112) #13 GCDH (ENSOANG00000009077) #15 ENSOANG00000047645 #16 ENSOANG00000007093 #17 ENSOANG00000009787 #18 PRDX2 (ENSOANG00000009080) #22 JUNB (ENSOANG00000007596) #23 HOOK2 (ENSOANG00000014251) #24 BEST2 (ENSOANG00000045815) #25 GET3 (ENSOANG00000007648) #26 ENSOANG00000049168 #27 TNPO2 (ENSOANG00000010051) #28 FBXW9 (ENSOANG00000042722) #29 ENSOANG00000039942 ENSOANG00000013176 #31 WDR83 (ENSOANG00000013177) #32 WDR83OS (ENSOANG00000013178) #33 MAN2B1 (ENSOANG00000040037) #34 ACP5 (ENSOANG00000013181) ELOF1 (ENSOANG00000011944) CNN1 (ENSOANG00000040470) Sauria ANCESTRAL SPECIES 22 ENSGT00860000135639 ENSGT00390000013719 #10 ENSGT00950000182917.a.b.b ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000164108.a ENSGT00940000164623.C ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 Archelosauria ANCESTRAL SPECIES 28 ENSGT00950000185200 ENSGT00390000013719 #10 ENSGT00950000182917.a.b.b ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000164108.a ENSGT00940000164623.C ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 Cryptodira ANCESTRAL SPECIES 39 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00950000182917.a.b.b ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #12 ENSGT00390000006387 #13 ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000002634.a #17 ENSGT00940000164108.a ENSGT00940000164623.C ENSGT00940000157700 #18 ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00940000158629 ENSGT00390000015318 ENSGT00420000029753.b ENSGT00940000167241 ENSGT00390000016650 ENSGT00940000156539 ENSGT00940000154277.a.b ENSGT00390000018130.b ENSGT00390000003464 ENSGT00740000116213 ENSGT01030000235254 ENSGT00940000158765 Testudinoidea ANCESTRAL SPECIES 38 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 Testudinidae ANCESTRAL SPECIES 41 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 Goode s thornscrub tortoise MODERN SPECIES 152 NFIX (ENSGEVG00005019340) #8 GADD45GIP1 (ENSGEVG00005019331) #10 ENSGEVG00005019296 RAD23A (ENSGEVG00005019280) #11 CALR (ENSGEVG00005019273) #12 FARSA (ENSGEVG00005019260) #13 ENSGEVG00005019250 GCDH (ENSGEVG00005019243) #15 KLF1 (ENSGEVG00005019235) #16 DNASE2 (ENSGEVG00005019228) #17 ENSGEVG00005019218 ENSGEVG00005019202 #18 ENSGEVG00005019190 #18 ENSGEVG00005019178 #19 RNASEH2A (ENSGEVG00005019166) #20 PRDX2 (ENSGEVG00005019161) #22 JUNB (ENSGEVG00005019155) #23 HOOK2 (ENSGEVG00005019137) #24 BEST2 (ENSGEVG00005019104) #25 GET3 (ENSGEVG00005019088) #26 TRIR (ENSGEVG00005019081) #27 ENSGEVG00005019076 TNPO2 (ENSGEVG00005019053) #28 FBXW9 (ENSGEVG00005019042) #29 ENSGEVG00005019028 DHPS (ENSGEVG00005019003) #31 WDR83 (ENSGEVG00005018986) #32 WDR83OS (ENSGEVG00005018973) #33 MAN2B1 (ENSGEVG00005018951) #34 TRMT1 (ENSGEVG00005018931) NACC1 (ENSGEVG00005018916) Abingdon island giant tortoise MODERN SPECIES 2622 MAST1 (ENSCABG00000010109) #18 ENSCABG00000010110 #19 RNASEH2A (ENSCABG00000010111) #20 PRDX2 (ENSCABG00000010112) #22 JUNB (ENSCABG00000010113) #23 HOOK2 (ENSCABG00000010114) #24 BEST2 (ENSCABG00000010115) #25 ENSCABG00000010116 GET3 (ENSCABG00000010117) #26 TRIR (ENSCABG00000010118) #27 ENSCABG00000010120 TNPO2 (ENSCABG00000010122) #28 FBXW9 (ENSCABG00000010128) #29 ENSCABG00000010131 DHPS (ENSCABG00000010139) #31 WDR83OS (ENSCABG00000010187) #33 ENSCABG00000010190 #32 MAN2B1 (ENSCABG00000010192) #34 TRMT1 (ENSCABG00000010193) Emydidae ANCESTRAL SPECIES 48 ENSGT01010000222313.A.b.a.c ENSGT00940000159680 ENSGT00390000000053 ENSGT00390000016735 ENSGT00950000182916.a.b.a.a.a.b.b #8 ENSGT00390000013719 #10 ENSGT00950000182917.a.b.b ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.b #12 ENSGT00390000006387 #13 ENSGT00940000163154.B.e.b.d.a ENSGT00390000004872 #14 ENSGT00940000158116 #15 ENSGT00940000161856 #16 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 painted turtle MODERN SPECIES 2403 CNN1 (ENSCPBG00000023957) ELOF1 (ENSCPBG00000023953) ACP5 (ENSCPBG00000023952) NFIX (ENSCPBG00000023946) #8 GADD45GIP1 (ENSCPBG00000023940) #10 ENSCPBG00000023933 RAD23A (ENSCPBG00000023930) #11 ENSCPBG00000023916 FARSA (ENSCPBG00000023915) #13 ENSCPBG00000023914 SYCE2 (ENSCPBG00000023913) #14 GCDH (ENSCPBG00000023912) #15 MAST1 (ENSCPBG00000023911) #18 ENSCPBG00000023910 #19 RNASEH2A (ENSCPBG00000023909) #20 PRDX2 (ENSCPBG00000023908) #22 JUNB (ENSCPBG00000023907) #23 HOOK2 (ENSCPBG00000023905) #24 BEST2 (ENSCPBG00000023904) #25 GET3 (ENSCPBG00000023903) #26 TRIR (ENSCPBG00000023902) #27 ENSCPBG00000023900 TNPO2 (ENSCPBG00000023892) #28 FBXW9 (ENSCPBG00000023887) #29 ENSCPBG00000023879 DHPS (ENSCPBG00000023877) #31 ENSCPBG00000023873 #32 WDR83OS (ENSCPBG00000023872) #33 MAN2B1 (ENSCPBG00000023871) #34 TRMT1 (ENSCPBG00000023866) NACC1 (ENSCPBG00000023862) Three-toed box turtle MODERN SPECIES 382 ENSTMTG00000018051 CNN1 (ENSTMTG00000018057) ELOF1 (ENSTMTG00000018068) ACP5 (ENSTMTG00000018088) NFIX (ENSTMTG00000018091) #8 GADD45GIP1 (ENSTMTG00000018100) #10 RAD23A (ENSTMTG00000018106) #11 CALR (ENSTMTG00000018116) #12 FARSA (ENSTMTG00000018129) #13 SYCE2 (ENSTMTG00000018152) #14 ENSTMTG00000018174 GCDH (ENSTMTG00000018178) #15 KLF1 (ENSTMTG00000018195) #16 ENSTMTG00000018201 RNASEH2A (ENSTMTG00000018210) #20 PRDX2 (ENSTMTG00000018231) #22 HOOK2 (ENSTMTG00000018274) #24 BEST2 (ENSTMTG00000018625) #25 GET3 (ENSTMTG00000018660) #26 ENSTMTG00000018682 TNPO2 (ENSTMTG00000018696) #28 FBXW9 (ENSTMTG00000018762) #29 ENSTMTG00000018786 WDR83 (ENSTMTG00000018797) #32 WDR83OS (ENSTMTG00000018813) #33 MAN2B1 (ENSTMTG00000018824) #34 TRMT1 (ENSTMTG00000018872) NACC1 (ENSTMTG00000018902) CACNA1A (ENSTMTG00000019100) ENSTMTG00000020857 YJU2B (ENSTMTG00000020864) Chinese turtle MODERN SPECIES 181 NFIX (ENSPSIG00000013902) #8 ENSPSIG00000013785 RAD23A (ENSPSIG00000013229) #11 ENSPSIG00000012928 FARSA (ENSPSIG00000012701) #13 SYCE2 (ENSPSIG00000012696) #14 GCDH (ENSPSIG00000012491) #15 MAST1 (ENSPSIG00000012191) #18 ENSPSIG00000012165 ENSPSIG00000012044 #19 RNASEH2A (ENSPSIG00000012039) #20 PRDX2 (ENSPSIG00000012036) #22 JUNB (ENSPSIG00000000714) #23 ENSPSIG00000000707 GET3 (ENSPSIG00000012030) #26 ENSPSIG00000012015 TNPO2 (ENSPSIG00000010215) #28 FBXW9 (ENSPSIG00000009970) #29 DHPS (ENSPSIG00000009859) #31 WDR83 (ENSPSIG00000008218) #32 WDR83OS (ENSPSIG00000008145) #33 ENSPSIG00000006881 ENSPSIG00000006121 Lepidosauria ANCESTRAL SPECIES 11 ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 ENSGT00530000063790.a ENSGT00530000063632.A ENSGT00940000158851 ENSGT00940000156259.b ENSGT00940000155705.b ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00940000158629 ENSGT00390000015318 ENSGT00420000029753.b Episquamata ANCESTRAL SPECIES 4 ENSGT00940000154726 ENSGT00940000156685 ENSGT00940000159136 ENSGT00940000156722 ENSGT00940000154245.A ENSGT00940000159531 ENSGT00390000009693 ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000179707 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT00900000141021.b.b.d ENSGT00940000163101 ENSGT00940000159327 ENSGT00530000063646.b ENSGT01030000234638.b.a.a #34 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000154726 ENSGT00940000156685 ENSGT00940000159136 ENSGT00940000156722 ENSGT00940000154245.A ENSGT00940000159531 ENSGT00390000009693 ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000179707 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT00900000141021.b.b.d ENSGT00940000163101 ENSGT00940000159327 ENSGT00530000063646.b ENSGT01030000234638.b.a.a #34 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000156685 ENSGT00940000159136 ENSGT00940000154245.A ENSGT00940000159531.gb ENSGT00940000159531.fb.a ENSGT01010000230014 ENSGT00390000009693 ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000179707 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT00900000141021.b.b.d ENSGT00940000163101 ENSGT00940000159327 ENSGT00530000063646.b ENSGT01030000234638.b.a.a #34 Elapidae_a ANCESTRAL SPECIES 11 ENSGT00940000156685 ENSGT00940000159136 ENSGT00940000154245.A ENSGT00940000159531.gb ENSGT00940000159531.fb.a ENSGT01010000230014 ENSGT00390000009693 ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000179707 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT00900000141021.b.b.d ENSGT00940000163101 ENSGT00940000159327 ENSGT00530000063646.b ENSGT01030000234638.b.a.a #34 Acanthophiinae ANCESTRAL SPECIES 12 ENSGT00940000154726 ENSGT00940000156685 ENSGT00940000159136 ENSGT00940000154245.A ENSGT00940000159531.gb ENSGT00940000159531.fb.a ENSGT00390000009693 ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000179707 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817.bb #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT00900000141021.b.b.d ENSGT00940000163101 ENSGT00940000159327 ENSGT00530000063646.b ENSGT01030000234638.b.a.a #34 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 158 ENSNSUG00000002522 ENSNSUG00000002605 ENSNSUG00000002613 ENSNSUG00000002618 ENSNSUG00000002619 ENSNSUG00000002622 ENSNSUG00000002624 ENSNSUG00000002626 ENSNSUG00000002634 ENSNSUG00000002637 ENSNSUG00000002641 ENSNSUG00000002647 ENSNSUG00000002649 ENSNSUG00000002651 ENSNSUG00000002652 #22 ENSNSUG00000002659 #24 ENSNSUG00000003169 #25 ENSNSUG00000003170 #26 TRIR (ENSNSUG00000003175) #27 ENSNSUG00000003178 #28 ENSNSUG00000003413 ENSNSUG00000003415 #29 ENSNSUG00000003420 #32 ENSNSUG00000003435 #33 ENSNSUG00000003436 ENSNSUG00000003439 ENSNSUG00000003446 ENSNSUG00000003450 ENSNSUG00000003677 #34 Mainland tiger snake MODERN SPECIES 156 ENSNSUG00000009965 ENSNSUG00000010008 ENSNSUG00000010009 ENSNSUG00000010011 ENSNSUG00000010012 ENSNSUG00000010013 ENSNSUG00000010015 ENSNSUG00000010420 ENSNSUG00000010422 ENSNSUG00000010423 ENSNSUG00000010424 ENSNSUG00000010425 ENSNSUG00000010428 ENSNSUG00000010429 ENSNSUG00000010430 #22 ENSNSUG00000010433 #24 ENSNSUG00000010447 #25 ENSNSUG00000010450 #26 ENSNSUG00000010452 ENSNSUG00000010454 #28 ENSNSUG00000010582 ENSNSUG00000010583 #29 ENSNSUG00000010585 #32 ENSNSUG00000010587 #33 ENSNSUG00000010589 ENSNSUG00000010590 ENSNSUG00000010591 ENSNSUG00000010594 ENSNSUG00000010612 #34 Eastern brown snake MODERN SPECIES 6 CCNG1 (ENSPTXG00000007977) GABRG2 (ENSPTXG00000007952) GABRA1 (ENSPTXG00000007948) GABRB2 (ENSPTXG00000007944) ENSPTXG00000007941 ATP10B (ENSPTXG00000007936) ENSPTXG00000007926 SLU7 (ENSPTXG00000007924) C1QTNF2 (ENSPTXG00000007923) CCNJL (ENSPTXG00000007921) FABP6 (ENSPTXG00000007917) PWWP2A (ENSPTXG00000007913) TTC1 (ENSPTXG00000007912) ENSPTXG00000007911 #19 RNASEH2A (ENSPTXG00000007909) #20 PRDX2 (ENSPTXG00000007908) #22 JUNB (ENSPTXG00000007907) #23 HOOK2 (ENSPTXG00000007904) #24 BEST2 (ENSPTXG00000007902) #25 GET3 (ENSPTXG00000007901) #26 TRIR (ENSPTXG00000007900) #27 ENSPTXG00000007898 TNPO2 (ENSPTXG00000007892) #28 FBXW9 (ENSPTXG00000007888) #29 WDR83 (ENSPTXG00000007886) #32 WDR83OS (ENSPTXG00000007885) #33 IER2 (ENSPTXG00000007884) ENSPTXG00000007883 STX10 (ENSPTXG00000007882) NACC1 (ENSPTXG00000007881) TRMT1 (ENSPTXG00000007880) Blue-lipped sea krait MODERN SPECIES 10979 PRDX2 (ENSLLTG00000006771) #22 Indian cobra MODERN SPECIES 1 CCNG1 (ENSNNAG00000002660) GABRG2 (ENSNNAG00000002724) GABRA1 (ENSNNAG00000002866) GABRB2 (ENSNNAG00000002885) ENSNNAG00000002906 ATP10B (ENSNNAG00000002917) ENSNNAG00000002934 SLU7 (ENSNNAG00000002946) C1QTNF2 (ENSNNAG00000002961) ENSNNAG00000002969 CCNJL (ENSNNAG00000002979) FABP6 (ENSNNAG00000002991) PWWP2A (ENSNNAG00000003001) TTC1 (ENSNNAG00000003009) RNASEH2A (ENSNNAG00000003023) #20 PRDX2 (ENSNNAG00000003037) #22 JUNB (ENSNNAG00000003045) #23 HOOK2 (ENSNNAG00000003053) #24 BEST2 (ENSNNAG00000003074) #25 GET3 (ENSNNAG00000003094) #26 TRIR (ENSNNAG00000003106) #27 ENSNNAG00000003114 TNPO2 (ENSNNAG00000003146) #28 FBXW9 (ENSNNAG00000003236) #29 WDR83 (ENSNNAG00000003258) #32 WDR83OS (ENSNNAG00000003263) #33 IER2 (ENSNNAG00000003270) STX10 (ENSNNAG00000003280) NACC1 (ENSNNAG00000003310) TRMT1 (ENSNNAG00000003347) MAN2B1 (ENSNNAG00000003915) #34 Lizard MODERN SPECIES 900 ENSACAG00000036703 ATP10B (ENSACAG00000006180) ENSACAG00000041795 pttg1 (ENSACAG00000038565) SLU7 (ENSACAG00000003144) C1QTNF2 (ENSACAG00000003238) CCNJL (ENSACAG00000003244) FABP6 (ENSACAG00000003260) PWWP2A (ENSACAG00000003282) ENSACAG00000041562 ENSACAG00000034730 ENSACAG00000013645 #19 RNASEH2A (ENSACAG00000003338) #20 PRDX2 (ENSACAG00000003382) #22 JUNB (ENSACAG00000022758) #23 HOOK2 (ENSACAG00000003428) #24 BEST2 (ENSACAG00000003499) #25 GET3 (ENSACAG00000025550) #26 TRIR (ENSACAG00000003556) #27 ENSACAG00000003560 TNPO2 (ENSACAG00000003576) #28 FBXW9 (ENSACAG00000003732) #29 WDR83 (ENSACAG00000003772) #32 WDR83OS (ENSACAG00000003794) #33 IER2 (ENSACAG00000041275) STX10 (ENSACAG00000003807) NACC1 (ENSACAG00000003808) TRMT1 (ENSACAG00000003825) ENSACAG00000003913 #34 Laterata ANCESTRAL SPECIES 1 ENSGT00390000001644 ENSGT00940000154726 ENSGT00940000156685 ENSGT00940000159136 ENSGT00940000156722 ENSGT00940000154245.A ENSGT00940000159531 ENSGT00390000009693 ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT00900000141021.b.b.d ENSGT00940000163101 ENSGT00940000159327 ENSGT00530000063646.b ENSGT01030000234638.b.a.a #34 Argentine black and white tegu MODERN SPECIES 1 GABRG2 (ENSSMRG00000003620) GABRA1 (ENSSMRG00000003623) GABRA6 (ENSSMRG00000003628) GABRB2 (ENSSMRG00000003635) ENSSMRG00000003642 ATP10B (ENSSMRG00000003645) ENSSMRG00000004264 SLU7 (ENSSMRG00000004269) C1QTNF2 (ENSSMRG00000004274) CCNJL (ENSSMRG00000004294) FABP6 (ENSSMRG00000004297) PWWP2A (ENSSMRG00000004300) TTC1 (ENSSMRG00000004302) ENSSMRG00000004305 #19 RNASEH2A (ENSSMRG00000004307) #20 PRDX2 (ENSSMRG00000004309) #22 JUNB (ENSSMRG00000004310) #23 HOOK2 (ENSSMRG00000004311) #24 BEST2 (ENSSMRG00000004322) #25 GET3 (ENSSMRG00000004333) #26 TRIR (ENSSMRG00000004338) #27 ENSSMRG00000004342 TNPO2 (ENSSMRG00000004344) #28 FBXW9 (ENSSMRG00000004357) #29 WDR83 (ENSSMRG00000004361) #32 WDR83OS (ENSSMRG00000004362) #33 IER2 (ENSSMRG00000004370) STX10 (ENSSMRG00000004371) NACC1 (ENSSMRG00000004373) TRMT1 (ENSSMRG00000004401) MAN2B1 (ENSSMRG00000004416) #34 Common wall lizard MODERN SPECIES 10 GABRG2 (ENSPMRG00000011060) GABRA1 (ENSPMRG00000011054) GABRA6 (ENSPMRG00000011045) GABRB2 (ENSPMRG00000011033) ATP10B (ENSPMRG00000010905) ENSPMRG00000010883 SLU7 (ENSPMRG00000010877) C1QTNF2 (ENSPMRG00000010872) CCNJL (ENSPMRG00000010868) FABP6 (ENSPMRG00000010865) ENSPMRG00000010862 PWWP2A (ENSPMRG00000010860) TTC1 (ENSPMRG00000010829) ENSPMRG00000010809 #19 RNASEH2A (ENSPMRG00000010800) #20 PRDX2 (ENSPMRG00000010782) #22 ENSPMRG00000010777 JUNB (ENSPMRG00000010774) #23 HOOK2 (ENSPMRG00000010757) #24 BEST2 (ENSPMRG00000010746) #25 GET3 (ENSPMRG00000010741) #26 TRIR (ENSPMRG00000010734) #27 ENSPMRG00000010732 TNPO2 (ENSPMRG00000010718) #28 FBXW9 (ENSPMRG00000010713) #29 WDR83 (ENSPMRG00000010708) #32 ENSPMRG00000010703 #33 IER2 (ENSPMRG00000010701) STX10 (ENSPMRG00000010697) NACC1 (ENSPMRG00000010691) TRMT1 (ENSPMRG00000010678) tuatara MODERN SPECIES 285 ACP5 (ENSSPUG00000015275) ENSSPUG00000015395 CNN1 (ENSSPUG00000015411) ENSSPUG00000015420 PRDX2 (ENSSPUG00000015434) #22 JUNB (ENSSPUG00000015461) #23 Anura ANCESTRAL SPECIES 6 ENSGT00390000008086 ENSGT00940000155505.a ENSGT00940000163316.c ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 ENSGT00530000063790.a ENSGT00530000063632.A ENSGT00940000158851 ENSGT00940000156259.b ENSGT00940000155705.b ENSGT00950000183144.B #19 ENSGT00390000010768 #20 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000163721 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00530000063646.b ENSGT00940000159327 ENSGT00940000163101 Frog MODERN SPECIES 3 ENSXETG00000045037 ENSXETG00000042146 ENSXETG00000037581 rab3d (ENSXETG00000027219) plppr2 (ENSXETG00000007925) swsap1 (ENSXETG00000032165) epor (ENSXETG00000007924) dnase2 (ENSXETG00000007923) #17 thibz (ENSXETG00000007922) ENSXETG00000040763 mast1 (ENSXETG00000004760) #18 ENSXETG00000044297 ENSXETG00000043080 rtbdn (ENSXETG00000004761) #19 rnaseh2a (ENSXETG00000004762) #20 prdx2 (ENSXETG00000004763) #22 junb (ENSXETG00000034515) #23 hook2 (ENSXETG00000004765) #24 best2 (ENSXETG00000025368) #25 get3 (ENSXETG00000004767) #26 trir (ENSXETG00000004768) #27 rnf11.2 (ENSXETG00000004769) tnpo2 (ENSXETG00000004771) #28 fbxw9 (ENSXETG00000004770) #29 dhps (ENSXETG00000005599) #31 wdr83 (ENSXETG00000005598) #32 wdr83os (ENSXETG00000025826) #33 man2b1 (ENSXETG00000005597) #34 trmt1 (ENSXETG00000033863) nacc1 (ENSXETG00000005594) stx10 (ENSXETG00000005589)