Theria	ANCESTRAL SPECIES	38	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000165452.b	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Euarchontoglires	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Euarchontoglires_A	ANCESTRAL SPECIES	25	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Glires	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Rodentia	ANCESTRAL SPECIES	21	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Myomorpha	ANCESTRAL SPECIES	29	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Muroidea	ANCESTRAL SPECIES	26	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Murinae	ANCESTRAL SPECIES	16	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Mus	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Mus_A	ANCESTRAL SPECIES	12	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a.y #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Mus_B	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a.y #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Mouse	MODERN SPECIES	5	Pnma2 (ENSMUSG00000046204) #7	Bnip3l (ENSMUSG00000022051) #8	Ppp2r2a (ENSMUSG00000022052) #9	Ebf2 (ENSMUSG00000022053) #10	Cdca2 (ENSMUSG00000048922) #11	Kctd9 (ENSMUSG00000034327) #12	Gnrh1 (ENSMUSG00000015812) #13	Dock5 (ENSMUSG00000044447) #14	Nefm (ENSMUSG00000022054) #15	Nefl (ENSMUSG00000022055) #16	Adam7 (ENSMUSG00000022056) #17	Adamdec1 (ENSMUSG00000022057) #18	Adam28 (ENSMUSG00000014725) #19	Stc1 (ENSMUSG00000014813) #20	Nkx2-6 (ENSMUSG00000044186) #21	Nkx3-1 (ENSMUSG00000022061) #22	Slc25a37 (ENSMUSG00000034248) #23	Synb (ENSMUSG00000047977) #24	Entpd4 (ENSMUSG00000095463) #25	Gm16867 (ENSMUSG00000093954) #26	Gm27179 (ENSMUSG00000098773) #27	Entpd4b (ENSMUSG00000022066) #28	Loxl2 (ENSMUSG00000034205) #29	R3hcc1 (ENSMUSG00000034194) #30	Chmp7 (ENSMUSG00000034190) #31	Tnfrsf10b (ENSMUSG00000022074) #32	Rhobtb2 (ENSMUSG00000022075) #33	Pebp4 (ENSMUSG00000022085) #34	Egr3 (ENSMUSG00000033730) #35	Bin3 (ENSMUSG00000022089) #36	Ccar2 (ENSMUSG00000033712) #37
Mus_C	ANCESTRAL SPECIES	20	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a.y #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Steppe mouse	MODERN SPECIES	3084				Cdca2 (ENSMSIG00000023962) #11	Kctd9 (ENSMSIG00000024015) #12	ENSMSIG00000024123 #13	Dock5 (ENSMSIG00000024135) #14	Nefl (ENSMSIG00000024282) #16	ENSMSIG00000024304	Adam7 (ENSMSIG00000024335) #17	Adamdec1 (ENSMSIG00000024360) #18	Adam28 (ENSMSIG00000024389) #19	Stc1 (ENSMSIG00000024577) #20	ENSMSIG00000024592	Nkx2-6 (ENSMSIG00000024600) #21	Nkx3-1 (ENSMSIG00000024609) #22	Slc25a37 (ENSMSIG00000024616) #23	ENSMSIG00000024627 #27	ENSMSIG00000024639 #28	Loxl2 (ENSMSIG00000024664) #29	R3hcc1 (ENSMSIG00000024698) #30	Chmp7 (ENSMSIG00000024716) #31	ENSMSIG00000024730	Tnfrsf10b (ENSMSIG00000024749) #32	Rhobtb2 (ENSMSIG00000024755) #33	ENSMSIG00000024803	ENSMSIG00000024806
spretus	MODERN SPECIES	5	Pnma2 (MGP_SPRETEiJ_G0020336) #7	Bnip3l (MGP_SPRETEiJ_G0020337) #8	Ppp2r2a (MGP_SPRETEiJ_G0020338) #9	Ebf2 (MGP_SPRETEiJ_G0020339) #10	Cdca2 (MGP_SPRETEiJ_G0020340) #11	Kctd9 (MGP_SPRETEiJ_G0020341) #12	Gnrh1 (MGP_SPRETEiJ_G0020342) #13	Dock5 (MGP_SPRETEiJ_G0020343) #14	Nefm (MGP_SPRETEiJ_G0020344) #15	Nefl (MGP_SPRETEiJ_G0020345) #16	Adam7 (MGP_SPRETEiJ_G0020346) #17	Adamdec1 (MGP_SPRETEiJ_G0020347) #18	Adam28 (MGP_SPRETEiJ_G0020348) #19	Stc1 (MGP_SPRETEiJ_G0020349) #20	Nkx2-6 (MGP_SPRETEiJ_G0020350) #21	Nkx3-1 (MGP_SPRETEiJ_G0020351) #22	Slc25a37 (MGP_SPRETEiJ_G0020352) #23	MGP_SPRETEiJ_G0020354 #27	MGP_SPRETEiJ_G0020355 #27	MGP_SPRETEiJ_G0020356 #28	MGP_SPRETEiJ_G0020357 #28	Loxl2 (MGP_SPRETEiJ_G0020358) #29	R3hcc1 (MGP_SPRETEiJ_G0020359) #30	Chmp7 (MGP_SPRETEiJ_G0020360) #31	Tnfrsf10b (MGP_SPRETEiJ_G0020361) #32	Rhobtb2 (MGP_SPRETEiJ_G0020362) #33	Pebp4 (MGP_SPRETEiJ_G0020363) #34	Egr3 (MGP_SPRETEiJ_G0020364) #35	Bin3 (MGP_SPRETEiJ_G0020365) #36	Ccar2 (MGP_SPRETEiJ_G0020366) #37	9930012K11Rik (MGP_SPRETEiJ_G0020367)
Ryukyu mouse	MODERN SPECIES	5	Pnma2 (MGP_CAROLIEiJ_G0019444) #7	Bnip3l (MGP_CAROLIEiJ_G0019445) #8	MGP_CAROLIEiJ_G0019446 ##9	Ebf2 (MGP_CAROLIEiJ_G0019447) #10	Cdca2 (MGP_CAROLIEiJ_G0019448) #11	Kctd9 (MGP_CAROLIEiJ_G0019449) #12	Gnrh1 (MGP_CAROLIEiJ_G0019450) #13	Dock5 (MGP_CAROLIEiJ_G0019451) #14	Nefm (MGP_CAROLIEiJ_G0019452) #15	Nefl (MGP_CAROLIEiJ_G0019453) #16	Adam7 (MGP_CAROLIEiJ_G0019454) #17	Adamdec1 (MGP_CAROLIEiJ_G0019455) #18	Adam28 (MGP_CAROLIEiJ_G0019456) #19	Stc1 (MGP_CAROLIEiJ_G0019457) #20	Nkx2-6 (MGP_CAROLIEiJ_G0019458) #21	Nkx3-1 (MGP_CAROLIEiJ_G0019459) #22	Slc25a37 (MGP_CAROLIEiJ_G0019460) #23	MGP_CAROLIEiJ_G0019461	MGP_CAROLIEiJ_G0019462 #27	MGP_CAROLIEiJ_G0019463 #27	MGP_CAROLIEiJ_G0019464 #28	MGP_CAROLIEiJ_G0019465 #28	Loxl2 (MGP_CAROLIEiJ_G0019466) #29	R3hcc1 (MGP_CAROLIEiJ_G0019467) #30	Chmp7 (MGP_CAROLIEiJ_G0019468) #31	MGP_CAROLIEiJ_G0019469 #32	Rhobtb2 (MGP_CAROLIEiJ_G0019470) #33	Pebp4 (MGP_CAROLIEiJ_G0019471) #34	Egr3 (MGP_CAROLIEiJ_G0019472) #35	Bin3 (MGP_CAROLIEiJ_G0019473) #36	Ccar2 (MGP_CAROLIEiJ_G0019474) #37
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0030460	Bnip3l (MGP_PahariEiJ_G0030462) #8	Ppp2r2a (MGP_PahariEiJ_G0030463) #9	Ebf2 (MGP_PahariEiJ_G0030464) #10	Cdca2 (MGP_PahariEiJ_G0030465) #11	Kctd9 (MGP_PahariEiJ_G0030466) #12	Gnrh1 (MGP_PahariEiJ_G0030467) #13	Dock5 (MGP_PahariEiJ_G0030468) #14	Nefm (MGP_PahariEiJ_G0030469) #15	Nefl (MGP_PahariEiJ_G0030470) #16	Adam7 (MGP_PahariEiJ_G0030471) #17	Adamdec1 (MGP_PahariEiJ_G0030472) #18	Adam28 (MGP_PahariEiJ_G0030473) #19	Stc1 (MGP_PahariEiJ_G0030474) #20	MGP_PahariEiJ_G0030475 #21	Nkx3-1 (MGP_PahariEiJ_G0030476) #22	Slc25a37 (MGP_PahariEiJ_G0030477) #23	MGP_PahariEiJ_G0030478	MGP_PahariEiJ_G0030479 #27	MGP_PahariEiJ_G0030480 #27	MGP_PahariEiJ_G0030481 #28	MGP_PahariEiJ_G0030482 #28	Loxl2 (MGP_PahariEiJ_G0030483) #29	R3hcc1 (MGP_PahariEiJ_G0030484) #30	Chmp7 (MGP_PahariEiJ_G0030485) #31	MGP_PahariEiJ_G0030486 #32	Rhobtb2 (MGP_PahariEiJ_G0030487) #33	Pebp4 (MGP_PahariEiJ_G0030488) #34	Egr3 (MGP_PahariEiJ_G0030489) #35	Bin3 (MGP_PahariEiJ_G0030490) #36	Ccar2 (MGP_PahariEiJ_G0030491) #37
Rat	MODERN SPECIES	6	Kctd9 (ENSRNOG00000012951) #12	Gnrh1 (ENSRNOG00000013433)	Dock5 (ENSRNOG00000024703) #14	LOC120097172 (ENSRNOG00000031532)	Nefl (ENSRNOG00000013658) #16	Nefm (ENSRNOG00000013916)	Adam7 (ENSRNOG00000014054) #17	Adamdec1 (ENSRNOG00000030724) #18	Adam28 (ENSRNOG00000014518) #19	ENSRNOG00000063586 #19	AABR07018269.1 (ENSRNOG00000031720)	ENSRNOG00000063939	ENSRNOG00000067366	Stc1 (ENSRNOG00000015075) #20	Nkx2-6 (ENSRNOG00000021910) #21	Nkx3-1 (ENSRNOG00000015477) #22	Slc25a37 (ENSRNOG00000015495) #23	Synb (ENSRNOG00000021823) #27	Entpd4 (ENSRNOG00000016321) #28	Loxl2 (ENSRNOG00000016758) #29	R3hcc1 (ENSRNOG00000016777) #30	Chmp7 (ENSRNOG00000016939) #31	Tnfrsf10b (ENSRNOG00000038483) #32	Rhobtb2 (ENSRNOG00000017373) #33	Pebp4 (ENSRNOG00000026247) #34	Egr3 (ENSRNOG00000017828) #35	Bin3 (ENSRNOG00000018023) #36	Ccar2 (ENSRNOG00000018295) #37	C15h8orf58 (ENSRNOG00000008351)	Pdlim2 (ENSRNOG00000008543)	Sorbs3 (ENSRNOG00000008829)
Cricetidae	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Cricetinae	ANCESTRAL SPECIES	18	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Chinese hamster chok1gshd	MODERN SPECIES	3	Pnma2 (ENSCGRG00001010753) #7	Bnip3l (ENSCGRG00001021504) #8	Ppp2r2a (ENSCGRG00001015307) #9	Ebf2 (ENSCGRG00001001432) #10	Cdca2 (ENSCGRG00001022349) #11	Kctd9 (ENSCGRG00001022797) #12	Gnrh1 (ENSCGRG00001000327) #13	Dock5 (ENSCGRG00001021195) #14	Nefl (ENSCGRG00001016408) #16	ENSCGRG00001011263	Adam7 (ENSCGRG00001010547) #17	Adamdec1 (ENSCGRG00001013228) #18	Adam28 (ENSCGRG00001009338) #19	Stc1 (ENSCGRG00001019183) #20	Nkx2-6 (ENSCGRG00001007878) #21	Nkx3-1 (ENSCGRG00001019912) #22	Slc25a37 (ENSCGRG00001008508) #23	Synb (ENSCGRG00001011259) #27	ENSCGRG00001018845 #28	Loxl2 (ENSCGRG00001000163) #29	R3hcc1 (ENSCGRG00001014977) #30	Chmp7 (ENSCGRG00001021741) #31	Rhobtb2 (ENSCGRG00001023228) #33	Egr3 (ENSCGRG00001009879) #35	Bin3 (ENSCGRG00001014908) #36	Ccar2 (ENSCGRG00001010031) #37	9930012K11Rik (ENSCGRG00001022180)	Pdlim2 (ENSCGRG00001018717)	Sorbs3 (ENSCGRG00001019180)	Ppp3cc (ENSCGRG00001021761)	Slc39a14 (ENSCGRG00001020763)
Golden Hamster	MODERN SPECIES	642												Adamdec1 (ENSMAUG00000021097) #18	Adam28 (ENSMAUG00000012592) #19	ENSMAUG00000020290 #20	Nkx2-6 (ENSMAUG00000002996) #21	Nkx3-1 (ENSMAUG00000020666) #22	Slc25a37 (ENSMAUG00000013175) #23	ENSMAUG00000012065 #28	Loxl2 (ENSMAUG00000019178) #29	R3hcc1 (ENSMAUG00000016096) #30	Chmp7 (ENSMAUG00000017878) #31	Rhobtb2 (ENSMAUG00000003682) #33	Pebp4 (ENSMAUG00000012682) #34	Egr3 (ENSMAUG00000000747) #35	Bin3 (ENSMAUG00000013983) #36	Ccar2 (ENSMAUG00000011127) #37	9930012K11Rik (ENSMAUG00000021973)	Pdlim2 (ENSMAUG00000019610)	Sorbs3 (ENSMAUG00000021963)	Ppp3cc (ENSMAUG00000000668)	Slc39a14 (ENSMAUG00000018755)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00390000013415.a.b.p #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000163436.n.a #27	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162427.j #32	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Northern American deer mouse	MODERN SPECIES	22	Ppp2r2a (ENSPEMG00000022593) #9	Ebf2 (ENSPEMG00000007776) #10	Cdca2 (ENSPEMG00000021129) #11	Kctd9 (ENSPEMG00000020895) #12	Gnrh1 (ENSPEMG00000030807) #13	Dock5 (ENSPEMG00000023361) #14	Nefl (ENSPEMG00000020765) #16	Nefm (ENSPEMG00000020646) #15	Adam7 (ENSPEMG00000012803) #17	Adamdec1 (ENSPEMG00000004402) #18	Adam28 (ENSPEMG00000015520) #19	ENSPEMG00000030090	ENSPEMG00000027026	Stc1 (ENSPEMG00000027424) #20	Nkx2-6 (ENSPEMG00000005851) #21	Nkx3-1 (ENSPEMG00000026785) #22	Slc25a37 (ENSPEMG00000017275) #23	Synb (ENSPEMG00000024700) #27	ENSPEMG00000018234 #28	Loxl2 (ENSPEMG00000016856) #29	R3hcc1 (ENSPEMG00000007118) #30	ENSPEMG00000028382 #31	ENSPEMG00000029378 #32	Rhobtb2 (ENSPEMG00000001035) #33	Pebp4 (ENSPEMG00000001033) #34	Egr3 (ENSPEMG00000024575) #35	Bin3 (ENSPEMG00000015277) #36	Ccar2 (ENSPEMG00000009116) #37	9930012K11Rik (ENSPEMG00000016741)	Pdlim2 (ENSPEMG00000011746)	Sorbs3 (ENSPEMG00000019062)
Prairie vole	MODERN SPECIES	4	ENSMOCG00000018617 #8	Ppp2r2a (ENSMOCG00000011317) #9	ENSMOCG00000005189	Ebf2 (ENSMOCG00000007295) #10	Cdca2 (ENSMOCG00000002388) #11	Kctd9 (ENSMOCG00000016913) #12	Gnrh1 (ENSMOCG00000003491) #13	Dock5 (ENSMOCG00000009188) #14	Nefl (ENSMOCG00000012988) #16	ENSMOCG00000009013	Adam7 (ENSMOCG00000022709) #17	Adamdec1 (ENSMOCG00000021493) #18	Adam28 (ENSMOCG00000010153) #19	Stc1 (ENSMOCG00000003351) #20	Nkx2-6 (ENSMOCG00000002130) #21	Nkx3-1 (ENSMOCG00000001078) #22	Slc25a37 (ENSMOCG00000000710) #23	Synb (ENSMOCG00000018779) #27	ENSMOCG00000021822 #28	Loxl2 (ENSMOCG00000021272) #29	R3hcc1 (ENSMOCG00000018508) #30	Chmp7 (ENSMOCG00000015254) #31	ENSMOCG00000011818	Cenpj (ENSMOCG00000006479)	Parp4 (ENSMOCG00000016582)	ENSMOCG00000009441	Pspc1 (ENSMOCG00000006060)	Zmym5 (ENSMOCG00000001655)	Zmym2 (ENSMOCG00000019626)	Gja3 (ENSMOCG00000016618)	Gjb2 (ENSMOCG00000016041)
Upper Galilee mountains blind mole rat	MODERN SPECIES	487									Nefl (ENSNGAG00000006739) #16	ENSNGAG00000006331 #15	Adam7 (ENSNGAG00000023201) #17	Adamdec1 (ENSNGAG00000018142) #18	Adam28 (ENSNGAG00000007193) #19	Stc1 (ENSNGAG00000023141) #20	Nkx2-6 (ENSNGAG00000022732) #21	Nkx3-1 (ENSNGAG00000021847) #22	Slc25a37 (ENSNGAG00000016465) #23	ENSNGAG00000004016	ENSNGAG00000020742 #28	Loxl2 (ENSNGAG00000022939) #29	R3hcc1 (ENSNGAG00000016747) #30	Chmp7 (ENSNGAG00000015842) #31	Rhobtb2 (ENSNGAG00000014537) #33	Egr3 (ENSNGAG00000014204) #35	Bin3 (ENSNGAG00000012258) #36	Ccar2 (ENSNGAG00000009598) #37	9930012K11Rik (ENSNGAG00000010379)	Pdlim2 (ENSNGAG00000007929)	Sorbs3 (ENSNGAG00000015206)	Ppp3cc (ENSNGAG00000013527)	Slc39a14 (ENSNGAG00000018684)
Lesser Egyptian jerboa	MODERN SPECIES	125	Dpysl2 (ENSJJAG00000021965)	ENSJJAG00000021430 ##8	Ppp2r2a (ENSJJAG00000020800) #9	Ebf2 (ENSJJAG00000018635) #10	ENSJJAG00000016051 #11	Kctd9 (ENSJJAG00000014248) #12	Gnrh1 (ENSJJAG00000013753) #13	Dock5 (ENSJJAG00000012658) #14	Nefl (ENSJJAG00000011034) #16	Nefm (ENSJJAG00000018709) #15	Adam7 (ENSJJAG00000016655) #17	Adamdec1 (ENSJJAG00000015285) #18	Adam28 (ENSJJAG00000014433) #19	Stc1 (ENSJJAG00000013494) #20	Nkx2-6 (ENSJJAG00000013412) #21	Nkx3-1 (ENSJJAG00000013332) #22	ENSJJAG00000012211	Slc25a37 (ENSJJAG00000012106) #23	ENSJJAG00000010447 #28	Loxl2 (ENSJJAG00000009230) #29	R3hcc1 (ENSJJAG00000013075) #30	Chmp7 (ENSJJAG00000012284) #31	ENSJJAG00000011797	Rhobtb2 (ENSJJAG00000010580) #33	Egr3 (ENSJJAG00000010434) #35	Bin3 (ENSJJAG00000010054) #36	Ccar2 (ENSJJAG00000006864) #37	9930012K11Rik (ENSJJAG00000002660)	Pdlim2 (ENSJJAG00000022305)	Sorbs3 (ENSJJAG00000020896)	Ppp3cc (ENSJJAG00000000657)
Kangaroo rat	MODERN SPECIES	506	Dpysl2 (ENSDORG00000023604)	Pnma2 (ENSDORG00000009340) #7	Bnip3l (ENSDORG00000028719) ##8	Ppp2r2a (ENSDORG00000019723) #9	Ebf2 (ENSDORG00000019864) #10	ENSDORG00000007254 #11	Kctd9 (ENSDORG00000007253) #12	Gnrh1 (ENSDORG00000007251) #13	Dock5 (ENSDORG00000012003) #14	Nefl (ENSDORG00000025560) #16	ENSDORG00000027287 #15	Adam7 (ENSDORG00000007281) #17	Adamdec1 (ENSDORG00000007279) #18	Adam28 (ENSDORG00000001473) #19	Stc1 (ENSDORG00000023767) #20	ENSDORG00000024859 #22	Slc25a37 (ENSDORG00000026005) #23	ENSDORG00000008983 #28	Loxl2 (ENSDORG00000011153) #29	R3hcc1 (ENSDORG00000026365) #30	Chmp7 (ENSDORG00000007264) #31	Rhobtb2 (ENSDORG00000004193) #33	Egr3 (ENSDORG00000000937) #35	Bin3 (ENSDORG00000000935) #36	Ccar2 (ENSDORG00000000934) #37	9930012K11Rik (ENSDORG00000000932)	ENSDORG00000002868	Sorbs3 (ENSDORG00000002089)	Ppp3cc (ENSDORG00000002086)	Slc39a14 (ENSDORG00000002085)	Piwil2 (ENSDORG00000011177)
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.j #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Marmotini	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.j #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000159453.e.b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Marmotini_b	ANCESTRAL SPECIES	87										ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000159453.e.b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Arctic ground squirrel	MODERN SPECIES	186										ADAM7 (ENSUPAG00010017328) #17	ADAMDEC1 (ENSUPAG00010017356) #18	ADAM28 (ENSUPAG00010017386) #19	ENSUPAG00010017423	STC1 (ENSUPAG00010017427) #20	NKX2-6 (ENSUPAG00010017433) #21	NKX3-1 (ENSUPAG00010017442) #22	SLC25A37 (ENSUPAG00010017448) #23	ENTPD4 (ENSUPAG00010017458) #28	LOXL2 (ENSUPAG00010017498) #29	R3HCC1 (ENSUPAG00010017502) #30	CHMP7 (ENSUPAG00010017507) #31	ENSUPAG00010017525	RHOBTB2 (ENSUPAG00010017538) #33	PEBP4 (ENSUPAG00010017546) #34	EGR3 (ENSUPAG00010017554) #35	BIN3 (ENSUPAG00010017563) #36	CCAR2 (ENSUPAG00010017585) #37	C8orf58 (ENSUPAG00010017613)	PDLIM2 (ENSUPAG00010017621)	SORBS3 (ENSUPAG00010017635)	PPP3CC (ENSUPAG00010017686)
Squirrel	MODERN SPECIES	155											ADAM7 (ENSSTOG00000012955) #17	ADAMDEC1 (ENSSTOG00000032677) #18	ADAM28 (ENSSTOG00000006248) #19	STC1 (ENSSTOG00000007507) #20	NKX2-6 (ENSSTOG00000025482) #21	NKX3-1 (ENSSTOG00000029597) #22	SLC25A37 (ENSSTOG00000025533) #23	ENTPD4 (ENSSTOG00000015892) #28	LOXL2 (ENSSTOG00000015878) #29	R3HCC1 (ENSSTOG00000027130) #30	CHMP7 (ENSSTOG00000015867) #31	ENSSTOG00000001440	RHOBTB2 (ENSSTOG00000029109) #33	PEBP4 (ENSSTOG00000032426) #34	EGR3 (ENSSTOG00000021065) #35	BIN3 (ENSSTOG00000011677) #36	CCAR2 (ENSSTOG00000011666) #37	C8orf58 (ENSSTOG00000021866)	PDLIM2 (ENSSTOG00000024161)	SORBS3 (ENSSTOG00000011660)	PPP3CC (ENSSTOG00000028936)
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005003080 #9	EBF2 (ENSSVLG00005003172) #10	CDCA2 (ENSSVLG00005003275) #11	KCTD9 (ENSSVLG00005003331) #12	GNRH1 (ENSSVLG00005003367) #13	DOCK5 (ENSSVLG00005003397) #14	ENSSVLG00005003428	ENSSVLG00005003443	NEFL (ENSSVLG00005003461) #16	NEFM (ENSSVLG00005003494)	ADAM7 (ENSSVLG00005003562) #17	ADAMDEC1 (ENSSVLG00005003660) #18	ADAM28 (ENSSVLG00005003701) #19	STC1 (ENSSVLG00005003730) #20	NKX2-6 (ENSSVLG00005003752) #21	NKX3-1 (ENSSVLG00005003772) #22	SLC25A37 (ENSSVLG00005003790) #23	ENTPD4 (ENSSVLG00005003809) #28	LOXL2 (ENSSVLG00005003840) #29	R3HCC1 (ENSSVLG00005003877) #30	CHMP7 (ENSSVLG00005003902) #31	RHOBTB2 (ENSSVLG00005003947) #33	PEBP4 (ENSSVLG00005003991) #34	ENSSVLG00005004016	BIN3 (ENSSVLG00005004049) #36	CCAR2 (ENSSVLG00005004079) #37	C8orf58 (ENSSVLG00005004115)	PDLIM2 (ENSSVLG00005004159)	SORBS3 (ENSSVLG00005004211)	ENSSVLG00005004276	SLC39A14 (ENSSVLG00005004424)
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00940000172945 #26	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Long-tailed chinchilla	MODERN SPECIES	110	BNIP3L (ENSCLAG00000016223) #8	PPP2R2A (ENSCLAG00000013984) #9	EBF2 (ENSCLAG00000013500) #10	CDCA2 (ENSCLAG00000011981) #11	KCTD9 (ENSCLAG00000013948) #12	GNRH1 (ENSCLAG00000014234) #13	DOCK5 (ENSCLAG00000015174) #14	NEFL (ENSCLAG00000014935) #16	ENSCLAG00000013799 #15	ADAM7 (ENSCLAG00000013174) #17	ENSCLAG00000015375 #18	ADAM28 (ENSCLAG00000016310) #19	ENSCLAG00000015807	STC1 (ENSCLAG00000014786) #20	NKX2-6 (ENSCLAG00000014720) #21	NKX3-1 (ENSCLAG00000013957) #22	SLC25A37 (ENSCLAG00000014235) #23	ENTPD4 (ENSCLAG00000013899) #28	LOXL2 (ENSCLAG00000016283) #29	R3HCC1 (ENSCLAG00000015556) #30	CHMP7 (ENSCLAG00000015529) #31	ENSCLAG00000013896	RHOBTB2 (ENSCLAG00000014037) #33	PEBP4 (ENSCLAG00000015116) #34	EGR3 (ENSCLAG00000016373) #35	BIN3 (ENSCLAG00000016398) #36	CCAR2 (ENSCLAG00000014299) #37	C8orf58 (ENSCLAG00000014186)	ENSCLAG00000014272	SORBS3 (ENSCLAG00000014309)	PPP3CC (ENSCLAG00000015203)
Degu	MODERN SPECIES	77	ENSODEG00000007854	EBF2 (ENSODEG00000007640) #10	ENSODEG00000006905	ENSODEG00000007418 #11	KCTD9 (ENSODEG00000008616) #12	GNRH1 (ENSODEG00000007834) #13	DOCK5 (ENSODEG00000007523) #14	NEFL (ENSODEG00000007183) #16	NEFM (ENSODEG00000008392)	ENSODEG00000007521	ADAM7 (ENSODEG00000007547) #17	ADAMDEC1 (ENSODEG00000008034) #18	ADAM28 (ENSODEG00000007875) #19	STC1 (ENSODEG00000007382) #20	NKX2-6 (ENSODEG00000007413) #21	NKX3-1 (ENSODEG00000007004) #22	SLC25A37 (ENSODEG00000007363) #23	ENTPD4 (ENSODEG00000009788) #28	ENSODEG00000009404	LOXL2 (ENSODEG00000006938) #29	R3HCC1 (ENSODEG00000007529) #30	ENSODEG00000019474	ENSODEG00000007294 #31	RHOBTB2 (ENSODEG00000007111) #33	ENSODEG00000008725	EGR3 (ENSODEG00000007442) #35	BIN3 (ENSODEG00000006965) #36	CCAR2 (ENSODEG00000008466) #37	C8orf58 (ENSODEG00000006637)	PDLIM2 (ENSODEG00000006028)	SORBS3 (ENSODEG00000007179)
Guinea pig	MODERN SPECIES	1	ADRA1A (ENSCPOG00000038399)	DPYSL2 (ENSCPOG00000025679)	BNIP3L (ENSCPOG00000034680) #8	PPP2R2A (ENSCPOG00000026784) #9	EBF2 (ENSCPOG00000001463) #10	CDCA2 (ENSCPOG00000036890) #11	KCTD9 (ENSCPOG00000015540) #12	GNRH1 (ENSCPOG00000015538) #13	DOCK5 (ENSCPOG00000015533) #14	NEFL (ENSCPOG00000023838) #16	ENSCPOG00000027410 #15	ADAM7 (ENSCPOG00000001538) #17	ADAMDEC1 (ENSCPOG00000038140) #18	ADAM28 (ENSCPOG00000009707) #19	STC1 (ENSCPOG00000034351) #20	NKX3-1 (ENSCPOG00000040229) #22	SLC25A37 (ENSCPOG00000035237) #23	ENTPD4 (ENSCPOG00000009705) #28	LOXL2 (ENSCPOG00000009701) #29	R3HCC1 (ENSCPOG00000009696) #30	CHMP7 (ENSCPOG00000002456) #31	RHOBTB2 (ENSCPOG00000039763) #33	PEBP4 (ENSCPOG00000015616) #34	EGR3 (ENSCPOG00000038322) #35	BIN3 (ENSCPOG00000010994) #36	CCAR2 (ENSCPOG00000010985) #37	C8orf58 (ENSCPOG00000039428)	ENSCPOG00000020871	SORBS3 (ENSCPOG00000001115)	PPP3CC (ENSCPOG00000001113)	SLC39A14 (ENSCPOG00000001112)
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000036572	ENSHGLG00000018824 #12	GNRH1 (ENSHGLG00000017902) #13	DOCK5 (ENSHGLG00000017514) #14	ENSHGLG00000050046	NEFL (ENSHGLG00000017653) #16	ENSHGLG00000019352 #15	ENSHGLG00000036278	ADAM7 (ENSHGLG00000017673) #17	ADAMDEC1 (ENSHGLG00000011872) #18	ADAM28 (ENSHGLG00000018858) #19	ENSHGLG00000040240	STC1 (ENSHGLG00000040196) #20	NKX2-6 (ENSHGLG00000014624) #21	ENSHGLG00000044875	NKX3-1 (ENSHGLG00000049073) #22	SLC25A37 (ENSHGLG00000036264) #23	ENSHGLG00000032907 #26	ENSHGLG00000010644 #28	LOXL2 (ENSHGLG00000012019) #29	R3HCC1 (ENSHGLG00000010517) #30	ENSHGLG00000009513 #31	ENSHGLG00000032756	RHOBTB2 (ENSHGLG00000016441) #33	ENSHGLG00000049596	PEBP4 (ENSHGLG00000042512) #34	EGR3 (ENSHGLG00000040205) #35	BIN3 (ENSHGLG00000014664) #36	CCAR2 (ENSHGLG00000015483) #37	ENSHGLG00000010238	PDLIM2 (ENSHGLG00000007806)
Lagomorpha	ANCESTRAL SPECIES	60	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28
Rabbit	MODERN SPECIES	11	EBF2 (ENSOCUG00000011972) #10	CDCA2 (ENSOCUG00000014109) #11	KCTD9 (ENSOCUG00000014099) #12	GNRH1 (ENSOCUG00000014093) #13	DOCK5 (ENSOCUG00000014056) #14	NEFL (ENSOCUG00000023836) #16	ENSOCUG00000021430 #15	ADAM7 (ENSOCUG00000012104) #17	ADAMDEC1 (ENSOCUG00000001597) #18	ADAM28 (ENSOCUG00000004176) #19	ENSOCUG00000032289	ENSOCUG00000037834	ENSOCUG00000033833	STC1 (ENSOCUG00000005708) #20	NKX2-6 (ENSOCUG00000004296) #21	NKX3-1 (ENSOCUG00000004294) #22	SLC25A37 (ENSOCUG00000004114) #23	ENTPD4 (ENSOCUG00000004102) #28	DDX60 (ENSOCUG00000006355)	ENSOCUG00000029856	PALLD (ENSOCUG00000004900)	CBR4 (ENSOCUG00000006446)	SH3RF1 (ENSOCUG00000003098)	ENSOCUG00000038117	ENSOCUG00000031550	NEK1 (ENSOCUG00000016756)	CLCN3 (ENSOCUG00000006220)	HPF1 (ENSOCUG00000026923)	ENSOCUG00000036380	MFAP3L (ENSOCUG00000011514)	AADAT (ENSOCUG00000011526)
Pika	MODERN SPECIES	1500															ENSOPRG00000003185 #21	NKX3-1 (ENSOPRG00000003179) #22	ENSOPRG00000018999	ENSOPRG00000018477	SLC25A37 (ENSOPRG00000003130) #23	ENSOPRG00000003097 #28
Tree shrew	MODERN SPECIES	7913																ENSTBEG00000002319 #22
Primates	ANCESTRAL SPECIES	25	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b.e #10	ENSGT00950000182859.A.a.a.b.f #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.a	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Mouse lemur	MODERN SPECIES	12	ENSMICG00000030813 #10	ENSMICG00000043737	ENSMICG00000015774 #10	CDCA2 (ENSMICG00000031889) #11	KCTD9 (ENSMICG00000016754) #12	GNRH1 (ENSMICG00000037976) #13	DOCK5 (ENSMICG00000016726) #14	NEFL (ENSMICG00000030432) #16	ENSMICG00000036167 #15	ADAM7 (ENSMICG00000002694) #17	ADAMDEC1 (ENSMICG00000047490) #18	ENSMICG00000034192	ADAM28 (ENSMICG00000042341) #19	STC1 (ENSMICG00000032857) #20	NKX2-6 (ENSMICG00000042062) #21	NKX3-1 (ENSMICG00000011189) #22	SLC25A37 (ENSMICG00000034841) #23	ENTPD4 (ENSMICG00000011165) #28	LOXL2 (ENSMICG00000011154) #29	R3HCC1 (ENSMICG00000011146) #30	CHMP7 (ENSMICG00000011964) #31	ENSMICG00000043513	RHOBTB2 (ENSMICG00000011180) #33	PEBP4 (ENSMICG00000005019) #34	EGR3 (ENSMICG00000029687) #35	BIN3 (ENSMICG00000007768) #36	CCAR2 (ENSMICG00000007751) #37	C8orf58 (ENSMICG00000017355)	PDLIM2 (ENSMICG00000003919)	SORBS3 (ENSMICG00000003915)	PPP3CC (ENSMICG00000001851)
Lemuriformes_a	ANCESTRAL SPECIES	34	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b.e #10	ENSGT00950000182859.A.a.a.b.f #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.a	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Coquerels sifaka	MODERN SPECIES	919	BNIP3L (ENSPCOG00000026018) #8	PPP2R2A (ENSPCOG00000023269) #9	EBF2 (ENSPCOG00000027078) #10	CDCA2 (ENSPCOG00000023393) #11	KCTD9 (ENSPCOG00000020414) #12	GNRH1 (ENSPCOG00000024165) #13	DOCK5 (ENSPCOG00000016268) #14	NEFL (ENSPCOG00000026085) #16	NEFM (ENSPCOG00000022965)	ADAM7 (ENSPCOG00000026532) #17	ENSPCOG00000021910 #19	ENSPCOG00000008142	STC1 (ENSPCOG00000019531) #20	ENSPCOG00000026813	NKX2-6 (ENSPCOG00000021761) #21	NKX3-1 (ENSPCOG00000024990) #22	SLC25A37 (ENSPCOG00000028846) #23	ENTPD4 (ENSPCOG00000010184) #28	LOXL2 (ENSPCOG00000022542) #29	R3HCC1 (ENSPCOG00000027554) #30	CHMP7 (ENSPCOG00000007383) #31	ENSPCOG00000000697	RHOBTB2 (ENSPCOG00000015995) #33	PEBP4 (ENSPCOG00000021149) #34	EGR3 (ENSPCOG00000014614) #35	ENSPCOG00000021166	BIN3 (ENSPCOG00000007346) #36	CCAR2 (ENSPCOG00000023051) #37	C8orf58 (ENSPCOG00000019584)	PDLIM2 (ENSPCOG00000028327)	SORBS3 (ENSPCOG00000023510)
Greater bamboo lemur	MODERN SPECIES	673								ENSPSMG00000007401 #14	NEFL (ENSPSMG00000007394) #16	NEFM (ENSPSMG00000007376)	ADAM7 (ENSPSMG00000007340) #17	ADAMDEC1 (ENSPSMG00000007297) #18	ADAM28 (ENSPSMG00000007277) #19	STC1 (ENSPSMG00000007248) #20	NKX2-6 (ENSPSMG00000007224) #21	NKX3-1 (ENSPSMG00000007221) #22	SLC25A37 (ENSPSMG00000007215) #23	ENTPD4 (ENSPSMG00000006961) #28	LOXL2 (ENSPSMG00000006788) #29	R3HCC1 (ENSPSMG00000006721) #30	CHMP7 (ENSPSMG00000006684) #31	ENSPSMG00000006654	RHOBTB2 (ENSPSMG00000006602) #33	PEBP4 (ENSPSMG00000006592) #34	EGR3 (ENSPSMG00000006585) #35	BIN3 (ENSPSMG00000006576) #36	CCAR2 (ENSPSMG00000006549) #37	C8orf58 (ENSPSMG00000006508)	PDLIM2 (ENSPSMG00000006490)	SORBS3 (ENSPSMG00000006317)	PPP3CC (ENSPSMG00000006186)
Bushbaby	MODERN SPECIES	189	PNMA2 (ENSOGAG00000011246) #7	BNIP3L (ENSOGAG00000003163) #8	PPP2R2A (ENSOGAG00000034741) #9	EBF2 (ENSOGAG00000010783) #10	CDCA2 (ENSOGAG00000002970) #11	KCTD9 (ENSOGAG00000002969) #12	GNRH1 (ENSOGAG00000016753) #13	DOCK5 (ENSOGAG00000002967) #14	NEFL (ENSOGAG00000015179) #16	ENSOGAG00000026104 #15	ADAM7 (ENSOGAG00000015171) #17	ADAMDEC1 (ENSOGAG00000015169) #18	ADAM28 (ENSOGAG00000015163) #19	STC1 (ENSOGAG00000010809) #20	NKX2-6 (ENSOGAG00000026099) #21	NKX3-1 (ENSOGAG00000001303) #22	SLC25A37 (ENSOGAG00000001295) #23	ENTPD4 (ENSOGAG00000001293) #28	LOXL2 (ENSOGAG00000001292) #29	R3HCC1 (ENSOGAG00000001291) #30	CHMP7 (ENSOGAG00000001289) #31	ENSOGAG00000014793	RHOBTB2 (ENSOGAG00000014791) #33	EGR3 (ENSOGAG00000027173) #35	BIN3 (ENSOGAG00000010586) #36	CCAR2 (ENSOGAG00000010578) #37	C8orf58 (ENSOGAG00000032875)	PDLIM2 (ENSOGAG00000010575)	SORBS3 (ENSOGAG00000010567)	PPP3CC (ENSOGAG00000010563)	SLC39A14 (ENSOGAG00000010558)
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Simiiformes	ANCESTRAL SPECIES	25	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00960000186788	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00960000186788	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531
Hominidae	ANCESTRAL SPECIES	15	ENSGT00960000186788	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00390000013415.a.b #8	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00390000013415.a.b #8	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.l #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37
Pan	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b #8	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.l #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00550000076401	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37
Chimpanzee	MODERN SPECIES	21	BNIP3L (ENSPTRG00000020097) #8	ENSPTRG00000047485	PPP2R2A (ENSPTRG00000042450) #9	EBF2 (ENSPTRG00000003058) #10	CDCA2 (ENSPTRG00000020094) #11	KCTD9 (ENSPTRG00000020092) #12	GNRH1 (ENSPTRG00000020091) #13	DOCK5 (ENSPTRG00000020090) #14	NEFL (ENSPTRG00000045792) #16	NEFM (ENSPTRG00000020087)	ADAM7 (ENSPTRG00000020086) #17	ADAMDEC1 (ENSPTRG00000020085) #18	ADAM28 (ENSPTRG00000020084) #19	STC1 (ENSPTRG00000020083) #20	NKX2-6 (ENSPTRG00000020082) #21	NKX3-1 (ENSPTRG00000020081) #22	ENSPTRG00000052642	ENSPTRG00000042744	SLC25A37 (ENSPTRG00000020079) #23	ENSPTRG00000044788	ENTPD4 (ENSPTRG00000020078) #28	LOXL2 (ENSPTRG00000047037) #29	R3HCC1 (ENSPTRG00000020076) #30	CHMP7 (ENSPTRG00000020075) #31	TNFRSF10A (ENSPTRG00000020074)	TNFRSF10D (ENSPTRG00000031023)	TNFRSF10C (ENSPTRG00000020072)	TNFRSF10B (ENSPTRG00000020070)	RHOBTB2 (ENSPTRG00000020069) #33	PEBP4 (ENSPTRG00000020068) #34	EGR3 (ENSPTRG00000020067) #35
Bonobo	MODERN SPECIES	21	BNIP3L (ENSPPAG00000036943) #8	ENSPPAG00000033286	PPP2R2A (ENSPPAG00000035123) #9	EBF2 (ENSPPAG00000030675) #10	CDCA2 (ENSPPAG00000033215) #11	ENSPPAG00000030819 #12	GNRH1 (ENSPPAG00000028067) #13	DOCK5 (ENSPPAG00000040985) #14	NEFL (ENSPPAG00000039333) #16	NEFM (ENSPPAG00000029966)	ADAM7 (ENSPPAG00000042630) #17	ADAMDEC1 (ENSPPAG00000038047) #18	ADAM28 (ENSPPAG00000035327) #19	STC1 (ENSPPAG00000029446) #20	NKX2-6 (ENSPPAG00000027939) #21	NKX3-1 (ENSPPAG00000027435) #22	ENSPPAG00000033094	SLC25A37 (ENSPPAG00000018748) #23	ENSPPAG00000033689	ENTPD4 (ENSPPAG00000029950) #28	LOXL2 (ENSPPAG00000018080) #29	R3HCC1 (ENSPPAG00000033165) #30	CHMP7 (ENSPPAG00000044136) #31	TNFRSF10A (ENSPPAG00000040961)	TNFRSF10D (ENSPPAG00000034029)	TNFRSF10C (ENSPPAG00000029426)	TNFRSF10B (ENSPPAG00000001205)	RHOBTB2 (ENSPPAG00000030792) #33	PEBP4 (ENSPPAG00000042228) #34	EGR3 (ENSPPAG00000029705) #35	ENSPPAG00000041045
Human	MODERN SPECIES	20	PNMA2 (ENSG00000240694) #7	BNIP3L (ENSG00000104765) #8	PPP2R2A (ENSG00000221914) #9	EBF2 (ENSG00000221818) #10	CDCA2 (ENSG00000184661) #11	KCTD9 (ENSG00000104756) #12	GNRH1 (ENSG00000147437) #13	DOCK5 (ENSG00000147459) #14	NEFL (ENSG00000277586) #16	NEFM (ENSG00000104722)	ADAM7 (ENSG00000069206) #17	ADAMDEC1 (ENSG00000134028) #18	ADAM28 (ENSG00000042980) #19	STC1 (ENSG00000159167) #20	NKX2-6 (ENSG00000180053) #21	NKX3-1 (ENSG00000167034) #22	SLC25A37 (ENSG00000147454) #23	ENTPD4 (ENSG00000197217) #28	LOXL2 (ENSG00000134013) #29	R3HCC1 (ENSG00000104679) #30	CHMP7 (ENSG00000147457) #31	TNFRSF10A (ENSG00000104689)	TNFRSF10D (ENSG00000173530)	TNFRSF10C (ENSG00000173535)	ENSG00000284956	TNFRSF10B (ENSG00000120889)	RHOBTB2 (ENSG00000008853) #33	PEBP4 (ENSG00000134020) #34	EGR3 (ENSG00000179388) #35	BIN3 (ENSG00000147439) #36	CCAR2 (ENSG00000158941) #37
Gorilla	MODERN SPECIES	21	BNIP3L (ENSGGOG00000041240) #8	ENSGGOG00000027436	PPP2R2A (ENSGGOG00000011500) #9	EBF2 (ENSGGOG00000001585) #10	CDCA2 (ENSGGOG00000022784) #11	KCTD9 (ENSGGOG00000004480) #12	GNRH1 (ENSGGOG00000004479) #13	DOCK5 (ENSGGOG00000004460) #14	NEFL (ENSGGOG00000001429) #16	NEFM (ENSGGOG00000009880)	ADAM7 (ENSGGOG00000001012) #17	ADAMDEC1 (ENSGGOG00000001215) #18	ADAM28 (ENSGGOG00000017021) #19	STC1 (ENSGGOG00000026322) #20	NKX2-6 (ENSGGOG00000014372) #21	NKX3-1 (ENSGGOG00000041851) #22	ENSGGOG00000027906	SLC25A37 (ENSGGOG00000005025) #23	ENTPD4 (ENSGGOG00000010428) #28	LOXL2 (ENSGGOG00000013825) #29	R3HCC1 (ENSGGOG00000013817) #30	CHMP7 (ENSGGOG00000002536) #31	TNFRSF10A (ENSGGOG00000002170)	TNFRSF10D (ENSGGOG00000008019)	TNFRSF10C (ENSGGOG00000037003)	TNFRSF10B (ENSGGOG00000011051)	PEBP4 (ENSGGOG00000002433) #34	EGR3 (ENSGGOG00000002431) #35	BIN3 (ENSGGOG00000002428) #36	CCAR2 (ENSGGOG00000002424) #37	ENSGGOG00000002421
Orangutan	MODERN SPECIES	21	BNIP3L (ENSPPYG00000038394) #8	PPP2R2A (ENSPPYG00000018455) #9	EBF2 (ENSPPYG00000018454) #10	CDCA2 (ENSPPYG00000018453) #11	KCTD9 (ENSPPYG00000018452) #12	GNRH1 (ENSPPYG00000018451) #13	DOCK5 (ENSPPYG00000031126) #14	ENSPPYG00000033175	NEFL (ENSPPYG00000018449) #16	NEFM (ENSPPYG00000018448)	ADAM7 (ENSPPYG00000018447) #17	ADAMDEC1 (ENSPPYG00000018446) #18	ADAM28 (ENSPPYG00000018445) #19	STC1 (ENSPPYG00000018444) #20	NKX2-6 (ENSPPYG00000018443) #21	NKX3-1 (ENSPPYG00000018442) #22	ENSPPYG00000031644	ENSPPYG00000018439	ENSPPYG00000018438 #23	LOXL2 (ENSPPYG00000018437) #29	R3HCC1 (ENSPPYG00000018436) #30	CHMP7 (ENSPPYG00000018435) #31	TNFRSF10A (ENSPPYG00000031309)	TNFRSF10D (ENSPPYG00000018433)	ENSPPYG00000018432	TNFRSF10B (ENSPPYG00000018431)	RHOBTB2 (ENSPPYG00000018430) #33	PEBP4 (ENSPPYG00000018429) #34	EGR3 (ENSPPYG00000018428) #35	ENSPPYG00000018427 #36	CCAR2 (ENSPPYG00000018426) #37
Gibbon	MODERN SPECIES	23	PNMA2 (ENSNLEG00000019079) #7	BNIP3L (ENSNLEG00000016221) #8	PPP2R2A (ENSNLEG00000028888) #9	EBF2 (ENSNLEG00000016189) #10	CDCA2 (ENSNLEG00000016169) #11	KCTD9 (ENSNLEG00000016156) #12	GNRH1 (ENSNLEG00000032497) #13	DOCK5 (ENSNLEG00000016075) #14	NEFL (ENSNLEG00000016066) #16	ENSNLEG00000016060 #15	ADAM7 (ENSNLEG00000016022) #17	ADAMDEC1 (ENSNLEG00000015990) #18	ADAM28 (ENSNLEG00000015981) #19	STC1 (ENSNLEG00000015971) #20	NKX2-6 (ENSNLEG00000015970) #21	NKX3-1 (ENSNLEG00000030037) #22	ENSNLEG00000029971	ENSNLEG00000035146	SLC25A37 (ENSNLEG00000015964) #23	ENTPD4 (ENSNLEG00000015948) #28	LOXL2 (ENSNLEG00000026866) #29	R3HCC1 (ENSNLEG00000015944) #30	CHMP7 (ENSNLEG00000015905) #31	TNFRSF10A (ENSNLEG00000015888)	ENSNLEG00000033814	ENSNLEG00000015879	RHOBTB2 (ENSNLEG00000015848) #33	ENSNLEG00000033467 #34	EGR3 (ENSNLEG00000015829) #35	BIN3 (ENSNLEG00000029150) #36	CCAR2 (ENSNLEG00000015683) #37
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00390000013415.a.b #8	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00390000013415.a.b #8	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36
Vervet Monkey	MODERN SPECIES	27	BNIP3L (ENSCSAG00000016055) #8	PPP2R2A (ENSCSAG00000016060) #9	ENSCSAG00000016062 #10	ENSCSAG00000016068 #10	CDCA2 (ENSCSAG00000016076) #11	ENSCSAG00000016100 #12	GNRH1 (ENSCSAG00000016109) #13	DOCK5 (ENSCSAG00000016128) #14	NEFL (ENSCSAG00000016132) #16	NEFM (ENSCSAG00000016135)	ADAM7 (ENSCSAG00000016187) #17	ADAMDEC1 (ENSCSAG00000016207) #18	ADAM28 (ENSCSAG00000016220) #19	STC1 (ENSCSAG00000016224) #20	NKX2-6 (ENSCSAG00000016228) #21	NKX3-1 (ENSCSAG00000016229) #22	SLC25A37 (ENSCSAG00000016232) #23	ENTPD4 (ENSCSAG00000016236) #28	LOXL2 (ENSCSAG00000016241) #29	R3HCC1 (ENSCSAG00000016250) #30	CHMP7 (ENSCSAG00000016259) #31	TNFRSF10A (ENSCSAG00000016263)	TNFRSF10D (ENSCSAG00000016271)	TNFRSF10C (ENSCSAG00000016281)	TNFRSF10B (ENSCSAG00000016289)	RHOBTB2 (ENSCSAG00000016294) #33	PEBP4 (ENSCSAG00000016301) #34	EGR3 (ENSCSAG00000016304) #35	BIN3 (ENSCSAG00000016333) #36	CCAR2 (ENSCSAG00000016353) #37	C8orf58 (ENSCSAG00000016376)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00910000147586	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36
Macaca	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00910000147586	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00950000182882.B #36
Pig-tailed macaque	MODERN SPECIES	579	ENSMNEG00000010649	EBF2 (ENSMNEG00000040606) #10	ENSMNEG00000035457	CDCA2 (ENSMNEG00000036287) #11	KCTD9 (ENSMNEG00000044328) #12	GNRH1 (ENSMNEG00000042496) #13	DOCK5 (ENSMNEG00000043546) #14	ENSMNEG00000022002	NEFL (ENSMNEG00000039854) #16	NEFM (ENSMNEG00000028916)	ADAM7 (ENSMNEG00000041516) #17	ADAMDEC1 (ENSMNEG00000027019) #18	ADAM28 (ENSMNEG00000035956) #19	STC1 (ENSMNEG00000044899) #20	NKX2-6 (ENSMNEG00000029977) #21	NKX3-1 (ENSMNEG00000029607) #22	SLC25A37 (ENSMNEG00000033209) #23	ENSMNEG00000042125	ENTPD4 (ENSMNEG00000028969) #28	LOXL2 (ENSMNEG00000041821) #29	R3HCC1 (ENSMNEG00000043283) #30	CHMP7 (ENSMNEG00000035503) #31	TNFRSF10D (ENSMNEG00000042359)	TNFRSF10A (ENSMNEG00000034319)	ENSMNEG00000044970	TNFRSF10B (ENSMNEG00000035485)	RHOBTB2 (ENSMNEG00000041610) #33	PEBP4 (ENSMNEG00000030811) #34	EGR3 (ENSMNEG00000035687) #35	BIN3 (ENSMNEG00000016873) #36	ENSMNEG00000029252
Macaca_a	ANCESTRAL SPECIES	16	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37
Rhesus	MODERN SPECIES	18	PPP2R2A (ENSMMUG00000041905) #9	EBF2 (ENSMMUG00000005760) #10	CDCA2 (ENSMMUG00000010582) #11	KCTD9 (ENSMMUG00000010151) #12	GNRH1 (ENSMMUG00000029018) #13	DOCK5 (ENSMMUG00000008028) #14	NEFL (ENSMMUG00000003348) #16	NEFM (ENSMMUG00000000639)	ENSMMUG00000058642	ENSMMUG00000054167	ADAM7 (ENSMMUG00000007909) #17	ADAMDEC1 (ENSMMUG00000005318) #18	ADAM28 (ENSMMUG00000005317) #19	STC1 (ENSMMUG00000046186) #20	NKX2-6 (ENSMMUG00000020863) #21	NKX3-1 (ENSMMUG00000009796) #22	ENSMMUG00000064526	SLC25A37 (ENSMMUG00000054404) #23	ENTPD4 (ENSMMUG00000016658) #28	LOXL2 (ENSMMUG00000050549) #29	R3HCC1 (ENSMMUG00000016655) #30	CHMP7 (ENSMMUG00000016653) #31	TNFRSF10A (ENSMMUG00000007542)	ENSMMUG00000014947	ENSMMUG00000061712	TNFRSF10B (ENSMMUG00000048076)	RHOBTB2 (ENSMMUG00000007540) #33	ENSMMUG00000052501	PEBP4 (ENSMMUG00000018345) #34	EGR3 (ENSMMUG00000058396) #35	BIN3 (ENSMMUG00000021994) #36
Crab-eating macaque	MODERN SPECIES	18	BNIP3L (ENSMFAG00000003324) #8	PPP2R2A (ENSMFAG00000045160) #9	EBF2 (ENSMFAG00000036796) #10	CDCA2 (ENSMFAG00000044937) #11	KCTD9 (ENSMFAG00000000476) #12	GNRH1 (ENSMFAG00000052417) #13	DOCK5 (ENSMFAG00000001732) #14	NEFL (ENSMFAG00000031550) #16	ENSMFAG00000044080 #15	ENSMFAG00000057085	ADAM7 (ENSMFAG00000045244) #17	ADAMDEC1 (ENSMFAG00000007172) #18	ADAM28 (ENSMFAG00000039137) #19	STC1 (ENSMFAG00000060775) #20	NKX2-6 (ENSMFAG00000040141) #21	NKX3-1 (ENSMFAG00000047611) #22	SLC25A37 (ENSMFAG00000027746) #23	ENTPD4 (ENSMFAG00000037815) #28	LOXL2 (ENSMFAG00000041868) #29	R3HCC1 (ENSMFAG00000032894) #30	CHMP7 (ENSMFAG00000031228) #31	ENSMFAG00000009371	ENSMFAG00000065248	TNFRSF10A (ENSMFAG00000029610)	ENSMFAG00000051335	TNFRSF10B (ENSMFAG00000002092)	RHOBTB2 (ENSMFAG00000036619) #33	PEBP4 (ENSMFAG00000036169) #34	EGR3 (ENSMFAG00000065520) #35	ENSMFAG00000047841	BIN3 (ENSMFAG00000042420) #36
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00910000147586	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36
Olive baboon	MODERN SPECIES	18	ENSPANG00000048024	EBF2 (ENSPANG00000020231) #10	CDCA2 (ENSPANG00000008115) #11	KCTD9 (ENSPANG00000019100) #12	DOCK5 (ENSPANG00000005750) #14	NEFL (ENSPANG00000011988) #16	NEFM (ENSPANG00000018460)	ENSPANG00000038971	ENSPANG00000030915	ADAM7 (ENSPANG00000017131) #17	ADAMDEC1 (ENSPANG00000022045) #18	ADAM28 (ENSPANG00000005176) #19	ENSPANG00000005177	STC1 (ENSPANG00000048289) #20	NKX2-6 (ENSPANG00000019014) #21	NKX3-1 (ENSPANG00000004934) #22	SLC25A37 (ENSPANG00000000653) #23	ENTPD4 (ENSPANG00000000652) #28	LOXL2 (ENSPANG00000011564) #29	R3HCC1 (ENSPANG00000000453) #30	CHMP7 (ENSPANG00000024531) #31	TNFRSF10A (ENSPANG00000005889)	ENSPANG00000033702	ENSPANG00000046450	TNFRSF10B (ENSPANG00000009912)	RHOBTB2 (ENSPANG00000020434) #33	PEBP4 (ENSPANG00000022788) #34	EGR3 (ENSPANG00000019015) #35	BIN3 (ENSPANG00000020851) #36	CCAR2 (ENSPANG00000018828) #37	C8orf58 (ENSPANG00000026225)
Cercopithecinae_d	ANCESTRAL SPECIES	50	ENSGT00390000012635.a.b	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00910000147586	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36
Sooty mangabey	MODERN SPECIES	555	ENSCATG00000045206	PPP2R2A (ENSCATG00000037089) #9	EBF2 (ENSCATG00000039203) #10	CDCA2 (ENSCATG00000031991) #11	KCTD9 (ENSCATG00000038906) #12	GNRH1 (ENSCATG00000041582) #13	DOCK5 (ENSCATG00000043562) #14	ENSCATG00000030152	NEFL (ENSCATG00000042551) #16	NEFM (ENSCATG00000042530)	ADAM7 (ENSCATG00000041478) #17	ADAMDEC1 (ENSCATG00000043054) #18	ADAM28 (ENSCATG00000043598) #19	STC1 (ENSCATG00000026956) #20	NKX2-6 (ENSCATG00000045337) #21	NKX3-1 (ENSCATG00000008649) #22	SLC25A37 (ENSCATG00000035944) #23	ENSCATG00000035953	ENSCATG00000036960	ENTPD4 (ENSCATG00000041935) #28	LOXL2 (ENSCATG00000038025) #29	R3HCC1 (ENSCATG00000032971) #30	CHMP7 (ENSCATG00000015291) #31	TNFRSF10A (ENSCATG00000029264)	TNFRSF10D (ENSCATG00000043425)	TNFRSF10C (ENSCATG00000038580)	TNFRSF10B (ENSCATG00000038988)	RHOBTB2 (ENSCATG00000035570) #33	PEBP4 (ENSCATG00000030855) #34	EGR3 (ENSCATG00000030973) #35	BIN3 (ENSCATG00000039415) #36
Rhinopithecus	ANCESTRAL SPECIES	55	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.k.b.b.a #12	ENSGT00940000154314.k.b.a #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00910000147038	ENSGT00940000158607 #23
Black snub-nosed monkey	MODERN SPECIES	98	ENSRBIG00000031494	PPP2R2A (ENSRBIG00000028497) #9	EBF2 (ENSRBIG00000011662) #10	ENSRBIG00000026024	CDCA2 (ENSRBIG00000039250) #11	ENSRBIG00000044540 #12	GNRH1 (ENSRBIG00000042433) #13	DOCK5 (ENSRBIG00000022198) #14	NEFL (ENSRBIG00000033397) #16	NEFM (ENSRBIG00000044501)	ADAM7 (ENSRBIG00000022906) #17	ADAMDEC1 (ENSRBIG00000032045) #18	ADAM28 (ENSRBIG00000020078) #19	STC1 (ENSRBIG00000032107) #20	NKX2-6 (ENSRBIG00000041260) #21	NKX3-1 (ENSRBIG00000023436) #22	SLC25A37 (ENSRBIG00000032128) #23	ENSRBIG00000038195	ENSRBIG00000006016	ENTPD4 (ENSRBIG00000006283) #28	LOXL2 (ENSRBIG00000040838) #29	R3HCC1 (ENSRBIG00000028045) #30	CHMP7 (ENSRBIG00000002287) #31	TNFRSF10A (ENSRBIG00000030697)
Golden snub-nosed monkey	MODERN SPECIES	3147														STC1 (ENSRROG00000042390) #20	NKX2-6 (ENSRROG00000041779) #21	NKX3-1 (ENSRROG00000035532) #22	ENSRROG00000042740	SLC25A37 (ENSRROG00000009524) #23	ENSRROG00000035963	ENSRROG00000020274 #28
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.l #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT00910000147907	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164831	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B.g #36	ENSGT00530000063672.b #37	ENSGT00390000000531
Cebidae	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.l #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B.g.b #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Cebidae_a	ANCESTRAL SPECIES	44	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314.l #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000164765	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B.g.b #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Capuchin	MODERN SPECIES	221			ENSCCAG00000017319 #10	CDCA2 (ENSCCAG00000026541) #11	ENSCCAG00000030611 #12	GNRH1 (ENSCCAG00000030404) #13	DOCK5 (ENSCCAG00000033128) #14	ENSCCAG00000004867	NEFL (ENSCCAG00000035869) #16	NEFM (ENSCCAG00000028697)	ADAM7 (ENSCCAG00000028360) #17	ADAMDEC1 (ENSCCAG00000034847) #18	ADAM28 (ENSCCAG00000021142) #19	STC1 (ENSCCAG00000029913) #20	NKX2-6 (ENSCCAG00000030537) #21	NKX3-1 (ENSCCAG00000029164) #22	SLC25A37 (ENSCCAG00000029132) #23	ENTPD4 (ENSCCAG00000022243) #28	LOXL2 (ENSCCAG00000032063) #29	R3HCC1 (ENSCCAG00000037811) #30	CHMP7 (ENSCCAG00000028089) #31	TNFRSF10A (ENSCCAG00000028468)	TNFRSF10B (ENSCCAG00000020824)	RHOBTB2 (ENSCCAG00000027624) #33	PEBP4 (ENSCCAG00000035666) #34	EGR3 (ENSCCAG00000030322) #35	ENSCCAG00000031619 #36	CCAR2 (ENSCCAG00000026081) #37	C8orf58 (ENSCCAG00000036764)	PDLIM2 (ENSCCAG00000038057)	SORBS3 (ENSCCAG00000027374)
Bolivian squirrel monkey	MODERN SPECIES	132	DPYSL2 (ENSSBOG00000022904)	BNIP3L (ENSSBOG00000001484) #8	PPP2R2A (ENSSBOG00000022095) #9	EBF2 (ENSSBOG00000029332) #10	CDCA2 (ENSSBOG00000025034) #11	KCTD9 (ENSSBOG00000020467) #12	GNRH1 (ENSSBOG00000030355) #13	DOCK5 (ENSSBOG00000018389) #14	ENSSBOG00000031985 #16	ENSSBOG00000026028 #15	ADAM7 (ENSSBOG00000033466) #17	ADAMDEC1 (ENSSBOG00000023422) #18	ADAM28 (ENSSBOG00000021104) #19	STC1 (ENSSBOG00000008335) #20	NKX2-6 (ENSSBOG00000001212) #21	NKX3-1 (ENSSBOG00000031270) #22	ENSSBOG00000030155	ENSSBOG00000027698	SLC25A37 (ENSSBOG00000033528) #23	ENTPD4 (ENSSBOG00000023265) #28	LOXL2 (ENSSBOG00000025403) #29	R3HCC1 (ENSSBOG00000022590) #30	CHMP7 (ENSSBOG00000021845) #31	TNFRSF10A (ENSSBOG00000030969)	ENSSBOG00000032163	ENSSBOG00000015163	TNFRSF10B (ENSSBOG00000031524)	RHOBTB2 (ENSSBOG00000034058) #33	PEBP4 (ENSSBOG00000031968) #34	EGR3 (ENSSBOG00000013814) #35	ENSSBOG00000021528 #36
Marmoset	MODERN SPECIES	4	KCTD9 (ENSCJAG00000019969) #12	DOCK5 (ENSCJAG00000019986) #14	NEFL (ENSCJAG00000020035) #16	ENSCJAG00000010608	ENSCJAG00000082023	NEFM (ENSCJAG00000020047)	ENSCJAG00000076019	ENSCJAG00000070069	ADAM7 (ENSCJAG00000020053) #17	ADAMDEC1 (ENSCJAG00000020062) #18	ADAM28 (ENSCJAG00000020075) #19	ENSCJAG00000064111	ENSCJAG00000082609	STC1 (ENSCJAG00000081929) #20	NKX2-6 (ENSCJAG00000085390) #21	NKX3-1 (ENSCJAG00000060555) #22	ENSCJAG00000061125	SLC25A37 (ENSCJAG00000076826) #23	LOXL2 (ENSCJAG00000020099) #29	R3HCC1 (ENSCJAG00000020118) #30	CHMP7 (ENSCJAG00000020123) #31	TNFRSF10A (ENSCJAG00000041514)	TNFRSF10B (ENSCJAG00000020135)	RHOBTB2 (ENSCJAG00000020143) #33	PEBP4 (ENSCJAG00000020158) #34	EGR3 (ENSCJAG00000059573) #35	ENSCJAG00000020166 #36	CCAR2 (ENSCJAG00000020174) #37	C8orf58 (ENSCJAG00000020218)	PDLIM2 (ENSCJAG00000020226)	SORBS3 (ENSCJAG00000020235)
Mas night monkey	MODERN SPECIES	974	ENSANAG00000031085	BNIP3L (ENSANAG00000025801) #8	PPP2R2A (ENSANAG00000033237) #9	EBF2 (ENSANAG00000022835) #10	CDCA2 (ENSANAG00000037820) #11	ENSANAG00000025804 #12	GNRH1 (ENSANAG00000034874) #13	DOCK5 (ENSANAG00000032901) #14	NEFL (ENSANAG00000022798) #16	NEFM (ENSANAG00000029941)	ADAM7 (ENSANAG00000024071) #17	ADAMDEC1 (ENSANAG00000023742) #18	ADAM28 (ENSANAG00000026076) #19	STC1 (ENSANAG00000026165) #20	NKX2-6 (ENSANAG00000027024) #21	NKX3-1 (ENSANAG00000037342) #22	SLC25A37 (ENSANAG00000035262) #23	ENSANAG00000034733	ENTPD4 (ENSANAG00000038166) #28	LOXL2 (ENSANAG00000021247) #29	R3HCC1 (ENSANAG00000036169) #30	CHMP7 (ENSANAG00000019835) #31	TNFRSF10A (ENSANAG00000036835)	TNFRSF10D (ENSANAG00000024101)	TNFRSF10B (ENSANAG00000032145)	RHOBTB2 (ENSANAG00000022868) #33	PEBP4 (ENSANAG00000033373) #34	EGR3 (ENSANAG00000037983) #35	ENSANAG00000001773 #36	CCAR2 (ENSANAG00000037041) #37	C8orf58 (ENSANAG00000026815)
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Eulipotyphla	ANCESTRAL SPECIES	1908															ENSGT00940000162737 #21	ENSGT00940000160930 #22
Hedgehog	MODERN SPECIES	15659															NKX2-6 (ENSEEUG00000001108) #21	NKX3-1 (ENSEEUG00000001113) #22
Common shrew	MODERN SPECIES	7992																ENSSARG00000001895 #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Chiroptera	ANCESTRAL SPECIES	64	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Microchiroptera	ANCESTRAL SPECIES	57	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Greater horseshoe bat	MODERN SPECIES	9	PPP2R2A (ENSRFEG00010006444) #9	EBF2 (ENSRFEG00010006593) #10	CDCA2 (ENSRFEG00010006703) #11	KCTD9 (ENSRFEG00010006936) #12	GNRH1 (ENSRFEG00010006984) #13	DOCK5 (ENSRFEG00010007027) #14	NEFL (ENSRFEG00010007163) #16	ENSRFEG00010007201 #15	ADAM7 (ENSRFEG00010007316) #17	ADAMDEC1 (ENSRFEG00010007930) #18	ADAM28 (ENSRFEG00010007990) #19	STC1 (ENSRFEG00010008368) #20	ENSRFEG00010008447	ENSRFEG00010008464	NKX2-6 (ENSRFEG00010008490) #21	NKX3-1 (ENSRFEG00010008525) #22	SLC25A37 (ENSRFEG00010008583) #23	ENTPD4 (ENSRFEG00010008625) #28	LOXL2 (ENSRFEG00010008683) #29	R3HCC1 (ENSRFEG00010008730) #30	CHMP7 (ENSRFEG00010008763) #31	ENSRFEG00010008806	ENSRFEG00010008858	RHOBTB2 (ENSRFEG00010008927) #33	PEBP4 (ENSRFEG00010009078) #34	EGR3 (ENSRFEG00010009121) #35	BIN3 (ENSRFEG00010009192) #36	CCAR2 (ENSRFEG00010009297) #37	C8orf58 (ENSRFEG00010009386)	ENSRFEG00010009418	SORBS3 (ENSRFEG00010009553)
Microbat	MODERN SPECIES	1085	DPYSL2 (ENSMLUG00000000271)	BNIP3L (ENSMLUG00000014949) #8	PPP2R2A (ENSMLUG00000030355) #9	EBF2 (ENSMLUG00000011509) #10	CDCA2 (ENSMLUG00000006321) #11	KCTD9 (ENSMLUG00000006310) #12	GNRH1 (ENSMLUG00000006306) #13	DOCK5 (ENSMLUG00000006278) #14	ENSMLUG00000029940 #15	ADAM7 (ENSMLUG00000009580) #17	ADAMDEC1 (ENSMLUG00000009552) #18	ADAM28 (ENSMLUG00000009526) #19	ENSMLUG00000027935	ENSMLUG00000023520	STC1 (ENSMLUG00000010663) #20	NKX3-1 (ENSMLUG00000006118) #22
Megabat	MODERN SPECIES	1233															NKX2-6 (ENSPVAG00000005380) #21	NKX3-1 (ENSPVAG00000005378) #22	ENSPVAG00000005377	SLC25A37 (ENSPVAG00000005376) #23
Equus	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.j	ENSGT00940000162957.i	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Donkey	MODERN SPECIES	22	PNMA2 (ENSEASG00005035920) #7	EBF2 (ENSEASG00005015624) #10	CDCA2 (ENSEASG00005015623) #11	KCTD9 (ENSEASG00005015621) #12	GNRH1 (ENSEASG00005015619) #13	DOCK5 (ENSEASG00005015240) #14	ENSEASG00005032794	NEFL (ENSEASG00005015035) #16	NEFM (ENSEASG00005015031)	ENSEASG00005018749 #17	ENSEASG00005025876 #17	ADAMDEC1 (ENSEASG00005018757) #18	ADAM28 (ENSEASG00005018766) #19	STC1 (ENSEASG00005025792) #20	NKX2-6 (ENSEASG00005018774) #21	NKX3-1 (ENSEASG00005018775) #22	SLC25A37 (ENSEASG00005026222) #23	ENTPD4 (ENSEASG00005018778) #28	LOXL2 (ENSEASG00005018781) #29	R3HCC1 (ENSEASG00005018782) #30	CHMP7 (ENSEASG00005018783) #31	ENSEASG00005036200	ENSEASG00005036097	RHOBTB2 (ENSEASG00005018788) #33	PEBP4 (ENSEASG00005018790) #34	EGR3 (ENSEASG00005029305) #35	BIN3 (ENSEASG00005018792) #36	CCAR2 (ENSEASG00005018793) #37	C8orf58 (ENSEASG00005018796)	PDLIM2 (ENSEASG00005018800)	SORBS3 (ENSEASG00005018804)
Horse	MODERN SPECIES	11	ENSECAG00000051786	ENSECAG00000032941	ENSECAG00000048777	CDCA2 (ENSECAG00000013188) #11	KCTD9 (ENSECAG00000011535) #12	GNRH1 (ENSECAG00000010664) #13	DOCK5 (ENSECAG00000023607) #14	NEFL (ENSECAG00000022890) #16	NEFM (ENSECAG00000022370)	ADAM7 (ENSECAG00000020537) #17	ADAMDEC1 (ENSECAG00000019922) #18	ADAM28 (ENSECAG00000014577) #19	ENSECAG00000053236	STC1 (ENSECAG00000013731) #20	NKX2-6 (ENSECAG00000028673) #21	NKX3-1 (ENSECAG00000001509) #22	SLC25A37 (ENSECAG00000013319) #23	ENTPD4 (ENSECAG00000010493) #28	LOXL2 (ENSECAG00000025038) #29	R3HCC1 (ENSECAG00000025013) #30	CHMP7 (ENSECAG00000024657) #31	ENSECAG00000036031	ENSECAG00000024512	RHOBTB2 (ENSECAG00000024136) #33	PEBP4 (ENSECAG00000023802) #34	EGR3 (ENSECAG00000023741) #35	BIN3 (ENSECAG00000022315) #36	CCAR2 (ENSECAG00000020651) #37	C2H8orf58 (ENSECAG00000020618)	PDLIM2 (ENSECAG00000019910)	SORBS3 (ENSECAG00000017281)
Carnivora	ANCESTRAL SPECIES	5	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.q.a #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Caniformia	ANCESTRAL SPECIES	7	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.q.a #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.q.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Mustelinae	ANCESTRAL SPECIES	104			ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
American mink	MODERN SPECIES	232														STC1 (ENSNVIG00000023570) #20	NKX2-6 (ENSNVIG00000023566) #21	NKX3-1 (ENSNVIG00000023562) #22	SLC25A37 (ENSNVIG00000023560) #23	ENSNVIG00000023559	ENTPD4 (ENSNVIG00000023555) #28	LOXL2 (ENSNVIG00000023548) #29	R3HCC1 (ENSNVIG00000023544) #30	CHMP7 (ENSNVIG00000023539) #31	RHOBTB2 (ENSNVIG00000023533) #33	PEBP4 (ENSNVIG00000023531) #34	EGR3 (ENSNVIG00000023524) #35	BIN3 (ENSNVIG00000023519) #36	CCAR2 (ENSNVIG00000023506) #37	C8orf58 (ENSNVIG00000023502)	PDLIM2 (ENSNVIG00000023477)	VINEX (ENSNVIG00000023464)	PPP3CC (ENSNVIG00000023435)
Ferret	MODERN SPECIES	256	PPP2R2A (ENSMPUG00000003186) #9	EBF2 (ENSMPUG00000003195) #10	ENSMPUG00000003203	CDCA2 (ENSMPUG00000003208) #11	KCTD9 (ENSMPUG00000003214) #12	GNRH1 (ENSMPUG00000003219) #13	DOCK5 (ENSMPUG00000003228) #14	NEFL (ENSMPUG00000003244) #16	ENSMPUG00000003249 #15	ADAM7 (ENSMPUG00000003252) #17	ENSMPUG00000018762	ADAMDEC1 (ENSMPUG00000003330) #18	ADAM28 (ENSMPUG00000003381) #19	STC1 (ENSMPUG00000003399) #20	NKX2-6 (ENSMPUG00000003409) #21	NKX3-1 (ENSMPUG00000003418) #22	SLC25A37 (ENSMPUG00000003422) #23	ENTPD4 (ENSMPUG00000003442) #28	LOXL2 (ENSMPUG00000003449) #29	R3HCC1 (ENSMPUG00000003457) #30	ENSMPUG00000003465	CHMP7 (ENSMPUG00000003471) #31	RHOBTB2 (ENSMPUG00000003474) #33	PEBP4 (ENSMPUG00000003480) #34	EGR3 (ENSMPUG00000003485) #35	CCAR2 (ENSMPUG00000003486) #37	BIN3 (ENSMPUG00000003498) #36	C8orf58 (ENSMPUG00000003516)	PDLIM2 (ENSMPUG00000003539)	SORBS3 (ENSMPUG00000003610)	PPP3CC (ENSMPUG00000003630)
Ursidae	ANCESTRAL SPECIES	50	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b.q.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Giant Panda	MODERN SPECIES	15	PNMA2 (ENSAMEG00000023900) #7	BNIP3L (ENSAMEG00000000287) #8	PPP2R2A (ENSAMEG00000000302) #9	EBF2 (ENSAMEG00000000326) #10	CDCA2 (ENSAMEG00000000346) #11	KCTD9 (ENSAMEG00000000365) #12	GNRH1 (ENSAMEG00000000386) #13	DOCK5 (ENSAMEG00000000393) #14	NEFL (ENSAMEG00000000584) #16	ENSAMEG00000000596 #15	ADAM7 (ENSAMEG00000001607) #17	ADAMDEC1 (ENSAMEG00000001578) #18	ADAM28 (ENSAMEG00000001508) #19	STC1 (ENSAMEG00000024356) #20	NKX2-6 (ENSAMEG00000002863) #21	NKX3-1 (ENSAMEG00000026096) #22	SLC25A37 (ENSAMEG00000002868) #23	ENTPD4 (ENSAMEG00000002873) #28	LOXL2 (ENSAMEG00000002911) #29	R3HCC1 (ENSAMEG00000002963) #30	CHMP7 (ENSAMEG00000002969) #31	RHOBTB2 (ENSAMEG00000002993) #33	PEBP4 (ENSAMEG00000003010) #34	EGR3 (ENSAMEG00000003013) #35	BIN3 (ENSAMEG00000003027) #36	CCAR2 (ENSAMEG00000003044) #37	C8orf58 (ENSAMEG00000003077)	PDLIM2 (ENSAMEG00000003082)	PPP3CC (ENSAMEG00000003134)	SLC39A14 (ENSAMEG00000003151)	PIWIL2 (ENSAMEG00000003171)
Canidae	ANCESTRAL SPECIES	31	ENSGT00390000013415.a.b.q.a #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734.h #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00390000013415.a.b.q.a #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734.h #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Dog	MODERN SPECIES	17	PPP2R2A (ENSCAFG00845013645) #9	EBF2 (ENSCAFG00845013887) #10	ENSCAFG00845013986	ENSCAFG00845014017	CDCA2 (ENSCAFG00845014066) #11	KCTD9 (ENSCAFG00845014154) #12	GNRH1 (ENSCAFG00845014221) #13	DOCK5 (ENSCAFG00845014289) #14	NEFL (ENSCAFG00845014438) #16	NEFM (ENSCAFG00845014497) #15	ADAM7 (ENSCAFG00845014694) #17	ADAMDEC1 (ENSCAFG00845014873) #18	ADAM28 (ENSCAFG00845015078) #19	STC1 (ENSCAFG00845015608) #20	NKX2-6 (ENSCAFG00845015839) #21	NKX3-1 (ENSCAFG00845015954) #22	SLC25A37 (ENSCAFG00845016130) #23	ENTPD4 (ENSCAFG00845016515) #28	LOXL2 (ENSCAFG00845017019) #29	R3HCC1 (ENSCAFG00845017316) #30	CHMP7 (ENSCAFG00845017718) #31	RHOBTB2 (ENSCAFG00845018128) #33	PEBP4 (ENSCAFG00845018869) #34	EGR3 (ENSCAFG00845019362) #35	BIN3 (ENSCAFG00845019490) #36	CCAR2 (ENSCAFG00845019929) #37	C8orf58 (ENSCAFG00845020195)	PDLIM2 (ENSCAFG00845020425)	SORBS3 (ENSCAFG00845020887)	PPP3CC (ENSCAFG00845022916)	SLC39A14 (ENSCAFG00845023697)
Dingo	MODERN SPECIES	304	ENSCAFG00020012600	PNMA2 (ENSCAFG00020012608) #7	ENSCAFG00020012611 #8	PPP2R2A (ENSCAFG00020012619) #9	EBF2 (ENSCAFG00020012629) #10	CDCA2 (ENSCAFG00020012668) #11	KCTD9 (ENSCAFG00020012683) #12	GNRH1 (ENSCAFG00020012686) #13	DOCK5 (ENSCAFG00020012698) #14	NEFM (ENSCAFG00020012742)	NEFL (ENSCAFG00020012757) #16	ADAM7 (ENSCAFG00020012781) #17	ADAM28 (ENSCAFG00020012819) #19	STC1 (ENSCAFG00020012841) #20	ENSCAFG00020012845 #21	NKX3-1 (ENSCAFG00020012847) #22	SLC25A37 (ENSCAFG00020012855) #23	ENSCAFG00020012856 #28	LOXL2 (ENSCAFG00020012866) #29	R3HCC1 (ENSCAFG00020012870) #30	CHMP7 (ENSCAFG00020012876) #31	RHOBTB2 (ENSCAFG00020012882) #33	PEBP4 (ENSCAFG00020012890) #34	EGR3 (ENSCAFG00020012893) #35	BIN3 (ENSCAFG00020012894) #36	ENSCAFG00020012898 #37	ENSCAFG00020012923 #37	C8orf58 (ENSCAFG00020012932)	PDLIM2 (ENSCAFG00020012938)	SORBS3 (ENSCAFG00020012942)	PPP3CC (ENSCAFG00020012963)
Red fox	MODERN SPECIES	67	EBF2 (ENSVVUG00000003772) #10	ENSVVUG00000004033 #11	ENSVVUG00000004038	KCTD9 (ENSVVUG00000004063) #12	GNRH1 (ENSVVUG00000004172) #13	ENSVVUG00000004182 #14	ENSVVUG00000004272 #14	ENSVVUG00000004850	NEFL (ENSVVUG00000004852) #16	NEFM (ENSVVUG00000004862)	ADAM7 (ENSVVUG00000004873) #17	ADAMDEC1 (ENSVVUG00000004882) #18	ADAM28 (ENSVVUG00000004891) #19	STC1 (ENSVVUG00000004921) #20	NKX2-6 (ENSVVUG00000004929) #21	ENSVVUG00000004932 #22	SLC25A37 (ENSVVUG00000004950) #23	ENTPD4 (ENSVVUG00000004962) #28	LOXL2 (ENSVVUG00000004974) #29	R3HCC1 (ENSVVUG00000005056) #30	CHMP7 (ENSVVUG00000005081) #31	RHOBTB2 (ENSVVUG00000005099) #33	PEBP4 (ENSVVUG00000005125) #34	EGR3 (ENSVVUG00000005144) #35	BIN3 (ENSVVUG00000005147) #36	CCAR2 (ENSVVUG00000005152) #37	CUNH8orf58 (ENSVVUG00000005160)	PDLIM2 (ENSVVUG00000005161)	SORBS3 (ENSVVUG00000005170)	PPP3CC (ENSVVUG00000005197)	SLC39A14 (ENSVVUG00000005212)
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000013415.a.b.q.a #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Panthera	ANCESTRAL SPECIES	5	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406.b #17	ENSGT00940000161406.a #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
Tiger	MODERN SPECIES	446	PNMA2 (ENSPTIG00000004671) #7	BNIP3L (ENSPTIG00000007550) #8	PPP2R2A (ENSPTIG00000004184) #9	EBF2 (ENSPTIG00000021987) #10	CDCA2 (ENSPTIG00000020815) #11	KCTD9 (ENSPTIG00000020189) #12	GNRH1 (ENSPTIG00000019710) #13	DOCK5 (ENSPTIG00000015263) #14	NEFL (ENSPTIG00000013748) #16	ENSPTIG00000013410 #15	ENSPTIG00000010903 #17	ENSPTIG00000008882 #17	ADAMDEC1 (ENSPTIG00000007220) #18	ADAM28 (ENSPTIG00000020425) #19	STC1 (ENSPTIG00000020203) #20	NKX3-1 (ENSPTIG00000019365) #22	SLC25A37 (ENSPTIG00000018510) #23	ENTPD4 (ENSPTIG00000014881) #28	LOXL2 (ENSPTIG00000013484) #29	R3HCC1 (ENSPTIG00000011230) #30	CHMP7 (ENSPTIG00000009000) #31	RHOBTB2 (ENSPTIG00000007097) #33	PEBP4 (ENSPTIG00000006490) #34	EGR3 (ENSPTIG00000005782) #35	BIN3 (ENSPTIG00000000447) #36	CCAR2 (ENSPTIG00000019114) #37	C8orf58 (ENSPTIG00000015907)	PDLIM2 (ENSPTIG00000010673)	SORBS3 (ENSPTIG00000007552)	PPP3CC (ENSPTIG00000022097)	SLC39A14 (ENSPTIG00000021976)
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406.b #17	ENSGT00940000161685.A.a #15	ENSGT00940000161406.a #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00940000157986
leopard	MODERN SPECIES	49	PPP2R2A (ENSPPRG00000023725) #9	EBF2 (ENSPPRG00000024264) #10	CDCA2 (ENSPPRG00000017681) #11	KCTD9 (ENSPPRG00000013953) #12	GNRH1 (ENSPPRG00000013600) #13	DOCK5 (ENSPPRG00000013437) #14	ENSPPRG00000011381 #16	NEFL (ENSPPRG00000010879) #16	NEFM (ENSPPRG00000009800)	ENSPPRG00000008890 #17	ENSPPRG00000007410 #17	ADAMDEC1 (ENSPPRG00000006694) #18	ADAM28 (ENSPPRG00000005754) #19	STC1 (ENSPPRG00000004675) #20	NKX2-6 (ENSPPRG00000004345) #21	NKX3-1 (ENSPPRG00000004152) #22	SLC25A37 (ENSPPRG00000003800) #23	ENTPD4 (ENSPPRG00000003654) #28	LOXL2 (ENSPPRG00000003080) #29	R3HCC1 (ENSPPRG00000002522) #30	CHMP7 (ENSPPRG00000001462) #31	RHOBTB2 (ENSPPRG00000000275) #33	PEBP4 (ENSPPRG00000017284) #34	EGR3 (ENSPPRG00000015837) #35	BIN3 (ENSPPRG00000014405) #36	CCAR2 (ENSPPRG00000013075) #37	C8orf58 (ENSPPRG00000012102)	PDLIM2 (ENSPPRG00000009469)	SORBS3 (ENSPPRG00000006181)	PPP3CC (ENSPPRG00000003854)	SLC39A14 (ENSPPRG00000000738)
lion	MODERN SPECIES	4	PNMA2 (ENSPLOG00000002750) #7	BNIP3L (ENSPLOG00000002778) #8	PPP2R2A (ENSPLOG00000002836) #9	EBF2 (ENSPLOG00000002904) #10	CDCA2 (ENSPLOG00000002958) #11	KCTD9 (ENSPLOG00000003006) #12	GNRH1 (ENSPLOG00000003031) #13	DOCK5 (ENSPLOG00000003063) #14	ENSPLOG00000003197 #15	NEFL (ENSPLOG00000003220) #16	ADAM7 (ENSPLOG00000003308) #17	ADAMDEC1 (ENSPLOG00000003417) #18	ADAM28 (ENSPLOG00000003535) #19	STC1 (ENSPLOG00000003716) #20	NKX2-6 (ENSPLOG00000003735) #21	NKX3-1 (ENSPLOG00000003755) #22	SLC25A37 (ENSPLOG00000003786) #23	ENTPD4 (ENSPLOG00000003831) #28	LOXL2 (ENSPLOG00000003867) #29	R3HCC1 (ENSPLOG00000003894) #30	CHMP7 (ENSPLOG00000003917) #31	RHOBTB2 (ENSPLOG00000003941) #33	PEBP4 (ENSPLOG00000003959) #34	EGR3 (ENSPLOG00000003981) #35	BIN3 (ENSPLOG00000004006) #36	CCAR2 (ENSPLOG00000004036) #37	C8orf58 (ENSPLOG00000004106)	PDLIM2 (ENSPLOG00000004126)	SORBS3 (ENSPLOG00000004161)	PPP3CC (ENSPLOG00000004219)	SLC39A14 (ENSPLOG00000004308)
Cat	MODERN SPECIES	235	BNIP3L (ENSFCAG00000030159) #8	PPP2R2A (ENSFCAG00000029721) #9	EBF2 (ENSFCAG00000003607) #10	ENSFCAG00000023720	CDCA2 (ENSFCAG00000011887) #11	KCTD9 (ENSFCAG00000011885) #12	GNRH1 (ENSFCAG00000029305) #13	DOCK5 (ENSFCAG00000011883) #14	NEFL (ENSFCAG00000013441) #16	NEFM (ENSFCAG00000029288)	ADAM7 (ENSFCAG00000013087) #17	ADAMDEC1 (ENSFCAG00000003531) #18	ADAM28 (ENSFCAG00000008957) #19	STC1 (ENSFCAG00000026611) #20	NKX2-6 (ENSFCAG00000038582) #21	NKX3-1 (ENSFCAG00000039688) #22	SLC25A37 (ENSFCAG00000005418) #23	ENTPD4 (ENSFCAG00000005417) #28	LOXL2 (ENSFCAG00000012400) #29	R3HCC1 (ENSFCAG00000012395) #30	CHMP7 (ENSFCAG00000031450) #31	RHOBTB2 (ENSFCAG00000005670) #33	PEBP4 (ENSFCAG00000029653) #34	EGR3 (ENSFCAG00000005668) #35	BIN3 (ENSFCAG00000005667) #36	CCAR2 (ENSFCAG00000005666) #37	CB1H8orf58 (ENSFCAG00000024843)	PDLIM2 (ENSFCAG00000005664)	SORBS3 (ENSFCAG00000005663)	PPP3CC (ENSFCAG00000030895)	SLC39A14 (ENSFCAG00000001452)
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Suina	ANCESTRAL SPECIES	42	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Chacoan peccary	MODERN SPECIES	813	PNMA2 (ENSCWAG00000012323) #7	BNIP3L (ENSCWAG00000012345) #8	PPP2R2A (ENSCWAG00000012404) #9	EBF2 (ENSCWAG00000012599) #10	CDCA2 (ENSCWAG00000012969) #11	KCTD9 (ENSCWAG00000013249) #12	GNRH1 (ENSCWAG00000013307) #13	DOCK5 (ENSCWAG00000013368) #14	NEFL (ENSCWAG00000013873) #16	ENSCWAG00000013920 #15	ADAM7 (ENSCWAG00000013998) #17	ADAMDEC1 (ENSCWAG00000014486) #18	ADAM28 (ENSCWAG00000014725) #19	STC1 (ENSCWAG00000014909) #20	NKX2-6 (ENSCWAG00000014986) #21	NKX3-1 (ENSCWAG00000015012) #22	SLC25A37 (ENSCWAG00000015044) #23	ENTPD4 (ENSCWAG00000015072) #28	LOXL2 (ENSCWAG00000015127) #29	R3HCC1 (ENSCWAG00000015202) #30	CHMP7 (ENSCWAG00000015296) #31	RHOBTB2 (ENSCWAG00000015338) #33	PEBP4 (ENSCWAG00000015546) #34	EGR3 (ENSCWAG00000015603) #35	BIN3 (ENSCWAG00000015644) #36	CCAR2 (ENSCWAG00000015750) #37	C8orf58 (ENSCWAG00000015807)	PDLIM2 (ENSCWAG00000015849)	SORBS3 (ENSCWAG00000015893)	PPP3CC (ENSCWAG00000016041)	SLC39A14 (ENSCWAG00000016115)
Pig	MODERN SPECIES	5	EBF2 (ENSSSCG00000009655) #10	ENSSSCG00000042774	CDCA2 (ENSSSCG00000009653) #11	KCTD9 (ENSSSCG00000009652) #12	GNRH1 (ENSSSCG00000009651) #13	DOCK5 (ENSSSCG00000009650) #14	NEFL (ENSSSCG00000009649) #16	ENSSSCG00000009648 #15	ENSSSCG00000060373	ENSSSCG00000057307	ADAM7 (ENSSSCG00000009646) #17	ADAMDEC1 (ENSSSCG00000009645) #18	ADAM28 (ENSSSCG00000009644) #19	STC1 (ENSSSCG00000009642) #20	NKX2-6 (ENSSSCG00000028064) #21	NKX3-1 (ENSSSCG00000031924) #22	ENSSSCG00000033037 #23	ENTPD4 (ENSSSCG00000031871) #28	LOXL2 (ENSSSCG00000033608) #29	ENSSSCG00000039915 #30	CHMP7 (ENSSSCG00000033113) #31	ENSSSCG00000058071	ENSSSCG00000009633	RHOBTB2 (ENSSSCG00000009638) #33	PEBP4 (ENSSSCG00000009631) #34	EGR3 (ENSSSCG00000009630) #35	ENSSSCG00000061246	BIN3 (ENSSSCG00000009629) #36	CCAR2 (ENSSSCG00000009628) #37	C8orf58 (ENSSSCG00000009627)	PDLIM2 (ENSSSCG00000009625)
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.f	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.f	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Cetacea	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.f	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Odontoceti	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Sperm whale	MODERN SPECIES	20	PPP2R2A (ENSPCTG00005001540) #9	EBF2 (ENSPCTG00005001486) #10	ENSPCTG00005001468	CDCA2 (ENSPCTG00005001413) #11	KCTD9 (ENSPCTG00005001337) #12	GNRH1 (ENSPCTG00005001298) #13	DOCK5 (ENSPCTG00005001083) #14	NEFL (ENSPCTG00005001011) #16	NEFM (ENSPCTG00005000983)	ENSPCTG00005000957	ADAM7 (ENSPCTG00005000905) #17	ADAMDEC1 (ENSPCTG00005000843) #18	ADAM28 (ENSPCTG00005000741) #19	STC1 (ENSPCTG00005000557) #20	NKX2-6 (ENSPCTG00005000444) #21	NKX3-1 (ENSPCTG00005015538) #22	ENSPCTG00005015478	SLC25A37 (ENSPCTG00005015433) #23	ENSPCTG00005015370	ENSPCTG00005015319	ENTPD4 (ENSPCTG00005015209) #28	LOXL2 (ENSPCTG00005015101) #29	BIN3 (ENSPCTG00005014854) #36	CCAR2 (ENSPCTG00005014790) #37	ENSPCTG00005014687 #33	ENSPCTG00005014672	PPP3CC (ENSPCTG00005014485)	SLC39A14 (ENSPCTG00005014396)	PIWIL2 (ENSPCTG00005013801)	POLR3D (ENSPCTG00005013730)	PHYHIP (ENSPCTG00005013651)
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Dolphin	MODERN SPECIES	4932															NKX2-6 (ENSTTRG00000012331) #21	ENSTTRG00000012332 #22
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Vaquita	MODERN SPECIES	17	ENSPSNG00000010536	EBF2 (ENSPSNG00000010256) #10	ENSPSNG00000010228	ENSPSNG00000010183	CDCA2 (ENSPSNG00000009875) #11	KCTD9 (ENSPSNG00000009803) #12	GNRH1 (ENSPSNG00000004028) #13	ENSPSNG00000003996	ENSPSNG00000003965	NEFL (ENSPSNG00000003946) #16	ENSPSNG00000003914 #15	ADAMDEC1 (ENSPSNG00000003873) #18	ADAM28 (ENSPSNG00000003790) #19	STC1 (ENSPSNG00000003726) #20	NKX2-6 (ENSPSNG00000003713) #21	NKX3-1 (ENSPSNG00000003693) #22	ENSPSNG00000003682	SLC25A37 (ENSPSNG00000003670) #23	ENTPD4 (ENSPSNG00000003639) #28	LOXL2 (ENSPSNG00000003593) #29	R3HCC1 (ENSPSNG00000003548) #30	CHMP7 (ENSPSNG00000003508) #31	ENSPSNG00000003483	ENSPSNG00000003447	ENSPSNG00000003423	RHOBTB2 (ENSPSNG00000003361) #33	PEBP4 (ENSPSNG00000003231) #34	EGR3 (ENSPSNG00000003185) #35	BIN3 (ENSPSNG00000003145) #36	CCAR2 (ENSPSNG00000003064) #37	C8orf58 (ENSPSNG00000003015)
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01010000228881	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.e.a	ENSGT00940000162957.e.b	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418
Beluga whale	MODERN SPECIES	4	BNIP3L (ENSDLEG00000001250) #8	PPP2R2A (ENSDLEG00000001272) #9	ENSDLEG00000001289	EBF2 (ENSDLEG00000001316) #10	ENSDLEG00000001380	CDCA2 (ENSDLEG00000001385) #11	KCTD9 (ENSDLEG00000001415) #12	GNRH1 (ENSDLEG00000001435) #13	DOCK5 (ENSDLEG00000002343) #14	ENSDLEG00000006462	NEFL (ENSDLEG00000006467) #16	NEFM (ENSDLEG00000006476)	ADAM28 (ENSDLEG00000006489) #19	STC1 (ENSDLEG00000006517) #20	ENSDLEG00000006522 #21	NKX3-1 (ENSDLEG00000006531) #22	SLC25A37 (ENSDLEG00000006540) #23	ENSDLEG00000006543	ENTPD4 (ENSDLEG00000006555) #28	LOXL2 (ENSDLEG00000006576) #29	R3HCC1 (ENSDLEG00000006591) #30	CHMP7 (ENSDLEG00000006605) #31	ENSDLEG00000006614	ENSDLEG00000006626	ZNF484 (ENSDLEG00000006635)	ENSDLEG00000006641	IARS (ENSDLEG00000006757)	NOL8 (ENSDLEG00000007445)	CENPP (ENSDLEG00000007526)	OGN (ENSDLEG00000007549)	OMD (ENSDLEG00000007553)
Blue whale	MODERN SPECIES	17	ENSBMSG00010001374 #8	PPP2R2A (ENSBMSG00010001403) #9	EBF2 (ENSBMSG00010001470) #10	CDCA2 (ENSBMSG00010001504) #11	KCTD9 (ENSBMSG00010001525) #12	GNRH1 (ENSBMSG00010001589) #13	DOCK5 (ENSBMSG00010001626) #14	NEFL (ENSBMSG00010001677) #16	NEFM (ENSBMSG00010001692)	ENSBMSG00010001706	ENSBMSG00010001750 #17	ADAMDEC1 (ENSBMSG00010001768) #18	ENSBMSG00010001817 #19	STC1 (ENSBMSG00010001852) #20	NKX2-6 (ENSBMSG00010001859) #21	NKX3-1 (ENSBMSG00010001867) #22	SLC25A37 (ENSBMSG00010001881) #23	ENSBMSG00010001888	ENSBMSG00010001897	ENTPD4 (ENSBMSG00010001918) #28	LOXL2 (ENSBMSG00010001934) #29	ENSBMSG00010001963 #30	CHMP7 (ENSBMSG00010001987) #31	ENSBMSG00010002015	RHOBTB2 (ENSBMSG00010002063) #33	PEBP4 (ENSBMSG00010002119) #34	EGR3 (ENSBMSG00010002174) #35	BIN3 (ENSBMSG00010002206) #36	CCAR2 (ENSBMSG00010002236) #37	C8orf58 (ENSBMSG00010002259)	PDLIM2 (ENSBMSG00010002288)
Pecora	ANCESTRAL SPECIES	36	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00960000190195
Yarkand deer	MODERN SPECIES	7	ENSCHYG00000026854 #8	ENSCHYG00000026841 #9	EBF2 (ENSCHYG00000026813) #10	CDCA2 (ENSCHYG00000026788) #11	KCTD9 (ENSCHYG00000026770) #12	GNRH1 (ENSCHYG00000026755) #13	DOCK5 (ENSCHYG00000026683) #14	NEFL (ENSCHYG00000026647) #16	NEFM (ENSCHYG00000026636)	ADAM7 (ENSCHYG00000026508) #17	ADAMDEC1 (ENSCHYG00000026439) #18	ADAM28 (ENSCHYG00000025837) #19	ENSCHYG00000025762	STC1 (ENSCHYG00000025743) #20	NKX2-6 (ENSCHYG00000025734) #21	NKX3-1 (ENSCHYG00000025709) #22	SLC25A37 (ENSCHYG00000025677) #23	ENTPD4 (ENSCHYG00000025626) #28	LOXL2 (ENSCHYG00000025533) #29	R3HCC1 (ENSCHYG00000025446) #30	CHMP7 (ENSCHYG00000025352) #31	ENSCHYG00000025211	RHOBTB2 (ENSCHYG00000025115) #33	PEBP4 (ENSCHYG00000025076) #34	EGR3 (ENSCHYG00000025046) #35	BIN3 (ENSCHYG00000024970) #36	CCAR2 (ENSCHYG00000024837) #37	C8orf58 (ENSCHYG00000024797)	PDLIM2 (ENSCHYG00000024701)	SORBS3 (ENSCHYG00000024528)	PPP3CC (ENSCHYG00000023801)
Percora_a	ANCESTRAL SPECIES	24	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00970000197193
Bovidae	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00970000197193
Caprinae	ANCESTRAL SPECIES	14	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860.n #31	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Goat	MODERN SPECIES	27	ENSCHIG00000024818 #8	PPP2R2A (ENSCHIG00000007473) #9	EBF2 (ENSCHIG00000023729) #10	CDCA2 (ENSCHIG00000018580) #11	KCTD9 (ENSCHIG00000015791) #12	GNRH1 (ENSCHIG00000016406) #13	DOCK5 (ENSCHIG00000001085) #14	NEFL (ENSCHIG00000011951) #16	NEFM (ENSCHIG00000019945)	ADAM7 (ENSCHIG00000015652) #17	ADAMDEC1 (ENSCHIG00000015701) #18	ADAM28 (ENSCHIG00000024308) #19	ENSCHIG00000012581	STC1 (ENSCHIG00000010708) #20	NKX2-6 (ENSCHIG00000023290) #21	NKX3-1 (ENSCHIG00000010463) #22	ENSCHIG00000009620	ENSCHIG00000010457	SLC25A37 (ENSCHIG00000009638) #23	ENTPD4 (ENSCHIG00000017608) #28	LOXL2 (ENSCHIG00000015358) #29	R3HCC1 (ENSCHIG00000009107) #30	ENSCHIG00000024704 #31	ENSCHIG00000021504	ENSCHIG00000026442	ENSCHIG00000015870	RHOBTB2 (ENSCHIG00000010021) #33	PEBP4 (ENSCHIG00000018763) #34	EGR3 (ENSCHIG00000022674) #35	BIN3 (ENSCHIG00000020329) #36	CCAR2 (ENSCHIG00000007510) #37
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020013277	DPYSL2 (ENSOARG00020013413)	PNMA2 (ENSOARG00020013810) #7	ENSOARG00020013834 #8	PPP2R2A (ENSOARG00020013913) #9	EBF2 (ENSOARG00020014139) #10	CDCA2 (ENSOARG00020014388) #11	KCTD9 (ENSOARG00020014450) #12	DOCK5 (ENSOARG00020014672) #14	GNRH1 (ENSOARG00020017575) #13	NEFL (ENSOARG00020017673) #16	NEFM (ENSOARG00020017740)	ADAM7 (ENSOARG00020017810) #17	STC1 (ENSOARG00020019387) #20	NKX2-6 (ENSOARG00020019459) #21	NKX3-1 (ENSOARG00020019488) #22	SLC25A37 (ENSOARG00020019551) #23	ENTPD4 (ENSOARG00020019615) #28	ENSOARG00020019697 #31	ENSOARG00020019730	RHOBTB2 (ENSOARG00020019759) #33	PEBP4 (ENSOARG00020019900) #34	EGR3 (ENSOARG00020019990) #35	BIN3 (ENSOARG00020020084) #36	CCAR2 (ENSOARG00020020234) #37	C8orf58 (ENSOARG00020020420)	PDLIM2 (ENSOARG00020020511)	SORBS3 (ENSOARG00020020583)	PPP3CC (ENSOARG00020020737)	ENSOARG00020020965	SLC39A14 (ENSOARG00020020996)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00970000197193
Bos	ANCESTRAL SPECIES	10	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162635.mb.b.a	ENSGT00940000158918.i.b #33	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b
Bos_b	ANCESTRAL SPECIES	3	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00950000183031.B.e.b.a.a.a	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558	ENSGT00970000197193
Cow	MODERN SPECIES	27	EBF2 (ENSBTAG00000040390) #10	CDCA2 (ENSBTAG00000002756) #11	KCTD9 (ENSBTAG00000012382) #12	GNRH1 (ENSBTAG00000000164) #13	DOCK5 (ENSBTAG00000015513) #14	NEFL (ENSBTAG00000021949) #16	NEFM (ENSBTAG00000039530) #15	ADAM7 (ENSBTAG00000039171) #17	ADAMDEC1 (ENSBTAG00000001125) #18	ADAM28 (ENSBTAG00000037929) #19	ENSBTAG00000038064	ENSBTAG00000048755	STC1 (ENSBTAG00000001687) #20	ENSBTAG00000051369	NKX2-6 (ENSBTAG00000014008) #21	NKX3-1 (ENSBTAG00000001221) #22	SLC25A37 (ENSBTAG00000019099) #23	ENTPD4 (ENSBTAG00000006768) #28	LOXL2 (ENSBTAG00000006214) #29	R3HCC1 (ENSBTAG00000025830) #30	CHMP7 (ENSBTAG00000013528) #31	RHOBTB2 (ENSBTAG00000035958) #33	ENSBTAG00000050001	PEBP4 (ENSBTAG00000015416) #34	EGR3 (ENSBTAG00000019293) #35	BIN3 (ENSBTAG00000005470) #36	CCAR2 (ENSBTAG00000005469) #37	C8H8orf58 (ENSBTAG00000005466)	PDLIM2 (ENSBTAG00000007369)	ENSBTAG00000054318	SORBS3 (ENSBTAG00000014401)
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005023958	PPP2R2A (ENSBIXG00005024066) #9	EBF2 (ENSBIXG00005024188) #10	CDCA2 (ENSBIXG00005024231) #11	KCTD9 (ENSBIXG00005004143) #12	GNRH1 (ENSBIXG00005024264) #13	DOCK5 (ENSBIXG00005024516) #14	NEFL (ENSBIXG00005024596) #16	NEFM (ENSBIXG00005002572)	ADAM7 (ENSBIXG00005024699) #17	ENSBIXG00005025151 #19	ENSBIXG00005025234	ENSBIXG00005004295	STC1 (ENSBIXG00005025303) #20	NKX2-6 (ENSBIXG00005025314) #21	NKX3-1 (ENSBIXG00005025337) #22	SLC25A37 (ENSBIXG00005025367) #23	LOXL2 (ENSBIXG00005025479) #29	R3HCC1 (ENSBIXG00005025548) #30	CHMP7 (ENSBIXG00005025583) #31	ENSBIXG00005025600	ENSBIXG00005025709	RHOBTB2 (ENSBIXG00005026098) #33	ENSBIXG00005026205 #34	EGR3 (ENSBIXG00005026284) #35	BIN3 (ENSBIXG00005026346) #36	CCAR2 (ENSBIXG00005026417) #37	C8orf58 (ENSBIXG00005026447)	PDLIM2 (ENSBIXG00005026481)	ENSBIXG00005026487	SORBS3 (ENSBIXG00005007094)
Bos_a	ANCESTRAL SPECIES	20	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00990000214190	ENSGT00940000156208 #16	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162635.mb.b.a	ENSGT00940000158918.i.b #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558
Domestic yak	MODERN SPECIES	26	PPP2R2A (ENSBGRG00000000395) #9	EBF2 (ENSBGRG00000017109) #10	CDCA2 (ENSBGRG00000016906) #11	KCTD9 (ENSBGRG00000016782) #12	GNRH1 (ENSBGRG00000016731) #13	DOCK5 (ENSBGRG00000015972) #14	ENSBGRG00000015920	NEFL (ENSBGRG00000015850) #16	NEFM (ENSBGRG00000015744)	ENSBGRG00000015724	ADAM7 (ENSBGRG00000014923) #17	ENSBGRG00000014430 #18	ENSBGRG00000014380	STC1 (ENSBGRG00000014320) #20	NKX2-6 (ENSBGRG00000014251) #21	NKX3-1 (ENSBGRG00000014189) #22	SLC25A37 (ENSBGRG00000014111) #23	ENTPD4 (ENSBGRG00000013839) #28	LOXL2 (ENSBGRG00000013709) #29	R3HCC1 (ENSBGRG00000013568) #30	CHMP7 (ENSBGRG00000013440) #31	ENSBGRG00000013324	ENSBGRG00000013289 #33	PEBP4 (ENSBGRG00000013188) #34	EGR3 (ENSBGRG00000013085) #35	BIN3 (ENSBGRG00000012804) #36	CCAR2 (ENSBGRG00000012594) #37	C8orf58 (ENSBGRG00000012373)	PDLIM2 (ENSBGRG00000012168)	ENSBGRG00000012132	SORBS3 (ENSBGRG00000011774)
Wild yak	MODERN SPECIES	1056										ADAM7 (ENSBMUG00000005939) #17	ADAMDEC1 (ENSBMUG00000006004) #18	ADAM28 (ENSBMUG00000006021) #19	ENSBMUG00000006030	STC1 (ENSBMUG00000006043) #20	NKX2-6 (ENSBMUG00000006056) #21	NKX3-1 (ENSBMUG00000006065) #22	SLC25A37 (ENSBMUG00000006085) #23
Siberian musk deer	MODERN SPECIES	327	ENSMMSG00000005972 #9	EBF2 (ENSMMSG00000005908) #10	CDCA2 (ENSMMSG00000005842) #11	KCTD9 (ENSMMSG00000005761) #12	GNRH1 (ENSMMSG00000005726) #13	DOCK5 (ENSMMSG00000005425) #14	NEFL (ENSMMSG00000005342) #16	NEFM (ENSMMSG00000005289)	ADAM7 (ENSMMSG00000004688) #17	ADAMDEC1 (ENSMMSG00000004507) #18	ADAM28 (ENSMMSG00000004400) #19	ENSMMSG00000004334	ENSMMSG00000004320	STC1 (ENSMMSG00000013160) #20	NKX2-6 (ENSMMSG00000013148) #21	NKX3-1 (ENSMMSG00000013132) #22	SLC25A37 (ENSMMSG00000013114) #23	ENTPD4 (ENSMMSG00000013068) #28	LOXL2 (ENSMMSG00000013026) #29	R3HCC1 (ENSMMSG00000012970) #30	CHMP7 (ENSMMSG00000012943) #31	ENSMMSG00000012887	RHOBTB2 (ENSMMSG00000012820) #33	PEBP4 (ENSMMSG00000012800) #34	EGR3 (ENSMMSG00000012782) #35	BIN3 (ENSMMSG00000012720) #36	CCAR2 (ENSMMSG00000012636) #37	C8orf58 (ENSMMSG00000012599)	PDLIM2 (ENSMMSG00000012537)	SORBS3 (ENSMMSG00000012318)	ENSMMSG00000012271
Camelidae	ANCESTRAL SPECIES	47	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957.f	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418.r	ENSGT00940000160558	ENSGT00940000154115.c.a
Arabian camel	MODERN SPECIES	24	PNMA2 (ENSCDRG00005018959) #7	BNIP3L (ENSCDRG00005018890) #8	PPP2R2A (ENSCDRG00005018721) #9	ENSCDRG00005018693	EBF2 (ENSCDRG00005018634) #10	CDCA2 (ENSCDRG00005018503) #11	KCTD9 (ENSCDRG00005018455) #12	GNRH1 (ENSCDRG00005018431) #13	DOCK5 (ENSCDRG00005018165) #14	NEFL (ENSCDRG00005018138) #16	ENSCDRG00005018075 #15	ADAM7 (ENSCDRG00005017257) #17	ADAM28 (ENSCDRG00005016471) #19	STC1 (ENSCDRG00005016415) #20	ENSCDRG00005016389 #21	NKX3-1 (ENSCDRG00005016364) #22	SLC25A37 (ENSCDRG00005016317) #23	ENTPD4 (ENSCDRG00005016214) #28	LOXL2 (ENSCDRG00005016177) #29	R3HCC1 (ENSCDRG00005016059) #30	ENSCDRG00005016025	CHMP7 (ENSCDRG00005015938) #31	ENSCDRG00005015918	ENSCDRG00005015904	ENSCDRG00005015882	ENSCDRG00005015821	RHOBTB2 (ENSCDRG00005015666) #33	PEBP4 (ENSCDRG00005015556) #34	EGR3 (ENSCDRG00005015507) #35	BIN3 (ENSCDRG00005015398) #36	CCAR2 (ENSCDRG00005015276) #37
Alpaca	MODERN SPECIES	2636																NKX3-1 (ENSVPAG00000004503) #22	SLC25A37 (ENSVPAG00000004501) #23	ENSVPAG00000004500 #28
Atlantogenata	ANCESTRAL SPECIES	23	ENSGT01030000234522.C.b.e.a.a.b #7	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Xenarthra	ANCESTRAL SPECIES	695											ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23
Sloth	MODERN SPECIES	10205																NKX3-1 (ENSCHOG00000011132) #22
Armadillo	MODERN SPECIES	1655										ENSDNOG00000034104	ADAM7 (ENSDNOG00000004471) #17	ADAMDEC1 (ENSDNOG00000012585) #18	ADAM28 (ENSDNOG00000012554) #19	STC1 (ENSDNOG00000047812) #20	NKX2-6 (ENSDNOG00000041367) #21	NKX3-1 (ENSDNOG00000044451) #22	SLC25A37 (ENSDNOG00000036834) #23
Afrotheria	ANCESTRAL SPECIES	19	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Afrotheria_a	ANCESTRAL SPECIES	18	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000161406 #17	ENSGT00940000156716 #19	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00720000108860 #31	ENSGT00940000162957	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Elephant	MODERN SPECIES	225	BNIP3L (ENSLAFG00000018106) #8	PPP2R2A (ENSLAFG00000021762) #9	EBF2 (ENSLAFG00000022465) #10	CDCA2 (ENSLAFG00000003532) #11	KCTD9 (ENSLAFG00000003529) #12	GNRH1 (ENSLAFG00000003526) #13	DOCK5 (ENSLAFG00000003516) #14	NEFL (ENSLAFG00000026910) #16	ENSLAFG00000006017 #15	ENSLAFG00000022323	ENSLAFG00000030752	ENSLAFG00000026486	ADAM7 (ENSLAFG00000000586) #17	ADAM28 (ENSLAFG00000005662) #19	STC1 (ENSLAFG00000005774) #20	NKX3-1 (ENSLAFG00000008941) #22	SLC25A37 (ENSLAFG00000026743) #23	ENTPD4 (ENSLAFG00000008176) #28	LOXL2 (ENSLAFG00000022743) #29	R3HCC1 (ENSLAFG00000016137) #30	CHMP7 (ENSLAFG00000006100) #31	ENSLAFG00000007250	RHOBTB2 (ENSLAFG00000007247) #33	PEBP4 (ENSLAFG00000005308) #34	EGR3 (ENSLAFG00000028225) #35	BIN3 (ENSLAFG00000018465) #36	CCAR2 (ENSLAFG00000018459) #37	C8orf58 (ENSLAFG00000018457)	PDLIM2 (ENSLAFG00000018454)	SORBS3 (ENSLAFG00000018449)	PPP3CC (ENSLAFG00000018447)
Hyrax	MODERN SPECIES	12117															NKX2-6 (ENSPCAG00000016625) #21	ENSPCAG00000016644 #22
Tenrec	MODERN SPECIES	10180																NKX3-1 (ENSETEG00000018790) #22
Marsupialia	ANCESTRAL SPECIES	26	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.a	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b	ENSGT00940000161863.a.b.b.a	ENSGT00940000153123.B
Opossum	MODERN SPECIES		BNIP3L (ENSMODG00000016685) #8	ENSMODG00000043642	PPP2R2A (ENSMODG00000016691) #9	EBF2 (ENSMODG00000016702) #10	ENSMODG00000016706 #11	KCTD9 (ENSMODG00000016711) #12	DOCK5 (ENSMODG00000016721) #14	NEFL (ENSMODG00000016731) #16	ENSMODG00000016740 #15	ENSMODG00000016755 #17	ADAMDEC1 (ENSMODG00000016762) #18	ADAM28 (ENSMODG00000016767) #19	ENSMODG00000042259	STC1 (ENSMODG00000016782) #20	ENSMODG00000016788	NKX3-1 (ENSMODG00000016789) #22	ENSMODG00000016791 #23	ENSMODG00000038949 #23	ENTPD4 (ENSMODG00000016799) #28	LOXL2 (ENSMODG00000016806) #29	ENSMODG00000016809 #30	ENSMODG00000016810	ENSMODG00000038901	ENSMODG00000016814	ENSMODG00000023035	ENSMODG00000016846	ENSMODG00000016852	ENSMODG00000016866	ENSMODG00000016898	ENSMODG00000016878	ENSMODG00000042189
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00940000154418.a.b	ENSGT00940000161406 #17	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b
Diprotodontia	ANCESTRAL SPECIES	35	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a #9	ENSGT00950000182859.A.a.a.b #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	34	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b #8	ENSGT00950000182864.a.b.a.g.a #9	ENSGT00950000182859.A.a.a.b.g #10	ENSGT00940000154352.A #11	ENSGT00940000154314 #12	ENSGT00390000008225 #13	ENSGT00940000157734 #14	ENSGT00940000156208 #16	ENSGT00940000161685.A.a #15	ENSGT00900000141143 #18	ENSGT00940000156716 #19	ENSGT00530000063970.c.b	ENSGT00390000005989.b #20	ENSGT00940000160930 #22	ENSGT00940000158607 #23	ENSGT01100000263540.B.d #28	ENSGT00940000155874 #29	ENSGT00530000063711.a #30	ENSGT00940000161592.i.b	ENSGT00940000153104.e.b.a.a.a.b	ENSGT00950000182932.A.a.b	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942	ENSGT00950000182932.A.a.a.a	ENSGT00950000182932.A.a.a.b
koala	MODERN SPECIES	88				ENSPCIG00000000815 #10	ENSPCIG00000001012	ENSPCIG00000001033 #11	KCTD9 (ENSPCIG00000001064) #12	DOCK5 (ENSPCIG00000001109) #14	NEFL (ENSPCIG00000027211) #16	ENSPCIG00000016966 #15	ADAMDEC1 (ENSPCIG00000016489) #18	ADAM28 (ENSPCIG00000011332) #19	ENSPCIG00000037234	STC1 (ENSPCIG00000015151) #20	ENSPCIG00000020778	NKX3-1 (ENSPCIG00000020776) #22	SLC25A37 (ENSPCIG00000035854) #23	ENTPD4 (ENSPCIG00000020770) #28	LOXL2 (ENSPCIG00000020766) #29	ENSPCIG00000022718 #30	ENSPCIG00000012977	ENSPCIG00000017687	ENSPCIG00000008474	ENSPCIG00000004217	ENSPCIG00000004209	ENSPCIG00000004202	ENSPCIG00000034175	ENSPCIG00000035733	ENSPCIG00000035968	ENSPCIG00000031966	ENSPCIG00000001932
Wallaby	MODERN SPECIES	7463																ENSMEUG00000003167 #22
Tasmanian devil	MODERN SPECIES	1	PPP2R2A (ENSSHAG00000025445) #9	EBF2 (ENSSHAG00000021589) #10	ENSSHAG00000014469 #11	KCTD9 (ENSSHAG00000001024) #12	GNRH1 (ENSSHAG00000029017) #13	DOCK5 (ENSSHAG00000002033) #14	ENSSHAG00000028159 #16	NEFM (ENSSHAG00000006728)	ENSSHAG00000011334 #17	ADAMDEC1 (ENSSHAG00000011993) #18	ADAM28 (ENSSHAG00000012316) #19	ENSSHAG00000025330	STC1 (ENSSHAG00000026997) #20	ENSSHAG00000025937	ENSSHAG00000022384	NKX3-1 (ENSSHAG00000015475) #22	SLC25A37 (ENSSHAG00000021392) #23	ENTPD4 (ENSSHAG00000031790) #28	LOXL2 (ENSSHAG00000016252) #29	ENSSHAG00000024893 #30	ENSSHAG00000026818	ENSSHAG00000027942	ENSSHAG00000027951	ENSSHAG00000002898	ENSSHAG00000003538	ENSSHAG00000028239	ENSSHAG00000003953	ENSSHAG00000029645	ENSSHAG00000032171	ENSSHAG00000003235	ENSSHAG00000002352