Theria	ANCESTRAL SPECIES	38	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000165452.b	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Euarchontoglires	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Euarchontoglires_A	ANCESTRAL SPECIES	25	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Glires	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Rodentia	ANCESTRAL SPECIES	21	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Myomorpha	ANCESTRAL SPECIES	29	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Muroidea	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Murinae	ANCESTRAL SPECIES	16	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Rat	MODERN SPECIES	6	Kctd9 (ENSRNOG00000012951) #7	Gnrh1 (ENSRNOG00000013433) #8	Dock5 (ENSRNOG00000024703) #9	LOC120097172 (ENSRNOG00000031532) #10	Nefl (ENSRNOG00000013658) #11	Nefm (ENSRNOG00000013916) #12	Adam7 (ENSRNOG00000014054) #13	Adamdec1 (ENSRNOG00000030724) #14	Adam28 (ENSRNOG00000014518) #15	ENSRNOG00000063586 #16	AABR07018269.1 (ENSRNOG00000031720) #17	ENSRNOG00000063939 #18	ENSRNOG00000067366 #19	Stc1 (ENSRNOG00000015075) #20	Nkx2-6 (ENSRNOG00000021910) #21	Nkx3-1 (ENSRNOG00000015477) #22	Slc25a37 (ENSRNOG00000015495) #23	Synb (ENSRNOG00000021823) #24	Entpd4 (ENSRNOG00000016321) #25	Loxl2 (ENSRNOG00000016758) #26	R3hcc1 (ENSRNOG00000016777) #27	Chmp7 (ENSRNOG00000016939) #28	Tnfrsf10b (ENSRNOG00000038483) #29	Rhobtb2 (ENSRNOG00000017373) #30	Pebp4 (ENSRNOG00000026247) #31	Egr3 (ENSRNOG00000017828) #32	Bin3 (ENSRNOG00000018023) #33	Ccar2 (ENSRNOG00000018295) #34	C15h8orf58 (ENSRNOG00000008351) #35	Pdlim2 (ENSRNOG00000008543) #36	Sorbs3 (ENSRNOG00000008829) #37
Mus	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Mus_A	ANCESTRAL SPECIES	12	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a.y	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Mus_B	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a.y	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Mus_C	ANCESTRAL SPECIES	20	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a.y	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Steppe mouse	MODERN SPECIES	3084				Cdca2 (ENSMSIG00000023962)	Kctd9 (ENSMSIG00000024015) #7	ENSMSIG00000024123	Dock5 (ENSMSIG00000024135) #9	Nefl (ENSMSIG00000024282) #11	ENSMSIG00000024304 #12	Adam7 (ENSMSIG00000024335) #13	Adamdec1 (ENSMSIG00000024360) #14	Adam28 (ENSMSIG00000024389) #16	Stc1 (ENSMSIG00000024577) #20	ENSMSIG00000024592	Nkx2-6 (ENSMSIG00000024600) #21	Nkx3-1 (ENSMSIG00000024609) #22	Slc25a37 (ENSMSIG00000024616) #23	ENSMSIG00000024627 #24	ENSMSIG00000024639 #25	Loxl2 (ENSMSIG00000024664) #26	R3hcc1 (ENSMSIG00000024698) #27	Chmp7 (ENSMSIG00000024716) #28	ENSMSIG00000024730	Tnfrsf10b (ENSMSIG00000024749) #29	Rhobtb2 (ENSMSIG00000024755) #30	ENSMSIG00000024803	ENSMSIG00000024806
spretus	MODERN SPECIES	5	Pnma2 (MGP_SPRETEiJ_G0020336)	Bnip3l (MGP_SPRETEiJ_G0020337)	Ppp2r2a (MGP_SPRETEiJ_G0020338)	Ebf2 (MGP_SPRETEiJ_G0020339)	Cdca2 (MGP_SPRETEiJ_G0020340)	Kctd9 (MGP_SPRETEiJ_G0020341) #7	Gnrh1 (MGP_SPRETEiJ_G0020342)	Dock5 (MGP_SPRETEiJ_G0020343) #9	Nefm (MGP_SPRETEiJ_G0020344)	Nefl (MGP_SPRETEiJ_G0020345) #11	Adam7 (MGP_SPRETEiJ_G0020346) #13	Adamdec1 (MGP_SPRETEiJ_G0020347) #14	Adam28 (MGP_SPRETEiJ_G0020348) #16	Stc1 (MGP_SPRETEiJ_G0020349) #20	Nkx2-6 (MGP_SPRETEiJ_G0020350) #21	Nkx3-1 (MGP_SPRETEiJ_G0020351) #22	Slc25a37 (MGP_SPRETEiJ_G0020352) #23	MGP_SPRETEiJ_G0020354 #24	MGP_SPRETEiJ_G0020355 #24	MGP_SPRETEiJ_G0020356 #25	MGP_SPRETEiJ_G0020357 #25	Loxl2 (MGP_SPRETEiJ_G0020358) #26	R3hcc1 (MGP_SPRETEiJ_G0020359) #27	Chmp7 (MGP_SPRETEiJ_G0020360) #28	Tnfrsf10b (MGP_SPRETEiJ_G0020361) #29	Rhobtb2 (MGP_SPRETEiJ_G0020362) #30	Pebp4 (MGP_SPRETEiJ_G0020363) #31	Egr3 (MGP_SPRETEiJ_G0020364) #32	Bin3 (MGP_SPRETEiJ_G0020365) #33	Ccar2 (MGP_SPRETEiJ_G0020366) #34	9930012K11Rik (MGP_SPRETEiJ_G0020367) #35
Mouse	MODERN SPECIES	5	Pnma2 (ENSMUSG00000046204)	Bnip3l (ENSMUSG00000022051)	Ppp2r2a (ENSMUSG00000022052)	Ebf2 (ENSMUSG00000022053)	Cdca2 (ENSMUSG00000048922)	Kctd9 (ENSMUSG00000034327) #7	Gnrh1 (ENSMUSG00000015812)	Dock5 (ENSMUSG00000044447) #9	Nefm (ENSMUSG00000022054)	Nefl (ENSMUSG00000022055) #11	Adam7 (ENSMUSG00000022056) #13	Adamdec1 (ENSMUSG00000022057) #14	Adam28 (ENSMUSG00000014725) #16	Stc1 (ENSMUSG00000014813) #20	Nkx2-6 (ENSMUSG00000044186) #21	Nkx3-1 (ENSMUSG00000022061) #22	Slc25a37 (ENSMUSG00000034248) #23	Synb (ENSMUSG00000047977) #24	Entpd4 (ENSMUSG00000095463) #25	Gm16867 (ENSMUSG00000093954)	Gm27179 (ENSMUSG00000098773) #24	Entpd4b (ENSMUSG00000022066) #25	Loxl2 (ENSMUSG00000034205) #26	R3hcc1 (ENSMUSG00000034194) #27	Chmp7 (ENSMUSG00000034190) #28	Tnfrsf10b (ENSMUSG00000022074) #29	Rhobtb2 (ENSMUSG00000022075) #30	Pebp4 (ENSMUSG00000022085) #31	Egr3 (ENSMUSG00000033730) #32	Bin3 (ENSMUSG00000022089) #33	Ccar2 (ENSMUSG00000033712) #34
Ryukyu mouse	MODERN SPECIES	5	Pnma2 (MGP_CAROLIEiJ_G0019444)	Bnip3l (MGP_CAROLIEiJ_G0019445)	MGP_CAROLIEiJ_G0019446	Ebf2 (MGP_CAROLIEiJ_G0019447)	Cdca2 (MGP_CAROLIEiJ_G0019448)	Kctd9 (MGP_CAROLIEiJ_G0019449) #7	Gnrh1 (MGP_CAROLIEiJ_G0019450)	Dock5 (MGP_CAROLIEiJ_G0019451) #9	Nefm (MGP_CAROLIEiJ_G0019452)	Nefl (MGP_CAROLIEiJ_G0019453) #11	Adam7 (MGP_CAROLIEiJ_G0019454) #13	Adamdec1 (MGP_CAROLIEiJ_G0019455) #14	Adam28 (MGP_CAROLIEiJ_G0019456) #16	Stc1 (MGP_CAROLIEiJ_G0019457) #20	Nkx2-6 (MGP_CAROLIEiJ_G0019458) #21	Nkx3-1 (MGP_CAROLIEiJ_G0019459) #22	Slc25a37 (MGP_CAROLIEiJ_G0019460) #23	MGP_CAROLIEiJ_G0019461	MGP_CAROLIEiJ_G0019462 #24	MGP_CAROLIEiJ_G0019463 #24	MGP_CAROLIEiJ_G0019464 #25	MGP_CAROLIEiJ_G0019465 #25	Loxl2 (MGP_CAROLIEiJ_G0019466) #26	R3hcc1 (MGP_CAROLIEiJ_G0019467) #27	Chmp7 (MGP_CAROLIEiJ_G0019468) #28	MGP_CAROLIEiJ_G0019469 #29	Rhobtb2 (MGP_CAROLIEiJ_G0019470) #30	Pebp4 (MGP_CAROLIEiJ_G0019471) #31	Egr3 (MGP_CAROLIEiJ_G0019472) #32	Bin3 (MGP_CAROLIEiJ_G0019473) #33	Ccar2 (MGP_CAROLIEiJ_G0019474) #34
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0030460	Bnip3l (MGP_PahariEiJ_G0030462)	Ppp2r2a (MGP_PahariEiJ_G0030463)	Ebf2 (MGP_PahariEiJ_G0030464)	Cdca2 (MGP_PahariEiJ_G0030465)	Kctd9 (MGP_PahariEiJ_G0030466) #7	Gnrh1 (MGP_PahariEiJ_G0030467)	Dock5 (MGP_PahariEiJ_G0030468) #9	Nefm (MGP_PahariEiJ_G0030469)	Nefl (MGP_PahariEiJ_G0030470) #11	Adam7 (MGP_PahariEiJ_G0030471) #13	Adamdec1 (MGP_PahariEiJ_G0030472) #14	Adam28 (MGP_PahariEiJ_G0030473) #16	Stc1 (MGP_PahariEiJ_G0030474) #20	MGP_PahariEiJ_G0030475 #21	Nkx3-1 (MGP_PahariEiJ_G0030476) #22	Slc25a37 (MGP_PahariEiJ_G0030477) #23	MGP_PahariEiJ_G0030478	MGP_PahariEiJ_G0030479 #24	MGP_PahariEiJ_G0030480 #24	MGP_PahariEiJ_G0030481 #25	MGP_PahariEiJ_G0030482 #25	Loxl2 (MGP_PahariEiJ_G0030483) #26	R3hcc1 (MGP_PahariEiJ_G0030484) #27	Chmp7 (MGP_PahariEiJ_G0030485) #28	MGP_PahariEiJ_G0030486 #29	Rhobtb2 (MGP_PahariEiJ_G0030487) #30	Pebp4 (MGP_PahariEiJ_G0030488) #31	Egr3 (MGP_PahariEiJ_G0030489) #32	Bin3 (MGP_PahariEiJ_G0030490) #33	Ccar2 (MGP_PahariEiJ_G0030491) #34
Cricetidae	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Cricetinae	ANCESTRAL SPECIES	18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Chinese hamster chok1gshd	MODERN SPECIES	3	Pnma2 (ENSCGRG00001010753)	Bnip3l (ENSCGRG00001021504)	Ppp2r2a (ENSCGRG00001015307)	Ebf2 (ENSCGRG00001001432)	Cdca2 (ENSCGRG00001022349)	Kctd9 (ENSCGRG00001022797) #7	Gnrh1 (ENSCGRG00001000327)	Dock5 (ENSCGRG00001021195) #9	Nefl (ENSCGRG00001016408) #11	ENSCGRG00001011263 #12	Adam7 (ENSCGRG00001010547) #13	Adamdec1 (ENSCGRG00001013228) #14	Adam28 (ENSCGRG00001009338) #16	Stc1 (ENSCGRG00001019183) #20	Nkx2-6 (ENSCGRG00001007878) #21	Nkx3-1 (ENSCGRG00001019912) #22	Slc25a37 (ENSCGRG00001008508) #23	Synb (ENSCGRG00001011259) #24	ENSCGRG00001018845 #25	Loxl2 (ENSCGRG00001000163) #26	R3hcc1 (ENSCGRG00001014977) #27	Chmp7 (ENSCGRG00001021741) #28	Rhobtb2 (ENSCGRG00001023228) #30	Egr3 (ENSCGRG00001009879) #32	Bin3 (ENSCGRG00001014908) #33	Ccar2 (ENSCGRG00001010031) #34	9930012K11Rik (ENSCGRG00001022180) #35	Pdlim2 (ENSCGRG00001018717) #36	Sorbs3 (ENSCGRG00001019180) #37	Ppp3cc (ENSCGRG00001021761)	Slc39a14 (ENSCGRG00001020763)
Golden Hamster	MODERN SPECIES	642												Adamdec1 (ENSMAUG00000021097) #14	Adam28 (ENSMAUG00000012592) #16	ENSMAUG00000020290 #20	Nkx2-6 (ENSMAUG00000002996) #21	Nkx3-1 (ENSMAUG00000020666) #22	Slc25a37 (ENSMAUG00000013175) #23	ENSMAUG00000012065 #25	Loxl2 (ENSMAUG00000019178) #26	R3hcc1 (ENSMAUG00000016096) #27	Chmp7 (ENSMAUG00000017878) #28	Rhobtb2 (ENSMAUG00000003682) #30	Pebp4 (ENSMAUG00000012682) #31	Egr3 (ENSMAUG00000000747) #32	Bin3 (ENSMAUG00000013983) #33	Ccar2 (ENSMAUG00000011127) #34	9930012K11Rik (ENSMAUG00000021973) #35	Pdlim2 (ENSMAUG00000019610) #36	Sorbs3 (ENSMAUG00000021963) #37	Ppp3cc (ENSMAUG00000000668)	Slc39a14 (ENSMAUG00000018755)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j #29	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Northern American deer mouse	MODERN SPECIES	22	Ppp2r2a (ENSPEMG00000022593)	Ebf2 (ENSPEMG00000007776)	Cdca2 (ENSPEMG00000021129)	Kctd9 (ENSPEMG00000020895) #7	Gnrh1 (ENSPEMG00000030807)	Dock5 (ENSPEMG00000023361) #9	Nefl (ENSPEMG00000020765) #11	Nefm (ENSPEMG00000020646)	Adam7 (ENSPEMG00000012803) #13	Adamdec1 (ENSPEMG00000004402) #14	Adam28 (ENSPEMG00000015520) #16	ENSPEMG00000030090	ENSPEMG00000027026	Stc1 (ENSPEMG00000027424) #20	Nkx2-6 (ENSPEMG00000005851) #21	Nkx3-1 (ENSPEMG00000026785) #22	Slc25a37 (ENSPEMG00000017275) #23	Synb (ENSPEMG00000024700) #24	ENSPEMG00000018234 #25	Loxl2 (ENSPEMG00000016856) #26	R3hcc1 (ENSPEMG00000007118) #27	ENSPEMG00000028382 #28	ENSPEMG00000029378 #29	Rhobtb2 (ENSPEMG00000001035) #30	Pebp4 (ENSPEMG00000001033) #31	Egr3 (ENSPEMG00000024575) #32	Bin3 (ENSPEMG00000015277) #33	Ccar2 (ENSPEMG00000009116) #34	9930012K11Rik (ENSPEMG00000016741) #35	Pdlim2 (ENSPEMG00000011746) #36	Sorbs3 (ENSPEMG00000019062) #37
Prairie vole	MODERN SPECIES	4	ENSMOCG00000018617	Ppp2r2a (ENSMOCG00000011317)	ENSMOCG00000005189	Ebf2 (ENSMOCG00000007295)	Cdca2 (ENSMOCG00000002388)	Kctd9 (ENSMOCG00000016913) #7	Gnrh1 (ENSMOCG00000003491)	Dock5 (ENSMOCG00000009188) #9	Nefl (ENSMOCG00000012988) #11	ENSMOCG00000009013 #12	Adam7 (ENSMOCG00000022709) #13	Adamdec1 (ENSMOCG00000021493) #14	Adam28 (ENSMOCG00000010153) #16	Stc1 (ENSMOCG00000003351) #20	Nkx2-6 (ENSMOCG00000002130) #21	Nkx3-1 (ENSMOCG00000001078) #22	Slc25a37 (ENSMOCG00000000710) #23	Synb (ENSMOCG00000018779) #24	ENSMOCG00000021822 #25	Loxl2 (ENSMOCG00000021272) #26	R3hcc1 (ENSMOCG00000018508) #27	Chmp7 (ENSMOCG00000015254) #28	ENSMOCG00000011818	Cenpj (ENSMOCG00000006479)	Parp4 (ENSMOCG00000016582)	ENSMOCG00000009441	Pspc1 (ENSMOCG00000006060)	Zmym5 (ENSMOCG00000001655)	Zmym2 (ENSMOCG00000019626)	Gja3 (ENSMOCG00000016618)	Gjb2 (ENSMOCG00000016041)
Upper Galilee mountains blind mole rat	MODERN SPECIES	487									Nefl (ENSNGAG00000006739) #11	ENSNGAG00000006331	Adam7 (ENSNGAG00000023201) #13	Adamdec1 (ENSNGAG00000018142) #14	Adam28 (ENSNGAG00000007193) #16	Stc1 (ENSNGAG00000023141) #20	Nkx2-6 (ENSNGAG00000022732) #21	Nkx3-1 (ENSNGAG00000021847) #22	Slc25a37 (ENSNGAG00000016465) #23	ENSNGAG00000004016	ENSNGAG00000020742 #25	Loxl2 (ENSNGAG00000022939) #26	R3hcc1 (ENSNGAG00000016747) #27	Chmp7 (ENSNGAG00000015842) #28	Rhobtb2 (ENSNGAG00000014537) #30	Egr3 (ENSNGAG00000014204) #32	Bin3 (ENSNGAG00000012258) #33	Ccar2 (ENSNGAG00000009598) #34	9930012K11Rik (ENSNGAG00000010379) #35	Pdlim2 (ENSNGAG00000007929) #36	Sorbs3 (ENSNGAG00000015206) #37	Ppp3cc (ENSNGAG00000013527)	Slc39a14 (ENSNGAG00000018684)
Lesser Egyptian jerboa	MODERN SPECIES	125	Dpysl2 (ENSJJAG00000021965)	ENSJJAG00000021430	Ppp2r2a (ENSJJAG00000020800)	Ebf2 (ENSJJAG00000018635)	ENSJJAG00000016051	Kctd9 (ENSJJAG00000014248) #7	Gnrh1 (ENSJJAG00000013753)	Dock5 (ENSJJAG00000012658) #9	Nefl (ENSJJAG00000011034) #11	Nefm (ENSJJAG00000018709)	Adam7 (ENSJJAG00000016655) #13	Adamdec1 (ENSJJAG00000015285) #14	Adam28 (ENSJJAG00000014433) #16	Stc1 (ENSJJAG00000013494) #20	Nkx2-6 (ENSJJAG00000013412) #21	Nkx3-1 (ENSJJAG00000013332) #22	ENSJJAG00000012211	Slc25a37 (ENSJJAG00000012106) #23	ENSJJAG00000010447 #25	Loxl2 (ENSJJAG00000009230) #26	R3hcc1 (ENSJJAG00000013075) #27	Chmp7 (ENSJJAG00000012284) #28	ENSJJAG00000011797	Rhobtb2 (ENSJJAG00000010580) #30	Egr3 (ENSJJAG00000010434) #32	Bin3 (ENSJJAG00000010054) #33	Ccar2 (ENSJJAG00000006864) #34	9930012K11Rik (ENSJJAG00000002660) #35	Pdlim2 (ENSJJAG00000022305) #36	Sorbs3 (ENSJJAG00000020896) #37	Ppp3cc (ENSJJAG00000000657)
Kangaroo rat	MODERN SPECIES	506	Dpysl2 (ENSDORG00000023604)	Pnma2 (ENSDORG00000009340)	Bnip3l (ENSDORG00000028719)	Ppp2r2a (ENSDORG00000019723)	Ebf2 (ENSDORG00000019864)	ENSDORG00000007254	Kctd9 (ENSDORG00000007253) #7	Gnrh1 (ENSDORG00000007251)	Dock5 (ENSDORG00000012003) #9	Nefl (ENSDORG00000025560) #11	ENSDORG00000027287	Adam7 (ENSDORG00000007281) #13	Adamdec1 (ENSDORG00000007279) #14	Adam28 (ENSDORG00000001473) #16	Stc1 (ENSDORG00000023767) #20	ENSDORG00000024859 #22	Slc25a37 (ENSDORG00000026005) #23	ENSDORG00000008983 #25	Loxl2 (ENSDORG00000011153) #26	R3hcc1 (ENSDORG00000026365) #27	Chmp7 (ENSDORG00000007264) #28	Rhobtb2 (ENSDORG00000004193) #30	Egr3 (ENSDORG00000000937) #32	Bin3 (ENSDORG00000000935) #33	Ccar2 (ENSDORG00000000934) #34	9930012K11Rik (ENSDORG00000000932) #35	ENSDORG00000002868 #36	Sorbs3 (ENSDORG00000002089) #37	Ppp3cc (ENSDORG00000002086)	Slc39a14 (ENSDORG00000002085)	Piwil2 (ENSDORG00000011177)
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.j #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Marmotini	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.j #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000159453.e.b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Marmotini_b	ANCESTRAL SPECIES	87										ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000159453.e.b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Arctic ground squirrel	MODERN SPECIES	186										ADAM7 (ENSUPAG00010017328) #13	ADAMDEC1 (ENSUPAG00010017356) #14	ADAM28 (ENSUPAG00010017386) #16	ENSUPAG00010017423	STC1 (ENSUPAG00010017427) #20	NKX2-6 (ENSUPAG00010017433) #21	NKX3-1 (ENSUPAG00010017442) #22	SLC25A37 (ENSUPAG00010017448) #23	ENTPD4 (ENSUPAG00010017458) #25	LOXL2 (ENSUPAG00010017498) #26	R3HCC1 (ENSUPAG00010017502) #27	CHMP7 (ENSUPAG00010017507) #28	ENSUPAG00010017525	RHOBTB2 (ENSUPAG00010017538) #30	PEBP4 (ENSUPAG00010017546) #31	EGR3 (ENSUPAG00010017554) #32	BIN3 (ENSUPAG00010017563) #33	CCAR2 (ENSUPAG00010017585) #34	C8orf58 (ENSUPAG00010017613) #35	PDLIM2 (ENSUPAG00010017621) #36	SORBS3 (ENSUPAG00010017635) #37	PPP3CC (ENSUPAG00010017686)
Squirrel	MODERN SPECIES	155											ADAM7 (ENSSTOG00000012955) #13	ADAMDEC1 (ENSSTOG00000032677) #14	ADAM28 (ENSSTOG00000006248) #16	STC1 (ENSSTOG00000007507) #20	NKX2-6 (ENSSTOG00000025482) #21	NKX3-1 (ENSSTOG00000029597) #22	SLC25A37 (ENSSTOG00000025533) #23	ENTPD4 (ENSSTOG00000015892) #25	LOXL2 (ENSSTOG00000015878) #26	R3HCC1 (ENSSTOG00000027130) #27	CHMP7 (ENSSTOG00000015867) #28	ENSSTOG00000001440	RHOBTB2 (ENSSTOG00000029109) #30	PEBP4 (ENSSTOG00000032426) #31	EGR3 (ENSSTOG00000021065) #32	BIN3 (ENSSTOG00000011677) #33	CCAR2 (ENSSTOG00000011666) #34	C8orf58 (ENSSTOG00000021866) #35	PDLIM2 (ENSSTOG00000024161) #36	SORBS3 (ENSSTOG00000011660) #37	PPP3CC (ENSSTOG00000028936)
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005003080	EBF2 (ENSSVLG00005003172)	CDCA2 (ENSSVLG00005003275)	KCTD9 (ENSSVLG00005003331) #7	GNRH1 (ENSSVLG00005003367)	DOCK5 (ENSSVLG00005003397) #9	ENSSVLG00005003428	ENSSVLG00005003443	NEFL (ENSSVLG00005003461) #11	NEFM (ENSSVLG00005003494) #12	ADAM7 (ENSSVLG00005003562) #13	ADAMDEC1 (ENSSVLG00005003660) #14	ADAM28 (ENSSVLG00005003701) #16	STC1 (ENSSVLG00005003730) #20	NKX2-6 (ENSSVLG00005003752) #21	NKX3-1 (ENSSVLG00005003772) #22	SLC25A37 (ENSSVLG00005003790) #23	ENTPD4 (ENSSVLG00005003809) #25	LOXL2 (ENSSVLG00005003840) #26	R3HCC1 (ENSSVLG00005003877) #27	CHMP7 (ENSSVLG00005003902) #28	RHOBTB2 (ENSSVLG00005003947) #30	PEBP4 (ENSSVLG00005003991) #31	ENSSVLG00005004016	BIN3 (ENSSVLG00005004049) #33	CCAR2 (ENSSVLG00005004079) #34	C8orf58 (ENSSVLG00005004115) #35	PDLIM2 (ENSSVLG00005004159) #36	SORBS3 (ENSSVLG00005004211) #37	ENSSVLG00005004276	SLC39A14 (ENSSVLG00005004424)
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Long-tailed chinchilla	MODERN SPECIES	110	BNIP3L (ENSCLAG00000016223)	PPP2R2A (ENSCLAG00000013984)	EBF2 (ENSCLAG00000013500)	CDCA2 (ENSCLAG00000011981)	KCTD9 (ENSCLAG00000013948) #7	GNRH1 (ENSCLAG00000014234)	DOCK5 (ENSCLAG00000015174) #9	NEFL (ENSCLAG00000014935) #11	ENSCLAG00000013799	ADAM7 (ENSCLAG00000013174) #13	ENSCLAG00000015375 #14	ADAM28 (ENSCLAG00000016310) #16	ENSCLAG00000015807	STC1 (ENSCLAG00000014786) #20	NKX2-6 (ENSCLAG00000014720) #21	NKX3-1 (ENSCLAG00000013957) #22	SLC25A37 (ENSCLAG00000014235) #23	ENTPD4 (ENSCLAG00000013899) #25	LOXL2 (ENSCLAG00000016283) #26	R3HCC1 (ENSCLAG00000015556) #27	CHMP7 (ENSCLAG00000015529) #28	ENSCLAG00000013896	RHOBTB2 (ENSCLAG00000014037) #30	PEBP4 (ENSCLAG00000015116) #31	EGR3 (ENSCLAG00000016373) #32	BIN3 (ENSCLAG00000016398) #33	CCAR2 (ENSCLAG00000014299) #34	C8orf58 (ENSCLAG00000014186) #35	ENSCLAG00000014272 #36	SORBS3 (ENSCLAG00000014309) #37	PPP3CC (ENSCLAG00000015203)
Degu	MODERN SPECIES	77	ENSODEG00000007854	EBF2 (ENSODEG00000007640)	ENSODEG00000006905	ENSODEG00000007418	KCTD9 (ENSODEG00000008616) #7	GNRH1 (ENSODEG00000007834)	DOCK5 (ENSODEG00000007523) #9	NEFL (ENSODEG00000007183) #11	NEFM (ENSODEG00000008392) #12	ENSODEG00000007521	ADAM7 (ENSODEG00000007547) #13	ADAMDEC1 (ENSODEG00000008034) #14	ADAM28 (ENSODEG00000007875) #16	STC1 (ENSODEG00000007382) #20	NKX2-6 (ENSODEG00000007413) #21	NKX3-1 (ENSODEG00000007004) #22	SLC25A37 (ENSODEG00000007363) #23	ENTPD4 (ENSODEG00000009788) #25	ENSODEG00000009404	LOXL2 (ENSODEG00000006938) #26	R3HCC1 (ENSODEG00000007529) #27	ENSODEG00000019474	ENSODEG00000007294 #28	RHOBTB2 (ENSODEG00000007111) #30	ENSODEG00000008725	EGR3 (ENSODEG00000007442) #32	BIN3 (ENSODEG00000006965) #33	CCAR2 (ENSODEG00000008466) #34	C8orf58 (ENSODEG00000006637) #35	PDLIM2 (ENSODEG00000006028) #36	SORBS3 (ENSODEG00000007179) #37
Guinea pig	MODERN SPECIES	1	ADRA1A (ENSCPOG00000038399)	DPYSL2 (ENSCPOG00000025679)	BNIP3L (ENSCPOG00000034680)	PPP2R2A (ENSCPOG00000026784)	EBF2 (ENSCPOG00000001463)	CDCA2 (ENSCPOG00000036890)	KCTD9 (ENSCPOG00000015540) #7	GNRH1 (ENSCPOG00000015538)	DOCK5 (ENSCPOG00000015533) #9	NEFL (ENSCPOG00000023838) #11	ENSCPOG00000027410	ADAM7 (ENSCPOG00000001538) #13	ADAMDEC1 (ENSCPOG00000038140) #14	ADAM28 (ENSCPOG00000009707) #16	STC1 (ENSCPOG00000034351) #20	NKX3-1 (ENSCPOG00000040229) #22	SLC25A37 (ENSCPOG00000035237) #23	ENTPD4 (ENSCPOG00000009705) #25	LOXL2 (ENSCPOG00000009701) #26	R3HCC1 (ENSCPOG00000009696) #27	CHMP7 (ENSCPOG00000002456) #28	RHOBTB2 (ENSCPOG00000039763) #30	PEBP4 (ENSCPOG00000015616) #31	EGR3 (ENSCPOG00000038322) #32	BIN3 (ENSCPOG00000010994) #33	CCAR2 (ENSCPOG00000010985) #34	C8orf58 (ENSCPOG00000039428) #35	ENSCPOG00000020871 #36	SORBS3 (ENSCPOG00000001115) #37	PPP3CC (ENSCPOG00000001113)	SLC39A14 (ENSCPOG00000001112)
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000036572	ENSHGLG00000018824 #7	GNRH1 (ENSHGLG00000017902)	DOCK5 (ENSHGLG00000017514) #9	ENSHGLG00000050046	NEFL (ENSHGLG00000017653) #11	ENSHGLG00000019352	ENSHGLG00000036278	ADAM7 (ENSHGLG00000017673) #13	ADAMDEC1 (ENSHGLG00000011872) #14	ADAM28 (ENSHGLG00000018858) #16	ENSHGLG00000040240	STC1 (ENSHGLG00000040196) #20	NKX2-6 (ENSHGLG00000014624) #21	ENSHGLG00000044875	NKX3-1 (ENSHGLG00000049073) #22	SLC25A37 (ENSHGLG00000036264) #23	ENSHGLG00000032907	ENSHGLG00000010644 #25	LOXL2 (ENSHGLG00000012019) #26	R3HCC1 (ENSHGLG00000010517) #27	ENSHGLG00000009513 #28	ENSHGLG00000032756	RHOBTB2 (ENSHGLG00000016441) #30	ENSHGLG00000049596	PEBP4 (ENSHGLG00000042512) #31	EGR3 (ENSHGLG00000040205) #32	BIN3 (ENSHGLG00000014664) #33	CCAR2 (ENSHGLG00000015483) #34	ENSHGLG00000010238 #35	PDLIM2 (ENSHGLG00000007806) #36
Lagomorpha	ANCESTRAL SPECIES	60	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25
Rabbit	MODERN SPECIES	11	EBF2 (ENSOCUG00000011972)	CDCA2 (ENSOCUG00000014109)	KCTD9 (ENSOCUG00000014099) #7	GNRH1 (ENSOCUG00000014093)	DOCK5 (ENSOCUG00000014056) #9	NEFL (ENSOCUG00000023836) #11	ENSOCUG00000021430	ADAM7 (ENSOCUG00000012104) #13	ADAMDEC1 (ENSOCUG00000001597) #14	ADAM28 (ENSOCUG00000004176) #16	ENSOCUG00000032289	ENSOCUG00000037834	ENSOCUG00000033833	STC1 (ENSOCUG00000005708) #20	NKX2-6 (ENSOCUG00000004296) #21	NKX3-1 (ENSOCUG00000004294) #22	SLC25A37 (ENSOCUG00000004114) #23	ENTPD4 (ENSOCUG00000004102) #25	DDX60 (ENSOCUG00000006355)	ENSOCUG00000029856	PALLD (ENSOCUG00000004900)	CBR4 (ENSOCUG00000006446)	SH3RF1 (ENSOCUG00000003098)	ENSOCUG00000038117	ENSOCUG00000031550	NEK1 (ENSOCUG00000016756)	CLCN3 (ENSOCUG00000006220)	HPF1 (ENSOCUG00000026923)	ENSOCUG00000036380	MFAP3L (ENSOCUG00000011514)	AADAT (ENSOCUG00000011526)
Pika	MODERN SPECIES	1500															ENSOPRG00000003185 #21	NKX3-1 (ENSOPRG00000003179) #22	ENSOPRG00000018999	ENSOPRG00000018477	SLC25A37 (ENSOPRG00000003130) #23	ENSOPRG00000003097 #25
Tree shrew	MODERN SPECIES	7913																ENSTBEG00000002319 #22
Primates	ANCESTRAL SPECIES	25	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b.e	ENSGT00950000182859.A.a.a.b.f	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.a	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Mouse lemur	MODERN SPECIES	12	ENSMICG00000030813	ENSMICG00000043737	ENSMICG00000015774	CDCA2 (ENSMICG00000031889)	KCTD9 (ENSMICG00000016754) #7	GNRH1 (ENSMICG00000037976)	DOCK5 (ENSMICG00000016726) #9	NEFL (ENSMICG00000030432) #11	ENSMICG00000036167	ADAM7 (ENSMICG00000002694) #13	ADAMDEC1 (ENSMICG00000047490) #14	ENSMICG00000034192	ADAM28 (ENSMICG00000042341) #16	STC1 (ENSMICG00000032857) #20	NKX2-6 (ENSMICG00000042062) #21	NKX3-1 (ENSMICG00000011189) #22	SLC25A37 (ENSMICG00000034841) #23	ENTPD4 (ENSMICG00000011165) #25	LOXL2 (ENSMICG00000011154) #26	R3HCC1 (ENSMICG00000011146) #27	CHMP7 (ENSMICG00000011964) #28	ENSMICG00000043513	RHOBTB2 (ENSMICG00000011180) #30	PEBP4 (ENSMICG00000005019) #31	EGR3 (ENSMICG00000029687) #32	BIN3 (ENSMICG00000007768) #33	CCAR2 (ENSMICG00000007751) #34	C8orf58 (ENSMICG00000017355) #35	PDLIM2 (ENSMICG00000003919) #36	SORBS3 (ENSMICG00000003915) #37	PPP3CC (ENSMICG00000001851)
Lemuriformes_a	ANCESTRAL SPECIES	34	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b.e	ENSGT00950000182859.A.a.a.b.f	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.a	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Coquerels sifaka	MODERN SPECIES	919	BNIP3L (ENSPCOG00000026018)	PPP2R2A (ENSPCOG00000023269)	EBF2 (ENSPCOG00000027078)	CDCA2 (ENSPCOG00000023393)	KCTD9 (ENSPCOG00000020414) #7	GNRH1 (ENSPCOG00000024165)	DOCK5 (ENSPCOG00000016268) #9	NEFL (ENSPCOG00000026085) #11	NEFM (ENSPCOG00000022965) #12	ADAM7 (ENSPCOG00000026532) #13	ENSPCOG00000021910 #16	ENSPCOG00000008142	STC1 (ENSPCOG00000019531) #20	ENSPCOG00000026813	NKX2-6 (ENSPCOG00000021761) #21	NKX3-1 (ENSPCOG00000024990) #22	SLC25A37 (ENSPCOG00000028846) #23	ENTPD4 (ENSPCOG00000010184) #25	LOXL2 (ENSPCOG00000022542) #26	R3HCC1 (ENSPCOG00000027554) #27	CHMP7 (ENSPCOG00000007383) #28	ENSPCOG00000000697	RHOBTB2 (ENSPCOG00000015995) #30	PEBP4 (ENSPCOG00000021149) #31	EGR3 (ENSPCOG00000014614) #32	ENSPCOG00000021166	BIN3 (ENSPCOG00000007346) #33	CCAR2 (ENSPCOG00000023051) #34	C8orf58 (ENSPCOG00000019584) #35	PDLIM2 (ENSPCOG00000028327) #36	SORBS3 (ENSPCOG00000023510) #37
Greater bamboo lemur	MODERN SPECIES	673								ENSPSMG00000007401 #9	NEFL (ENSPSMG00000007394) #11	NEFM (ENSPSMG00000007376) #12	ADAM7 (ENSPSMG00000007340) #13	ADAMDEC1 (ENSPSMG00000007297) #14	ADAM28 (ENSPSMG00000007277) #16	STC1 (ENSPSMG00000007248) #20	NKX2-6 (ENSPSMG00000007224) #21	NKX3-1 (ENSPSMG00000007221) #22	SLC25A37 (ENSPSMG00000007215) #23	ENTPD4 (ENSPSMG00000006961) #25	LOXL2 (ENSPSMG00000006788) #26	R3HCC1 (ENSPSMG00000006721) #27	CHMP7 (ENSPSMG00000006684) #28	ENSPSMG00000006654	RHOBTB2 (ENSPSMG00000006602) #30	PEBP4 (ENSPSMG00000006592) #31	EGR3 (ENSPSMG00000006585) #32	BIN3 (ENSPSMG00000006576) #33	CCAR2 (ENSPSMG00000006549) #34	C8orf58 (ENSPSMG00000006508) #35	PDLIM2 (ENSPSMG00000006490) #36	SORBS3 (ENSPSMG00000006317) #37	PPP3CC (ENSPSMG00000006186)
Bushbaby	MODERN SPECIES	189	PNMA2 (ENSOGAG00000011246)	BNIP3L (ENSOGAG00000003163)	PPP2R2A (ENSOGAG00000034741)	EBF2 (ENSOGAG00000010783)	CDCA2 (ENSOGAG00000002970)	KCTD9 (ENSOGAG00000002969) #7	GNRH1 (ENSOGAG00000016753)	DOCK5 (ENSOGAG00000002967) #9	NEFL (ENSOGAG00000015179) #11	ENSOGAG00000026104	ADAM7 (ENSOGAG00000015171) #13	ADAMDEC1 (ENSOGAG00000015169) #14	ADAM28 (ENSOGAG00000015163) #16	STC1 (ENSOGAG00000010809) #20	NKX2-6 (ENSOGAG00000026099) #21	NKX3-1 (ENSOGAG00000001303) #22	SLC25A37 (ENSOGAG00000001295) #23	ENTPD4 (ENSOGAG00000001293) #25	LOXL2 (ENSOGAG00000001292) #26	R3HCC1 (ENSOGAG00000001291) #27	CHMP7 (ENSOGAG00000001289) #28	ENSOGAG00000014793	RHOBTB2 (ENSOGAG00000014791) #30	EGR3 (ENSOGAG00000027173) #32	BIN3 (ENSOGAG00000010586) #33	CCAR2 (ENSOGAG00000010578) #34	C8orf58 (ENSOGAG00000032875) #35	PDLIM2 (ENSOGAG00000010575) #36	SORBS3 (ENSOGAG00000010567) #37	PPP3CC (ENSOGAG00000010563)	SLC39A14 (ENSOGAG00000010558)
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Simiiformes	ANCESTRAL SPECIES	25	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35
Hominidae	ANCESTRAL SPECIES	15	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00390000013415.a.b	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00390000013415.a.b	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.l #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34
Pan	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.l #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34
Chimpanzee	MODERN SPECIES	21	BNIP3L (ENSPTRG00000020097)	ENSPTRG00000047485	PPP2R2A (ENSPTRG00000042450)	EBF2 (ENSPTRG00000003058)	CDCA2 (ENSPTRG00000020094)	KCTD9 (ENSPTRG00000020092) #7	GNRH1 (ENSPTRG00000020091)	DOCK5 (ENSPTRG00000020090) #9	NEFL (ENSPTRG00000045792) #11	NEFM (ENSPTRG00000020087) #12	ADAM7 (ENSPTRG00000020086) #13	ADAMDEC1 (ENSPTRG00000020085) #14	ADAM28 (ENSPTRG00000020084) #16	STC1 (ENSPTRG00000020083) #20	NKX2-6 (ENSPTRG00000020082) #21	NKX3-1 (ENSPTRG00000020081) #22	ENSPTRG00000052642	ENSPTRG00000042744	SLC25A37 (ENSPTRG00000020079) #23	ENSPTRG00000044788	ENTPD4 (ENSPTRG00000020078) #25	LOXL2 (ENSPTRG00000047037) #26	R3HCC1 (ENSPTRG00000020076) #27	CHMP7 (ENSPTRG00000020075) #28	TNFRSF10A (ENSPTRG00000020074)	TNFRSF10D (ENSPTRG00000031023)	TNFRSF10C (ENSPTRG00000020072)	TNFRSF10B (ENSPTRG00000020070)	RHOBTB2 (ENSPTRG00000020069) #30	PEBP4 (ENSPTRG00000020068) #31	EGR3 (ENSPTRG00000020067) #32
Bonobo	MODERN SPECIES	21	BNIP3L (ENSPPAG00000036943)	ENSPPAG00000033286	PPP2R2A (ENSPPAG00000035123)	EBF2 (ENSPPAG00000030675)	CDCA2 (ENSPPAG00000033215)	ENSPPAG00000030819 #7	GNRH1 (ENSPPAG00000028067)	DOCK5 (ENSPPAG00000040985) #9	NEFL (ENSPPAG00000039333) #11	NEFM (ENSPPAG00000029966) #12	ADAM7 (ENSPPAG00000042630) #13	ADAMDEC1 (ENSPPAG00000038047) #14	ADAM28 (ENSPPAG00000035327) #16	STC1 (ENSPPAG00000029446) #20	NKX2-6 (ENSPPAG00000027939) #21	NKX3-1 (ENSPPAG00000027435) #22	ENSPPAG00000033094	SLC25A37 (ENSPPAG00000018748) #23	ENSPPAG00000033689	ENTPD4 (ENSPPAG00000029950) #25	LOXL2 (ENSPPAG00000018080) #26	R3HCC1 (ENSPPAG00000033165) #27	CHMP7 (ENSPPAG00000044136) #28	TNFRSF10A (ENSPPAG00000040961)	TNFRSF10D (ENSPPAG00000034029)	TNFRSF10C (ENSPPAG00000029426)	TNFRSF10B (ENSPPAG00000001205)	RHOBTB2 (ENSPPAG00000030792) #30	PEBP4 (ENSPPAG00000042228) #31	EGR3 (ENSPPAG00000029705) #32	ENSPPAG00000041045
Human	MODERN SPECIES	20	PNMA2 (ENSG00000240694)	BNIP3L (ENSG00000104765)	PPP2R2A (ENSG00000221914)	EBF2 (ENSG00000221818)	CDCA2 (ENSG00000184661)	KCTD9 (ENSG00000104756) #7	GNRH1 (ENSG00000147437)	DOCK5 (ENSG00000147459) #9	NEFL (ENSG00000277586) #11	NEFM (ENSG00000104722) #12	ADAM7 (ENSG00000069206) #13	ADAMDEC1 (ENSG00000134028) #14	ADAM28 (ENSG00000042980) #16	STC1 (ENSG00000159167) #20	NKX2-6 (ENSG00000180053) #21	NKX3-1 (ENSG00000167034) #22	SLC25A37 (ENSG00000147454) #23	ENTPD4 (ENSG00000197217) #25	LOXL2 (ENSG00000134013) #26	R3HCC1 (ENSG00000104679) #27	CHMP7 (ENSG00000147457) #28	TNFRSF10A (ENSG00000104689)	TNFRSF10D (ENSG00000173530)	TNFRSF10C (ENSG00000173535)	ENSG00000284956	TNFRSF10B (ENSG00000120889)	RHOBTB2 (ENSG00000008853) #30	PEBP4 (ENSG00000134020) #31	EGR3 (ENSG00000179388) #32	BIN3 (ENSG00000147439) #33	CCAR2 (ENSG00000158941) #34
Gorilla	MODERN SPECIES	21	BNIP3L (ENSGGOG00000041240)	ENSGGOG00000027436	PPP2R2A (ENSGGOG00000011500)	EBF2 (ENSGGOG00000001585)	CDCA2 (ENSGGOG00000022784)	KCTD9 (ENSGGOG00000004480) #7	GNRH1 (ENSGGOG00000004479)	DOCK5 (ENSGGOG00000004460) #9	NEFL (ENSGGOG00000001429) #11	NEFM (ENSGGOG00000009880) #12	ADAM7 (ENSGGOG00000001012) #13	ADAMDEC1 (ENSGGOG00000001215) #14	ADAM28 (ENSGGOG00000017021) #16	STC1 (ENSGGOG00000026322) #20	NKX2-6 (ENSGGOG00000014372) #21	NKX3-1 (ENSGGOG00000041851) #22	ENSGGOG00000027906	SLC25A37 (ENSGGOG00000005025) #23	ENTPD4 (ENSGGOG00000010428) #25	LOXL2 (ENSGGOG00000013825) #26	R3HCC1 (ENSGGOG00000013817) #27	CHMP7 (ENSGGOG00000002536) #28	TNFRSF10A (ENSGGOG00000002170)	TNFRSF10D (ENSGGOG00000008019)	TNFRSF10C (ENSGGOG00000037003)	TNFRSF10B (ENSGGOG00000011051)	PEBP4 (ENSGGOG00000002433) #31	EGR3 (ENSGGOG00000002431) #32	BIN3 (ENSGGOG00000002428) #33	CCAR2 (ENSGGOG00000002424) #34	ENSGGOG00000002421 #35
Orangutan	MODERN SPECIES	21	BNIP3L (ENSPPYG00000038394)	PPP2R2A (ENSPPYG00000018455)	EBF2 (ENSPPYG00000018454)	CDCA2 (ENSPPYG00000018453)	KCTD9 (ENSPPYG00000018452) #7	GNRH1 (ENSPPYG00000018451)	DOCK5 (ENSPPYG00000031126) #9	ENSPPYG00000033175	NEFL (ENSPPYG00000018449) #11	NEFM (ENSPPYG00000018448) #12	ADAM7 (ENSPPYG00000018447) #13	ADAMDEC1 (ENSPPYG00000018446) #14	ADAM28 (ENSPPYG00000018445) #16	STC1 (ENSPPYG00000018444) #20	NKX2-6 (ENSPPYG00000018443) #21	NKX3-1 (ENSPPYG00000018442) #22	ENSPPYG00000031644	ENSPPYG00000018439	ENSPPYG00000018438 #23	LOXL2 (ENSPPYG00000018437) #26	R3HCC1 (ENSPPYG00000018436) #27	CHMP7 (ENSPPYG00000018435) #28	TNFRSF10A (ENSPPYG00000031309)	TNFRSF10D (ENSPPYG00000018433)	ENSPPYG00000018432	TNFRSF10B (ENSPPYG00000018431)	RHOBTB2 (ENSPPYG00000018430) #30	PEBP4 (ENSPPYG00000018429) #31	EGR3 (ENSPPYG00000018428) #32	ENSPPYG00000018427 #33	CCAR2 (ENSPPYG00000018426) #34
Gibbon	MODERN SPECIES	23	PNMA2 (ENSNLEG00000019079)	BNIP3L (ENSNLEG00000016221)	PPP2R2A (ENSNLEG00000028888)	EBF2 (ENSNLEG00000016189)	CDCA2 (ENSNLEG00000016169)	KCTD9 (ENSNLEG00000016156) #7	GNRH1 (ENSNLEG00000032497)	DOCK5 (ENSNLEG00000016075) #9	NEFL (ENSNLEG00000016066) #11	ENSNLEG00000016060	ADAM7 (ENSNLEG00000016022) #13	ADAMDEC1 (ENSNLEG00000015990) #14	ADAM28 (ENSNLEG00000015981) #16	STC1 (ENSNLEG00000015971) #20	NKX2-6 (ENSNLEG00000015970) #21	NKX3-1 (ENSNLEG00000030037) #22	ENSNLEG00000029971	ENSNLEG00000035146	SLC25A37 (ENSNLEG00000015964) #23	ENTPD4 (ENSNLEG00000015948) #25	LOXL2 (ENSNLEG00000026866) #26	R3HCC1 (ENSNLEG00000015944) #27	CHMP7 (ENSNLEG00000015905) #28	TNFRSF10A (ENSNLEG00000015888)	ENSNLEG00000033814	ENSNLEG00000015879	RHOBTB2 (ENSNLEG00000015848) #30	ENSNLEG00000033467 #31	EGR3 (ENSNLEG00000015829) #32	BIN3 (ENSNLEG00000029150) #33	CCAR2 (ENSNLEG00000015683) #34
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33
Vervet Monkey	MODERN SPECIES	27	BNIP3L (ENSCSAG00000016055)	PPP2R2A (ENSCSAG00000016060)	ENSCSAG00000016062	ENSCSAG00000016068	CDCA2 (ENSCSAG00000016076)	ENSCSAG00000016100 #7	GNRH1 (ENSCSAG00000016109)	DOCK5 (ENSCSAG00000016128) #9	NEFL (ENSCSAG00000016132) #11	NEFM (ENSCSAG00000016135) #12	ADAM7 (ENSCSAG00000016187) #13	ADAMDEC1 (ENSCSAG00000016207) #14	ADAM28 (ENSCSAG00000016220) #16	STC1 (ENSCSAG00000016224) #20	NKX2-6 (ENSCSAG00000016228) #21	NKX3-1 (ENSCSAG00000016229) #22	SLC25A37 (ENSCSAG00000016232) #23	ENTPD4 (ENSCSAG00000016236) #25	LOXL2 (ENSCSAG00000016241) #26	R3HCC1 (ENSCSAG00000016250) #27	CHMP7 (ENSCSAG00000016259) #28	TNFRSF10A (ENSCSAG00000016263)	TNFRSF10D (ENSCSAG00000016271)	TNFRSF10C (ENSCSAG00000016281)	TNFRSF10B (ENSCSAG00000016289)	RHOBTB2 (ENSCSAG00000016294) #30	PEBP4 (ENSCSAG00000016301) #31	EGR3 (ENSCSAG00000016304) #32	BIN3 (ENSCSAG00000016333) #33	CCAR2 (ENSCSAG00000016353) #34	C8orf58 (ENSCSAG00000016376) #35
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00910000147586	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33
Macaca	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00910000147586	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00950000182882.B #33
Pig-tailed macaque	MODERN SPECIES	579	ENSMNEG00000010649	EBF2 (ENSMNEG00000040606)	ENSMNEG00000035457	CDCA2 (ENSMNEG00000036287)	KCTD9 (ENSMNEG00000044328) #7	GNRH1 (ENSMNEG00000042496)	DOCK5 (ENSMNEG00000043546) #9	ENSMNEG00000022002	NEFL (ENSMNEG00000039854) #11	NEFM (ENSMNEG00000028916) #12	ADAM7 (ENSMNEG00000041516) #13	ADAMDEC1 (ENSMNEG00000027019) #14	ADAM28 (ENSMNEG00000035956) #16	STC1 (ENSMNEG00000044899) #20	NKX2-6 (ENSMNEG00000029977) #21	NKX3-1 (ENSMNEG00000029607) #22	SLC25A37 (ENSMNEG00000033209) #23	ENSMNEG00000042125	ENTPD4 (ENSMNEG00000028969) #25	LOXL2 (ENSMNEG00000041821) #26	R3HCC1 (ENSMNEG00000043283) #27	CHMP7 (ENSMNEG00000035503) #28	TNFRSF10D (ENSMNEG00000042359)	TNFRSF10A (ENSMNEG00000034319)	ENSMNEG00000044970	TNFRSF10B (ENSMNEG00000035485)	RHOBTB2 (ENSMNEG00000041610) #30	PEBP4 (ENSMNEG00000030811) #31	EGR3 (ENSMNEG00000035687) #32	BIN3 (ENSMNEG00000016873) #33	ENSMNEG00000029252
Macaca_a	ANCESTRAL SPECIES	16	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34
Rhesus	MODERN SPECIES	18	PPP2R2A (ENSMMUG00000041905)	EBF2 (ENSMMUG00000005760)	CDCA2 (ENSMMUG00000010582)	KCTD9 (ENSMMUG00000010151) #7	GNRH1 (ENSMMUG00000029018)	DOCK5 (ENSMMUG00000008028) #9	NEFL (ENSMMUG00000003348) #11	NEFM (ENSMMUG00000000639) #12	ENSMMUG00000058642	ENSMMUG00000054167	ADAM7 (ENSMMUG00000007909) #13	ADAMDEC1 (ENSMMUG00000005318) #14	ADAM28 (ENSMMUG00000005317) #16	STC1 (ENSMMUG00000046186) #20	NKX2-6 (ENSMMUG00000020863) #21	NKX3-1 (ENSMMUG00000009796) #22	ENSMMUG00000064526	SLC25A37 (ENSMMUG00000054404) #23	ENTPD4 (ENSMMUG00000016658) #25	LOXL2 (ENSMMUG00000050549) #26	R3HCC1 (ENSMMUG00000016655) #27	CHMP7 (ENSMMUG00000016653) #28	TNFRSF10A (ENSMMUG00000007542)	ENSMMUG00000014947	ENSMMUG00000061712	TNFRSF10B (ENSMMUG00000048076)	RHOBTB2 (ENSMMUG00000007540) #30	ENSMMUG00000052501	PEBP4 (ENSMMUG00000018345) #31	EGR3 (ENSMMUG00000058396) #32	BIN3 (ENSMMUG00000021994) #33
Crab-eating macaque	MODERN SPECIES	18	BNIP3L (ENSMFAG00000003324)	PPP2R2A (ENSMFAG00000045160)	EBF2 (ENSMFAG00000036796)	CDCA2 (ENSMFAG00000044937)	KCTD9 (ENSMFAG00000000476) #7	GNRH1 (ENSMFAG00000052417)	DOCK5 (ENSMFAG00000001732) #9	NEFL (ENSMFAG00000031550) #11	ENSMFAG00000044080	ENSMFAG00000057085	ADAM7 (ENSMFAG00000045244) #13	ADAMDEC1 (ENSMFAG00000007172) #14	ADAM28 (ENSMFAG00000039137) #16	STC1 (ENSMFAG00000060775) #20	NKX2-6 (ENSMFAG00000040141) #21	NKX3-1 (ENSMFAG00000047611) #22	SLC25A37 (ENSMFAG00000027746) #23	ENTPD4 (ENSMFAG00000037815) #25	LOXL2 (ENSMFAG00000041868) #26	R3HCC1 (ENSMFAG00000032894) #27	CHMP7 (ENSMFAG00000031228) #28	ENSMFAG00000009371	ENSMFAG00000065248	TNFRSF10A (ENSMFAG00000029610)	ENSMFAG00000051335	TNFRSF10B (ENSMFAG00000002092)	RHOBTB2 (ENSMFAG00000036619) #30	PEBP4 (ENSMFAG00000036169) #31	EGR3 (ENSMFAG00000065520) #32	ENSMFAG00000047841	BIN3 (ENSMFAG00000042420) #33
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00910000147586	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33
Olive baboon	MODERN SPECIES	18	ENSPANG00000048024	EBF2 (ENSPANG00000020231)	CDCA2 (ENSPANG00000008115)	KCTD9 (ENSPANG00000019100) #7	DOCK5 (ENSPANG00000005750) #9	NEFL (ENSPANG00000011988) #11	NEFM (ENSPANG00000018460) #12	ENSPANG00000038971	ENSPANG00000030915	ADAM7 (ENSPANG00000017131) #13	ADAMDEC1 (ENSPANG00000022045) #14	ADAM28 (ENSPANG00000005176) #16	ENSPANG00000005177	STC1 (ENSPANG00000048289) #20	NKX2-6 (ENSPANG00000019014) #21	NKX3-1 (ENSPANG00000004934) #22	SLC25A37 (ENSPANG00000000653) #23	ENTPD4 (ENSPANG00000000652) #25	LOXL2 (ENSPANG00000011564) #26	R3HCC1 (ENSPANG00000000453) #27	CHMP7 (ENSPANG00000024531) #28	TNFRSF10A (ENSPANG00000005889)	ENSPANG00000033702	ENSPANG00000046450	TNFRSF10B (ENSPANG00000009912)	RHOBTB2 (ENSPANG00000020434) #30	PEBP4 (ENSPANG00000022788) #31	EGR3 (ENSPANG00000019015) #32	BIN3 (ENSPANG00000020851) #33	CCAR2 (ENSPANG00000018828) #34	C8orf58 (ENSPANG00000026225) #35
Cercopithecinae_d	ANCESTRAL SPECIES	50	ENSGT00390000012635.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00910000147586	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33
Sooty mangabey	MODERN SPECIES	555	ENSCATG00000045206	PPP2R2A (ENSCATG00000037089)	EBF2 (ENSCATG00000039203)	CDCA2 (ENSCATG00000031991)	KCTD9 (ENSCATG00000038906) #7	GNRH1 (ENSCATG00000041582)	DOCK5 (ENSCATG00000043562) #9	ENSCATG00000030152	NEFL (ENSCATG00000042551) #11	NEFM (ENSCATG00000042530) #12	ADAM7 (ENSCATG00000041478) #13	ADAMDEC1 (ENSCATG00000043054) #14	ADAM28 (ENSCATG00000043598) #16	STC1 (ENSCATG00000026956) #20	NKX2-6 (ENSCATG00000045337) #21	NKX3-1 (ENSCATG00000008649) #22	SLC25A37 (ENSCATG00000035944) #23	ENSCATG00000035953	ENSCATG00000036960	ENTPD4 (ENSCATG00000041935) #25	LOXL2 (ENSCATG00000038025) #26	R3HCC1 (ENSCATG00000032971) #27	CHMP7 (ENSCATG00000015291) #28	TNFRSF10A (ENSCATG00000029264)	TNFRSF10D (ENSCATG00000043425)	TNFRSF10C (ENSCATG00000038580)	TNFRSF10B (ENSCATG00000038988)	RHOBTB2 (ENSCATG00000035570) #30	PEBP4 (ENSCATG00000030855) #31	EGR3 (ENSCATG00000030973) #32	BIN3 (ENSCATG00000039415) #33
Rhinopithecus	ANCESTRAL SPECIES	55	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.k.b.b.a #7	ENSGT00940000154314.k.b.a #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23
Black snub-nosed monkey	MODERN SPECIES	98	ENSRBIG00000031494	PPP2R2A (ENSRBIG00000028497)	EBF2 (ENSRBIG00000011662)	ENSRBIG00000026024	CDCA2 (ENSRBIG00000039250)	ENSRBIG00000044540 #7	GNRH1 (ENSRBIG00000042433)	DOCK5 (ENSRBIG00000022198) #9	NEFL (ENSRBIG00000033397) #11	NEFM (ENSRBIG00000044501) #12	ADAM7 (ENSRBIG00000022906) #13	ADAMDEC1 (ENSRBIG00000032045) #14	ADAM28 (ENSRBIG00000020078) #16	STC1 (ENSRBIG00000032107) #20	NKX2-6 (ENSRBIG00000041260) #21	NKX3-1 (ENSRBIG00000023436) #22	SLC25A37 (ENSRBIG00000032128) #23	ENSRBIG00000038195	ENSRBIG00000006016	ENTPD4 (ENSRBIG00000006283) #25	LOXL2 (ENSRBIG00000040838) #26	R3HCC1 (ENSRBIG00000028045) #27	CHMP7 (ENSRBIG00000002287) #28	TNFRSF10A (ENSRBIG00000030697)
Golden snub-nosed monkey	MODERN SPECIES	3147														STC1 (ENSRROG00000042390) #20	NKX2-6 (ENSRROG00000041779) #21	NKX3-1 (ENSRROG00000035532) #22	ENSRROG00000042740	SLC25A37 (ENSRROG00000009524) #23	ENSRROG00000035963	ENSRROG00000020274 #25
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.l #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B.g #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35
Cebidae	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.l #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B.g.b #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Cebidae_a	ANCESTRAL SPECIES	44	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314.l #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000164765	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B.g.b #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Capuchin	MODERN SPECIES	221			ENSCCAG00000017319	CDCA2 (ENSCCAG00000026541)	ENSCCAG00000030611 #7	GNRH1 (ENSCCAG00000030404)	DOCK5 (ENSCCAG00000033128) #9	ENSCCAG00000004867	NEFL (ENSCCAG00000035869) #11	NEFM (ENSCCAG00000028697) #12	ADAM7 (ENSCCAG00000028360) #13	ADAMDEC1 (ENSCCAG00000034847) #14	ADAM28 (ENSCCAG00000021142) #16	STC1 (ENSCCAG00000029913) #20	NKX2-6 (ENSCCAG00000030537) #21	NKX3-1 (ENSCCAG00000029164) #22	SLC25A37 (ENSCCAG00000029132) #23	ENTPD4 (ENSCCAG00000022243) #25	LOXL2 (ENSCCAG00000032063) #26	R3HCC1 (ENSCCAG00000037811) #27	CHMP7 (ENSCCAG00000028089) #28	TNFRSF10A (ENSCCAG00000028468)	TNFRSF10B (ENSCCAG00000020824)	RHOBTB2 (ENSCCAG00000027624) #30	PEBP4 (ENSCCAG00000035666) #31	EGR3 (ENSCCAG00000030322) #32	ENSCCAG00000031619 #33	CCAR2 (ENSCCAG00000026081) #34	C8orf58 (ENSCCAG00000036764) #35	PDLIM2 (ENSCCAG00000038057) #36	SORBS3 (ENSCCAG00000027374) #37
Bolivian squirrel monkey	MODERN SPECIES	132	DPYSL2 (ENSSBOG00000022904)	BNIP3L (ENSSBOG00000001484)	PPP2R2A (ENSSBOG00000022095)	EBF2 (ENSSBOG00000029332)	CDCA2 (ENSSBOG00000025034)	KCTD9 (ENSSBOG00000020467) #7	GNRH1 (ENSSBOG00000030355)	DOCK5 (ENSSBOG00000018389) #9	ENSSBOG00000031985 #11	ENSSBOG00000026028	ADAM7 (ENSSBOG00000033466) #13	ADAMDEC1 (ENSSBOG00000023422) #14	ADAM28 (ENSSBOG00000021104) #16	STC1 (ENSSBOG00000008335) #20	NKX2-6 (ENSSBOG00000001212) #21	NKX3-1 (ENSSBOG00000031270) #22	ENSSBOG00000030155	ENSSBOG00000027698	SLC25A37 (ENSSBOG00000033528) #23	ENTPD4 (ENSSBOG00000023265) #25	LOXL2 (ENSSBOG00000025403) #26	R3HCC1 (ENSSBOG00000022590) #27	CHMP7 (ENSSBOG00000021845) #28	TNFRSF10A (ENSSBOG00000030969)	ENSSBOG00000032163	ENSSBOG00000015163	TNFRSF10B (ENSSBOG00000031524)	RHOBTB2 (ENSSBOG00000034058) #30	PEBP4 (ENSSBOG00000031968) #31	EGR3 (ENSSBOG00000013814) #32	ENSSBOG00000021528 #33
Marmoset	MODERN SPECIES	4	KCTD9 (ENSCJAG00000019969) #7	DOCK5 (ENSCJAG00000019986) #9	NEFL (ENSCJAG00000020035) #11	ENSCJAG00000010608	ENSCJAG00000082023	NEFM (ENSCJAG00000020047) #12	ENSCJAG00000076019	ENSCJAG00000070069	ADAM7 (ENSCJAG00000020053) #13	ADAMDEC1 (ENSCJAG00000020062) #14	ADAM28 (ENSCJAG00000020075) #16	ENSCJAG00000064111	ENSCJAG00000082609	STC1 (ENSCJAG00000081929) #20	NKX2-6 (ENSCJAG00000085390) #21	NKX3-1 (ENSCJAG00000060555) #22	ENSCJAG00000061125	SLC25A37 (ENSCJAG00000076826) #23	LOXL2 (ENSCJAG00000020099) #26	R3HCC1 (ENSCJAG00000020118) #27	CHMP7 (ENSCJAG00000020123) #28	TNFRSF10A (ENSCJAG00000041514)	TNFRSF10B (ENSCJAG00000020135)	RHOBTB2 (ENSCJAG00000020143) #30	PEBP4 (ENSCJAG00000020158) #31	EGR3 (ENSCJAG00000059573) #32	ENSCJAG00000020166 #33	CCAR2 (ENSCJAG00000020174) #34	C8orf58 (ENSCJAG00000020218) #35	PDLIM2 (ENSCJAG00000020226) #36	SORBS3 (ENSCJAG00000020235) #37
Mas night monkey	MODERN SPECIES	974	ENSANAG00000031085	BNIP3L (ENSANAG00000025801)	PPP2R2A (ENSANAG00000033237)	EBF2 (ENSANAG00000022835)	CDCA2 (ENSANAG00000037820)	ENSANAG00000025804 #7	GNRH1 (ENSANAG00000034874)	DOCK5 (ENSANAG00000032901) #9	NEFL (ENSANAG00000022798) #11	NEFM (ENSANAG00000029941) #12	ADAM7 (ENSANAG00000024071) #13	ADAMDEC1 (ENSANAG00000023742) #14	ADAM28 (ENSANAG00000026076) #16	STC1 (ENSANAG00000026165) #20	NKX2-6 (ENSANAG00000027024) #21	NKX3-1 (ENSANAG00000037342) #22	SLC25A37 (ENSANAG00000035262) #23	ENSANAG00000034733	ENTPD4 (ENSANAG00000038166) #25	LOXL2 (ENSANAG00000021247) #26	R3HCC1 (ENSANAG00000036169) #27	CHMP7 (ENSANAG00000019835) #28	TNFRSF10A (ENSANAG00000036835)	TNFRSF10D (ENSANAG00000024101)	TNFRSF10B (ENSANAG00000032145)	RHOBTB2 (ENSANAG00000022868) #30	PEBP4 (ENSANAG00000033373) #31	EGR3 (ENSANAG00000037983) #32	ENSANAG00000001773 #33	CCAR2 (ENSANAG00000037041) #34	C8orf58 (ENSANAG00000026815) #35
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Eulipotyphla	ANCESTRAL SPECIES	1908															ENSGT00940000162737 #21	ENSGT00940000160930 #22
Hedgehog	MODERN SPECIES	15659															NKX2-6 (ENSEEUG00000001108) #21	NKX3-1 (ENSEEUG00000001113) #22
Common shrew	MODERN SPECIES	7992																ENSSARG00000001895 #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Chiroptera	ANCESTRAL SPECIES	64	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Microchiroptera	ANCESTRAL SPECIES	57	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Greater horseshoe bat	MODERN SPECIES	9	PPP2R2A (ENSRFEG00010006444)	EBF2 (ENSRFEG00010006593)	CDCA2 (ENSRFEG00010006703)	KCTD9 (ENSRFEG00010006936) #7	GNRH1 (ENSRFEG00010006984)	DOCK5 (ENSRFEG00010007027) #9	NEFL (ENSRFEG00010007163) #11	ENSRFEG00010007201	ADAM7 (ENSRFEG00010007316) #13	ADAMDEC1 (ENSRFEG00010007930) #14	ADAM28 (ENSRFEG00010007990) #16	STC1 (ENSRFEG00010008368) #20	ENSRFEG00010008447	ENSRFEG00010008464	NKX2-6 (ENSRFEG00010008490) #21	NKX3-1 (ENSRFEG00010008525) #22	SLC25A37 (ENSRFEG00010008583) #23	ENTPD4 (ENSRFEG00010008625) #25	LOXL2 (ENSRFEG00010008683) #26	R3HCC1 (ENSRFEG00010008730) #27	CHMP7 (ENSRFEG00010008763) #28	ENSRFEG00010008806	ENSRFEG00010008858	RHOBTB2 (ENSRFEG00010008927) #30	PEBP4 (ENSRFEG00010009078) #31	EGR3 (ENSRFEG00010009121) #32	BIN3 (ENSRFEG00010009192) #33	CCAR2 (ENSRFEG00010009297) #34	C8orf58 (ENSRFEG00010009386) #35	ENSRFEG00010009418 #36	SORBS3 (ENSRFEG00010009553) #37
Microbat	MODERN SPECIES	1085	DPYSL2 (ENSMLUG00000000271)	BNIP3L (ENSMLUG00000014949)	PPP2R2A (ENSMLUG00000030355)	EBF2 (ENSMLUG00000011509)	CDCA2 (ENSMLUG00000006321)	KCTD9 (ENSMLUG00000006310) #7	GNRH1 (ENSMLUG00000006306)	DOCK5 (ENSMLUG00000006278) #9	ENSMLUG00000029940	ADAM7 (ENSMLUG00000009580) #13	ADAMDEC1 (ENSMLUG00000009552) #14	ADAM28 (ENSMLUG00000009526) #16	ENSMLUG00000027935	ENSMLUG00000023520	STC1 (ENSMLUG00000010663) #20	NKX3-1 (ENSMLUG00000006118) #22
Megabat	MODERN SPECIES	1233															NKX2-6 (ENSPVAG00000005380) #21	NKX3-1 (ENSPVAG00000005378) #22	ENSPVAG00000005377	SLC25A37 (ENSPVAG00000005376) #23
Equus	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.j	ENSGT00940000162957.i	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Donkey	MODERN SPECIES	22	PNMA2 (ENSEASG00005035920)	EBF2 (ENSEASG00005015624)	CDCA2 (ENSEASG00005015623)	KCTD9 (ENSEASG00005015621) #7	GNRH1 (ENSEASG00005015619)	DOCK5 (ENSEASG00005015240) #9	ENSEASG00005032794	NEFL (ENSEASG00005015035) #11	NEFM (ENSEASG00005015031) #12	ENSEASG00005018749 #13	ENSEASG00005025876 #13	ADAMDEC1 (ENSEASG00005018757) #14	ADAM28 (ENSEASG00005018766) #16	STC1 (ENSEASG00005025792) #20	NKX2-6 (ENSEASG00005018774) #21	NKX3-1 (ENSEASG00005018775) #22	SLC25A37 (ENSEASG00005026222) #23	ENTPD4 (ENSEASG00005018778) #25	LOXL2 (ENSEASG00005018781) #26	R3HCC1 (ENSEASG00005018782) #27	CHMP7 (ENSEASG00005018783) #28	ENSEASG00005036200	ENSEASG00005036097	RHOBTB2 (ENSEASG00005018788) #30	PEBP4 (ENSEASG00005018790) #31	EGR3 (ENSEASG00005029305) #32	BIN3 (ENSEASG00005018792) #33	CCAR2 (ENSEASG00005018793) #34	C8orf58 (ENSEASG00005018796) #35	PDLIM2 (ENSEASG00005018800) #36	SORBS3 (ENSEASG00005018804) #37
Horse	MODERN SPECIES	11	ENSECAG00000051786	ENSECAG00000032941	ENSECAG00000048777	CDCA2 (ENSECAG00000013188)	KCTD9 (ENSECAG00000011535) #7	GNRH1 (ENSECAG00000010664)	DOCK5 (ENSECAG00000023607) #9	NEFL (ENSECAG00000022890) #11	NEFM (ENSECAG00000022370) #12	ADAM7 (ENSECAG00000020537) #13	ADAMDEC1 (ENSECAG00000019922) #14	ADAM28 (ENSECAG00000014577) #16	ENSECAG00000053236	STC1 (ENSECAG00000013731) #20	NKX2-6 (ENSECAG00000028673) #21	NKX3-1 (ENSECAG00000001509) #22	SLC25A37 (ENSECAG00000013319) #23	ENTPD4 (ENSECAG00000010493) #25	LOXL2 (ENSECAG00000025038) #26	R3HCC1 (ENSECAG00000025013) #27	CHMP7 (ENSECAG00000024657) #28	ENSECAG00000036031	ENSECAG00000024512	RHOBTB2 (ENSECAG00000024136) #30	PEBP4 (ENSECAG00000023802) #31	EGR3 (ENSECAG00000023741) #32	BIN3 (ENSECAG00000022315) #33	CCAR2 (ENSECAG00000020651) #34	C2H8orf58 (ENSECAG00000020618) #35	PDLIM2 (ENSECAG00000019910) #36	SORBS3 (ENSECAG00000017281) #37
Carnivora	ANCESTRAL SPECIES	5	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Caniformia	ANCESTRAL SPECIES	7	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.q.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Mustelinae	ANCESTRAL SPECIES	104			ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
American mink	MODERN SPECIES	232														STC1 (ENSNVIG00000023570) #20	NKX2-6 (ENSNVIG00000023566) #21	NKX3-1 (ENSNVIG00000023562) #22	SLC25A37 (ENSNVIG00000023560) #23	ENSNVIG00000023559	ENTPD4 (ENSNVIG00000023555) #25	LOXL2 (ENSNVIG00000023548) #26	R3HCC1 (ENSNVIG00000023544) #27	CHMP7 (ENSNVIG00000023539) #28	RHOBTB2 (ENSNVIG00000023533) #30	PEBP4 (ENSNVIG00000023531) #31	EGR3 (ENSNVIG00000023524) #32	BIN3 (ENSNVIG00000023519) #33	CCAR2 (ENSNVIG00000023506) #34	C8orf58 (ENSNVIG00000023502) #35	PDLIM2 (ENSNVIG00000023477) #36	VINEX (ENSNVIG00000023464) #37	PPP3CC (ENSNVIG00000023435)
Ferret	MODERN SPECIES	256	PPP2R2A (ENSMPUG00000003186)	EBF2 (ENSMPUG00000003195)	ENSMPUG00000003203	CDCA2 (ENSMPUG00000003208)	KCTD9 (ENSMPUG00000003214) #7	GNRH1 (ENSMPUG00000003219)	DOCK5 (ENSMPUG00000003228) #9	NEFL (ENSMPUG00000003244) #11	ENSMPUG00000003249	ADAM7 (ENSMPUG00000003252) #13	ENSMPUG00000018762	ADAMDEC1 (ENSMPUG00000003330) #14	ADAM28 (ENSMPUG00000003381) #16	STC1 (ENSMPUG00000003399) #20	NKX2-6 (ENSMPUG00000003409) #21	NKX3-1 (ENSMPUG00000003418) #22	SLC25A37 (ENSMPUG00000003422) #23	ENTPD4 (ENSMPUG00000003442) #25	LOXL2 (ENSMPUG00000003449) #26	R3HCC1 (ENSMPUG00000003457) #27	ENSMPUG00000003465	CHMP7 (ENSMPUG00000003471) #28	RHOBTB2 (ENSMPUG00000003474) #30	PEBP4 (ENSMPUG00000003480) #31	EGR3 (ENSMPUG00000003485) #32	CCAR2 (ENSMPUG00000003486) #34	BIN3 (ENSMPUG00000003498) #33	C8orf58 (ENSMPUG00000003516) #35	PDLIM2 (ENSMPUG00000003539) #36	SORBS3 (ENSMPUG00000003610) #37	PPP3CC (ENSMPUG00000003630)
Ursidae	ANCESTRAL SPECIES	50	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.q.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Giant Panda	MODERN SPECIES	15	PNMA2 (ENSAMEG00000023900)	BNIP3L (ENSAMEG00000000287)	PPP2R2A (ENSAMEG00000000302)	EBF2 (ENSAMEG00000000326)	CDCA2 (ENSAMEG00000000346)	KCTD9 (ENSAMEG00000000365) #7	GNRH1 (ENSAMEG00000000386)	DOCK5 (ENSAMEG00000000393) #9	NEFL (ENSAMEG00000000584) #11	ENSAMEG00000000596	ADAM7 (ENSAMEG00000001607) #13	ADAMDEC1 (ENSAMEG00000001578) #14	ADAM28 (ENSAMEG00000001508) #16	STC1 (ENSAMEG00000024356) #20	NKX2-6 (ENSAMEG00000002863) #21	NKX3-1 (ENSAMEG00000026096) #22	SLC25A37 (ENSAMEG00000002868) #23	ENTPD4 (ENSAMEG00000002873) #25	LOXL2 (ENSAMEG00000002911) #26	R3HCC1 (ENSAMEG00000002963) #27	CHMP7 (ENSAMEG00000002969) #28	RHOBTB2 (ENSAMEG00000002993) #30	PEBP4 (ENSAMEG00000003010) #31	EGR3 (ENSAMEG00000003013) #32	BIN3 (ENSAMEG00000003027) #33	CCAR2 (ENSAMEG00000003044) #34	C8orf58 (ENSAMEG00000003077) #35	PDLIM2 (ENSAMEG00000003082) #36	PPP3CC (ENSAMEG00000003134)	SLC39A14 (ENSAMEG00000003151)	PIWIL2 (ENSAMEG00000003171)
Canidae	ANCESTRAL SPECIES	31	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734.h #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734.h #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Dog	MODERN SPECIES	17	PPP2R2A (ENSCAFG00845013645)	EBF2 (ENSCAFG00845013887)	ENSCAFG00845013986	ENSCAFG00845014017	CDCA2 (ENSCAFG00845014066)	KCTD9 (ENSCAFG00845014154) #7	GNRH1 (ENSCAFG00845014221)	DOCK5 (ENSCAFG00845014289) #9	NEFL (ENSCAFG00845014438) #11	NEFM (ENSCAFG00845014497)	ADAM7 (ENSCAFG00845014694) #13	ADAMDEC1 (ENSCAFG00845014873) #14	ADAM28 (ENSCAFG00845015078) #16	STC1 (ENSCAFG00845015608) #20	NKX2-6 (ENSCAFG00845015839) #21	NKX3-1 (ENSCAFG00845015954) #22	SLC25A37 (ENSCAFG00845016130) #23	ENTPD4 (ENSCAFG00845016515) #25	LOXL2 (ENSCAFG00845017019) #26	R3HCC1 (ENSCAFG00845017316) #27	CHMP7 (ENSCAFG00845017718) #28	RHOBTB2 (ENSCAFG00845018128) #30	PEBP4 (ENSCAFG00845018869) #31	EGR3 (ENSCAFG00845019362) #32	BIN3 (ENSCAFG00845019490) #33	CCAR2 (ENSCAFG00845019929) #34	C8orf58 (ENSCAFG00845020195) #35	PDLIM2 (ENSCAFG00845020425) #36	SORBS3 (ENSCAFG00845020887) #37	PPP3CC (ENSCAFG00845022916)	SLC39A14 (ENSCAFG00845023697)
Dingo	MODERN SPECIES	304	ENSCAFG00020012600	PNMA2 (ENSCAFG00020012608)	ENSCAFG00020012611	PPP2R2A (ENSCAFG00020012619)	EBF2 (ENSCAFG00020012629)	CDCA2 (ENSCAFG00020012668)	KCTD9 (ENSCAFG00020012683) #7	GNRH1 (ENSCAFG00020012686)	DOCK5 (ENSCAFG00020012698) #9	NEFM (ENSCAFG00020012742) #12	NEFL (ENSCAFG00020012757) #11	ADAM7 (ENSCAFG00020012781) #13	ADAM28 (ENSCAFG00020012819) #16	STC1 (ENSCAFG00020012841) #20	ENSCAFG00020012845 #21	NKX3-1 (ENSCAFG00020012847) #22	SLC25A37 (ENSCAFG00020012855) #23	ENSCAFG00020012856 #25	LOXL2 (ENSCAFG00020012866) #26	R3HCC1 (ENSCAFG00020012870) #27	CHMP7 (ENSCAFG00020012876) #28	RHOBTB2 (ENSCAFG00020012882) #30	PEBP4 (ENSCAFG00020012890) #31	EGR3 (ENSCAFG00020012893) #32	BIN3 (ENSCAFG00020012894) #33	ENSCAFG00020012898 #34	ENSCAFG00020012923 #34	C8orf58 (ENSCAFG00020012932) #35	PDLIM2 (ENSCAFG00020012938) #36	SORBS3 (ENSCAFG00020012942) #37	PPP3CC (ENSCAFG00020012963)
Red fox	MODERN SPECIES	67	EBF2 (ENSVVUG00000003772)	ENSVVUG00000004033	ENSVVUG00000004038	KCTD9 (ENSVVUG00000004063) #7	GNRH1 (ENSVVUG00000004172)	ENSVVUG00000004182 #9	ENSVVUG00000004272 #9	ENSVVUG00000004850	NEFL (ENSVVUG00000004852) #11	NEFM (ENSVVUG00000004862) #12	ADAM7 (ENSVVUG00000004873) #13	ADAMDEC1 (ENSVVUG00000004882) #14	ADAM28 (ENSVVUG00000004891) #16	STC1 (ENSVVUG00000004921) #20	NKX2-6 (ENSVVUG00000004929) #21	ENSVVUG00000004932 #22	SLC25A37 (ENSVVUG00000004950) #23	ENTPD4 (ENSVVUG00000004962) #25	LOXL2 (ENSVVUG00000004974) #26	R3HCC1 (ENSVVUG00000005056) #27	CHMP7 (ENSVVUG00000005081) #28	RHOBTB2 (ENSVVUG00000005099) #30	PEBP4 (ENSVVUG00000005125) #31	EGR3 (ENSVVUG00000005144) #32	BIN3 (ENSVVUG00000005147) #33	CCAR2 (ENSVVUG00000005152) #34	CUNH8orf58 (ENSVVUG00000005160) #35	PDLIM2 (ENSVVUG00000005161) #36	SORBS3 (ENSVVUG00000005170) #37	PPP3CC (ENSVVUG00000005197)	SLC39A14 (ENSVVUG00000005212)
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Panthera	ANCESTRAL SPECIES	5	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406.b #13	ENSGT00940000161406.a #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
Tiger	MODERN SPECIES	446	PNMA2 (ENSPTIG00000004671)	BNIP3L (ENSPTIG00000007550)	PPP2R2A (ENSPTIG00000004184)	EBF2 (ENSPTIG00000021987)	CDCA2 (ENSPTIG00000020815)	KCTD9 (ENSPTIG00000020189) #7	GNRH1 (ENSPTIG00000019710)	DOCK5 (ENSPTIG00000015263) #9	NEFL (ENSPTIG00000013748) #11	ENSPTIG00000013410	ENSPTIG00000010903 #13	ENSPTIG00000008882 #13	ADAMDEC1 (ENSPTIG00000007220) #14	ADAM28 (ENSPTIG00000020425) #16	STC1 (ENSPTIG00000020203) #20	NKX3-1 (ENSPTIG00000019365) #22	SLC25A37 (ENSPTIG00000018510) #23	ENTPD4 (ENSPTIG00000014881) #25	LOXL2 (ENSPTIG00000013484) #26	R3HCC1 (ENSPTIG00000011230) #27	CHMP7 (ENSPTIG00000009000) #28	RHOBTB2 (ENSPTIG00000007097) #30	PEBP4 (ENSPTIG00000006490) #31	EGR3 (ENSPTIG00000005782) #32	BIN3 (ENSPTIG00000000447) #33	CCAR2 (ENSPTIG00000019114) #34	C8orf58 (ENSPTIG00000015907) #35	PDLIM2 (ENSPTIG00000010673) #36	SORBS3 (ENSPTIG00000007552) #37	PPP3CC (ENSPTIG00000022097)	SLC39A14 (ENSPTIG00000021976)
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406.b #13	ENSGT00940000161685.A.a	ENSGT00940000161406.a #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00940000157986
leopard	MODERN SPECIES	49	PPP2R2A (ENSPPRG00000023725)	EBF2 (ENSPPRG00000024264)	CDCA2 (ENSPPRG00000017681)	KCTD9 (ENSPPRG00000013953) #7	GNRH1 (ENSPPRG00000013600)	DOCK5 (ENSPPRG00000013437) #9	ENSPPRG00000011381 #11	NEFL (ENSPPRG00000010879) #11	NEFM (ENSPPRG00000009800) #12	ENSPPRG00000008890 #13	ENSPPRG00000007410 #13	ADAMDEC1 (ENSPPRG00000006694) #14	ADAM28 (ENSPPRG00000005754) #16	STC1 (ENSPPRG00000004675) #20	NKX2-6 (ENSPPRG00000004345) #21	NKX3-1 (ENSPPRG00000004152) #22	SLC25A37 (ENSPPRG00000003800) #23	ENTPD4 (ENSPPRG00000003654) #25	LOXL2 (ENSPPRG00000003080) #26	R3HCC1 (ENSPPRG00000002522) #27	CHMP7 (ENSPPRG00000001462) #28	RHOBTB2 (ENSPPRG00000000275) #30	PEBP4 (ENSPPRG00000017284) #31	EGR3 (ENSPPRG00000015837) #32	BIN3 (ENSPPRG00000014405) #33	CCAR2 (ENSPPRG00000013075) #34	C8orf58 (ENSPPRG00000012102) #35	PDLIM2 (ENSPPRG00000009469) #36	SORBS3 (ENSPPRG00000006181) #37	PPP3CC (ENSPPRG00000003854)	SLC39A14 (ENSPPRG00000000738)
lion	MODERN SPECIES	4	PNMA2 (ENSPLOG00000002750)	BNIP3L (ENSPLOG00000002778)	PPP2R2A (ENSPLOG00000002836)	EBF2 (ENSPLOG00000002904)	CDCA2 (ENSPLOG00000002958)	KCTD9 (ENSPLOG00000003006) #7	GNRH1 (ENSPLOG00000003031)	DOCK5 (ENSPLOG00000003063) #9	ENSPLOG00000003197	NEFL (ENSPLOG00000003220) #11	ADAM7 (ENSPLOG00000003308) #13	ADAMDEC1 (ENSPLOG00000003417) #14	ADAM28 (ENSPLOG00000003535) #16	STC1 (ENSPLOG00000003716) #20	NKX2-6 (ENSPLOG00000003735) #21	NKX3-1 (ENSPLOG00000003755) #22	SLC25A37 (ENSPLOG00000003786) #23	ENTPD4 (ENSPLOG00000003831) #25	LOXL2 (ENSPLOG00000003867) #26	R3HCC1 (ENSPLOG00000003894) #27	CHMP7 (ENSPLOG00000003917) #28	RHOBTB2 (ENSPLOG00000003941) #30	PEBP4 (ENSPLOG00000003959) #31	EGR3 (ENSPLOG00000003981) #32	BIN3 (ENSPLOG00000004006) #33	CCAR2 (ENSPLOG00000004036) #34	C8orf58 (ENSPLOG00000004106) #35	PDLIM2 (ENSPLOG00000004126) #36	SORBS3 (ENSPLOG00000004161) #37	PPP3CC (ENSPLOG00000004219)	SLC39A14 (ENSPLOG00000004308)
Cat	MODERN SPECIES	235	BNIP3L (ENSFCAG00000030159)	PPP2R2A (ENSFCAG00000029721)	EBF2 (ENSFCAG00000003607)	ENSFCAG00000023720	CDCA2 (ENSFCAG00000011887)	KCTD9 (ENSFCAG00000011885) #7	GNRH1 (ENSFCAG00000029305)	DOCK5 (ENSFCAG00000011883) #9	NEFL (ENSFCAG00000013441) #11	NEFM (ENSFCAG00000029288) #12	ADAM7 (ENSFCAG00000013087) #13	ADAMDEC1 (ENSFCAG00000003531) #14	ADAM28 (ENSFCAG00000008957) #16	STC1 (ENSFCAG00000026611) #20	NKX2-6 (ENSFCAG00000038582) #21	NKX3-1 (ENSFCAG00000039688) #22	SLC25A37 (ENSFCAG00000005418) #23	ENTPD4 (ENSFCAG00000005417) #25	LOXL2 (ENSFCAG00000012400) #26	R3HCC1 (ENSFCAG00000012395) #27	CHMP7 (ENSFCAG00000031450) #28	RHOBTB2 (ENSFCAG00000005670) #30	PEBP4 (ENSFCAG00000029653) #31	EGR3 (ENSFCAG00000005668) #32	BIN3 (ENSFCAG00000005667) #33	CCAR2 (ENSFCAG00000005666) #34	CB1H8orf58 (ENSFCAG00000024843) #35	PDLIM2 (ENSFCAG00000005664) #36	SORBS3 (ENSFCAG00000005663) #37	PPP3CC (ENSFCAG00000030895)	SLC39A14 (ENSFCAG00000001452)
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Suina	ANCESTRAL SPECIES	42	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Chacoan peccary	MODERN SPECIES	813	PNMA2 (ENSCWAG00000012323)	BNIP3L (ENSCWAG00000012345)	PPP2R2A (ENSCWAG00000012404)	EBF2 (ENSCWAG00000012599)	CDCA2 (ENSCWAG00000012969)	KCTD9 (ENSCWAG00000013249) #7	GNRH1 (ENSCWAG00000013307)	DOCK5 (ENSCWAG00000013368) #9	NEFL (ENSCWAG00000013873) #11	ENSCWAG00000013920	ADAM7 (ENSCWAG00000013998) #13	ADAMDEC1 (ENSCWAG00000014486) #14	ADAM28 (ENSCWAG00000014725) #16	STC1 (ENSCWAG00000014909) #20	NKX2-6 (ENSCWAG00000014986) #21	NKX3-1 (ENSCWAG00000015012) #22	SLC25A37 (ENSCWAG00000015044) #23	ENTPD4 (ENSCWAG00000015072) #25	LOXL2 (ENSCWAG00000015127) #26	R3HCC1 (ENSCWAG00000015202) #27	CHMP7 (ENSCWAG00000015296) #28	RHOBTB2 (ENSCWAG00000015338) #30	PEBP4 (ENSCWAG00000015546) #31	EGR3 (ENSCWAG00000015603) #32	BIN3 (ENSCWAG00000015644) #33	CCAR2 (ENSCWAG00000015750) #34	C8orf58 (ENSCWAG00000015807) #35	PDLIM2 (ENSCWAG00000015849) #36	SORBS3 (ENSCWAG00000015893) #37	PPP3CC (ENSCWAG00000016041)	SLC39A14 (ENSCWAG00000016115)
Pig	MODERN SPECIES	5	EBF2 (ENSSSCG00000009655)	ENSSSCG00000042774	CDCA2 (ENSSSCG00000009653)	KCTD9 (ENSSSCG00000009652) #7	GNRH1 (ENSSSCG00000009651)	DOCK5 (ENSSSCG00000009650) #9	NEFL (ENSSSCG00000009649) #11	ENSSSCG00000009648	ENSSSCG00000060373	ENSSSCG00000057307	ADAM7 (ENSSSCG00000009646) #13	ADAMDEC1 (ENSSSCG00000009645) #14	ADAM28 (ENSSSCG00000009644) #16	STC1 (ENSSSCG00000009642) #20	NKX2-6 (ENSSSCG00000028064) #21	NKX3-1 (ENSSSCG00000031924) #22	ENSSSCG00000033037 #23	ENTPD4 (ENSSSCG00000031871) #25	LOXL2 (ENSSSCG00000033608) #26	ENSSSCG00000039915 #27	CHMP7 (ENSSSCG00000033113) #28	ENSSSCG00000058071	ENSSSCG00000009633	RHOBTB2 (ENSSSCG00000009638) #30	PEBP4 (ENSSSCG00000009631) #31	EGR3 (ENSSSCG00000009630) #32	ENSSSCG00000061246	BIN3 (ENSSSCG00000009629) #33	CCAR2 (ENSSSCG00000009628) #34	C8orf58 (ENSSSCG00000009627) #35	PDLIM2 (ENSSSCG00000009625) #36
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.f	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.f	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Cetacea	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.f	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Odontoceti	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Sperm whale	MODERN SPECIES	20	PPP2R2A (ENSPCTG00005001540)	EBF2 (ENSPCTG00005001486)	ENSPCTG00005001468	CDCA2 (ENSPCTG00005001413)	KCTD9 (ENSPCTG00005001337) #7	GNRH1 (ENSPCTG00005001298)	DOCK5 (ENSPCTG00005001083) #9	NEFL (ENSPCTG00005001011) #11	NEFM (ENSPCTG00005000983) #12	ENSPCTG00005000957	ADAM7 (ENSPCTG00005000905) #13	ADAMDEC1 (ENSPCTG00005000843) #14	ADAM28 (ENSPCTG00005000741) #16	STC1 (ENSPCTG00005000557) #20	NKX2-6 (ENSPCTG00005000444) #21	NKX3-1 (ENSPCTG00005015538) #22	ENSPCTG00005015478	SLC25A37 (ENSPCTG00005015433) #23	ENSPCTG00005015370	ENSPCTG00005015319	ENTPD4 (ENSPCTG00005015209) #25	LOXL2 (ENSPCTG00005015101) #26	BIN3 (ENSPCTG00005014854) #33	CCAR2 (ENSPCTG00005014790) #34	ENSPCTG00005014687 #30	ENSPCTG00005014672	PPP3CC (ENSPCTG00005014485)	SLC39A14 (ENSPCTG00005014396)	PIWIL2 (ENSPCTG00005013801)	POLR3D (ENSPCTG00005013730)	PHYHIP (ENSPCTG00005013651)
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Dolphin	MODERN SPECIES	4932															NKX2-6 (ENSTTRG00000012331) #21	ENSTTRG00000012332 #22
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37
Vaquita	MODERN SPECIES	17	ENSPSNG00000010536	EBF2 (ENSPSNG00000010256)	ENSPSNG00000010228	ENSPSNG00000010183	CDCA2 (ENSPSNG00000009875)	KCTD9 (ENSPSNG00000009803) #7	GNRH1 (ENSPSNG00000004028)	ENSPSNG00000003996	ENSPSNG00000003965	NEFL (ENSPSNG00000003946) #11	ENSPSNG00000003914	ADAMDEC1 (ENSPSNG00000003873) #14	ADAM28 (ENSPSNG00000003790) #16	STC1 (ENSPSNG00000003726) #20	NKX2-6 (ENSPSNG00000003713) #21	NKX3-1 (ENSPSNG00000003693) #22	ENSPSNG00000003682	SLC25A37 (ENSPSNG00000003670) #23	ENTPD4 (ENSPSNG00000003639) #25	LOXL2 (ENSPSNG00000003593) #26	R3HCC1 (ENSPSNG00000003548) #27	CHMP7 (ENSPSNG00000003508) #28	ENSPSNG00000003483	ENSPSNG00000003447	ENSPSNG00000003423	RHOBTB2 (ENSPSNG00000003361) #30	PEBP4 (ENSPSNG00000003231) #31	EGR3 (ENSPSNG00000003185) #32	BIN3 (ENSPSNG00000003145) #33	CCAR2 (ENSPSNG00000003064) #34	C8orf58 (ENSPSNG00000003015) #35
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01010000228881	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36
Beluga whale	MODERN SPECIES	4	BNIP3L (ENSDLEG00000001250)	PPP2R2A (ENSDLEG00000001272)	ENSDLEG00000001289	EBF2 (ENSDLEG00000001316)	ENSDLEG00000001380	CDCA2 (ENSDLEG00000001385)	KCTD9 (ENSDLEG00000001415) #7	GNRH1 (ENSDLEG00000001435)	DOCK5 (ENSDLEG00000002343) #9	ENSDLEG00000006462	NEFL (ENSDLEG00000006467) #11	NEFM (ENSDLEG00000006476) #12	ADAM28 (ENSDLEG00000006489) #16	STC1 (ENSDLEG00000006517) #20	ENSDLEG00000006522 #21	NKX3-1 (ENSDLEG00000006531) #22	SLC25A37 (ENSDLEG00000006540) #23	ENSDLEG00000006543	ENTPD4 (ENSDLEG00000006555) #25	LOXL2 (ENSDLEG00000006576) #26	R3HCC1 (ENSDLEG00000006591) #27	CHMP7 (ENSDLEG00000006605) #28	ENSDLEG00000006614	ENSDLEG00000006626	ZNF484 (ENSDLEG00000006635)	ENSDLEG00000006641	IARS (ENSDLEG00000006757)	NOL8 (ENSDLEG00000007445)	CENPP (ENSDLEG00000007526)	OGN (ENSDLEG00000007549)	OMD (ENSDLEG00000007553)
Blue whale	MODERN SPECIES	17	ENSBMSG00010001374	PPP2R2A (ENSBMSG00010001403)	EBF2 (ENSBMSG00010001470)	CDCA2 (ENSBMSG00010001504)	KCTD9 (ENSBMSG00010001525) #7	GNRH1 (ENSBMSG00010001589)	DOCK5 (ENSBMSG00010001626) #9	NEFL (ENSBMSG00010001677) #11	NEFM (ENSBMSG00010001692) #12	ENSBMSG00010001706	ENSBMSG00010001750 #13	ADAMDEC1 (ENSBMSG00010001768) #14	ENSBMSG00010001817 #16	STC1 (ENSBMSG00010001852) #20	NKX2-6 (ENSBMSG00010001859) #21	NKX3-1 (ENSBMSG00010001867) #22	SLC25A37 (ENSBMSG00010001881) #23	ENSBMSG00010001888	ENSBMSG00010001897	ENTPD4 (ENSBMSG00010001918) #25	LOXL2 (ENSBMSG00010001934) #26	ENSBMSG00010001963 #27	CHMP7 (ENSBMSG00010001987) #28	ENSBMSG00010002015	RHOBTB2 (ENSBMSG00010002063) #30	PEBP4 (ENSBMSG00010002119) #31	EGR3 (ENSBMSG00010002174) #32	BIN3 (ENSBMSG00010002206) #33	CCAR2 (ENSBMSG00010002236) #34	C8orf58 (ENSBMSG00010002259) #35	PDLIM2 (ENSBMSG00010002288) #36
Pecora	ANCESTRAL SPECIES	36	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a	ENSGT00960000190195
Yarkand deer	MODERN SPECIES	7	ENSCHYG00000026854	ENSCHYG00000026841	EBF2 (ENSCHYG00000026813)	CDCA2 (ENSCHYG00000026788)	KCTD9 (ENSCHYG00000026770) #7	GNRH1 (ENSCHYG00000026755)	DOCK5 (ENSCHYG00000026683) #9	NEFL (ENSCHYG00000026647) #11	NEFM (ENSCHYG00000026636) #12	ADAM7 (ENSCHYG00000026508) #13	ADAMDEC1 (ENSCHYG00000026439) #14	ADAM28 (ENSCHYG00000025837) #16	ENSCHYG00000025762	STC1 (ENSCHYG00000025743) #20	NKX2-6 (ENSCHYG00000025734) #21	NKX3-1 (ENSCHYG00000025709) #22	SLC25A37 (ENSCHYG00000025677) #23	ENTPD4 (ENSCHYG00000025626) #25	LOXL2 (ENSCHYG00000025533) #26	R3HCC1 (ENSCHYG00000025446) #27	CHMP7 (ENSCHYG00000025352) #28	ENSCHYG00000025211	RHOBTB2 (ENSCHYG00000025115) #30	PEBP4 (ENSCHYG00000025076) #31	EGR3 (ENSCHYG00000025046) #32	BIN3 (ENSCHYG00000024970) #33	CCAR2 (ENSCHYG00000024837) #34	C8orf58 (ENSCHYG00000024797) #35	PDLIM2 (ENSCHYG00000024701) #36	SORBS3 (ENSCHYG00000024528) #37	PPP3CC (ENSCHYG00000023801)
Percora_a	ANCESTRAL SPECIES	24	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00970000197193
Bovidae	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00970000197193
Caprinae	ANCESTRAL SPECIES	14	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860.n #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Goat	MODERN SPECIES	27	ENSCHIG00000024818	PPP2R2A (ENSCHIG00000007473)	EBF2 (ENSCHIG00000023729)	CDCA2 (ENSCHIG00000018580)	KCTD9 (ENSCHIG00000015791) #7	GNRH1 (ENSCHIG00000016406)	DOCK5 (ENSCHIG00000001085) #9	NEFL (ENSCHIG00000011951) #11	NEFM (ENSCHIG00000019945) #12	ADAM7 (ENSCHIG00000015652) #13	ADAMDEC1 (ENSCHIG00000015701) #14	ADAM28 (ENSCHIG00000024308) #16	ENSCHIG00000012581	STC1 (ENSCHIG00000010708) #20	NKX2-6 (ENSCHIG00000023290) #21	NKX3-1 (ENSCHIG00000010463) #22	ENSCHIG00000009620	ENSCHIG00000010457	SLC25A37 (ENSCHIG00000009638) #23	ENTPD4 (ENSCHIG00000017608) #25	LOXL2 (ENSCHIG00000015358) #26	R3HCC1 (ENSCHIG00000009107) #27	ENSCHIG00000024704 #28	ENSCHIG00000021504	ENSCHIG00000026442	ENSCHIG00000015870	RHOBTB2 (ENSCHIG00000010021) #30	PEBP4 (ENSCHIG00000018763) #31	EGR3 (ENSCHIG00000022674) #32	BIN3 (ENSCHIG00000020329) #33	CCAR2 (ENSCHIG00000007510) #34
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020013277	DPYSL2 (ENSOARG00020013413)	PNMA2 (ENSOARG00020013810)	ENSOARG00020013834	PPP2R2A (ENSOARG00020013913)	EBF2 (ENSOARG00020014139)	CDCA2 (ENSOARG00020014388)	KCTD9 (ENSOARG00020014450) #7	DOCK5 (ENSOARG00020014672) #9	GNRH1 (ENSOARG00020017575)	NEFL (ENSOARG00020017673) #11	NEFM (ENSOARG00020017740) #12	ADAM7 (ENSOARG00020017810) #13	STC1 (ENSOARG00020019387) #20	NKX2-6 (ENSOARG00020019459) #21	NKX3-1 (ENSOARG00020019488) #22	SLC25A37 (ENSOARG00020019551) #23	ENTPD4 (ENSOARG00020019615) #25	ENSOARG00020019697 #28	ENSOARG00020019730	RHOBTB2 (ENSOARG00020019759) #30	PEBP4 (ENSOARG00020019900) #31	EGR3 (ENSOARG00020019990) #32	BIN3 (ENSOARG00020020084) #33	CCAR2 (ENSOARG00020020234) #34	C8orf58 (ENSOARG00020020420) #35	PDLIM2 (ENSOARG00020020511) #36	SORBS3 (ENSOARG00020020583) #37	PPP3CC (ENSOARG00020020737)	ENSOARG00020020965	SLC39A14 (ENSOARG00020020996)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00970000197193
Bos	ANCESTRAL SPECIES	10	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b.a	ENSGT00940000158918.i.b #30	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b
Bos_b	ANCESTRAL SPECIES	3	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00950000183031.B.e.b.a.a.a	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918.j #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558 #37	ENSGT00970000197193
Cow	MODERN SPECIES	27	EBF2 (ENSBTAG00000040390)	CDCA2 (ENSBTAG00000002756)	KCTD9 (ENSBTAG00000012382) #7	GNRH1 (ENSBTAG00000000164)	DOCK5 (ENSBTAG00000015513) #9	NEFL (ENSBTAG00000021949) #11	NEFM (ENSBTAG00000039530)	ADAM7 (ENSBTAG00000039171) #13	ADAMDEC1 (ENSBTAG00000001125) #14	ADAM28 (ENSBTAG00000037929) #16	ENSBTAG00000038064	ENSBTAG00000048755	STC1 (ENSBTAG00000001687) #20	ENSBTAG00000051369	NKX2-6 (ENSBTAG00000014008) #21	NKX3-1 (ENSBTAG00000001221) #22	SLC25A37 (ENSBTAG00000019099) #23	ENTPD4 (ENSBTAG00000006768) #25	LOXL2 (ENSBTAG00000006214) #26	R3HCC1 (ENSBTAG00000025830) #27	CHMP7 (ENSBTAG00000013528) #28	RHOBTB2 (ENSBTAG00000035958) #30	ENSBTAG00000050001	PEBP4 (ENSBTAG00000015416) #31	EGR3 (ENSBTAG00000019293) #32	BIN3 (ENSBTAG00000005470) #33	CCAR2 (ENSBTAG00000005469) #34	C8H8orf58 (ENSBTAG00000005466) #35	PDLIM2 (ENSBTAG00000007369) #36	ENSBTAG00000054318	SORBS3 (ENSBTAG00000014401) #37
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005023958	PPP2R2A (ENSBIXG00005024066)	EBF2 (ENSBIXG00005024188)	CDCA2 (ENSBIXG00005024231)	KCTD9 (ENSBIXG00005004143) #7	GNRH1 (ENSBIXG00005024264)	DOCK5 (ENSBIXG00005024516) #9	NEFL (ENSBIXG00005024596) #11	NEFM (ENSBIXG00005002572) #12	ADAM7 (ENSBIXG00005024699) #13	ENSBIXG00005025151 #16	ENSBIXG00005025234	ENSBIXG00005004295	STC1 (ENSBIXG00005025303) #20	NKX2-6 (ENSBIXG00005025314) #21	NKX3-1 (ENSBIXG00005025337) #22	SLC25A37 (ENSBIXG00005025367) #23	LOXL2 (ENSBIXG00005025479) #26	R3HCC1 (ENSBIXG00005025548) #27	CHMP7 (ENSBIXG00005025583) #28	ENSBIXG00005025600	ENSBIXG00005025709	RHOBTB2 (ENSBIXG00005026098) #30	ENSBIXG00005026205 #31	EGR3 (ENSBIXG00005026284) #32	BIN3 (ENSBIXG00005026346) #33	CCAR2 (ENSBIXG00005026417) #34	C8orf58 (ENSBIXG00005026447) #35	PDLIM2 (ENSBIXG00005026481) #36	ENSBIXG00005026487	SORBS3 (ENSBIXG00005007094) #37
Bos_a	ANCESTRAL SPECIES	20	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00990000214190	ENSGT00940000156208 #11	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b.a	ENSGT00940000158918.i.b #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558 #37
Domestic yak	MODERN SPECIES	26	PPP2R2A (ENSBGRG00000000395)	EBF2 (ENSBGRG00000017109)	CDCA2 (ENSBGRG00000016906)	KCTD9 (ENSBGRG00000016782) #7	GNRH1 (ENSBGRG00000016731)	DOCK5 (ENSBGRG00000015972) #9	ENSBGRG00000015920	NEFL (ENSBGRG00000015850) #11	NEFM (ENSBGRG00000015744) #12	ENSBGRG00000015724	ADAM7 (ENSBGRG00000014923) #13	ENSBGRG00000014430 #14	ENSBGRG00000014380	STC1 (ENSBGRG00000014320) #20	NKX2-6 (ENSBGRG00000014251) #21	NKX3-1 (ENSBGRG00000014189) #22	SLC25A37 (ENSBGRG00000014111) #23	ENTPD4 (ENSBGRG00000013839) #25	LOXL2 (ENSBGRG00000013709) #26	R3HCC1 (ENSBGRG00000013568) #27	CHMP7 (ENSBGRG00000013440) #28	ENSBGRG00000013324	ENSBGRG00000013289 #30	PEBP4 (ENSBGRG00000013188) #31	EGR3 (ENSBGRG00000013085) #32	BIN3 (ENSBGRG00000012804) #33	CCAR2 (ENSBGRG00000012594) #34	C8orf58 (ENSBGRG00000012373) #35	PDLIM2 (ENSBGRG00000012168) #36	ENSBGRG00000012132	SORBS3 (ENSBGRG00000011774) #37
Wild yak	MODERN SPECIES	1056										ADAM7 (ENSBMUG00000005939) #13	ADAMDEC1 (ENSBMUG00000006004) #14	ADAM28 (ENSBMUG00000006021) #16	ENSBMUG00000006030	STC1 (ENSBMUG00000006043) #20	NKX2-6 (ENSBMUG00000006056) #21	NKX3-1 (ENSBMUG00000006065) #22	SLC25A37 (ENSBMUG00000006085) #23
Siberian musk deer	MODERN SPECIES	327	ENSMMSG00000005972	EBF2 (ENSMMSG00000005908)	CDCA2 (ENSMMSG00000005842)	KCTD9 (ENSMMSG00000005761) #7	GNRH1 (ENSMMSG00000005726)	DOCK5 (ENSMMSG00000005425) #9	NEFL (ENSMMSG00000005342) #11	NEFM (ENSMMSG00000005289) #12	ADAM7 (ENSMMSG00000004688) #13	ADAMDEC1 (ENSMMSG00000004507) #14	ADAM28 (ENSMMSG00000004400) #16	ENSMMSG00000004334	ENSMMSG00000004320	STC1 (ENSMMSG00000013160) #20	NKX2-6 (ENSMMSG00000013148) #21	NKX3-1 (ENSMMSG00000013132) #22	SLC25A37 (ENSMMSG00000013114) #23	ENTPD4 (ENSMMSG00000013068) #25	LOXL2 (ENSMMSG00000013026) #26	R3HCC1 (ENSMMSG00000012970) #27	CHMP7 (ENSMMSG00000012943) #28	ENSMMSG00000012887	RHOBTB2 (ENSMMSG00000012820) #30	PEBP4 (ENSMMSG00000012800) #31	EGR3 (ENSMMSG00000012782) #32	BIN3 (ENSMMSG00000012720) #33	CCAR2 (ENSMMSG00000012636) #34	C8orf58 (ENSMMSG00000012599) #35	PDLIM2 (ENSMMSG00000012537) #36	SORBS3 (ENSMMSG00000012318) #37	ENSMMSG00000012271
Camelidae	ANCESTRAL SPECIES	47	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.f	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418.r #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Arabian camel	MODERN SPECIES	24	PNMA2 (ENSCDRG00005018959)	BNIP3L (ENSCDRG00005018890)	PPP2R2A (ENSCDRG00005018721)	ENSCDRG00005018693	EBF2 (ENSCDRG00005018634)	CDCA2 (ENSCDRG00005018503)	KCTD9 (ENSCDRG00005018455) #7	GNRH1 (ENSCDRG00005018431)	DOCK5 (ENSCDRG00005018165) #9	NEFL (ENSCDRG00005018138) #11	ENSCDRG00005018075	ADAM7 (ENSCDRG00005017257) #13	ADAM28 (ENSCDRG00005016471) #16	STC1 (ENSCDRG00005016415) #20	ENSCDRG00005016389 #21	NKX3-1 (ENSCDRG00005016364) #22	SLC25A37 (ENSCDRG00005016317) #23	ENTPD4 (ENSCDRG00005016214) #25	LOXL2 (ENSCDRG00005016177) #26	R3HCC1 (ENSCDRG00005016059) #27	ENSCDRG00005016025	CHMP7 (ENSCDRG00005015938) #28	ENSCDRG00005015918	ENSCDRG00005015904	ENSCDRG00005015882	ENSCDRG00005015821	RHOBTB2 (ENSCDRG00005015666) #30	PEBP4 (ENSCDRG00005015556) #31	EGR3 (ENSCDRG00005015507) #32	BIN3 (ENSCDRG00005015398) #33	CCAR2 (ENSCDRG00005015276) #34
Alpaca	MODERN SPECIES	2636																NKX3-1 (ENSVPAG00000004503) #22	SLC25A37 (ENSVPAG00000004501) #23	ENSVPAG00000004500 #25
Atlantogenata	ANCESTRAL SPECIES	23	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Xenarthra	ANCESTRAL SPECIES	695											ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23
Sloth	MODERN SPECIES	10205																NKX3-1 (ENSCHOG00000011132) #22
Armadillo	MODERN SPECIES	1655										ENSDNOG00000034104	ADAM7 (ENSDNOG00000004471) #13	ADAMDEC1 (ENSDNOG00000012585) #14	ADAM28 (ENSDNOG00000012554) #16	STC1 (ENSDNOG00000047812) #20	NKX2-6 (ENSDNOG00000041367) #21	NKX3-1 (ENSDNOG00000044451) #22	SLC25A37 (ENSDNOG00000036834) #23
Afrotheria	ANCESTRAL SPECIES	19	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Afrotheria_a	ANCESTRAL SPECIES	18	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000161406 #13	ENSGT00940000156716 #16	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957	ENSGT00940000158918 #30	ENSGT00940000162387 #31	ENSGT00940000160355 #32	ENSGT00950000182882.B #33	ENSGT00530000063672.b #34	ENSGT00390000000531 #35	ENSGT00940000160418 #36	ENSGT00940000160558 #37	ENSGT00940000154115.c.a
Elephant	MODERN SPECIES	225	BNIP3L (ENSLAFG00000018106)	PPP2R2A (ENSLAFG00000021762)	EBF2 (ENSLAFG00000022465)	CDCA2 (ENSLAFG00000003532)	KCTD9 (ENSLAFG00000003529) #7	GNRH1 (ENSLAFG00000003526)	DOCK5 (ENSLAFG00000003516) #9	NEFL (ENSLAFG00000026910) #11	ENSLAFG00000006017	ENSLAFG00000022323	ENSLAFG00000030752	ENSLAFG00000026486	ADAM7 (ENSLAFG00000000586) #13	ADAM28 (ENSLAFG00000005662) #16	STC1 (ENSLAFG00000005774) #20	NKX3-1 (ENSLAFG00000008941) #22	SLC25A37 (ENSLAFG00000026743) #23	ENTPD4 (ENSLAFG00000008176) #25	LOXL2 (ENSLAFG00000022743) #26	R3HCC1 (ENSLAFG00000016137) #27	CHMP7 (ENSLAFG00000006100) #28	ENSLAFG00000007250	RHOBTB2 (ENSLAFG00000007247) #30	PEBP4 (ENSLAFG00000005308) #31	EGR3 (ENSLAFG00000028225) #32	BIN3 (ENSLAFG00000018465) #33	CCAR2 (ENSLAFG00000018459) #34	C8orf58 (ENSLAFG00000018457) #35	PDLIM2 (ENSLAFG00000018454) #36	SORBS3 (ENSLAFG00000018449) #37	PPP3CC (ENSLAFG00000018447)
Hyrax	MODERN SPECIES	12117															NKX2-6 (ENSPCAG00000016625) #21	ENSPCAG00000016644 #22
Tenrec	MODERN SPECIES	10180																NKX3-1 (ENSETEG00000018790) #22
Marsupialia	ANCESTRAL SPECIES	26	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.a	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b	ENSGT00940000161863.a.b.b.a	ENSGT00940000153123.B
Opossum	MODERN SPECIES		BNIP3L (ENSMODG00000016685)	ENSMODG00000043642	PPP2R2A (ENSMODG00000016691)	EBF2 (ENSMODG00000016702)	ENSMODG00000016706	KCTD9 (ENSMODG00000016711) #7	DOCK5 (ENSMODG00000016721) #9	NEFL (ENSMODG00000016731) #11	ENSMODG00000016740	ENSMODG00000016755 #13	ADAMDEC1 (ENSMODG00000016762) #14	ADAM28 (ENSMODG00000016767) #16	ENSMODG00000042259	STC1 (ENSMODG00000016782) #20	ENSMODG00000016788	NKX3-1 (ENSMODG00000016789) #22	ENSMODG00000016791 #23	ENSMODG00000038949 #23	ENTPD4 (ENSMODG00000016799) #25	LOXL2 (ENSMODG00000016806) #26	ENSMODG00000016809 #27	ENSMODG00000016810	ENSMODG00000038901	ENSMODG00000016814	ENSMODG00000023035	ENSMODG00000016846	ENSMODG00000016852	ENSMODG00000016866	ENSMODG00000016898	ENSMODG00000016878	ENSMODG00000042189
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #12	ENSGT00940000161406 #13	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b
Diprotodontia	ANCESTRAL SPECIES	35	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	34	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a.g.a	ENSGT00950000182859.A.a.a.b.g	ENSGT00940000154352.A	ENSGT00940000154314 #7	ENSGT00390000008225	ENSGT00940000157734 #9	ENSGT00940000156208 #11	ENSGT00940000161685.A.a	ENSGT00900000141143 #14	ENSGT00940000156716 #16	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b
koala	MODERN SPECIES	88				ENSPCIG00000000815	ENSPCIG00000001012	ENSPCIG00000001033	KCTD9 (ENSPCIG00000001064) #7	DOCK5 (ENSPCIG00000001109) #9	NEFL (ENSPCIG00000027211) #11	ENSPCIG00000016966	ADAMDEC1 (ENSPCIG00000016489) #14	ADAM28 (ENSPCIG00000011332) #16	ENSPCIG00000037234	STC1 (ENSPCIG00000015151) #20	ENSPCIG00000020778	NKX3-1 (ENSPCIG00000020776) #22	SLC25A37 (ENSPCIG00000035854) #23	ENTPD4 (ENSPCIG00000020770) #25	LOXL2 (ENSPCIG00000020766) #26	ENSPCIG00000022718 #27	ENSPCIG00000012977	ENSPCIG00000017687	ENSPCIG00000008474	ENSPCIG00000004217	ENSPCIG00000004209	ENSPCIG00000004202	ENSPCIG00000034175	ENSPCIG00000035733	ENSPCIG00000035968	ENSPCIG00000031966	ENSPCIG00000001932
Wallaby	MODERN SPECIES	7463																ENSMEUG00000003167 #22
Tasmanian devil	MODERN SPECIES	1	PPP2R2A (ENSSHAG00000025445)	EBF2 (ENSSHAG00000021589)	ENSSHAG00000014469	KCTD9 (ENSSHAG00000001024) #7	GNRH1 (ENSSHAG00000029017)	DOCK5 (ENSSHAG00000002033) #9	ENSSHAG00000028159 #11	NEFM (ENSSHAG00000006728) #12	ENSSHAG00000011334 #13	ADAMDEC1 (ENSSHAG00000011993) #14	ADAM28 (ENSSHAG00000012316) #16	ENSSHAG00000025330	STC1 (ENSSHAG00000026997) #20	ENSSHAG00000025937	ENSSHAG00000022384	NKX3-1 (ENSSHAG00000015475) #22	SLC25A37 (ENSSHAG00000021392) #23	ENTPD4 (ENSSHAG00000031790) #25	LOXL2 (ENSSHAG00000016252) #26	ENSSHAG00000024893 #27	ENSSHAG00000026818	ENSSHAG00000027942	ENSSHAG00000027951	ENSSHAG00000002898	ENSSHAG00000003538	ENSSHAG00000028239	ENSSHAG00000003953	ENSSHAG00000029645	ENSSHAG00000032171	ENSSHAG00000003235	ENSSHAG00000002352