Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.f #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.f #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Pecora	ANCESTRAL SPECIES	36	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a	ENSGT00960000190195
Percora_a	ANCESTRAL SPECIES	24	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162635.mb.b #30	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00970000197193
Bovidae	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162635.mb.b #30	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00970000197193
Caprinae	ANCESTRAL SPECIES	14	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860.n #29	ENSGT00940000162635.mb.b #30	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00940000154115.c.a
Goat	MODERN SPECIES	27	ENSCHIG00000024818 #7	PPP2R2A (ENSCHIG00000007473) #8	EBF2 (ENSCHIG00000023729) #9	CDCA2 (ENSCHIG00000018580) #10	KCTD9 (ENSCHIG00000015791) #11	GNRH1 (ENSCHIG00000016406) #12	DOCK5 (ENSCHIG00000001085) #13	NEFL (ENSCHIG00000011951) #14	NEFM (ENSCHIG00000019945) #15	ADAM7 (ENSCHIG00000015652) #16	ADAMDEC1 (ENSCHIG00000015701) #17	ADAM28 (ENSCHIG00000024308) #18	ENSCHIG00000012581 #19	STC1 (ENSCHIG00000010708) #20	NKX2-6 (ENSCHIG00000023290) #21	NKX3-1 (ENSCHIG00000010463) #22	ENSCHIG00000009620 #23	ENSCHIG00000010457 #24	SLC25A37 (ENSCHIG00000009638) #25	ENTPD4 (ENSCHIG00000017608) #26	LOXL2 (ENSCHIG00000015358) #27	R3HCC1 (ENSCHIG00000009107) #28	ENSCHIG00000024704 #29	ENSCHIG00000021504 #30	ENSCHIG00000026442 #31	ENSCHIG00000015870 #32	RHOBTB2 (ENSCHIG00000010021) #33	PEBP4 (ENSCHIG00000018763) #34	EGR3 (ENSCHIG00000022674) #35	BIN3 (ENSCHIG00000020329) #36	CCAR2 (ENSCHIG00000007510) #37
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020013277	DPYSL2 (ENSOARG00020013413)	PNMA2 (ENSOARG00020013810)	ENSOARG00020013834 #7	PPP2R2A (ENSOARG00020013913) #8	EBF2 (ENSOARG00020014139) #9	CDCA2 (ENSOARG00020014388) #10	KCTD9 (ENSOARG00020014450) #11	DOCK5 (ENSOARG00020014672) #13	GNRH1 (ENSOARG00020017575) #12	NEFL (ENSOARG00020017673) #14	NEFM (ENSOARG00020017740) #15	ADAM7 (ENSOARG00020017810) #16	STC1 (ENSOARG00020019387) #20	NKX2-6 (ENSOARG00020019459) #21	NKX3-1 (ENSOARG00020019488) #22	SLC25A37 (ENSOARG00020019551) #25	ENTPD4 (ENSOARG00020019615) #26	ENSOARG00020019697 ##29	ENSOARG00020019730 #30	RHOBTB2 (ENSOARG00020019759) #33	PEBP4 (ENSOARG00020019900) #34	EGR3 (ENSOARG00020019990) #35	BIN3 (ENSOARG00020020084) #36	CCAR2 (ENSOARG00020020234) #37	C8orf58 (ENSOARG00020020420)	PDLIM2 (ENSOARG00020020511)	SORBS3 (ENSOARG00020020583)	PPP3CC (ENSOARG00020020737)	ENSOARG00020020965	SLC39A14 (ENSOARG00020020996)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162635.mb.b #30	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558	ENSGT00970000197193
Bos	ANCESTRAL SPECIES	10	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162635.mb.b.a #30	ENSGT00940000158918.i.b ##33	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b
Bos_b	ANCESTRAL SPECIES	3	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00950000183031.B.e.b.a.a.a	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000158918.j #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558	ENSGT00970000197193
Cow	MODERN SPECIES	27	EBF2 (ENSBTAG00000040390) #9	CDCA2 (ENSBTAG00000002756) #10	KCTD9 (ENSBTAG00000012382) #11	GNRH1 (ENSBTAG00000000164) #12	DOCK5 (ENSBTAG00000015513) #13	NEFL (ENSBTAG00000021949) #14	NEFM (ENSBTAG00000039530)	ADAM7 (ENSBTAG00000039171) #16	ADAMDEC1 (ENSBTAG00000001125) #17	ADAM28 (ENSBTAG00000037929) #18	ENSBTAG00000038064	ENSBTAG00000048755	STC1 (ENSBTAG00000001687) #20	ENSBTAG00000051369	NKX2-6 (ENSBTAG00000014008) #21	NKX3-1 (ENSBTAG00000001221) #22	SLC25A37 (ENSBTAG00000019099) #25	ENTPD4 (ENSBTAG00000006768) #26	LOXL2 (ENSBTAG00000006214) #27	R3HCC1 (ENSBTAG00000025830) #28	CHMP7 (ENSBTAG00000013528) #29	RHOBTB2 (ENSBTAG00000035958) #33	ENSBTAG00000050001	PEBP4 (ENSBTAG00000015416) #34	EGR3 (ENSBTAG00000019293) #35	BIN3 (ENSBTAG00000005470) #36	CCAR2 (ENSBTAG00000005469) #37	C8H8orf58 (ENSBTAG00000005466)	PDLIM2 (ENSBTAG00000007369)	ENSBTAG00000054318	SORBS3 (ENSBTAG00000014401)
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005023958	PPP2R2A (ENSBIXG00005024066) #8	EBF2 (ENSBIXG00005024188) #9	CDCA2 (ENSBIXG00005024231) #10	KCTD9 (ENSBIXG00005004143) #11	GNRH1 (ENSBIXG00005024264) #12	DOCK5 (ENSBIXG00005024516) #13	NEFL (ENSBIXG00005024596) #14	NEFM (ENSBIXG00005002572) #15	ADAM7 (ENSBIXG00005024699) #16	ENSBIXG00005025151 #18	ENSBIXG00005025234	ENSBIXG00005004295	STC1 (ENSBIXG00005025303) #20	NKX2-6 (ENSBIXG00005025314) #21	NKX3-1 (ENSBIXG00005025337) #22	SLC25A37 (ENSBIXG00005025367) #25	LOXL2 (ENSBIXG00005025479) #27	R3HCC1 (ENSBIXG00005025548) #28	CHMP7 (ENSBIXG00005025583) #29	ENSBIXG00005025600	ENSBIXG00005025709 #30	RHOBTB2 (ENSBIXG00005026098) #33	ENSBIXG00005026205 #34	EGR3 (ENSBIXG00005026284) #35	BIN3 (ENSBIXG00005026346) #36	CCAR2 (ENSBIXG00005026417) #37	C8orf58 (ENSBIXG00005026447)	PDLIM2 (ENSBIXG00005026481)	ENSBIXG00005026487	SORBS3 (ENSBIXG00005007094)
Bos_a	ANCESTRAL SPECIES	20	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190	ENSGT00940000156208 #14	ENSGT00940000154418.a.b #15	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00940000154172.`b	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162635.mb.b.a #30	ENSGT00940000158918.i.b ##33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558
Domestic yak	MODERN SPECIES	26	PPP2R2A (ENSBGRG00000000395) #8	EBF2 (ENSBGRG00000017109) #9	CDCA2 (ENSBGRG00000016906) #10	KCTD9 (ENSBGRG00000016782) #11	GNRH1 (ENSBGRG00000016731) #12	DOCK5 (ENSBGRG00000015972) #13	ENSBGRG00000015920	NEFL (ENSBGRG00000015850) #14	NEFM (ENSBGRG00000015744) #15	ENSBGRG00000015724	ADAM7 (ENSBGRG00000014923) #16	ENSBGRG00000014430 #17	ENSBGRG00000014380	STC1 (ENSBGRG00000014320) #20	NKX2-6 (ENSBGRG00000014251) #21	NKX3-1 (ENSBGRG00000014189) #22	SLC25A37 (ENSBGRG00000014111) #25	ENTPD4 (ENSBGRG00000013839) #26	LOXL2 (ENSBGRG00000013709) #27	R3HCC1 (ENSBGRG00000013568) #28	CHMP7 (ENSBGRG00000013440) #29	ENSBGRG00000013324 #30	ENSBGRG00000013289 ##33	PEBP4 (ENSBGRG00000013188) #34	EGR3 (ENSBGRG00000013085) #35	BIN3 (ENSBGRG00000012804) #36	CCAR2 (ENSBGRG00000012594) #37	C8orf58 (ENSBGRG00000012373)	PDLIM2 (ENSBGRG00000012168)	ENSBGRG00000012132	SORBS3 (ENSBGRG00000011774)
Wild yak	MODERN SPECIES	1056										ADAM7 (ENSBMUG00000005939) #16	ADAMDEC1 (ENSBMUG00000006004) #17	ADAM28 (ENSBMUG00000006021) #18	ENSBMUG00000006030	STC1 (ENSBMUG00000006043) #20	NKX2-6 (ENSBMUG00000006056) #21	NKX3-1 (ENSBMUG00000006065) #22	SLC25A37 (ENSBMUG00000006085) #25
Siberian musk deer	MODERN SPECIES	327	ENSMMSG00000005972 #8	EBF2 (ENSMMSG00000005908) #9	CDCA2 (ENSMMSG00000005842) #10	KCTD9 (ENSMMSG00000005761) #11	GNRH1 (ENSMMSG00000005726) #12	DOCK5 (ENSMMSG00000005425) #13	NEFL (ENSMMSG00000005342) #14	NEFM (ENSMMSG00000005289) #15	ADAM7 (ENSMMSG00000004688) #16	ADAMDEC1 (ENSMMSG00000004507) #17	ADAM28 (ENSMMSG00000004400) #18	ENSMMSG00000004334	ENSMMSG00000004320	STC1 (ENSMMSG00000013160) #20	NKX2-6 (ENSMMSG00000013148) #21	NKX3-1 (ENSMMSG00000013132) #22	SLC25A37 (ENSMMSG00000013114) #25	ENTPD4 (ENSMMSG00000013068) #26	LOXL2 (ENSMMSG00000013026) #27	R3HCC1 (ENSMMSG00000012970) #28	CHMP7 (ENSMMSG00000012943) #29	ENSMMSG00000012887 #30	RHOBTB2 (ENSMMSG00000012820) #33	PEBP4 (ENSMMSG00000012800) #34	EGR3 (ENSMMSG00000012782) #35	BIN3 (ENSMMSG00000012720) #36	CCAR2 (ENSMMSG00000012636) #37	C8orf58 (ENSMMSG00000012599)	PDLIM2 (ENSMMSG00000012537)	SORBS3 (ENSMMSG00000012318)	ENSMMSG00000012271
Yarkand deer	MODERN SPECIES	7	ENSCHYG00000026854 #7	ENSCHYG00000026841 #8	EBF2 (ENSCHYG00000026813) #9	CDCA2 (ENSCHYG00000026788) #10	KCTD9 (ENSCHYG00000026770) #11	GNRH1 (ENSCHYG00000026755) #12	DOCK5 (ENSCHYG00000026683) #13	NEFL (ENSCHYG00000026647) #14	NEFM (ENSCHYG00000026636) #15	ADAM7 (ENSCHYG00000026508) #16	ADAMDEC1 (ENSCHYG00000026439) #17	ADAM28 (ENSCHYG00000025837) #18	ENSCHYG00000025762	STC1 (ENSCHYG00000025743) #20	NKX2-6 (ENSCHYG00000025734) #21	NKX3-1 (ENSCHYG00000025709) #22	SLC25A37 (ENSCHYG00000025677) #25	ENTPD4 (ENSCHYG00000025626) #26	LOXL2 (ENSCHYG00000025533) #27	R3HCC1 (ENSCHYG00000025446) #28	CHMP7 (ENSCHYG00000025352) #29	ENSCHYG00000025211 #30	RHOBTB2 (ENSCHYG00000025115) #33	PEBP4 (ENSCHYG00000025076) #34	EGR3 (ENSCHYG00000025046) #35	BIN3 (ENSCHYG00000024970) #36	CCAR2 (ENSCHYG00000024837) #37	C8orf58 (ENSCHYG00000024797)	PDLIM2 (ENSCHYG00000024701)	SORBS3 (ENSCHYG00000024528)	PPP3CC (ENSCHYG00000023801)
Cetacea	ANCESTRAL SPECIES	9	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.f #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Odontoceti	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.e.b ##31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Sperm whale	MODERN SPECIES	20	PPP2R2A (ENSPCTG00005001540) #8	EBF2 (ENSPCTG00005001486) #9	ENSPCTG00005001468	CDCA2 (ENSPCTG00005001413) #10	KCTD9 (ENSPCTG00005001337) #11	GNRH1 (ENSPCTG00005001298) #12	DOCK5 (ENSPCTG00005001083) #13	NEFL (ENSPCTG00005001011) #14	NEFM (ENSPCTG00005000983) #15	ENSPCTG00005000957	ADAM7 (ENSPCTG00005000905) #16	ADAMDEC1 (ENSPCTG00005000843) #17	ADAM28 (ENSPCTG00005000741) #18	STC1 (ENSPCTG00005000557) #20	NKX2-6 (ENSPCTG00005000444) #21	NKX3-1 (ENSPCTG00005015538) #22	ENSPCTG00005015478	SLC25A37 (ENSPCTG00005015433) #25	ENSPCTG00005015370	ENSPCTG00005015319	ENTPD4 (ENSPCTG00005015209) #26	LOXL2 (ENSPCTG00005015101) #27	BIN3 (ENSPCTG00005014854) #36	CCAR2 (ENSPCTG00005014790) #37	ENSPCTG00005014687 #33	ENSPCTG00005014672 #31	PPP3CC (ENSPCTG00005014485)	SLC39A14 (ENSPCTG00005014396)	PIWIL2 (ENSPCTG00005013801)	POLR3D (ENSPCTG00005013730)	PHYHIP (ENSPCTG00005013651)
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.e.b ##31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Dolphin	MODERN SPECIES	4932															NKX2-6 (ENSTTRG00000012331) #21	ENSTTRG00000012332 #22
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.e.b ##31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418	ENSGT00940000160558
Vaquita	MODERN SPECIES	17	ENSPSNG00000010536	EBF2 (ENSPSNG00000010256) #9	ENSPSNG00000010228	ENSPSNG00000010183	CDCA2 (ENSPSNG00000009875) #10	KCTD9 (ENSPSNG00000009803) #11	GNRH1 (ENSPSNG00000004028) #12	ENSPSNG00000003996	ENSPSNG00000003965	NEFL (ENSPSNG00000003946) #14	ENSPSNG00000003914	ADAMDEC1 (ENSPSNG00000003873) #17	ADAM28 (ENSPSNG00000003790) #18	STC1 (ENSPSNG00000003726) #20	NKX2-6 (ENSPSNG00000003713) #21	NKX3-1 (ENSPSNG00000003693) #22	ENSPSNG00000003682	SLC25A37 (ENSPSNG00000003670) #25	ENTPD4 (ENSPSNG00000003639) #26	LOXL2 (ENSPSNG00000003593) #27	R3HCC1 (ENSPSNG00000003548) #28	CHMP7 (ENSPSNG00000003508) #29	ENSPSNG00000003483 ##31	ENSPSNG00000003447 ##31	ENSPSNG00000003423	RHOBTB2 (ENSPSNG00000003361) #33	PEBP4 (ENSPSNG00000003231) #34	EGR3 (ENSPSNG00000003185) #35	BIN3 (ENSPSNG00000003145) #36	CCAR2 (ENSPSNG00000003064) #37	C8orf58 (ENSPSNG00000003015)
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000161406 #16	ENSGT00900000141143 #17	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01010000228881	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.e.a ##31	ENSGT00940000162957.e.b ##31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418
Beluga whale	MODERN SPECIES	4	BNIP3L (ENSDLEG00000001250) #7	PPP2R2A (ENSDLEG00000001272) #8	ENSDLEG00000001289	EBF2 (ENSDLEG00000001316) #9	ENSDLEG00000001380	CDCA2 (ENSDLEG00000001385) #10	KCTD9 (ENSDLEG00000001415) #11	GNRH1 (ENSDLEG00000001435) #12	DOCK5 (ENSDLEG00000002343) #13	ENSDLEG00000006462	NEFL (ENSDLEG00000006467) #14	NEFM (ENSDLEG00000006476) #15	ADAM28 (ENSDLEG00000006489) #18	STC1 (ENSDLEG00000006517) #20	ENSDLEG00000006522 #21	NKX3-1 (ENSDLEG00000006531) #22	SLC25A37 (ENSDLEG00000006540) #25	ENSDLEG00000006543	ENTPD4 (ENSDLEG00000006555) #26	LOXL2 (ENSDLEG00000006576) #27	R3HCC1 (ENSDLEG00000006591) #28	CHMP7 (ENSDLEG00000006605) #29	ENSDLEG00000006614 ##31	ENSDLEG00000006626 ##31	ZNF484 (ENSDLEG00000006635)	ENSDLEG00000006641	IARS (ENSDLEG00000006757)	NOL8 (ENSDLEG00000007445)	CENPP (ENSDLEG00000007526)	OGN (ENSDLEG00000007549)	OMD (ENSDLEG00000007553)
Blue whale	MODERN SPECIES	17	ENSBMSG00010001374 #7	PPP2R2A (ENSBMSG00010001403) #8	EBF2 (ENSBMSG00010001470) #9	CDCA2 (ENSBMSG00010001504) #10	KCTD9 (ENSBMSG00010001525) #11	GNRH1 (ENSBMSG00010001589) #12	DOCK5 (ENSBMSG00010001626) #13	NEFL (ENSBMSG00010001677) #14	NEFM (ENSBMSG00010001692) #15	ENSBMSG00010001706	ENSBMSG00010001750 #16	ADAMDEC1 (ENSBMSG00010001768) #17	ENSBMSG00010001817 #18	STC1 (ENSBMSG00010001852) #20	NKX2-6 (ENSBMSG00010001859) #21	NKX3-1 (ENSBMSG00010001867) #22	SLC25A37 (ENSBMSG00010001881) #25	ENSBMSG00010001888	ENSBMSG00010001897	ENTPD4 (ENSBMSG00010001918) #26	LOXL2 (ENSBMSG00010001934) #27	ENSBMSG00010001963 #28	CHMP7 (ENSBMSG00010001987) #29	ENSBMSG00010002015 ##31	RHOBTB2 (ENSBMSG00010002063) #33	PEBP4 (ENSBMSG00010002119) #34	EGR3 (ENSBMSG00010002174) #35	BIN3 (ENSBMSG00010002206) #36	CCAR2 (ENSBMSG00010002236) #37	C8orf58 (ENSBMSG00010002259)	PDLIM2 (ENSBMSG00010002288)
Camelidae	ANCESTRAL SPECIES	47	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #7	ENSGT00950000182864.a.b.a #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #14	ENSGT00940000161685.A.a	ENSGT00940000156716 #18	ENSGT00390000005989.b #20	ENSGT00940000162737 #21	ENSGT00940000160930 #22	ENSGT00940000158607 #25	ENSGT01100000263540.B.d #26	ENSGT00940000155874 #27	ENSGT00530000063711.a #28	ENSGT00720000108860 #29	ENSGT00940000162957.f #31	ENSGT00940000158918 #33	ENSGT00940000162387 #34	ENSGT00940000160355 #35	ENSGT00950000182882.B #36	ENSGT00530000063672.b #37	ENSGT00390000000531	ENSGT00940000160418.r	ENSGT00940000160558	ENSGT00940000154115.c.a
Arabian camel	MODERN SPECIES	24	PNMA2 (ENSCDRG00005018959)	BNIP3L (ENSCDRG00005018890) #7	PPP2R2A (ENSCDRG00005018721) #8	ENSCDRG00005018693	EBF2 (ENSCDRG00005018634) #9	CDCA2 (ENSCDRG00005018503) #10	KCTD9 (ENSCDRG00005018455) #11	GNRH1 (ENSCDRG00005018431) #12	DOCK5 (ENSCDRG00005018165) #13	NEFL (ENSCDRG00005018138) #14	ENSCDRG00005018075	ADAM7 (ENSCDRG00005017257) #16	ADAM28 (ENSCDRG00005016471) #18	STC1 (ENSCDRG00005016415) #20	ENSCDRG00005016389 #21	NKX3-1 (ENSCDRG00005016364) #22	SLC25A37 (ENSCDRG00005016317) #25	ENTPD4 (ENSCDRG00005016214) #26	LOXL2 (ENSCDRG00005016177) #27	R3HCC1 (ENSCDRG00005016059) #28	ENSCDRG00005016025	CHMP7 (ENSCDRG00005015938) #29	ENSCDRG00005015918	ENSCDRG00005015904 #31	ENSCDRG00005015882 ##31	ENSCDRG00005015821 #31	RHOBTB2 (ENSCDRG00005015666) #33	PEBP4 (ENSCDRG00005015556) #34	EGR3 (ENSCDRG00005015507) #35	BIN3 (ENSCDRG00005015398) #36	CCAR2 (ENSCDRG00005015276) #37
Alpaca	MODERN SPECIES	2636																NKX3-1 (ENSVPAG00000004503) #22	SLC25A37 (ENSVPAG00000004501) #25	ENSVPAG00000004500 #26