Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000175447	ENSGT00930000152979	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a
Primates	ANCESTRAL SPECIES	1	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT00930000152979	ENSGT00940000175447	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
Lemuriformes	ANCESTRAL SPECIES	76					ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000157312 #35	ENSGT00940000156915 #36	ENSGT00390000009491.d
Mouse lemur	MODERN SPECIES	15	NSG2 (ENSMICG00000035993) #7	MSX2 (ENSMICG00000026941) #8	ENSMICG00000028823 #9	PLXND1 (ENSMICG00000008079) #10	H1-8 (ENSMICG00000030377) #11	RHO (ENSMICG00000047910) #12	IFT122 (ENSMICG00000008033) #13	MBD4 (ENSMICG00000008022) #14	EFCAB12 (ENSMICG00000008010) #15	ENSMICG00000034607 #16	CAND2 (ENSMICG00000041434) #17	TMEM40 (ENSMICG00000003715) #18	ENSMICG00000033639 #19	RAF1 (ENSMICG00000012172) #20	MKRN2 (ENSMICG00000012164) #21	MKRN2OS (ENSMICG00000038087) #22	TSEN2 (ENSMICG00000016672) #23	PPARG (ENSMICG00000016663) #24	TIMP4 (ENSMICG00000045817) #25	SYN2 (ENSMICG00000003565) #26	ENSMICG00000012731 #27	TAMM41 (ENSMICG00000016586) #28	VGLL4 (ENSMICG00000016559) #29	ENSMICG00000035458 #30	ATG7 (ENSMICG00000016547) #31	SLC6A1 (ENSMICG00000003055) #32	SLC6A11 (ENSMICG00000033698) #33	ATP2B2 (ENSMICG00000002406) #34	ACAD9 (ENSMICG00000007418) #35	IQSEC1 (ENSMICG00000002633) #36	ENSMICG00000007742 #37
Lemuriformes_a	ANCESTRAL SPECIES	162					ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000157312 #35	ENSGT00940000156915 #36	ENSGT00390000009491.d
Greater bamboo lemur	MODERN SPECIES	130				ENSPSMG00000002470 #10	H1-8 (ENSPSMG00000002466) #11	RHO (ENSPSMG00000002457) #12	IFT122 (ENSPSMG00000001543) #13	MBD4 (ENSPSMG00000001016) #14	EFCAB12 (ENSPSMG00000000969) #15	ENSPSMG00000000953 ##16	CAND2 (ENSPSMG00000000926) #17	ENSPSMG00000000888	TMEM40 (ENSPSMG00000000837) #18	RAF1 (ENSPSMG00000000725) #20	MKRN2 (ENSPSMG00000000636) #21	MKRN2OS (ENSPSMG00000000584) #22	TSEN2 (ENSPSMG00000000537) #23	PPARG (ENSPSMG00000000463) #24	TIMP4 (ENSPSMG00000000419) #25	SYN2 (ENSPSMG00000000398) #26	TAMM41 (ENSPSMG00000000346) #28	VGLL4 (ENSPSMG00000000320) #29	ATG7 (ENSPSMG00000000247) #31	HRH1 (ENSPSMG00000000102)	SLC6A1 (ENSPSMG00000025445) #32	SLC6A11 (ENSPSMG00000025382) #33
Coquerels sifaka	MODERN SPECIES	614				PLXND1 (ENSPCOG00000027312) #10	H1-8 (ENSPCOG00000024479) #11	RHO (ENSPCOG00000024236) #12	IFT122 (ENSPCOG00000023934) #13	ENSPCOG00000018583 #14	EFCAB12 (ENSPCOG00000020532) #15	ENSPCOG00000026378 #16	CAND2 (ENSPCOG00000020368) #17	TMEM40 (ENSPCOG00000027785) #18	ENSPCOG00000024646	RAF1 (ENSPCOG00000013436) #20	MKRN2 (ENSPCOG00000013481) #21	MKRN2OS (ENSPCOG00000027519) #22	TSEN2 (ENSPCOG00000019328) #23	PPARG (ENSPCOG00000017510) #24	SYN2 (ENSPCOG00000020181) #26	TIMP4 (ENSPCOG00000025232) #25	TAMM41 (ENSPCOG00000021554) #28	VGLL4 (ENSPCOG00000016845) #29	ATG7 (ENSPCOG00000021597) #31	SLC6A1 (ENSPCOG00000027376) #32	SLC6A11 (ENSPCOG00000012550) #33	ATP2B2 (ENSPCOG00000022973) #34	ENSPCOG00000027035	ACAD9 (ENSPCOG00000028509) #35	IQSEC1 (ENSPCOG00000022781) #36	ENSPCOG00000026952	NUP210 (ENSPCOG00000026371)
Bushbaby	MODERN SPECIES	216	RBSN (ENSOGAG00000014042)	TRH (ENSOGAG00000017199)	ENSOGAG00000031381	TMCC1 (ENSOGAG00000010283)	ENSOGAG00000032612	PLXND1 (ENSOGAG00000010266) #10	RHO (ENSOGAG00000010259) #12	IFT122 (ENSOGAG00000010245) #13	MBD4 (ENSOGAG00000010236) #14	ENSOGAG00000010234 #15	RPL32 (ENSOGAG00000028498) ##16	CAND2 (ENSOGAG00000028928) #17	TMEM40 (ENSOGAG00000003261) #18	RAF1 (ENSOGAG00000003256) #20	MKRN2 (ENSOGAG00000003255) #21	MKRN2OS (ENSOGAG00000031425) #22	ENSOGAG00000002976 #23	PPARG (ENSOGAG00000002971) #24	SYN2 (ENSOGAG00000016700) #26	TIMP4 (ENSOGAG00000016704) #25	ENSOGAG00000006595	ENSOGAG00000031076	TAMM41 (ENSOGAG00000030657) #28	VGLL4 (ENSOGAG00000016184) #29	ATG7 (ENSOGAG00000016175) #31	HRH1 (ENSOGAG00000016172)
Haplorrhini	ANCESTRAL SPECIES	5											ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v	ENSGT00390000004064	ENSGT00940000155616.c.a
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v	ENSGT00390000004064
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.d	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266.a #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.a.c	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.d	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266.a #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.a.c	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.d	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00390000017740.a.b #17	ENSGT00940000153309.c.a.e.b	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266.a #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.a.c	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v
Gorilla	MODERN SPECIES	16	XPC (ENSGGOG00000009997)	TMEM43 (ENSGGOG00000016577)	CHCHD4 (ENSGGOG00000024077)	WNT7A (ENSGGOG00000012654)	ENSGGOG00000042871	FBLN2 (ENSGGOG00000011561)	HDAC11 (ENSGGOG00000007735)	NUP210 (ENSGGOG00000015096)	IQSEC1 (ENSGGOG00000001008) #36	RPL32 (ENSGGOG00000043568) ##16	CAND2 (ENSGGOG00000001004) #17	ENSGGOG00000021954	TMEM40 (ENSGGOG00000028438) #18	RAF1 (ENSGGOG00000023025) #20	MKRN2 (ENSGGOG00000000429) #21	ENSGGOG00000041526 #22	TSEN2 (ENSGGOG00000012488) #23	PPARG (ENSGGOG00000013117) #24	ENSGGOG00000043543	ENSGGOG00000038928	ENSGGOG00000038254	TIMP4 (ENSGGOG00000009761) #25	SYN2 (ENSGGOG00000009751) #26	ENSGGOG00000039682 #28	VGLL4 (ENSGGOG00000003500) #29	ATG7 (ENSGGOG00000003493) #31	HRH1 (ENSGGOG00000038168)	ENSGGOG00000016573	SLC6A1 (ENSGGOG00000000382) #32	SLC6A11 (ENSGGOG00000000379) #33	ATP2B2 (ENSGGOG00000010167) #34
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.d	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00390000017740.a.b #17	ENSGT00940000153309.c.a.e.b	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266.a #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.a.c	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v
Human	MODERN SPECIES	15	LSM3 (ENSG00000170860)	XPC (ENSG00000154767)	TMEM43 (ENSG00000170876)	CHCHD4 (ENSG00000163528)	WNT7A (ENSG00000154764)	FBLN2 (ENSG00000163520)	HDAC11 (ENSG00000163517)	NUP210 (ENSG00000132182)	IQSEC1 (ENSG00000144711) #36	RPL32 (ENSG00000144713) ##16	ENSG00000289809	CAND2 (ENSG00000144712) #17	TMEM40 (ENSG00000088726) #18	RAF1 (ENSG00000132155) #20	MKRN2 (ENSG00000075975) #21	MKRN2OS (ENSG00000225526) #22	TSEN2 (ENSG00000154743) #23	PPARG (ENSG00000132170) #24	TIMP4 (ENSG00000157150) #25	SYN2 (ENSG00000157152) #26	TAMM41 (ENSG00000144559) #28	VGLL4 (ENSG00000144560) #29	ATG7 (ENSG00000197548) #31	HRH1 (ENSG00000196639)	SLC6A1 (ENSG00000157103) #32	SLC6A11 (ENSG00000132164) #33	ATP2B2 (ENSG00000157087) #34	SEC13 (ENSG00000157020)	GHRL (ENSG00000157017)	ENSG00000289763	TATDN2 (ENSG00000157014)
Pan	ANCESTRAL SPECIES	2	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.d	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00940000153309.c.a.e.b	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266.a #23	ENSGT00940000158273 #24	ENSGT00910000148097	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.a.c	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252
Chimpanzee	MODERN SPECIES	16	XPC (ENSPTRG00000014649)	TMEM43 (ENSPTRG00000014648)	CHCHD4 (ENSPTRG00000014647)	WNT7A (ENSPTRG00000046824)	FBLN2 (ENSPTRG00000014642)	HDAC11 (ENSPTRG00000014641)	NUP210 (ENSPTRG00000014640)	ENSPTRG00000046540	IQSEC1 (ENSPTRG00000014639) #36	ENSPTRG00000050657 #16	CAND2 (ENSPTRG00000014637) #17	ENSPTRG00000051489	TMEM40 (ENSPTRG00000014636) #18	RAF1 (ENSPTRG00000014635) #20	MKRN2 (ENSPTRG00000014634) #21	MKRN2OS (ENSPTRG00000046408) #22	TSEN2 (ENSPTRG00000014633) #23	PPARG (ENSPTRG00000014632) #24	ENSPTRG00000045342	ENSPTRG00000043822	TIMP4 (ENSPTRG00000014630) #25	SYN2 (ENSPTRG00000052430) #26	ENSPTRG00000049448	TAMM41 (ENSPTRG00000014628) #28	VGLL4 (ENSPTRG00000014626) #29	ATG7 (ENSPTRG00000014625) #31	HRH1 (ENSPTRG00000030304)	ENSPTRG00000050374	SLC6A1 (ENSPTRG00000014622) #32	SLC6A11 (ENSPTRG00000014621) #33	ENSPTRG00000042808
Bonobo	MODERN SPECIES	16	TMEM43 (ENSPPAG00000000804)	CHCHD4 (ENSPPAG00000032925)	WNT7A (ENSPPAG00000030187)	FBLN2 (ENSPPAG00000015671)	HDAC11 (ENSPPAG00000037567)	NUP210 (ENSPPAG00000037715)	ENSPPAG00000028546	IQSEC1 (ENSPPAG00000036448) #36	RPL32 (ENSPPAG00000008188) ##16	CAND2 (ENSPPAG00000004317) #17	ENSPPAG00000036413	TMEM40 (ENSPPAG00000019163) #18	ENSPPAG00000024005	RAF1 (ENSPPAG00000035239) #20	MKRN2 (ENSPPAG00000036523) #21	MKRN2OS (ENSPPAG00000032216) #22	TSEN2 (ENSPPAG00000035317) #23	PPARG (ENSPPAG00000029006) #24	ENSPPAG00000028973	ENSPPAG00000030837	TIMP4 (ENSPPAG00000036078) #25	SYN2 (ENSPPAG00000038622) #26	ENSPPAG00000040309	TAMM41 (ENSPPAG00000037692) #28	VGLL4 (ENSPPAG00000035709) #29	ATG7 (ENSPPAG00000040386) #31	HRH1 (ENSPPAG00000023416)	SLC6A1 (ENSPPAG00000042842) #32	SLC6A11 (ENSPPAG00000039217) #33	ENSPPAG00000029625	ATP2B2 (ENSPPAG00000043225) #34
Orangutan	MODERN SPECIES	16	COL8A1 (ENSPPYG00000037085)	ROBO2 (ENSPPYG00000013633)	ROBO1 (ENSPPYG00000013634)	ENSPPYG00000037849	GBE1 (ENSPPYG00000025891)	CADM2 (ENSPPYG00000013635)	ENSPPYG00000013636	VGLL3 (ENSPPYG00000013637)	CHMP2B (ENSPPYG00000013639)	POU1F1 (ENSPPYG00000013640)	CGGBP1 (ENSPPYG00000031975)	ZNF654 (ENSPPYG00000013643)	C3orf38 (ENSPPYG00000013644)	CSNKA2IP (ENSPPYG00000034142)	EPHA3 (ENSPPYG00000013646)	MKRN2OS (ENSPPYG00000039535) #22	TSEN2 (ENSPPYG00000013647) #23	PPARG (ENSPPYG00000013648) #24	SYN2 (ENSPPYG00000013649) #26	TIMP4 (ENSPPYG00000030141) #25	ENSPPYG00000013651 #28	VGLL4 (ENSPPYG00000013652) #29	ATG7 (ENSPPYG00000041433) #31	HRH1 (ENSPPYG00000013653)	SLC6A1 (ENSPPYG00000013655) #32	SLC6A11 (ENSPPYG00000013656) #33	ATP2B2 (ENSPPYG00000013657) #34	SEC13 (ENSPPYG00000013658)	GHRL (ENSPPYG00000013659)	TATDN2 (ENSPPYG00000013661)	IRAK2 (ENSPPYG00000013662)
Gibbon	MODERN SPECIES	13	LSM3 (ENSNLEG00000005079)	XPC (ENSNLEG00000005000)	TMEM43 (ENSNLEG00000004956)	CHCHD4 (ENSNLEG00000029809)	ENSNLEG00000004941	FBLN2 (ENSNLEG00000004881)	HDAC11 (ENSNLEG00000004853)	NUP210 (ENSNLEG00000004799)	IQSEC1 (ENSNLEG00000004793) #36	ENSNLEG00000004798	ENSNLEG00000035616 ##16	CAND2 (ENSNLEG00000004774) #17	TMEM40 (ENSNLEG00000004755) #18	RAF1 (ENSNLEG00000004732) #20	MKRN2 (ENSNLEG00000004711) #21	MKRN2OS (ENSNLEG00000030256) #22	TSEN2 (ENSNLEG00000004696) #23	PPARG (ENSNLEG00000004650) #24	ENSNLEG00000029797	ENSNLEG00000004578 #26	TIMP4 (ENSNLEG00000004638) #25	ENSNLEG00000004559 #28	VGLL4 (ENSNLEG00000004535) #29	ATG7 (ENSNLEG00000027005) #31	HRH1 (ENSNLEG00000018917)	ENSNLEG00000030870	SLC6A1 (ENSNLEG00000026605) #32	SLC6A11 (ENSNLEG00000004525) #33	ENSNLEG00000026798 #34	SEC13 (ENSNLEG00000004482)	GHRL (ENSNLEG00000004451)
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.a	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.a	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252	ENSGT00940000153393.B.v	ENSGT00390000004064
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.a	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a.e.b #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000009405.b.c.b.b	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.a	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a.d #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.b	ENSGT00390000009405.b.c.b.b	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34
Cercopithecinae_d	ANCESTRAL SPECIES	12	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.a	ENSGT00940000158523	ENSGT00910000147988	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000009405.b.c.b.b	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00910000147252
Drill	MODERN SPECIES	874	LSM3 (ENSMLEG00000036162)	XPC (ENSMLEG00000041682)	TMEM43 (ENSMLEG00000035818)	ENSMLEG00000031201	WNT7A (ENSMLEG00000042427)	FBLN2 (ENSMLEG00000040866)	HDAC11 (ENSMLEG00000038310)	NUP210 (ENSMLEG00000038717)	IQSEC1 (ENSMLEG00000035708) #36	RPL32 (ENSMLEG00000033655) ##16	CAND2 (ENSMLEG00000034596) #17	TMEM40 (ENSMLEG00000039986) #18	ENSMLEG00000039626	RAF1 (ENSMLEG00000029839) #20	MKRN2 (ENSMLEG00000006880) #21	MKRN2OS (ENSMLEG00000006675) #22	TSEN2 (ENSMLEG00000038210) #23	PPARG (ENSMLEG00000043422) #24	TIMP4 (ENSMLEG00000040251) #25	SYN2 (ENSMLEG00000030880) #26
Sooty mangabey	MODERN SPECIES	650	XPC (ENSCATG00000036725)	TMEM43 (ENSCATG00000038308)	WNT7A (ENSCATG00000033711)	ENSCATG00000033105	FBLN2 (ENSCATG00000038061)	HDAC11 (ENSCATG00000026123)	NUP210 (ENSCATG00000035260)	IQSEC1 (ENSCATG00000037864) #36	RPL32 (ENSCATG00000038198) ##16	CAND2 (ENSCATG00000038720) #17	TMEM40 (ENSCATG00000027847) #18	ENSCATG00000031525	ENSCATG00000001547	ENSCATG00000035852 #20	MKRN2 (ENSCATG00000041591) #21	MKRN2OS (ENSCATG00000040481) #22	TSEN2 (ENSCATG00000031911) #23	PPARG (ENSCATG00000022947) #24	ENSCATG00000017268	TIMP4 (ENSCATG00000034145) #25	SYN2 (ENSCATG00000031791) #26	ENSCATG00000042881	ENSCATG00000031162	TAMM41 (ENSCATG00000033399) #28	VGLL4 (ENSCATG00000041543) #29	ATG7 (ENSCATG00000034745) #31	HRH1 (ENSCATG00000000316)	ENSCATG00000031939	SLC6A1 (ENSCATG00000019250) #32	SLC6A11 (ENSCATG00000032556) #33	ATP2B2 (ENSCATG00000033513) #34
Olive baboon	MODERN SPECIES	11	TMEM43 (ENSPANG00000012906)	CHCHD4 (ENSPANG00000025946)	WNT7A (ENSPANG00000046909)	ENSPANG00000007694	ENSPANG00000047403	HDAC11 (ENSPANG00000024163)	NUP210 (ENSPANG00000006878)	IQSEC1 (ENSPANG00000006877) #36	ENSPANG00000007693 #16	CAND2 (ENSPANG00000018464) #17	TMEM40 (ENSPANG00000014208) #18	RAF1 (ENSPANG00000008568) #20	ENSPANG00000035680	MKRN2 (ENSPANG00000021307) #21	TSEN2 (ENSPANG00000013415) #23	MKRN2OS (ENSPANG00000008481) #22	PPARG (ENSPANG00000016461) #24	SYN2 (ENSPANG00000024762) #26	TIMP4 (ENSPANG00000001070) #25	ENSPANG00000045955	ENSPANG00000031360	TAMM41 (ENSPANG00000025444) #28	VGLL4 (ENSPANG00000024761) #29	ATG7 (ENSPANG00000019142) #31	HRH1 (ENSPANG00000031157)	SLC6A1 (ENSPANG00000009643) #32	SLC6A11 (ENSPANG00000009913) #33	ATP2B2 (ENSPANG00000012883) #34	SEC13 (ENSPANG00000033927)	GHRL (ENSPANG00000022005)	TATDN2 (ENSPANG00000008626)
Macaca	ANCESTRAL SPECIES	5	ENSGT00940000154583	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.q.a.a	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.a.a ##16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000009405.b.c.b.b	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B.v
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.r	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.b	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.a.e.b #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.b.a.a	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B.v	ENSGT00390000004064	ENSGT00940000155616.c.a.e
Rhesus	MODERN SPECIES	11	GRIP2 (ENSMMUG00000006342)	SLC6A6 (ENSMMUG00000006340)	TMEM43 (ENSMMUG00000023124)	XPC (ENSMMUG00000023125)	WNT7A (ENSMMUG00000018445)	FBLN2 (ENSMMUG00000017659)	HDAC11 (ENSMMUG00000001369)	ENSMMUG00000056487	NUP210 (ENSMMUG00000015979)	IQSEC1 (ENSMMUG00000001342) #36	RPL32 (ENSMMUG00000001340) ##16	CAND2 (ENSMMUG00000001339) #17	TMEM40 (ENSMMUG00000010276) #18	RAF1 (ENSMMUG00000007450) #20	MKRN2 (ENSMMUG00000009536) #21	MKRN2OS (ENSMMUG00000031993) #22	TSEN2 (ENSMMUG00000007195) #23	PPARG (ENSMMUG00000007191) #24	TIMP4 (ENSMMUG00000001127) #25	SYN2 (ENSMMUG00000001120) #26	ENSMMUG00000055179	TAMM41 (ENSMMUG00000013372) #28	ENSMMUG00000062782	VGLL4 (ENSMMUG00000021806) #29	ATG7 (ENSMMUG00000021804) #31	HRH1 (ENSMMUG00000056308)	SLC6A1 (ENSMMUG00000005917) #32	SLC6A11 (ENSMMUG00000005916) #33	ATP2B2 (ENSMMUG00000019938) #34	SEC13 (ENSMMUG00000019936)	GHRL (ENSMMUG00000065159)
Crab-eating macaque	MODERN SPECIES	11	XPC (ENSMFAG00000031847)	TMEM43 (ENSMFAG00000047872)	ENSMFAG00000044351	WNT7A (ENSMFAG00000044809)	FBLN2 (ENSMFAG00000003835)	HDAC11 (ENSMFAG00000036363)	ENSMFAG00000058794	NUP210 (ENSMFAG00000044461)	IQSEC1 (ENSMFAG00000043873) #36	ENSMFAG00000045190 #16	CAND2 (ENSMFAG00000044298) #17	TMEM40 (ENSMFAG00000039365) #18	RAF1 (ENSMFAG00000038061) #20	ENSMFAG00000051059	MKRN2 (ENSMFAG00000035845) #21	MKRN2OS (ENSMFAG00000031892) #22	TSEN2 (ENSMFAG00000038583) #23	PPARG (ENSMFAG00000034317) #24	TIMP4 (ENSMFAG00000052548) #25	ENSMFAG00000021078	SYN2 (ENSMFAG00000041997) #26	ENSMFAG00000059255	TAMM41 (ENSMFAG00000033931) #28	VGLL4 (ENSMFAG00000009745) #29	ATG7 (ENSMFAG00000040779) #31	HRH1 (ENSMFAG00000030336)	SLC6A1 (ENSMFAG00000007438) #32	SLC6A11 (ENSMFAG00000034176) #33	ATP2B2 (ENSMFAG00000034151) #34	SEC13 (ENSMFAG00000037200)	GHRL (ENSMFAG00000043669)
Pig-tailed macaque	MODERN SPECIES	546	ENSMNEG00000043632	XPC (ENSMNEG00000038400)	TMEM43 (ENSMNEG00000032802)	ENSMNEG00000040402	WNT7A (ENSMNEG00000037464)	FBLN2 (ENSMNEG00000035537)	HDAC11 (ENSMNEG00000040546)	NUP210 (ENSMNEG00000041495)	ENSMNEG00000029455	IQSEC1 (ENSMNEG00000042270) #36	RPL32 (ENSMNEG00000030893) ##16	CAND2 (ENSMNEG00000044168) #17	TMEM40 (ENSMNEG00000027829) #18	RAF1 (ENSMNEG00000040519) #20	MKRN2 (ENSMNEG00000031197) #21	MKRN2OS (ENSMNEG00000034066) #22	TSEN2 (ENSMNEG00000025898) #23	PPARG (ENSMNEG00000028217) #24	TIMP4 (ENSMNEG00000028992) #25	SYN2 (ENSMNEG00000033226) #26	ENSMNEG00000024024	ENSMNEG00000042157	TAMM41 (ENSMNEG00000040547) #28	VGLL4 (ENSMNEG00000039421) #29	ATG7 (ENSMNEG00000028392) #31	HRH1 (ENSMNEG00000008240)	ENSMNEG00000030516	SLC6A1 (ENSMNEG00000031841) #32	SLC6A11 (ENSMNEG00000031997) #33	ATP2B2 (ENSMNEG00000040193) #34	SEC13 (ENSMNEG00000032098)
Vervet Monkey	MODERN SPECIES	14	GRIP2 (ENSCSAG00000009353)	SLC6A6 (ENSCSAG00000009391)	XPC (ENSCSAG00000009411)	TMEM43 (ENSCSAG00000009426)	CHCHD4 (ENSCSAG00000009431)	WNT7A (ENSCSAG00000009439)	FBLN2 (ENSCSAG00000009449)	HDAC11 (ENSCSAG00000009462)	NUP210 (ENSCSAG00000009474)	IQSEC1 (ENSCSAG00000009482) #36	RPL32 (ENSCSAG00000009485) ##16	CAND2 (ENSCSAG00000009557) #17	TMEM40 (ENSCSAG00000009604) #18	RAF1 (ENSCSAG00000009721) #20	MKRN2 (ENSCSAG00000009754) #21	MKRN2OS (ENSCSAG00000009764) #22	TSEN2 (ENSCSAG00000009822) #23	PPARG (ENSCSAG00000009839) #24	TIMP4 (ENSCSAG00000009845) #25	SYN2 (ENSCSAG00000009855) #26	TAMM41 (ENSCSAG00000009866) #28	VGLL4 (ENSCSAG00000009873) #29	ATG7 (ENSCSAG00000009887) #31	HRH1 (ENSCSAG00000018810)	SLC6A1 (ENSCSAG00000009912) #32	SLC6A11 (ENSCSAG00000009991) #33	ENSCSAG00000010009	ATP2B2 (ENSCSAG00000010018) #34	SEC13 (ENSCSAG00000010026)	GHRL (ENSCSAG00000010031)	TATDN2 (ENSCSAG00000010035)
Rhinopithecus	ANCESTRAL SPECIES	113														ENSGT00940000156084.bb #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273.r #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000016970.h	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00910000148924	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00390000013132.q.b	ENSGT00910000148795	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34
Golden snub-nosed monkey	MODERN SPECIES	2016														ENSRROG00000041930 #20	MKRN2 (ENSRROG00000033767) #21	MKRN2OS (ENSRROG00000037999) #22	TSEN2 (ENSRROG00000041156) #23	ENSRROG00000034587	PPARG (ENSRROG00000044807) #24	TIMP4 (ENSRROG00000043357) #25	SYN2 (ENSRROG00000040768) #26	ENSRROG00000042628	TAMM41 (ENSRROG00000034628) #28	VGLL4 (ENSRROG00000032842) #29	ENSRROG00000038335	ATG7 (ENSRROG00000041008) #31	HRH1 (ENSRROG00000012382)	ENSRROG00000044510	SLC6A1 (ENSRROG00000040161) #32	SLC6A11 (ENSRROG00000031463) #33	ATP2B2 (ENSRROG00000033593) #34
Black snub-nosed monkey	MODERN SPECIES	1833													ENSRBIG00000027349	ENSRBIG00000029284 #20	MKRN2 (ENSRBIG00000039128) #21	MKRN2OS (ENSRBIG00000033018) #22	TSEN2 (ENSRBIG00000033133) #23	PPARG (ENSRBIG00000042269) #24
Platyrrhini	ANCESTRAL SPECIES	18	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.p	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.a.b ##16	ENSGT00940000158890.q	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509.e #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B.v	ENSGT00910000147252	ENSGT00940000153393.B.u.a	ENSGT00390000004064
Cebidae	ANCESTRAL SPECIES	14	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.p	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000158890.q	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509.e #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B.v	ENSGT00910000147252	ENSGT00940000153393.B.u.a	ENSGT00390000004064
Marmoset	MODERN SPECIES	6	ENSCJAG00000042664	XPC (ENSCJAG00000016952)	ENSCJAG00000087072	ENSCJAG00000072125	TMEM43 (ENSCJAG00000016924)	WNT7A (ENSCJAG00000040771)	FBLN2 (ENSCJAG00000016873)	HDAC11 (ENSCJAG00000016844)	NUP210 (ENSCJAG00000016795)	IQSEC1 (ENSCJAG00000016781) #36	ENSCJAG00000061647	CAND2 (ENSCJAG00000016770) #17	TMEM40 (ENSCJAG00000016751) #18	RAF1 (ENSCJAG00000016737) #20	ENSCJAG00000016733 #21	MKRN2OS (ENSCJAG00000040602) #22	TSEN2 (ENSCJAG00000080511) #23	ENSCJAG00000075859	ENSCJAG00000086839	PPARG (ENSCJAG00000016687) #24	TIMP4 (ENSCJAG00000038791) #25	SYN2 (ENSCJAG00000016647) #26	VGLL4 (ENSCJAG00000016643) #29	ENSCJAG00000058577	ATG7 (ENSCJAG00000016583) #31	HRH1 (ENSCJAG00000043961)	ENSCJAG00000084863	ENSCJAG00000070697	ENSCJAG00000072589	SLC6A1 (ENSCJAG00000016551) #32	SLC6A11 (ENSCJAG00000016541) #33
Cebidae_a	ANCESTRAL SPECIES	47	ENSGT00940000154583	ENSGT00390000013951	ENSGT00390000005194	ENSGT00390000009671	ENSGT00390000013132.p	ENSGT00940000158523	ENSGT00940000156047	ENSGT00940000156308	ENSGT00390000009491.d	ENSGT00940000156915 #36	ENSGT00940000153973.c.a.b.b ##16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509.e #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B.v	ENSGT00910000147252	ENSGT00940000153393.B.u.a	ENSGT00390000004064
Capuchin	MODERN SPECIES	281									IQSEC1 (ENSCCAG00000024388) #36	RPL32 (ENSCCAG00000025373) ##16	CAND2 (ENSCCAG00000032849) #17	TMEM40 (ENSCCAG00000020743) #18	RAF1 (ENSCCAG00000023070) #20	MKRN2 (ENSCCAG00000019802) #21	ENSCCAG00000022711	MKRN2OS (ENSCCAG00000031553) #22	TSEN2 (ENSCCAG00000037851) #23	PPARG (ENSCCAG00000027364) #24	SYN2 (ENSCCAG00000034848) #26	TIMP4 (ENSCCAG00000035892) #25	TAMM41 (ENSCCAG00000025773) #28	VGLL4 (ENSCCAG00000032615) #29	ATG7 (ENSCCAG00000035255) #31	SLC6A1 (ENSCCAG00000026677) #32	SLC6A11 (ENSCCAG00000030058) #33	ATP2B2 (ENSCCAG00000032907) #34	SEC13 (ENSCCAG00000026715)	GHRL (ENSCCAG00000022227)	TATDN2 (ENSCCAG00000024974)	IRAK2 (ENSCCAG00000025730)	VHL (ENSCCAG00000031654)
Bolivian squirrel monkey	MODERN SPECIES	62	ATP13A5 (ENSSBOG00000030531)	ATP13A4 (ENSSBOG00000032487)	OPA1 (ENSSBOG00000021973)	HES1 (ENSSBOG00000028215)	ENSSBOG00000033814	CPN2 (ENSSBOG00000014283)	LRRC15 (ENSSBOG00000031469)	ATP13A3 (ENSSBOG00000005544)	TMEM44 (ENSSBOG00000020794)	LSG1 (ENSSBOG00000034938)	FAM43A (ENSSBOG00000018424)	XXYLT1 (ENSSBOG00000034641)	ACAP2 (ENSSBOG00000029437)	RAF1 (ENSSBOG00000015492) #20	MKRN2 (ENSSBOG00000034434) #21	MKRN2OS (ENSSBOG00000033896) #22	TSEN2 (ENSSBOG00000035499) #23	PPARG (ENSSBOG00000005712) #24	ENSSBOG00000030292 #26	TIMP4 (ENSSBOG00000032293) #25	TAMM41 (ENSSBOG00000034374) #28	VGLL4 (ENSSBOG00000026167) #29	ATG7 (ENSSBOG00000024304) #31	HRH1 (ENSSBOG00000015886)	SLC6A1 (ENSSBOG00000022090) #32	SLC6A11 (ENSSBOG00000029132) #33	ATP2B2 (ENSSBOG00000020057) #34	ENSSBOG00000020409	ENSSBOG00000023709	GHRL (ENSSBOG00000005768)	ENSSBOG00000025922
Mas night monkey	MODERN SPECIES	321	SLC6A6 (ENSANAG00000025733)	LSM3 (ENSANAG00000034627)	XPC (ENSANAG00000021069)	TMEM43 (ENSANAG00000036418)	CHCHD4 (ENSANAG00000034814)	WNT7A (ENSANAG00000033071)	FBLN2 (ENSANAG00000027135)	HDAC11 (ENSANAG00000035737)	NUP210 (ENSANAG00000036448)	IQSEC1 (ENSANAG00000028368) #36	ENSANAG00000020589 ##16	CAND2 (ENSANAG00000020366) #17	TMEM40 (ENSANAG00000036821) #18	RAF1 (ENSANAG00000031934) #20	MKRN2 (ENSANAG00000022646) #21	MKRN2OS (ENSANAG00000026143) #22	TSEN2 (ENSANAG00000026891) #23	PPARG (ENSANAG00000020115) #24	TIMP4 (ENSANAG00000032042) #25	SYN2 (ENSANAG00000021892) #26	TAMM41 (ENSANAG00000037740) #28	VGLL4 (ENSANAG00000038129) #29	ENSANAG00000012369	ENSANAG00000032758 #31	HRH1 (ENSANAG00000031051)	ENSANAG00000019292	CIDEC (ENSANAG00000024285)	IL17RE (ENSANAG00000022892)	ENSANAG00000021183	CRELD1 (ENSANAG00000026557)	PRRT3 (ENSANAG00000028211)
Tarsier	MODERN SPECIES	5029													RAF1 (ENSTSYG00000007438) #20	MKRN2 (ENSTSYG00000007429) #21	ENSTSYG00000030920	MKRN2OS (ENSTSYG00000029616) #22	TSEN2 (ENSTSYG00000010816) #23	PPARG (ENSTSYG00000006950) #24	GABRR1 (ENSTSYG00000033942)	PM20D2 (ENSTSYG00000027051)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Glires	ANCESTRAL SPECIES	2	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Rodentia	ANCESTRAL SPECIES	2	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Rodentia_B	ANCESTRAL SPECIES	26	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Kangaroo rat	MODERN SPECIES	331	Fgd5 (ENSDORG00000016297)	Nr2c2 (ENSDORG00000007038)	Mrps25 (ENSDORG00000026838)	Rbsn (ENSDORG00000009815)	Tmcc1 (ENSDORG00000026595)	Plxnd1 (ENSDORG00000000912) #10	ENSDORG00000026967 #11	Rho (ENSDORG00000000911) #12	Ift122 (ENSDORG00000000906) #13	ENSDORG00000000902 #14	Rpl32 (ENSDORG00000008426) ##16	Cand2 (ENSDORG00000008424) #17	ENSDORG00000023579 #18	Raf1 (ENSDORG00000015622) #20	Mkrn2 (ENSDORG00000015621) #21	Mkrn2os (ENSDORG00000028573) #22	Tsen2 (ENSDORG00000003395) #23	Pparg (ENSDORG00000003445) #24	ENSDORG00000009507 #26	Timp4 (ENSDORG00000009509) #25	Tamm41 (ENSDORG00000002091) #28	Vgll4 (ENSDORG00000004378) #29	Atg7 (ENSDORG00000004380) #31	Slc6a1 (ENSDORG00000016380) #32	Slc6a11 (ENSDORG00000016390) #33	Atp2b2 (ENSDORG00000015330) #34	Sec13 (ENSDORG00000015327)	Ghrl (ENSDORG00000012281)	Tatdn2 (ENSDORG00000012279)	Irak2 (ENSDORG00000012277)	Vhl (ENSDORG00000015401)
Myomorpha	ANCESTRAL SPECIES	36	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Muroidea	ANCESTRAL SPECIES	37	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.d ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.d ##16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
Chinese hamster chok1gshd	MODERN SPECIES	144	Marchf8 (ENSCGRG00001003616)	Zfand4 (ENSCGRG00001023303)	Washc2 (ENSCGRG00001019572)	Tmcc1 (ENSCGRG00001016263)	Plxnd1 (ENSCGRG00001007901) #10	H1f8 (ENSCGRG00001024504) #11	Rho (ENSCGRG00001018161) #12	Ift122 (ENSCGRG00001012761) #13	Mbd4 (ENSCGRG00001003507) #14	Efcab12 (ENSCGRG00001000767) #15	ENSCGRG00001000039 ##16	Cand2 (ENSCGRG00001024197) #17	Tmem40 (ENSCGRG00001022432) #18	Raf1 (ENSCGRG00001020096) #20	ENSCGRG00001019373 #21	Mkrn2os (ENSCGRG00001018483) #22	Tsen2 (ENSCGRG00001017681) #23	Pparg (ENSCGRG00001013849) #24	Timp4 (ENSCGRG00001010158) #25	Syn2 (ENSCGRG00001007902) #26	Tamm41 (ENSCGRG00001003506) #28	Vgll4 (ENSCGRG00001001705) #29	Atg7 (ENSCGRG00001017070) #31	Hrh1 (ENSCGRG00001015773)	Slc6a1 (ENSCGRG00001006244) #32	Slc6a11 (ENSCGRG00001000475) #33	Atp2b2 (ENSCGRG00001021784) #34	Sec13 (ENSCGRG00001019327)	Ghrl (ENSCGRG00001018358)	ENSCGRG00001017251	Irak2 (ENSCGRG00001011625)
Golden Hamster	MODERN SPECIES	622	ENSMAUG00000021879	ENSMAUG00000008109	Washc2 (ENSMAUG00000020725)	ENSMAUG00000021669	Plxnd1 (ENSMAUG00000021112) #10	H1f8 (ENSMAUG00000011359) #11	Rho (ENSMAUG00000002081) #12	Ift122 (ENSMAUG00000005778) #13	ENSMAUG00000014245 #14	Efcab12 (ENSMAUG00000010638) #15	ENSMAUG00000020260	Cand2 (ENSMAUG00000005693) #17	Tmem40 (ENSMAUG00000015454) #18	Raf1 (ENSMAUG00000015447) #20	Mkrn2 (ENSMAUG00000014200) #21	Mkrn2os (ENSMAUG00000010492) #22	ENSMAUG00000013859 #23	ENSMAUG00000012323 #24	ENSMAUG00000020153 #26	Timp4 (ENSMAUG00000018049) #25	ENSMAUG00000013097	Tamm41 (ENSMAUG00000017519) #28	Vgll4 (ENSMAUG00000011159) #29	Atg7 (ENSMAUG00000003276) #31	Hrh1 (ENSMAUG00000009874)	Slc6a1 (ENSMAUG00000021551) #32	Slc6a11 (ENSMAUG00000008311) #33	Atp2b2 (ENSMAUG00000009448) #34	Sec13 (ENSMAUG00000012999)	Ghrl (ENSMAUG00000021031)	Tatdn2 (ENSMAUG00000008081)
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
Northern American deer mouse	MODERN SPECIES	16	Zfand4 (ENSPEMG00000008943)	Washc2 (ENSPEMG00000017284)	Tmcc1 (ENSPEMG00000000449)	ENSPEMG00000024601	Plxnd1 (ENSPEMG00000008271) #10	H1f8 (ENSPEMG00000011381) #11	Rho (ENSPEMG00000008463) #12	Ift122 (ENSPEMG00000017389) #13	Mbd4 (ENSPEMG00000006226) #14	Efcab12 (ENSPEMG00000012553) #15	ENSPEMG00000012965 ##16	ENSPEMG00000029699 ##17	Tmem40 (ENSPEMG00000002944) #18	Raf1 (ENSPEMG00000012728) #20	Mkrn2 (ENSPEMG00000002776) #21	Mkrn2os (ENSPEMG00000012076) #22	Tsen2 (ENSPEMG00000013175) #23	Pparg (ENSPEMG00000013545) #24	Timp4 (ENSPEMG00000026166) #25	Syn2 (ENSPEMG00000016120) #26	Tamm41 (ENSPEMG00000017033) #28	Vgll4 (ENSPEMG00000026845) #29	Atg7 (ENSPEMG00000010473) #31	Hrh1 (ENSPEMG00000028414)	Slc6a1 (ENSPEMG00000011702) #32	Slc6a11 (ENSPEMG00000020194) #33	Atp2b2 (ENSPEMG00000000259) #34	Sec13 (ENSPEMG00000009433)	Ghrl (ENSPEMG00000001433)	Tatdn2 (ENSPEMG00000000467)	Irak2 (ENSPEMG00000012267)
Prairie vole	MODERN SPECIES	84	ENSMOCG00000018066	Washc2 (ENSMOCG00000018011)	Tmcc1 (ENSMOCG00000009713)	Plxnd1 (ENSMOCG00000014026) #10	H1f8 (ENSMOCG00000005594) #11	Rho (ENSMOCG00000022070) #12	Ift122 (ENSMOCG00000014549) #13	ENSMOCG00000002466 #14	ENSMOCG00000019929 #14	Efcab12 (ENSMOCG00000020496) #15	ENSMOCG00000015206 #16	Cand2 (ENSMOCG00000012580) #17	Tmem40 (ENSMOCG00000021932) #18	Raf1 (ENSMOCG00000012403) #20	Mkrn2 (ENSMOCG00000015472) #21	Mkrn2os (ENSMOCG00000010265) #22	Tsen2 (ENSMOCG00000020824) #23	Pparg (ENSMOCG00000017202) #24	ENSMOCG00000013854	Timp4 (ENSMOCG00000013297) #25	Syn2 (ENSMOCG00000000368) #26	Tamm41 (ENSMOCG00000020960) #28	Vgll4 (ENSMOCG00000012297) #29	Atg7 (ENSMOCG00000009400) #31	ENSMOCG00000016658	Hrh1 (ENSMOCG00000009133)	Slc6a1 (ENSMOCG00000011689) #32	Slc6a11 (ENSMOCG00000010284) #33	Atp2b2 (ENSMOCG00000022399) #34	Sec13 (ENSMOCG00000020249)	Ghrl (ENSMOCG00000014220)
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Mus	ANCESTRAL SPECIES	12	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000155716.h	ENSGT00940000155716.g	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000155716.g	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.b.b ##16	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT01090000263461
Mouse	MODERN SPECIES	15	Marchf8 (ENSMUSG00000025702)	Zfand4 (ENSMUSG00000042213)	Washc2 (ENSMUSG00000024104)	Tmcc1 (ENSMUSG00000030126)	Plxnd1 (ENSMUSG00000030123) #10	H1f8 (ENSMUSG00000042279) #11	Rho (ENSMUSG00000030324) #12	Ift122 (ENSMUSG00000030323) #13	Mbd4 (ENSMUSG00000030322) #14	Efcab12 (ENSMUSG00000030321) #15	Rpl32 (ENSMUSG00000057841) ##16	Cand2 (ENSMUSG00000030319) #17	Tmem40 (ENSMUSG00000059900) #18	Raf1 (ENSMUSG00000000441) #20	Mkrn2 (ENSMUSG00000000439) #21	Mkrn2os (ENSMUSG00000068011) #22	Tsen2 (ENSMUSG00000042389) #23	Pparg (ENSMUSG00000000440) #24	Timp4 (ENSMUSG00000030317) #25	Syn2 (ENSMUSG00000009394) #26	Tamm41 (ENSMUSG00000030316) #28	Vgll4 (ENSMUSG00000030315) #29	Atg7 (ENSMUSG00000030314) #31	Hrh1 (ENSMUSG00000053004)	Slc6a1 (ENSMUSG00000030310) #32	Slc6a11 (ENSMUSG00000030307) #33	Atp2b2 (ENSMUSG00000030302) #34	Sec13 (ENSMUSG00000030298)	Ghrl (ENSMUSG00000064177)	ENSMUSG00000121578	Tatdn2 (ENSMUSG00000056952)
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000155716.h	ENSGT00940000155716.g	ENSGT00940000153997.b.a.a	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
spretus	MODERN SPECIES	15	MGP_SPRETEiJ_G0029796	Zfand4 (MGP_SPRETEiJ_G0029795)	Washc2 (MGP_SPRETEiJ_G0029794)	MGP_SPRETEiJ_G0029793	Plxnd1 (MGP_SPRETEiJ_G0029792) #10	H1f8 (MGP_SPRETEiJ_G0029791) #11	Rho (MGP_SPRETEiJ_G0029790) #12	Ift122 (MGP_SPRETEiJ_G0029789) #13	Mbd4 (MGP_SPRETEiJ_G0029788) #14	Efcab12 (MGP_SPRETEiJ_G0029787) #15	MGP_SPRETEiJ_G0029786 #16	Cand2 (MGP_SPRETEiJ_G0029785) #17	Tmem40 (MGP_SPRETEiJ_G0029784) #18	Raf1 (MGP_SPRETEiJ_G0029783) #20	Mkrn2 (MGP_SPRETEiJ_G0029782) #21	Mkrn2os (MGP_SPRETEiJ_G0029781) #22	Tsen2 (MGP_SPRETEiJ_G0029780) #23	Pparg (MGP_SPRETEiJ_G0029779) #24	Timp4 (MGP_SPRETEiJ_G0029778) #25	MGP_SPRETEiJ_G0029777	Syn2 (MGP_SPRETEiJ_G0029776) #26	Tamm41 (MGP_SPRETEiJ_G0029775) #28	Vgll4 (MGP_SPRETEiJ_G0029774) #29	Atg7 (MGP_SPRETEiJ_G0029773) #31	Hrh1 (MGP_SPRETEiJ_G0029772)	Slc6a1 (MGP_SPRETEiJ_G0029771) #32	Slc6a11 (MGP_SPRETEiJ_G0029770) #33	Atp2b2 (MGP_SPRETEiJ_G0029769) #34	Sec13 (MGP_SPRETEiJ_G0029768)	Ghrl (MGP_SPRETEiJ_G0029767)	Tatdn2 (MGP_SPRETEiJ_G0029766)
Steppe mouse	MODERN SPECIES	3022	Washc2 (ENSMSIG00000001796)	ENSMSIG00000001776	Tmcc1 (ENSMSIG00000001659)	ENSMSIG00000001422 #10	H1f8 (ENSMSIG00000001367) #11	ENSMSIG00000001359	Rho (ENSMSIG00000001309) #12	Ift122 (ENSMSIG00000000881) #13	Mbd4 (ENSMSIG00000000793) #14	Efcab12 (ENSMSIG00000000741) #15	Rpl32 (ENSMSIG00000000692) ##16	Cand2 (ENSMSIG00000000651) #17	Tmem40 (ENSMSIG00000000359) #18	Raf1 (ENSMSIG00000000188) #20	ENSMSIG00000031938 #21	Mkrn2os (ENSMSIG00000031937) #22	Tsen2 (ENSMSIG00000031936) #23	Pparg (ENSMSIG00000031935) #24	Timp4 (ENSMSIG00000031934) #25	ENSMSIG00000031933	Syn2 (ENSMSIG00000031932) #26	ENSMSIG00000031931 #28	ENSMSIG00000031930 #29	ENSMSIG00000031929	Atg7 (ENSMSIG00000031927) #31
Ryukyu mouse	MODERN SPECIES	15	MGP_CAROLIEiJ_G0028768	Zfand4 (MGP_CAROLIEiJ_G0028767)	Washc2 (MGP_CAROLIEiJ_G0028766)	Tmcc1 (MGP_CAROLIEiJ_G0028765)	Plxnd1 (MGP_CAROLIEiJ_G0028764) #10	H1f8 (MGP_CAROLIEiJ_G0028763) #11	Rho (MGP_CAROLIEiJ_G0028762) #12	Ift122 (MGP_CAROLIEiJ_G0028761) #13	Mbd4 (MGP_CAROLIEiJ_G0028760) #14	Efcab12 (MGP_CAROLIEiJ_G0028759) #15	MGP_CAROLIEiJ_G0028758 #16	Cand2 (MGP_CAROLIEiJ_G0028757) #17	MGP_CAROLIEiJ_G0028756 #18	Raf1 (MGP_CAROLIEiJ_G0028755) #20	Mkrn2 (MGP_CAROLIEiJ_G0028754) #21	Mkrn2os (MGP_CAROLIEiJ_G0028753) #22	Tsen2 (MGP_CAROLIEiJ_G0028752) #23	Pparg (MGP_CAROLIEiJ_G0028751) #24	Timp4 (MGP_CAROLIEiJ_G0028750) #25	MGP_CAROLIEiJ_G0028749	Syn2 (MGP_CAROLIEiJ_G0028748) #26	Tamm41 (MGP_CAROLIEiJ_G0028747) #28	Vgll4 (MGP_CAROLIEiJ_G0028746) #29	Atg7 (MGP_CAROLIEiJ_G0028745) #31	Hrh1 (MGP_CAROLIEiJ_G0028744)	Slc6a1 (MGP_CAROLIEiJ_G0028743) #32	Slc6a11 (MGP_CAROLIEiJ_G0028742) #33	Atp2b2 (MGP_CAROLIEiJ_G0028741) #34	Sec13 (MGP_CAROLIEiJ_G0028740)	Ghrl (MGP_CAROLIEiJ_G0028739)	Tatdn2 (MGP_CAROLIEiJ_G0028738)
Shrew mouse	MODERN SPECIES	11	MGP_PahariEiJ_G0022519	MGP_PahariEiJ_G0022518	Washc2 (MGP_PahariEiJ_G0022517)	Tmcc1 (MGP_PahariEiJ_G0022516)	Plxnd1 (MGP_PahariEiJ_G0022515) #10	H1f8 (MGP_PahariEiJ_G0022514) #11	Rho (MGP_PahariEiJ_G0022513) #12	Ift122 (MGP_PahariEiJ_G0022512) #13	MGP_PahariEiJ_G0022511 #14	Efcab12 (MGP_PahariEiJ_G0022510) #15	MGP_PahariEiJ_G0022509 #16	Cand2 (MGP_PahariEiJ_G0022508) #17	Tmem40 (MGP_PahariEiJ_G0022507) #18	Raf1 (MGP_PahariEiJ_G0022506) #20	Mkrn2 (MGP_PahariEiJ_G0022505) #21	Mkrn2os (MGP_PahariEiJ_G0022504) #22	Tsen2 (MGP_PahariEiJ_G0022503) #23	Pparg (MGP_PahariEiJ_G0022502) #24	Timp4 (MGP_PahariEiJ_G0022501) #25	MGP_PahariEiJ_G0022500	Syn2 (MGP_PahariEiJ_G0022499) #26	Tamm41 (MGP_PahariEiJ_G0022498) #28	Vgll4 (MGP_PahariEiJ_G0022497) #29	Atg7 (MGP_PahariEiJ_G0022496) #31	Hrh1 (MGP_PahariEiJ_G0022495)	Slc6a1 (MGP_PahariEiJ_G0022494) #32	Slc6a11 (MGP_PahariEiJ_G0022493) #33	Atp2b2 (MGP_PahariEiJ_G0022492) #34	Sec13 (MGP_PahariEiJ_G0022491)	Ghrl (MGP_PahariEiJ_G0022490)	Tatdn2 (MGP_PahariEiJ_G0022489)
Rat	MODERN SPECIES	14	Washc2c (ENSRNOG00000011653)	LOC680385 (ENSRNOG00000011606)	Tmcc1 (ENSRNOG00000011614)	AABR07061825.2 (ENSRNOG00000059964)	Plxnd1 (ENSRNOG00000025209) #10	H1f8 (ENSRNOG00000025251) #11	Rho (ENSRNOG00000011144) #12	Ift122 (ENSRNOG00000010952) #13	Mbd4 (ENSRNOG00000010919) #14	Efcab12 (ENSRNOG00000026176) #15	Rpl32 (ENSRNOG00000010746) #16	Cand2 (ENSRNOG00000010473) #17	Tmem40 (ENSRNOG00000010430) #18	Raf1 (ENSRNOG00000010153) #20	Mkrn2 (ENSRNOG00000009176) #21	Mkrn2os (ENSRNOG00000070957) #22	Tsen2 (ENSRNOG00000060175) #23	Pparg (ENSRNOG00000008839) #24	Timp4 (ENSRNOG00000007955) #25	ENSRNOG00000069227	AC128901.1 (ENSRNOG00000028826)	ENSRNOG00000067395	Syn2 (ENSRNOG00000008157) #26	Tamm41 (ENSRNOG00000007874) #28	Vgll4 (ENSRNOG00000007822) #29	Atg7 (ENSRNOG00000007486) #31	ENSRNOG00000069624	LOC120102367 (ENSRNOG00000067090)	Hrh1 (ENSRNOG00000007420)	Slc6a1 (ENSRNOG00000006527) #32	Slc6a11 (ENSRNOG00000005697) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	1707	Mrps25 (ENSNGAG00000021861)	Rbsn (ENSNGAG00000022967)	Trh (ENSNGAG00000022332)	Tmcc1 (ENSNGAG00000010573)	Plxnd1 (ENSNGAG00000020476) #10	H1f8 (ENSNGAG00000023630) #11	Rho (ENSNGAG00000020656) #12	Ift122 (ENSNGAG00000022462) #13	ENSNGAG00000017381 #14	Efcab12 (ENSNGAG00000008314) #15	ENSNGAG00000024001 ##16	Cand2 (ENSNGAG00000024002) #17	Tmem40 (ENSNGAG00000021850) #18	Raf1 (ENSNGAG00000019548) #20	Mkrn2 (ENSNGAG00000012579) #21	Mkrn2os (ENSNGAG00000019573) #22	ENSNGAG00000013561 #23	Pparg (ENSNGAG00000014683) #24	Timp4 (ENSNGAG00000021746) #25	Syn2 (ENSNGAG00000022266) #26	Tamm41 (ENSNGAG00000013592) #28	Vgll4 (ENSNGAG00000013946) #29	ENSNGAG00000003030	Hrh1 (ENSNGAG00000021456)	Slc6a1 (ENSNGAG00000015663) #32	Slc6a11 (ENSNGAG00000013842) #33	Atp2b2 (ENSNGAG00000015473) #34	Sec13 (ENSNGAG00000003425)	Ghrl (ENSNGAG00000022045)	Tatdn2 (ENSNGAG00000011523)	Irak2 (ENSNGAG00000011088)
Lesser Egyptian jerboa	MODERN SPECIES	45	Mrps25 (ENSJJAG00000013413)	Rbsn (ENSJJAG00000024360)	ENSJJAG00000023012	Tmcc1 (ENSJJAG00000019999)	ENSJJAG00000020659	Plxnd1 (ENSJJAG00000014069) #10	ENSJJAG00000014828 #11	Rho (ENSJJAG00000022285) #12	Ift122 (ENSJJAG00000020288) #13	ENSJJAG00000016695 #14	ENSJJAG00000021233 #16	Cand2 (ENSJJAG00000018247) #17	Tmem40 (ENSJJAG00000009444) #18	ENSJJAG00000016961 #20	Mkrn2 (ENSJJAG00000019765) #21	Mkrn2os (ENSJJAG00000022652) #22	ENSJJAG00000015646	ENSJJAG00000002861 #23	Pparg (ENSJJAG00000023734) #24	ENSJJAG00000012036	ENSJJAG00000015072 #26	Timp4 (ENSJJAG00000015654) #25	Tamm41 (ENSJJAG00000015841) #28	Vgll4 (ENSJJAG00000017532) #29	Atg7 (ENSJJAG00000021264) #31	Hrh1 (ENSJJAG00000012905)	Slc6a1 (ENSJJAG00000013717) #32	Slc6a11 (ENSJJAG00000008690) #33	Atp2b2 (ENSJJAG00000009628) #34	Sec13 (ENSJJAG00000023600)	Ghrl (ENSJJAG00000020141)
Rodentia_A	ANCESTRAL SPECIES	27	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000156062 #26	ENSGT00940000159798 #25	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
Hystricomorpha	ANCESTRAL SPECIES	48	ENSGT00640000091558	ENSGT00390000007159	ENSGT00940000155189	ENSGT00940000160900 #11	ENSGT00390000016951	ENSGT01020000230394.e.b.a #10	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000153655.B	ENSGT00940000157922	ENSGT00940000158393	ENSGT00640000091558	ENSGT00390000007159	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00940000157312.h #35	ENSGT00940000157200	ENSGT00390000005378	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B	ENSGT00940000156857	ENSGT00940000155180.b	ENSGT00390000013224
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000153655.B	ENSGT00940000157922	ENSGT00940000158393	ENSGT00640000091558	ENSGT00390000007159	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00940000157312.h #35	ENSGT00940000157200	ENSGT00390000005378	ENSGT00390000006066	ENSGT00940000158804	ENSGT00390000003219	ENSGT00940000158155	ENSGT00950000182956.b.b.a.b	ENSGT00940000158225	ENSGT00940000161249	ENSGT00940000155867	ENSGT00440000033504.B	ENSGT00940000156857	ENSGT00940000155180.b	ENSGT00390000013224
Long-tailed chinchilla	MODERN SPECIES	136	C3orf20 (ENSCLAG00000013841)	FGD5 (ENSCLAG00000011953)	NR2C2 (ENSCLAG00000011082)	MRPS25 (ENSCLAG00000008381)	RBSN (ENSCLAG00000011613)	TMCC1 (ENSCLAG00000014727)	PLXND1 (ENSCLAG00000012627) #10	RHO (ENSCLAG00000006233) #12	IFT122 (ENSCLAG00000006170) #13	MBD4 (ENSCLAG00000008974) #14	ENSCLAG00000007426 #16	CAND2 (ENSCLAG00000007541) #17	TMEM40 (ENSCLAG00000009668) #18	RAF1 (ENSCLAG00000010316) #20	MKRN2 (ENSCLAG00000008755) #21	MKRN2OS (ENSCLAG00000009109) #22	ENSCLAG00000011764 #35	FKBP4 (ENSCLAG00000013510)	ITFG2 (ENSCLAG00000016639)	TEX52 (ENSCLAG00000013429)	FOXM1 (ENSCLAG00000014183)	RHNO1 (ENSCLAG00000017326)	TULP3 (ENSCLAG00000017345)	TEAD4 (ENSCLAG00000012070)	ENSCLAG00000008194	ENSCLAG00000009091	FAM171A1 (ENSCLAG00000009809)	NMT2 (ENSCLAG00000008204)	RPP38 (ENSCLAG00000010194)	ACBD7 (ENSCLAG00000010962)	OLAH (ENSCLAG00000015435)
Degu	MODERN SPECIES	274	MRPS25 (ENSODEG00000001966)	NR2C2 (ENSODEG00000001892)	ENSODEG00000001861	ENSODEG00000001849	ENSODEG00000001772	TMCC1 (ENSODEG00000001710)	PLXND1 (ENSODEG00000003347) #10	RHO (ENSODEG00000003304) #12	IFT122 (ENSODEG00000003013) #13	ENSODEG00000002902 #14	ENSODEG00000002891 ##16	CAND2 (ENSODEG00000002821) #17	TMEM40 (ENSODEG00000002755) #18	RAF1 (ENSODEG00000002734) #20	MKRN2 (ENSODEG00000002702) #21	MKRN2OS (ENSODEG00000002688) #22	ENSODEG00000002676	SLC6A11 (ENSODEG00000002665) #33	SLC6A1 (ENSODEG00000002644) #32	ATG7 (ENSODEG00000002299) #31	ENSODEG00000002124 #29	ENSODEG00000018794	TAMM41 (ENSODEG00000002076) #28	TIMP4 (ENSODEG00000002023) #25	ENSODEG00000001988 #26	PPARG (ENSODEG00000002659) #24	TSEN2 (ENSODEG00000002629) #23	ENSODEG00000002503	HMCES (ENSODEG00000002476)	ENSODEG00000018801	ENSODEG00000002441
Guinea pig	MODERN SPECIES	109	C3orf20 (ENSCPOG00000006783)	FGD5 (ENSCPOG00000013157)	NR2C2 (ENSCPOG00000001512)	MRPS25 (ENSCPOG00000020398)	RBSN (ENSCPOG00000003200)	TMCC1 (ENSCPOG00000009299)	PLXND1 (ENSCPOG00000004989) #10	RHO (ENSCPOG00000004984) #12	IFT122 (ENSCPOG00000004975) #13	ENSCPOG00000004970 #14	RPL32 (ENSCPOG00000019967) ##16	CAND2 (ENSCPOG00000023286) #17	TMEM40 (ENSCPOG00000025632) #18	RAF1 (ENSCPOG00000001210) #20	MKRN2 (ENSCPOG00000001208) #21	MKRN2OS (ENSCPOG00000032819) #22	ENSCPOG00000009944 #35	FKBP4 (ENSCPOG00000002453)	ITFG2 (ENSCPOG00000021230)	ENSCPOG00000005850	ENSCPOG00000031884	ARHGAP21 (ENSCPOG00000004505)	ENKUR (ENSCPOG00000009590)	ENSCPOG00000000291	GPR158 (ENSCPOG00000001565)	ENSCPOG00000034310	ENSCPOG00000013721	ENSCPOG00000039199	GAD2 (ENSCPOG00000013724)	APBB1IP (ENSCPOG00000004077)	PDSS1 (ENSCPOG00000026219)
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000040044	ENSHGLG00000040416 #11	RHO (ENSHGLG00000006668) #12	IFT122 (ENSHGLG00000009113) #13	MBD4 (ENSHGLG00000009034) #14	ENSHGLG00000015777 #15	ENSHGLG00000040769 #16	ENSHGLG00000015580 #17	ENSHGLG00000015498 #18	ENSHGLG00000033042	ENSHGLG00000039038	ENSHGLG00000032617	ENSHGLG00000037560	ENSHGLG00000018214 #20	ENSHGLG00000018194 #21	ENSHGLG00000017856 #22	ENSHGLG00000045316	ENSHGLG00000032284 #35	ENSHGLG00000019586 #35	ENSHGLG00000039046	ENSHGLG00000000920	GATA2 (ENSHGLG00000000985)	DNAJB8 (ENSHGLG00000046802)	ENSHGLG00000037886	ENSHGLG00000000094	ENSHGLG00000000122	ENSHGLG00000002369 #29	HRH1 (ENSHGLG00000044045)	ENSHGLG00000045274 #32	ENSHGLG00000000350 #33	ENSHGLG00000041351
Sciuridae	ANCESTRAL SPECIES	41	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a	ENSGT00940000159835
Marmotini	ANCESTRAL SPECIES	49	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00960000190360	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a
Marmotini_b	ANCESTRAL SPECIES	62	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000160900 #11	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.a #16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000160690	ENSGT00960000190360	ENSGT00940000156027 #32	ENSGT00940000157569 #33	ENSGT00940000161461 #34	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616.c.a
Arctic ground squirrel	MODERN SPECIES	23	RBSN (ENSUPAG00010000555)	TRH (ENSUPAG00010000545)	TMCC1 (ENSUPAG00010000491)	PLXND1 (ENSUPAG00010000023) #10	H1-8 (ENSUPAG00010023069) #11	RHO (ENSUPAG00010023066) #12	IFT122 (ENSUPAG00010023058) #13	ENSUPAG00010023053 #14	ENSUPAG00010023052 #14	EFCAB12 (ENSUPAG00010023049) #15	ENSUPAG00010023046 #16	CAND2 (ENSUPAG00010023044) #17	TMEM40 (ENSUPAG00010023040) #18	RAF1 (ENSUPAG00010023038) #20	MKRN2 (ENSUPAG00010023036) #21	MKRN2OS (ENSUPAG00010023035) #22	TSEN2 (ENSUPAG00010023034) #23	PPARG (ENSUPAG00010023031) #24	TIMP4 (ENSUPAG00010023029) #25	SYN2 (ENSUPAG00010023028) #26	ENSUPAG00010023027 #28	VGLL4 (ENSUPAG00010023024) #29	ATG7 (ENSUPAG00010023011) #31	HRH1 (ENSUPAG00010023010)	ENSUPAG00010023009	SLC6A1 (ENSUPAG00010023006) #32	SLC6A11 (ENSUPAG00010023004) #33	ATP2B2 (ENSUPAG00010022999) #34	SEC13 (ENSUPAG00010022998)	GHRL (ENSUPAG00010022997)	TATDN2 (ENSUPAG00010022994)
Squirrel	MODERN SPECIES	202	C3orf20 (ENSSTOG00000002907)	FGD5 (ENSSTOG00000005202)	NR2C2 (ENSSTOG00000005250)	MRPS25 (ENSSTOG00000030962)	RBSN (ENSSTOG00000022986)	TRH (ENSSTOG00000026247)	TMCC1 (ENSSTOG00000019869)	PLXND1 (ENSSTOG00000024621) #10	RHO (ENSSTOG00000028352) #12	IFT122 (ENSSTOG00000004353) #13	MBD4 (ENSSTOG00000020663) #14	ENSSTOG00000026505 #16	CAND2 (ENSSTOG00000023136) #17	RAF1 (ENSSTOG00000025146) #20	MKRN2 (ENSSTOG00000010520) #21	MKRN2OS (ENSSTOG00000031428) #22	TSEN2 (ENSSTOG00000000538) #23	PPARG (ENSSTOG00000012778) #24	SYN2 (ENSSTOG00000011519) #26	TIMP4 (ENSSTOG00000034531) #25	ENSSTOG00000028589	VGLL4 (ENSSTOG00000025247) #29	ATG7 (ENSSTOG00000015288) #31	HRH1 (ENSSTOG00000015286)	SLC6A1 (ENSSTOG00000007598) #32	SLC6A11 (ENSSTOG00000028999) #33	ATP2B2 (ENSSTOG00000014026) #34	SEC13 (ENSSTOG00000014017)	GHRL (ENSSTOG00000022095)	TATDN2 (ENSSTOG00000013999)	IRAK2 (ENSSTOG00000013972)
Alpin marmot	MODERN SPECIES	40	MRPS25 (ENSMMMG00000011452)	RBSN (ENSMMMG00000011435)	TRH (ENSMMMG00000011424)	TMCC1 (ENSMMMG00000011365)	ENSMMMG00000011319 #10	ENSMMMG00000011299 #11	RHO (ENSMMMG00000011272) #12	IFT122 (ENSMMMG00000011068) #13	MBD4 (ENSMMMG00000011043) #14	EFCAB12 (ENSMMMG00000011023) #15	ENSMMMG00000010997 #16	ENSMMMG00000010993 #17	RAF1 (ENSMMMG00000010957) #20	ENSMMMG00000010950	MKRN2 (ENSMMMG00000010927) #21	MKRN2OS (ENSMMMG00000010915) #22	ENSMMMG00000010907 #23	ENSMMMG00000010899 #23	PPARG (ENSMMMG00000010840) #24	ENSMMMG00000010687 #25	SYN2 (ENSMMMG00000010440) #26	TAMM41 (ENSMMMG00000010322) #28	VGLL4 (ENSMMMG00000010304) #29	ATG7 (ENSMMMG00000009966) #31	ENSMMMG00000009925	HRH1 (ENSMMMG00000009921)	ENSMMMG00000009895	SLC6A1 (ENSMMMG00000009856) #32	SLC6A11 (ENSMMMG00000009836) #33	ATP2B2 (ENSMMMG00000009587) #34	SEC13 (ENSMMMG00000009563)
Eurasian red squirrel	MODERN SPECIES	10	RBSN (ENSSVLG00005018031)	TRH (ENSSVLG00005018181)	ENSSVLG00005018231	TMCC1 (ENSSVLG00005018250)	PLXND1 (ENSSVLG00005018384) #10	ENSSVLG00005018771 #11	RHO (ENSSVLG00005018827) #12	IFT122 (ENSSVLG00005018941) #13	MBD4 (ENSSVLG00005019308) #14	EFCAB12 (ENSSVLG00005019404) #15	ENSSVLG00005019450 ##16	CAND2 (ENSSVLG00005019570) #17	TMEM40 (ENSSVLG00005019760) #18	ENSSVLG00005019978 #20	MKRN2 (ENSSVLG00005020340) #21	MKRN2OS (ENSSVLG00005020454) #22	TSEN2 (ENSSVLG00005020543) #23	PPARG (ENSSVLG00005020780) #24	SYN2 (ENSSVLG00005021130) #26	TIMP4 (ENSSVLG00005021374) #25	TAMM41 (ENSSVLG00005021448) #28	ENSSVLG00005021494	VGLL4 (ENSSVLG00005021566) #29	ATG7 (ENSSVLG00005021683) #31	HRH1 (ENSSVLG00005021749)	SLC6A1 (ENSSVLG00005021844) #32	SLC6A11 (ENSSVLG00005022396) #33	ATP2B2 (ENSSVLG00005022802) #34	SEC13 (ENSSVLG00005023877)	GHRL (ENSSVLG00005023970)	TATDN2 (ENSSVLG00005024031)
Lagomorpha	ANCESTRAL SPECIES	105	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189	ENSGT01020000230394.e.b.a #10	ENSGT00940000175447	ENSGT01030000234549.a.a.a.a.a.b.b #12	ENSGT00390000001016.b #13	ENSGT00530000063687.a #14	ENSGT00390000014874 #15	ENSGT00940000153973.c.a.b.b ##16	ENSGT00390000017740.a.b #17	ENSGT00390000017530 #18	ENSGT00940000156084 #20	ENSGT00950000183077.a.b #21	ENSGT00390000003839 #22	ENSGT00390000013266 #23	ENSGT00940000158273 #24	ENSGT00940000159798 #25	ENSGT00940000156062 #26	ENSGT00390000000616 #28	ENSGT00390000003282.B #29	ENSGT00390000017509 #31	ENSGT00940000156027 #32	ENSGT00940000157569 #33
Rabbit	MODERN SPECIES	20	MRPS25 (ENSOCUG00000006984)	RBSN (ENSOCUG00000006988)	TRH (ENSOCUG00000006337)	TMCC1 (ENSOCUG00000013071)	PLXND1 (ENSOCUG00000013049) #10	ENSOCUG00000029379	RHO (ENSOCUG00000013036) #12	IFT122 (ENSOCUG00000013015) #13	MBD4 (ENSOCUG00000013006) #14	ENSOCUG00000012999 #15	ENSOCUG00000023407 ##16	CAND2 (ENSOCUG00000009266) #17	ENSOCUG00000031173 #18	RAF1 (ENSOCUG00000014175) #20	MKRN2 (ENSOCUG00000014171) #21	MKRN2OS (ENSOCUG00000033126) #22	TSEN2 (ENSOCUG00000013203) #23	PPARG (ENSOCUG00000013194) #24	ENSOCUG00000015932 #26	TIMP4 (ENSOCUG00000015952) #25	VGLL4 (ENSOCUG00000001911) #29	ATG7 (ENSOCUG00000001908) #31	ENSOCUG00000025657 #32	SLC6A11 (ENSOCUG00000001627) #33	LZTFL1 (ENSOCUG00000010140)	SLC6A20 (ENSOCUG00000004216)	SACM1L (ENSOCUG00000026080)	LIMD1 (ENSOCUG00000001984)	ENSOCUG00000024922	LARS2 (ENSOCUG00000001964)	CDCP1 (ENSOCUG00000006910)