Euarchontoglires ANCESTRAL SPECIES 18 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00950000185200 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00950000182755.b.a.a.a.a.a.a.a.b ENSGT00950000182755.b.a.a.a.a.a.a.b Euarchontoglires_A ANCESTRAL SPECIES 20 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00950000185200 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Glires ANCESTRAL SPECIES 21 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00950000185200 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Rodentia ANCESTRAL SPECIES 17 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00950000185200 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Rodentia_A ANCESTRAL SPECIES 16 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00950000185200 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Hystricomorpha ANCESTRAL SPECIES 55 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00950000185200 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.k.b ##13 ENSGT00950000182915.b.b.a.a.l #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 Hystricomorpha_a ANCESTRAL SPECIES 15 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.k.b ##13 ENSGT00950000182915.b.b.a.a.l #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 Guinea pig MODERN SPECIES 42 NACC1 (ENSCPOG00000022222) #7 TRMT1 (ENSCPOG00000011754) #8 LYL1 (ENSCPOG00000036111) #9 NFIX (ENSCPOG00000022563) #10 RAD23A (ENSCPOG00000037407) #11 GADD45GIP1 (ENSCPOG00000024072) #12 CALR (ENSCPOG00000000791) #13 FARSA (ENSCPOG00000000787) #14 ENSCPOG00000033097 #15 GCDH (ENSCPOG00000027058) #16 KLF1 (ENSCPOG00000000784) #17 DNASE2 (ENSCPOG00000000783) #18 MAST1 (ENSCPOG00000000777) #19 RTBDN (ENSCPOG00000000774) #20 RNASEH2A (ENSCPOG00000038877) #21 PRDX2 (ENSCPOG00000023583) #22 JUNB (ENSCPOG00000020703) #23 HOOK2 (ENSCPOG00000000771) #24 BEST2 (ENSCPOG00000000768) #25 GET3 (ENSCPOG00000026971) #26 TRIR (ENSCPOG00000003765) #27 TNPO2 (ENSCPOG00000007033) #28 FBXW9 (ENSCPOG00000007026) #29 ENSCPOG00000033374 #30 DHPS (ENSCPOG00000002309) #31 WDR83 (ENSCPOG00000002306) #32 WDR83OS (ENSCPOG00000022365) #33 MAN2B1 (ENSCPOG00000002295) #34 ENSCPOG00000023273 #35 ENSCPOG00000027337 #36 ENSCPOG00000023880 #37 Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a.k.b ##13 ENSGT00950000182915.b.b.a.a.l #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00390000003094 ENSGT00660000095541.a.a ENSGT00390000013968 Degu MODERN SPECIES 114 LYL1 (ENSODEG00000010992) #9 NFIX (ENSODEG00000010171) #10 ENSODEG00000010129 GADD45GIP1 (ENSODEG00000010728) #12 RAD23A (ENSODEG00000011287) #11 CALR (ENSODEG00000010711) ##13 FARSA (ENSODEG00000010433) #14 ENSODEG00000010928 #15 GCDH (ENSODEG00000010247) #16 KLF1 (ENSODEG00000009692) #17 DNASE2 (ENSODEG00000009845) #18 ENSODEG00000011144 #19 ENSODEG00000012916 RTBDN (ENSODEG00000011942) #20 RNASEH2A (ENSODEG00000009772) #21 PRDX2 (ENSODEG00000009999) #22 JUNB (ENSODEG00000019944) #23 HOOK2 (ENSODEG00000011305) #24 BEST2 (ENSODEG00000010248) #25 GET3 (ENSODEG00000010662) #26 TRIR (ENSODEG00000010879) #27 TNPO2 (ENSODEG00000009670) #28 FBXW9 (ENSODEG00000010372) #29 ENSODEG00000013891 #30 ENSODEG00000011490 DHPS (ENSODEG00000010756) #31 WDR83 (ENSODEG00000010258) #32 WDR83OS (ENSODEG00000011674) #33 MAN2B1 (ENSODEG00000010434) #34 ENSODEG00000012183 ENSODEG00000012295 Long-tailed chinchilla MODERN SPECIES 122 TRMT1 (ENSCLAG00000015295) #8 LYL1 (ENSCLAG00000014483) #9 NFIX (ENSCLAG00000013479) #10 DAND5 (ENSCLAG00000011402) GADD45GIP1 (ENSCLAG00000015799) #12 RAD23A (ENSCLAG00000016638) #11 CALR (ENSCLAG00000012923) #13 FARSA (ENSCLAG00000015489) #14 SYCE2 (ENSCLAG00000014420) #15 GCDH (ENSCLAG00000015590) #16 KLF1 (ENSCLAG00000013218) #17 DNASE2 (ENSCLAG00000012983) #18 MAST1 (ENSCLAG00000012224) #19 RTBDN (ENSCLAG00000014391) #20 RNASEH2A (ENSCLAG00000014930) #21 PRDX2 (ENSCLAG00000013924) #22 JUNB (ENSCLAG00000018028) #23 HOOK2 (ENSCLAG00000012972) #24 BEST2 (ENSCLAG00000012820) #25 GET3 (ENSCLAG00000011393) #26 TRIR (ENSCLAG00000011164) #27 TNPO2 (ENSCLAG00000013442) #28 ENSCLAG00000011841 #30 FBXW9 (ENSCLAG00000012587) #29 DHPS (ENSCLAG00000012256) #31 WDR83 (ENSCLAG00000012198) #32 ENSCLAG00000011821 #33 MAN2B1 (ENSCLAG00000013086) #34 ZNF333 (ENSCLAG00000014959) NANP (ENSCLAG00000014668) NINL (ENSCLAG00000011605) Sciuridae ANCESTRAL SPECIES 20 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Eurasian red squirrel MODERN SPECIES 7 LYL1 (ENSSVLG00005018485) #9 NFIX (ENSSVLG00005018211) #10 DAND5 (ENSSVLG00005018136) GADD45GIP1 (ENSSVLG00005018098) #12 RAD23A (ENSSVLG00005018009) #11 CALR (ENSSVLG00005017951) #13 FARSA (ENSSVLG00005017880) #14 ENSSVLG00005017827 #15 GCDH (ENSSVLG00005017674) #16 KLF1 (ENSSVLG00005017619) #17 DNASE2 (ENSSVLG00005017585) #18 MAST1 (ENSSVLG00005017111) #19 RTBDN (ENSSVLG00005016997) #20 RNASEH2A (ENSSVLG00005016950) #21 THSD8 (ENSSVLG00005016905) PRDX2 (ENSSVLG00005016837) #22 JUNB (ENSSVLG00005025317) #23 HOOK2 (ENSSVLG00005025297) #24 BEST2 (ENSSVLG00005025274) #25 ENSSVLG00005025252 #26 TRIR (ENSSVLG00005025236) #27 TNPO2 (ENSSVLG00005025206) #28 FBXW9 (ENSSVLG00005025161) #29 ENSSVLG00005025134 #30 DHPS (ENSSVLG00005025110) #31 ENSSVLG00005025092 #32 ENSSVLG00005025070 #33 ENSSVLG00005025050 #34 ENSSVLG00005025025 ENSSVLG00005025001 ENSSVLG00005024969 Marmotini ANCESTRAL SPECIES 41 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 24 LYL1 (ENSMMMG00000021069) #9 NFIX (ENSMMMG00000021044) #10 DAND5 (ENSMMMG00000021038) GADD45GIP1 (ENSMMMG00000021032) #12 ENSMMMG00000021016 #11 CALR (ENSMMMG00000021010) #13 FARSA (ENSMMMG00000020996) #14 SYCE2 (ENSMMMG00000020981) #15 GCDH (ENSMMMG00000020963) #16 KLF1 (ENSMMMG00000020960) #17 DNASE2 (ENSMMMG00000020947) #18 MAST1 (ENSMMMG00000020911) #19 RTBDN (ENSMMMG00000020903) #20 RNASEH2A (ENSMMMG00000020879) #21 THSD8 (ENSMMMG00000020877) ENSMMMG00000020873 #22 JUNB (ENSMMMG00000020869) #23 HOOK2 (ENSMMMG00000020811) #24 BEST2 (ENSMMMG00000020790) #25 GET3 (ENSMMMG00000020781) #26 TRIR (ENSMMMG00000020777) #27 TNPO2 (ENSMMMG00000020726) #28 FBXW9 (ENSMMMG00000020717) #29 ENSMMMG00000020713 #30 DHPS (ENSMMMG00000020706) #31 WDR83 (ENSMMMG00000020697) #32 WDR83OS (ENSMMMG00000020687) #33 MAN2B1 (ENSMMMG00000020653) #34 ENSMMMG00000020633 ENSMMMG00000020539 ACP5 (ENSMMMG00000020512) Alpin marmot MODERN SPECIES 94 ENSMMMG00000023507 ENSMMMG00000023510 ENSMMMG00000023512 ENSMMMG00000023513 ENSMMMG00000023515 DEFB1 (ENSMMMG00000023517) XKR5 (ENSMMMG00000023518) AGPAT5 (ENSMMMG00000023520) MCPH1 (ENSMMMG00000023526) ANGPT2 (ENSMMMG00000023533) CSMD1 (ENSMMMG00000023540) MYOM2 (ENSMMMG00000023553) ARHGEF10 (ENSMMMG00000023568) CLN8 (ENSMMMG00000023580) DLGAP2 (ENSMMMG00000023583) ENSMMMG00000023607 #22 ENSMMMG00000023609 TDRP (ENSMMMG00000023610) FBXO25 (ENSMMMG00000023611) Marmotini_b ANCESTRAL SPECIES 40 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.b ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00390000016735 Squirrel DUPLICATION Squirrel MODERN SPECIES 259 TRMT1 (ENSSTOG00000012531) #8 LYL1 (ENSSTOG00000028401) #9 NFIX (ENSSTOG00000007848) #10 DAND5 (ENSSTOG00000016420) GADD45GIP1 (ENSSTOG00000016419) #12 RAD23A (ENSSTOG00000024117) #11 CALR (ENSSTOG00000008774) #13 FARSA (ENSSTOG00000008748) #14 SYCE2 (ENSSTOG00000008737) #15 GCDH (ENSSTOG00000008724) #16 KLF1 (ENSSTOG00000021956) #17 DNASE2 (ENSSTOG00000008712) #18 MAST1 (ENSSTOG00000008668) #19 Rtbdn (ENSSTOG00000006228) #20 RNASEH2A (ENSSTOG00000006224) #21 ENSSTOG00000025862 #22 JUNB (ENSSTOG00000031929) #23 HOOK2 (ENSSTOG00000011709) #24 BEST2 (ENSSTOG00000019471) #25 GET3 (ENSSTOG00000006992) #26 TRIR (ENSSTOG00000006978) #27 TNPO2 (ENSSTOG00000006952) #28 FBXW9 (ENSSTOG00000006921) #29 ENSSTOG00000030269 #30 DHPS (ENSSTOG00000006900) #31 WDR83 (ENSSTOG00000006883) #32 WDR83OS (ENSSTOG00000006874) #33 MAN2B1 (ENSSTOG00000029598) #34 ENSSTOG00000034910 ZNF709 (ENSSTOG00000029196) ACP5 (ENSSTOG00000003699) Squirrel MODERN SPECIES 122 NDC1 (ENSSTOG00000002596) GLIS1 (ENSSTOG00000024363) DMRTB1 (ENSSTOG00000007187) ENSSTOG00000020556 LRP8 (ENSSTOG00000001256) MAGOH (ENSSTOG00000001253) CPT2 (ENSSTOG00000016415) SLC1A7 (ENSSTOG00000020054) PODN (ENSSTOG00000010433) SCP2 (ENSSTOG00000022003) ECHDC2 (ENSSTOG00000010402) ZYG11A (ENSSTOG00000021997) ZYG11B (ENSSTOG00000008067) COA7 (ENSSTOG00000008063) SHISAL2A (ENSSTOG00000026416) ENSSTOG00000023745 #22 GPX7 (ENSSTOG00000023247) TUT4 (ENSSTOG00000015611) PRPF38A (ENSSTOG00000015610) ORC1 (ENSSTOG00000015591) CC2D1B (ENSSTOG00000015584) ZFYVE9 (ENSSTOG00000026884) ENSSTOG00000025134 BTF3L4 (ENSSTOG00000006129) TXNDC12 (ENSSTOG00000006093) ENSSTOG00000032439 RAB3B (ENSSTOG00000016470) NRDC (ENSSTOG00000000706) ENSSTOG00000000692 ENSSTOG00000022882 ##13 ENSSTOG00000023598 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 217 ENSUPAG00010008329 NFIX (ENSUPAG00010008230) #10 DAND5 (ENSUPAG00010008227) GADD45GIP1 (ENSUPAG00010008222) #12 RAD23A (ENSUPAG00010008197) #11 CALR (ENSUPAG00010008184) #13 FARSA (ENSUPAG00010008158) #14 SYCE2 (ENSUPAG00010008135) #15 GCDH (ENSUPAG00010008102) #16 KLF1 (ENSUPAG00010008092) #17 DNASE2 (ENSUPAG00010008053) #18 MAST1 (ENSUPAG00010007994) #19 RTBDN (ENSUPAG00010007981) #20 RNASEH2A (ENSUPAG00010007909) #21 THSD8 (ENSUPAG00010007901) ENSUPAG00010007882 #22 JUNB (ENSUPAG00010007878) #23 HOOK2 (ENSUPAG00010007823) #24 BEST2 (ENSUPAG00010007798) #25 GET3 (ENSUPAG00010007783) #26 TRIR (ENSUPAG00010007779) #27 TNPO2 (ENSUPAG00010007721) #28 FBXW9 (ENSUPAG00010007705) #29 ENSUPAG00010007702 #30 DHPS (ENSUPAG00010007686) #31 WDR83 (ENSUPAG00010007673) #32 WDR83OS (ENSUPAG00010007669) #33 MAN2B1 (ENSUPAG00010007651) #34 ENSUPAG00010007643 ENSUPAG00010007642 ENSUPAG00010007638 Arctic ground squirrel MODERN SPECIES 21 GLIS1 (ENSUPAG00010021514) DMRTB1 (ENSUPAG00010021527) ENSUPAG00010021531 LRP8 (ENSUPAG00010021536) MAGOH (ENSUPAG00010021633) CZIB (ENSUPAG00010021635) CPT2 (ENSUPAG00010021639) SLC1A7 (ENSUPAG00010021645) PODN (ENSUPAG00010021656) SCP2 (ENSUPAG00010021667) ECHDC2 (ENSUPAG00010021676) ZYG11A (ENSUPAG00010021681) ZYG11B (ENSUPAG00010021696) COA7 (ENSUPAG00010021697) SHISAL2A (ENSUPAG00010021700) ENSUPAG00010021701 #22 GPX7 (ENSUPAG00010021704) TUT4 (ENSUPAG00010021705) PRPF38A (ENSUPAG00010021729) ORC1 (ENSUPAG00010021734) CC2D1B (ENSUPAG00010021747) ZFYVE9 (ENSUPAG00010021759) ENSUPAG00010021795 BTF3L4 (ENSUPAG00010021796) TXNDC12 (ENSUPAG00010021798) RAB3B (ENSUPAG00010021800) NRDC (ENSUPAG00010021802) ENSUPAG00010021819 ENSUPAG00010022352 ##13 EPS15 (ENSUPAG00010022360) TTC39A (ENSUPAG00010022367) Rodentia_B ANCESTRAL SPECIES 43 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Kangaroo rat MODERN SPECIES 502 Cacna1a (ENSDORG00000010862) Nacc1 (ENSDORG00000003988) #7 Trmt1 (ENSDORG00000014298) #8 Lyl1 (ENSDORG00000029482) #9 Nfix (ENSDORG00000012235) #10 Dand5 (ENSDORG00000007059) Rad23a (ENSDORG00000010116) #11 Calr (ENSDORG00000010117) #13 Farsa (ENSDORG00000010118) #14 Syce2 (ENSDORG00000009022) #15 Gcdh (ENSDORG00000009020) #16 Klf1 (ENSDORG00000009018) #17 Dnase2a (ENSDORG00000009016) #18 ENSDORG00000009013 #19 Rnaseh2a (ENSDORG00000009008) #21 Prdx2 (ENSDORG00000009005) #22 Hook2 (ENSDORG00000015001) #24 Best2 (ENSDORG00000015000) #25 Get3 (ENSDORG00000014999) #26 Trir (ENSDORG00000014997) #27 Tnpo2 (ENSDORG00000014993) #28 Fbxw9 (ENSDORG00000014991) #29 Gng14 (ENSDORG00000027251) #30 ENSDORG00000014791 #31 Wdr83 (ENSDORG00000014787) #32 Wdr83os (ENSDORG00000025155) #33 ENSDORG00000028802 #34 Myomorpha ANCESTRAL SPECIES 52 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 234 ENSJJAG00000012119 Nacc1 (ENSJJAG00000000199) #7 Trmt1 (ENSJJAG00000017154) #8 Lyl1 (ENSJJAG00000015977) #9 Nfix (ENSJJAG00000012047) #10 Dand5 (ENSJJAG00000011222) Rad23a (ENSJJAG00000000606) #11 Calr (ENSJJAG00000000115) #13 Syce2 (ENSJJAG00000021380) #15 Gcdh (ENSJJAG00000018993) #16 Klf1 (ENSJJAG00000004209) #17 Dnase2a (ENSJJAG00000000087) #18 ENSJJAG00000020016 #19 ENSJJAG00000019577 Rnaseh2a (ENSJJAG00000017547) #21 ENSJJAG00000016489 #22 Junb (ENSJJAG00000012180) #23 Hook2 (ENSJJAG00000015256) #24 Best2 (ENSJJAG00000018238) #25 Get3 (ENSJJAG00000017121) #26 Trir (ENSJJAG00000016895) #27 Tnpo2 (ENSJJAG00000016820) #28 Fbxw9 (ENSJJAG00000019917) #29 Gng14 (ENSJJAG00000019778) #30 ENSJJAG00000019277 #31 Wdr83 (ENSJJAG00000015218) #32 Wdr83os (ENSJJAG00000020904) #33 ENSJJAG00000020733 #34 Lesser Egyptian jerboa MODERN SPECIES 51 Susd4 (ENSJJAG00000017970) Disp1 (ENSJJAG00000015868) Brox (ENSJJAG00000007298) Aida (ENSJJAG00000023815) ENSJJAG00000022254 Taf1a (ENSJJAG00000006299) Ptchd3 (ENSJJAG00000024292) ENSJJAG00000012961 Cr1l (ENSJJAG00000022966) ENSJJAG00000010379 ENSJJAG00000013299 Cd34 (ENSJJAG00000020811) Plxna2 (ENSJJAG00000017523) Camk1g (ENSJJAG00000006575) Lamb3 (ENSJJAG00000019254) ENSJJAG00000002823 #22 Hsd11b1 (ENSJJAG00000012713) ENSJJAG00000024101 ENSJJAG00000008116 A130010J15Rik (ENSJJAG00000009624) Irf6 (ENSJJAG00000023787) Utp25 (ENSJJAG00000024257) Syt14 (ENSJJAG00000020007) ENSJJAG00000015432 Hhat (ENSJJAG00000018726) Kcnh1 (ENSJJAG00000012317) Rcor3 (ENSJJAG00000013481) Traf5 (ENSJJAG00000023614) Muroidea ANCESTRAL SPECIES 60 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Upper Galilee mountains blind mole rat MODERN SPECIES 1738 Trmt1 (ENSNGAG00000022486) #8 Lyl1 (ENSNGAG00000014673) #9 Nfix (ENSNGAG00000016724) #10 Dand5 (ENSNGAG00000021187) Gadd45gip1 (ENSNGAG00000022030) #12 Rad23a (ENSNGAG00000022186) #11 Calr (ENSNGAG00000011286) #13 Farsa (ENSNGAG00000018353) #14 Syce2 (ENSNGAG00000023150) #15 Gcdh (ENSNGAG00000022070) #16 Klf1 (ENSNGAG00000022931) #17 Dnase2a (ENSNGAG00000022792) #18 Mast1 (ENSNGAG00000002377) #19 Rtbdn (ENSNGAG00000011358) #20 Rnaseh2a (ENSNGAG00000017988) #21 Prdx2 (ENSNGAG00000022496) #22 Junb (ENSNGAG00000006939) #23 Hook2 (ENSNGAG00000022705) #24 Best2 (ENSNGAG00000014058) #25 Get3 (ENSNGAG00000015555) #26 Trir (ENSNGAG00000017973) #27 Tnpo2 (ENSNGAG00000000650) #28 ENSNGAG00000017579 #29 Gng14 (ENSNGAG00000018951) #30 ENSNGAG00000008057 #31 Wdr83 (ENSNGAG00000001041) #32 Wdr83os (ENSNGAG00000022509) #33 ENSNGAG00000022764 #34 ENSNGAG00000005762 ENSNGAG00000020517 Muroidea_A ANCESTRAL SPECIES 16 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164424 ENSGT00390000007315 Cricetidae ANCESTRAL SPECIES 7 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00940000164424 ENSGT00390000007315 ENSGT00390000007370 Cricetinae ANCESTRAL SPECIES 40 ENSGT00940000159327 #7 ENSGT00530000063646.b #8 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00390000010768 #21 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 Golden Hamster MODERN SPECIES 877 Cacna1a (ENSMAUG00000008037) Nacc1 (ENSMAUG00000004663) #7 Trmt1 (ENSMAUG00000011134) #8 Nfix (ENSMAUG00000018106) #10 Dand5 (ENSMAUG00000020203) Gadd45gip1 (ENSMAUG00000001145) #12 Rad23a (ENSMAUG00000009327) #11 Farsa (ENSMAUG00000009188) #14 ENSMAUG00000000609 Syce2 (ENSMAUG00000015586) #15 Gcdh (ENSMAUG00000012276) #16 Klf1 (ENSMAUG00000021937) #17 Dnase2a (ENSMAUG00000012610) #18 Mast1 (ENSMAUG00000001337) #19 ENSMAUG00000021740 #21 Prdx2 (ENSMAUG00000005262) #22 Junb (ENSMAUG00000004233) #23 Hook2 (ENSMAUG00000013561) #24 Best2 (ENSMAUG00000010704) #25 Trir (ENSMAUG00000019320) #27 ENSMAUG00000007313 #28 Fbxw9 (ENSMAUG00000020565) #29 Gng14 (ENSMAUG00000001143) #30 Dhps (ENSMAUG00000001398) #31 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 347 Nacc1 (ENSCGRG00001016498) #7 Trmt1 (ENSCGRG00001022594) #8 Lyl1 (ENSCGRG00001020161) #9 Nfix (ENSCGRG00001013186) #10 Dand5 (ENSCGRG00001000588) Gadd45gip1 (ENSCGRG00001000298) #12 Rad23a (ENSCGRG00001020853) #11 Calr (ENSCGRG00001020181) #13 Farsa (ENSCGRG00001019769) #14 Syce2 (ENSCGRG00001013520) #15 Gcdh (ENSCGRG00001012582) #16 Klf1 (ENSCGRG00001011893) #17 Dnase2a (ENSCGRG00001011489) #18 Mast1 (ENSCGRG00001012818) #19 Rnaseh2a (ENSCGRG00001005021) #21 PRDX2 (ENSCGRG00001001765) #22 Junb (ENSCGRG00001015135) #23 Hook2 (ENSCGRG00001021145) #24 Best2 (ENSCGRG00001016555) #25 ASNA1 (ENSCGRG00001015158) #26 Trir (ENSCGRG00001014029) #27 Tnpo2 (ENSCGRG00001015917) #28 Fbxw9 (ENSCGRG00001014378) #29 Gng14 (ENSCGRG00001013712) #30 Dhps (ENSCGRG00001013178) #31 Wdr83 (ENSCGRG00001012536) #32 Wdr83os (ENSCGRG00001011873) #33 Man2b1 (ENSCGRG00001022182) #34 ENSCGRG00001021004 ENSCGRG00001020030 Chinese hamster chok1gshd MODERN SPECIES 1 Zmat4 (ENSCGRG00001016583) Sfrp1 (ENSCGRG00001017613) ENSCGRG00001020215 Gins4 (ENSCGRG00001016717) Gpat4 (ENSCGRG00001017830) Nkx6-3 (ENSCGRG00001018532) Ank1 (ENSCGRG00001021732) Kat6a (ENSCGRG00001019602) Ap3m2 (ENSCGRG00001020086) Plat (ENSCGRG00001021037) Ikbkb (ENSCGRG00001017718) Polb (ENSCGRG00001018504) Dkk4 (ENSCGRG00001018975) ENSCGRG00001019651 Slc20a2 (ENSCGRG00001007297) ENSCGRG00001008544 #22 Smim19 (ENSCGRG00001013840) Mrps31 (ENSCGRG00001014160) ENSCGRG00001004965 ENSCGRG00001015230 Tpte (ENSCGRG00001016028) Thsd1 (ENSCGRG00001021322) Vps36 (ENSCGRG00001022167) Ckap2 (ENSCGRG00001023062) Nek3 (ENSCGRG00001004635) Nek5 (ENSCGRG00001024708) ENSCGRG00001023830 Atp7b (ENSCGRG00001019712) Ccdc70 (ENSCGRG00001005698) Atg5 (ENSCGRG00001022743) Prdm1 (ENSCGRG00001023291) Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00940000164424 ENSGT00390000007315 ENSGT00390000007370 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 98 Cd209a (ENSMOCG00000013815) Clec4g (ENSMOCG00000007606) ENSMOCG00000009634 Dand5 (ENSMOCG00000006477) Gadd45gip1 (ENSMOCG00000017223) #12 Rad23a (ENSMOCG00000008410) #11 Calr (ENSMOCG00000003128) #13 Farsa (ENSMOCG00000011399) #14 Syce2 (ENSMOCG00000016839) #15 Gcdh (ENSMOCG00000005123) #16 Klf1 (ENSMOCG00000015689) #17 Dnase2a (ENSMOCG00000001379) #18 Mast1 (ENSMOCG00000015813) #19 Rtbdn (ENSMOCG00000002540) #20 Rnaseh2a (ENSMOCG00000017408) #21 ENSMOCG00000020752 #22 Junb (ENSMOCG00000003238) #23 Hook2 (ENSMOCG00000014258) #24 Best2 (ENSMOCG00000006958) #25 Get3 (ENSMOCG00000002658) #26 Trir (ENSMOCG00000009371) #27 Tnpo2 (ENSMOCG00000016489) #28 ENSMOCG00000003557 #29 Gng14 (ENSMOCG00000002530) #30 Dhps (ENSMOCG00000020268) #31 Wdr83 (ENSMOCG00000015572) #32 Wdr83os (ENSMOCG00000000084) #33 Man2b1 (ENSMOCG00000019337) #34 ENSMOCG00000006321 Vps35 (ENSMOCG00000002997) Orc6 (ENSMOCG00000020756) Prairie vole MODERN SPECIES 15 Gosr1 (ENSMOCG00000011008) Cpd (ENSMOCG00000011977) ENSMOCG00000008686 Blmh (ENSMOCG00000007175) Slc6a4 (ENSMOCG00000004407) Nsrp1 (ENSMOCG00000019716) ENSMOCG00000016597 Efcab5 (ENSMOCG00000006093) ENSMOCG00000006899 Coro6 (ENSMOCG00000013111) Ankrd13b (ENSMOCG00000008806) Git1 (ENSMOCG00000011144) Trp53i13 (ENSMOCG00000006130) ENSMOCG00000012497 Abhd15 (ENSMOCG00000020292) ENSMOCG00000002833 #22 Taok1 (ENSMOCG00000007289) Nufip2 (ENSMOCG00000022086) Cryba1 (ENSMOCG00000009961) ENSMOCG00000002378 Myo18a (ENSMOCG00000022942) Pipox (ENSMOCG00000020266) Sez6 (ENSMOCG00000022144) Phf12 (ENSMOCG00000009540) Dhrs13 (ENSMOCG00000003764) Flot2 (ENSMOCG00000002050) Eral1 (ENSMOCG00000022786) Fam222b (ENSMOCG00000002697) Traf4 (ENSMOCG00000022716) Nek8 (ENSMOCG00000005323) Tlcd1 (ENSMOCG00000022875) Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000029305 Nfix (ENSPEMG00000011765) #10 Dand5 (ENSPEMG00000017061) Gadd45gip1 (ENSPEMG00000011904) #12 Rad23a (ENSPEMG00000006140) #11 Calr (ENSPEMG00000001949) #13 Farsa (ENSPEMG00000012560) #14 Syce2 (ENSPEMG00000016357) #15 Gcdh (ENSPEMG00000009103) #16 Klf1 (ENSPEMG00000017635) #17 Dnase2a (ENSPEMG00000000677) #18 Mast1 (ENSPEMG00000010588) #19 Rtbdn (ENSPEMG00000024999) #20 Rnaseh2a (ENSPEMG00000018009) #21 Gm49661 (ENSPEMG00000029668) Prdx2 (ENSPEMG00000000538) #22 Junb (ENSPEMG00000006961) #23 Hook2 (ENSPEMG00000009962) #24 Best2 (ENSPEMG00000015867) #25 Get3 (ENSPEMG00000016543) #26 Trir (ENSPEMG00000016449) #27 Tnpo2 (ENSPEMG00000018702) #28 Fbxw9 (ENSPEMG00000017063) #29 Gng14 (ENSPEMG00000029438) #30 Dhps (ENSPEMG00000019124) #31 Wdr83 (ENSPEMG00000014294) #32 Wdr83os (ENSPEMG00000025345) #33 ENSPEMG00000025750 ENSPEMG00000026081 ENSPEMG00000025354 Or7c19 (ENSPEMG00000024814) Murinae DUPLICATION Murinae DUPLICATION Murinae ANCESTRAL SPECIES 15 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.h #22 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164424 ENSGT00390000007315 Mus ANCESTRAL SPECIES 6 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.h #22 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164424 ENSGT00390000007315 Mus_A ANCESTRAL SPECIES 8 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164424 ENSGT00390000007315 Mus_B ANCESTRAL SPECIES 6 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164424 ENSGT00390000007315 Mouse MODERN SPECIES 17 Nfix (ENSMUSG00000001911) #10 Lyl1 (ENSMUSG00000034041) #9 Dand5 (ENSMUSG00000053226) Gadd45gip1 (ENSMUSG00000033751) #12 Rad23a (ENSMUSG00000003813) #11 Calr (ENSMUSG00000003814) #13 Farsa (ENSMUSG00000003808) #14 Syce2 (ENSMUSG00000003824) #15 Gcdh (ENSMUSG00000003809) #16 Klf1 (ENSMUSG00000054191) #17 Dnase2a (ENSMUSG00000003812) #18 Mast1 (ENSMUSG00000053693) #19 Rtbdn (ENSMUSG00000048617) #20 Rnaseh2a (ENSMUSG00000052926) #21 Gm49661 (ENSMUSG00000111184) Prdx2 (ENSMUSG00000005161) #22 Junb (ENSMUSG00000052837) #23 Hook2 (ENSMUSG00000052566) #24 Best2 (ENSMUSG00000052819) #25 Get3 (ENSMUSG00000052456) #26 Trir (ENSMUSG00000041203) #27 Tnpo2 (ENSMUSG00000031691) #28 Fbxw9 (ENSMUSG00000008167) #29 Gng14 (ENSMUSG00000095845) #30 Dhps (ENSMUSG00000060038) #31 Wdr83 (ENSMUSG00000005150) #32 Wdr83os (ENSMUSG00000059355) #33 Man2b1 (ENSMUSG00000005142) #34 Zfp791 (ENSMUSG00000074194) Cks1brt (ENSMUSG00000062687) Or7c19 (ENSMUSG00000051952) Mus_C ANCESTRAL SPECIES 5 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00940000157455.z ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.h #22 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164424 ENSGT00390000007315 Steppe mouse MODERN SPECIES 2800 Nfix (ENSMSIG00000014176) #10 Dand5 (ENSMSIG00000014166) Gadd45gip1 (ENSMSIG00000014154) #12 Rad23a (ENSMSIG00000014128) #11 ENSMSIG00000014123 #13 ENSMSIG00000014114 Farsa (ENSMSIG00000014035) #14 Syce2 (ENSMSIG00000013998) #15 Gcdh (ENSMSIG00000013969) #16 Klf1 (ENSMSIG00000013957) #17 Dnase2a (ENSMSIG00000013905) #18 ENSMSIG00000013886 #19 Rtbdn (ENSMSIG00000013845) #20 Rnaseh2a (ENSMSIG00000013788) #21 Gm49661 (ENSMSIG00000013769) Prdx2 (ENSMSIG00000013681) #22 Junb (ENSMSIG00000013671) #23 Hook2 (ENSMSIG00000013603) #24 Get3 (ENSMSIG00000013568) #26 Trir (ENSMSIG00000013540) #27 Tnpo2 (ENSMSIG00000013409) #28 Fbxw9 (ENSMSIG00000013376) #29 Gng14 (ENSMSIG00000013367) #30 Dhps (ENSMSIG00000013355) #31 Wdr83 (ENSMSIG00000013337) #32 Wdr83os (ENSMSIG00000013323) #33 Man2b1 (ENSMSIG00000013254) #34 ENSMSIG00000013245 Zfp791 (ENSMSIG00000013223) ENSMSIG00000013214 Cks1brt (ENSMSIG00000013203) Ryukyu mouse MODERN SPECIES 17 Nfix (MGP_CAROLIEiJ_G0031305) #10 Lyl1 (MGP_CAROLIEiJ_G0031306) #9 MGP_CAROLIEiJ_G0031307 Dand5 (MGP_CAROLIEiJ_G0031308) Gadd45gip1 (MGP_CAROLIEiJ_G0031309) #12 Rad23a (MGP_CAROLIEiJ_G0031310) #11 Calr (MGP_CAROLIEiJ_G0031311) #13 Farsa (MGP_CAROLIEiJ_G0031312) #14 Syce2 (MGP_CAROLIEiJ_G0031313) #15 Gcdh (MGP_CAROLIEiJ_G0031314) #16 Klf1 (MGP_CAROLIEiJ_G0031315) #17 Dnase2a (MGP_CAROLIEiJ_G0031316) #18 Mast1 (MGP_CAROLIEiJ_G0031317) #19 Rtbdn (MGP_CAROLIEiJ_G0031318) #20 MGP_CAROLIEiJ_G0031319 #21 Prdx2 (MGP_CAROLIEiJ_G0031320) #22 Junb (MGP_CAROLIEiJ_G0031321) #23 Hook2 (MGP_CAROLIEiJ_G0031322) #24 Best2 (MGP_CAROLIEiJ_G0031323) #25 Get3 (MGP_CAROLIEiJ_G0031324) #26 Trir (MGP_CAROLIEiJ_G0031325) #27 Tnpo2 (MGP_CAROLIEiJ_G0031326) #28 Fbxw9 (MGP_CAROLIEiJ_G0031327) #29 Gng14 (MGP_CAROLIEiJ_G0031328) #30 Dhps (MGP_CAROLIEiJ_G0031329) #31 Wdr83 (MGP_CAROLIEiJ_G0031330) #32 Wdr83os (MGP_CAROLIEiJ_G0031331) #33 Man2b1 (MGP_CAROLIEiJ_G0031332) #34 Zfp791 (MGP_CAROLIEiJ_G0031333) Or7c19 (MGP_CAROLIEiJ_G0031334) Vps35 (MGP_CAROLIEiJ_G0031335) Rat MODERN SPECIES 10 Trmt1 (ENSRNOG00000002914) #8 Lyl1 (ENSRNOG00000002950) #9 Nfix (ENSRNOG00000002983) #10 Dand5 (ENSRNOG00000033368) Gadd45gip1 (ENSRNOG00000003011) #12 Rad23a (ENSRNOG00000003026) #11 Calr (ENSRNOG00000003029) #13 Farsa (ENSRNOG00000003149) #14 Gcdh (ENSRNOG00000003307) #16 Klf1 (ENSRNOG00000003443) #17 Dnase2 (ENSRNOG00000023830) #18 MAST1 (ENSRNOG00000003469) #19 Rtbdn (ENSRNOG00000043215) #20 Rnaseh2a (ENSRNOG00000068063) #21 Thsd8 (ENSRNOG00000003504) Prdx2 (ENSRNOG00000003520) #22 Hook2 (ENSRNOG00000003682) #24 Best2 (ENSRNOG00000003737) #25 Get3 (ENSRNOG00000003747) #26 Trir (ENSRNOG00000003863) #27 Tnpo2 (ENSRNOG00000003970) #28 Fbxw9 (ENSRNOG00000004212) #29 Gng14 (ENSRNOG00000023899) #30 Dhps (ENSRNOG00000004219) #31 Wdr83 (ENSRNOG00000004287) #32 Man2b1 (ENSRNOG00000023910) #34 Zfp791 (ENSRNOG00000023920) LOC108348296 (ENSRNOG00000046751) ENSRNOG00000064909 LOC120098580 (ENSRNOG00000064578) ENSRNOG00000065746 Murinae ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus_A ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus_B ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Mus_C ANCESTRAL SPECIES ENSGT00940000155828.g.b #22 Steppe mouse MODERN SPECIES 2989 Cntnap5b (ENSMSIG00000024827) ENSMSIG00000024893 #22 Murinae ANCESTRAL SPECIES 15 ENSGT00940000162404 #9 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.h #22 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Mus ANCESTRAL SPECIES 6 ENSGT00940000162404 #9 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.h #22 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Shrew mouse MODERN SPECIES 12 Nacc1 (MGP_PahariEiJ_G0022909) #7 Lyl1 (MGP_PahariEiJ_G0022911) #9 Nfix (MGP_PahariEiJ_G0022912) #10 Dand5 (MGP_PahariEiJ_G0022913) Gadd45gip1 (MGP_PahariEiJ_G0022914) #12 Rad23a (MGP_PahariEiJ_G0022915) #11 Calr (MGP_PahariEiJ_G0022916) #13 Farsa (MGP_PahariEiJ_G0022917) #14 Syce2 (MGP_PahariEiJ_G0022918) #15 Gcdh (MGP_PahariEiJ_G0022919) #16 Klf1 (MGP_PahariEiJ_G0022920) #17 Dnase2a (MGP_PahariEiJ_G0022921) #18 Mast1 (MGP_PahariEiJ_G0022922) #19 MGP_PahariEiJ_G0022923 #20 Rnaseh2a (MGP_PahariEiJ_G0022924) #21 MGP_PahariEiJ_G0022925 #22 Junb (MGP_PahariEiJ_G0022926) #23 Hook2 (MGP_PahariEiJ_G0022927) #24 Best2 (MGP_PahariEiJ_G0022928) #25 Get3 (MGP_PahariEiJ_G0022929) #26 Trir (MGP_PahariEiJ_G0022930) #27 Tnpo2 (MGP_PahariEiJ_G0022931) #28 Fbxw9 (MGP_PahariEiJ_G0022932) #29 Gng14 (MGP_PahariEiJ_G0022933) #30 Dhps (MGP_PahariEiJ_G0022934) #31 Wdr83 (MGP_PahariEiJ_G0022935) #32 Man2b1 (MGP_PahariEiJ_G0022936) #34 Zfp791 (MGP_PahariEiJ_G0022937) Or7c19 (MGP_PahariEiJ_G0022938) Vps35 (MGP_PahariEiJ_G0022939) Orc6 (MGP_PahariEiJ_G0022940) Mus_A ANCESTRAL SPECIES ENSGT00940000155828.h #22 Mus_B ANCESTRAL SPECIES ENSGT00940000155828.h #22 Mus_C ANCESTRAL SPECIES 5 ENSGT00860000135639 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00940000157455.z ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856.d #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.h #22 ENSGT00870000137755 ENSGT00940000155828.g.a #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.i #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Steppe mouse MODERN SPECIES 3168 Cbln2 (ENSMSIG00000024262) Neto1 (ENSMSIG00000024230) ENSMSIG00000024214 ENSMSIG00000024189 ENSMSIG00000024186 ENSMSIG00000024175 #22 Timm21 (ENSMSIG00000024148) Fbxo15 (ENSMSIG00000024100) Cyb5a (ENSMSIG00000024084) Gm17266 (ENSMSIG00000024036) ENSMSIG00000024020 Cndp2 (ENSMSIG00000023966) spretus MODERN SPECIES 17 Lyl1 (MGP_SPRETEiJ_G0032424) #9 MGP_SPRETEiJ_G0032425 Dand5 (MGP_SPRETEiJ_G0032426) Gadd45gip1 (MGP_SPRETEiJ_G0032427) #12 Rad23a (MGP_SPRETEiJ_G0032428) #11 Calr (MGP_SPRETEiJ_G0032429) #13 MGP_SPRETEiJ_G0032430 Farsa (MGP_SPRETEiJ_G0032431) #14 Syce2 (MGP_SPRETEiJ_G0032432) #15 Gcdh (MGP_SPRETEiJ_G0032433) #16 Klf1 (MGP_SPRETEiJ_G0032434) #17 Dnase2a (MGP_SPRETEiJ_G0032435) #18 Mast1 (MGP_SPRETEiJ_G0032436) #19 Rtbdn (MGP_SPRETEiJ_G0032437) #20 Rnaseh2a (MGP_SPRETEiJ_G0032438) #21 MGP_SPRETEiJ_G0032439 #22 Junb (MGP_SPRETEiJ_G0032440) #23 Hook2 (MGP_SPRETEiJ_G0032441) #24 Best2 (MGP_SPRETEiJ_G0032442) #25 Get3 (MGP_SPRETEiJ_G0032443) #26 Trir (MGP_SPRETEiJ_G0032444) #27 Tnpo2 (MGP_SPRETEiJ_G0032445) #28 Fbxw9 (MGP_SPRETEiJ_G0032446) #29 Gng14 (MGP_SPRETEiJ_G0032447) #30 Dhps (MGP_SPRETEiJ_G0032448) #31 Wdr83 (MGP_SPRETEiJ_G0032449) #32 Wdr83os (MGP_SPRETEiJ_G0032450) #33 Man2b1 (MGP_SPRETEiJ_G0032451) #34 Zfp791 (MGP_SPRETEiJ_G0032452) Or7c19 (MGP_SPRETEiJ_G0032453) Vps35 (MGP_SPRETEiJ_G0032454) Lagomorpha ANCESTRAL SPECIES 257 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00940000171026 ENSGT00390000010768 #21 ENSGT00940000155828 #22 Pika MODERN SPECIES 3130 CALR (ENSOPRG00000005026) #13 FARSA (ENSOPRG00000005004) #14 SYCE2 (ENSOPRG00000004989) #15 GCDH (ENSOPRG00000004974) #16 KLF1 (ENSOPRG00000004951) #17 DNASE2 (ENSOPRG00000004926) #18 MAST1 (ENSOPRG00000004857) #19 ENSOPRG00000004832 RNASEH2A (ENSOPRG00000004811) #21 PRDX2 (ENSOPRG00000004798) #22 Tree shrew MODERN SPECIES 3524 ENSTBEG00000012672 #22 Primates ANCESTRAL SPECIES 18 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Haplorrhini ANCESTRAL SPECIES 14 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Tarsier MODERN SPECIES 2328 PRDX2 (ENSTSYG00000028395) #22 JUNB (ENSTSYG00000033881) #23 ENSTSYG00000029228 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 5 ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i ENSGT00390000018829.z Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000154552.b.e.b ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b.a ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i ENSGT00390000018829.z Cebidae ANCESTRAL SPECIES 5 ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b.a ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i ENSGT00390000018829.y.a.a ENSGT00390000009366.d Cebidae_a ANCESTRAL SPECIES 59 ENSGT00940000157179 ENSGT00390000011769 ENSGT00910000147120 ENSGT00940000162208 ENSGT00910000147275 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000163155 ENSGT00940000155625.bb ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000155377 Capuchin DUPLICATION Capuchin MODERN SPECIES 564 ENSCCAG00000004912 MCHR2 (ENSCCAG00000029134) ENSCCAG00000027923 #22 SIM1 (ENSCCAG00000011453) ENSCCAG00000027452 ENSCCAG00000024701 ASCC3 (ENSCCAG00000024230) Capuchin MODERN SPECIES 167 TEX51 (ENSCCAG00000028046) GYPC (ENSCCAG00000037164) CNTNAP5 (ENSCCAG00000029015) ENSCCAG00000022004 ENSCCAG00000029671 #22 ENSCCAG00000022252 TSN (ENSCCAG00000026371) ENSCCAG00000026664 ENSCCAG00000029703 ENSCCAG00000032055 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 265 CCDC170 (ENSANAG00000034546) ESR1 (ENSANAG00000033920) ENSANAG00000032083 SYNE1 (ENSANAG00000028713) MYCT1 (ENSANAG00000028766) VIP (ENSANAG00000033466) ENSANAG00000026755 FBXO5 (ENSANAG00000000307) MTRF1L (ENSANAG00000007078) RGS17 (ENSANAG00000020543) OPRM1 (ENSANAG00000036165) IPCEF1 (ENSANAG00000025255) CNKSR3 (ENSANAG00000026546) ENSANAG00000029661 SCAF8 (ENSANAG00000036184) ENSANAG00000014514 #22 TIAM2 (ENSANAG00000025426) TFB1M (ENSANAG00000021469) CLDN20 (ENSANAG00000016075) NOX3 (ENSANAG00000002866) ARID1B (ENSANAG00000031205) TMEM242 (ENSANAG00000021582) ENSANAG00000022533 ENSANAG00000034108 ENSANAG00000020054 ZDHHC14 (ENSANAG00000034945) SNX9 (ENSANAG00000023218) SYNJ2 (ENSANAG00000026575) SERAC1 (ENSANAG00000032062) GTF2H5 (ENSANAG00000029980) ENSANAG00000033750 Mas night monkey MODERN SPECIES 478 ENSANAG00000032603 #22 SIM1 (ENSANAG00000028397) ENSANAG00000036846 ASCC3 (ENSANAG00000021476) GRIK2 (ENSANAG00000000802) ENSANAG00000019962 HACE1 (ENSANAG00000037835) ENSANAG00000036677 BVES (ENSANAG00000015115) POPDC3 (ENSANAG00000026735) ENSANAG00000015673 ENSANAG00000024327 PRDM1 (ENSANAG00000030675) ATG5 (ENSANAG00000022796) ENSANAG00000027713 CRYBG1 (ENSANAG00000023839) Catarrhini ANCESTRAL SPECIES 5 ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 ENSGT00880000138028.b.b ENSGT00550000074866.i Hominoidea ANCESTRAL SPECIES 21 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00910000147093 ENSGT00940000153889.e.b.a.d.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 ENSGT00940000161564 ENSGT00940000161440 Hominidae ANCESTRAL SPECIES 23 ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00950000183120.e.b.a.a.b.b.b.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 ENSGT00940000161564 ENSGT00940000161440 Homo/Pan/Gorilla group ANCESTRAL SPECIES 23 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.h.b ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 Homo/Pan group ANCESTRAL SPECIES 22 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 Pan ANCESTRAL SPECIES 22 ENSGT00940000160575 ENSGT00390000001504 ENSGT00940000164144 ENSGT00940000158713 ENSGT00910000146937 ENSGT00940000153889.f ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00930000151026.f ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00910000148031 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00950000183203.d.h ENSGT00940000153654.ub ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00390000017100 Chimpanzee MODERN SPECIES 4 FLT3 (ENSPTRG00000005740) ENSPTRG00000046829 PAN3 (ENSPTRG00000005742) FLT1 (ENSPTRG00000005743) ENSPTRG00000045890 ENSPTRG00000046663 POMP (ENSPTRG00000005745) SLC46A3 (ENSPTRG00000005746) ENSPTRG00000045489 MTUS2 (ENSPTRG00000005747) ENSPTRG00000046056 SLC7A1 (ENSPTRG00000005750) ENSPTRG00000049804 UBL3 (ENSPTRG00000005751) KATNAL1 (ENSPTRG00000005753) ENSPTRG00000044243 #22 UBE2L5 (ENSPTRG00000050842) ENSPTRG00000048008 USPL1 (ENSPTRG00000005756) ALOX5AP (ENSPTRG00000005757) MEDAG (ENSPTRG00000005758) TEX26 (ENSPTRG00000005759) HSPH1 (ENSPTRG00000005760) B3GLCT (ENSPTRG00000005761) RXFP2 (ENSPTRG00000005762) FRY (ENSPTRG00000005764) ENSPTRG00000045380 ZAR1L (ENSPTRG00000046741) BRCA2 (ENSPTRG00000005766) N4BP2L1 (ENSPTRG00000045602) ENSPTRG00000048653 Bonobo MODERN SPECIES 4 CDX2 (ENSPPAG00000032963) FLT3 (ENSPPAG00000015701) PAN3 (ENSPPAG00000027826) ENSPPAG00000030264 ENSPPAG00000033250 ENSPPAG00000027416 POMP (ENSPPAG00000036286) SLC46A3 (ENSPPAG00000035795) ENSPPAG00000027903 MTUS2 (ENSPPAG00000032687) ENSPPAG00000034238 SLC7A1 (ENSPPAG00000037016) ENSPPAG00000015303 UBL3 (ENSPPAG00000027496) KATNAL1 (ENSPPAG00000033530) ENSPPAG00000037440 #22 UBE2L5 (ENSPPAG00000032233) ENSPPAG00000030148 USPL1 (ENSPPAG00000032740) ENSPPAG00000033826 MEDAG (ENSPPAG00000035081) TEX26 (ENSPPAG00000008979) HSPH1 (ENSPPAG00000012606) B3GLCT (ENSPPAG00000029099) RXFP2 (ENSPPAG00000031019) FRY (ENSPPAG00000039014) ENSPPAG00000029942 ZAR1L (ENSPPAG00000036799) BRCA2 (ENSPPAG00000002166) N4BP2L1 (ENSPPAG00000040605) ENSPPAG00000021320 Gorilla MODERN SPECIES 4 POLR1D (ENSGGOG00000004235) GSX1 (ENSGGOG00000005011) PDX1 (ENSGGOG00000002569) CDX2 (ENSGGOG00000005487) URAD (ENSGGOG00000005489) FLT3 (ENSGGOG00000000882) PAN3 (ENSGGOG00000016079) FLT1 (ENSGGOG00000008750) ENSGGOG00000036812 ENSGGOG00000036780 POMP (ENSGGOG00000015316) SLC46A3 (ENSGGOG00000014254) ENSGGOG00000042729 UBL3 (ENSGGOG00000023146) KATNAL1 (ENSGGOG00000026875) ENSGGOG00000024714 #22 UBE2L5 (ENSGGOG00000006857) HMGB1 (ENSGGOG00000026764) USPL1 (ENSGGOG00000004673) ENSGGOG00000013859 MEDAG (ENSGGOG00000009867) TEX26 (ENSGGOG00000016812) HSPH1 (ENSGGOG00000015313) B3GLCT (ENSGGOG00000002840) RXFP2 (ENSGGOG00000002645) ENSGGOG00000023700 FRY (ENSGGOG00000007253) ZAR1L (ENSGGOG00000015803) BRCA2 (ENSGGOG00000015808) N4BP2L1 (ENSGGOG00000015849) ENSGGOG00000025412 Orangutan MODERN SPECIES 4 CDX2 (ENSPPYG00000005242) URAD (ENSPPYG00000005243) FLT3 (ENSPPYG00000005244) ENSPPYG00000040072 PAN3 (ENSPPYG00000005245) FLT1 (ENSPPYG00000005246) ENSPPYG00000034417 ENSPPYG00000038952 POMP (ENSPPYG00000005247) SLC46A3 (ENSPPYG00000005248) MTUS2 (ENSPPYG00000005249) SLC7A1 (ENSPPYG00000005250) ENSPPYG00000034870 UBL3 (ENSPPYG00000037129) KATNAL1 (ENSPPYG00000005253) ENSPPYG00000031030 #22 UBE2L5 (ENSPPYG00000005254) ENSPPYG00000030447 USPL1 (ENSPPYG00000005543) ENSPPYG00000005255 MEDAG (ENSPPYG00000005256) TEX26 (ENSPPYG00000005257) HSPH1 (ENSPPYG00000005258) B3GLCT (ENSPPYG00000005259) RXFP2 (ENSPPYG00000005260) FRY (ENSPPYG00000005262) ENSPPYG00000041535 ZAR1L (ENSPPYG00000005263) BRCA2 (ENSPPYG00000005264) N4BP2L1 (ENSPPYG00000038196) ENSPPYG00000005266 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00950000183001.a.b.a ENSGT00390000001627.e ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000164932 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 ENSGT00940000155839 ENSGT00940000153295.b ENSGT00390000002563.a ENSGT00390000002563.b.a.a ENSGT00530000063426.b.b ENSGT00940000154798.a.d.a ENSGT00390000004766 ENSGT00950000186448 ENSGT00940000155695 ENSGT00880000138028.b.b Cercopithecinae ANCESTRAL SPECIES 20 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00910000147887 ENSGT00940000158713 ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000155828.o.a #22 ENSGT00940000156630 ENSGT00950000183120.e.b.a.a.a.n ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Cercopithecinae_a ANCESTRAL SPECIES 19 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00910000147887 ENSGT00940000158713 ENSGT00910000146937 ENSGT00910000147093 ENSGT00940000153783.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000155828.o.a #22 ENSGT00940000156630 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462.e ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Macaca ANCESTRAL SPECIES 19 ENSGT00940000162542 ENSGT00940000161261 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000158713 ENSGT00910000147093 ENSGT00940000153783.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00950000183120.e.b.a.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00950000183014.f.b.a.a.t.g.b.b ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 Pig-tailed macaque MODERN SPECIES 125 UBL3 (ENSMNEG00000044962) KATNAL1 (ENSMNEG00000036195) ENSMNEG00000039963 #22 HMGB1 (ENSMNEG00000028891) USPL1 (ENSMNEG00000034203) ALOX5AP (ENSMNEG00000043933) MEDAG (ENSMNEG00000033678) TEX26 (ENSMNEG00000027388) HSPH1 (ENSMNEG00000032386) B3GLCT (ENSMNEG00000035100) RXFP2 (ENSMNEG00000032879) FRY (ENSMNEG00000030299) ENSMNEG00000033135 ZAR1L (ENSMNEG00000029527) BRCA2 (ENSMNEG00000036002) N4BP2L1 (ENSMNEG00000039181) ENSMNEG00000035638 PDS5B (ENSMNEG00000043516) Macaca_a ANCESTRAL SPECIES 19 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00940000158713 ENSGT00910000147093 ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000156630 ENSGT00940000155828.o.a #22 ENSGT00950000183120.e.b.a.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Crab-eating macaque MODERN SPECIES 8 PDX1 (ENSMFAG00000063371) CDX2 (ENSMFAG00000051158) URAD (ENSMFAG00000043442) FLT3 (ENSMFAG00000044854) ENSMFAG00000052223 ENSMFAG00000063510 PAN3 (ENSMFAG00000025538) FLT1 (ENSMFAG00000035718) ENSMFAG00000039222 POMP (ENSMFAG00000025369) SLC46A3 (ENSMFAG00000030072) MTUS2 (ENSMFAG00000032200) SLC7A1 (ENSMFAG00000043457) UBL3 (ENSMFAG00000044955) KATNAL1 (ENSMFAG00000053013) ENSMFAG00000053527 #22 UBE2L5 (ENSMFAG00000045697) ENSMFAG00000030905 USPL1 (ENSMFAG00000032370) ALOX5AP (ENSMFAG00000032586) MEDAG (ENSMFAG00000035649) TEX26 (ENSMFAG00000035671) HSPH1 (ENSMFAG00000018638) B3GLCT (ENSMFAG00000041822) RXFP2 (ENSMFAG00000003580) FRY (ENSMFAG00000040039) ZAR1L (ENSMFAG00000061082) BRCA2 (ENSMFAG00000041961) ENSMFAG00000002717 ENSMFAG00000061510 N4BP2L2 (ENSMFAG00000007968) Cercopithecinae_b ANCESTRAL SPECIES 28 ENSGT00940000153229.A.b ENSGT00940000160575 ENSGT00440000038159.p.b ENSGT00390000001504 ENSGT00910000147887 ENSGT00940000158713 ENSGT00910000146937 ENSGT00910000147093 ENSGT00940000153783.a ENSGT00390000010734.j ENSGT00950000183096.a.a.c.b ENSGT00950000183026.B ENSGT00910000147174 ENSGT00940000155349 ENSGT00390000004952.b ENSGT00940000155828.o.a #22 ENSGT00940000156630 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462.e ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Cercopithecinae_d ANCESTRAL SPECIES 54 ENSGT00390000004952.b ENSGT00940000155828.o.a #22 ENSGT00940000156630 ENSGT00940000154686.g.b ENSGT00390000002316 ENSGT00940000158706 ENSGT00390000018451 ENSGT00390000009484 ENSGT00940000159635 ENSGT00940000155499 ENSGT00940000158948.b ENSGT01030000235462.e ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 Drill MODERN SPECIES 1547 KATNAL1 (ENSMLEG00000037336) ENSMLEG00000033851 #22 UBE2L5 (ENSMLEG00000007318) ENSMLEG00000037253 USPL1 (ENSMLEG00000027348) ALOX5AP (ENSMLEG00000031542) MEDAG (ENSMLEG00000028781) TEX26 (ENSMLEG00000030665) HSPH1 (ENSMLEG00000030837) B3GLCT (ENSMLEG00000033315) Sooty mangabey MODERN SPECIES 125 UBL3 (ENSCATG00000040986) ENSCATG00000037373 #22 KATNAL1 (ENSCATG00000036007) UBE2L5 (ENSCATG00000018077) HMGB1 (ENSCATG00000017216) ENSCATG00000037887 USPL1 (ENSCATG00000034087) ALOX5AP (ENSCATG00000030048) MEDAG (ENSCATG00000028177) TEX26 (ENSCATG00000021596) HSPH1 (ENSCATG00000045191) B3GLCT (ENSCATG00000039061) RXFP2 (ENSCATG00000045277) FRY (ENSCATG00000033487) ZAR1L (ENSCATG00000038889) BRCA2 (ENSCATG00000031672) N4BP2L1 (ENSCATG00000036810) Olive baboon MODERN SPECIES 792 ENSPANG00000010271 ENSPANG00000048506 EFHC2 (ENSPANG00000011868) ENSPANG00000035225 NDP (ENSPANG00000040730) MAOA (ENSPANG00000025811) MAOB (ENSPANG00000025805) ENSPANG00000032233 ENSPANG00000008948 ENSPANG00000037030 PPP1R2C (ENSPANG00000049960) CASK (ENSPANG00000008102) GPR82 (ENSPANG00000010850) GPR34 (ENSPANG00000015410) NYX (ENSPANG00000009956) ENSPANG00000011805 #22 DDX3X (ENSPANG00000023917) ENSPANG00000050530 ENSPANG00000050425 USP9X (ENSPANG00000009041) ENSPANG00000049298 ENSPANG00000040156 ENSPANG00000010629 ENSPANG00000043492 MED14 (ENSPANG00000024675) CXorf38 (ENSPANG00000009515) ATP6AP2 (ENSPANG00000009876) ENSPANG00000003221 BCOR (ENSPANG00000023328) ENSPANG00000049183 MID1IP1 (ENSPANG00000010851) Rhinopithecus ANCESTRAL SPECIES 339 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00910000146889 ENSGT00940000157719 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000155828.o.a #22 ENSGT00940000156143 ENSGT00940000154552.b.g.b ENSGT00940000155377 ENSGT00910000147706 ENSGT00940000155610 Golden snub-nosed monkey MODERN SPECIES 1315 ENSRROG00000042386 ENSRROG00000029618 ENSRROG00000045633 SLC7A1 (ENSRROG00000035928) ENSRROG00000009770 UBL3 (ENSRROG00000044319) ENSRROG00000033132 #22 KATNAL1 (ENSRROG00000034445) UBE2L5 (ENSRROG00000002278) ENSRROG00000033221 ENSRROG00000037184 USPL1 (ENSRROG00000004322) ALOX5AP (ENSRROG00000038443) MEDAG (ENSRROG00000039395) TEX26 (ENSRROG00000042882) HSPH1 (ENSRROG00000032648) B3GLCT (ENSRROG00000042904) RXFP2 (ENSRROG00000036551) FRY (ENSRROG00000037534) ZAR1L (ENSRROG00000028556) BRCA2 (ENSRROG00000039182) ENSRROG00000005500 Black snub-nosed monkey MODERN SPECIES 989 POU3F2 (ENSRBIG00000029294) FBXL4 (ENSRBIG00000038651) FAXC (ENSRBIG00000035827) COQ3 (ENSRBIG00000026935) PNISR (ENSRBIG00000015294) ENSRBIG00000037393 USP45 (ENSRBIG00000009680) CCNC (ENSRBIG00000033255) PRDM13 (ENSRBIG00000038028) MCHR2 (ENSRBIG00000034417) ENSRBIG00000032424 #22 SIM1 (ENSRBIG00000025129) ENSRBIG00000042402 ENSRBIG00000008802 Simiiformes ANCESTRAL SPECIES 13 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Catarrhini ANCESTRAL SPECIES ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Hominoidea ANCESTRAL SPECIES ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00390000008820.e.b.a.a.b Hominidae ANCESTRAL SPECIES ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00390000008820.e.b.a.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00390000008820.e.b.a.a.b Homo/Pan group ANCESTRAL SPECIES ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000266406 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00390000008820.e.b.a.a.b Pan ANCESTRAL SPECIES 14 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00900000143204.b ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00390000008820.e.b.a.a.b ENSGT00940000164420 Chimpanzee MODERN SPECIES 10 NFIX (ENSPTRG00000010555) #10 DAND5 (ENSPTRG00000010554) GADD45GIP1 (ENSPTRG00000010553) #12 RAD23A (ENSPTRG00000010552) #11 CALR (ENSPTRG00000010551) #13 FARSA (ENSPTRG00000010550) #14 SYCE2 (ENSPTRG00000010549) #15 ENSPTRG00000050317 GCDH (ENSPTRG00000010548) #16 KLF1 (ENSPTRG00000010547) #17 DNASE2 (ENSPTRG00000010546) #18 MAST1 (ENSPTRG00000010545) #19 RTBDN (ENSPTRG00000010543) #20 RNASEH2A (ENSPTRG00000010542) #21 THSD8 (ENSPTRG00000049528) PRDX2 (ENSPTRG00000010541) #22 JUNB (ENSPTRG00000029110) #23 HOOK2 (ENSPTRG00000010539) #24 BEST2 (ENSPTRG00000010538) #25 GET3 (ENSPTRG00000010537) #26 TRIR (ENSPTRG00000010536) #27 TNPO2 (ENSPTRG00000010535) #28 FBXW9 (ENSPTRG00000010534) #29 DHPS (ENSPTRG00000010533) #31 WDR83 (ENSPTRG00000010532) #32 WDR83OS (ENSPTRG00000010531) #33 MAN2B1 (ENSPTRG00000010530) #34 ZNF791 (ENSPTRG00000010521) ZNF490 (ENSPTRG00000049030) ENSPTRG00000051618 ZNF564 (ENSPTRG00000023641) Bonobo MODERN SPECIES 10 LYL1 (ENSPPAG00000028076) #9 NFIX (ENSPPAG00000027719) #10 GADD45GIP1 (ENSPPAG00000039356) #12 RAD23A (ENSPPAG00000016916) #11 CALR (ENSPPAG00000006666) #13 FARSA (ENSPPAG00000034266) #14 SYCE2 (ENSPPAG00000028078) #15 ENSPPAG00000027273 GCDH (ENSPPAG00000026417) #16 KLF1 (ENSPPAG00000039322) #17 DNASE2 (ENSPPAG00000034169) #18 MAST1 (ENSPPAG00000035621) #19 RTBDN (ENSPPAG00000025282) #20 RNASEH2A (ENSPPAG00000028092) #21 THSD8 (ENSPPAG00000028013) PRDX2 (ENSPPAG00000034246) #22 JUNB (ENSPPAG00000024799) #23 HOOK2 (ENSPPAG00000008477) #24 BEST2 (ENSPPAG00000036993) #25 GET3 (ENSPPAG00000042483) #26 TRIR (ENSPPAG00000023372) #27 ENSPPAG00000014576 TNPO2 (ENSPPAG00000019494) #28 FBXW9 (ENSPPAG00000028530) #29 DHPS (ENSPPAG00000022756) #31 WDR83 (ENSPPAG00000038802) #32 WDR83OS (ENSPPAG00000014278) #33 MAN2B1 (ENSPPAG00000031820) #34 ENSPPAG00000042840 ZNF490 (ENSPPAG00000030672) ENSPPAG00000035947 Human MODERN SPECIES 10 LYL1 (ENSG00000104903) #9 NFIX (ENSG00000008441) #10 DAND5 (ENSG00000179284) GADD45GIP1 (ENSG00000179271) #12 RAD23A (ENSG00000179262) #11 CALR (ENSG00000179218) #13 FARSA (ENSG00000179115) #14 SYCE2 (ENSG00000161860) #15 GCDH (ENSG00000105607) #16 KLF1 (ENSG00000105610) #17 DNASE2 (ENSG00000105612) #18 MAST1 (ENSG00000105613) #19 RTBDN (ENSG00000132026) #20 RNASEH2A (ENSG00000104889) #21 THSD8 (ENSG00000284491) PRDX2 (ENSG00000167815) #22 JUNB (ENSG00000171223) #23 HOOK2 (ENSG00000095066) #24 BEST2 (ENSG00000039987) #25 GET3 (ENSG00000198356) #26 TRIR (ENSG00000123144) #27 TNPO2 (ENSG00000105576) #28 FBXW9 (ENSG00000132004) #29 GNG14 (ENSG00000283980) DHPS (ENSG00000095059) #31 WDR83OS (ENSG00000105583) #33 WDR83 (ENSG00000123154) #32 ENSG00000269590 MAN2B1 (ENSG00000104774) #34 ZNF791 (ENSG00000173875) ZNF490 (ENSG00000188033) Gorilla MODERN SPECIES 10 LYL1 (ENSGGOG00000023512) #9 NFIX (ENSGGOG00000001831) #10 DAND5 (ENSGGOG00000009692) GADD45GIP1 (ENSGGOG00000022807) #12 RAD23A (ENSGGOG00000023403) #11 CALR (ENSGGOG00000016129) #13 FARSA (ENSGGOG00000003418) #14 ENSGGOG00000003416 #15 GCDH (ENSGGOG00000003411) #16 KLF1 (ENSGGOG00000003408) #17 DNASE2 (ENSGGOG00000003402) #18 MAST1 (ENSGGOG00000003390) #19 RTBDN (ENSGGOG00000001903) #20 RNASEH2A (ENSGGOG00000005846) #21 THSD8 (ENSGGOG00000037364) PRDX2 (ENSGGOG00000025089) #22 JUNB (ENSGGOG00000005566) #23 HOOK2 (ENSGGOG00000005558) #24 BEST2 (ENSGGOG00000005549) #25 ASNA1 (ENSGGOG00000005545) #26 TRIR (ENSGGOG00000005540) #27 ENSGGOG00000013442 #28 FBXW9 (ENSGGOG00000013425) #29 DHPS (ENSGGOG00000013390) #31 WDR83OS (ENSGGOG00000013381) #33 WDR83 (ENSGGOG00000013383) #32 MAN2B1 (ENSGGOG00000013365) #34 ENSGGOG00000043721 ZNF791 (ENSGGOG00000000606) ZNF490 (ENSGGOG00000044086) ENSGGOG00000039550 Orangutan MODERN SPECIES 10 TRMT1 (ENSPPYG00000009622) #8 LYL1 (ENSPPYG00000009621) #9 ENSPPYG00000009620 #10 DAND5 (ENSPPYG00000009619) GADD45GIP1 (ENSPPYG00000038376) #12 RAD23A (ENSPPYG00000009617) #11 CALR (ENSPPYG00000009616) #13 FARSA (ENSPPYG00000009615) #14 GCDH (ENSPPYG00000009613) #16 KLF1 (ENSPPYG00000009612) #17 DNASE2 (ENSPPYG00000009611) #18 MAST1 (ENSPPYG00000009610) #19 ENSPPYG00000009609 #20 RNASEH2A (ENSPPYG00000009608) #21 THSD8 (ENSPPYG00000035108) PRDX2 (ENSPPYG00000009607) #22 JUNB (ENSPPYG00000034415) #23 HOOK2 (ENSPPYG00000009606) #24 BEST2 (ENSPPYG00000009605) #25 GET3 (ENSPPYG00000009604) #26 TRIR (ENSPPYG00000009603) #27 TNPO2 (ENSPPYG00000009602) #28 FBXW9 (ENSPPYG00000009601) #29 DHPS (ENSPPYG00000009600) #31 WDR83 (ENSPPYG00000009599) #32 WDR83OS (ENSPPYG00000009598) #33 MAN2B1 (ENSPPYG00000009597) #34 ZNF791 (ENSPPYG00000009596) ZNF490 (ENSPPYG00000029467) ENSPPYG00000041131 ZNF443 (ENSPPYG00000009595) Gibbon MODERN SPECIES NFIX (ENSNLEG00000012980) #10 DAND5 (ENSNLEG00000012978) GADD45GIP1 (ENSNLEG00000012973) #12 RAD23A (ENSNLEG00000012969) #11 CALR (ENSNLEG00000012958) #13 ENSNLEG00000012957 FARSA (ENSNLEG00000012899) #14 ENSNLEG00000034095 #15 GCDH (ENSNLEG00000012871) #16 ENSNLEG00000029024 KLF1 (ENSNLEG00000012868) #17 DNASE2 (ENSNLEG00000012861) #18 MAST1 (ENSNLEG00000012834) #19 ENSNLEG00000012830 #20 RNASEH2A (ENSNLEG00000012806) #21 PRDX2 (ENSNLEG00000012800) #22 JUNB (ENSNLEG00000012796) #23 ENSNLEG00000012793 #24 TRIR (ENSNLEG00000033688) #27 TNPO2 (ENSNLEG00000012758) #28 FBXW9 (ENSNLEG00000012752) #29 DHPS (ENSNLEG00000012722) #31 WDR83 (ENSNLEG00000012710) #32 WDR83OS (ENSNLEG00000012705) #33 MAN2B1 (ENSNLEG00000012695) #34 ZNF791 (ENSNLEG00000012694) ZNF490 (ENSNLEG00000012691) ZNF564 (ENSNLEG00000012688) ZNF709 (ENSNLEG00000036256) ZNF443 (ENSNLEG00000026561) ZNF799 (ENSNLEG00000034475) Cercopithecidae ANCESTRAL SPECIES 17 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Macaca ANCESTRAL SPECIES 21 ENSGT00530000063646.b.v.a #8 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Pig-tailed macaque MODERN SPECIES 76 TRMT1 (ENSMNEG00000037867) #8 LYL1 (ENSMNEG00000013370) #9 NFIX (ENSMNEG00000032823) #10 DAND5 (ENSMNEG00000040891) GADD45GIP1 (ENSMNEG00000033121) #12 RAD23A (ENSMNEG00000042153) #11 CALR (ENSMNEG00000034740) #13 FARSA (ENSMNEG00000043866) #14 SYCE2 (ENSMNEG00000032767) #15 GCDH (ENSMNEG00000035137) #16 KLF1 (ENSMNEG00000030783) #17 DNASE2 (ENSMNEG00000038975) #18 MAST1 (ENSMNEG00000038625) #19 RTBDN (ENSMNEG00000031687) #20 RNASEH2A (ENSMNEG00000033054) #21 PRDX2 (ENSMNEG00000042230) #22 JUNB (ENSMNEG00000006142) #23 HOOK2 (ENSMNEG00000006128) #24 BEST2 (ENSMNEG00000043730) #25 GET3 (ENSMNEG00000028577) #26 TRIR (ENSMNEG00000007751) #27 TNPO2 (ENSMNEG00000041024) #28 FBXW9 (ENSMNEG00000039654) #29 ENSMNEG00000042372 #30 DHPS (ENSMNEG00000044271) #31 WDR83 (ENSMNEG00000045547) #32 WDR83OS (ENSMNEG00000045544) #33 MAN2B1 (ENSMNEG00000045549) #34 ZNF791 (ENSMNEG00000045545) ZNF490 (ENSMNEG00000045546) ZNF564 (ENSMNEG00000045548) Macaca_a DUPLICATION Macaca_a ANCESTRAL SPECIES ENSGT00940000155828.o.b.a #22 Crab-eating macaque MODERN SPECIES 10 ENSMFAG00000047628 TRMT1 (ENSMFAG00000033143) #8 LYL1 (ENSMFAG00000032986) #9 NFIX (ENSMFAG00000038849) #10 DAND5 (ENSMFAG00000033697) GADD45GIP1 (ENSMFAG00000048260) #12 RAD23A (ENSMFAG00000003404) #11 CALR (ENSMFAG00000040740) #13 FARSA (ENSMFAG00000030595) #14 GCDH (ENSMFAG00000003761) #16 KLF1 (ENSMFAG00000044883) #17 DNASE2 (ENSMFAG00000003665) #18 MAST1 (ENSMFAG00000041128) #19 RTBDN (ENSMFAG00000038313) #20 RNASEH2A (ENSMFAG00000002011) #21 ENSMFAG00000031614 #22 ENSMFAG00000052456 #23 MAN2B1 (ENSMFAG00000042986) #34 ZNF791 (ENSMFAG00000036181) ENSMFAG00000049717 ZNF490 (ENSMFAG00000031592) ENSMFAG00000061912 ZNF799 (ENSMFAG00000020521) ENSMFAG00000034105 ENSMFAG00000001303 ZNF44 (ENSMFAG00000043810) ENSMFAG00000064789 ENSMFAG00000032338 ENSMFAG00000063908 ZNF136 (ENSMFAG00000042768) ENSMFAG00000061729 Macaca_a DUPLICATION Macaca_a ANCESTRAL SPECIES ENSGT00940000155828.o.b.b.a #22 Rhesus MODERN SPECIES 328 USP9Y (ENSMMUG00000045991) DDX3Y (ENSMMUG00000043966) UTY (ENSMMUG00000038182) ENSMMUG00000055280 ENSMMUG00000042225 ENSMMUG00000042267 ENSMMUG00000061325 NLGN4Y (ENSMMUG00000040210) CYorf15A (ENSMMUG00000049104) KDM5D (ENSMMUG00000045017) ENSMMUG00000057579 EIF1AY (ENSMMUG00000043715) ENSMMUG00000059478 RPS4Y2 (ENSMMUG00000038824) ENSMMUG00000039261 ENSMMUG00000061536 #22 ENSMMUG00000056138 XKR3 (ENSMMUG00000039089) ENSMMUG00000049379 ENSMMUG00000064248 ENSMMUG00000042062 CDY (ENSMMUG00000054832) ENSMMUG00000050111 ENSMMUG00000041692 ENSMMUG00000041274 ENSMMUG00000038984 ENSMMUG00000049217 ENSMMUG00000057875 ENSMMUG00000045289 Crab-eating macaque MODERN SPECIES 174 UTY (ENSMFAG00000063023) ENSMFAG00000063890 ENSMFAG00000053995 ENSMFAG00000049348 ENSMFAG00000051040 ENSMFAG00000047494 ENSMFAG00000061191 ENSMFAG00000050377 ENSMFAG00000052978 NLGN4Y (ENSMFAG00000038021) ENSMFAG00000056241 ENSMFAG00000055347 KDM5D (ENSMFAG00000063076) EIF1AY (ENSMFAG00000052371) RPS4Y2 (ENSMFAG00000048442) ENSMFAG00000051695 #22 ENSMFAG00000049576 ENSMFAG00000065658 XKR3 (ENSMFAG00000048309) ENSMFAG00000052765 ENSMFAG00000065739 ENSMFAG00000048008 ENSMFAG00000059356 ENSMFAG00000056918 ENSMFAG00000048100 ENSMFAG00000054020 ENSMFAG00000054407 ENSMFAG00000057622 ENSMFAG00000059046 ENSMFAG00000062404 ENSMFAG00000055594 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000159327 #7 ENSGT00530000063646.b.v.a #8 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00940000155828.o.b.b.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.b.a.a ENSGT00950000182755.b.a.a.a.a.a.a.b ENSGT00940000164096 Rhesus MODERN SPECIES 10 NACC1 (ENSMMUG00000017971) #7 TRMT1 (ENSMMUG00000001167) #8 LYL1 (ENSMMUG00000001166) #9 NFIX (ENSMMUG00000019292) #10 DAND5 (ENSMMUG00000063314) GADD45GIP1 (ENSMMUG00000042251) #12 RAD23A (ENSMMUG00000004393) #11 CALR (ENSMMUG00000004392) #13 FARSA (ENSMMUG00000004390) #14 GCDH (ENSMMUG00000007043) #16 KLF1 (ENSMMUG00000011230) #17 DNASE2 (ENSMMUG00000028866) #18 MAST1 (ENSMMUG00000008740) #19 RTBDN (ENSMMUG00000007322) #20 RNASEH2A (ENSMMUG00000045010) #21 PRDX2 (ENSMMUG00000005689) #22 JUNB (ENSMMUG00000005688) #23 HOOK2 (ENSMMUG00000005686) #24 BEST2 (ENSMMUG00000063236) #25 GET3 (ENSMMUG00000006275) #26 TRIR (ENSMMUG00000006274) #27 TNPO2 (ENSMMUG00000005684) #28 FBXW9 (ENSMMUG00000016870) #29 DHPS (ENSMMUG00000016869) #31 WDR83 (ENSMMUG00000016868) #32 WDR83OS (ENSMMUG00000016863) #34 ZNF791 (ENSMMUG00000016862) ZNF490 (ENSMMUG00000016860) ENSMMUG00000058614 ENSMMUG00000054313 ZNF709 (ENSMMUG00000005236) Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Olive baboon MODERN SPECIES 12 TRMT1 (ENSPANG00000009247) #8 LYL1 (ENSPANG00000014670) #9 NFIX (ENSPANG00000018992) #10 GADD45GIP1 (ENSPANG00000009045) #12 RAD23A (ENSPANG00000014671) #11 CALR (ENSPANG00000005597) #13 FARSA (ENSPANG00000010978) #14 SYCE2 (ENSPANG00000001632) #15 GCDH (ENSPANG00000007728) #16 KLF1 (ENSPANG00000033071) #17 DNASE2 (ENSPANG00000049574) #18 MAST1 (ENSPANG00000015630) #19 RTBDN (ENSPANG00000015629) #20 RNASEH2A (ENSPANG00000034495) #21 THSD8 (ENSPANG00000032212) PRDX2 (ENSPANG00000010732) #22 JUNB (ENSPANG00000018727) #23 HOOK2 (ENSPANG00000014672) #24 BEST2 (ENSPANG00000022682) #25 GET3 (ENSPANG00000017713) #26 TRIR (ENSPANG00000004448) #27 TNPO2 (ENSPANG00000016857) #28 FBXW9 (ENSPANG00000050930) #29 DHPS (ENSPANG00000011701) #31 WDR83 (ENSPANG00000010733) #32 WDR83OS (ENSPANG00000038509) #33 MAN2B1 (ENSPANG00000017977) #34 ZNF791 (ENSPANG00000005118) ZNF490 (ENSPANG00000002672) ZNF709 (ENSPANG00000034349) ENSPANG00000042135 Cercopithecinae_d ANCESTRAL SPECIES 8 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Drill MODERN SPECIES 1150 NFIX (ENSMLEG00000009460) #10 DAND5 (ENSMLEG00000039027) GADD45GIP1 (ENSMLEG00000026252) #12 RAD23A (ENSMLEG00000025874) #11 CALR (ENSMLEG00000043015) #13 FARSA (ENSMLEG00000029157) #14 SYCE2 (ENSMLEG00000040081) #15 GCDH (ENSMLEG00000034975) #16 ENSMLEG00000022275 KLF1 (ENSMLEG00000029486) #17 DNASE2 (ENSMLEG00000042329) #18 ENSMLEG00000014873 #19 RTBDN (ENSMLEG00000029058) #20 RNASEH2A (ENSMLEG00000043654) #21 THSD8 (ENSMLEG00000031315) PRDX2 (ENSMLEG00000007227) #22 JUNB (ENSMLEG00000002218) #23 HOOK2 (ENSMLEG00000042169) #24 BEST2 (ENSMLEG00000036400) #25 GET3 (ENSMLEG00000042440) #26 TNPO2 (ENSMLEG00000018391) #28 FBXW9 (ENSMLEG00000036977) #29 ENSMLEG00000028807 #30 DHPS (ENSMLEG00000039380) #31 WDR83 (ENSMLEG00000006025) #32 WDR83OS (ENSMLEG00000030207) #33 MAN2B1 (ENSMLEG00000033102) #34 ZNF791 (ENSMLEG00000034449) Sooty mangabey MODERN SPECIES 347 TRMT1 (ENSCATG00000039850) #8 LYL1 (ENSCATG00000044487) #9 NFIX (ENSCATG00000043066) #10 DAND5 (ENSCATG00000043902) GADD45GIP1 (ENSCATG00000030476) #12 RAD23A (ENSCATG00000004423) #11 CALR (ENSCATG00000033446) #13 ENSCATG00000024201 #14 SYCE2 (ENSCATG00000041610) #15 GCDH (ENSCATG00000027594) #16 KLF1 (ENSCATG00000043665) #17 DNASE2 (ENSCATG00000039766) #18 MAST1 (ENSCATG00000034930) #19 RTBDN (ENSCATG00000043279) #20 RNASEH2A (ENSCATG00000029609) #21 PRDX2 (ENSCATG00000030663) #22 JUNB (ENSCATG00000021976) #23 HOOK2 (ENSCATG00000035441) #24 BEST2 (ENSCATG00000018527) #25 GET3 (ENSCATG00000010766) #26 TRIR (ENSCATG00000041032) #27 TNPO2 (ENSCATG00000042599) #28 FBXW9 (ENSCATG00000036324) #29 ENSCATG00000036205 #30 ENSCATG00000037007 #31 WDR83 (ENSCATG00000035388) #32 WDR83OS (ENSCATG00000036611) #33 MAN2B1 (ENSCATG00000042104) #34 ZNF791 (ENSCATG00000041735) ZNF490 (ENSCATG00000029197) ENSCATG00000020970 Vervet Monkey MODERN SPECIES 25 TRMT1 (ENSCSAG00000006500) #8 LYL1 (ENSCSAG00000006504) #9 NFIX (ENSCSAG00000006510) #10 DAND5 (ENSCSAG00000006514) GADD45GIP1 (ENSCSAG00000006518) #12 RAD23A (ENSCSAG00000006523) #11 CALR (ENSCSAG00000006527) #13 FARSA (ENSCSAG00000006530) #14 SYCE2 (ENSCSAG00000006533) #15 GCDH (ENSCSAG00000006539) #16 KLF1 (ENSCSAG00000006545) #17 DNASE2 (ENSCSAG00000006550) #18 MAST1 (ENSCSAG00000006558) #19 RTBDN (ENSCSAG00000006564) #20 RNASEH2A (ENSCSAG00000006567) #21 PRDX2 (ENSCSAG00000006571) #22 JUNB (ENSCSAG00000018838) #23 HOOK2 (ENSCSAG00000006578) #24 BEST2 (ENSCSAG00000006582) #25 GET3 (ENSCSAG00000006585) #26 TRIR (ENSCSAG00000006588) #27 TNPO2 (ENSCSAG00000006597) #28 FBXW9 (ENSCSAG00000006605) #29 DHPS (ENSCSAG00000006608) #31 WDR83 (ENSCSAG00000006611) #32 WDR83OS (ENSCSAG00000006616) #33 MAN2B1 (ENSCSAG00000006628) #34 ZNF791 (ENSCSAG00000006632) ZNF490 (ENSCSAG00000006639) ENSCSAG00000006650 ZNF564 (ENSCSAG00000006658) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Golden snub-nosed monkey MODERN SPECIES 975 LYL1 (ENSRROG00000030934) #9 NFIX (ENSRROG00000033828) #10 DAND5 (ENSRROG00000032903) GADD45GIP1 (ENSRROG00000032590) #12 RAD23A (ENSRROG00000040220) #11 CALR (ENSRROG00000044583) #13 FARSA (ENSRROG00000040046) #14 SYCE2 (ENSRROG00000032909) #15 GCDH (ENSRROG00000044762) #16 KLF1 (ENSRROG00000041432) #17 DNASE2 (ENSRROG00000029927) #18 MAST1 (ENSRROG00000042288) #19 RTBDN (ENSRROG00000035994) #20 RNASEH2A (ENSRROG00000043799) #21 THSD8 (ENSRROG00000036021) PRDX2 (ENSRROG00000035034) #22 JUNB (ENSRROG00000025586) #23 HOOK2 (ENSRROG00000026930) #24 BEST2 (ENSRROG00000036441) #25 GET3 (ENSRROG00000034020) #26 TRIR (ENSRROG00000042115) #27 TNPO2 (ENSRROG00000040402) #28 FBXW9 (ENSRROG00000041458) #29 ENSRROG00000041417 #30 DHPS (ENSRROG00000040289) #31 WDR83 (ENSRROG00000017599) #32 WDR83OS (ENSRROG00000035299) #33 MAN2B1 (ENSRROG00000039902) #34 ZNF791 (ENSRROG00000031644) ZNF490 (ENSRROG00000039939) ZNF564 (ENSRROG00000026298) Black snub-nosed monkey MODERN SPECIES 911 UBXN4 (ENSRBIG00000004771) R3HDM1 (ENSRBIG00000033317) ENSRBIG00000028792 ZRANB3 (ENSRBIG00000039852) RAB3GAP1 (ENSRBIG00000043681) MAP3K19 (ENSRBIG00000035927) CCNT2 (ENSRBIG00000033581) ACMSD (ENSRBIG00000032023) TMEM163 (ENSRBIG00000040158) ENSRBIG00000015170 ENSRBIG00000041688 MGAT5 (ENSRBIG00000044917) ENSRBIG00000040148 RNASEH2A (ENSRBIG00000023554) #21 THSD8 (ENSRBIG00000000299) PRDX2 (ENSRBIG00000040222) #22 HOOK2 (ENSRBIG00000036323) #24 BEST2 (ENSRBIG00000038659) #25 GET3 (ENSRBIG00000028609) #26 TRIR (ENSRBIG00000031142) #27 TNPO2 (ENSRBIG00000036652) #28 FBXW9 (ENSRBIG00000037412) #29 ENSRBIG00000040808 #30 DHPS (ENSRBIG00000031601) #31 WDR83 (ENSRBIG00000027958) #32 WDR83OS (ENSRBIG00000027854) #33 MAN2B1 (ENSRBIG00000037745) #34 ZNF791 (ENSRBIG00000000657) ZNF490 (ENSRBIG00000026285) ZNF564 (ENSRBIG00000031165) ZNF44 (ENSRBIG00000029636) Platyrrhini ANCESTRAL SPECIES 16 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.l #33 ENSGT00390000002121.k #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 Cebidae ANCESTRAL SPECIES 20 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.k #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Marmoset MODERN SPECIES 14 TRMT1 (ENSCJAG00000004566) #8 LYL1 (ENSCJAG00000004598) #9 NFIX (ENSCJAG00000004603) #10 DAND5 (ENSCJAG00000004639) GADD45GIP1 (ENSCJAG00000004645) #12 ENSCJAG00000004494 #11 CALR (ENSCJAG00000004650) #13 FARSA (ENSCJAG00000004686) #14 SYCE2 (ENSCJAG00000004733) #15 GCDH (ENSCJAG00000004741) #16 KLF1 (ENSCJAG00000004762) #17 DNASE2 (ENSCJAG00000004764) #18 MAST1 (ENSCJAG00000004772) #19 RTBDN (ENSCJAG00000004863) #20 RNASEH2A (ENSCJAG00000004873) #21 PRDX2 (ENSCJAG00000004882) #22 JUNB (ENSCJAG00000078765) #23 HOOK2 (ENSCJAG00000004942) #24 ENSCJAG00000084405 TRIR (ENSCJAG00000005083) #27 TNPO2 (ENSCJAG00000005096) #28 FBXW9 (ENSCJAG00000005225) #29 ENSCJAG00000045360 DHPS (ENSCJAG00000005244) #31 WDR83 (ENSCJAG00000005272) #32 ENSCJAG00000038528 #33 MAN2B1 (ENSCJAG00000005297) #34 ZNF791 (ENSCJAG00000080833) ZNF490 (ENSCJAG00000005408) ZNF564 (ENSCJAG00000045776) ZNF709 (ENSCJAG00000005418) Cebidae_a ANCESTRAL SPECIES 9 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828.o.b #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121.l #33 ENSGT00390000002121.k #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 Bolivian squirrel monkey MODERN SPECIES 192 LYL1 (ENSSBOG00000035321) #9 NFIX (ENSSBOG00000036002) #10 DAND5 (ENSSBOG00000027807) GADD45GIP1 (ENSSBOG00000022567) #12 RAD23A (ENSSBOG00000023231) #11 CALR (ENSSBOG00000019002) #13 FARSA (ENSSBOG00000031362) #14 SYCE2 (ENSSBOG00000022841) #15 GCDH (ENSSBOG00000021506) #16 KLF1 (ENSSBOG00000034347) #17 DNASE2 (ENSSBOG00000011199) #18 MAST1 (ENSSBOG00000020496) #19 RTBDN (ENSSBOG00000023703) #20 RNASEH2A (ENSSBOG00000033164) #21 THSD8 (ENSSBOG00000036213) PRDX2 (ENSSBOG00000034677) #22 JUNB (ENSSBOG00000019470) #23 HOOK2 (ENSSBOG00000025848) #24 BEST2 (ENSSBOG00000025207) #25 GET3 (ENSSBOG00000034152) #26 TRIR (ENSSBOG00000032465) #27 TNPO2 (ENSSBOG00000019551) #28 FBXW9 (ENSSBOG00000029356) #29 ENSSBOG00000029032 #30 DHPS (ENSSBOG00000033113) #31 WDR83 (ENSSBOG00000030461) #32 WDR83OS (ENSSBOG00000029116) #33 MAN2B1 (ENSSBOG00000025631) #34 ZNF791 (ENSSBOG00000024486) ZNF490 (ENSSBOG00000035661) ZNF564 (ENSSBOG00000025431) Capuchin MODERN SPECIES 234 LYL1 (ENSCCAG00000036697) #9 NFIX (ENSCCAG00000022096) #10 DAND5 (ENSCCAG00000018636) GADD45GIP1 (ENSCCAG00000036734) #12 RAD23A (ENSCCAG00000030313) #11 CALR (ENSCCAG00000000456) #13 FARSA (ENSCCAG00000028176) #14 SYCE2 (ENSCCAG00000033990) #15 GCDH (ENSCCAG00000027806) #16 KLF1 (ENSCCAG00000022356) #17 ENSCCAG00000035903 #18 MAST1 (ENSCCAG00000036093) #19 RTBDN (ENSCCAG00000023878) #20 RNASEH2A (ENSCCAG00000030453) #21 THSD8 (ENSCCAG00000030346) PRDX2 (ENSCCAG00000013200) #22 JUNB (ENSCCAG00000020250) #23 HOOK2 (ENSCCAG00000001971) #24 BEST2 (ENSCCAG00000028789) #25 ASNA1 (ENSCCAG00000036628) #26 TRIR (ENSCCAG00000034041) #27 TNPO2 (ENSCCAG00000024574) #28 FBXW9 (ENSCCAG00000027128) #29 ENSCCAG00000022190 DHPS (ENSCCAG00000020342) #31 WDR83 (ENSCCAG00000034478) #32 WDR83OS (ENSCCAG00000027678) #33 MAN2B1 (ENSCCAG00000032165) #34 ZNF791 (ENSCCAG00000027336) ZNF490 (ENSCCAG00000026766) ZNF564 (ENSCCAG00000027400) Mas night monkey MODERN SPECIES 937 LYL1 (ENSANAG00000037857) #9 NFIX (ENSANAG00000009093) #10 DAND5 (ENSANAG00000022153) GADD45GIP1 (ENSANAG00000021876) #12 RAD23A (ENSANAG00000037597) #11 CALR (ENSANAG00000021327) #13 FARSA (ENSANAG00000037420) #14 SYCE2 (ENSANAG00000036720) #15 KLF1 (ENSANAG00000036457) #17 GCDH (ENSANAG00000036490) #16 DNASE2 (ENSANAG00000021770) #18 MAST1 (ENSANAG00000020839) #19 RTBDN (ENSANAG00000037449) #20 RNASEH2A (ENSANAG00000037932) #21 THSD8 (ENSANAG00000035604) PRDX2 (ENSANAG00000026462) #22 JUNB (ENSANAG00000018377) #23 HOOK2 (ENSANAG00000003110) #24 BEST2 (ENSANAG00000037461) #25 GET3 (ENSANAG00000037482) #26 TRIR (ENSANAG00000036223) #27 TNPO2 (ENSANAG00000036645) #28 FBXW9 (ENSANAG00000033814) #29 ENSANAG00000033935 #30 DHPS (ENSANAG00000035528) #31 MAN2B1 (ENSANAG00000037791) #34 ZNF791 (ENSANAG00000035071) ZNF490 (ENSANAG00000035599) ZNF564 (ENSANAG00000036392) ZNF709 (ENSANAG00000036940) ENSANAG00000033613 Simiiformes ANCESTRAL SPECIES ENSGT00940000155828.p #22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000155828.p #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155828.p #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155828.p #22 Bolivian squirrel monkey MODERN SPECIES 45 TTC39A (ENSSBOG00000034095) EPS15 (ENSSBOG00000021478) OSBPL9 (ENSSBOG00000022113) ENSSBOG00000000079 RAB3B (ENSSBOG00000011518) TXNDC12 (ENSSBOG00000022535) ENSSBOG00000021947 ENSSBOG00000021281 ZFYVE9 (ENSSBOG00000035519) CC2D1B (ENSSBOG00000019712) ORC1 (ENSSBOG00000026616) PRPF38A (ENSSBOG00000019515) TUT4 (ENSSBOG00000013661) SHISAL2A (ENSSBOG00000032493) COA7 (ENSSBOG00000026955) ENSSBOG00000033961 #22 ZYG11B (ENSSBOG00000028596) ZYG11A (ENSSBOG00000026783) ECHDC2 (ENSSBOG00000033599) SCP2 (ENSSBOG00000029047) PODN (ENSSBOG00000027780) SLC1A7 (ENSSBOG00000035725) CPT2 (ENSSBOG00000032010) CZIB (ENSSBOG00000029830) ENSSBOG00000022713 LRP8 (ENSSBOG00000028471) DMRTB1 (ENSSBOG00000035715) GLIS1 (ENSSBOG00000034908) NDC1 (ENSSBOG00000024069) YIPF1 (ENSSBOG00000025846) DIO1 (ENSSBOG00000002599) Strepsirrhini ANCESTRAL SPECIES 28 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 242 NACC1 (ENSOGAG00000031864) #7 TRMT1 (ENSOGAG00000025576) #8 LYL1 (ENSOGAG00000033339) #9 NFIX (ENSOGAG00000017133) #10 DAND5 (ENSOGAG00000026803) GADD45GIP1 (ENSOGAG00000028560) #12 RAD23A (ENSOGAG00000007693) #11 CALR (ENSOGAG00000012249) #13 FARSA (ENSOGAG00000012243) #14 GCDH (ENSOGAG00000012240) #16 KLF1 (ENSOGAG00000025438) #17 DNASE2 (ENSOGAG00000034724) #18 MAST1 (ENSOGAG00000012223) #19 RTBDN (ENSOGAG00000012219) #20 RNASEH2A (ENSOGAG00000012214) #21 ENSOGAG00000024998 #22 JUNB (ENSOGAG00000025664) #23 HOOK2 (ENSOGAG00000028323) #24 BEST2 (ENSOGAG00000026961) #25 GET3 (ENSOGAG00000012205) #26 TRIR (ENSOGAG00000012203) #27 TNPO2 (ENSOGAG00000012192) #28 FBXW9 (ENSOGAG00000012187) #29 DHPS (ENSOGAG00000012805) #31 WDR83 (ENSOGAG00000012803) #32 WDR83OS (ENSOGAG00000012802) #33 MAN2B1 (ENSOGAG00000015392) #34 ZNF791 (ENSOGAG00000015391) ENSOGAG00000005003 ZNF564 (ENSOGAG00000004779) ENSOGAG00000032701 Bushbaby MODERN SPECIES 203 SAFB2 (ENSOGAG00000006855) SAFB (ENSOGAG00000027769) MICOS13 (ENSOGAG00000026645) HSD11B1L (ENSOGAG00000024555) ENSOGAG00000027049 LONP1 (ENSOGAG00000003930) CATSPERD (ENSOGAG00000011003) ENSOGAG00000029819 SPTLC1 (ENSOGAG00000014493) ROR2 (ENSOGAG00000026382) NFIL3 (ENSOGAG00000011750) ENSOGAG00000032987 AUH (ENSOGAG00000011749) SYK (ENSOGAG00000011743) DIRAS2 (ENSOGAG00000001184) ENSOGAG00000032500 #22 GADD45G (ENSOGAG00000002142) ENSOGAG00000032473 SEMA4D (ENSOGAG00000000321) SECISBP2 (ENSOGAG00000000317) CKS2 (ENSOGAG00000028843) SHC3 (ENSOGAG00000011519) S1PR3 (ENSOGAG00000011514) NXNL2 (ENSOGAG00000002167) SPIN1 (ENSOGAG00000002166) CDK20 (ENSOGAG00000008726) ENSOGAG00000012304 ENSOGAG00000027205 ZNF169 (ENSOGAG00000001828) PTPDC1 (ENSOGAG00000006733) BARX1 (ENSOGAG00000003345) Lemuriformes ANCESTRAL SPECIES 35 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Mouse lemur MODERN SPECIES 16 TRMT1 (ENSMICG00000000793) #8 LYL1 (ENSMICG00000045046) #9 NFIX (ENSMICG00000000785) #10 DAND5 (ENSMICG00000046835) GADD45GIP1 (ENSMICG00000038609) #12 RAD23A (ENSMICG00000016290) #11 CALR (ENSMICG00000016284) #13 FARSA (ENSMICG00000016272) #14 GCDH (ENSMICG00000016264) #16 SYCE2 (ENSMICG00000016268) #15 KLF1 (ENSMICG00000016260) #17 ENSMICG00000016255 #18 MAST1 (ENSMICG00000016221) #19 RTBDN (ENSMICG00000028676) #20 RNASEH2A (ENSMICG00000016430) #21 PRDX2 (ENSMICG00000016211) #22 JUNB (ENSMICG00000027217) #23 HOOK2 (ENSMICG00000016176) #24 BEST2 (ENSMICG00000037638) #25 GET3 (ENSMICG00000016170) #26 TRIR (ENSMICG00000027484) #27 TNPO2 (ENSMICG00000016153) #28 FBXW9 (ENSMICG00000016149) #29 ENSMICG00000042997 #30 DHPS (ENSMICG00000005368) #31 WDR83 (ENSMICG00000045845) #32 WDR83OS (ENSMICG00000041694) #33 MAN2B1 (ENSMICG00000030973) #34 ZNF791 (ENSMICG00000001543) ENSMICG00000027449 ZNF564 (ENSMICG00000031514) Lemuriformes_a ANCESTRAL SPECIES 25 ENSGT00940000162404 #9 ENSGT00950000182916.a.b.a.a.a.b.b #10 ENSGT00530000063926.b ENSGT00390000013719 #12 ENSGT00390000012078.a.b #11 ENSGT00950000182915.b.b.a.a #13 ENSGT00390000006387 #14 ENSGT00390000004872 #15 ENSGT00940000158116 #16 ENSGT00940000161856 #17 ENSGT00390000002634.a #18 ENSGT00940000157700 #19 ENSGT00950000183144.B #20 ENSGT00390000010768 #21 ENSGT00870000137755 ENSGT00940000155828 #22 ENSGT00940000161195 #23 ENSGT00940000160152 #24 ENSGT00940000161361 #25 ENSGT00390000003817 #26 ENSGT00390000012267 #27 ENSGT00940000156708.a.a #28 ENSGT00390000006806 #29 ENSGT01100000263497.E.a.a #30 ENSGT00390000008063 #31 ENSGT00940000159016 #32 ENSGT00390000002121 #33 ENSGT01030000234638.b.a.a #34 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT00940000164491 ENSGT00940000164420 Coquerels sifaka MODERN SPECIES 226 LYL1 (ENSPCOG00000027352) #9 NFIX (ENSPCOG00000015718) #10 DAND5 (ENSPCOG00000014620) GADD45GIP1 (ENSPCOG00000008740) #12 RAD23A (ENSPCOG00000023819) #11 CALR (ENSPCOG00000027189) #13 FARSA (ENSPCOG00000014412) #14 SYCE2 (ENSPCOG00000023390) #15 GCDH (ENSPCOG00000027495) #16 KLF1 (ENSPCOG00000024775) #17 DNASE2 (ENSPCOG00000018438) #18 MAST1 (ENSPCOG00000010146) #19 RTBDN (ENSPCOG00000019035) #20 RNASEH2A (ENSPCOG00000003686) #21 THSD8 (ENSPCOG00000027163) PRDX2 (ENSPCOG00000023441) #22 JUNB (ENSPCOG00000013392) #23 HOOK2 (ENSPCOG00000027579) #24 BEST2 (ENSPCOG00000025129) #25 GET3 (ENSPCOG00000027722) #26 TRIR (ENSPCOG00000027525) #27 TNPO2 (ENSPCOG00000018386) #28 FBXW9 (ENSPCOG00000024449) #29 ENSPCOG00000028753 #30 DHPS (ENSPCOG00000028759) #31 WDR83 (ENSPCOG00000019048) #32 WDR83OS (ENSPCOG00000024280) #33 MAN2B1 (ENSPCOG00000018811) #34 ZNF791 (ENSPCOG00000015720) ZNF490 (ENSPCOG00000008287) ZNF564 (ENSPCOG00000027864) Greater bamboo lemur DUPLICATION Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 930 ENSPSMG00000024366 ENSPSMG00000024360 ENSPSMG00000024357 #22 ENSPSMG00000024343 DIPK2B (ENSPSMG00000024329) KDM6A (ENSPSMG00000018596) ENSPSMG00000009118 Greater bamboo lemur MODERN SPECIES 124 ENSPSMG00000017964 #22 MAGI2 (ENSPSMG00000017940) PHTF2 (ENSPSMG00000017572) TMEM60 (ENSPSMG00000017377) ENSPSMG00000017369 PTPN12 (ENSPSMG00000017302) GSAP (ENSPSMG00000017187) FGL2 (ENSPSMG00000017080) CCDC146 (ENSPSMG00000017073) FAM185A (ENSPSMG00000017049) LRRC17 (ENSPSMG00000017023) FBXL13 (ENSPSMG00000017016) ARMC10 (ENSPSMG00000016975) NAPEPLD (ENSPSMG00000016900) PMPCB (ENSPSMG00000016879) DNAJC2 (ENSPSMG00000016789) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 2602 RTBDN (ENSPSMG00000003755) #20 RNASEH2A (ENSPSMG00000003775) #21 THSD8 (ENSPSMG00000003781) ENSPSMG00000003806 #22 Greater bamboo lemur MODERN SPECIES 1094 SYT10 (ENSPSMG00000025328) ENSPSMG00000025331 #22 ENSPSMG00000025337