Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.b #22 Gnathostomata ANCESTRAL SPECIES 923 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 Euteleostomi ANCESTRAL SPECIES 475 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 Sarcopterygii ANCESTRAL SPECIES 57 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 Tetrapoda ANCESTRAL SPECIES 83 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 Amniota ANCESTRAL SPECIES 29 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Mammalia ANCESTRAL SPECIES 29 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Theria ANCESTRAL SPECIES 15 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B ENSGT01040000240383.b.a.b ENSGT00940000163057 Eutheria ANCESTRAL SPECIES 3 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a ENSGT01040000240383.b.a.b Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Primates ANCESTRAL SPECIES ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Haplorrhini ANCESTRAL SPECIES ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 Simiiformes ANCESTRAL SPECIES ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D Catarrhini ANCESTRAL SPECIES 1 ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT01000000216167 Cercopithecidae ANCESTRAL SPECIES ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT01000000216167 ENSGT00390000018560.b Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b ENSGT00940000161189 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000155838 #8 ENSGT00390000010239.i.a #9 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00390000018696.m.b ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b Cercopithecinae_b ANCESTRAL SPECIES 21 ENSGT00940000155838 #8 ENSGT00390000010239.i.a #9 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00390000018696.m.b ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00950000183206.b.c.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b Cercopithecinae_d ANCESTRAL SPECIES 30 ENSGT00940000155838 #8 ENSGT00390000010239.i.a #9 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00390000018696.m.b ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b Drill DUPLICATION Drill MODERN SPECIES 1442 CBL (ENSMLEG00000036210) #7 MCAM (ENSMLEG00000026928) #8 ENSMLEG00000032552 #9 RNF26 (ENSMLEG00000007321) #10 MFRP (ENSMLEG00000038923) #11 USP2 (ENSMLEG00000038440) #12 THY1 (ENSMLEG00000040451) #13 NECTIN1 (ENSMLEG00000044133) #14 TRIM29 (ENSMLEG00000036027) #15 OAF (ENSMLEG00000036891) #16 POU2F3 (ENSMLEG00000028245) #17 TLCD5 (ENSMLEG00000029963) #18 ARHGEF12 (ENSMLEG00000026495) #19 GRIK4 (ENSMLEG00000025698) #20 TBCEL (ENSMLEG00000025791) #21 TECTA (ENSMLEG00000028945) #22 SC5D (ENSMLEG00000036490) #23 SORL1 (ENSMLEG00000039313) #24 ENSMLEG00000022433 #25 UBASH3B (ENSMLEG00000041837) #26 CRTAM (ENSMLEG00000028583) #27 JHY (ENSMLEG00000032823) #28 BSX (ENSMLEG00000036709) #29 ENSMLEG00000039190 #30 ENSMLEG00000031834 #31 CLMP (ENSMLEG00000022965) #32 ENSMLEG00000029252 #33 ENSMLEG00000043025 #34 Drill MODERN SPECIES 126 SPTBN4 (ENSMLEG00000044466) BLVRB (ENSMLEG00000029880) SERTAD3 (ENSMLEG00000019016) SERTAD1 (ENSMLEG00000018674) PRX (ENSMLEG00000036387) HIPK4 (ENSMLEG00000016332) PLD3 (ENSMLEG00000005847) C19orf47 (ENSMLEG00000030565) AKT2 (ENSMLEG00000035004) CCNP (ENSMLEG00000037810) ENSMLEG00000043081 ZNF780A (ENSMLEG00000024032) ZNF780B (ENSMLEG00000037185) ZNF546 (ENSMLEG00000039582) PSMC4 (ENSMLEG00000038009) ENSMLEG00000044328 ##22 FBL (ENSMLEG00000042975) DYRK1B (ENSMLEG00000030415) LEUTX (ENSMLEG00000041306) ENSMLEG00000018416 Sooty mangabey MODERN SPECIES 274 ENSCATG00000018518 PRX (ENSCATG00000039380) HIPK4 (ENSCATG00000037803) PLD3 (ENSCATG00000033108) C19orf47 (ENSCATG00000033719) ENSCATG00000026009 AKT2 (ENSCATG00000039044) CCNP (ENSCATG00000021835) TTC9B (ENSCATG00000021179) MAP3K10 (ENSCATG00000041412) ZNF780A (ENSCATG00000035324) ZNF780B (ENSCATG00000031754) ENSCATG00000031130 ZNF546 (ENSCATG00000043166) PSMC4 (ENSCATG00000042484) ENSCATG00000040702 #22 ENSCATG00000033742 ##22 FBL (ENSCATG00000039255) DYRK1B (ENSCATG00000038454) LEUTX (ENSCATG00000041700) ENSCATG00000040487 Olive baboon MODERN SPECIES 3 MCAM (ENSPANG00000011051) #8 RNF26 (ENSPANG00000021114) #10 C1QTNF5 (ENSPANG00000003692) MFRP (ENSPANG00000022408) #11 USP2 (ENSPANG00000014344) #12 THY1 (ENSPANG00000014882) #13 ENSPANG00000049873 NECTIN1 (ENSPANG00000003691) #14 TRIM29 (ENSPANG00000007948) #15 OAF (ENSPANG00000050743) #16 POU2F3 (ENSPANG00000005039) #17 TLCD5 (ENSPANG00000019802) #18 ARHGEF12 (ENSPANG00000014881) #19 GRIK4 (ENSPANG00000003099) #20 TBCEL (ENSPANG00000032315) #21 TECTA (ENSPANG00000000279) #22 SC5D (ENSPANG00000019258) #23 SORL1 (ENSPANG00000002674) #24 ENSPANG00000014769 UBASH3B (ENSPANG00000023957) #26 CRTAM (ENSPANG00000043725) #27 JHY (ENSPANG00000015650) #28 BSX (ENSPANG00000019257) #29 ENSPANG00000039836 ENSPANG00000042004 ##30 ENSPANG00000011889 ##31 CLMP (ENSPANG00000019256) #32 SCN3B (ENSPANG00000019800) GRAMD1B (ENSPANG00000018864) #34 ZNF202 (ENSPANG00000004921) OR6X1 (ENSPANG00000051029) Macaca ANCESTRAL SPECIES 2 ENSGT00940000155838 #8 ENSGT00390000010239.i.a #9 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00390000018696.m.b ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.b.b.b.a.b.a.a ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00390000018696.m.b ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 Rhesus MODERN SPECIES 5 CBL (ENSMMUG00000004761) #7 MCAM (ENSMMUG00000004764) #8 RNF26 (ENSMMUG00000041425) #10 C1QTNF5 (ENSMMUG00000053088) MFRP (ENSMMUG00000005485) #11 ENSMMUG00000064575 USP2 (ENSMMUG00000008921) #12 THY1 (ENSMMUG00000008923) #13 NECTIN1 (ENSMMUG00000008274) #14 TRIM29 (ENSMMUG00000019111) #15 OAF (ENSMMUG00000012249) #16 POU2F3 (ENSMMUG00000012251) #17 TLCD5 (ENSMMUG00000012253) #18 ARHGEF12 (ENSMMUG00000012254) #19 GRIK4 (ENSMMUG00000022347) #20 TBCEL (ENSMMUG00000039397) #22 SC5D (ENSMMUG00000053625) #23 SORL1 (ENSMMUG00000014880) #24 ENSMMUG00000014883 UBASH3B (ENSMMUG00000002919) #26 CRTAM (ENSMMUG00000002922) #27 JHY (ENSMMUG00000015731) #28 BSX (ENSMMUG00000060529) #29 HSPA8 (ENSMMUG00000004696) #31 CLMP (ENSMMUG00000007798) #32 GRAMD1B (ENSMMUG00000015522) #34 ENSMMUG00000061604 SCN3B (ENSMMUG00000000343) ZNF202 (ENSMMUG00000056235) OR6X1 (ENSMMUG00000054171) OR6M1 (ENSMMUG00000057944) Crab-eating macaque MODERN SPECIES 5 THY1 (ENSMFAG00000041030) #13 MCAM (ENSMFAG00000041611) #8 RNF26 (ENSMFAG00000030008) #10 C1QTNF5 (ENSMFAG00000048016) MFRP (ENSMFAG00000011642) #11 ENSMFAG00000052476 USP2 (ENSMFAG00000038340) #12 NECTIN1 (ENSMFAG00000045996) #14 TRIM29 (ENSMFAG00000032457) #15 OAF (ENSMFAG00000032739) #16 POU2F3 (ENSMFAG00000041578) #17 TLCD5 (ENSMFAG00000062098) #18 ARHGEF12 (ENSMFAG00000001538) #19 GRIK4 (ENSMFAG00000036614) #20 TBCEL (ENSMFAG00000032553) #21 TECTA (ENSMFAG00000035833) #22 SC5D (ENSMFAG00000001405) #23 SORL1 (ENSMFAG00000031352) #24 ENSMFAG00000012859 UBASH3B (ENSMFAG00000032807) #26 CRTAM (ENSMFAG00000039012) #27 JHY (ENSMFAG00000036541) #28 BSX (ENSMFAG00000049055) #29 ENSMFAG00000038633 ##31 CLMP (ENSMFAG00000042143) #32 GRAMD1B (ENSMFAG00000023822) #34 SCN3B (ENSMFAG00000001774) ZNF202 (ENSMFAG00000002603) OR6X1 (ENSMFAG00000065461) OR6M1 (ENSMFAG00000052226) TMEM225 (ENSMFAG00000045976) Pig-tailed macaque MODERN SPECIES 537 MCAM (ENSMNEG00000043082) #8 ENSMNEG00000041171 #9 RNF26 (ENSMNEG00000016950) #10 C1QTNF5 (ENSMNEG00000027309) MFRP (ENSMNEG00000040703) #11 USP2 (ENSMNEG00000036119) #12 THY1 (ENSMNEG00000024435) #13 NECTIN1 (ENSMNEG00000040408) #14 TRIM29 (ENSMNEG00000041337) #15 OAF (ENSMNEG00000036407) #16 POU2F3 (ENSMNEG00000028559) #17 TLCD5 (ENSMNEG00000039176) #18 ARHGEF12 (ENSMNEG00000033616) #19 GRIK4 (ENSMNEG00000032182) #20 TBCEL (ENSMNEG00000035148) #21 TECTA (ENSMNEG00000040467) #22 SC5D (ENSMNEG00000028441) #23 SORL1 (ENSMNEG00000044804) #24 UBASH3B (ENSMNEG00000028610) #26 CRTAM (ENSMNEG00000024995) #27 JHY (ENSMNEG00000042234) #28 BSX (ENSMNEG00000040892) #29 ENSMNEG00000043029 #30 HSPA8 (ENSMNEG00000039117) #31 ENSMNEG00000044310 #33 CLMP (ENSMNEG00000036899) #32 GRAMD1B (ENSMNEG00000036267) #34 SCN3B (ENSMNEG00000032570) ZNF202 (ENSMNEG00000043058) TMEM225 (ENSMNEG00000037095) OR4D5 (ENSMNEG00000007628) Vervet Monkey MODERN SPECIES RNF26 (ENSCSAG00000000594) #10 C1QTNF5 (ENSCSAG00000002500) MFRP (ENSCSAG00000002497) #11 USP2 (ENSCSAG00000002490) #12 THY1 (ENSCSAG00000002488) #13 NECTIN1 (ENSCSAG00000002486) #14 TRIM29 (ENSCSAG00000002483) #15 OAF (ENSCSAG00000002480) #16 POU2F3 (ENSCSAG00000002476) #17 TLCD5 (ENSCSAG00000002472) #18 ARHGEF12 (ENSCSAG00000002470) #19 ENSCSAG00000000593 ENSCSAG00000002464 GRIK4 (ENSCSAG00000002460) #20 TBCEL (ENSCSAG00000002453) #21 TECTA (ENSCSAG00000002447) #22 SC5D (ENSCSAG00000002441) #23 SORL1 (ENSCSAG00000002437) #24 ENSCSAG00000000592 BLID (ENSCSAG00000002430) UBASH3B (ENSCSAG00000002428) #26 CRTAM (ENSCSAG00000002423) #27 JHY (ENSCSAG00000002416) #28 BSX (ENSCSAG00000002413) #29 ENSCSAG00000002411 ##31 CLMP (ENSCSAG00000002410) #32 GRAMD1B (ENSCSAG00000002406) #34 SCN3B (ENSCSAG00000002404) ZNF202 (ENSCSAG00000002403) OR6X1 (ENSCSAG00000000591) TMEM225 (ENSCSAG00000002400) Rhinopithecus ANCESTRAL SPECIES 77 ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00390000014520.j ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.b.d ##31 ENSGT00950000183206.b.c.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00390000011943.a.b.i.b ENSGT01000000216167 Black snub-nosed monkey MODERN SPECIES 2695 GRIK4 (ENSRBIG00000028153) #20 TBCEL (ENSRBIG00000027727) #21 TECTA (ENSRBIG00000037995) #22 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2238 SERTAD3 (ENSRROG00000010371) SERTAD1 (ENSRROG00000024643) PRX (ENSRROG00000030389) HIPK4 (ENSRROG00000003245) PLD3 (ENSRROG00000041287) C19orf47 (ENSRROG00000030785) AKT2 (ENSRROG00000043558) ENSRROG00000030325 CCNP (ENSRROG00000037151) TTC9B (ENSRROG00000033407) MAP3K10 (ENSRROG00000039515) ZNF780A (ENSRROG00000043418) ZNF780B (ENSRROG00000037216) ZNF546 (ENSRROG00000020484) PSMC4 (ENSRROG00000037105) ENSRROG00000045327 #22 ENSRROG00000034526 ##22 FBL (ENSRROG00000012374) DYRK1B (ENSRROG00000035989) LEUTX (ENSRROG00000039693) ENSRROG00000013132 LGALS14 (ENSRROG00000038984) ENSRROG00000038593 ENSRROG00000001014 LGALS16 (ENSRROG00000004551) EID2 (ENSRROG00000010427) ENSRROG00000032100 SELENOV (ENSRROG00000028526) DLL3 (ENSRROG00000036470) ENSRROG00000045435 SUPT5H (ENSRROG00000019625) Golden snub-nosed monkey MODERN SPECIES 3143 RNF26 (ENSRROG00000001057) #10 C1QTNF5 (ENSRROG00000018790) MFRP (ENSRROG00000040629) #11 USP2 (ENSRROG00000041516) #12 THY1 (ENSRROG00000034588) #13 NECTIN1 (ENSRROG00000045145) #14 TRIM29 (ENSRROG00000030222) #15 OAF (ENSRROG00000035538) #16 POU2F3 (ENSRROG00000045297) #17 TLCD5 (ENSRROG00000008707) #18 ARHGEF12 (ENSRROG00000019620) #19 ENSRROG00000043020 ENSRROG00000003857 GRIK4 (ENSRROG00000036204) #20 TBCEL (ENSRROG00000040596) #21 TECTA (ENSRROG00000014275) #22 SC5D (ENSRROG00000036199) #23 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000153339.a.a.a.a.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b Gibbon MODERN SPECIES 7 SERTAD3 (ENSNLEG00000036308) SERTAD1 (ENSNLEG00000014078) ENSNLEG00000014084 HIPK4 (ENSNLEG00000014093) PLD3 (ENSNLEG00000014094) C19orf47 (ENSNLEG00000029299) ENSNLEG00000014127 ENSNLEG00000031065 ENSNLEG00000014128 TTC9B (ENSNLEG00000014133) ENSNLEG00000014086 ZNF780A (ENSNLEG00000035503) ZNF780B (ENSNLEG00000014151) ENSNLEG00000030875 PSMC4 (ENSNLEG00000014152) ENSNLEG00000029102 #22 ENSNLEG00000033721 ##22 FBL (ENSNLEG00000014234) DYRK1B (ENSNLEG00000014276) LEUTX (ENSNLEG00000014279) ENSNLEG00000035525 EID2B (ENSNLEG00000036053) SELENOV (ENSNLEG00000014286) DLL3 (ENSNLEG00000014294) ENSNLEG00000014316 SUPT5H (ENSNLEG00000014365) ENSNLEG00000014388 PLEKHG2 (ENSNLEG00000014390) ZFP36 (ENSNLEG00000014418) MED29 (ENSNLEG00000014421) PAF1 (ENSNLEG00000014430) Hominidae ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000153339.a.a.a.a.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.b.d ##31 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b Orangutan MODERN SPECIES 2 MCAM (ENSPPYG00000003963) #8 RNF26 (ENSPPYG00000003964) #10 C1QTNF5 (ENSPPYG00000040174) MFRP (ENSPPYG00000003965) #11 USP2 (ENSPPYG00000003966) #12 THY1 (ENSPPYG00000031865) #13 NECTIN1 (ENSPPYG00000003969) #14 TRIM29 (ENSPPYG00000003970) #15 ENSPPYG00000038171 OAF (ENSPPYG00000003971) #16 POU2F3 (ENSPPYG00000003972) #17 TLCD5 (ENSPPYG00000030706) #18 ARHGEF12 (ENSPPYG00000003974) #19 GRIK4 (ENSPPYG00000003977) #20 TBCEL (ENSPPYG00000003978) #21 TECTA (ENSPPYG00000003979) #22 SC5D (ENSPPYG00000003980) #23 SORL1 (ENSPPYG00000003981) #24 UBASH3B (ENSPPYG00000003983) #26 CRTAM (ENSPPYG00000003984) #27 JHY (ENSPPYG00000003985) #28 BSX (ENSPPYG00000003986) #29 ENSPPYG00000032127 #30 HSPA8 (ENSPPYG00000003987) ##31 CLMP (ENSPPYG00000033296) #32 GRAMD1B (ENSPPYG00000004126) #34 SCN3B (ENSPPYG00000004127) ZNF202 (ENSPPYG00000003989) OR6X1 (ENSPPYG00000003990) OR6M1 (ENSPPYG00000032767) TMEM225 (ENSPPYG00000003991) Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000153339.a.a.a.a.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b ENSGT00940000161189 Gorilla MODERN SPECIES 2 ENSGGOG00000036543 CBL (ENSGGOG00000003804) #7 MCAM (ENSGGOG00000003810) #8 RNF26 (ENSGGOG00000010369) #10 MFRP (ENSGGOG00000034888) #11 USP2 (ENSGGOG00000005083) #12 THY1 (ENSGGOG00000011554) #13 ENSGGOG00000036343 TRIM29 (ENSGGOG00000001938) #15 OAF (ENSGGOG00000008711) #16 POU2F3 (ENSGGOG00000008715) #17 TLCD5 (ENSGGOG00000036905) #18 ARHGEF12 (ENSGGOG00000008723) #19 GRIK4 (ENSGGOG00000000351) #20 TBCEL (ENSGGOG00000024606) #21 TECTA (ENSGGOG00000010060) #22 ENSGGOG00000004905 #23 ENSGGOG00000021948 #23 SORL1 (ENSGGOG00000002552) #24 BLID (ENSGGOG00000002119) ENSGGOG00000023509 UBASH3B (ENSGGOG00000000599) #26 CRTAM (ENSGGOG00000009350) #27 JHY (ENSGGOG00000006104) #28 BSX (ENSGGOG00000006416) #29 ENSGGOG00000025359 #30 ENSGGOG00000008381 ##31 CLMP (ENSGGOG00000013181) #32 ENSGGOG00000041273 #33 GRAMD1B (ENSGGOG00000007671) #34 ENSGGOG00000022611 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000153339.a.a.a.a.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b ENSGT00940000161189 Human MODERN SPECIES 2 MCAM (ENSG00000076706) #8 RNF26 (ENSG00000173456) #10 C1QTNF5 (ENSG00000223953) MFRP (ENSG00000235718) #11 USP2 (ENSG00000036672) #12 THY1 (ENSG00000154096) #13 NECTIN1 (ENSG00000110400) #14 TRIM29 (ENSG00000137699) #15 OAF (ENSG00000184232) #16 POU2F3 (ENSG00000137709) #17 TLCD5 (ENSG00000181264) #18 ARHGEF12 (ENSG00000196914) #19 GRIK4 (ENSG00000149403) #20 TBCEL (ENSG00000154114) #21 TBCEL-TECTA (ENSG00000285509) TECTA (ENSG00000109927) #22 SC5D (ENSG00000109929) #23 SORL1 (ENSG00000137642) #24 BLID (ENSG00000259571) UBASH3B (ENSG00000154127) #26 CRTAM (ENSG00000109943) #27 JHY (ENSG00000109944) #28 BSX (ENSG00000188909) #29 HSPA8 (ENSG00000109971) #31 CLMP (ENSG00000166250) #32 GRAMD1B (ENSG00000023171) #34 SCN3B (ENSG00000166257) ZNF202 (ENSG00000166261) OR6X1 (ENSG00000221931) OR6M1 (ENSG00000196099) TMEM225 (ENSG00000204300) Pan ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000153339.a.a.a.a.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00550000075007.i.a #30 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT00530000063402.a.h.b ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D Bonobo MODERN SPECIES 2 MCAM (ENSPPAG00000038390) #8 RNF26 (ENSPPAG00000017505) #10 MFRP (ENSPPAG00000041896) #11 C1QTNF5 (ENSPPAG00000011910) USP2 (ENSPPAG00000027076) #12 THY1 (ENSPPAG00000030185) #13 ENSPPAG00000032373 NECTIN1 (ENSPPAG00000031563) #14 TRIM29 (ENSPPAG00000019409) #15 OAF (ENSPPAG00000034947) #16 POU2F3 (ENSPPAG00000036880) #17 TLCD5 (ENSPPAG00000023495) #18 ARHGEF12 (ENSPPAG00000034100) #19 GRIK4 (ENSPPAG00000029922) #20 TBCEL (ENSPPAG00000037457) #21 TECTA (ENSPPAG00000034978) #22 SC5D (ENSPPAG00000043959) #23 SORL1 (ENSPPAG00000027308) #24 UBASH3B (ENSPPAG00000031301) #26 CRTAM (ENSPPAG00000041032) #27 JHY (ENSPPAG00000029250) #28 BSX (ENSPPAG00000041447) #29 ENSPPAG00000032058 #30 HSPA8 (ENSPPAG00000041004) #31 CLMP (ENSPPAG00000029934) #32 ENSPPAG00000036661 #33 GRAMD1B (ENSPPAG00000035403) #34 ENSPPAG00000039955 SCN3B (ENSPPAG00000031999) ZNF202 (ENSPPAG00000040097) OR6X1 (ENSPPAG00000010567) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 10 SERTAD3 (ENSPTRG00000051915) SERTAD1 (ENSPTRG00000029014) PRX (ENSPTRG00000010996) HIPK4 (ENSPTRG00000010995) PLD3 (ENSPTRG00000010994) C19H19orf47 (ENSPTRG00000010993) AKT2 (ENSPTRG00000010992) CCNP (ENSPTRG00000010991) TTC9B (ENSPTRG00000023273) MAP3K10 (ENSPTRG00000010989) ZNF780A (ENSPTRG00000050602) ZNF780B (ENSPTRG00000010988) ENSPTRG00000046558 ZNF546 (ENSPTRG00000010987) PSMC4 (ENSPTRG00000010986) ENSPTRG00000049008 #22 FCGBP (ENSPTRG00000010984) ##22 FBL (ENSPTRG00000010982) DYRK1B (ENSPTRG00000010981) LEUTX (ENSPTRG00000033892) LGALS13 (ENSPTRG00000010979) LGALS16 (ENSPTRG00000041582) EID2 (ENSPTRG00000041631) EID2B (ENSPTRG00000010977) SELENOV (ENSPTRG00000023879) DLL3 (ENSPTRG00000010975) TIMM50 (ENSPTRG00000010973) SUPT5H (ENSPTRG00000010971) RPS16 (ENSPTRG00000010970) PLEKHG2 (ENSPTRG00000010969) ZFP36 (ENSPTRG00000010968) Chimpanzee MODERN SPECIES 2 CBL (ENSPTRG00000004378) #7 MCAM (ENSPTRG00000004379) #8 RNF26 (ENSPTRG00000004381) #10 MFRP (ENSPTRG00000024075) #11 USP2 (ENSPTRG00000004384) #12 THY1 (ENSPTRG00000004385) #13 ENSPTRG00000044210 NECTIN1 (ENSPTRG00000004387) #14 TRIM29 (ENSPTRG00000004388) #15 OAF (ENSPTRG00000004390) #16 POU2F3 (ENSPTRG00000004391) #17 TLCD5 (ENSPTRG00000004392) #18 ARHGEF12 (ENSPTRG00000004393) #19 GRIK4 (ENSPTRG00000004394) #20 TBCEL (ENSPTRG00000004395) #21 TECTA (ENSPTRG00000004396) #22 SC5D (ENSPTRG00000046128) #23 SORL1 (ENSPTRG00000004398) #24 UBASH3B (ENSPTRG00000004400) #26 CRTAM (ENSPTRG00000004401) #27 JHY (ENSPTRG00000004402) #28 BSX (ENSPTRG00000004403) #29 ENSPTRG00000049765 #30 HSPA8 (ENSPTRG00000004404) #31 CLMP (ENSPTRG00000004405) #32 ENSPTRG00000048153 #33 GRAMD1B (ENSPTRG00000004406) #34 ENSPTRG00000046013 SCN3B (ENSPTRG00000004408) ZNF202 (ENSPTRG00000004409) OR6X1 (ENSPTRG00000042253) Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000154517.e.a #33 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 527 CBL (ENSANAG00000029664) #7 MCAM (ENSANAG00000036872) #8 RNF26 (ENSANAG00000009708) #10 C1QTNF5 (ENSANAG00000022833) MFRP (ENSANAG00000021927) #11 USP2 (ENSANAG00000038057) #12 THY1 (ENSANAG00000034071) #13 NECTIN1 (ENSANAG00000037728) #14 TRIM29 (ENSANAG00000035721) #15 OAF (ENSANAG00000028659) #16 POU2F3 (ENSANAG00000037801) #17 TLCD5 (ENSANAG00000028920) #18 ARHGEF12 (ENSANAG00000035929) #19 GRIK4 (ENSANAG00000029340) #20 TBCEL (ENSANAG00000037781) #21 TECTA (ENSANAG00000021954) #22 SC5D (ENSANAG00000031781) #23 SORL1 (ENSANAG00000031276) #24 BLID (ENSANAG00000028884) ENSANAG00000035361 UBASH3B (ENSANAG00000020625) #26 CRTAM (ENSANAG00000035170) #27 JHY (ENSANAG00000032921) #28 BSX (ENSANAG00000027600) #29 ENSANAG00000034435 ##31 CLMP (ENSANAG00000036244) #32 ENSANAG00000028995 #33 GRAMD1B (ENSANAG00000019027) #34 ENSANAG00000032228 SCN3B (ENSANAG00000037873) ZNF202 (ENSANAG00000034002) Mas night monkey MODERN SPECIES 933 SYCN (ENSANAG00000029479) ENSANAG00000024370 ENSANAG00000024090 ENSANAG00000038327 LRFN1 (ENSANAG00000036772) GMFG (ENSANAG00000033907) SAMD4B (ENSANAG00000035142) PAF1 (ENSANAG00000019380) MED29 (ENSANAG00000023429) ZFP36 (ENSANAG00000034306) PLEKHG2 (ENSANAG00000034357) RPS16 (ENSANAG00000038201) SUPT5H (ENSANAG00000033469) TIMM50 (ENSANAG00000033594) DLL3 (ENSANAG00000036523) ENSANAG00000036002 #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 Marmoset MODERN SPECIES 2 RNF26 (ENSCJAG00000014065) #10 C1QTNF5 (ENSCJAG00000057413) MFRP (ENSCJAG00000014068) #11 USP2 (ENSCJAG00000014080) #12 THY1 (ENSCJAG00000068403) #13 NECTIN1 (ENSCJAG00000014126) #14 ENSCJAG00000076872 TRIM29 (ENSCJAG00000014137) #15 OAF (ENSCJAG00000067985) #16 POU2F3 (ENSCJAG00000014166) #17 TLCD5 (ENSCJAG00000014193) #18 ARHGEF12 (ENSCJAG00000014200) #19 GRIK4 (ENSCJAG00000007360) #20 TBCEL (ENSCJAG00000007368) #21 ENSCJAG00000078066 TECTA (ENSCJAG00000007401) #22 ENSCJAG00000007436 #23 SORL1 (ENSCJAG00000007446) #24 UBASH3B (ENSCJAG00000043067) #26 CRTAM (ENSCJAG00000007623) #27 JHY (ENSCJAG00000007637) #28 BSX (ENSCJAG00000076416) #29 ENSCJAG00000007648 ##31 ENSCJAG00000073028 GRAMD1B (ENSCJAG00000007699) #34 SCN3B (ENSCJAG00000007754) ZNF202 (ENSCJAG00000007782) OR6X1 (ENSCJAG00000023448) TMEM225 (ENSCJAG00000080615) OR8D4 (ENSCJAG00000007793) OR4D5 (ENSCJAG00000022106) Cebidae_a ANCESTRAL SPECIES 22 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000011564 ENSGT01040000240383.b.a.b Bolivian squirrel monkey MODERN SPECIES 50 MCAM (ENSSBOG00000014956) #8 ENSSBOG00000021803 RNF26 (ENSSBOG00000018484) #10 C1QTNF5 (ENSSBOG00000028009) MFRP (ENSSBOG00000021656) #11 USP2 (ENSSBOG00000034295) #12 THY1 (ENSSBOG00000021168) #13 NECTIN1 (ENSSBOG00000027245) #14 TRIM29 (ENSSBOG00000021760) #15 OAF (ENSSBOG00000020591) #16 POU2F3 (ENSSBOG00000033756) #17 TLCD5 (ENSSBOG00000025172) #18 ARHGEF12 (ENSSBOG00000020565) #19 GRIK4 (ENSSBOG00000030277) #20 TBCEL (ENSSBOG00000028041) #21 TECTA (ENSSBOG00000019507) #22 SC5D (ENSSBOG00000020424) #23 ENSSBOG00000015796 SORL1 (ENSSBOG00000027914) #24 BLID (ENSSBOG00000028902) ENSSBOG00000032996 UBASH3B (ENSSBOG00000026096) #26 CRTAM (ENSSBOG00000020006) #27 ENSSBOG00000019647 JHY (ENSSBOG00000020543) #28 BSX (ENSSBOG00000035292) #29 ENSSBOG00000033034 ENSSBOG00000032961 ##31 ENSSBOG00000029761 ENSSBOG00000035266 #33 CLMP (ENSSBOG00000033154) #32 Capuchin DUPLICATION Capuchin MODERN SPECIES 306 ENSCCAG00000025630 ENSCCAG00000020035 ENSCCAG00000037207 IFNL1 (ENSCCAG00000026767) LRFN1 (ENSCCAG00000036504) GMFG (ENSCCAG00000032809) SAMD4B (ENSCCAG00000031381) PAF1 (ENSCCAG00000031701) MED29 (ENSCCAG00000023861) ZFP36 (ENSCCAG00000034094) PLEKHG2 (ENSCCAG00000035672) RPS16 (ENSCCAG00000031391) SUPT5H (ENSCCAG00000034052) TIMM50 (ENSCCAG00000035046) DLL3 (ENSCCAG00000011332) ENSCCAG00000028543 #22 ENSCCAG00000035525 FBL (ENSCCAG00000004830) DYRK1B (ENSCCAG00000022366) LEUTX (ENSCCAG00000035907) ENSCCAG00000020564 LGALS14 (ENSCCAG00000032686) ENSCCAG00000024089 ENSCCAG00000034746 ENSCCAG00000020835 EID2 (ENSCCAG00000019321) SELENOV (ENSCCAG00000005905) PSMC4 (ENSCCAG00000012469) ZNF546 (ENSCCAG00000034995) ZNF780B (ENSCCAG00000024250) MAP3K10 (ENSCCAG00000024098) Capuchin MODERN SPECIES 28 MCAM (ENSCCAG00000032195) #8 ENSCCAG00000021048 RNF26 (ENSCCAG00000019825) #10 ENSCCAG00000021418 MFRP (ENSCCAG00000037590) #11 USP2 (ENSCCAG00000033760) #12 THY1 (ENSCCAG00000030161) #13 NECTIN1 (ENSCCAG00000022347) #14 TRIM29 (ENSCCAG00000021431) #15 OAF (ENSCCAG00000020197) #16 POU2F3 (ENSCCAG00000037738) #17 TLCD5 (ENSCCAG00000029279) #18 ARHGEF12 (ENSCCAG00000027602) #19 GRIK4 (ENSCCAG00000009167) #20 TBCEL (ENSCCAG00000019888) #21 TECTA (ENSCCAG00000020047) #22 SC5D (ENSCCAG00000014865) #23 ENSCCAG00000028386 SORL1 (ENSCCAG00000027625) #24 ENSCCAG00000035645 BLID (ENSCCAG00000037791) UBASH3B (ENSCCAG00000022485) #26 CRTAM (ENSCCAG00000036495) #27 JHY (ENSCCAG00000027110) #28 BSX (ENSCCAG00000028134) #29 ENSCCAG00000033437 ##31 CLMP (ENSCCAG00000030124) #32 ENSCCAG00000034426 #33 ENSCCAG00000015827 GRAMD1B (ENSCCAG00000036156) #34 ENSCCAG00000029538 Tarsier MODERN SPECIES 3531 TBCEL (ENSTSYG00000031311) #21 TECTA (ENSTSYG00000005888) #22 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101.l #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a ENSGT00390000011564 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101.l #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a ENSGT01050000244869.a.a.b Lemuriformes_a ANCESTRAL SPECIES 22 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101.l #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a ENSGT00390000011564 Coquerels sifaka MODERN SPECIES 322 NECTIN1 (ENSPCOG00000021908) #14 TRIM29 (ENSPCOG00000015865) #15 OAF (ENSPCOG00000020839) #16 POU2F3 (ENSPCOG00000009066) #17 TLCD5 (ENSPCOG00000027456) #18 ARHGEF12 (ENSPCOG00000001476) #19 GRIK4 (ENSPCOG00000027128) #20 TBCEL (ENSPCOG00000027242) #21 TECTA (ENSPCOG00000015732) #22 SC5D (ENSPCOG00000022863) #23 SORL1 (ENSPCOG00000007331) #24 UBASH3B (ENSPCOG00000018026) #26 CRTAM (ENSPCOG00000026180) #27 JHY (ENSPCOG00000022404) #28 BSX (ENSPCOG00000018472) #29 ENSPCOG00000015088 ##31 CLMP (ENSPCOG00000024309) #32 ENSPCOG00000009328 GRAMD1B (ENSPCOG00000017678) #34 SCN3B (ENSPCOG00000021142) ENSPCOG00000003859 ENSPCOG00000005658 ZNF202 (ENSPCOG00000021665) TMEM225 (ENSPCOG00000025543) Greater bamboo lemur MODERN SPECIES 351 CBL (ENSPSMG00000004511) #7 MCAM (ENSPSMG00000004606) #8 RNF26 (ENSPSMG00000004641) #10 C1QTNF5 (ENSPSMG00000004643) MFRP (ENSPSMG00000004654) #11 USP2 (ENSPSMG00000004757) #12 THY1 (ENSPSMG00000004899) #13 NECTIN1 (ENSPSMG00000004922) #14 TRIM29 (ENSPSMG00000004954) #15 OAF (ENSPSMG00000004988) #16 POU2F3 (ENSPSMG00000004997) #17 TLCD5 (ENSPSMG00000005005) #18 ARHGEF12 (ENSPSMG00000005221) #19 GRIK4 (ENSPSMG00000005336) #20 TBCEL (ENSPSMG00000005346) #21 TECTA (ENSPSMG00000005371) #22 SC5D (ENSPSMG00000005391) #23 SORL1 (ENSPSMG00000005513) #24 UBASH3B (ENSPSMG00000005673) #26 CRTAM (ENSPSMG00000005688) #27 ENSPSMG00000005695 #28 ENSPSMG00000005705 BSX (ENSPSMG00000005715) #29 HSPA8 (ENSPSMG00000005856) ##31 CLMP (ENSPSMG00000006159) #32 GRAMD1B (ENSPSMG00000006531) #34 SCN3B (ENSPSMG00000007278) ZNF202 (ENSPSMG00000007304) OR6X1 (ENSPSMG00000007311) OR6M1 (ENSPSMG00000007312) ENSPSMG00000007320 Bushbaby MODERN SPECIES 223 C1QTNF5 (ENSOGAG00000033564) MFRP (ENSOGAG00000007334) #11 USP2 (ENSOGAG00000007337) #12 ENSOGAG00000024281 THY1 (ENSOGAG00000007340) #13 ENSOGAG00000032505 NECTIN1 (ENSOGAG00000007344) #14 TRIM29 (ENSOGAG00000030610) #15 OAF (ENSOGAG00000013849) #16 POU2F3 (ENSOGAG00000010523) #17 TLCD5 (ENSOGAG00000025616) #18 ENSOGAG00000033051 ARHGEF12 (ENSOGAG00000010533) #19 GRIK4 (ENSOGAG00000001541) #20 TBCEL (ENSOGAG00000001545) #21 TECTA (ENSOGAG00000001548) #22 SC5D (ENSOGAG00000001274) #23 SORL1 (ENSOGAG00000009277) #24 UBASH3B (ENSOGAG00000005102) #26 CRTAM (ENSOGAG00000005105) #27 ENSOGAG00000032137 JHY (ENSOGAG00000011458) #28 BSX (ENSOGAG00000014479) #29 ENSOGAG00000031566 ##31 CLMP (ENSOGAG00000007360) #32 ENSOGAG00000025441 #34 ENSOGAG00000014595 #34 SCN3B (ENSOGAG00000014602) ZNF202 (ENSOGAG00000026373) ENSOGAG00000014613 OR6M1 (ENSOGAG00000014607) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Tree shrew MODERN SPECIES 322 TECTA (ENSTBEG00000006047) #22 Glires ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Lagomorpha ANCESTRAL SPECIES 136 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00940000161031 #32 ENSGT00950000183206.b.c.b ##31 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 ENSGT01050000244869.b Rabbit MODERN SPECIES BACE1 (ENSOCUG00000022776) CEP164 (ENSOCUG00000010318) DSCAML1 (ENSOCUG00000010335) FXYD2 (ENSOCUG00000010359) FXYD6 (ENSOCUG00000005593) ENSOCUG00000030071 NECTIN1 (ENSOCUG00000010458) #14 ENSOCUG00000028128 TRIM29 (ENSOCUG00000021297) #15 OAF (ENSOCUG00000025219) #16 POU2F3 (ENSOCUG00000002831) #17 TLCD5 (ENSOCUG00000005192) #18 ARHGEF12 (ENSOCUG00000005196) #19 GRIK4 (ENSOCUG00000002692) #20 TBCEL (ENSOCUG00000002876) #21 TECTA (ENSOCUG00000001263) #22 ENSOCUG00000031744 SC5D (ENSOCUG00000011339) #23 SORL1 (ENSOCUG00000011346) #24 UBASH3B (ENSOCUG00000013072) #26 CRTAM (ENSOCUG00000013086) #27 JHY (ENSOCUG00000015523) #28 BSX (ENSOCUG00000002684) #29 ENSOCUG00000037082 ENSOCUG00000015533 ##31 GRAMD1B (ENSOCUG00000010493) #34 SCN3B (ENSOCUG00000010502) ENSOCUG00000010504 ZNF202 (ENSOCUG00000014264) ENSOCUG00000002687 ENSOCUG00000020903 Pika MODERN SPECIES 3993 OAF (ENSOPRG00000005370) #16 POU2F3 (ENSOPRG00000005379) #17 TLCD5 (ENSOPRG00000005406) #18 ARHGEF12 (ENSOPRG00000005412) #19 GRIK4 (ENSOPRG00000005483) #20 TBCEL (ENSOPRG00000005511) #21 TECTA (ENSOPRG00000005527) #22 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 Rodentia_B ANCESTRAL SPECIES 23 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Kangaroo rat MODERN SPECIES 329 Mcam (ENSDORG00000014625) #8 ENSDORG00000030084 #10 C1qtnf5 (ENSDORG00000014627) Mfrp (ENSDORG00000014629) #11 ENSDORG00000024719 Thy1 (ENSDORG00000028907) #13 ENSDORG00000023239 Nectin1 (ENSDORG00000000398) #14 Trim29 (ENSDORG00000007322) #15 ENSDORG00000028006 #16 Pou2f3 (ENSDORG00000003563) #17 Tlcd5 (ENSDORG00000025068) #18 Arhgef12 (ENSDORG00000007308) #19 Grik4 (ENSDORG00000009556) #20 Tbcel (ENSDORG00000025652) #21 Tecta (ENSDORG00000008805) #22 Sc5d (ENSDORG00000011258) #23 Sorl1 (ENSDORG00000002124) #24 Ubash3b (ENSDORG00000011099) #26 Crtam (ENSDORG00000001816) #27 Jhy (ENSDORG00000014465) #28 Bsx (ENSDORG00000027972) #29 ENSDORG00000015467 ##31 Clmp (ENSDORG00000026028) #32 Gramd1b (ENSDORG00000003924) #34 Scn3b (ENSDORG00000003926) Zfp202 (ENSDORG00000004781) ENSDORG00000004785 ENSDORG00000003347 ENSDORG00000012306 ENSDORG00000030210 Myomorpha ANCESTRAL SPECIES 23 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Lesser Egyptian jerboa MODERN SPECIES 142 Mcam (ENSJJAG00000014314) #8 C1qtnf5 (ENSJJAG00000014085) Mfrp (ENSJJAG00000013394) #11 ENSJJAG00000012486 Thy1 (ENSJJAG00000012028) #13 ENSJJAG00000014022 ENSJJAG00000016113 Nectin1 (ENSJJAG00000015953) #14 Trim29 (ENSJJAG00000015693) #15 Oaf (ENSJJAG00000015119) #16 Pou2f3 (ENSJJAG00000014254) #17 Tlcd5 (ENSJJAG00000013409) #18 Arhgef12 (ENSJJAG00000008231) #19 Grik4 (ENSJJAG00000022344) #20 Tbcel (ENSJJAG00000020854) #21 Tecta (ENSJJAG00000018896) #22 Sc5d (ENSJJAG00000017694) #23 Sorl1 (ENSJJAG00000017298) #24 Ubash3b (ENSJJAG00000016033) #26 Crtam (ENSJJAG00000014838) #27 Jhy (ENSJJAG00000013871) #28 Bsx (ENSJJAG00000013198) #29 Hspa8 (ENSJJAG00000012917) #31 Clmp (ENSJJAG00000012798) #32 Pcnt (ENSJJAG00000011857) Dip2a (ENSJJAG00000009803) S100b (ENSJJAG00000012400) Prmt2 (ENSJJAG00000010743) Ltbp1 (ENSJJAG00000023271) Ttc27 (ENSJJAG00000016727) Birc6 (ENSJJAG00000000153) Muroidea ANCESTRAL SPECIES 29 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Cricetinae ANCESTRAL SPECIES 6 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Golden Hamster MODERN SPECIES 635 ENSMAUG00000022099 #7 Mcam (ENSMAUG00000018109) #8 C1qtnf5 (ENSMAUG00000002647) Mfrp (ENSMAUG00000019232) #11 ENSMAUG00000021537 #12 Thy1 (ENSMAUG00000012348) #13 Nectin1 (ENSMAUG00000008955) #14 Trim29 (ENSMAUG00000016385) #15 Oaf (ENSMAUG00000010047) #16 ENSMAUG00000010627 Pou2f3 (ENSMAUG00000016359) #17 Tlcd5 (ENSMAUG00000018827) #18 Arhgef12 (ENSMAUG00000013007) #19 Grik4 (ENSMAUG00000012098) #20 Tbcel (ENSMAUG00000021001) #21 Tecta (ENSMAUG00000021166) #22 Sc5d (ENSMAUG00000014340) #23 Sorl1 (ENSMAUG00000014163) #24 Ubash3b (ENSMAUG00000003703) #26 Crtam (ENSMAUG00000010485) #27 Jhy (ENSMAUG00000013429) #28 Bsx (ENSMAUG00000019955) #29 Hspa8 (ENSMAUG00000012651) #31 Clmp (ENSMAUG00000021491) #32 Gramd1b (ENSMAUG00000011877) #34 Scn3b (ENSMAUG00000013392) ENSMAUG00000009397 Or6x1 (ENSMAUG00000009065) Tmem225 (ENSMAUG00000018342) Or8d4 (ENSMAUG00000009232) ENSMAUG00000022214 Chinese hamster chok1gshd MODERN SPECIES 284 Mcam (ENSCGRG00001014043) #8 ENSCGRG00001005426 #10 C1qtnf5 (ENSCGRG00001016723) Mfrp (ENSCGRG00001017647) #11 Usp2 (ENSCGRG00001016286) #12 Thy1 (ENSCGRG00001001406) #13 ENSCGRG00001011094 Nectin1 (ENSCGRG00001008640) #14 Trim29 (ENSCGRG00001014242) #15 Oaf (ENSCGRG00001018323) #16 Pou2f3 (ENSCGRG00001012087) #17 Tlcd5 (ENSCGRG00001014506) #18 Arhgef12 (ENSCGRG00001003759) #19 Grik4 (ENSCGRG00001023572) #20 Tbcel (ENSCGRG00001001381) #21 Tecta (ENSCGRG00001023887) #22 Sc5d (ENSCGRG00001019376) #23 Sorl1 (ENSCGRG00001006014) #24 Ubash3b (ENSCGRG00001023441) #26 Crtam (ENSCGRG00001024613) #27 Jhy (ENSCGRG00001019158) #28 Bsx (ENSCGRG00001010422) #29 Cricetidae_B ANCESTRAL SPECIES 16 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Northern American deer mouse MODERN SPECIES 20 Ccdc153 (ENSPEMG00000007870) Cbl (ENSPEMG00000023847) #7 Mcam (ENSPEMG00000003786) #8 C1qtnf5 (ENSPEMG00000010725) Mfrp (ENSPEMG00000017956) #11 Usp2 (ENSPEMG00000024068) #12 Thy1 (ENSPEMG00000025576) #13 Nectin1 (ENSPEMG00000000009) #14 Trim29 (ENSPEMG00000020223) #15 Oaf (ENSPEMG00000019857) #16 Pou2f3 (ENSPEMG00000017517) #17 Tlcd5 (ENSPEMG00000028823) #18 Arhgef12 (ENSPEMG00000004297) #19 Grik4 (ENSPEMG00000019743) #20 Tbcel (ENSPEMG00000019830) #21 Tecta (ENSPEMG00000019833) #22 Sc5d (ENSPEMG00000019479) #23 Sorl1 (ENSPEMG00000020008) #24 ENSPEMG00000030566 ENSPEMG00000012971 Ubash3b (ENSPEMG00000020009) #26 Crtam (ENSPEMG00000020104) #27 Jhy (ENSPEMG00000019964) #28 Bsx (ENSPEMG00000019624) #29 Hspa8 (ENSPEMG00000019570) #31 Clmp (ENSPEMG00000000129) #32 Gramd1b (ENSPEMG00000006423) #34 Scn3b (ENSPEMG00000028495) Zfp202 (ENSPEMG00000012772) Or6x1 (ENSPEMG00000012780) Tmem225 (ENSPEMG00000019872) Prairie vole MODERN SPECIES 13 Cbl (ENSMOCG00000008619) #7 Mcam (ENSMOCG00000020037) #8 C1qtnf5 (ENSMOCG00000016995) Mfrp (ENSMOCG00000021315) #11 Usp2 (ENSMOCG00000011563) #12 Thy1 (ENSMOCG00000000954) #13 ENSMOCG00000012324 Nectin1 (ENSMOCG00000005304) #14 Trim29 (ENSMOCG00000005539) #15 Oaf (ENSMOCG00000018469) #16 Pou2f3 (ENSMOCG00000015293) #17 Tlcd5 (ENSMOCG00000015604) #18 Arhgef12 (ENSMOCG00000022529) #19 Grik4 (ENSMOCG00000022422) #20 Tbcel (ENSMOCG00000012495) #21 Tecta (ENSMOCG00000007372) #22 Sc5d (ENSMOCG00000012716) #23 Sorl1 (ENSMOCG00000009449) #24 Ubash3b (ENSMOCG00000008480) #26 Crtam (ENSMOCG00000012290) #27 Jhy (ENSMOCG00000018657) #28 Bsx (ENSMOCG00000017866) #29 Hspa8 (ENSMOCG00000012873) #31 Clmp (ENSMOCG00000008613) #32 ENSMOCG00000006783 ENSMOCG00000017933 Gramd1b (ENSMOCG00000012512) #34 Scn3b (ENSMOCG00000005991) ENSMOCG00000006381 Or6x1 (ENSMOCG00000007071) Tmem225 (ENSMOCG00000002925) Murinae ANCESTRAL SPECIES 3 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Mus ANCESTRAL SPECIES 4 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00900000143378 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Mus_A ANCESTRAL SPECIES 4 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00900000143378 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Mus_B ANCESTRAL SPECIES 3 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00900000143378 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b ENSGT00940000163057 Mus_C ANCESTRAL SPECIES 8 ENSGT00940000155838 #8 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00900000143378 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT01090000260664.b ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01040000240383.b.a.b Steppe mouse MODERN SPECIES 3184 ENSMSIG00000019202 #20 Tbcel (ENSMSIG00000019035) #21 Tecta (ENSMSIG00000018925) #22 ENSMSIG00000018914 Sc5d (ENSMSIG00000018892) #23 Sorl1 (ENSMSIG00000018706) #24 Ubash3b (ENSMSIG00000018629) #26 Crtam (ENSMSIG00000018539) #27 Jhy (ENSMSIG00000018525) #28 Bsx (ENSMSIG00000018506) #29 Hspa8 (ENSMSIG00000018401) #31 Clmp (ENSMSIG00000018379) #32 ENSMSIG00000018372 ENSMSIG00000018352 Gramd1b (ENSMSIG00000018149) #34 Scn3b (ENSMSIG00000018041) Zfp202 (ENSMSIG00000017972) Or6x1 (ENSMSIG00000017957) spretus MODERN SPECIES 18 Mcam (MGP_SPRETEiJ_G0033238) #8 C1qtnf5 (MGP_SPRETEiJ_G0033237) Mfrp (MGP_SPRETEiJ_G0033236) #11 Usp2 (MGP_SPRETEiJ_G0033235) #12 Thy1 (MGP_SPRETEiJ_G0033234) #13 MGP_SPRETEiJ_G0033233 Nectin1 (MGP_SPRETEiJ_G0033232) #14 Trim29 (MGP_SPRETEiJ_G0033231) #15 MGP_SPRETEiJ_G0033230 Oaf (MGP_SPRETEiJ_G0033229) #16 Pou2f3 (MGP_SPRETEiJ_G0033228) #17 Tlcd5 (MGP_SPRETEiJ_G0033227) #18 Arhgef12 (MGP_SPRETEiJ_G0033226) #19 Grik4 (MGP_SPRETEiJ_G0033225) #20 Tbcel (MGP_SPRETEiJ_G0033224) #21 Tecta (MGP_SPRETEiJ_G0033223) #22 Sc5d (MGP_SPRETEiJ_G0033222) #23 Sorl1 (MGP_SPRETEiJ_G0033221) #24 Ubash3b (MGP_SPRETEiJ_G0033220) #26 Crtam (MGP_SPRETEiJ_G0033219) #27 MGP_SPRETEiJ_G0033218 Bsx (MGP_SPRETEiJ_G0033217) #29 MGP_SPRETEiJ_G0033216 ##31 Clmp (MGP_SPRETEiJ_G0033215) #32 MGP_SPRETEiJ_G0033214 Gramd1b (MGP_SPRETEiJ_G0033213) #34 Scn3b (MGP_SPRETEiJ_G0033212) Zfp202 (MGP_SPRETEiJ_G0033211) Or6x1 (MGP_SPRETEiJ_G0033210) Tmem225 (MGP_SPRETEiJ_G0033209) Or8d4 (MGP_SPRETEiJ_G0033208) Mouse MODERN SPECIES 18 Mcam (ENSMUSG00000032135) #8 C1qtnf5 (ENSMUSG00000079592) Mfrp (ENSMUSG00000034739) #11 Rnf26 (ENSMUSG00000053128) #10 Usp2 (ENSMUSG00000032010) #12 Gm49380 (ENSMUSG00000111409) #10 Thy1 (ENSMUSG00000032011) #13 Nectin1 (ENSMUSG00000032012) #14 Trim29 (ENSMUSG00000032013) #15 Oaf (ENSMUSG00000032014) #16 Pou2f3 (ENSMUSG00000032015) #17 Tlcd5 (ENSMUSG00000048503) #18 Arhgef12 (ENSMUSG00000059495) #19 Grik4 (ENSMUSG00000032017) #20 Tbcel (ENSMUSG00000037287) #21 Tecta (ENSMUSG00000037705) #22 Sc5d (ENSMUSG00000032018) #23 Sorl1 (ENSMUSG00000049313) #24 Ubash3b (ENSMUSG00000032020) #26 Crtam (ENSMUSG00000032021) #27 Jhy (ENSMUSG00000032023) #28 Bsx (ENSMUSG00000054360) #29 Hspa8 (ENSMUSG00000015656) #31 Clmp (ENSMUSG00000032024) #32 Gramd1b (ENSMUSG00000040111) #34 Scn3b (ENSMUSG00000049281) Zfp202 (ENSMUSG00000025602) Or6x1 (ENSMUSG00000051095) Tmem225 (ENSMUSG00000040541) Or8d4 (ENSMUSG00000049073) Or4d5 (ENSMUSG00000045812) Ryukyu mouse MODERN SPECIES 18 C1qtnf5 (MGP_CAROLIEiJ_G0032099) Mfrp (MGP_CAROLIEiJ_G0032098) #11 Usp2 (MGP_CAROLIEiJ_G0032097) #12 MGP_CAROLIEiJ_G0032096 #10 Thy1 (MGP_CAROLIEiJ_G0032095) #13 MGP_CAROLIEiJ_G0032094 Nectin1 (MGP_CAROLIEiJ_G0032093) #14 Trim29 (MGP_CAROLIEiJ_G0032092) #15 MGP_CAROLIEiJ_G0032091 Oaf (MGP_CAROLIEiJ_G0032090) #16 Pou2f3 (MGP_CAROLIEiJ_G0032089) #17 Tlcd5 (MGP_CAROLIEiJ_G0032088) #18 Arhgef12 (MGP_CAROLIEiJ_G0032087) #19 Grik4 (MGP_CAROLIEiJ_G0032086) #20 Tbcel (MGP_CAROLIEiJ_G0032085) #21 Tecta (MGP_CAROLIEiJ_G0032084) #22 Sc5d (MGP_CAROLIEiJ_G0032083) #23 Sorl1 (MGP_CAROLIEiJ_G0032082) #24 Ubash3b (MGP_CAROLIEiJ_G0032081) #26 Crtam (MGP_CAROLIEiJ_G0032080) #27 Jhy (MGP_CAROLIEiJ_G0032079) #28 Bsx (MGP_CAROLIEiJ_G0032078) #29 Clmp (MGP_CAROLIEiJ_G0032077) #32 MGP_CAROLIEiJ_G0032076 MGP_CAROLIEiJ_G0032075 Gramd1b (MGP_CAROLIEiJ_G0032074) #34 Scn3b (MGP_CAROLIEiJ_G0032073) Zfp202 (MGP_CAROLIEiJ_G0032072) Or6x1 (MGP_CAROLIEiJ_G0032071) Tmem225 (MGP_CAROLIEiJ_G0032070) Or8d4 (MGP_CAROLIEiJ_G0032069) Shrew mouse MODERN SPECIES 1 C1qtnf5 (MGP_PahariEiJ_G0014968) Mfrp (MGP_PahariEiJ_G0014967) #11 Usp2 (MGP_PahariEiJ_G0014966) #12 MGP_PahariEiJ_G0014965 #10 Thy1 (MGP_PahariEiJ_G0014964) #13 MGP_PahariEiJ_G0014963 Nectin1 (MGP_PahariEiJ_G0014962) #14 Trim29 (MGP_PahariEiJ_G0014961) #15 MGP_PahariEiJ_G0014960 Oaf (MGP_PahariEiJ_G0014959) #16 Pou2f3 (MGP_PahariEiJ_G0014958) #17 Tlcd5 (MGP_PahariEiJ_G0014957) #18 Arhgef12 (MGP_PahariEiJ_G0014956) #19 Grik4 (MGP_PahariEiJ_G0014955) #20 Tbcel (MGP_PahariEiJ_G0014954) #21 Tecta (MGP_PahariEiJ_G0014953) #22 Sc5d (MGP_PahariEiJ_G0014952) #23 Sorl1 (MGP_PahariEiJ_G0014951) #24 Ubash3b (MGP_PahariEiJ_G0014950) #26 Crtam (MGP_PahariEiJ_G0014949) #27 Jhy (MGP_PahariEiJ_G0014948) #28 Bsx (MGP_PahariEiJ_G0014947) #29 Hspa8 (MGP_PahariEiJ_G0014946) #31 Clmp (MGP_PahariEiJ_G0014945) #32 MGP_PahariEiJ_G0014944 Gramd1b (MGP_PahariEiJ_G0014943) #34 Scn3b (MGP_PahariEiJ_G0014942) Zfp202 (MGP_PahariEiJ_G0014941) Or6x1 (MGP_PahariEiJ_G0014940) Tmem225 (MGP_PahariEiJ_G0014939) Or8d4 (MGP_PahariEiJ_G0014938) Rat MODERN SPECIES 18 Ccdc153 (ENSRNOG00000039086) Cbl (ENSRNOG00000008444) #7 Mcam (ENSRNOG00000007726) #8 C1qtnf5 (ENSRNOG00000007613) Mfrp (ENSRNOG00000039107) #11 Usp2 (ENSRNOG00000006663) #12 Thy1 (ENSRNOG00000006604) #13 Nectin1 (ENSRNOG00000006403) #14 Trim29 (ENSRNOG00000021771) #15 Oaf (ENSRNOG00000009243) #16 Pou2f3 (ENSRNOG00000009118) #17 Tlcd5 (ENSRNOG00000021793) #18 Arhgef12 (ENSRNOG00000008924) #19 Grik4 (ENSRNOG00000030910) #20 Tbcel (ENSRNOG00000032364) #21 Tecta (ENSRNOG00000031126) #22 Sc5d (ENSRNOG00000065944) #23 Sorl1 (ENSRNOG00000064634) #24 LOC120094123 (ENSRNOG00000064399) AABR07070043.1 (ENSRNOG00000050630) Ubash3b (ENSRNOG00000008187) #26 Crtam (ENSRNOG00000008153) #27 Jhy (ENSRNOG00000008138) #28 Bsx (ENSRNOG00000024438) #29 Hspa8 (ENSRNOG00000034066) #31 Clmp (ENSRNOG00000053239) #32 Gramd1b (ENSRNOG00000053577) #34 Scn3b (ENSRNOG00000057221) Zfp202 (ENSRNOG00000058932) Or6x1 (ENSRNOG00000065544) Tmem225 (ENSRNOG00000054439) Upper Galilee mountains blind mole rat MODERN SPECIES 1889 Cbl (ENSNGAG00000021221) #7 Mcam (ENSNGAG00000022720) #8 C1qtnf5 (ENSNGAG00000023822) Mfrp (ENSNGAG00000024285) #11 ENSNGAG00000022179 Thy1 (ENSNGAG00000023265) #13 ENSNGAG00000023549 Nectin1 (ENSNGAG00000018208) #14 Trim29 (ENSNGAG00000020925) #15 Oaf (ENSNGAG00000011846) #16 Pou2f3 (ENSNGAG00000012581) #17 Tlcd5 (ENSNGAG00000016671) #18 Arhgef12 (ENSNGAG00000012115) #19 Grik4 (ENSNGAG00000023666) #20 Tbcel (ENSNGAG00000017476) #21 Tecta (ENSNGAG00000023948) #22 ENSNGAG00000022481 #23 Sorl1 (ENSNGAG00000017411) #24 Ubash3b (ENSNGAG00000014740) #26 Crtam (ENSNGAG00000022401) #27 Jhy (ENSNGAG00000001947) #28 Bsx (ENSNGAG00000024248) #29 Hspa8 (ENSNGAG00000011644) #31 Clmp (ENSNGAG00000019063) #32 ENSNGAG00000023270 Gramd1b (ENSNGAG00000020444) #34 Scn3b (ENSNGAG00000020223) ENSNGAG00000020546 Zfp202 (ENSNGAG00000022157) ENSNGAG00000014331 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 Sciuridae ANCESTRAL SPECIES 2 ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 Marmotini ANCESTRAL SPECIES 20 ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584.o #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 Marmotini_b ANCESTRAL SPECIES 43 ENSGT00910000148666 ENSGT00940000155838 #8 ENSGT00390000016584.o #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 ENSGT01040000240383.b.a.b Arctic ground squirrel MODERN SPECIES 291 ENSUPAG00010018655 MCAM (ENSUPAG00010018664) #8 ENSUPAG00010018736 #10 C1QTNF5 (ENSUPAG00010018740) MFRP (ENSUPAG00010018750) #11 USP2 (ENSUPAG00010018785) #12 THY1 (ENSUPAG00010018968) #13 NECTIN1 (ENSUPAG00010018985) #14 TRIM29 (ENSUPAG00010018992) #15 OAF (ENSUPAG00010019004) #16 POU2F3 (ENSUPAG00010019015) #17 TLCD5 (ENSUPAG00010019046) #18 ARHGEF12 (ENSUPAG00010019053) #19 GRIK4 (ENSUPAG00010019127) #20 TBCEL (ENSUPAG00010019167) #21 TECTA (ENSUPAG00010019193) #22 SC5D (ENSUPAG00010019233) #23 SORL1 (ENSUPAG00010019264) #24 Squirrel MODERN SPECIES 142 CBL (ENSSTOG00000005298) #7 MCAM (ENSSTOG00000019932) #8 ENSSTOG00000026036 #10 C1QTNF5 (ENSSTOG00000022915) MFRP (ENSSTOG00000005406) #11 USP2 (ENSSTOG00000005428) #12 THY1 (ENSSTOG00000005455) #13 NECTIN1 (ENSSTOG00000029172) #14 TRIM29 (ENSSTOG00000001978) #15 OAF (ENSSTOG00000026759) #16 POU2F3 (ENSSTOG00000015839) #17 TLCD5 (ENSSTOG00000022791) #18 ARHGEF12 (ENSSTOG00000015856) #19 GRIK4 (ENSSTOG00000015883) #20 TBCEL (ENSSTOG00000015896) #21 TECTA (ENSSTOG00000009622) #22 SC5D (ENSSTOG00000008946) #23 SORL1 (ENSSTOG00000003552) #24 ENSSTOG00000020141 UBASH3B (ENSSTOG00000006728) #26 JHY (ENSSTOG00000022876) #28 BSX (ENSSTOG00000021809) #29 ENSSTOG00000003756 ##31 CLMP (ENSSTOG00000003773) #32 ENSSTOG00000027106 #34 GRAMD1B (ENSSTOG00000016452) #34 SCN3B (ENSSTOG00000016456) ZNF202 (ENSSTOG00000027536) OR6X1 (ENSSTOG00000026454) OR6M1 (ENSSTOG00000023615) OR8D4 (ENSSTOG00000003953) Alpin marmot MODERN SPECIES 25 CBL (ENSMMMG00000022366) #7 MCAM (ENSMMMG00000022337) #8 ENSMMMG00000022331 #10 C1QTNF5 (ENSMMMG00000022321) MFRP (ENSMMMG00000022302) #11 USP2 (ENSMMMG00000022252) #12 THY1 (ENSMMMG00000022247) #13 NECTIN1 (ENSMMMG00000022229) #14 TRIM29 (ENSMMMG00000022209) #15 OAF (ENSMMMG00000022206) #16 POU2F3 (ENSMMMG00000022201) #17 TLCD5 (ENSMMMG00000022200) #18 ENSMMMG00000022179 #19 GRIK4 (ENSMMMG00000022153) #20 TBCEL (ENSMMMG00000022111) #21 TECTA (ENSMMMG00000022096) #22 SC5D (ENSMMMG00000022092) #23 SORL1 (ENSMMMG00000022068) #24 ENSMMMG00000022058 UBASH3B (ENSMMMG00000022045) #26 CRTAM (ENSMMMG00000022027) #27 JHY (ENSMMMG00000022018) #28 BSX (ENSMMMG00000022013) #29 ENSMMMG00000022001 ##31 CLMP (ENSMMMG00000021995) #32 GRAMD1B (ENSMMMG00000021944) #34 SCN3B (ENSMMMG00000021929) ZNF202 (ENSMMMG00000021920) OR6X1 (ENSMMMG00000021917) OR6M1 (ENSMMMG00000021914) ENSMMMG00000021902 Eurasian red squirrel MODERN SPECIES 2 MCAM (ENSSVLG00005016303) #8 RNF26 (ENSSVLG00005016333) #10 C1QTNF5 (ENSSVLG00005016350) MFRP (ENSSVLG00005016384) #11 USP2 (ENSSVLG00005016536) #12 THY1 (ENSSVLG00005016800) #13 ENSSVLG00005016845 NECTIN1 (ENSSVLG00005016885) #14 TRIM29 (ENSSVLG00005016988) #15 OAF (ENSSVLG00005017300) #16 POU2F3 (ENSSVLG00005017350) #17 TLCD5 (ENSSVLG00005017509) #18 ARHGEF12 (ENSSVLG00005017668) #19 GRIK4 (ENSSVLG00005017812) #20 TBCEL (ENSSVLG00005018006) #21 TECTA (ENSSVLG00005018068) #22 SC5D (ENSSVLG00005018507) #23 SORL1 (ENSSVLG00005018596) #24 UBASH3B (ENSSVLG00005019548) #26 CRTAM (ENSSVLG00005019670) #27 JHY (ENSSVLG00005019812) #28 BSX (ENSSVLG00005019921) #29 ENSSVLG00005019956 ENSSVLG00005020047 ##31 CLMP (ENSSVLG00005020407) #32 GRAMD1B (ENSSVLG00005020589) #34 SCN3B (ENSSVLG00005021934) ZNF202 (ENSSVLG00005022010) OR6X1 (ENSSVLG00005022093) OR6M1 (ENSSVLG00005022115) TMEM225 (ENSSVLG00005022135) Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.f ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 ENSGT01040000240383.b.a.b Naked mole-rat female MODERN SPECIES 24 KIRREL3 (ENSHGLG00000006857) ST3GAL4 (ENSHGLG00000046104) DCPS (ENSHGLG00000041279) TIRAP (ENSHGLG00000032073) FOXRED1 (ENSHGLG00000044040) ENSHGLG00000001597 FAM118B (ENSHGLG00000000409) RPUSD4 (ENSHGLG00000002285) ENSHGLG00000041999 CDON (ENSHGLG00000001508) DDX25 (ENSHGLG00000000748) ENSHGLG00000000565 HYLS1 (ENSHGLG00000032168) GRIK4 (ENSHGLG00000001757) #20 TBCEL (ENSHGLG00000040222) #21 TECTA (ENSHGLG00000001489) #22 SC5D (ENSHGLG00000044088) #23 SORL1 (ENSHGLG00000001265) #24 ENSHGLG00000037002 ENSHGLG00000045413 ENSHGLG00000034719 UBASH3B (ENSHGLG00000001126) #26 CRTAM (ENSHGLG00000002032) #27 JHY (ENSHGLG00000001981) #28 BSX (ENSHGLG00000042535) #29 ENSHGLG00000001884 ##31 CLMP (ENSHGLG00000001841) #32 ENSHGLG00000032791 GRAMD1B (ENSHGLG00000001139) #34 SCN3B (ENSHGLG00000038916) ZNF202 (ENSHGLG00000000728) Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.f ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 ENSGT01040000240383.b.a.b Guinea pig MODERN SPECIES 19 MCAM (ENSCPOG00000026038) #8 RNF26 (ENSCPOG00000004509) #10 C1QTNF5 (ENSCPOG00000032489) MFRP (ENSCPOG00000004515) #11 USP2 (ENSCPOG00000004520) #12 THY1 (ENSCPOG00000012275) #13 ENSCPOG00000022924 NECTIN1 (ENSCPOG00000001254) #14 TRIM29 (ENSCPOG00000005979) #15 OAF (ENSCPOG00000037745) #16 POU2F3 (ENSCPOG00000010476) #17 TLCD5 (ENSCPOG00000037960) #18 ARHGEF12 (ENSCPOG00000010479) #19 GRIK4 (ENSCPOG00000002918) #20 TBCEL (ENSCPOG00000009932) #21 TECTA (ENSCPOG00000012043) #22 SC5D (ENSCPOG00000032720) #23 SORL1 (ENSCPOG00000015350) #24 UBASH3B (ENSCPOG00000002154) #26 CRTAM (ENSCPOG00000002159) #27 JHY (ENSCPOG00000002163) #28 BSX (ENSCPOG00000002164) #29 ENSCPOG00000004169 ##31 CLMP (ENSCPOG00000004171) #32 GRAMD1B (ENSCPOG00000014646) #34 SCN3B (ENSCPOG00000038561) ZNF202 (ENSCPOG00000007108) OR6X1 (ENSCPOG00000027255) OR6M1 (ENSCPOG00000015580) OR8D4 (ENSCPOG00000021878) ENSCPOG00000008723 Hystricomorpha_b ANCESTRAL SPECIES 23 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.f ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 ENSGT01040000240383.b.a.b Long-tailed chinchilla MODERN SPECIES 119 MCAM (ENSCLAG00000016437) #8 C1QTNF5 (ENSCLAG00000013955) RNF26 (ENSCLAG00000017073) #10 MFRP (ENSCLAG00000015767) #11 USP2 (ENSCLAG00000013003) #12 THY1 (ENSCLAG00000013561) #13 ENSCLAG00000012333 NECTIN1 (ENSCLAG00000012784) #14 TRIM29 (ENSCLAG00000015449) #15 OAF (ENSCLAG00000014022) #16 POU2F3 (ENSCLAG00000014931) #17 TLCD5 (ENSCLAG00000016010) #18 ARHGEF12 (ENSCLAG00000013240) #19 GRIK4 (ENSCLAG00000013746) #20 TBCEL (ENSCLAG00000012858) #21 TECTA (ENSCLAG00000015701) #22 ENSCLAG00000014057 SC5D (ENSCLAG00000014644) #23 SORL1 (ENSCLAG00000015040) #24 UBASH3B (ENSCLAG00000015024) #26 CRTAM (ENSCLAG00000013885) #27 JHY (ENSCLAG00000015081) #28 BSX (ENSCLAG00000013667) #29 ENSCLAG00000014646 ##31 CLMP (ENSCLAG00000014572) #32 ENSCLAG00000017781 GRAMD1B (ENSCLAG00000014358) #34 SCN3B (ENSCLAG00000016441) ZNF202 (ENSCLAG00000016331) OR6X1 (ENSCLAG00000018065) OR6M1 (ENSCLAG00000017886) Degu MODERN SPECIES 121 MCAM (ENSODEG00000008067) #8 RNF26 (ENSODEG00000007188) #10 C1QTNF5 (ENSODEG00000006895) MFRP (ENSODEG00000007223) #11 ENSODEG00000008794 THY1 (ENSODEG00000008554) #13 ENSODEG00000006811 NECTIN1 (ENSODEG00000006611) #14 TRIM29 (ENSODEG00000008046) #15 OAF (ENSODEG00000007327) #16 POU2F3 (ENSODEG00000006896) #17 ENSODEG00000008437 ARHGEF12 (ENSODEG00000006885) #19 GRIK4 (ENSODEG00000006186) #20 TBCEL (ENSODEG00000005962) #21 TECTA (ENSODEG00000008800) #22 SC5D (ENSODEG00000010056) #23 SORL1 (ENSODEG00000006848) #24 UBASH3B (ENSODEG00000006578) #26 CRTAM (ENSODEG00000006736) #27 JHY (ENSODEG00000005965) #28 BSX (ENSODEG00000006223) #29 ENSODEG00000006143 ##31 CLMP (ENSODEG00000007944) #32 GRAMD1B (ENSODEG00000006791) #34 SCN3B (ENSODEG00000006996) ENSODEG00000019374 OR6X1 (ENSODEG00000019428) ENSODEG00000019404 OR8D4 (ENSODEG00000019380) OR4D5 (ENSODEG00000019378) Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.b #22 Common shrew MODERN SPECIES 791 ENSSARG00000011827 #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Carnivora ANCESTRAL SPECIES 21 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Caniformia ANCESTRAL SPECIES 17 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Ursidae ANCESTRAL SPECIES 15 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352.d #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00950000186240 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b Ursus ANCESTRAL SPECIES 17 ENSGT00390000016289 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352.d #13 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00950000186240 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a.g American black bear MODERN SPECIES 6045 TECTA (ENSUAMG00000012287) #22 Polar bear MODERN SPECIES 166 HINFP (ENSUMAG00000000565) ABCG4 (ENSUMAG00000000220) NLRX1 (ENSUMAG00000000144) CCDC153 (ENSUMAG00000000075) CBL (ENSUMAG00000023576) #7 RNF26 (ENSUMAG00000023565) #10 MFRP (ENSUMAG00000023563) #11 USP2 (ENSUMAG00000023555) #12 THY1 (ENSUMAG00000023552) #13 TRIM29 (ENSUMAG00000023539) #15 POU2F3 (ENSUMAG00000023533) #17 TLCD5 (ENSUMAG00000023528) #18 ARHGEF12 (ENSUMAG00000023009) #19 GRIK4 (ENSUMAG00000022880) #20 TBCEL (ENSUMAG00000022868) #21 TECTA (ENSUMAG00000022830) #22 SC5D (ENSUMAG00000022821) #23 SORL1 (ENSUMAG00000022666) #24 ENSUMAG00000022567 UBASH3B (ENSUMAG00000022541) #26 CRTAM (ENSUMAG00000022530) #27 JHY (ENSUMAG00000022529) #28 BSX (ENSUMAG00000022525) #29 HSPA8 (ENSUMAG00000022513) #31 CLMP (ENSUMAG00000022510) #32 GRAMD1B (ENSUMAG00000022493) #34 SCN3B (ENSUMAG00000022471) ZNF202 (ENSUMAG00000022464) OR6X1 (ENSUMAG00000022463) OR6M1 (ENSUMAG00000022457) ENSUMAG00000022455 Giant Panda MODERN SPECIES 18 CBL (ENSAMEG00000007928) #7 MCAM (ENSAMEG00000007839) #8 RNF26 (ENSAMEG00000019700) #10 MFRP (ENSAMEG00000007827) #11 USP2 (ENSAMEG00000007769) #12 THY1 (ENSAMEG00000007760) #13 NECTIN1 (ENSAMEG00000007738) #14 TRIM29 (ENSAMEG00000007978) #15 OAF (ENSAMEG00000008008) #16 POU2F3 (ENSAMEG00000008014) #17 TLCD5 (ENSAMEG00000030495) #18 ARHGEF12 (ENSAMEG00000008026) #19 GRIK4 (ENSAMEG00000008110) #20 ENSAMEG00000027075 TBCEL (ENSAMEG00000008181) #21 TECTA (ENSAMEG00000008198) #22 SC5D (ENSAMEG00000008222) #23 SORL1 (ENSAMEG00000008234) #24 ENSAMEG00000029575 ENSAMEG00000026326 ENSAMEG00000024416 UBASH3B (ENSAMEG00000008362) #26 CRTAM (ENSAMEG00000008395) #27 JHY (ENSAMEG00000008408) #28 BSX (ENSAMEG00000028689) #29 ENSAMEG00000008425 ##31 CLMP (ENSAMEG00000008447) #32 GRAMD1B (ENSAMEG00000008453) #34 SCN3B (ENSAMEG00000026930) ZNF202 (ENSAMEG00000008512) OR6X1 (ENSAMEG00000019720) Mustelinae ANCESTRAL SPECIES 24 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00420000030019 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT01000000216167 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a American mink MODERN SPECIES 71 CBL (ENSNVIG00000002683) #7 MCAM (ENSNVIG00000002496) #8 RNF26 (ENSNVIG00000002481) #10 C1QTNF5 (ENSNVIG00000002462) MFRP (ENSNVIG00000002395) #11 USP2 (ENSNVIG00000002282) #12 THY1 (ENSNVIG00000002262) #13 NECTIN1 (ENSNVIG00000002195) #14 TRIM29 (ENSNVIG00000002143) #15 OAF (ENSNVIG00000002114) #16 POU2F3 (ENSNVIG00000002003) #17 TM136 (ENSNVIG00000001963) #18 ARHGEF12 (ENSNVIG00000001620) #19 GRIK4 (ENSNVIG00000001516) #20 TBCEL (ENSNVIG00000001499) #21 TECTA (ENSNVIG00000001443) #22 SC5D (ENSNVIG00000001398) #23 SORL1 (ENSNVIG00000001198) #24 UBASH3B (ENSNVIG00000001133) #26 CRTAM (ENSNVIG00000001111) #27 JHY (ENSNVIG00000001094) #28 BSX (ENSNVIG00000001086) #29 HSPA8 (ENSNVIG00000001020) #31 CLMP (ENSNVIG00000001000) #32 GRAMD1B (ENSNVIG00000000282) #34 ENSNVIG00000000264 SCN3B (ENSNVIG00000000234) ZNF202 (ENSNVIG00000000199) OR6X1 (ENSNVIG00000000192) OR6M1 (ENSNVIG00000000187) OR8D4 (ENSNVIG00000000168) Ferret MODERN SPECIES 188 ENSMPUG00000005455 RNF26 (ENSMPUG00000019736) #10 C1QTNF5 (ENSMPUG00000005459) ENSMPUG00000005466 USP2 (ENSMPUG00000005475) #12 THY1 (ENSMPUG00000005504) #13 ENSMPUG00000005548 NECTIN1 (ENSMPUG00000005556) #14 ENSMPUG00000005570 TRIM29 (ENSMPUG00000005576) #15 POU2F3 (ENSMPUG00000005584) #17 TLCD5 (ENSMPUG00000005596) #18 ARHGEF12 (ENSMPUG00000005607) #19 GRIK4 (ENSMPUG00000005636) #20 TBCEL (ENSMPUG00000005650) #21 TECTA (ENSMPUG00000005657) #22 SC5D (ENSMPUG00000005754) #23 SORL1 (ENSMPUG00000005763) #24 UBASH3B (ENSMPUG00000005787) #26 CRTAM (ENSMPUG00000005793) #27 JHY (ENSMPUG00000005798) #28 BSX (ENSMPUG00000005802) #29 ENSMPUG00000005810 ##31 CLMP (ENSMPUG00000005860) #32 GRAMD1B (ENSMPUG00000005870) #34 SCN3B (ENSMPUG00000005898) ZNF202 (ENSMPUG00000005930) OR6X1 (ENSMPUG00000019737) ENSMPUG00000019738 ENSMPUG00000019739 ENSMPUG00000019740 Canidae ANCESTRAL SPECIES 27 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00950000185617 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a.e Canis_lupus ANCESTRAL SPECIES 28 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00950000185617 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b.p ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a.e Dingo MODERN SPECIES 214 CBL (ENSCAFG00020012603) #7 MCAM (ENSCAFG00020012584) #8 RNF26 (ENSCAFG00020012581) #10 C1QTNF5 (ENSCAFG00020012580) USP2 (ENSCAFG00020012545) #12 THY1 (ENSCAFG00020012540) #13 NECTIN1 (ENSCAFG00020012521) #14 TRIM29 (ENSCAFG00020012496) #15 OAF (ENSCAFG00020012492) #16 POU2F3 (ENSCAFG00020012481) #17 TLCD5 (ENSCAFG00020012475) #18 ENSCAFG00020012441 #19 ENSCAFG00020012215 #19 GRIK4 (ENSCAFG00020011891) #20 TBCEL (ENSCAFG00020011885) #21 TECTA (ENSCAFG00020011868) #22 SC5D (ENSCAFG00020011864) #23 SORL1 (ENSCAFG00020011461) #24 ENSCAFG00020011404 UBASH3B (ENSCAFG00020011374) #26 CRTAM (ENSCAFG00020011359) #27 JHY (ENSCAFG00020011354) #28 BSX (ENSCAFG00020011350) #29 HSPA8 (ENSCAFG00020011245) #31 CLMP (ENSCAFG00020011236) #32 ENSCAFG00020011231 #34 GRAMD1B (ENSCAFG00020011227) #34 SCN3B (ENSCAFG00020011224) ZNF202 (ENSCAFG00020011218) OR6X1 (ENSCAFG00020011214) OR6M1 (ENSCAFG00020011210) Dog MODERN SPECIES 33 CBL (ENSCAFG00845000222) #7 MCAM (ENSCAFG00845014732) #8 NLRX1 (ENSCAFG00845014678) C1QTNF5 (ENSCAFG00845014649) MFRP (ENSCAFG00845014601) #11 USP2 (ENSCAFG00845014492) #12 THY1 (ENSCAFG00845014436) #13 NECTIN1 (ENSCAFG00845014377) #14 TRIM29 (ENSCAFG00845014328) #15 OAF (ENSCAFG00845014309) #16 POU2F3 (ENSCAFG00845014297) #17 TLCD5 (ENSCAFG00845014260) #18 ARHGEF12 (ENSCAFG00845013924) #19 GRIK4 (ENSCAFG00845013650) #20 TBCEL (ENSCAFG00845013557) #21 TECTA (ENSCAFG00845013517) #22 SC5D (ENSCAFG00845013494) #23 SORL1 (ENSCAFG00845013384) #24 ENSCAFG00845013346 UBASH3B (ENSCAFG00845013209) #26 CRTAM (ENSCAFG00845013047) #27 JHY (ENSCAFG00845012996) #28 BSX (ENSCAFG00845012957) #29 HSPA8 (ENSCAFG00845012887) ##31 CLMP (ENSCAFG00845012839) #32 GRAMD1B (ENSCAFG00845012564) #34 SCN3B (ENSCAFG00845012405) ZNF202 (ENSCAFG00845012321) OR6X1 (ENSCAFG00845012279) OR6M1 (ENSCAFG00845012263) OR6M2 (ENSCAFG00845012244) Red fox MODERN SPECIES 29 CCDC153 (ENSVVUG00000023120) CBL (ENSVVUG00000022400) #7 MCAM (ENSVVUG00000022350) #8 RNF26 (ENSVVUG00000022340) #10 MFRP (ENSVVUG00000022327) #11 USP2 (ENSVVUG00000022312) #12 THY1 (ENSVVUG00000022309) #13 NECTIN1 (ENSVVUG00000022294) #14 TRIM29 (ENSVVUG00000022284) #15 OAF (ENSVVUG00000022279) #16 POU2F3 (ENSVVUG00000022257) #17 TMEM136 (ENSVVUG00000022256) #18 ARHGEF12 (ENSVVUG00000020838) #19 GRIK4 (ENSVVUG00000020755) #20 TBCEL (ENSVVUG00000020748) #21 TECTA (ENSVVUG00000020722) #22 SC5D (ENSVVUG00000020720) #23 SORL1 (ENSVVUG00000020705) #24 ENSVVUG00000020696 UBASH3B (ENSVVUG00000020669) #26 CRTAM (ENSVVUG00000020662) #27 JHY (ENSVVUG00000020658) #28 BSX (ENSVVUG00000020653) #29 ENSVVUG00000020637 ##31 CLMP (ENSVVUG00000020635) #32 GRAMD1B (ENSVVUG00000020626) #34 SCN3B (ENSVVUG00000020621) ZNF202 (ENSVVUG00000020619) OR6X1 (ENSVVUG00000020617) OR6M1 (ENSVVUG00000020615) ENSVVUG00000020614 Felidae ANCESTRAL SPECIES ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101.e #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a.i ENSGT01090000260086.B.a.a.j Panthera ANCESTRAL SPECIES 26 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101.e #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00980000198875.c ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a.i Panthera_a ANCESTRAL SPECIES 29 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101.e #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00980000198875.c ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a.i ENSGT01090000260086.B.a.a.j lion MODERN SPECIES 10 MCAM (ENSPLOG00000005884) #8 RNF26 (ENSPLOG00000005943) #10 C1QTNF5 (ENSPLOG00000005959) MFRP (ENSPLOG00000006036) #11 USP2 (ENSPLOG00000006177) #12 THY1 (ENSPLOG00000006342) #13 NECTIN1 (ENSPLOG00000006382) #14 TRIM29 (ENSPLOG00000006434) #15 OAF (ENSPLOG00000006530) #16 POU2F3 (ENSPLOG00000006570) #17 TLCD5 (ENSPLOG00000006628) #18 ARHGEF12 (ENSPLOG00000006756) #19 GRIK4 (ENSPLOG00000007172) #20 ENSPLOG00000007266 TBCEL (ENSPLOG00000007366) #21 TECTA (ENSPLOG00000007404) #22 SC5D (ENSPLOG00000007547) #23 SORL1 (ENSPLOG00000007608) #24 UBASH3B (ENSPLOG00000008090) #26 CRTAM (ENSPLOG00000008145) #27 JHY (ENSPLOG00000008226) #28 BSX (ENSPLOG00000008276) #29 ENSPLOG00000008306 ##31 CLMP (ENSPLOG00000008353) #32 GRAMD1B (ENSPLOG00000008476) #34 SCN3B (ENSPLOG00000008777) ZNF202 (ENSPLOG00000008819) OR6M1 (ENSPLOG00000008893) ENSPLOG00000008906 ENSPLOG00000008917 OR8D4 (ENSPLOG00000008945) leopard MODERN SPECIES 54 CBL (ENSPPRG00000009844) #7 MCAM (ENSPPRG00000010672) #8 RNF26 (ENSPPRG00000022099) #10 C1QTNF5 (ENSPPRG00000011048) MFRP (ENSPPRG00000011877) #11 USP2 (ENSPPRG00000013010) #12 THY1 (ENSPPRG00000015977) #13 NECTIN1 (ENSPPRG00000017826) #14 TRIM29 (ENSPPRG00000019820) #15 OAF (ENSPPRG00000022567) #16 POU2F3 (ENSPPRG00000023658) #17 TLCD5 (ENSPPRG00000022930) #18 ARHGEF12 (ENSPPRG00000004218) #19 GRIK4 (ENSPPRG00000006092) #20 TBCEL (ENSPPRG00000007802) #21 TECTA (ENSPPRG00000009748) #22 ENSPPRG00000010468 #23 SORL1 (ENSPPRG00000020645) #24 UBASH3B (ENSPPRG00000024351) #26 CRTAM (ENSPPRG00000024170) #27 JHY (ENSPPRG00000023986) #28 Tiger MODERN SPECIES 351 TECTA (ENSPTIG00000012510) #22 SC5D (ENSPTIG00000011494) #23 SORL1 (ENSPTIG00000007902) #24 UBASH3B (ENSPTIG00000007290) #26 CRTAM (ENSPTIG00000006291) #27 JHY (ENSPTIG00000005817) #28 BSX (ENSPTIG00000003485) #29 ENSPTIG00000002700 ENSPTIG00000019278 ##31 CLMP (ENSPTIG00000018513) #32 GRAMD1B (ENSPTIG00000014901) #34 SCN3B (ENSPTIG00000014451) ZNF202 (ENSPTIG00000014034) OR6X1 (ENSPTIG00000000825) Cat MODERN SPECIES 241 CBL (ENSFCAG00000004737) #7 MCAM (ENSFCAG00000000977) #8 C1QTNF5 (ENSFCAG00000030303) RNF26 (ENSFCAG00000000978) #10 MFRP (ENSFCAG00000000979) #11 USP2 (ENSFCAG00000000980) #12 THY1 (ENSFCAG00000042154) #13 NECTIN1 (ENSFCAG00000005493) #14 TRIM29 (ENSFCAG00000003353) #15 OAF (ENSFCAG00000032399) #16 POU2F3 (ENSFCAG00000003355) #17 TLCD5 (ENSFCAG00000024604) #18 ARHGEF12 (ENSFCAG00000026560) #19 GRIK4 (ENSFCAG00000003358) #20 TBCEL (ENSFCAG00000013489) #21 TECTA (ENSFCAG00000013490) #22 ENSFCAG00000048683 SC5D (ENSFCAG00000034641) #23 SORL1 (ENSFCAG00000013217) #24 UBASH3B (ENSFCAG00000031213) #26 CRTAM (ENSFCAG00000001126) #27 JHY (ENSFCAG00000001129) #28 HSPA8 (ENSFCAG00000001132) #31 BSX (ENSFCAG00000006241) #29 ENSFCAG00000026351 CLMP (ENSFCAG00000001133) #32 GRAMD1B (ENSFCAG00000004317) #34 SCN3B (ENSFCAG00000000425) ZNF202 (ENSFCAG00000034748) OR6M1 (ENSFCAG00000046786) ENSFCAG00000042930 Laurasiatheria_c ANCESTRAL SPECIES 23 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564 ENSGT01040000240383.b.a.b Equus ANCESTRAL SPECIES 25 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT00390000011564.h ENSGT01040000240383.b.a.b Horse MODERN SPECIES 28 CCDC153 (ENSECAG00000001230) CBL (ENSECAG00000003448) #7 MCAM (ENSECAG00000013036) #8 RNF26 (ENSECAG00000053692) #10 MFRP (ENSECAG00000018171) USP2 (ENSECAG00000019869) #12 THY1 (ENSECAG00000009966) #13 NECTIN1 (ENSECAG00000010624) #14 TRIM29 (ENSECAG00000013651) #15 OAF (ENSECAG00000053118) #16 POU2F3 (ENSECAG00000019818) #17 TLCD5 (ENSECAG00000022595) #18 ARHGEF12 (ENSECAG00000022702) #19 GRIK4 (ENSECAG00000017491) #20 TBCEL (ENSECAG00000012963) #21 TECTA (ENSECAG00000016222) #22 SC5D (ENSECAG00000018059) #23 SORL1 (ENSECAG00000019083) #24 UBASH3B (ENSECAG00000036956) #26 ENSECAG00000031203 #27 ENSECAG00000032189 #28 ENSECAG00000036316 #29 HSPA8 (ENSECAG00000037704) #31 ENSECAG00000054464 ENSECAG00000049832 CLMP (ENSECAG00000032864) #32 UBASH3B (ENSECAG00000018634) #26 CRTAM (ENSECAG00000007708) #27 JHY (ENSECAG00000010865) #28 ENSECAG00000031197 #29 ENSECAG00000013510 ##31 Donkey MODERN SPECIES 12 ENSEASG00005003918 #13 ENSEASG00005038029 ENSEASG00005035326 ENSEASG00005017928 ENSEASG00005032922 ENSEASG00005024636 ENSEASG00005003916 #14 TRIM29 (ENSEASG00005003906) #15 OAF (ENSEASG00005003899) #16 POU2F3 (ENSEASG00005003896) #17 TLCD5 (ENSEASG00005030821) #18 ARHGEF12 (ENSEASG00005002995) #19 ENSEASG00005002823 GRIK4 (ENSEASG00005002813) #20 TBCEL (ENSEASG00005002804) #21 TECTA (ENSEASG00005002795) #22 SC5D (ENSEASG00005002790) #23 SORL1 (ENSEASG00005002655) #24 UBASH3B (ENSEASG00005002600) #26 CRTAM (ENSEASG00005002593) #27 JHY (ENSEASG00005002588) #28 BSX (ENSEASG00005002587) #29 ENSEASG00005024430 HSPA8 (ENSEASG00005002578) #31 CLMP (ENSEASG00005002573) #32 ENSEASG00005029718 #34 GRAMD1B (ENSEASG00005002562) #34 SCN3B (ENSEASG00005002556) ZNF202 (ENSEASG00005002550) OR6X1 (ENSEASG00005002546) ENSEASG00005002542 Chiroptera ANCESTRAL SPECIES 82 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00940000159961 ENSGT01050000244869.a.a.a.b.a.b.a.a Megabat MODERN SPECIES 1473 TBCEL (ENSPVAG00000011725) #21 TECTA (ENSPVAG00000011726) #22 Microchiroptera ANCESTRAL SPECIES 9 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00520000061087 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.a.a #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00940000157165 ENSGT00950000182942.b.b Microbat MODERN SPECIES 1418 GRIK4 (ENSMLUG00000015614) #20 TBCEL (ENSMLUG00000015634) #21 TECTA (ENSMLUG00000013553) #22 SC5D (ENSMLUG00000013545) #23 ENSMLUG00000026089 #24 Greater horseshoe bat MODERN SPECIES 17 GRIK4 (ENSRFEG00010014694) #20 TBCEL (ENSRFEG00010014632) #21 TECTA (ENSRFEG00010013932) #22 SC5D (ENSRFEG00010013870) #23 ENSRFEG00010013798 SORL1 (ENSRFEG00010013333) #24 ENSRFEG00010013253 ENSRFEG00010013201 UBASH3B (ENSRFEG00010012940) #26 CRTAM (ENSRFEG00010012798) #27 JHY (ENSRFEG00010012752) #28 BSX (ENSRFEG00010012685) #29 ENSRFEG00010012665 CLMP (ENSRFEG00010012631) #32 ENSRFEG00010012617 GRAMD1B (ENSRFEG00010012293) #34 SCN3B (ENSRFEG00010012233) ZNF202 (ENSRFEG00010012147) Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Suina ANCESTRAL SPECIES 5 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Pig MODERN SPECIES 17 CBL (ENSSSCG00000015115) #7 MCAM (ENSSSCG00000015116) #8 RNF26 (ENSSSCG00000015117) #10 C1QTNF5 (ENSSSCG00000054880) MFRP (ENSSSCG00000015119) #11 USP2 (ENSSSCG00000015120) #12 ENSSSCG00000032330 #13 NECTIN1 (ENSSSCG00000015125) #14 TRIM29 (ENSSSCG00000015126) #15 OAF (ENSSSCG00000036307) #16 POU2F3 (ENSSSCG00000028237) #17 TLCD5 (ENSSSCG00000037406) #18 ARHGEF12 (ENSSSCG00000015129) #19 GRIK4 (ENSSSCG00000015131) #20 TBCEL (ENSSSCG00000055670) #21 TECTA (ENSSSCG00000023728) #22 ENSSSCG00000042642 ENSSSCG00000051213 SC5D (ENSSSCG00000028517) #23 ENSSSCG00000063177 SORL1 (ENSSSCG00000015135) #24 UBASH3B (ENSSSCG00000015136) #26 CRTAM (ENSSSCG00000015137) #27 JHY (ENSSSCG00000015138) #28 BSX (ENSSSCG00000015139) #29 HSPA8 (ENSSSCG00000015140) ##31 CLMP (ENSSSCG00000022961) #32 GRAMD1B (ENSSSCG00000015144) #34 SCN3B (ENSSSCG00000053283) ZNF202 (ENSSSCG00000015145) OR6X1 (ENSSSCG00000015146) Chacoan peccary MODERN SPECIES 905 CBL (ENSCWAG00000015827) #7 MCAM (ENSCWAG00000015886) #8 RNF26 (ENSCWAG00000015911) #10 C1QTNF5 (ENSCWAG00000015923) MFRP (ENSCWAG00000015963) #11 USP2 (ENSCWAG00000016181) #12 THY1 (ENSCWAG00000016514) #13 NECTIN1 (ENSCWAG00000016567) #14 TRIM29 (ENSCWAG00000016598) #15 OAF (ENSCWAG00000016675) #16 POU2F3 (ENSCWAG00000016702) #17 TLCD5 (ENSCWAG00000016801) #18 ARHGEF12 (ENSCWAG00000016974) #19 GRIK4 (ENSCWAG00000017324) #20 TBCEL (ENSCWAG00000017466) #21 TECTA (ENSCWAG00000017507) #22 SC5D (ENSCWAG00000017753) #23 ENSCWAG00000017782 SORL1 (ENSCWAG00000017846) #24 ENSCWAG00000018478 UBASH3B (ENSCWAG00000018507) #26 CRTAM (ENSCWAG00000018535) #27 JHY (ENSCWAG00000018621) #28 BSX (ENSCWAG00000018663) #29 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Camelidae ANCESTRAL SPECIES 31 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a ENSGT01010000222320.a.a.a.b.h.b.a Arabian camel MODERN SPECIES 26 MCAM (ENSCDRG00005020930) #8 RNF26 (ENSCDRG00005021244) #10 C1QTNF5 (ENSCDRG00005021245) MFRP (ENSCDRG00005021248) #11 USP2 (ENSCDRG00005021255) #12 THY1 (ENSCDRG00005021265) #13 ENSCDRG00005021269 NECTIN1 (ENSCDRG00005021272) #14 TRIM29 (ENSCDRG00005021275) #15 OAF (ENSCDRG00005021284) #16 POU2F3 (ENSCDRG00005021288) #17 TLCD5 (ENSCDRG00005009027) #18 ARHGEF12 (ENSCDRG00005009305) #19 GRIK4 (ENSCDRG00005011077) #20 TBCEL (ENSCDRG00005011265) #21 TECTA (ENSCDRG00005011328) #22 SC5D (ENSCDRG00005011663) #23 SORL1 (ENSCDRG00005011791) #24 UBASH3B (ENSCDRG00005013145) #26 CRTAM (ENSCDRG00005013215) #27 JHY (ENSCDRG00005013357) #28 BSX (ENSCDRG00005013454) #29 ENSCDRG00005013527 ##31 CLMP (ENSCDRG00005013808) #32 GRAMD1B (ENSCDRG00005013912) #34 SCN3B (ENSCDRG00005014371) ZNF202 (ENSCDRG00005014421) OR6X1 (ENSCDRG00005014482) OR6M1 (ENSCDRG00005014513) ENSCDRG00005014538 ENSCDRG00005014550 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D Cetacea ANCESTRAL SPECIES 4 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT00390000016760.c.a.b ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT00390000011564 ENSGT01050000244869.a.a.a.b.a.b.a.a Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.B.b ENSGT01090000260086.B.a.b ENSGT01050000244869.a.a.a.b.a.b.a.a ENSGT01010000222320.a.a.a.a.a Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.B.b ENSGT01090000260086.B.a.b ENSGT01010000222320.a.a.a.a.a ENSGT01010000222320.a.b.a.a Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00390000014165.c.a.b.b.b.e.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.B.b ENSGT01090000260086.B.a.b ENSGT01010000222320.a.a.a.a.a ENSGT01010000222320.a.b.a.a Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00390000014165.c.a.b.b.b.e.a ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01090000260806 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.B.b ENSGT01090000260086.B.a.b ENSGT01010000222320.a.a.a.a.a Beluga whale MODERN SPECIES 63 MCAM (ENSDLEG00000019502) #8 RNF26 (ENSDLEG00000019499) #10 C1QTNF5 (ENSDLEG00000019497) ENSDLEG00000019484 USP2 (ENSDLEG00000019480) #12 THY1 (ENSDLEG00000019477) #13 ENSDLEG00000019474 NECTIN1 (ENSDLEG00000019467) #14 TRIM29 (ENSDLEG00000019458) #15 OAF (ENSDLEG00000019455) #16 POU2F3 (ENSDLEG00000019435) #17 TMEM136 (ENSDLEG00000019428) #18 ARHGEF12 (ENSDLEG00000019417) #19 GRIK4 (ENSDLEG00000018780) #20 TBCEL (ENSDLEG00000018724) #21 TECTA (ENSDLEG00000018672) #22 SC5D (ENSDLEG00000018663) #23 ENSDLEG00000018656 SORL1 (ENSDLEG00000018131) #24 ENSDLEG00000018057 UBASH3B (ENSDLEG00000018037) #26 CRTAM (ENSDLEG00000018008) #27 CUNH11orf63 (ENSDLEG00000017984) #28 BSX (ENSDLEG00000017973) #29 HSPA8 (ENSDLEG00000017946) #31 CLMP (ENSDLEG00000017919) #32 ENSDLEG00000017895 ENSDLEG00000017884 #34 GRAMD1B (ENSDLEG00000016933) #34 SCN3B (ENSDLEG00000016865) ZNF202 (ENSDLEG00000016852) Narwhal MODERN SPECIES 314 MCAM (ENSMMNG00015020852) #8 RNF26 (ENSMMNG00015020835) #10 C1QTNF5 (ENSMMNG00015020819) MFRP (ENSMMNG00015020764) #11 USP2 (ENSMMNG00015020681) #12 THY1 (ENSMMNG00015020644) #13 ENSMMNG00015020637 NECTIN1 (ENSMMNG00015020601) #14 TRIM29 (ENSMMNG00015020567) #15 OAF (ENSMMNG00015020541) #16 POU2F3 (ENSMMNG00015020524) #17 TLCD5 (ENSMMNG00015020500) #18 ARHGEF12 (ENSMMNG00015020154) #19 GRIK4 (ENSMMNG00015020019) #20 TBCEL (ENSMMNG00015019986) #21 TECTA (ENSMMNG00015019882) #22 SC5D (ENSMMNG00015019847) #23 ENSMMNG00015019829 SORL1 (ENSMMNG00015019380) #24 UBASH3B (ENSMMNG00015019212) #26 CRTAM (ENSMMNG00015019162) #27 JHY (ENSMMNG00015019118) #28 BSX (ENSMMNG00015019090) #29 ENSMMNG00015019028 ##31 CLMP (ENSMMNG00015018982) #32 ENSMMNG00015018945 GRAMD1B (ENSMMNG00015018401) #34 SCN3B (ENSMMNG00015018278) ZNF202 (ENSMMNG00015018240) OR6M1 (ENSMMNG00015018024) ENSMMNG00015017923 Vaquita MODERN SPECIES 19 MCAM (ENSPSNG00000020982) #8 RNF26 (ENSPSNG00000020952) #10 C1QTNF5 (ENSPSNG00000020933) MFRP (ENSPSNG00000020811) #11 USP2 (ENSPSNG00000020722) #12 THY1 (ENSPSNG00000020675) #13 ENSPSNG00000020660 NECTIN1 (ENSPSNG00000020613) #14 TRIM29 (ENSPSNG00000020568) #15 OAF (ENSPSNG00000020531) #16 POU2F3 (ENSPSNG00000020450) #17 TLCD5 (ENSPSNG00000020407) #18 ARHGEF12 (ENSPSNG00000020278) #19 GRIK4 (ENSPSNG00000020143) #20 TBCEL (ENSPSNG00000020096) #21 TECTA (ENSPSNG00000019839) #22 SC5D (ENSPSNG00000019783) #23 ENSPSNG00000019739 SORL1 (ENSPSNG00000018829) #24 UBASH3B (ENSPSNG00000018698) #26 CRTAM (ENSPSNG00000018597) #27 JHY (ENSPSNG00000018565) #28 BSX (ENSPSNG00000018510) #29 ENSPSNG00000018377 ##31 CLMP (ENSPSNG00000018310) #32 ENSPSNG00000018248 GRAMD1B (ENSPSNG00000017137) #34 SCN3B (ENSPSNG00000016990) ZNF202 (ENSPSNG00000016950) OR6M1 (ENSPSNG00000016548) ENSPSNG00000016422 Dolphin MODERN SPECIES 1005 GRIK4 (ENSTTRG00000012094) #20 TBCEL (ENSTTRG00000012104) #21 TECTA (ENSTTRG00000012107) #22 Sperm whale MODERN SPECIES 7 CBL (ENSPCTG00005008867) #7 MCAM (ENSPCTG00005008833) #8 RNF26 (ENSPCTG00005008815) #10 C1QTNF5 (ENSPCTG00005008788) MFRP (ENSPCTG00005008560) #11 USP2 (ENSPCTG00005021496) #12 THY1 (ENSPCTG00005021447) #13 NECTIN1 (ENSPCTG00005021410) #14 TRIM29 (ENSPCTG00005021371) #15 OAF (ENSPCTG00005021343) #16 POU2F3 (ENSPCTG00005021300) #17 ENSPCTG00005021262 #18 ARHGEF12 (ENSPCTG00005021172) #19 GRIK4 (ENSPCTG00005021076) #20 TBCEL (ENSPCTG00005021053) #21 TECTA (ENSPCTG00005020859) #22 SC5D (ENSPCTG00005020828) #23 SORL1 (ENSPCTG00005019970) #24 UBASH3B (ENSPCTG00005019859) #26 CRTAM (ENSPCTG00005019739) #27 JHY (ENSPCTG00005019709) #28 BSX (ENSPCTG00005019664) #29 ENSPCTG00005019643 ENSPCTG00005019601 ##31 CLMP (ENSPCTG00005019556) #32 ENSPCTG00005019502 GRAMD1B (ENSPCTG00005018359) #34 SCN3B (ENSPCTG00005018207) OR6X1 (ENSPCTG00005017783) ZNF202 (ENSPCTG00005017733) ENSPCTG00005017550 Blue whale MODERN SPECIES 19 ENSBMSG00010011711 CBL (ENSBMSG00010011688) #7 MCAM (ENSBMSG00010011650) #8 RNF26 (ENSBMSG00010011642) #10 C1QTNF5 (ENSBMSG00010011630) MFRP (ENSBMSG00010011603) #11 USP2 (ENSBMSG00010011532) #12 THY1 (ENSBMSG00010011499) #13 NECTIN1 (ENSBMSG00010011473) #14 TRIM29 (ENSBMSG00010011423) #15 POU2F3 (ENSBMSG00010011341) #17 TLCD5 (ENSBMSG00010011237) #18 ARHGEF12 (ENSBMSG00010010986) #19 GRIK4 (ENSBMSG00010010793) #20 TBCEL (ENSBMSG00010010766) #21 TECTA (ENSBMSG00010010715) #22 SC5D (ENSBMSG00010010680) #23 ENSBMSG00010010666 SORL1 (ENSBMSG00010010445) #24 UBASH3B (ENSBMSG00010010294) #26 CRTAM (ENSBMSG00010010270) #27 JHY (ENSBMSG00010010245) #28 BSX (ENSBMSG00010010230) #29 HSPA8 (ENSBMSG00010010196) #31 CLMP (ENSBMSG00010010161) #32 ENSBMSG00010010131 GRAMD1B (ENSBMSG00010010049) #34 SCN3B (ENSBMSG00010010008) ZNF202 (ENSBMSG00010009992) TMEM225 (ENSBMSG00010009917) ENSBMSG00010009897 Pecora ANCESTRAL SPECIES 7 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a Percora_a ANCESTRAL SPECIES 6 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a Bovidae ANCESTRAL SPECIES 6 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a Bovinae ANCESTRAL SPECIES 21 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a Bos ANCESTRAL SPECIES 20 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00390000016654.c.b ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a Bos_b ANCESTRAL SPECIES 19 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00390000016654.c.b ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00960000189557 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a Cow MODERN SPECIES 6 MCAM (ENSBTAG00000006835) #8 RNF26 (ENSBTAG00000012562) #10 C1QTNF5 (ENSBTAG00000027766) MFRP (ENSBTAG00000009748) #11 USP2 (ENSBTAG00000009749) #12 THY1 (ENSBTAG00000019627) #13 NECTIN1 (ENSBTAG00000015939) #14 TRIM29 (ENSBTAG00000009419) #15 OAF (ENSBTAG00000021338) #16 POU2F3 (ENSBTAG00000021340) #17 TLCD5 (ENSBTAG00000021342) #18 ARHGEF12 (ENSBTAG00000021343) #19 GRIK4 (ENSBTAG00000017146) #20 ENSBTAG00000040051 TBCEL (ENSBTAG00000018213) #21 TECTA (ENSBTAG00000004456) #22 SC5D (ENSBTAG00000019246) #23 ENSBTAG00000051189 SORL1 (ENSBTAG00000014611) #24 ENSBTAG00000053620 UBASH3B (ENSBTAG00000000842) #26 CRTAM (ENSBTAG00000005193) #27 JHY (ENSBTAG00000013989) #28 BSX (ENSBTAG00000013994) #29 HSPA8 (ENSBTAG00000013162) ##31 CLMP (ENSBTAG00000020046) #32 GRAMD1B (ENSBTAG00000001410) #34 SCN3B (ENSBTAG00000016768) ZNF202 (ENSBTAG00000016684) ENSBTAG00000050079 SAAL1 (ENSBTAG00000008804) Hybrid Bos Indicus MODERN SPECIES 6 RNF26 (ENSBIXG00005028424) #10 ENSBIXG00005028447 MFRP (ENSBIXG00005028475) #11 USP2 (ENSBIXG00005028585) #12 ENSBIXG00005004947 #13 NECTIN1 (ENSBIXG00005028659) #14 TRIM29 (ENSBIXG00005028730) #15 OAF (ENSBIXG00005028761) #16 POU2F3 (ENSBIXG00005028778) #17 TLCD5 (ENSBIXG00005028810) #18 ARHGEF12 (ENSBIXG00005028875) #19 GRIK4 (ENSBIXG00005028909) #20 ENSBIXG00005028935 ENSBIXG00005002177 TBCEL (ENSBIXG00005028967) #21 TECTA (ENSBIXG00005005131) #22 SC5D (ENSBIXG00005005176) #23 ENSBIXG00005005191 SORL1 (ENSBIXG00005005228) #24 UBASH3B (ENSBIXG00005011282) #26 CRTAM (ENSBIXG00005011302) #27 JHY (ENSBIXG00005011352) #28 BSX (ENSBIXG00005011376) #29 ENSBIXG00005011538 ##31 CLMP (ENSBIXG00005011593) #32 GRAMD1B (ENSBIXG00005011762) #34 SCN3B (ENSBIXG00005011870) ZNF202 (ENSBIXG00005001192) ENSBIXG00005001194 ENSBIXG00005011988 ENSBIXG00005011994 Bos_a ANCESTRAL SPECIES 15 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.a.o.a.a.a.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a ENSGT00940000160684 Wild yak MODERN SPECIES 884 MCAM (ENSBMUG00000010212) #8 RNF26 (ENSBMUG00000010055) #10 C1QTNF5 (ENSBMUG00000010047) MFRP (ENSBMUG00000010026) #11 USP2 (ENSBMUG00000009990) #12 THY1 (ENSBMUG00000009971) #13 NECTIN1 (ENSBMUG00000009949) #14 TRIM29 (ENSBMUG00000009933) #15 OAF (ENSBMUG00000009919) #16 POU2F3 (ENSBMUG00000009903) #17 TLCD5 (ENSBMUG00000009897) #18 ARHGEF12 (ENSBMUG00000009803) #19 GRIK4 (ENSBMUG00000009668) #20 ENSBMUG00000009640 TBCEL (ENSBMUG00000009635) #21 TECTA (ENSBMUG00000009605) #22 SC5D (ENSBMUG00000009572) #23 ENSBMUG00000009562 SORL1 (ENSBMUG00000009532) #24 Domestic yak MODERN SPECIES 4 MCAM (ENSBGRG00000015317) #8 RNF26 (ENSBGRG00000015290) #10 C1QTNF5 (ENSBGRG00000015232) MFRP (ENSBGRG00000014859) #11 USP2 (ENSBGRG00000014287) #12 THY1 (ENSBGRG00000014203) #13 NECTIN1 (ENSBGRG00000013920) #14 TRIM29 (ENSBGRG00000013713) #15 OAF (ENSBGRG00000013639) #16 POU2F3 (ENSBGRG00000013401) #17 TLCD5 (ENSBGRG00000013334) #18 ARHGEF12 (ENSBGRG00000012502) #19 GRIK4 (ENSBGRG00000012244) #20 ENSBGRG00000012217 TBCEL (ENSBGRG00000012161) #21 TECTA (ENSBGRG00000012059) #22 SC5D (ENSBGRG00000011853) #23 SORL1 (ENSBGRG00000011099) #24 ENSBGRG00000011053 UBASH3B (ENSBGRG00000010659) #26 CRTAM (ENSBGRG00000015363) #27 JHY (ENSBGRG00000015236) #28 ENSBGRG00000015174 BSX (ENSBGRG00000015127) #29 ENSBGRG00000015071 HSPA8 (ENSBGRG00000014719) #31 CLMP (ENSBGRG00000014616) #32 GRAMD1B (ENSBGRG00000013095) #34 SCN3B (ENSBGRG00000012965) ZNF202 (ENSBGRG00000012911) ENSBGRG00000012876 American bison MODERN SPECIES 3365 RNF26 (ENSBBBG00000019308) #10 C1QTNF5 (ENSBBBG00000005005) MFRP (ENSBBBG00000019292) #11 USP2 (ENSBBBG00000004970) #12 THY1 (ENSBBBG00000004930) #13 NECTIN1 (ENSBBBG00000019134) #14 ENSBBBG00000007098 ENSBBBG00000019100 OAF (ENSBBBG00000009157) #16 POU2F3 (ENSBBBG00000004883) #17 TLCD5 (ENSBBBG00000009156) #18 ARHGEF12 (ENSBBBG00000019004) #19 GRIK4 (ENSBBBG00000018764) #20 ENSBBBG00000018675 TBCEL (ENSBBBG00000018659) #21 TECTA (ENSBBBG00000018626) #22 SC5D (ENSBBBG00000018532) #23 ENSBBBG00000018510 SORL1 (ENSBBBG00000018493) #24 ENSBBBG00000018379 UBASH3B (ENSBBBG00000018323) #26 CRTAM (ENSBBBG00000018292) #27 JHY (ENSBBBG00000018276) #28 BSX (ENSBBBG00000018188) #29 ENSBBBG00000018029 ##31 CLMP (ENSBBBG00000016837) #32 GRAMD1B (ENSBBBG00000000719) #34 SCN3B (ENSBBBG00000016043) ZNF202 (ENSBBBG00000016005) SAAL1 (ENSBBBG00000015979) TPH1 (ENSBBBG00000007903) Caprinae ANCESTRAL SPECIES 6 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT00390000004737.b.b ENSGT00950000182885.A.a ENSGT00940000160684 ENSGT00940000156912 Goat MODERN SPECIES 6 CBL (ENSCHIG00000008131) #7 MCAM (ENSCHIG00000013559) #8 C1QTNF5 (ENSCHIG00000014716) MFRP (ENSCHIG00000019590) #11 USP2 (ENSCHIG00000002460) #12 THY1 (ENSCHIG00000024336) #13 NECTIN1 (ENSCHIG00000026297) #14 TRIM29 (ENSCHIG00000025539) #15 OAF (ENSCHIG00000009782) #16 POU2F3 (ENSCHIG00000017342) #17 TLCD5 (ENSCHIG00000020483) #18 ARHGEF12 (ENSCHIG00000026831) #19 GRIK4 (ENSCHIG00000008888) #20 ENSCHIG00000026160 TBCEL (ENSCHIG00000018085) #21 TECTA (ENSCHIG00000014187) #22 SC5D (ENSCHIG00000008144) #23 SORL1 (ENSCHIG00000020653) #24 UBASH3B (ENSCHIG00000027002) #26 CRTAM (ENSCHIG00000016236) #27 ENSCHIG00000017759 JHY (ENSCHIG00000006072) #28 BSX (ENSCHIG00000002885) #29 HSPA8 (ENSCHIG00000017000) ##31 CLMP (ENSCHIG00000010482) #32 GRAMD1B (ENSCHIG00000012464) #34 SCN3B (ENSCHIG00000006052) ZNF202 (ENSCHIG00000026799) SAAL1 (ENSCHIG00000014782) TPH1 (ENSCHIG00000022168) SERGEF (ENSCHIG00000016321) Rambouillet Sheep MODERN SPECIES 6 CBL (ENSOARG00020014821) #7 MCAM (ENSOARG00020014906) #8 RNF26 (ENSOARG00020014994) #10 C1QTNF5 (ENSOARG00020015019) MFRP (ENSOARG00020015077) #11 USP2 (ENSOARG00020015401) #12 THY1 (ENSOARG00020016169) #13 NECTIN1 (ENSOARG00020016261) #14 TRIM29 (ENSOARG00020016323) #15 OAF (ENSOARG00020016492) #16 POU2F3 (ENSOARG00020016577) #17 TLCD5 (ENSOARG00020016719) #18 ARHGEF12 (ENSOARG00020016798) #19 GRIK4 (ENSOARG00020018709) #20 TBCEL (ENSOARG00020018884) #21 TECTA (ENSOARG00020018982) #22 SC5D (ENSOARG00020019328) #23 SORL1 (ENSOARG00020019410) #24 ENSOARG00020019983 ENSOARG00020020082 UBASH3B (ENSOARG00020020117) #26 CRTAM (ENSOARG00020020211) #27 JHY (ENSOARG00020020294) #28 BSX (ENSOARG00020020411) #29 HSPA8 (ENSOARG00020020443) #31 CLMP (ENSOARG00020020617) #32 GRAMD1B (ENSOARG00020020792) #34 SCN3B (ENSOARG00020022761) ZNF202 (ENSOARG00020022786) SAAL1 (ENSOARG00020022824) TPH1 (ENSOARG00020022961) Siberian musk deer MODERN SPECIES 1170 MCAM (ENSMMSG00000015525) #8 RNF26 (ENSMMSG00000015517) #10 C1QTNF5 (ENSMMSG00000015493) MFRP (ENSMMSG00000015373) #11 USP2 (ENSMMSG00000015190) #12 THY1 (ENSMMSG00000015155) #13 NECTIN1 (ENSMMSG00000015129) #14 TRIM29 (ENSMMSG00000015084) #15 OAF (ENSMMSG00000015066) #16 POU2F3 (ENSMMSG00000015001) #17 TLCD5 (ENSMMSG00000020817) #18 ARHGEF12 (ENSMMSG00000020588) #19 GRIK4 (ENSMMSG00000020477) #20 ENSMMSG00000020453 TBCEL (ENSMMSG00000020395) #21 TECTA (ENSMMSG00000020368) #22 SC5D (ENSMMSG00000020336) #23 SORL1 (ENSMMSG00000019969) #24 ENSMMSG00000019895 UBASH3B (ENSMMSG00000019850) #26 ENSMMSG00000019827 CRTAM (ENSMMSG00000019788) #27 JHY (ENSMMSG00000019753) #28 BSX (ENSMMSG00000019731) #29 ENSMMSG00000019680 ##31 CLMP (ENSMMSG00000019631) #32 GRAMD1B (ENSMMSG00000016337) #34 SCN3B (ENSMMSG00000016197) ZNF202 (ENSMMSG00000016172) ENSMMSG00000016147 SAAL1 (ENSMMSG00000016101) Yarkand deer MODERN SPECIES CBL (ENSCHYG00000007532) #7 MCAM (ENSCHYG00000007589) #8 RNF26 (ENSCHYG00000007679) #10 C1QTNF5 (ENSCHYG00000007870) MFRP (ENSCHYG00000007705) #11 USP2 (ENSCHYG00000007946) #12 THY1 (ENSCHYG00000008269) #13 NECTIN1 (ENSCHYG00000008304) #14 TRIM29 (ENSCHYG00000008335) #15 OAF (ENSCHYG00000008424) #16 POU2F3 (ENSCHYG00000008441) #17 TLCD5 (ENSCHYG00000008461) #18 ARHGEF12 (ENSCHYG00000008536) #19 GRIK4 (ENSCHYG00000009278) #20 TBCEL (ENSCHYG00000009677) #21 TECTA (ENSCHYG00000009743) #22 SC5D (ENSCHYG00000010091) #23 SORL1 (ENSCHYG00000010203) #24 UBASH3B (ENSCHYG00000010800) #26 CRTAM (ENSCHYG00000010922) #27 JHY (ENSCHYG00000011012) #28 BSX (ENSCHYG00000011105) #29 ENSCHYG00000011140 HSPA8 (ENSCHYG00000011182) #31 CLMP (ENSCHYG00000011450) #32 GRAMD1B (ENSCHYG00000011570) #34 SCN3B (ENSCHYG00000012415) ZNF202 (ENSCHYG00000012502) ENSCHYG00000012579 SAAL1 (ENSCHYG00000012719) TPH1 (ENSCHYG00000012793) Atlantogenata ANCESTRAL SPECIES 54 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a ENSGT01040000240383.b.a.b Afrotheria ANCESTRAL SPECIES 51 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000165588 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Afrotheria_a ANCESTRAL SPECIES 46 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000165588 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00950000183206.b.c.b ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B.b ENSGT01090000260086.B.a.a Elephant MODERN SPECIES 464 MCAM (ENSLAFG00000007173) #8 RNF26 (ENSLAFG00000000879) #10 C1QTNF5 (ENSLAFG00000020705) ENSLAFG00000000881 USP2 (ENSLAFG00000006018) #12 THY1 (ENSLAFG00000016895) #13 NECTIN1 (ENSLAFG00000028118) #14 TRIM29 (ENSLAFG00000022667) #15 OAF (ENSLAFG00000028646) #16 POU2F3 (ENSLAFG00000007476) #17 TLCD5 (ENSLAFG00000012330) #18 ENSLAFG00000032106 ARHGEF12 (ENSLAFG00000013288) #19 GRIK4 (ENSLAFG00000017260) #20 TBCEL (ENSLAFG00000017879) #21 TECTA (ENSLAFG00000022861) #22 SC5D (ENSLAFG00000011651) #23 SORL1 (ENSLAFG00000009079) #24 UBASH3B (ENSLAFG00000010479) #26 CRTAM (ENSLAFG00000021697) #27 ENSLAFG00000014733 #28 BSX (ENSLAFG00000014738) #29 ENSLAFG00000030312 ##31 CLMP (ENSLAFG00000001727) #32 GRAMD1B (ENSLAFG00000000362) #34 SCN3B (ENSLAFG00000000365) ZNF202 (ENSLAFG00000008599) ENSLAFG00000021715 ENSLAFG00000021746 ENSLAFG00000021890 OR6M1 (ENSLAFG00000015038) Tenrec MODERN SPECIES 1218 TECTA (ENSETEG00000003781) #22 Xenarthra ANCESTRAL SPECIES 48 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b.d ##31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.B.a.a ENSGT00390000011564 ENSGT00940000163057 ENSGT01090000260086.A.c.a.a Armadillo MODERN SPECIES 1656 TRIM29 (ENSDNOG00000012707) #15 OAF (ENSDNOG00000043139) #16 ENSDNOG00000002152 #17 TLCD5 (ENSDNOG00000049378) #18 ENSDNOG00000047963 ARHGEF12 (ENSDNOG00000000591) #19 GRIK4 (ENSDNOG00000030953) #20 TBCEL (ENSDNOG00000025797) #21 TECTA (ENSDNOG00000017684) #22 SC5D (ENSDNOG00000017691) #23 SORL1 (ENSDNOG00000012955) #24 UBASH3B (ENSDNOG00000012742) #26 CRTAM (ENSDNOG00000032151) #27 JHY (ENSDNOG00000007369) #28 BSX (ENSDNOG00000007244) #29 ENSDNOG00000039062 ##31 CLMP (ENSDNOG00000037200) #32 ENSDNOG00000036089 GRAMD1B (ENSDNOG00000018415) #34 SCN3B (ENSDNOG00000018419) ZNF202 (ENSDNOG00000031856) ENSDNOG00000003354 ENSDNOG00000000468 ENSDNOG00000002422 Sloth MODERN SPECIES 998 TECTA (ENSCHOG00000012091) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B ENSGT01040000240383.b.a.b ENSGT00940000163057 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01090000260086.B ENSGT01040000240383.b.a.b ENSGT00940000163057 Diprotodontia ANCESTRAL SPECIES 40 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01040000240383.b.a.b ENSGT01090000260086.A.c.a.a.a.b ENSGT01050000244869.a.a.b ENSGT01050000244869.a.a.a.a Diprotodontia_a ANCESTRAL SPECIES 39 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000161189 ENSGT01090000260086.D ENSGT01040000240383.b.a.b ENSGT01090000260086.A.c.a.a.a.b ENSGT01050000244869.a.a.b ENSGT01050000244869.a.a.a.a koala MODERN SPECIES 18 CBL (ENSPCIG00000022527) #7 MCAM (ENSPCIG00000022511) #8 RNF26 (ENSPCIG00000022507) #10 C1QTNF5 (ENSPCIG00000022506) MFRP (ENSPCIG00000022502) #11 USP2 (ENSPCIG00000022496) #12 THY1 (ENSPCIG00000022493) #13 NECTIN1 (ENSPCIG00000031350) #14 TRIM29 (ENSPCIG00000030589) #15 OAF (ENSPCIG00000018076) #16 POU2F3 (ENSPCIG00000018077) #17 TLCD5 (ENSPCIG00000018079) #18 ARHGEF12 (ENSPCIG00000015198) #19 GRIK4 (ENSPCIG00000006247) #20 TBCEL (ENSPCIG00000006246) #21 TECTA (ENSPCIG00000006191) #22 SC5D (ENSPCIG00000006181) #23 ENSPCIG00000006177 ENSPCIG00000006164 UBASH3B (ENSPCIG00000002857) #26 CRTAM (ENSPCIG00000002839) #27 JHY (ENSPCIG00000003894) #28 BSX (ENSPCIG00000019710) #29 CLMP (ENSPCIG00000036965) #32 GRAMD1B (ENSPCIG00000002709) #34 SCN3B (ENSPCIG00000002658) ZNF202 (ENSPCIG00000031118) OR6X1 (ENSPCIG00000028224) ENSPCIG00000035978 OR6T1 (ENSPCIG00000014891) OR10S1 (ENSPCIG00000014893) Common wonbat MODERN SPECIES 1052 NHERF4 (ENSVURG00010003654) CBL (ENSVURG00010003598) #7 MCAM (ENSVURG00010003552) #8 RNF26 (ENSVURG00010003541) #10 C1QTNF5 (ENSVURG00010003536) USP2 (ENSVURG00010003460) #12 THY1 (ENSVURG00010003441) #13 NECTIN1 (ENSVURG00010003411) #14 TRIM29 (ENSVURG00010003363) #15 OAF (ENSVURG00010003349) #16 POU2F3 (ENSVURG00010003340) #17 TLCD5 (ENSVURG00010003305) #18 ARHGEF12 (ENSVURG00010003131) #19 GRIK4 (ENSVURG00010003011) #20 TBCEL (ENSVURG00010002935) #21 TECTA (ENSVURG00010002863) #22 SC5D (ENSVURG00010002831) #23 ENSVURG00010002811 SORL1 (ENSVURG00010002765) #24 UBASH3B (ENSVURG00010002649) #26 CRTAM (ENSVURG00010002637) #27 ENSVURG00010002631 #28 BSX (ENSVURG00010002607) #29 CLMP (ENSVURG00010002582) #32 GRAMD1B (ENSVURG00010002248) #34 SCN3B (ENSVURG00010002195) ENSVURG00010002191 ENSVURG00010002184 OR6X1 (ENSVURG00010002173) OR8D4 (ENSVURG00010002161) ENSVURG00010002154 Tasmanian devil MODERN SPECIES 2 CCDC153 (ENSSHAG00000009069) CBL (ENSSHAG00000008028) #7 MCAM (ENSSHAG00000007967) #8 RNF26 (ENSSHAG00000025818) #10 ENSSHAG00000007088 USP2 (ENSSHAG00000006515) #12 THY1 (ENSSHAG00000027056) #13 NECTIN1 (ENSSHAG00000018845) #14 TRIM29 (ENSSHAG00000018427) #15 OAF (ENSSHAG00000024042) #16 POU2F3 (ENSSHAG00000018198) #17 TLCD5 (ENSSHAG00000024900) #18 ARHGEF12 (ENSSHAG00000017964) #19 GRIK4 (ENSSHAG00000017028) #20 TBCEL (ENSSHAG00000024998) #21 TECTA (ENSSHAG00000016516) #22 ENSSHAG00000029985 #23 SORL1 (ENSSHAG00000015179) #24 UBASH3B (ENSSHAG00000007113) #26 CRTAM (ENSSHAG00000006510) #27 JHY (ENSSHAG00000004410) #28 BSX (ENSSHAG00000022673) #29 HSPA8 (ENSSHAG00000007499) #31 CLMP (ENSSHAG00000022410) #32 ENSSHAG00000025561 #34 GRAMD1B (ENSSHAG00000010353) #34 SCN3B (ENSSHAG00000020707) ZNF202 (ENSSHAG00000020474) OR6X1 (ENSSHAG00000009093) OR6M1 (ENSSHAG00000001590) ENSSHAG00000008761 Opossum MODERN SPECIES 3 CBL (ENSMODG00000013232) #7 MCAM (ENSMODG00000013229) #8 RNF26 (ENSMODG00000013217) #10 C1QTNF5 (ENSMODG00000013215) ENSMODG00000044117 USP2 (ENSMODG00000013213) #12 THY1 (ENSMODG00000013188) #13 NECTIN1 (ENSMODG00000013186) #14 TRIM29 (ENSMODG00000013171) #15 OAF (ENSMODG00000044397) #16 POU2F3 (ENSMODG00000013141) #17 TLCD5 (ENSMODG00000013138) #18 ARHGEF12 (ENSMODG00000013134) #19 GRIK4 (ENSMODG00000013079) #20 TBCEL (ENSMODG00000013041) #21 TECTA (ENSMODG00000013037) #22 ENSMODG00000029150 SC5D (ENSMODG00000013028) #23 SORL1 (ENSMODG00000013024) #24 ENSMODG00000024527 UBASH3B (ENSMODG00000012999) #26 CRTAM (ENSMODG00000012990) #27 JHY (ENSMODG00000012966) #28 BSX (ENSMODG00000012962) #29 HSPA8 (ENSMODG00000012958) #31 CLMP (ENSMODG00000012950) #32 GRAMD1B (ENSMODG00000012947) #34 SCN3B (ENSMODG00000012935) ZNF202 (ENSMODG00000012927) OR6X1 (ENSMODG00000012908) OR8D4 (ENSMODG00000012892) Platypus MODERN SPECIES 2 CBL (ENSOANG00000039233) #7 ENSOANG00000043525 #8 RNF26 (ENSOANG00000047434) #10 C1QTNF5 (ENSOANG00000045267) MFRP (ENSOANG00000039682) #11 USP2 (ENSOANG00000004771) #12 THY1 (ENSOANG00000002126) #13 NECTIN1 (ENSOANG00000015255) #14 TRIM29 (ENSOANG00000047154) #15 ENSOANG00000050807 #16 POU2F3 (ENSOANG00000007198) #17 ENSOANG00000039823 #18 ARHGEF12 (ENSOANG00000006268) #19 GRIK4 (ENSOANG00000006269) #20 TBCEL (ENSOANG00000048928) #21 TECTA (ENSOANG00000006272) #22 SC5D (ENSOANG00000005098) #23 SORL1 (ENSOANG00000001772) #24 ENSOANG00000036134 ENSOANG00000051318 ENSOANG00000012151 ENSOANG00000047565 ENSOANG00000043094 ENSOANG00000013077 ENSOANG00000001529 ENSOANG00000000151 PRSS27 (ENSOANG00000036919) ENSOANG00000003896 ENSOANG00000047321 PRSS33 (ENSOANG00000000553) ENSOANG00000050464 Sauria ANCESTRAL SPECIES 31 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Archelosauria ANCESTRAL SPECIES 31 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Archosauria ANCESTRAL SPECIES 26 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Aves ANCESTRAL SPECIES 32 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Neognathae ANCESTRAL SPECIES 29 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Neognathae_b ANCESTRAL SPECIES 29 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b.i #21 ENSGT00530000063405.b.j #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00960000189385 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 Neognathae_c ANCESTRAL SPECIES 32 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b.i #21 ENSGT00530000063405.b.j #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Golden eagle MODERN SPECIES 24 MCAM (ENSACCG00020005859) #8 RNF26 (ENSACCG00020005886) #10 C1QTNF5 (ENSACCG00020005898) MFRP (ENSACCG00020005937) #11 USP2 (ENSACCG00020005974) #12 THY1 (ENSACCG00020005996) #13 NECTIN1 (ENSACCG00020006008) #14 TRIM29 (ENSACCG00020006042) #15 OAF (ENSACCG00020006074) #16 POU2F3 (ENSACCG00020006100) #17 ENSACCG00020006126 #18 ENSACCG00020006138 #18 ARHGEF12 (ENSACCG00020006191) #19 GRIK4 (ENSACCG00020006268) #20 TBCEL (ENSACCG00020006327) #21 TECTA (ENSACCG00020006351) #22 SC5D (ENSACCG00020006366) #23 SORL1 (ENSACCG00020006710) #24 ENSACCG00020007190 UBASH3B (ENSACCG00020007227) #26 CRTAM (ENSACCG00020007255) #27 JHY (ENSACCG00020007286) #28 BSX (ENSACCG00020007303) #29 HSPA8 (ENSACCG00020007315) #31 CLMP (ENSACCG00020007347) #32 ENSACCG00020007358 #34 ENSACCG00020007394 #34 SCN3B (ENSACCG00020007421) ATP12A (ENSACCG00020007447) B3GAT1 (ENSACCG00020007516) ENSACCG00020007537 Kakapo MODERN SPECIES 7 RNF26 (ENSSHBG00005011333) #10 C1QTNF5 (ENSSHBG00005011349) MFRP (ENSSHBG00005011367) #11 ENSSHBG00005011430 THY1 (ENSSHBG00005011678) #13 NECTIN1 (ENSSHBG00005011697) #14 TRIM29 (ENSSHBG00005011725) #15 OAF (ENSSHBG00005011764) #16 POU2F3 (ENSSHBG00005011782) #17 ENSSHBG00005011819 #18 ENSSHBG00005011843 #18 ARHGEF12 (ENSSHBG00005011872) #19 GRIK4 (ENSSHBG00005011908) #20 ENSSHBG00005011930 #21 ENSSHBG00005011944 #21 TECTA (ENSSHBG00005011994) #22 SC5D (ENSSHBG00005012105) #23 SORL1 (ENSSHBG00005012547) #24 UBASH3B (ENSSHBG00005016614) #26 CRTAM (ENSSHBG00005016621) #27 BSX (ENSSHBG00005016628) #29 HSPA8 (ENSSHBG00005016629) #31 CLMP (ENSSHBG00005016644) #32 GRAMD1B (ENSSHBG00005016697) #34 SCN3B (ENSSHBG00005017191) ATP12A (ENSSHBG00005017293) TIRAP (ENSSHBG00005019523) DCPS (ENSSHBG00005019525) ST3GAL4 (ENSSHBG00005019527) KIRREL3 (ENSSHBG00005019532) ETS1 (ENSSHBG00005019539) Passeriformes ANCESTRAL SPECIES 28 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b.i #21 ENSGT00530000063405.b.j #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00960000189385 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 Great tit MODERN SPECIES 16 CBL (ENSPMJG00000008613) #7 MCAM (ENSPMJG00000008615) #8 RNF26 (ENSPMJG00000008616) #10 C1QTNF5 (ENSPMJG00000008617) USP2 (ENSPMJG00000008618) #12 THY1 (ENSPMJG00000008619) #13 NECTIN1 (ENSPMJG00000008621) #14 TRIM29 (ENSPMJG00000008626) #15 OAF (ENSPMJG00000008628) #16 POU2F3 (ENSPMJG00000008629) #17 ENSPMJG00000008630 #18 ENSPMJG00000008631 #18 ARHGEF12 (ENSPMJG00000008632) #19 GRIK4 (ENSPMJG00000008633) #20 TBCEL (ENSPMJG00000008634) #21 TECTA (ENSPMJG00000008635) #22 ENSPMJG00000008638 SC5D (ENSPMJG00000008639) #23 ENSPMJG00000008640 ENSPMJG00000008641 SORL1 (ENSPMJG00000008642) #24 UBASH3B (ENSPMJG00000008650) #26 CRTAM (ENSPMJG00000008651) #27 ENSPMJG00000008653 #28 BSX (ENSPMJG00000008654) #29 HSPA8 (ENSPMJG00000008655) #31 CLMP (ENSPMJG00000008659) #32 ENSPMJG00000008664 #34 ENSPMJG00000008666 #34 ENSPMJG00000008668 ATP12A (ENSPMJG00000008671) Passeriformes_d ANCESTRAL SPECIES 29 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b.i #21 ENSGT00530000063405.b.j #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00960000189385 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 Passeriformes_g ANCESTRAL SPECIES 22 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b.i #21 ENSGT00530000063405.b.j #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Passeroidea ANCESTRAL SPECIES 22 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b.j #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Common canary MODERN SPECIES 55 NLRX1 (ENSSCAG00000008011) CBL (ENSSCAG00000008019) #7 MCAM (ENSSCAG00000008034) #8 C1QTNF5 (ENSSCAG00000008044) ENSSCAG00000008049 THY1 (ENSSCAG00000008051) #13 NECTIN1 (ENSSCAG00000008062) #14 TRIM29 (ENSSCAG00000008069) #15 OAF (ENSSCAG00000008080) #16 POU2F3 (ENSSCAG00000008092) #17 ENSSCAG00000008104 #18 ENSSCAG00000008112 #18 ARHGEF12 (ENSSCAG00000008121) #19 GRIK4 (ENSSCAG00000008163) #20 TBCEL (ENSSCAG00000008181) #21 TECTA (ENSSCAG00000008199) #22 SC5D (ENSSCAG00000008238) #23 SORL1 (ENSSCAG00000008343) #24 ENSSCAG00000008502 UBASH3B (ENSSCAG00000008504) #26 ENSSCAG00000008509 #27 Zebra finch MODERN SPECIES 17 RNF26 (ENSTGUG00000029048) #10 C1QTNF5 (ENSTGUG00000000385) MFRP (ENSTGUG00000000387) #11 USP2 (ENSTGUG00000000390) #12 THY1 (ENSTGUG00000000398) #13 NECTIN1 (ENSTGUG00000020436) #14 TRIM29 (ENSTGUG00000000405) #15 OAF (ENSTGUG00000000407) #16 ENSTGUG00000028648 POU2F3 (ENSTGUG00000000410) #17 ENSTGUG00000013890 #18 ENSTGUG00000029185 #18 ARHGEF12 (ENSTGUG00000000421) #19 GRIK4 (ENSTGUG00000000432) #20 TBCEL (ENSTGUG00000000441) #21 TECTA (ENSTGUG00000000444) #22 SC5D (ENSTGUG00000024762) #23 SORL1 (ENSTGUG00000000462) #24 UBASH3B (ENSTGUG00000000479) #26 CRTAM (ENSTGUG00000000481) #27 ENSTGUG00000000485 #28 BSX (ENSTGUG00000000488) #29 HSPA8 (ENSTGUG00000000491) #31 ENSTGUG00000024233 CLMP (ENSTGUG00000019626) #32 ENSTGUG00000028855 GRAMD1B (ENSTGUG00000000497) #34 SCN3B (ENSTGUG00000000607) ENSTGUG00000024774 ATP12A (ENSTGUG00000000609) B3GAT1 (ENSTGUG00000000632) Medium ground finch MODERN SPECIES 301 ARHGEF12 (ENSGFOG00000010915) #19 GRIK4 (ENSGFOG00000010779) #20 ENSGFOG00000010757 #21 ENSGFOG00000010753 #21 TECTA (ENSGFOG00000010719) #22 SC5D (ENSGFOG00000010713) #23 SORL1 (ENSGFOG00000010693) #24 Flycatcher MODERN SPECIES 16 ENSFALG00000006060 THY1 (ENSFALG00000006049) #13 NECTIN1 (ENSFALG00000024285) #14 ENSFALG00000026494 TRIM29 (ENSFALG00000024938) #15 OAF (ENSFALG00000006018) #16 POU2F3 (ENSFALG00000006007) #17 ENSFALG00000023157 #18 ENSFALG00000028007 #18 ARHGEF12 (ENSFALG00000005981) #19 ENSFALG00000005988 ENSFALG00000025566 GRIK4 (ENSFALG00000005946) #20 TBCEL (ENSFALG00000028540) #21 ENSFALG00000023904 TECTA (ENSFALG00000005890) #22 ENSFALG00000027789 SC5D (ENSFALG00000026452) #23 SORL1 (ENSFALG00000005865) #24 ENSFALG00000028602 UBASH3B (ENSFALG00000005855) #26 CRTAM (ENSFALG00000005848) #27 ENSFALG00000005836 #28 BSX (ENSFALG00000005831) #29 HSPA8 (ENSFALG00000005812) #31 CLMP (ENSFALG00000005798) #32 GRAMD1B (ENSFALG00000005777) #34 SCN3B (ENSFALG00000005758) ENSFALG00000005754 B3GAT1 (ENSFALG00000005723) ENSFALG00000005685 Galloanserae ANCESTRAL SPECIES 27 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Anatidae ANCESTRAL SPECIES 30 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Duck MODERN SPECIES 16 H2AX (ENSAPLG00000029655) DPAGT1 (ENSAPLG00000010165) C2CD2L (ENSAPLG00000009128) ATP12A (ENSAPLG00000009590) SCN3B (ENSAPLG00000010155) ENSAPLG00000010327 #34 ENSAPLG00000016820 #34 CLMP (ENSAPLG00000010660) #32 HSPA8 (ENSAPLG00000010667) #31 BSX (ENSAPLG00000018698) #29 JHY (ENSAPLG00000010814) #28 CRTAM (ENSAPLG00000010895) #27 UBASH3B (ENSAPLG00000011138) #26 ENSAPLG00000013286 #24 TBCEL (ENSAPLG00000013944) #21 TECTA (ENSAPLG00000013764) #22 ENSAPLG00000021530 GRIK4 (ENSAPLG00000014007) #20 ARHGEF12 (ENSAPLG00000014925) #19 ENSAPLG00000015538 #18 ENSAPLG00000031248 #18 POU2F3 (ENSAPLG00000015548) #17 OAF (ENSAPLG00000000725) #16 TRIM29 (ENSAPLG00000000965) #15 NECTIN1 (ENSAPLG00000001931) #14 ENSAPLG00000020498 #13 USP2 (ENSAPLG00000030018) #12 C1QTNF5 (ENSAPLG00000030270) CBL (ENSAPLG00000013545) #7 NHERF4 (ENSAPLG00000016510) ENSAPLG00000025126 Pink-footed goose MODERN SPECIES 385 GRIK4 (ENSABRG00000001143) #20 TBCEL (ENSABRG00000001105) #21 TECTA (ENSABRG00000000408) #22 SC5D (ENSABRG00000000375) #23 SORL1 (ENSABRG00000000323) #24 Phasianidae ANCESTRAL SPECIES 27 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Phasianidae_b ANCESTRAL SPECIES 26 ENSGT00940000155838 #8 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Chicken MODERN SPECIES 16 C1QTNF5 (ENSGALG00010026120) MFRP (ENSGALG00010026113) #11 USP2 (ENSGALG00010026090) #12 THY1 (ENSGALG00010026023) #13 NECTIN1 (ENSGALG00010026003) #14 RNF26 (ENSGALG00010025983) #10 TRIM29 (ENSGALG00010025978) #15 OAF (ENSGALG00010025963) #16 CCDC160 (ENSGALG00010025953) #17 TMEM136-1 (ENSGALG00010025939) #18 TMEM136 (ENSGALG00010025931) #18 ARHGEF12 (ENSGALG00010025907) #19 GRIK4 (ENSGALG00010025846) #20 TBCEL (ENSGALG00010025830) #21 ENSGALG00010025820 TECTA (ENSGALG00010025806) #22 SC5D (ENSGALG00010025799) #23 SORL1 (ENSGALG00010025753) #24 UBASH3B (ENSGALG00010025703) #26 CRTAM (ENSGALG00010025654) #27 JHY (ENSGALG00010025647) #28 BSX (ENSGALG00010025614) #29 HSPA8 (ENSGALG00010025592) #31 CLMP (ENSGALG00010025573) #32 GRAMD1B (ENSGALG00010025562) #34 SCN3B (ENSGALG00010025429) ATP12A (ENSGALG00010025507) B3GAT1 (ENSGALG00010025417) ENSGALG00010025406 ACAD8 (ENSGALG00010025379) THYN1 (ENSGALG00010025360) Turkey MODERN SPECIES 18 MCAM (ENSMGAG00000002474) #8 ENSMGAG00000021349 C1QTNF5 (ENSMGAG00000002395) USP2 (ENSMGAG00000016773) #12 THY1 (ENSMGAG00000002600) #13 NECTIN1 (ENSMGAG00000002372) #14 TRIM29 (ENSMGAG00000002352) #15 OAF (ENSMGAG00000021741) #16 POU2F3 (ENSMGAG00000002316) #17 ENSMGAG00000022980 #18 ENSMGAG00000020533 #18 ARHGEF12 (ENSMGAG00000002234) #19 GRIK4 (ENSMGAG00000002074) #20 TBCEL (ENSMGAG00000002225) #21 ENSMGAG00000022127 TECTA (ENSMGAG00000002190) #22 SC5D (ENSMGAG00000002186) #23 SORL1 (ENSMGAG00000002011) #24 UBASH3B (ENSMGAG00000001969) #26 CRTAM (ENSMGAG00000001951) #27 JHY (ENSMGAG00000001944) #28 HSPA8 (ENSMGAG00000001929) #31 CLMP (ENSMGAG00000001891) #32 GRAMD1B (ENSMGAG00000001869) #34 SCN3B (ENSMGAG00000001846) ENSMGAG00000001740 B3GAT1 (ENSMGAG00000001706) ENSMGAG00000001651 ACAD8 (ENSMGAG00000001638) THYN1 (ENSMGAG00000001622) VPS26B (ENSMGAG00000001614) Japanese quail MODERN SPECIES 16 RNF26 (ENSCJPG00005009303) #10 C1QTNF5 (ENSCJPG00005009302) MFRP (ENSCJPG00005009301) #11 USP2 (ENSCJPG00005009300) #12 THY1 (ENSCJPG00005009299) #13 NECTIN1 (ENSCJPG00005009298) #14 TRIM29 (ENSCJPG00005009297) #15 OAF (ENSCJPG00005009296) #16 POU2F3 (ENSCJPG00005009295) #17 ENSCJPG00005009294 #18 ENSCJPG00005009293 #18 ARHGEF12 (ENSCJPG00005009292) #19 GRIK4 (ENSCJPG00005008705) #20 TBCEL (ENSCJPG00005008704) #21 ENSCJPG00005008703 TECTA (ENSCJPG00005008677) #22 SC5D (ENSCJPG00005008674) #23 ENSCJPG00005008479 UBASH3B (ENSCJPG00005008472) #26 CRTAM (ENSCJPG00005008470) #27 JHY (ENSCJPG00005008469) #28 BSX (ENSCJPG00005008468) #29 HSPA8 (ENSCJPG00005008461) #31 CLMP (ENSCJPG00005008448) #32 GRAMD1B (ENSCJPG00005008447) #34 SCN3B (ENSCJPG00005008446) ATP12A (ENSCJPG00005006649) B3GAT1 (ENSCJPG00005006628) ENSCJPG00005006627 ACAD8 (ENSCJPG00005006626) THYN1 (ENSCJPG00005006624) African ostrich MODERN SPECIES 573 NECTIN1 (ENSSCUG00000011428) #14 TRIM29 (ENSSCUG00000011431) #15 OAF (ENSSCUG00000011433) #16 POU2F3 (ENSSCUG00000011436) #17 ENSSCUG00000011437 #18 ENSSCUG00000011438 #18 ARHGEF12 (ENSSCUG00000011441) #19 GRIK4 (ENSSCUG00000011443) #20 TBCEL (ENSSCUG00000011444) #21 TECTA (ENSSCUG00000011452) #22 ENSSCUG00000011463 SC5D (ENSSCUG00000011465) #23 SORL1 (ENSSCUG00000011467) #24 UBASH3B (ENSSCUG00000011476) #26 CRTAM (ENSSCUG00000011479) #27 JHY (ENSSCUG00000011481) #28 HSPA8 (ENSSCUG00000011484) #31 CLMP (ENSSCUG00000011496) #32 GRAMD1B (ENSSCUG00000011501) #34 SCN3B (ENSSCUG00000011511) ATP12A (ENSSCUG00000011693) B3GAT1 (ENSSCUG00000012097) ENSSCUG00000012100 ACAD8 (ENSSCUG00000012112) THYN1 (ENSSCUG00000012129) Australian saltwater crocodile MODERN SPECIES 54 MCAM (ENSCPRG00005004056) #8 RNF26 (ENSCPRG00005004053) #10 C1QTNF5 (ENSCPRG00005004046) USP2 (ENSCPRG00005003973) #12 ENSCPRG00005003962 #13 NECTIN1 (ENSCPRG00005003948) #14 ENSCPRG00005003934 TRIM29 (ENSCPRG00005003931) #15 OAF (ENSCPRG00005003929) #16 POU2F3 (ENSCPRG00005003901) #17 ENSCPRG00005003895 #18 ENSCPRG00005003892 #18 ARHGEF12 (ENSCPRG00005003213) #19 GRIK4 (ENSCPRG00005003077) #20 TBCEL (ENSCPRG00005003004) #21 TECTA (ENSCPRG00005002909) #22 SC5D (ENSCPRG00005002893) #23 SORL1 (ENSCPRG00005002863) #24 UBASH3B (ENSCPRG00005002839) #26 CRTAM (ENSCPRG00005002830) #27 JHY (ENSCPRG00005002823) #28 HSPA8 (ENSCPRG00005002806) #31 CLMP (ENSCPRG00005002794) #32 SCN3B (ENSCPRG00005002791) GRAMD1B (ENSCPRG00005002749) #34 ATP12A (ENSCPRG00005002737) B3GAT1 (ENSCPRG00005002716) ENSCPRG00005002701 ACAD8 (ENSCPRG00005002673) THYN1 (ENSCPRG00005002659) VPS26B (ENSCPRG00005002654) Cryptodira ANCESTRAL SPECIES 32 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Testudinoidea ANCESTRAL SPECIES 29 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00950000185908 ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 Emydidae ANCESTRAL SPECIES 42 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00950000185908 ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 painted turtle MODERN SPECIES 2419 ENSCPBG00000007914 RNF26 (ENSCPBG00000007918) #10 C1QTNF5 (ENSCPBG00000007926) MFRP (ENSCPBG00000007932) #11 USP2 (ENSCPBG00000007945) #12 THY1 (ENSCPBG00000007958) #13 NECTIN1 (ENSCPBG00000007975) #14 TRIM29 (ENSCPBG00000008017) #15 OAF (ENSCPBG00000008027) #16 POU2F3 (ENSCPBG00000008035) #17 ENSCPBG00000008042 #18 ENSCPBG00000008048 #18 ARHGEF12 (ENSCPBG00000008441) #19 GRIK4 (ENSCPBG00000014090) #20 TBCEL (ENSCPBG00000014118) #21 TECTA (ENSCPBG00000014125) #22 SC5D (ENSCPBG00000014148) #23 SORL1 (ENSCPBG00000014172) #24 UBASH3B (ENSCPBG00000014962) #26 CRTAM (ENSCPBG00000014967) #27 JHY (ENSCPBG00000014972) #28 BSX (ENSCPBG00000014976) #29 HSPA8 (ENSCPBG00000014981) #31 CLMP (ENSCPBG00000014992) #32 GRAMD1B (ENSCPBG00000014998) #34 SCN3B (ENSCPBG00000015020) ATP12A (ENSCPBG00000015067) ENSCPBG00000017725 B3GAT1 (ENSCPBG00000017731) ENSCPBG00000017751 ACAD8 (ENSCPBG00000017781) Three-toed box turtle MODERN SPECIES 167 RNF26 (ENSTMTG00000006991) #10 C1QTNF5 (ENSTMTG00000006980) ENSTMTG00000006945 THY1 (ENSTMTG00000006932) #13 ENSTMTG00000006919 NECTIN1 (ENSTMTG00000006898) #14 TRIM29 (ENSTMTG00000006873) #15 ENSTMTG00000006856 OAF (ENSTMTG00000006844) #16 POU2F3 (ENSTMTG00000006736) #17 ENSTMTG00000006708 #18 ENSTMTG00000006698 #18 ARHGEF12 (ENSTMTG00000006567) #19 GRIK4 (ENSTMTG00000006477) #20 TBCEL (ENSTMTG00000006455) #21 TECTA (ENSTMTG00000006193) #22 SC5D (ENSTMTG00000006145) #23 SORL1 (ENSTMTG00000006009) #24 UBASH3B (ENSTMTG00000005941) #26 CRTAM (ENSTMTG00000005923) #27 BSX (ENSTMTG00000005902) #29 HSPA8 (ENSTMTG00000005836) #31 CLMP (ENSTMTG00000005784) #32 ENSTMTG00000005776 #34 ENSTMTG00000005716 #34 SCN3B (ENSTMTG00000005690) ATP12A (ENSTMTG00000005572) ENSTMTG00000005545 B3GAT1 (ENSTMTG00000005524) ENSTMTG00000005502 ACAD8 (ENSTMTG00000005472) Testudinidae ANCESTRAL SPECIES 35 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00940000173536 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00950000185908 ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 Goode s thornscrub tortoise MODERN SPECIES 10 RNF26 (ENSGEVG00005018688) #10 C1QTNF5 (ENSGEVG00005018674) MFRP (ENSGEVG00005018627) #11 USP2 (ENSGEVG00005018523) #12 THY1 (ENSGEVG00005018511) #13 ENSGEVG00005018501 NECTIN1 (ENSGEVG00005018483) #14 TRIM29 (ENSGEVG00005018385) #15 OAF (ENSGEVG00005018333) #16 POU2F3 (ENSGEVG00005018270) #17 ENSGEVG00005018237 #18 ENSGEVG00005018216 #18 ARHGEF12 (ENSGEVG00005018116) #19 GRIK4 (ENSGEVG00005017950) #20 TBCEL (ENSGEVG00005017912) #21 TECTA (ENSGEVG00005017677) #22 SC5D (ENSGEVG00005017633) #23 SORL1 (ENSGEVG00005017404) #24 UBASH3B (ENSGEVG00005017328) #26 CRTAM (ENSGEVG00005017253) #27 BSX (ENSGEVG00005017220) #29 HSPA8 (ENSGEVG00005017185) #31 CLMP (ENSGEVG00005017097) #32 ENSGEVG00005017066 #34 ENSGEVG00005016843 #34 SCN3B (ENSGEVG00005016798) ATP12A (ENSGEVG00005016620) ENSGEVG00005016581 ENSGEVG00005016554 B3GAT1 (ENSGEVG00005016530) ENSGEVG00005016502 Abingdon island giant tortoise MODERN SPECIES 1086 GRIK4 (ENSCABG00000016930) #20 ENSCABG00000016921 #21 ENSCABG00000016918 #21 TECTA (ENSCABG00000016909) #22 Chinese turtle MODERN SPECIES 1891 OAF (ENSPSIG00000014368) #16 POU2F3 (ENSPSIG00000014141) #17 ENSPSIG00000014029 #18 ENSPSIG00000014022 #18 ARHGEF12 (ENSPSIG00000013776) #19 GRIK4 (ENSPSIG00000012538) #20 TBCEL (ENSPSIG00000012287) #21 TECTA (ENSPSIG00000011339) #22 ZW10 (ENSPSIG00000010216) ENSPSIG00000010127 ENSPSIG00000001620 USP28 (ENSPSIG00000008806) HTR3B (ENSPSIG00000008415) HTR3A (ENSPSIG00000007231) ZBTB16 (ENSPSIG00000006603) ENSPSIG00000006538 ENSPSIG00000006531 Lepidosauria ANCESTRAL SPECIES 20 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Episquamata ANCESTRAL SPECIES 12 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Laterata ANCESTRAL SPECIES 15 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000161289 #12 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00940000173536 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Common wall lizard MODERN SPECIES 6 ENSPMRG00000023063 THY1 (ENSPMRG00000023060) #13 ENSPMRG00000023058 ENSPMRG00000023054 ENSPMRG00000023051 NECTIN1 (ENSPMRG00000023047) #14 TRIM29 (ENSPMRG00000023041) #15 ENSPMRG00000023037 OAF (ENSPMRG00000023035) #16 POU2F3 (ENSPMRG00000023020) #17 ENSPMRG00000023013 #18 ENSPMRG00000023009 #18 ARHGEF12 (ENSPMRG00000022786) #19 GRIK4 (ENSPMRG00000022683) #20 TBCEL (ENSPMRG00000022678) #21 TECTA (ENSPMRG00000022663) #22 SC5D (ENSPMRG00000022657) #23 SORL1 (ENSPMRG00000021795) #24 UBASH3B (ENSPMRG00000021567) #26 CRTAM (ENSPMRG00000021543) #27 BSX (ENSPMRG00000021537) #29 HSPA8 (ENSPMRG00000021522) #31 CLMP (ENSPMRG00000021515) #32 GRAMD1B (ENSPMRG00000021416) #34 SCN3B (ENSPMRG00000021392) ENSPMRG00000021387 ENSPMRG00000021381 ATP12A (ENSPMRG00000017987) ENSPMRG00000017461 B3GAT1 (ENSPMRG00000017454) ENSPMRG00000017673 Argentine black and white tegu MODERN SPECIES 42 MCAM (ENSSMRG00000021909) #8 RNF26 (ENSSMRG00000021910) #10 C1QTNF5 (ENSSMRG00000021912) MFRP (ENSSMRG00000021913) #11 USP2 (ENSSMRG00000021915) #12 THY1 (ENSSMRG00000021917) #13 NECTIN1 (ENSSMRG00000021920) #14 TRIM29 (ENSSMRG00000021922) #15 OAF (ENSSMRG00000021923) #16 POU2F3 (ENSSMRG00000021924) #17 ENSSMRG00000021925 #18 ENSSMRG00000021926 #18 ARHGEF12 (ENSSMRG00000021927) #19 GRIK4 (ENSSMRG00000021929) #20 TBCEL (ENSSMRG00000021930) #21 TECTA (ENSSMRG00000021931) #22 SC5D (ENSSMRG00000021932) #23 SORL1 (ENSSMRG00000021933) #24 UBASH3B (ENSSMRG00000021940) #26 CRTAM (ENSSMRG00000021941) #27 ENSSMRG00000021942 BSX (ENSSMRG00000021943) #29 HSPA8 (ENSSMRG00000021944) #31 CLMP (ENSSMRG00000021947) #32 GRAMD1B (ENSSMRG00000021948) #34 SCN3B (ENSSMRG00000021949) ATP12A (ENSSMRG00000021951) ENSSMRG00000022437 B3GAT1 (ENSSMRG00000022445) ENSSMRG00000022446 ACAD8 (ENSSMRG00000022447) Toxicofera ANCESTRAL SPECIES 20 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00390000013354.d ENSGT00940000156036 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Elapidae ANCESTRAL SPECIES 15 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00390000013354.c.a.a ENSGT00940000156036 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Elapidae_a ANCESTRAL SPECIES 31 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Acanthophiinae ANCESTRAL SPECIES 30 ENSGT00960000193219 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162.d #18 ENSGT00390000008162.c #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00550000075101 #23 ENSGT01030000234563.a.b #24 ENSGT00940000156097 #26 ENSGT00940000159804 #27 ENSGT00390000002823 #28 ENSGT00940000161473 #29 ENSGT00950000183206.b #31 ENSGT00940000161031 #32 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00940000159259.b ENSGT00940000157165 ENSGT00950000182942.b ENSGT00940000157590 ENSGT00390000013297 Mainland tiger snake MODERN SPECIES 165 NECTIN1 (ENSNSUG00000012087) #14 TRIM29 (ENSNSUG00000012086) #15 OAF (ENSNSUG00000012085) #16 POU2F3 (ENSNSUG00000012084) #17 ENSNSUG00000012083 #18 ENSNSUG00000012082 #18 ARHGEF12 (ENSNSUG00000012052) #19 GRIK4 (ENSNSUG00000012050) #20 ENSNSUG00000012048 #21 ENSNSUG00000012047 #21 ENSNSUG00000012046 TECTA (ENSNSUG00000012045) #22 SC5D (ENSNSUG00000012044) #23 SORL1 (ENSNSUG00000010918) #24 UBASH3B (ENSNSUG00000010894) #26 CRTAM (ENSNSUG00000010892) #27 BSX (ENSNSUG00000010890) #29 Eastern brown snake MODERN SPECIES 42 CBL (ENSPTXG00000004558) #7 MCAM (ENSPTXG00000004389) #8 RNF26 (ENSPTXG00000004383) #10 ENSPTXG00000004382 ENSPTXG00000004381 THY1 (ENSPTXG00000004378) #13 NECTIN1 (ENSPTXG00000004376) #14 TRIM29 (ENSPTXG00000004373) #15 OAF (ENSPTXG00000004369) #16 POU2F3 (ENSPTXG00000012182) #17 ENSPTXG00000012181 #18 ENSPTXG00000012180 #18 ARHGEF12 (ENSPTXG00000012178) #19 GRIK4 (ENSPTXG00000012172) #20 TBCEL (ENSPTXG00000012171) #21 TECTA (ENSPTXG00000012170) #22 SC5D (ENSPTXG00000012169) #23 ENSPTXG00000012168 ENSPTXG00000012167 SORL1 (ENSPTXG00000012166) #24 UBASH3B (ENSPTXG00000012164) #26 CRTAM (ENSPTXG00000012163) #27 JHY (ENSPTXG00000012162) #28 BSX (ENSPTXG00000012161) #29 HSPA8 (ENSPTXG00000012159) #31 CLMP (ENSPTXG00000012158) #32 ENSPTXG00000012156 #34 ENSPTXG00000012155 #34 SCN3B (ENSPTXG00000012062) ATP12A (ENSPTXG00000009618) ENSPTXG00000009605 Blue-lipped sea krait MODERN SPECIES 2321 TBCEL (ENSLLTG00000013415) #21 TECTA (ENSLLTG00000013440) #22 Indian cobra MODERN SPECIES 7 ENSNNAG00000014107 #11 ENSNNAG00000014081 THY1 (ENSNNAG00000014060) #13 NECTIN1 (ENSNNAG00000014009) #14 ENSNNAG00000013998 TRIM29 (ENSNNAG00000013952) #15 OAF (ENSNNAG00000013922) #16 POU2F3 (ENSNNAG00000013905) #17 ENSNNAG00000013886 #18 ENSNNAG00000013868 #18 ARHGEF12 (ENSNNAG00000013779) #19 GRIK4 (ENSNNAG00000012933) #20 ENSNNAG00000012872 TBCEL (ENSNNAG00000012847) #21 ENSNNAG00000012821 TECTA (ENSNNAG00000012695) #22 SC5D (ENSNNAG00000012665) #23 ENSNNAG00000011634 UBASH3B (ENSNNAG00000011405) #26 CRTAM (ENSNNAG00000011365) #27 BSX (ENSNNAG00000011343) #29 HSPA8 (ENSNNAG00000011302) #31 CLMP (ENSNNAG00000011264) #32 ENSNNAG00000011211 #34 ENSNNAG00000011013 #34 SCN3B (ENSNNAG00000010959) ATP12A (ENSNNAG00000010839) B3GAT1 (ENSNNAG00000010801) ACAD8 (ENSNNAG00000010638) THYN1 (ENSNNAG00000010599) VPS26B (ENSNNAG00000010578) Lizard MODERN SPECIES 6 ENSACAG00000003505 NECTIN1 (ENSACAG00000003487) #14 TRIM29 (ENSACAG00000041647) #15 OAF (ENSACAG00000003470) #16 POU2F3 (ENSACAG00000003384) #17 ENSACAG00000044380 #18 ENSACAG00000003371 #18 ARHGEF12 (ENSACAG00000003208) #19 GRIK4 (ENSACAG00000002979) #20 TBCEL (ENSACAG00000002788) #21 TECTA (ENSACAG00000002699) #22 SC5D (ENSACAG00000002668) #23 SORL1 (ENSACAG00000002367) #24 UBASH3B (ENSACAG00000004950) #26 CRTAM (ENSACAG00000004941) #27 BSX (ENSACAG00000004933) #29 HSPA8 (ENSACAG00000004884) #31 CLMP (ENSACAG00000004869) #32 ENSACAG00000042120 #34 ENSACAG00000004807 #34 SCN3B (ENSACAG00000004778) ENSACAG00000038042 ENSACAG00000020981 Anura DUPLICATION Anura ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.b.g #22 Leishan spiny toad MODERN SPECIES 2 KMT2B (ENSLLEG00000026009) U2AF1L4 (ENSLLEG00000026626) ENSLLEG00000026799 PSENEN (ENSLLEG00000026825) ENSLLEG00000026868 ENSLLEG00000026897 LIN37 (ENSLLEG00000026931) ENSLLEG00000027017 ENSLLEG00000027042 UPK1A (ENSLLEG00000027299) APLP1 (ENSLLEG00000027392) ENSLLEG00000027884 NPHS1 (ENSLLEG00000028080) ENSLLEG00000028227 ENSLLEG00000028368 ENSLLEG00000028428 #22 ENSLLEG00000028516 ENSLLEG00000028549 ##22 ENSLLEG00000028882 ##22 ENSLLEG00000029066 ENSLLEG00000029086 ##22 ENSLLEG00000029121 ENSLLEG00000029128 ENSLLEG00000029140 ENSLLEG00000029145 ENSLLEG00000029155 ENSLLEG00000017755 ENSLLEG00000017937 HPN (ENSLLEG00000018127) ENSLLEG00000018223 ENSLLEG00000018240 Anura ANCESTRAL SPECIES 150 ENSGT00950000182849.A.f.a ENSGT00940000167064 ENSGT00940000155772.b #7 ENSGT00940000155838 #8 ENSGT00390000016584 #10 ENSGT00940000161353 ENSGT00940000154525.b.b #11 ENSGT00940000155545.b ENSGT00390000012352 #13 ENSGT00940000156933 #14 ENSGT00940000161416 #15 ENSGT00940000157627 #17 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00950000183155.a.a.a.b.h #22 Frog MODERN SPECIES 7 cbl (ENSXETG00000021588) #7 mcam (ENSXETG00000021591) #8 rnf26 (ENSXETG00000046315) #10 mfrp (ENSXETG00000037911) #11 usp2 (ENSXETG00000037568) thy1 (ENSXETG00000021603) #13 nectin1 (ENSXETG00000009243) #14 ENSXETG00000040443 trim29 (ENSXETG00000009248) #15 POU2F3 (ENSXETG00000015251) #17 ENSXETG00000047315 arhgef12 (ENSXETG00000017018) #19 grik4 (ENSXETG00000017031) #20 tlcd5 (ENSXETG00000017046) #18 tbcel (ENSXETG00000024614) #21 tecta.1 (ENSXETG00000017048) #22 sorl1 (ENSXETG00000016937) #24 sc5d (ENSXETG00000040073) #23 bsx (ENSXETG00000016950) #29 ENSXETG00000046608 crtam (ENSXETG00000003896) #27 ENSXETG00000049396 ENSXETG00000045557 XB5896631 [provisional] (ENSXETG00000030114) ENSXETG00000038464 ubash3b (ENSXETG00000003900) #26 tub (ENSXETG00000003913) foxred1 (ENSXETG00000000843) srpra (ENSXETG00000003920) fam118b (ENSXETG00000003924) rpl27a (ENSXETG00000003912) Leishan spiny toad MODERN SPECIES 2 ENSLLEG00000018163 ENSLLEG00000018116 ENSLLEG00000018098 ENSLLEG00000017394 ENSLLEG00000017342 ENSLLEG00000017313 ENSLLEG00000017226 ENSLLEG00000017193 ENSLLEG00000017136 ENSLLEG00000017073 ENSLLEG00000017048 ENSLLEG00000017014 ENSLLEG00000016957 TBCEL (ENSLLEG00000016855) #21 ENSLLEG00000016759 TECTA (ENSLLEG00000015971) #22 ENSLLEG00000015926 ENSLLEG00000015909 ARCN1 (ENSLLEG00000015604) IFT46 (ENSLLEG00000015276) ENSLLEG00000015141 ENSLLEG00000014915 ENSLLEG00000014868 ENSLLEG00000014851 HMBS (ENSLLEG00000014650) DPAGT1 (ENSLLEG00000014528) C2CD2L (ENSLLEG00000014333) HINFP (ENSLLEG00000014041) ENSLLEG00000013993 ENSLLEG00000013980 ENSLLEG00000013960 Coelacanth MODERN SPECIES 243 C2CD2L (ENSLACG00000016702) MCAM (ENSLACG00000016514) #8 RNF26 (ENSLACG00000016418) #10 C1QTNF5 (ENSLACG00000016316) MFRP (ENSLACG00000016267) #11 USP2 (ENSLACG00000016056) #12 THY1 (ENSLACG00000022335) #13 ENSLACG00000014814 NECTIN1 (ENSLACG00000014271) #14 OAF (ENSLACG00000011164) #16 POU2F3 (ENSLACG00000010663) #17 TLCD5 (ENSLACG00000010577) #18 ARHGEF12 (ENSLACG00000009264) #19 GRIK4 (ENSLACG00000005660) #20 TBCEL (ENSLACG00000004247) #21 TECTA (ENSLACG00000001253) #22 Actinopterygii ANCESTRAL SPECIES 108 ENSGT00940000156649 #34 ENSGT00390000018560.b ENSGT00440000039164 ENSGT00440000039324 ENSGT01100000263551.a ENSGT00500000044966 ENSGT00940000158657 ENSGT00940000155587.a.a ENSGT00390000012008 #16 ENSGT00940000157627 #17 ENSGT00390000008162 #18 ENSGT00940000157662 #19 ENSGT00940000159111 #20 ENSGT00530000063405.b #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 Reedfish MODERN SPECIES 17 GRAMD1B (ENSECRG00000021564) #34 ENSECRG00000021607 scn3b (ENSECRG00000011308) ENSECRG00000011331 nrgna (ENSECRG00000011349) hepacama (ENSECRG00000011363) ENSECRG00000011380 slc37a2 (ENSECRG00000011413) ENSECRG00000011453 OAF (ENSECRG00000011474) #16 pou2f3 (ENSECRG00000011483) #17 tlcd5a (ENSECRG00000011499) #18 ARHGEF12 (ENSECRG00000011526) #19 GRIK4 (ENSECRG00000011632) #20 tbcela (ENSECRG00000011665) #21 TECTA (ENSECRG00000011711) #22 ENSECRG00000011954 MFRP (ENSECRG00000011999) #11 c1qtnf5 (ENSECRG00000012013) MCAM (ENSECRG00000012045) #8 CBL (ENSECRG00000012079) #7 ccdc153 (ENSECRG00000012099) zgc:194948 (ENSECRG00000012111) foxr1 (ENSECRG00000012119) cenatac (ENSECRG00000012134) rps25 (ENSECRG00000012145) trappc4 (ENSECRG00000012158) slc37a4a (ENSECRG00000012179) hyou1 (ENSECRG00000012208) vps11 (ENSECRG00000012252) ift46 (ENSECRG00000012274) Neopterygii ANCESTRAL SPECIES 441 ENSGT00530000063405.b.f #21 ENSGT00960000189385 ENSGT00530000063405.b.e #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b Spotted gar MODERN SPECIES 665 fdxacb1 (ENSLOCG00000001403) mia (ENSLOCG00000001418) cfap68 (ENSLOCG00000001435) cryabb (ENSLOCG00000001451) hspb2 (ENSLOCG00000001463) dixdc1a (ENSLOCG00000001475) dlat (ENSLOCG00000001499) pih1d2 (ENSLOCG00000001526) nkapd1 (ENSLOCG00000001540) gig2p (ENSLOCG00000017859) ubash3bb (ENSLOCG00000001560) #26 ENSLOCG00000001595 sb:cb37 (ENSLOCG00000001610) ENSLOCG00000001706 tbcela (ENSLOCG00000001752) #21 TECTA (ENSLOCG00000001765) #22 SIK3 (ENSLOCG00000001801) pafah1b2 (ENSLOCG00000001838) SIDT2 (ENSLOCG00000001852) bicdl2 (ENSLOCG00000001903) ENSLOCG00000001926 ENSLOCG00000001939 ufc1 (ENSLOCG00000001961) ENSLOCG00000001990 GRIK4 (ENSLOCG00000002001) #20 ARHGEF12 (ENSLOCG00000002060) #19 tlcd5a (ENSLOCG00000002100) #18 pou2f3 (ENSLOCG00000002109) #17 OAF (ENSLOCG00000002126) #16 ENSLOCG00000002144 slc37a2 (ENSLOCG00000002183) Osteoglossocephalai ANCESTRAL SPECIES 335 ENSGT00530000063405.b.f #21 ENSGT00960000189385 ENSGT00940000156097.a #26 ENSGT00540000072704 ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000162996 ENSGT00530000063405.b.e #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a Osteoglossiformes ANCESTRAL SPECIES 24 ENSGT00940000158375 ENSGT00940000153695.A.b ENSGT00940000167856.a.a ENSGT00940000153306.A.b ENSGT00940000159642.f.b ENSGT00940000155801.a ENSGT00940000163496.b.b.a ENSGT00950000182913.A.a.b ENSGT01030000234563.a.b #24 ENSGT00940000156097.b #26 ENSGT00940000159186.a ENSGT00970000194164 ENSGT00770000120972 ENSGT00940000162996.d ENSGT00530000063405.b.e #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00920000149180.b ENSGT00940000153571.a.b ENSGT00820000127055.a.a.a ENSGT00940000154335.a ENSGT00940000164070.b ENSGT00390000013335 ENSGT00390000017209 ENSGT00730000111188 ENSGT01030000234614.B.a.a.b.a.b ENSGT00950000183096.a.a.c.b.f ENSGT01030000234614.B.a.a.b.b ENSGT00950000183026.B.c.b ENSGT00940000155349.d P. kingsleyae MODERN SPECIES 78 UBASH3B (ENSPKIG00000020767) #26 ENSPKIG00000020862 zgc:113019 (ENSPKIG00000020878) ENSPKIG00000020887 ENSPKIG00000020905 ENSPKIG00000020967 tbcela (ENSPKIG00000021079) #21 TECTA (ENSPKIG00000021126) #22 ENSPKIG00000021223 TLCD3A (ENSPKIG00000021285) smtnl (ENSPKIG00000021302) ENSPKIG00000021319 poldip2 (ENSPKIG00000021351) LRRC75A (ENSPKIG00000021390) crk (ENSPKIG00000021410) ift20 (ENSPKIG00000021432) tpte (ENSPKIG00000021473) fgl1b (ENSPKIG00000021546) ENSPKIG00000021565 ENSPKIG00000021573 vps36 (ENSPKIG00000021597) PROSER1 (ENSPKIG00000021689) STOML3 (ENSPKIG00000021724) Asian bonytongue MODERN SPECIES 19 PHLDB1 (ENSSFOG00015008001) atf5a (ENSSFOG00015007984) zgc:158412 (ENSSFOG00015007904) zbtb44 (ENSSFOG00015007888) ADAMTS8 (ENSSFOG00015007875) adamts15a (ENSSFOG00015007852) gig2o (ENSSFOG00015007829) bco2b (ENSSFOG00015007737) SORL1 (ENSSFOG00015007619) #24 UBASH3B (ENSSFOG00015007541) #26 ENSSFOG00015029942 usf1l (ENSSFOG00015029689) ENSSFOG00015007462 ENSSFOG00015007379 tbcela (ENSSFOG00015031542) #21 TECTA (ENSSFOG00015007296) #22 ENSSFOG00015029627 ENSSFOG00015007211 smtnl (ENSSFOG00015007144) ENSSFOG00015007140 poldip2 (ENSSFOG00015007088) LRRC75A (ENSSFOG00015007049) crk (ENSSFOG00015007038) tpte (ENSSFOG00015006958) fgl1b (ENSSFOG00015006944) ENSSFOG00015006917 vps36 (ENSSFOG00015006867) PROSER1 (ENSSFOG00015006843) STOML3 (ENSSFOG00015006805) ENSSFOG00015006770 ENSSFOG00015006755 Clupeocephala ANCESTRAL SPECIES 154 ENSGT00530000063405.b.f #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01090000260061.c.b ENSGT00940000157915 ENSGT01100000263573.a.b ENSGT00940000153576.c.b.w ENSGT00940000157119.a ENSGT00940000156538.b ENSGT00950000182894.C ENSGT00510000048837 ENSGT00530000063869.A ENSGT00940000165230.a ENSGT00390000001735 Otomorpha ANCESTRAL SPECIES 23 ENSGT00940000167856.a ENSGT00940000163496.b.b.a ENSGT00950000182856.b.d ENSGT00940000155801.d ENSGT00940000159642.f.b ENSGT00940000153306.A.b ENSGT00940000155479 ENSGT00390000010003.g ENSGT00950000182913.A.a.b.b ENSGT00940000156097.b #26 ENSGT00940000159186 ENSGT00940000157083 ENSGT00970000194164 ENSGT00770000120972 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01090000260061.c.b ENSGT01030000234532.A.a.a.a.a.a ENSGT00940000160644 ENSGT00940000162552.b ENSGT00940000163054 ENSGT00390000013444.a.b.b.a ENSGT00940000154911 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000159921.c ENSGT00940000167701.b Clupeiformes ANCESTRAL SPECIES 33 ENSGT00940000158375 ENSGT00940000167856.a ENSGT00940000163496.b.b.a ENSGT00950000182856.b.d ENSGT00940000155801.d ENSGT00940000159642.f.b ENSGT00940000153306.A.b ENSGT00940000155479 ENSGT00950000182913.A.a.b.b ENSGT00940000156097.b #26 ENSGT00940000159186 ENSGT00940000157083 ENSGT00970000194164 ENSGT00770000120972 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00920000149180.b.h ENSGT00820000127055.a.b ENSGT01090000260061.c.b ENSGT01030000234532.A.a.a.a.a.a ENSGT00940000160644 ENSGT00940000162552.b ENSGT00940000163054.c ENSGT00390000013444.a.b.b.a ENSGT00940000154911 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000159921.c Atlantic herring MODERN SPECIES 24 stk36 (ENSCHAG00000016545) zgc:158412 (ENSCHAG00000016555) gig2o (ENSCHAG00000016564) snx19a (ENSCHAG00000016588) adamts15a (ENSCHAG00000016609) ADAMTS8 (ENSCHAG00000016656) zbtb44 (ENSCHAG00000017172) timm8b (ENSCHAG00000017183) BCO2 (ENSCHAG00000017209) UBASH3B (ENSCHAG00000017462) #26 ENSCHAG00000017749 usf1l (ENSCHAG00000017757) ENSCHAG00000017759 ENSCHAG00000017771 TBCEL (ENSCHAG00000017796) #21 TECTA (ENSCHAG00000017809) #22 ENSCHAG00000017932 ENSCHAG00000018024 ENSCHAG00000018036 sebox (ENSCHAG00000018043) POLDIP2 (ENSCHAG00000018065) CRK (ENSCHAG00000018337) ywhae2 (ENSCHAG00000018357) ENSCHAG00000018429 SIPA1 (ENSCHAG00000018448) ENSCHAG00000018456 ENSCHAG00000018470 FERMT3 (ENSCHAG00000018546) stip1 (ENSCHAG00000018915) FLRT1 (ENSCHAG00000019659) rps6ka4 (ENSCHAG00000019731) Denticle herring MODERN SPECIES 16 zbtb44 (ENSDCDG00000016317) timm8b (ENSDCDG00000016316) BCO2 (ENSDCDG00000016124) UBASH3B (ENSDCDG00000016098) #26 ENSDCDG00000016094 usf1l (ENSDCDG00000015595) TBCEL (ENSDCDG00000015551) #21 UBASH3B (ENSDCDG00000015461) #26 ENSDCDG00000015443 usf1l (ENSDCDG00000014607) ENSDCDG00000014578 ENSDCDG00000014572 #21 TLCD3A (ENSDCDG00000014558) ENSDCDG00000014546 sebox (ENSDCDG00000014542) TECTA (ENSDCDG00000014462) #22 ENSDCDG00000014247 ENSDCDG00000014198 ENSDCDG00000014159 sebox (ENSDCDG00000014144) POLDIP2 (ENSDCDG00000014073) LRRC75A (ENSDCDG00000014027) CRK (ENSDCDG00000014011) ywhae2 (ENSDCDG00000013958) ENSDCDG00000035772 SIPA1 (ENSDCDG00000035769) ENSDCDG00000035766 kat5b (ENSDCDG00000035764) FERMT3 (ENSDCDG00000035757) stip1 (ENSDCDG00000035750) FLRT1 (ENSDCDG00000035738) Otophysi ANCESTRAL SPECIES 27 ENSGT00940000167856.a ENSGT00940000163496.b.b.a ENSGT00950000182856.b.d ENSGT00940000155801.d ENSGT00940000159642.f.b ENSGT00940000153306.A.b ENSGT00940000155479 ENSGT00390000010003.g ENSGT00950000182913.A.a.b.b ENSGT00940000156097.b #26 ENSGT00940000159186 ENSGT00940000157083 ENSGT00970000194164 ENSGT00770000120972 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 ENSGT00940000153592.B.a ENSGT01030000234555.a.a.a.c.a ENSGT00390000017523 ENSGT00950000183135.A.a ENSGT00940000153491.b.b.a ENSGT00990000205129 ENSGT00390000001189.a ENSGT00390000017214 ENSGT00390000018151 ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00940000175063 Characiphysae ANCESTRAL SPECIES 65 ENSGT00940000158375 ENSGT00940000167856.a ENSGT00940000163496.b.b.a ENSGT00950000182856.b.d ENSGT00940000155801.d ENSGT00940000159642.f.b ENSGT00940000153306.A.b ENSGT00940000155479 ENSGT00950000182913.A.a.b.b ENSGT00940000156097.b #26 ENSGT00940000159186 ENSGT00940000157083 ENSGT00970000194164 ENSGT00770000120972 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 Channel catfish MODERN SPECIES 20 gig2o (ENSIPUG00000009280) ENSIPUG00000009297 Adamts15 (ENSIPUG00000009309) ENSIPUG00000009336 zbtb44 (ENSIPUG00000009373) timm8b (ENSIPUG00000009408) ENSIPUG00000009419 Bco2 (ENSIPUG00000009432) BCO2 (ENSIPUG00000009478) UBASH3B (ENSIPUG00000009568) #26 f11r (ENSIPUG00000009630) usf1l (ENSIPUG00000009648) ENSIPUG00000009693 ENSIPUG00000009703 TBCEL (ENSIPUG00000009714) #21 TECTA (ENSIPUG00000009734) #22 ENSIPUG00000009795 ENSIPUG00000009857 timm22 (ENSIPUG00000009867) spns3 (ENSIPUG00000009882) ruvbl2 (ENSIPUG00000009910) SPNS2 (ENSIPUG00000009939) spns3 (ENSIPUG00000009962) ube2g1a (ENSIPUG00000010059) ankfy1 (ENSIPUG00000010171) cyb5d2 (ENSIPUG00000010275) ZZEF1 (ENSIPUG00000010298) ATP2A3 (ENSIPUG00000010531) camkk1 (ENSIPUG00000010647) p2rx1 (ENSIPUG00000010709) Megf9 (ENSIPUG00000010740) Characiphysae_b ANCESTRAL SPECIES 43 ENSGT00940000158375 ENSGT00940000167856.a ENSGT00940000163496.b.b.a ENSGT00950000182856.b.d ENSGT00940000155801.d ENSGT00940000159642.f.b ENSGT00940000153306.A.b ENSGT00940000155479 ENSGT00950000182913.A.a.b.b ENSGT00940000156097.b #26 ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000162996 ENSGT00770000120972 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f Characoidei ANCESTRAL SPECIES 69 ENSGT00940000158375 ENSGT00940000167856.a ENSGT00940000163496.b.b.a ENSGT00950000182856.b.d ENSGT00940000155801.d ENSGT00940000159642.f.b ENSGT00940000153306.A.b ENSGT00940000155479 ENSGT00950000182913.A.a.b.b ENSGT00940000156097.b #26 ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000162996 ENSGT00770000120972 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000155193 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f Red-bellied piranha MODERN SPECIES 96 TBCEL (ENSPNAG00000009784) #21 TECTA (ENSPNAG00000009763) #22 ENSPNAG00000029516 ENSPNAG00000029359 TIMM22 (ENSPNAG00000005699) ptges (ENSPNAG00000029325) usp20 (ENSPNAG00000029303) zgc:103692 (ENSPNAG00000029243) med22 (ENSPNAG00000029208) rpl7a (ENSPNAG00000029194) surf1 (ENSPNAG00000006796) surf6 (ENSPNAG00000006939) kyat1 (ENSPNAG00000029006) prkaa1 (ENSPNAG00000004485) ENSPNAG00000028947 ENSPNAG00000028939 znrf2b (ENSPNAG00000028933) Mexicana tetra MODERN SPECIES 32 atf5a (ENSAMXG00000035183) stk36 (ENSAMXG00000041287) zgc:158412 (ENSAMXG00000040487) gig2o (ENSAMXG00000025547) snx19a (ENSAMXG00000003305) adamts15a (ENSAMXG00000029685) ADAMTS8 (ENSAMXG00000033321) zbtb44 (ENSAMXG00000003220) timm8b (ENSAMXG00000032954) BCO2 (ENSAMXG00000003177) UBASH3B (ENSAMXG00000012263) #26 f11r.1 (ENSAMXG00000042691) usf1l (ENSAMXG00000036141) ENSAMXG00000012322 TBCEL (ENSAMXG00000033112) #21 TECTA (ENSAMXG00000012346) #22 ENSAMXG00000012371 ENSAMXG00000012383 TIMM22 (ENSAMXG00000012393) ptges (ENSAMXG00000040752) ENSAMXG00000043964 usp20 (ENSAMXG00000012425) zgc:103692 (ENSAMXG00000012482) med22 (ENSAMXG00000038059) rpl7a (ENSAMXG00000012525) surf1 (ENSAMXG00000012501) surf6 (ENSAMXG00000012546) kyat1 (ENSAMXG00000012558) prkaa1 (ENSAMXG00000037858) ENSAMXG00000033982 ENSAMXG00000037089 Electric eel MODERN SPECIES 29 atf5a (ENSEEEG00000014557) stk36 (ENSEEEG00000014559) zgc:158412 (ENSEEEG00000014561) gig2o (ENSEEEG00000014562) ENSEEEG00000014565 adamts15a (ENSEEEG00000014571) ADAMTS8 (ENSEEEG00000014576) zbtb44 (ENSEEEG00000014662) timm8b (ENSEEEG00000014664) BCO2 (ENSEEEG00000014676) UBASH3B (ENSEEEG00000014808) #26 f11r.1 (ENSEEEG00000014851) usf1l (ENSEEEG00000014855) ENSEEEG00000014857 TBCEL (ENSEEEG00000014860) #21 TECTA (ENSEEEG00000014863) #22 ENSEEEG00000014866 ENSEEEG00000014867 ENSEEEG00000014964 TIMM22 (ENSEEEG00000014966) ptges (ENSEEEG00000014967) usp20 (ENSEEEG00000014969) zgc:103692 (ENSEEEG00000014971) med22 (ENSEEEG00000014972) RPL7A (ENSEEEG00000014979) surf1 (ENSEEEG00000014996) surf6 (ENSEEEG00000014997) kyat1 (ENSEEEG00000014998) prkaa1 (ENSEEEG00000015011) ENSEEEG00000015021 ENSEEEG00000015040 Cyprinoidei ANCESTRAL SPECIES 37 ENSGT00390000018059.a.a ENSGT00940000159734 ENSGT00940000154416.C.c.a.a.b ENSGT00940000181328 ENSGT00940000155214.k.b ENSGT00440000039084.a.a ENSGT00530000064123.h ENSGT00940000156744.p ENSGT00940000161616.c ENSGT00940000155670 ENSGT00940000155434 ENSGT00940000155178 ENSGT00940000155591.i ENSGT00940000159729 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 ENSGT00940000153592.B.a ENSGT01030000234555.a.a.a.c.a ENSGT00390000017523 ENSGT00950000183135.A.a ENSGT00940000153491.b.b.a ENSGT00390000001189.a ENSGT00990000210050 ENSGT00390000017214 ENSGT00390000018151 ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00940000175063 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 21 ENSGT00940000154667.a.x.a ENSGT00940000155917.cb.b ENSGT01030000234570.d.b.a.b.a.d.a.d ENSGT00940000156654.i.a ENSGT00940000154416.C.c.a.a.b.d ENSGT00940000155214.k.b.k ENSGT00440000039084.a.a ENSGT00530000064123.h.a.b ENSGT00940000161616.c.j.b.a ENSGT00940000155670.f ENSGT00940000155434.k.a ENSGT00940000155178.j.a ENSGT00940000155591.i.h ENSGT00940000159729.h ENSGT00530000063405.b.f.c #21 ENSGT00950000183155.a.a.a.b.a #22 ENSGT00940000155545.b.d.b ENSGT01010000222313.A.b.b.b.a.c ENSGT00390000016067.o ENSGT00940000153592.B.a.bb ENSGT01030000234555.a.a.a.c.a.h ENSGT01030000234555.a.a.a.c.a.g ENSGT00390000017523 ENSGT00950000183135.A.a.o ENSGT00990000205129 ENSGT00940000153491.b.b.a.g.a ENSGT00390000001189.a.b ENSGT00390000017214 ENSGT00390000018151.e ENSGT00990000203589.a.a.d ENSGT00390000015077.h Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154667.a.x.a ENSGT00940000155917.cb.b ENSGT01030000234570.d.b.a.b.a.d.a.d ENSGT00940000156654.i.a ENSGT00940000154416.C.c.a.a.b.d ENSGT00940000155214.k.b.k ENSGT00440000039084.a.a ENSGT00530000064123.h.a.b ENSGT00940000161616.c.j.b.a ENSGT00940000155670.f ENSGT00940000155434.k.a ENSGT00940000155178.j.a ENSGT00940000155591.i.h ENSGT00940000159729.h ENSGT00530000063405.b.f.c #21 ENSGT00950000183155.a.a.a.b.a #22 ENSGT00940000155545.b.c ENSGT01010000222313.A.b.b.b.a.c ENSGT00390000016067.o ENSGT00940000153592.B.a.bb ENSGT01030000234555.a.a.a.c.a.h ENSGT00390000017523.d ENSGT00950000183135.A.a.p ENSGT00940000153491.b.b.a.g.b ENSGT00390000001189.a.a ENSGT00990000210050 ENSGT00970000197451 ENSGT00990000203589.a.a.c ENSGT00390000015077.g ENSGT00940000175063 ENSGT00940000159256.o.o.a Common carp reference MODERN SPECIES 15 ENSCCRG00000076454 ak5l (ENSCCRG00000032721) pappab (ENSCCRG00000032966) ENSCCRG00000071099 ENSCCRG00000013673 dnm1b (ENSCCRG00000013708) ciz1b (ENSCCRG00000014614) surf4l (ENSCCRG00000014626) prdm12b (ENSCCRG00000065826) ENSCCRG00000041172 CNTRL (ENSCCRG00000042195) rab14 (ENSCCRG00000064670) gsnb (ENSCCRG00000026232) ENSCCRG00000057895 ENSCCRG00000073860 #21 ENSCCRG00000031175 #22 ENSCCRG00000042434 ENSCCRG00000070097 adora2b (ENSCCRG00000063856) zswim7 (ENSCCRG00000014889) ENSCCRG00000054716 ENSCCRG00000043369 ENSCCRG00000046296 aspa (ENSCCRG00000052787) ENSCCRG00000074738 ENSCCRG00000071106 ENSCCRG00000060567 ENSCCRG00000082713 ENSCCRG00000062815 ENSCCRG00000007726 EHD2 (ENSCCRG00000014928) Golden-line barbel MODERN SPECIES 202 ak5l (ENSSGRG00000010393) cmlc1 (ENSSGRG00000010392) pappab (ENSSGRG00000010375) ENSSGRG00000010373 ENSSGRG00000010369 dnm1b (ENSSGRG00000009747) ENSSGRG00000009743 ciz1b (ENSSGRG00000009742) prdm12b (ENSSGRG00000009741) ENSSGRG00000009740 ENSSGRG00000009738 rab14 (ENSSGRG00000009706) gsnb (ENSSGRG00000008720) ENSSGRG00000008706 TBCEL (ENSSGRG00000008704) #21 TECTA (ENSSGRG00000008683) #22 ENSSGRG00000008678 TIMM22 (ENSSGRG00000008672) SPECC1 (ENSSGRG00000008669) adora2b (ENSSGRG00000008667) ENSSGRG00000008665 ENSSGRG00000008663 ABR (ENSSGRG00000005790) aspa (ENSSGRG00000005755) ENSSGRG00000005754 zgc:85789 (ENSSGRG00000005753) ENSSGRG00000005739 ENSSGRG00000005735 ENSSGRG00000005733 AKAP10 (ENSSGRG00000005599) ENSSGRG00000005593 Goldfish MODERN SPECIES 23 QSOX2 (ENSCARG00000006712) ENSCARG00000006862 ak5l (ENSCARG00000006871) cmlc1 (ENSCARG00000006892) pappab (ENSCARG00000006927) ENSCARG00000007367 dnm1b (ENSCARG00000007543) ciz1b (ENSCARG00000010222) surf4l (ENSCARG00000010239) prdm12b (ENSCARG00000010264) ENSCARG00000010314 ENSCARG00000010334 rab14 (ENSCARG00000010341) gsnb (ENSCARG00000010407) TBCEL (ENSCARG00000011662) #21 TECTA (ENSCARG00000011687) #22 ENSCARG00000012032 ENSCARG00000012299 TIMM22 (ENSCARG00000012305) SPECC1 (ENSCARG00000012318) adora2b (ENSCARG00000012331) ENSCARG00000012339 ENSCARG00000012352 ABR (ENSCARG00000012507) aspa (ENSCARG00000016584) ENSCARG00000016597 ENSCARG00000016603 ENSCARG00000016614 ENSCARG00000016626 ENSCARG00000016632 AKAP10 (ENSCARG00000016645) Cyprininae ANCESTRAL SPECIES 183 ENSGT00940000159734.g.a ENSGT00940000154667.a.x.b ENSGT00940000155917.cb.a ENSGT01030000234570.d.b.a.b.a.d.a.c ENSGT00940000156654.i.b ENSGT00940000154416.C.c.a.a.b.c ENSGT00940000155214.k.b.l ENSGT00530000064123.h.a.a ENSGT00940000161616.c.j.b.b ENSGT00940000155670.e ENSGT00940000155434.k.b ENSGT00940000155178.j.b ENSGT00940000155591.i.g ENSGT00940000159729.g ENSGT00530000063405.b.f.d #21 ENSGT00950000183155.a.a.a.b.b #22 ENSGT00940000155545.b.d.a ENSGT01010000222313.A.b.b.b.a.d ENSGT00390000016067.p ENSGT00940000153592.B.a.cb Cyprininae_a ANCESTRAL SPECIES 75 ENSGT00940000159734.g.a ENSGT00940000154667.a.x.b ENSGT00940000155917.cb.a ENSGT01030000234570.d.b.a.b.a.d.a.c ENSGT00940000156654.i.b ENSGT00940000154416.C.c.a.a.b.c ENSGT00940000155214.k.b.l ENSGT00530000064123.h.a.a ENSGT00940000161616.c.j.b.b ENSGT00940000155670.e ENSGT00940000155434.k.b ENSGT00940000155178.j.b ENSGT00940000155591.i.g ENSGT00940000159729.g ENSGT00530000063405.b.f.d #21 ENSGT00950000183155.a.a.a.b.b #22 ENSGT00940000155545.b.d.a ENSGT01010000222313.A.b.b.b.a.d ENSGT00390000016067.p ENSGT00940000153592.B.a.cb ENSGT01030000234555.a.a.a.c.a.g ENSGT00390000017523.c ENSGT00950000183135.A.a.o ENSGT00990000205129 ENSGT00940000153491.b.b.a.g.a ENSGT00390000001189.a.b ENSGT00390000017214 ENSGT00390000018151.e ENSGT00990000203589.a.a.d ENSGT00390000015077.h ENSGT00940000161069.a.a Golden-line barbel MODERN SPECIES 94 QSOX2 (ENSSGRG00000028065) ENSSGRG00000028164 ak5l (ENSSGRG00000028166) cmlc1 (ENSSGRG00000028169) pappab (ENSSGRG00000028171) ENSSGRG00000028172 dnm1b (ENSSGRG00000028191) prdm12b (ENSSGRG00000028396) ENSSGRG00000028398 CNTRL (ENSSGRG00000028420) rab14 (ENSSGRG00000028422) gsnb (ENSSGRG00000028505) ENSSGRG00000028758 ENSSGRG00000028760 #21 TBCEL (ENSSGRG00000028762) #21 TECTA (ENSSGRG00000028764) #22 ENSSGRG00000028768 ENSSGRG00000028962 TIMM22 (ENSSGRG00000028964) SPECC1 (ENSSGRG00000028965) adora2b (ENSSGRG00000028966) zswim7 (ENSSGRG00000028969) ENSSGRG00000028998 aspa (ENSSGRG00000031150) zgc:85789 (ENSSGRG00000031159) ENSSGRG00000031192 ENSSGRG00000031193 ENSSGRG00000031195 AKAP10 (ENSSGRG00000031205) selenow1 (ENSSGRG00000031271) EHD2 (ENSSGRG00000031275) Common carp reference MODERN SPECIES 7 ak5l (ENSCCRG00000013667) pappab (ENSCCRG00000021074) ENSCCRG00000035913 dnm1b (ENSCCRG00000065243) surf4l (ENSCCRG00000002039) prdm12b (ENSCCRG00000017042) ENSCCRG00000061068 ENSCCRG00000068711 ENSCCRG00000019087 ENSCCRG00000026198 CNTRL (ENSCCRG00000053196) rab14 (ENSCCRG00000042187) gsnb (ENSCCRG00000041230) ENSCCRG00000026371 ENSCCRG00000054381 #21 ENSCCRG00000026398 #22 ENSCCRG00000014729 ENSCCRG00000063549 ENSCCRG00000080638 ENSCCRG00000014880 zswim7 (ENSCCRG00000066509) ENSCCRG00000014926 ENSCCRG00000014932 ENSCCRG00000047806 aspa (ENSCCRG00000066540) zgc:85789 (ENSCCRG00000025392) ENSCCRG00000025384 ENSCCRG00000076793 ENSCCRG00000014943 selenow1 (ENSCCRG00000014951) ENSCCRG00000072568 Goldfish MODERN SPECIES 44 pappab (ENSCARG00000013055) ENSCARG00000013176 dnm1b (ENSCARG00000013285) surf4l (ENSCARG00000015088) prdm12b (ENSCARG00000015170) ENSCARG00000015262 ENSCARG00000015863 ENSCARG00000015866 ENSCARG00000015874 ENSCARG00000015913 ENSCARG00000015938 rab14 (ENSCARG00000015972) gsnb (ENSCARG00000016069) ttf1.1 (ENSCARG00000017165) TBCEL (ENSCARG00000017227) #21 TECTA (ENSCARG00000017275) #22 ENSCARG00000017650 ENSCARG00000017983 hmgcra (ENSCARG00000017999) ankrd31 (ENSCARG00000018048) gcnt4a (ENSCARG00000018059) pomt1 (ENSCARG00000018150) CARD9 (ENSCARG00000020060) ubac1 (ENSCARG00000020087) ENSCARG00000020132 rasgrf2b (ENSCARG00000020171) otpb (ENSCARG00000020358) ENSCARG00000020375 lhfpl2b (ENSCARG00000020383) homer1b (ENSCARG00000020404) tent2 (ENSCARG00000020578) Zebrafish MODERN SPECIES 20 dnm1b (ENSDARG00000009281) ciz1b (ENSDARG00000089461) surf4l (ENSDARG00000035131) prdm12b (ENSDARG00000007430) ENSDARG00000021004 ENSDARG00000088492 rab14 (ENSDARG00000074246) ttf1.2 (ENSDARG00000093999) ttf1.1 (ENSDARG00000091967) ENSDARG00000093403 ENSDARG00000094043 ENSDARG00000092508 gsnb (ENSDARG00000045262) ENSDARG00000094107 TBCEL (ENSDARG00000019525) #21 TECTA (ENSDARG00000059558) #22 ENSDARG00000074120 ENSDARG00000114187 ENSDARG00000098860 TIMM22 (ENSDARG00000091413) SPECC1 (ENSDARG00000029480) adora2b (ENSDARG00000002533) zswim7 (ENSDARG00000067608) ENSDARG00000116802 abr (ENSDARG00000095180) ABR (ENSDARG00000059587) aspa (ENSDARG00000005154) pho (ENSDARG00000035133) C5H11orf54 (ENSDARG00000110147) ENSDARG00000098537 ENSDARG00000094587 Euteleosteomorpha ANCESTRAL SPECIES 254 ENSGT00940000166058 ENSGT00390000006114 ENSGT00530000063405.b.f #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT01030000234886.e.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a Protacanthopterygii ANCESTRAL SPECIES 180 ENSGT00940000166058 ENSGT00390000006114 ENSGT00530000063405.b.f #21 ENSGT00960000189385 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.c.a ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 35 ENSGT00390000007799 ENSGT00940000159111.j #20 ENSGT00940000157662.g.a.b #19 ENSGT00390000008162.e #18 ENSGT00940000157627.e #17 ENSGT00390000012008.a.c #16 ENSGT00940000155587.a.a.a ENSGT00940000158657.g ENSGT00500000044966 ENSGT01100000263551.a.a.c ENSGT00940000177774 ENSGT00800000125277 ENSGT00390000006659.db ENSGT00390000000083.b ENSGT00530000063405.b.f.e #21 ENSGT00950000183155.a.a.a.b.c #22 ENSGT00940000155545.b.f ENSGT01010000222313.A.b.b.b.a.e ENSGT00940000154495.a.b.a ENSGT00940000153571.a.h ENSGT00940000161370.b ENSGT00820000127055.a.b.b ENSGT01090000260061.c.b.id.b ENSGT00940000155677.b.i.a ENSGT00940000159782.b.a ENSGT00940000156648.c.a.a ENSGT00940000156536.e.a.g ENSGT00390000009497.a.c ENSGT00940000155350.h.c ENSGT00940000156251.b.b ENSGT00530000063816.c.a Salmoninae_a ANCESTRAL SPECIES 44 ENSGT00390000007799 ENSGT00940000159111.j #20 ENSGT00940000157662.g.a.b #19 ENSGT00390000008162.e #18 ENSGT00940000157627.e #17 ENSGT00390000012008.a.c #16 ENSGT00940000155587.a.a.a ENSGT00940000158657.g ENSGT00500000044966 ENSGT01100000263551.a.a.c ENSGT00940000177774 ENSGT00800000125277 ENSGT00390000006659.db ENSGT00390000000083.b ENSGT00530000063405.b.f.e #21 ENSGT00950000183155.a.a.a.b.c #22 ENSGT00940000155545.b.f ENSGT01010000222313.A.b.b.b.a.e ENSGT00940000154495.a.b.a ENSGT00940000153571.a.h ENSGT00940000161370.b ENSGT00820000127055.a.b.b ENSGT01090000260061.c.b.id.b ENSGT00940000155677.b.i.a ENSGT00940000159782.b.a ENSGT00940000156648.c.a.a ENSGT00940000156536.e.a.g ENSGT00390000009497.a.c ENSGT00940000155350.h.c ENSGT00940000156251.b.b ENSGT00530000063816.c.a Salmo ANCESTRAL SPECIES 17 ENSGT00390000007799 ENSGT00940000159111.j #20 ENSGT00940000157662.g.a.b #19 ENSGT00390000008162.e #18 ENSGT00940000157627.e #17 ENSGT00390000012008.a.c #16 ENSGT00940000155587.a.a.a ENSGT00940000158657.g ENSGT00500000044966 ENSGT01100000263551.a.a.c ENSGT00940000177774 ENSGT00800000125277 ENSGT00390000006659.db ENSGT00390000000083.b ENSGT00530000063405.b.f.e #21 ENSGT00950000183155.a.a.a.b.c #22 ENSGT00940000155545.b.f ENSGT01010000222313.A.b.b.b.a.e ENSGT00940000154495.a.b.a ENSGT00940000153571.a.h ENSGT00820000127055.a.b.b ENSGT01090000260061.c.b.id.b ENSGT00940000155677.b.i.a ENSGT00940000159782.b.a ENSGT00940000156648.c.a.a ENSGT00940000156536.e.a.g ENSGT00390000009497.a.c ENSGT00940000155350.h.c ENSGT00940000156251.b.b ENSGT00530000063816.c.a ENSGT00390000010063.pb River trout MODERN SPECIES 10 cenatac (ENSSTUG00000038625) GRIK4 (ENSSTUG00000038662) #20 ARHGEF12 (ENSSTUG00000038759) #19 tlcd5b (ENSSTUG00000039036) #18 pou2f3 (ENSSTUG00000039049) #17 OAF (ENSSTUG00000039059) #16 ENSSTUG00000039098 slc37a2 (ENSSTUG00000039367) ENSSTUG00000041508 HEPACAM (ENSSTUG00000041533) ENSSTUG00000041548 ENSSTUG00000041571 tiprl (ENSSTUG00000041580) riox2 (ENSSTUG00000041613) TBCEL (ENSSTUG00000041639) #21 TECTA (ENSSTUG00000041688) #22 ENSSTUG00000042512 ENSSTUG00000042599 ENSSTUG00000042615 POLDIP2 (ENSSTUG00000042758) ENSSTUG00000042909 ywhae2 (ENSSTUG00000042940) gria4b (ENSSTUG00000043268) elmod1 (ENSSTUG00000044172) CUL5 (ENSSTUG00000044214) CAPN5 (ENSSTUG00000044359) ompb (ENSSTUG00000044427) MYO7A (ENSSTUG00000044508) ENSSTUG00000046332 ENSSTUG00000046345 ENSSTUG00000046355 Atlantic salmon MODERN SPECIES 23 GRIK4 (ENSSSAG00000040220) #20 ARHGEF12 (ENSSSAG00000039510) #19 tlcd5b (ENSSSAG00000084363) #18 ENSSSAG00000084996 pou2f3 (ENSSSAG00000039114) #17 OAF (ENSSSAG00000118800) #16 ENSSSAG00000037950 ENSSSAG00000009351 ENSSSAG00000090678 ENSSSAG00000009095 NEUG (ENSSSAG00000009082) ENSSSAG00000089371 ENSSSAG00000112858 ENSSSAG00000088812 mina (ENSSSAG00000008878) ENSSSAG00000086558 #22 ENSSSAG00000008532 ENSSSAG00000106256 ENSSSAG00000099779 ENSSSAG00000008509 ENSSSAG00000008487 ENSSSAG00000120351 ENSSSAG00000116408 ENSSSAG00000080079 ENSSSAG00000105016 ENSSSAG00000095358 gria4b (ENSSSAG00000104085) ENSSSAG00000108261 ENSSSAG00000001489 ENSSSAG00000116155 ompb (ENSSSAG00000001217) Oncorhynchus ANCESTRAL SPECIES 41 ENSGT00390000007799 ENSGT00940000159111.j #20 ENSGT00940000157662.g.a.b #19 ENSGT00390000008162.e #18 ENSGT00940000157627.e #17 ENSGT00390000012008.a.c #16 ENSGT00940000155587.a.a.a ENSGT00940000158657.g ENSGT00500000044966 ENSGT01100000263551.a.a.c ENSGT00940000177774 ENSGT00800000125277 ENSGT00390000006659.db ENSGT00390000000083.b ENSGT00530000063405.b.f.e #21 ENSGT00950000183155.a.a.a.b.c #22 ENSGT00940000155545.b.f ENSGT01010000222313.A.b.b.b.a.e ENSGT00940000154495.a.b.a ENSGT00940000153571.a.h ENSGT00940000161370.b ENSGT00820000127055.a.b.b ENSGT01090000260061.c.b.id.b ENSGT00940000155677.b.i.a ENSGT00940000159782.b.a ENSGT00940000156648.c.a.a ENSGT00940000156536.e.a.g ENSGT00940000155350.h.c ENSGT00940000156251.b.b ENSGT00530000063816.c.a ENSGT00390000010063.pb.a Oncorhynchus_a ANCESTRAL SPECIES 43 ENSGT00940000159111.j #20 ENSGT00970000193754.a.a ENSGT00940000157662.g.a.b #19 ENSGT00390000008162.e #18 ENSGT00940000157627.e #17 ENSGT00390000012008.a.c #16 ENSGT00940000155587.a.a.a ENSGT00940000158657.g ENSGT00500000044966 ENSGT01100000263551.a.a.c ENSGT00940000177774 ENSGT00800000125277 ENSGT00390000006659.db ENSGT00390000000083.b ENSGT00530000063405.b.f.e #21 ENSGT00950000183155.a.a.a.b.c #22 ENSGT00940000155545.b.f ENSGT00940000161289.n.a.b #12 ENSGT01010000222313.A.b.b.b.a.e ENSGT00940000154495.a.b.a ENSGT00940000153571.a.h ENSGT00940000161370.b ENSGT00820000127055.a.b.b ENSGT01090000260061.c.b.id.b ENSGT00940000155677.b.i.a ENSGT00940000159782.b.a ENSGT00940000156648.c.a.a ENSGT00940000156536.e.a.g ENSGT00940000155350.h.c ENSGT00940000156251.b.b ENSGT00530000063816.c.a Coho salmon MODERN SPECIES 20 GRIK4 (ENSOKIG00005026573) #20 ENSOKIG00005026560 ARHGEF12 (ENSOKIG00005026411) #19 tlcd5b (ENSOKIG00005026381) #18 pou2f3 (ENSOKIG00005026363) #17 OAF (ENSOKIG00005026349) #16 ENSOKIG00005026152 slc37a2 (ENSOKIG00005024266) ENSOKIG00005024178 ENSOKIG00005024167 ENSOKIG00005024159 ENSOKIG00005024145 tiprl (ENSOKIG00005024121) riox2 (ENSOKIG00005024114) TBCEL (ENSOKIG00005024097) #21 TECTA (ENSOKIG00005023526) #22 ENSOKIG00005023383 ENSOKIG00005023343 POLDIP2 (ENSOKIG00005023285) LRRC75A (ENSOKIG00005023242) CRK (ENSOKIG00005023227) ENSOKIG00005023163 ENSOKIG00005023153 gria4b (ENSOKIG00005021164) elmod1 (ENSOKIG00005020974) CUL5 (ENSOKIG00005020220) CAPN5 (ENSOKIG00005048805) MYO7A (ENSOKIG00005047699) GDPD4 (ENSOKIG00005047456) ENSOKIG00005047437 ENSOKIG00005047419 Chinook salmon MODERN SPECIES 23 GRIK4 (ENSOTSG00005036320) #20 ENSOTSG00005036324 ARHGEF12 (ENSOTSG00005036326) #19 ENSOTSG00005036328 tlcd5b (ENSOTSG00005036330) #18 pou2f3 (ENSOTSG00005036331) #17 ENSOTSG00005036336 ENSOTSG00005036349 ENSOTSG00005036612 HEPACAM (ENSOTSG00005036614) ENSOTSG00005036617 ENSOTSG00005036620 tiprl (ENSOTSG00005036624) riox2 (ENSOTSG00005036627) TBCEL (ENSOTSG00005036631) #21 TECTA (ENSOTSG00005036633) #22 USP2 (ENSOTSG00005036637) #12 ENSOTSG00005036639 ENSOTSG00005036641 LRRC75A (ENSOTSG00005036645) ENSOTSG00005036649 ywhae2 (ENSOTSG00005036653) gria4b (ENSOTSG00005036677) elmod1 (ENSOTSG00005038210) CUL5 (ENSOTSG00005038212) CAPN5 (ENSOTSG00005038217) ENSOTSG00005038291 MYO7A (ENSOTSG00005038307) GDPD4 (ENSOTSG00005038471) ENSOTSG00005038473 ENSOTSG00005038474 Rainbow trout MODERN SPECIES 1 ARHGEF12 (ENSOMYG00000033234) #19 tlcd5b (ENSOMYG00000033341) #18 pou2f3 (ENSOMYG00000033350) #17 OAF (ENSOMYG00000033358) #16 ENSOMYG00000033399 slc37a2 (ENSOMYG00000033593) ENSOMYG00000034457 ENSOMYG00000034466 ENSOMYG00000063258 ENSOMYG00000034476 ENSOMYG00000034500 ENSOMYG00000034516 ENSOMYG00000034547 ENSOMYG00000077253 ENSOMYG00000034583 #21 ENSOMYG00000034687 #22 ENSOMYG00000034836 ENSOMYG00000034858 ENSOMYG00000034867 ENSOMYG00000034898 ENSOMYG00000034951 ENSOMYG00000001569 ENSOMYG00000001718 gria4b (ENSOMYG00000002271) ENSOMYG00000002427 elmod1 (ENSOMYG00000072212) ENSOMYG00000002671 CAPN5 (ENSOMYG00000002761) MYO7A (ENSOMYG00000004362) GDPD4 (ENSOMYG00000005865) ENSOMYG00000060615 Huchen MODERN SPECIES 692 ENSHHUG00000036112 ENSHHUG00000036172 ENSHHUG00000036762 HEPACAM (ENSHHUG00000036771) ENSHHUG00000036773 ENSHHUG00000036775 tiprl (ENSHHUG00000036787) riox2 (ENSHHUG00000036795) TBCEL (ENSHHUG00000036810) #21 TECTA (ENSHHUG00000036814) #22 ENSHHUG00000036825 ENSHHUG00000036842 ENSHHUG00000036846 POLDIP2 (ENSHHUG00000036862) ENSHHUG00000036885 PRKCB (ENSHHUG00000036892) Salmoninae ANCESTRAL SPECIES 348 ENSGT00530000063405.b.f.f #21 ENSGT00950000183155.a.a.a.b.d #22 ENSGT00940000155545.b.e ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000154495.a.b.b ENSGT00820000127055.a.b.a ENSGT01090000260061.c.b.id.a ENSGT00940000155677.b.j ENSGT00940000155677.b.i.b ENSGT00940000159782.b.b ENSGT00390000015655.a.m.b ENSGT00940000156648.c.a.b ENSGT00390000009497.a.d ENSGT00940000156536.e.a.h ENSGT00940000155350.h.d ENSGT00940000156251.b.a ENSGT00530000064411.b.f Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00390000006208.a.j ENSGT00940000157317.n ENSGT00940000160014.c ENSGT00940000162993 ENSGT00940000157662.g.a.a #19 ENSGT00940000157627.f #17 ENSGT00390000012008.a.d #16 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b ENSGT00940000158657.h ENSGT01100000263551.a.a.d ENSGT00440000039324.d ENSGT00390000006659.eb ENSGT00950000183127.c.b.d.a.a.b.j ENSGT00940000161847.b.a.e.a.b.a.a ENSGT00530000063405.b.f.f #21 ENSGT00950000183155.a.a.a.b.d #22 ENSGT00940000155545.b.e ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000154495.a.b.b ENSGT00820000127055.a.b.a ENSGT01090000260061.c.b.id.a ENSGT00940000155677.b.i.b ENSGT00940000159782.b.b ENSGT00390000015655.a.m.b ENSGT00940000156648.c.a.b ENSGT00390000009497.a.d ENSGT00940000156536.e.a.h ENSGT00940000155350.h.d ENSGT00940000156251.b.a ENSGT00530000064411.b.f ENSGT00390000008610.a.b.b.a.a.a Salmo ANCESTRAL SPECIES 44 ENSGT00390000006208.a.j ENSGT00940000157317.n ENSGT00940000160014.c ENSGT00940000162993 ENSGT00940000157662.g.a.a #19 ENSGT00940000157627.f #17 ENSGT00390000012008.a.d #16 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b ENSGT00940000158657.h ENSGT01100000263551.a.a.d ENSGT00440000039324.d ENSGT00390000006659.eb ENSGT00950000183127.c.b.d.a.a.b.j ENSGT00940000161847.b.a.e.a.b.a.a ENSGT00530000063405.b.f.f #21 ENSGT00950000183155.a.a.a.b.d #22 ENSGT00940000155545.b.e ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000154495.a.b.b ENSGT00820000127055.a.b.a ENSGT01090000260061.c.b.id.a ENSGT00940000155677.b.i.b ENSGT00940000159782.b.b ENSGT00390000015655.a.m.b ENSGT00940000156648.c.a.b ENSGT00940000156536.e.a.h ENSGT00390000009497.a.d ENSGT00940000155350.h.d ENSGT00940000156251.b.a ENSGT00530000064411.b.f ENSGT00390000008610.a.b.b.a.a.a River trout MODERN SPECIES 6 rcc1l (ENSSTUG00000007903) ncf1 (ENSSTUG00000007926) ENSSTUG00000007942 foxr1 (ENSSTUG00000007945) ARHGEF12 (ENSSTUG00000007969) #19 pou2f3 (ENSSTUG00000008413) #17 OAF (ENSSTUG00000008445) #16 ENSSTUG00000008452 slc37a2 (ENSSTUG00000008490) HEPACAM (ENSSTUG00000009770) nrgna (ENSSTUG00000009773) tiprl (ENSSTUG00000009775) ENSSTUG00000009777 ENSSTUG00000009784 TBCEL (ENSSTUG00000009796) #21 TECTA (ENSSTUG00000009831) #22 ENSSTUG00000009880 ENSSTUG00000010056 ENSSTUG00000010061 CRK (ENSSTUG00000010068) ENSSTUG00000010083 gria4b (ENSSTUG00000010114) elmod1 (ENSSTUG00000010184) slc35f2 (ENSSTUG00000010209) CUL5 (ENSSTUG00000010323) CAPN5 (ENSSTUG00000011086) ompb (ENSSTUG00000011199) ENSSTUG00000011237 ENSSTUG00000011254 ENSSTUG00000011270 FCHSD2 (ENSSTUG00000011322) Atlantic salmon MODERN SPECIES 4 castor2 (ENSSSAG00000079805) ENSSSAG00000079823 SPD2A (ENSSSAG00000079828) ENSSSAG00000085859 ARHGEF12 (ENSSSAG00000079843) #19 pou2f3 (ENSSSAG00000079857) #17 OAF (ENSSSAG00000120874) #16 ENSSSAG00000101698 slc37a2 (ENSSSAG00000079891) ENSSSAG00000079987 nrgna (ENSSSAG00000079991) tiprl (ENSSSAG00000079993) ENSSSAG00000080001 ENSSSAG00000080003 ENSSSAG00000080005 #21 ENSSSAG00000094258 #22 ENSSSAG00000080069 ENSSSAG00000087040 ENSSSAG00000080074 ENSSSAG00000080076 ENSSSAG00000008422 gria4b (ENSSSAG00000104016) elmod1 (ENSSSAG00000080315) slc35f2 (ENSSSAG00000080322) ENSSSAG00000121221 ENSSSAG00000001142 ompb (ENSSSAG00000080367) MYO7A (ENSSSAG00000080375) ENSSSAG00000080446 ENSSSAG00000103892 ENSSSAG00000080449 Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00390000006208.a.j ENSGT00940000157317.n ENSGT00940000160014.c ENSGT00940000162993 ENSGT00940000157662.g.a.a #19 ENSGT00940000157627.f #17 ENSGT00390000012008.a.d #16 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b ENSGT00940000158657.h ENSGT01100000263551.a.a.d ENSGT00440000039324.d ENSGT00390000006659.eb ENSGT00950000183127.c.b.d.a.a.b.j ENSGT00940000161847.b.a.e.a.b.a.a ENSGT00530000063405.b.f.f #21 ENSGT00950000183155.a.a.a.b.d #22 ENSGT00940000155545.b.e ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000154495.a.b.b ENSGT00820000127055.a.b.a ENSGT01090000260061.c.b.id.a ENSGT00940000155677.b.j ENSGT00940000155677.b.i.b ENSGT00940000159782.b.b ENSGT00390000015655.a.m.b ENSGT00940000156648.c.a.b ENSGT00390000009497.a.d ENSGT00940000156536.e.a.h ENSGT00940000155350.h.d ENSGT00940000156251.b.a ENSGT00530000064411.b.f Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000157317.n ENSGT00940000160014.c ENSGT01000000222024 ENSGT00940000162993 ENSGT00940000157662.g.a.a #19 ENSGT00940000157627.f #17 ENSGT00390000012008.a.d #16 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b ENSGT00940000158657.h ENSGT01100000263551.a.a.d ENSGT00440000039324.d ENSGT00390000006659.eb ENSGT00950000183127.c.b.d.a.a.b.j ENSGT00940000161847.b.a.e.a.b.a.a ENSGT00530000063405.b.f.f.a #21 ENSGT00950000183155.a.a.a.b.d #22 ENSGT00940000155545.b.e ENSGT01010000222313.A.b.b.b.a.f ENSGT00940000154495.a.b.b ENSGT00820000127055.a.b.a ENSGT01090000260061.c.b.id.a ENSGT00940000155677.b.j ENSGT00940000159782.b.b ENSGT00390000015655.a.m.b ENSGT00940000156648.c.a.b ENSGT00390000009497.a.d ENSGT00940000156536.e.a.h ENSGT00940000155350.h.d ENSGT00940000156251.b.a ENSGT00530000064411.b.f ENSGT00390000008610.a.b.b.a.a.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 33 rcc1l (ENSOTSG00005014190) ncf1 (ENSOTSG00005014179) ENSOTSG00005014176 foxr1 (ENSOTSG00005014175) ARHGEF12 (ENSOTSG00005014167) #19 pou2f3 (ENSOTSG00005014149) #17 OAF (ENSOTSG00005014146) #16 ENSOTSG00005014143 slc37a2 (ENSOTSG00005011784) HEPACAM (ENSOTSG00005011758) nrgna (ENSOTSG00005011755) tiprl (ENSOTSG00005011754) ENSOTSG00005011752 ENSOTSG00005011750 TBCEL (ENSOTSG00005011746) #21 TECTA (ENSOTSG00005011743) #22 USP2 (ENSOTSG00005010605) #12 ENSOTSG00005010599 ENSOTSG00005010598 CRK (ENSOTSG00005010597) ENSOTSG00005010596 ENSOTSG00005010595 gria4b (ENSOTSG00005004839) slc35f2 (ENSOTSG00005004761) CUL5 (ENSOTSG00005001918) ompb (ENSOTSG00005001870) CAPN5 (ENSOTSG00005001813) MYO7A (ENSOTSG00005001742) GDPD4 (ENSOTSG00005001724) ENSOTSG00005001718 ENSOTSG00005001704 Chinook salmon MODERN SPECIES 33 rcc1l (ENSOTSG00005030557) ncf1 (ENSOTSG00005030531) ENSOTSG00005030529 foxr1 (ENSOTSG00005030528) ARHGEF12 (ENSOTSG00005030527) #19 pou2f3 (ENSOTSG00005030522) #17 OAF (ENSOTSG00005046494) #16 ENSOTSG00005046493 slc37a2 (ENSOTSG00005046472) HEPACAM (ENSOTSG00005046471) nrgna (ENSOTSG00005046470) tiprl (ENSOTSG00005046469) ENSOTSG00005046468 ENSOTSG00005046467 TBCEL (ENSOTSG00005046466) #21 TECTA (ENSOTSG00005046465) #22 USP2 (ENSOTSG00005046429) #12 ENSOTSG00005046428 ENSOTSG00005046427 ENSOTSG00005046426 ENSOTSG00005046425 gria4b (ENSOTSG00005044976) slc35f2 (ENSOTSG00005044958) CUL5 (ENSOTSG00005044924) ompb (ENSOTSG00005044916) CAPN5 (ENSOTSG00005044907) MYO7A (ENSOTSG00005044905) GDPD4 (ENSOTSG00005044903) ENSOTSG00005044901 ENSOTSG00005044899 FCHSD2 (ENSOTSG00005044891) Coho salmon MODERN SPECIES 26 ncf1 (ENSOKIG00005013312) ENSOKIG00005013284 foxr1 (ENSOKIG00005013275) ENSOKIG00005013271 ARHGEF12 (ENSOKIG00005012991) #19 pou2f3 (ENSOKIG00005012930) #17 OAF (ENSOKIG00005012924) #16 ENSOKIG00005012916 slc37a2 (ENSOKIG00005010987) HEPACAM (ENSOKIG00005010854) nrgna (ENSOKIG00005010847) TIPRL (ENSOKIG00005010840) ENSOKIG00005010598 ENSOKIG00005010556 TBCEL (ENSOKIG00005010538) #21 TECTA (ENSOKIG00005010404) #22 ENSOKIG00005010092 ENSOKIG00005010018 ENSOKIG00005010006 ENSOKIG00005009997 ENSOKIG00005009989 CRK (ENSOKIG00005009974) ywhae2 (ENSOKIG00005009953) gria4b (ENSOKIG00005006992) elmod1 (ENSOKIG00005006729) slc35f2 (ENSOKIG00005006717) CUL5 (ENSOKIG00005006577) ompb (ENSOKIG00005006540) CAPN5 (ENSOKIG00005006399) MYO7A (ENSOKIG00005006047) GDPD4 (ENSOKIG00005005929) Rainbow trout MODERN SPECIES 3 p47phox (ENSOMYG00000014111) ENSOMYG00000014057 ARHGEF12 (ENSOMYG00000013938) #19 pou2f3 (ENSOMYG00000013879) #17 OAF (ENSOMYG00000013865) #16 ENSOMYG00000013861 slc37a2 (ENSOMYG00000013693) ENSOMYG00000013619 ENSOMYG00000071149 ENSOMYG00000052060 ENSOMYG00000069267 ENSOMYG00000013600 ENSOMYG00000050316 ENSOMYG00000013581 ENSOMYG00000013575 #21 ENSOMYG00000013433 #22 ENSOMYG00000013280 #12 ENSOMYG00000013232 ENSOMYG00000013216 ENSOMYG00000013208 ENSOMYG00000013188 ENSOMYG00000066390 ENSOMYG00000013174 gria4b (ENSOMYG00000008434) elmod1 (ENSOMYG00000002471) ENSOMYG00000072496 slc35f2 (ENSOMYG00000005785) ENSOMYG00000005684 ompb (ENSOMYG00000005437) CAPN5 (ENSOMYG00000005341) ENSOMYG00000072789 Huchen MODERN SPECIES 2168 TECTA (ENSHHUG00000013801) #22 ENSHHUG00000013784 ENSHHUG00000013781 ENSHHUG00000013773 Northern pike MODERN SPECIES 6 GRIK4 (ENSELUG00000018995) #20 ARHGEF12 (ENSELUG00000018877) #19 tlcd5b (ENSELUG00000001057) #18 pou2f3 (ENSELUG00000018667) #17 OAF (ENSELUG00000018647) #16 slc37a2 (ENSELUG00000018633) ENSELUG00000018593 HEPACAM (ENSELUG00000018580) nrgna (ENSELUG00000024670) tiprl (ENSELUG00000018537) riox2 (ENSELUG00000000794) cry5 (ENSELUG00000018508) foxred1 (ENSELUG00000000789) TBCEL (ENSELUG00000018456) #21 ENSELUG00000000770 TECTA (ENSELUG00000018390) #22 ENSELUG00000018327 ENSELUG00000018288 ENSELUG00000018240 POLDIP2 (ENSELUG00000018214) CRK (ENSELUG00000018178) ENSELUG00000018168 gria4b (ENSELUG00000018146) elmod1 (ENSELUG00000018104) slc35f2 (ENSELUG00000018044) CUL5 (ENSELUG00000018014) ompb (ENSELUG00000017884) CAPN5 (ENSELUG00000017917) MYO7A (ENSELUG00000017865) GDPD4 (ENSELUG00000017779) ENSELUG00000017744 Acanthomorphata ANCESTRAL SPECIES 14 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000157641 ENSGT00940000159095 ENSGT00940000156492 ENSGT00940000153883.b ENSGT00940000156758 ENSGT00390000006208.a ENSGT00940000157317 ENSGT00390000008162.e #18 ENSGT00530000063743.b ENSGT00950000183012.B.a ENSGT00990000203615.b.b.a ENSGT00390000006114 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01030000234886.e.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Cod MODERN SPECIES 20 ENSGMOG00000024602 ENSGMOG00000006075 #23 ENSGMOG00000006069 ENSGMOG00000031628 ncam1a (ENSGMOG00000019522) zbtb16a (ENSGMOG00000012795) HTR3A (ENSGMOG00000024159) HTR3A (ENSGMOG00000012790) ENSGMOG00000012786 USP28 (ENSGMOG00000012774) ENSGMOG00000013151 ENSGMOG00000013164 ENSGMOG00000011048 ENSGMOG00000011057 ENSGMOG00000011115 #21 ENSGMOG00000011123 #22 ENSGMOG00000011147 ENSGMOG00000011162 ENSGMOG00000022235 ENSGMOG00000032933 ENSGMOG00000024669 gria4b (ENSGMOG00000000875) elmod1 (ENSGMOG00000023607) slc35f2 (ENSGMOG00000011228) ENSGMOG00000011242 CAPN5 (ENSGMOG00000011259) MYO7A (ENSGMOG00000011272) GDPD4 (ENSGMOG00000011309) ENSGMOG00000029085 DLAT (ENSGMOG00000002727) ENSGMOG00000022666 Euacanthomorphacea ANCESTRAL SPECIES 19 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01030000234886.e.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Pinecone sodierfish MODERN SPECIES 5 orai2 (ENSMMDG00005010635) USP28 (ENSMMDG00005010690) HTR3B (ENSMMDG00005014804) HTR3A (ENSMMDG00005014807) zbtb16a (ENSMMDG00005014811) ncam1a (ENSMMDG00005014838) cadm1a (ENSMMDG00005015899) sc5d (ENSMMDG00005015902) #23 plekhb1 (ENSMMDG00005015912) fam168a (ENSMMDG00005015913) ENSMMDG00005015914 ENSMMDG00005015917 ENSMMDG00005015924 TBCEL (ENSMMDG00005015925) #21 ENSMMDG00005015928 TECTA (ENSMMDG00005015931) #22 ENSMMDG00005015939 ENSMMDG00005015943 ENSMMDG00005015946 POLDIP2 (ENSMMDG00005015948) CRK (ENSMMDG00005016019) ywhae2 (ENSMMDG00005016020) gria4b (ENSMMDG00005016022) elmod1 (ENSMMDG00005016024) slc35f2 (ENSMMDG00005016026) CUL5 (ENSMMDG00005016029) CAPN5 (ENSMMDG00005016036) ompb (ENSMMDG00005016043) MYO7A (ENSMMDG00005016059) ENSMMDG00005016072 zw10 (ENSMMDG00005016076) Percomorphaceae ANCESTRAL SPECIES 40 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Tiger tail seahorse MODERN SPECIES 174 orai2 (ENSHCOG00000010251) USP28 (ENSHCOG00000010203) HTR3A (ENSHCOG00000010180) zbtb16a (ENSHCOG00000010142) ncam1a (ENSHCOG00000010107) cadm1a (ENSHCOG00000010083) sc5d (ENSHCOG00000010054) #23 plekhb1 (ENSHCOG00000010039) TBCEL (ENSHCOG00000010031) #21 TECTA (ENSHCOG00000010017) #22 USP2 (ENSHCOG00000000312) #12 ENSHCOG00000009950 ENSHCOG00000009939 CRK (ENSHCOG00000009925) ywhae2 (ENSHCOG00000009904) gria4b (ENSHCOG00000009872) elmod1 (ENSHCOG00000009827) slc35f2 (ENSHCOG00000009797) cul5a (ENSHCOG00000009785) CAPN5 (ENSHCOG00000009737) ompb (ENSHCOG00000009715) MYO7A (ENSHCOG00000009703) ENSHCOG00000009612 AQP11 (ENSHCOG00000009586) ENSHCOG00000009570 Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Zig-zag eel MODERN SPECIES 5 ENSMAMG00000002862 #8 ENSMAMG00000002831 ##7 ENSMAMG00000002825 ENSMAMG00000002695 ENSMAMG00000002659 ENSMAMG00000002642 USP28 (ENSMAMG00000002619) ENSMAMG00000002589 HTR3A (ENSMAMG00000002560) zbtb16a (ENSMAMG00000002542) ncam1a (ENSMAMG00000002392) cadm1a (ENSMAMG00000028196) SC5D (ENSMAMG00000002321) #23 ENSMAMG00000002295 ENSMAMG00000002275 #21 ENSMAMG00000002201 #22 ENSMAMG00000002185 #12 ENSMAMG00000002154 ENSMAMG00000002121 ENSMAMG00000025496 ENSMAMG00000025128 ENSMAMG00000002020 elmod1 (ENSMAMG00000001980) slc35f2 (ENSMAMG00000001954) ENSMAMG00000001854 ompb (ENSMAMG00000001842) ENSMAMG00000001817 ENSMAMG00000001667 ENSMAMG00000001646 ENSMAMG00000001623 ENSMAMG00000001547 Anabantoidei ANCESTRAL SPECIES 12 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Climbing perch MODERN SPECIES 5 ENSATEG00000001223 #8 ENSATEG00000001218 ##7 ENSATEG00000001215 ENSATEG00000001209 ENSATEG00000001167 ENSATEG00000025973 USP28 (ENSATEG00000001158) ENSATEG00000001100 HTR3A (ENSATEG00000001062) zbtb16a (ENSATEG00000001020) ncam1a (ENSATEG00000000934) cadm1a (ENSATEG00000000889) SC5D (ENSATEG00000000855) #23 ENSATEG00000000795 ENSATEG00000000785 #21 ENSATEG00000000678 #22 ENSATEG00000000617 ENSATEG00000000611 ENSATEG00000000597 ENSATEG00000000567 ENSATEG00000000528 ENSATEG00000000466 elmod1 (ENSATEG00000000421) slc35f2 (ENSATEG00000000410) ENSATEG00000000395 ompb (ENSATEG00000000380) CAPN5 (ENSATEG00000000315) MYO7A (ENSATEG00000000073) GDPD4 (ENSATEG00000000053) ENSATEG00000023313 ENSATEG00000023296 Carangaria ANCESTRAL SPECIES 16 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b.j ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Carangaria_A DUPLICATION Carangaria_A ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.b.e #22 Seriola ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.b.e #22 Yellowtail amberjack MODERN SPECIES 2995 ENSSLDG00000015109 hsc70 (ENSSLDG00000015082) ##31 ctrl (ENSSLDG00000015064) lin37 (ENSSLDG00000015031) hspb6 (ENSSLDG00000015008) psenen (ENSSLDG00000014995) ENSSLDG00000014953 ENSSLDG00000014930 ENSSLDG00000014922 ENSSLDG00000014906 APLP1 (ENSSLDG00000014881) ENSSLDG00000014853 kirrel3l (ENSSLDG00000014807) nphs1 (ENSSLDG00000014761) ENSSLDG00000014737 ENSSLDG00000014706 #22 ENSSLDG00000014681 FCGBP (ENSSLDG00000014495) ##22 ENSSLDG00000014418 ENSSLDG00000014398 ENSSLDG00000014356 ENSSLDG00000014338 ENSSLDG00000014322 csnk2a1 (ENSSLDG00000014270) ENSSLDG00000014236 pon1 (ENSSLDG00000014215) kcnk5b (ENSSLDG00000014202) ENSSLDG00000014172 csnk2b (ENSSLDG00000014149) AIF1 (ENSSLDG00000013972) ENSSLDG00000013906 Carangaria_A ANCESTRAL SPECIES 8 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b.i.a ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b.f #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Barramundi perch MODERN SPECIES 188 orai2 (ENSLCAG00010014472) USP28 (ENSLCAG00010014538) ENSLCAG00010014646 HTR3A (ENSLCAG00010014653) zbtb16a (ENSLCAG00010014654) ncam1a (ENSLCAG00010014737) cadm1a (ENSLCAG00010015019) ENSLCAG00010015027 sc5d (ENSLCAG00010015030) #23 plekhb1 (ENSLCAG00010015034) TBCEL (ENSLCAG00010015040) #21 ENSLCAG00010015044 TECTA (ENSLCAG00010015048) #22 ENSLCAG00010015084 ENSLCAG00010015209 ENSLCAG00010015212 CRK (ENSLCAG00010015215) ENSLCAG00010015233 Seriola ANCESTRAL SPECIES 2 ENSGT00950000183109.c.a.b ENSGT00940000167475 ENSGT00940000159431 ENSGT00940000163584.b.a.a ENSGT00950000182787.E.d.e.a ENSGT00390000007635 ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b.i.a ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b.f #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c.m Greater amberjack MODERN SPECIES 119 nop16 (ENSSDUG00000022349) GRK6 (ENSSDUG00000022332) ENSSDUG00000022326 DBN1 (ENSSDUG00000022321) zgc:77151 (ENSSDUG00000022313) ENSSDUG00000022108 ENSSDUG00000022063 USP28 (ENSSDUG00000022005) HTR3A (ENSSDUG00000021988) zbtb16a (ENSSDUG00000021980) ncam1a (ENSSDUG00000021944) cadm1a (ENSSDUG00000021931) sc5d (ENSSDUG00000021927) #23 plekhb1 (ENSSDUG00000021924) TBCEL (ENSSDUG00000021915) #21 TECTA (ENSSDUG00000021894) #22 ENSSDUG00000021878 ENSSDUG00000021868 ENSSDUG00000021858 CRK (ENSSDUG00000021850) ywhae2 (ENSSDUG00000021846) gria4b (ENSSDUG00000021812) Yellowtail amberjack MODERN SPECIES 2770 DBN1 (ENSSLDG00000001682) ENSSLDG00000001758 ENSSLDG00000001856 ENSSLDG00000002535 USP28 (ENSSLDG00000002564) HTR3B (ENSSLDG00000002836) HTR3A (ENSSLDG00000002895) zbtb16a (ENSSLDG00000002956) ncam1a (ENSSLDG00000003022) ENSSLDG00000003181 cadm1a (ENSSLDG00000003202) sc5d (ENSSLDG00000003252) #23 plekhb1 (ENSSLDG00000003276) TBCEL (ENSSLDG00000003290) #21 ENSSLDG00000003328 #22 ENSSLDG00000003459 ENSSLDG00000003504 ENSSLDG00000003520 CRK (ENSSLDG00000003550) ywhae2 (ENSSLDG00000003588) Pleuronectoidei ANCESTRAL SPECIES 32 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b.j ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Turbot MODERN SPECIES 16 ENSSMAG00000016652 ENSSMAG00000016529 ENSSMAG00000030699 USP28 (ENSSMAG00000016477) ENSSMAG00000016432 HTR3A (ENSSMAG00000032913) ENSSMAG00000026269 zbtb16a (ENSSMAG00000016425) ENSSMAG00000035064 ENSSMAG00000025017 ncam1a (ENSSMAG00000016392) ENSSMAG00000016380 cadm1a (ENSSMAG00000016318) ENSSMAG00000021511 #23 ENSSMAG00000013876 ENSSMAG00000013921 #22 ENSSMAG00000013979 ENSSMAG00000021497 ENSSMAG00000014013 ENSSMAG00000014033 ENSSMAG00000014051 ENSSMAG00000014088 ENSSMAG00000014153 ENSSMAG00000014180 ENSSMAG00000014223 pou4f4 (ENSSMAG00000027160) klf5l (ENSSMAG00000014441) klf8 (ENSSMAG00000031788) rbm41 (ENSSMAG00000014485) cldn2 (ENSSMAG00000014506) ENSSMAG00000014686 Tongue sole MODERN SPECIES 10 ENSCSEG00000016582 tmem120aa (ENSCSEG00000016565) ENSCSEG00000016538 #8 CBL (ENSCSEG00000016526) ##7 alkbh4 (ENSCSEG00000016518) bckdk (ENSCSEG00000016496) orai2 (ENSCSEG00000016488) USP28 (ENSCSEG00000016461) HTR3A (ENSCSEG00000016449) zbtb16a (ENSCSEG00000016440) ncam1a (ENSCSEG00000015969) cadm1a (ENSCSEG00000015889) sc5d (ENSCSEG00000015866) #23 plekhb1 (ENSCSEG00000015863) ENSCSEG00000015849 #21 TECTA (ENSCSEG00000015826) #22 ENSCSEG00000015810 ENSCSEG00000015801 ENSCSEG00000015789 CRK (ENSCSEG00000015777) ENSCSEG00000015677 gria4b (ENSCSEG00000015575) elmod1 (ENSCSEG00000015527) slc35f2 (ENSCSEG00000015491) CUL5 (ENSCSEG00000015456) ompb (ENSCSEG00000015444) CAPN5 (ENSCSEG00000015427) MYO7A (ENSCSEG00000015251) ENSCSEG00000015202 ENSCSEG00000015230 ENSCSEG00000015171 Eupercaria ANCESTRAL SPECIES 26 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Tetraodontidae ANCESTRAL SPECIES 57 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00940000154248.b ENSGT00940000160597 ENSGT00550000075141 ENSGT00390000011674 ENSGT01030000234646.A ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01090000260061.c.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00530000063816.c.a ENSGT00530000064411.b.j ENSGT00510000046732.A.c ENSGT00390000006114 ENSGT00990000203615.b.b.a Fugu MODERN SPECIES 6 CBL (ENSTRUG00000012330) ##7 lrwd1 (ENSTRUG00000012493) ENSTRUG00000030306 ddx51 (ENSTRUG00000012670) smim8 (ENSTRUG00000026822) bckdk (ENSTRUG00000012782) USP28 (ENSTRUG00000012940) ENSTRUG00000013084 HTR3A (ENSTRUG00000013117) ENSTRUG00000025710 zbtb16a (ENSTRUG00000002959) ncam1a (ENSTRUG00000002966) cadm1a (ENSTRUG00000012483) sc5d (ENSTRUG00000012442) #23 ENSTRUG00000012392 #21 TECTA (ENSTRUG00000012236) #22 ENSTRUG00000012109 ENSTRUG00000027293 CRK (ENSTRUG00000011971) ywhae2 (ENSTRUG00000030321) gria4b (ENSTRUG00000011517) elmod1 (ENSTRUG00000011350) slc35f2 (ENSTRUG00000011198) cul5a (ENSTRUG00000010860) CAPN5 (ENSTRUG00000010580) ompb (ENSTRUG00000024676) ENSTRUG00000010002 ENSTRUG00000009902 FCHSD2 (ENSTRUG00000009588) foxred1 (ENSTRUG00000009457) kcnj1b (ENSTRUG00000009385) Tetraodon MODERN SPECIES 26 ENSTNIG00000002457 ARSD (ENSTNIG00000002458) ENSTNIG00000001271 ENSTNIG00000000880 ENSTNIG00000002468 ENSTNIG00000002469 ENSTNIG00000002470 ENSTNIG00000002471 HCK (ENSTNIG00000002534) slc18a2 (ENSTNIG00000002535) PDZD8 (ENSTNIG00000000196) ATP8B1 (ENSTNIG00000002536) txnl1 (ENSTNIG00000002537) ENSTNIG00000002208 naif1 (ENSTNIG00000002538) TECTA (ENSTNIG00000002539) #22 ENSTNIG00000002545 SYDE1 (ENSTNIG00000002546) ENSTNIG00000001261 ENSTNIG00000002555 ENSTNIG00000002556 ENSTNIG00000002557 ENSTNIG00000002558 ENSTNIG00000000008 ENSTNIG00000002559 BCL6B (ENSTNIG00000002560) kcnd1 (ENSTNIG00000002565) st14b (ENSTNIG00000002566) plcb3 (ENSTNIG00000002568) HIPK1 (ENSTNIG00000002579) ube2j2 (ENSTNIG00000002580) Eupecaria_A ANCESTRAL SPECIES 25 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Ballan wrasse MODERN SPECIES 577 cadm1a (ENSLBEG00000022822) sc5d (ENSLBEG00000022801) #23 plekhb1 (ENSLBEG00000022776) TBCEL (ENSLBEG00000022755) #21 ENSLBEG00000022738 TECTA (ENSLBEG00000022703) #22 Eupecaria_B ANCESTRAL SPECIES 25 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Perciformes ANCESTRAL SPECIES 26 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Perciformes_a ANCESTRAL SPECIES 28 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Pike perch MODERN SPECIES 22 ENSSLUG00000013617 #8 CBL (ENSSLUG00000013607) ##7 alkbh4 (ENSSLUG00000013601) lrwd1 (ENSSLUG00000013581) bckdk (ENSSLUG00000013381) orai2 (ENSSLUG00000013354) USP28 (ENSSLUG00000012849) ENSSLUG00000012775 HTR3A (ENSSLUG00000012772) zbtb16a (ENSSLUG00000012764) ncam1a (ENSSLUG00000011620) cadm1a (ENSSLUG00000011243) sc5d (ENSSLUG00000011203) #23 plekhb1 (ENSSLUG00000011154) TBCEL (ENSSLUG00000011144) #21 TECTA (ENSSLUG00000011137) #22 ENSSLUG00000011130 ENSSLUG00000011121 ENSSLUG00000011113 ENSSLUG00000011107 CRK (ENSSLUG00000011101) ywhae2 (ENSSLUG00000011090) gria4b (ENSSLUG00000010926) elmod1 (ENSSLUG00000010894) slc35f2 (ENSSLUG00000010876) CUL5 (ENSSLUG00000010739) ompb (ENSSLUG00000010701) CAPN5 (ENSSLUG00000010588) MYO7A (ENSSLUG00000010473) GDPD4 (ENSSLUG00000010437) AQP11 (ENSSLUG00000010425) Channel bull blenny MODERN SPECIES 5 ENSCGOG00000002165 #8 CBL (ENSCGOG00000002179) ##7 alkbh4 (ENSCGOG00000002223) lrwd1 (ENSCGOG00000002242) orai2 (ENSCGOG00000002399) USP28 (ENSCGOG00000002448) ENSCGOG00000003633 HTR3A (ENSCGOG00000003639) zbtb16a (ENSCGOG00000003651) ncam1a (ENSCGOG00000003766) cadm1a (ENSCGOG00000006586) plekhb1 (ENSCGOG00000006629) sc5d (ENSCGOG00000006632) #23 ENSCGOG00000006640 TBCEL (ENSCGOG00000006645) #21 TECTA (ENSCGOG00000006649) #22 USP2 (ENSCGOG00000006705) #12 ENSCGOG00000006727 ENSCGOG00000006730 CRK (ENSCGOG00000006734) ywhae2 (ENSCGOG00000006754) ENSCGOG00000006848 ENSCGOG00000006854 ENSCGOG00000006874 gria4b (ENSCGOG00000006893) ENSCGOG00000008817 dtx2 (ENSCGOG00000008822) dtx2 (ENSCGOG00000008823) GTF2IRD1 (ENSCGOG00000008831) CLIP2 (ENSCGOG00000008942) klf8 (ENSCGOG00000010520) Cottioidei ANCESTRAL SPECIES 10 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000154465.C.e ENSGT00530000067490 ENSGT00940000154465.C.f ENSGT00940000154540.a Lumpfish MODERN SPECIES 5 CBL (ENSCLMG00005002297) ##7 alkbh4 (ENSCLMG00005002322) lrwd1 (ENSCLMG00005002323) bckdk (ENSCLMG00005002325) orai2 (ENSCLMG00005002492) USP28 (ENSCLMG00005002496) ENSCLMG00005002501 HTR3B (ENSCLMG00005002502) HTR3A (ENSCLMG00005002504) zbtb16a (ENSCLMG00005002505) ncam1a (ENSCLMG00005002506) cadm1a (ENSCLMG00005002511) sc5d (ENSCLMG00005002573) #23 plekhb1 (ENSCLMG00005002574) TBCEL (ENSCLMG00005002580) #21 TECTA (ENSCLMG00005002582) #22 ENSCLMG00005002584 ENSCLMG00005002591 ENSCLMG00005002592 CRK (ENSCLMG00005002594) ENSCLMG00005002597 gria4b (ENSCLMG00005002599) ENSCLMG00005002735 elmod1 (ENSCLMG00005002736) slc35f2 (ENSCLMG00005002737) CUL5 (ENSCLMG00005002738) CAPN5 (ENSCLMG00005002777) ompb (ENSCLMG00005003014) MYO7A (ENSCLMG00005003019) ENSCLMG00005003031 rabgef1 (ENSCLMG00005003042) Stickleback MODERN SPECIES 7 CBL (ENSGACG00000020763) ##7 alkbh4 (ENSGACG00000020764) lrwd1 (ENSGACG00000020765) bckdk (ENSGACG00000020766) orai2 (ENSGACG00000020767) USP28 (ENSGACG00000020768) HTR3B (ENSGACG00000020769) HTR3A (ENSGACG00000020770) zbtb16a (ENSGACG00000020771) ENSGACG00000020772 ncam1a (ENSGACG00000020773) ENSGACG00000020774 sc5d (ENSGACG00000020775) #23 plekhb1 (ENSGACG00000020776) TBCEL (ENSGACG00000020777) #21 TECTA (ENSGACG00000020778) #22 ENSGACG00000020779 ENSGACG00000020780 ENSGACG00000020781 ENSGACG00000020782 gria4b (ENSGACG00000020783) slc35f2 (ENSGACG00000020784) CUL5 (ENSGACG00000020785) CAPN5 (ENSGACG00000020786) ompb (ENSGACG00000020787) MYO7A (ENSGACG00000020788) ENSGACG00000020789 ENSGACG00000020790 ENSGACG00000020791 ENSGACG00000020792 rabgef1 (ENSGACG00000020793) Eupecaria_C ANCESTRAL SPECIES 32 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 20 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT01000000221741 ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b European seabass MODERN SPECIES 4 ENSDLAG00005011444 #8 ENSDLAG00005010994 ##7 ENSDLAG00005010976 ENSDLAG00005010912 ENSDLAG00005032202 ENSDLAG00005026494 USP28 (ENSDLAG00005009252) ENSDLAG00005009202 HTR3A (ENSDLAG00005009191) zbtb16a (ENSDLAG00005031923) ncam1a (ENSDLAG00005007552) cadm1a (ENSDLAG00005007417) SC5D (ENSDLAG00005007407) #23 ENSDLAG00005007398 ENSDLAG00005007383 #21 ENSDLAG00005007358 #22 ENSDLAG00005006899 ENSDLAG00005006884 ENSDLAG00005006871 ENSDLAG00005033831 ENSDLAG00005006495 ENSDLAG00005005016 elmod1 (ENSDLAG00005004868) slc35f2 (ENSDLAG00005004826) ENSDLAG00005029608 ENSDLAG00005030622 ompb (ENSDLAG00005030150) CAPN5 (ENSDLAG00005004342) MYO7A (ENSDLAG00005021005) ENSDLAG00005020939 GDPD4 (ENSDLAG00005020922) Large yellow croaker MODERN SPECIES 2 PRDM6 (ENSLCRG00005006178) PPIC (ENSLCRG00005006176) SNX2 (ENSLCRG00005004430) ENSLCRG00005004398 sncaip (ENSLCRG00005004396) ENSLCRG00005004395 ENSLCRG00005004319 ENSLCRG00005004317 hs3st1l2 (ENSLCRG00005004316) h2az2b (ENSLCRG00005004300) purbb (ENSLCRG00005004297) ENSLCRG00005004294 il1b (ENSLCRG00005004292) styxl1 (ENSLCRG00005004290) TBCEL (ENSLCRG00005004289) #21 TECTA (ENSLCRG00005004285) #22 ENSLCRG00005004282 ENSLCRG00005004280 ENSLCRG00005004279 CRK (ENSLCRG00005004276) ywhae2 (ENSLCRG00005004273) gria4b (ENSLCRG00005002153) elmod1 (ENSLCRG00005002125) slc35f2 (ENSLCRG00005002122) CUL5 (ENSLCRG00005000547) ompb (ENSLCRG00005000544) CAPN5 (ENSLCRG00005000535) MYO7A (ENSLCRG00005000522) GDPD4 (ENSLCRG00005000515) AQP11 (ENSLCRG00005000514) ENSLCRG00005000510 Gilthead seabream MODERN SPECIES 4 ENSSAUG00010013922 ddx51 (ENSSAUG00010013909) bckdk (ENSSAUG00010013833) orai2 (ENSSAUG00010013825) USP28 (ENSSAUG00010013587) HTR3B (ENSSAUG00010013576) HTR3A (ENSSAUG00010013486) zbtb16a (ENSSAUG00010013480) ENSSAUG00010013478 ncam1a (ENSSAUG00010012993) ENSSAUG00010012971 cadm1a (ENSSAUG00010012903) sc5d (ENSSAUG00010012900) #23 plekhb1 (ENSSAUG00010012898) TBCEL (ENSSAUG00010012897) #21 TECTA (ENSSAUG00010012883) #22 ENSSAUG00010012876 ENSSAUG00010012874 ENSSAUG00010012873 CRK (ENSSAUG00010012872) ywhae2 (ENSSAUG00010012870) gria4b (ENSSAUG00010003244) elmod1 (ENSSAUG00010002970) ENSSAUG00010002967 slc35f2 (ENSSAUG00010002965) CUL5 (ENSSAUG00010002685) ompb (ENSSAUG00010002655) CAPN5 (ENSSAUG00010002636) MYO7A (ENSSAUG00010002598) GDPD4 (ENSSAUG00010002587) mat2b (ENSSAUG00010002582) Ovalentaria ANCESTRAL SPECIES 11 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Pomacentridae ANCESTRAL SPECIES 129 ENSGT00390000000141 ENSGT00950000183055.a.b ENSGT00940000165106 ENSGT00940000164016 ENSGT00940000161062 ENSGT00530000063786.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b Pomacentridae_A ANCESTRAL SPECIES 226 ENSGT00940000159055 ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b Amphiprion ANCESTRAL SPECIES 71 ENSGT00940000159055 ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b.g ENSGT00390000008162.e #18 ENSGT00530000064449.A.b.b.t.a.a ENSGT00940000157662.g.a #19 ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT01030000234556.a.b.a ENSGT00530000063743.b ENSGT00950000183012.B.a ENSGT00990000203615.b.b.a Orange clownfish MODERN SPECIES 6 ENSAPEG00000012553 ENSAPEG00000012532 ENSAPEG00000012459 ENSAPEG00000012446 smfn (ENSAPEG00000012435) HLCS (ENSAPEG00000012399) ENSAPEG00000012375 ENSAPEG00000012361 ENSAPEG00000012261 ENSAPEG00000012238 tiprl (ENSAPEG00000012195) AMOT (ENSAPEG00000012171) sc5d (ENSAPEG00000012101) #23 plekhb1 (ENSAPEG00000012090) TBCEL (ENSAPEG00000012084) #21 TECTA (ENSAPEG00000011945) #22 ENSAPEG00000011897 ENSAPEG00000011869 ENSAPEG00000011836 CRK (ENSAPEG00000011806) ywhae2 (ENSAPEG00000011754) gria4b (ENSAPEG00000011689) elmod1 (ENSAPEG00000011637) tlcd5b (ENSAPEG00000011625) #18 ENSAPEG00000011613 ENSAPEG00000011590 #19 emsy (ENSAPEG00000011470) ENSAPEG00000011454 mpzl1l (ENSAPEG00000011425) rabep1 (ENSAPEG00000011338) ENSAPEG00000011285 Clown anemonefish MODERN SPECIES 1465 AMOT (ENSAOCG00000017007) sc5d (ENSAOCG00000016996) #23 plekhb1 (ENSAOCG00000016971) TBCEL (ENSAOCG00000002661) #21 TECTA (ENSAOCG00000016912) #22 ENSAOCG00000016835 ENSAOCG00000016815 ENSAOCG00000016805 CRK (ENSAOCG00000016780) ywhae2 (ENSAOCG00000016753) gria4b (ENSAOCG00000016721) elmod1 (ENSAOCG00000016670) Spiny chromis MODERN SPECIES 857 TBCEL (ENSAPOG00000008464) #21 TECTA (ENSAPOG00000008433) #22 ENSAPOG00000008355 ENSAPOG00000008318 RPS6KL1 (ENSAPOG00000008287) dlst (ENSAPOG00000008268) prox2 (ENSAPOG00000008201) ESRRB (ENSAPOG00000000215) Bicolor damselfish MODERN SPECIES 357 cadm1a (ENSSPAG00000019589) sc5d (ENSSPAG00000019553) #23 plekhb1 (ENSSPAG00000019539) TBCEL (ENSSPAG00000019526) #21 TECTA (ENSSPAG00000019472) #22 ENSSPAG00000019437 ENSSPAG00000019407 ENSSPAG00000019386 CRK (ENSSPAG00000019354) ENSSPAG00000019319 ENSSPAG00000019308 ENSSPAG00000019288 ENSSPAG00000019256 mtif3 (ENSSPAG00000019236) heca (ENSSPAG00000019210) Cichlidae ANCESTRAL SPECIES 4 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Pseudocrenilabrinae_A ANCESTRAL SPECIES 22 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b.d ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Haplochromini ANCESTRAL SPECIES 8 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b.d ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Burton s mouthbrooder MODERN SPECIES 282 ENSHBUG00000000332 #8 CBL (ENSHBUG00000011977) ##7 alkbh4 (ENSHBUG00000011984) lrwd1 (ENSHBUG00000011990) bckdk (ENSHBUG00000012027) orai2 (ENSHBUG00000012054) USP28 (ENSHBUG00000012068) HTR3B (ENSHBUG00000012103) HTR3A (ENSHBUG00000012136) zbtb16a (ENSHBUG00000012173) ncam1a (ENSHBUG00000012359) cadm1a (ENSHBUG00000012460) sc5d (ENSHBUG00000012491) #23 plekhb1 (ENSHBUG00000012501) TBCEL (ENSHBUG00000012511) #21 TECTA (ENSHBUG00000012560) #22 ENSHBUG00000012616 ENSHBUG00000012627 ENSHBUG00000012649 ENSHBUG00000012670 ywhae2 (ENSHBUG00000012708) gria4b (ENSHBUG00000012754) elmod1 (ENSHBUG00000012814) slc35f2 (ENSHBUG00000012868) CUL5 (ENSHBUG00000012991) ompb (ENSHBUG00000013019) CAPN5 (ENSHBUG00000013069) MYO7A (ENSHBUG00000013188) GDPD4 (ENSHBUG00000013213) ENSHBUG00000013243 ENSHBUG00000013341 Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b.d ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b.g.a ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c P. nyererei MODERN SPECIES 310 ENSPNYG00000010312 #8 CBL (ENSPNYG00000010361) ##7 alkbh4 (ENSPNYG00000010388) lrwd1 (ENSPNYG00000010403) bckdk (ENSPNYG00000010460) orai2 (ENSPNYG00000010503) USP28 (ENSPNYG00000010533) HTR3B (ENSPNYG00000010565) HTR3A (ENSPNYG00000010596) zbtb16a (ENSPNYG00000010616) ncam1a (ENSPNYG00000010651) cadm1a (ENSPNYG00000010714) sc5d (ENSPNYG00000010741) #23 plekhb1 (ENSPNYG00000010757) TBCEL (ENSPNYG00000010775) #21 TECTA (ENSPNYG00000010819) #22 ENSPNYG00000010915 ENSPNYG00000010944 ENSPNYG00000010953 CRK (ENSPNYG00000010973) ywhae2 (ENSPNYG00000010998) gria4b (ENSPNYG00000011041) elmod1 (ENSPNYG00000011122) slc35f2 (ENSPNYG00000011151) CUL5 (ENSPNYG00000011193) CAPN5 (ENSPNYG00000011323) ompb (ENSPNYG00000011353) MYO7A (ENSPNYG00000011380) ENSPNYG00000011471 ENSPNYG00000011495 ENSPNYG00000011524 Haplochromini_B ANCESTRAL SPECIES 16 ENSGT00940000155772.a.b.d ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT01050000245001.a.a.a.a.a.a ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b.g.a ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Eastern happy MODERN SPECIES 1 bckdk (ENSACLG00000021728) ENSACLG00000021776 orai2 (ENSACLG00000021781) USP28 (ENSACLG00000021806) HTR3B (ENSACLG00000021873) HTR3A (ENSACLG00000021894) zbtb16a (ENSACLG00000021957) ncam1a (ENSACLG00000022016) ENSACLG00000022242 ENSACLG00000022259 cadm1a (ENSACLG00000022313) ENSACLG00000022333 sc5d (ENSACLG00000022339) #23 plekhb1 (ENSACLG00000022359) TBCEL (ENSACLG00000022396) #21 TECTA (ENSACLG00000022411) #22 ENSACLG00000022467 ENSACLG00000022557 ENSACLG00000022564 CRK (ENSACLG00000022569) ywhae2 (ENSACLG00000022608) gria4b (ENSACLG00000022681) ENSACLG00000022741 elmod1 (ENSACLG00000022760) slc35f2 (ENSACLG00000022846) CUL5 (ENSACLG00000022875) CAPN5 (ENSACLG00000022960) ompb (ENSACLG00000023024) ENSACLG00000023038 MYO7A (ENSACLG00000023046) ENSACLG00000023124 Zebra mbuna MODERN SPECIES 1092 CBL (ENSMZEG00005010282) ##7 alkbh4 (ENSMZEG00005010298) lrwd1 (ENSMZEG00005010320) bckdk (ENSMZEG00005010369) orai2 (ENSMZEG00005010395) USP28 (ENSMZEG00005010418) HTR3B (ENSMZEG00005010442) HTR3A (ENSMZEG00005010453) zbtb16a (ENSMZEG00005010471) ncam1a (ENSMZEG00005010503) ENSMZEG00005010641 cadm1a (ENSMZEG00005010667) sc5d (ENSMZEG00005010700) #23 plekhb1 (ENSMZEG00005010705) TBCEL (ENSMZEG00005010743) #21 TECTA (ENSMZEG00005010758) #22 ENSMZEG00005010774 ENSMZEG00005010803 ENSMZEG00005010810 CRK (ENSMZEG00005010819) ywhae2 (ENSMZEG00005010829) gria4b (ENSMZEG00005010846) elmod1 (ENSMZEG00005010879) slc35f2 (ENSMZEG00005010904) CUL5 (ENSMZEG00005010930) CAPN5 (ENSMZEG00005010960) ompb (ENSMZEG00005010970) MYO7A (ENSMZEG00005011034) ENSMZEG00005011111 ENSMZEG00005011123 ENSMZEG00005011134 Lyretail cichlid MODERN SPECIES 297 ENSNBRG00000010694 #8 CBL (ENSNBRG00000010817) ##7 alkbh4 (ENSNBRG00000010872) lrwd1 (ENSNBRG00000010906) bckdk (ENSNBRG00000011012) orai2 (ENSNBRG00000011047) USP28 (ENSNBRG00000011079) HTR3B (ENSNBRG00000011109) HTR3A (ENSNBRG00000011137) zbtb16a (ENSNBRG00000011170) ncam1a (ENSNBRG00000011478) cadm1a (ENSNBRG00000012694) sc5d (ENSNBRG00000012834) #23 plekhb1 (ENSNBRG00000012849) TBCEL (ENSNBRG00000012856) #21 TECTA (ENSNBRG00000012877) #22 ENSNBRG00000012931 ENSNBRG00000012965 ENSNBRG00000012996 CRK (ENSNBRG00000013010) ywhae2 (ENSNBRG00000013043) gria4b (ENSNBRG00000013070) elmod1 (ENSNBRG00000013140) slc35f2 (ENSNBRG00000013171) CUL5 (ENSNBRG00000013257) CAPN5 (ENSNBRG00000013353) ompb (ENSNBRG00000013376) MYO7A (ENSNBRG00000013391) ENSNBRG00000013486 ENSNBRG00000013531 ENSNBRG00000013541 Nile tilapia MODERN SPECIES 1 alkbh4 (ENSONIG00000041679) lrwd1 (ENSONIG00000009466) bckdk (ENSONIG00000009468) orai2 (ENSONIG00000009473) USP28 (ENSONIG00000009476) htr3b (ENSONIG00000009486) HTR3A (ENSONIG00000009491) zbtb16a (ENSONIG00000009495) ENSONIG00000032583 ncam1a (ENSONIG00000009496) cadm1a (ENSONIG00000009502) ENSONIG00000040892 sc5d (ENSONIG00000034053) #23 plekhb1 (ENSONIG00000009505) TBCEL (ENSONIG00000037823) #21 TECTA (ENSONIG00000009508) #22 ENSONIG00000009511 ENSONIG00000009512 ENSONIG00000009514 CRK (ENSONIG00000009518) ywhae2 (ENSONIG00000032945) gria4b (ENSONIG00000009523) elmod1 (ENSONIG00000009536) slc35f2 (ENSONIG00000009539) CUL5 (ENSONIG00000009545) CAPN5 (ENSONIG00000009550) ompb (ENSONIG00000021460) ENSONIG00000027896 MYO7A (ENSONIG00000009556) ENSONIG00000009570 AQP11 (ENSONIG00000009574) Midas cichlid MODERN SPECIES 344 alkbh4 (ENSACIG00000012127) ENSACIG00000012141 lrwd1 (ENSACIG00000012155) bckdk (ENSACIG00000012217) orai2 (ENSACIG00000012245) USP28 (ENSACIG00000012269) ENSACIG00000012428 HTR3A (ENSACIG00000012447) zbtb16a (ENSACIG00000012478) ncam1a (ENSACIG00000012493) ENSACIG00000012525 cadm1a (ENSACIG00000012546) sc5d (ENSACIG00000012680) #23 plekhb1 (ENSACIG00000012697) ENSACIG00000012713 TECTA (ENSACIG00000012735) #22 ENSACIG00000012788 ENSACIG00000012816 ENSACIG00000012844 ENSACIG00000012851 CRK (ENSACIG00000012862) ywhae2 (ENSACIG00000012875) gria4b (ENSACIG00000012893) elmod1 (ENSACIG00000012935) slc35f2 (ENSACIG00000012974) CUL5 (ENSACIG00000013036) CAPN5 (ENSACIG00000013078) ompb (ENSACIG00000013111) MYO7A (ENSACIG00000013121) ENSACIG00000013215 AQP11 (ENSACIG00000013247) Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Oryzias ANCESTRAL SPECIES 14 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c ENSGT00390000006114 Oryzias_b ANCESTRAL SPECIES 13 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h Indian medaka MODERN SPECIES 4 CBL (ENSOMEG00000002516) ##7 alkbh4 (ENSOMEG00000002505) bckdk (ENSOMEG00000002498) orai2 (ENSOMEG00000002487) USP28 (ENSOMEG00000002475) ENSOMEG00000000648 HTR3A (ENSOMEG00000002452) zbtb16a (ENSOMEG00000002434) ncam1a (ENSOMEG00000002424) ENSOMEG00000002402 ENSOMEG00000002397 cadm1a (ENSOMEG00000002384) sc5d (ENSOMEG00000002344) #23 plekhb1 (ENSOMEG00000002335) TBCEL (ENSOMEG00000002324) #21 TECTA (ENSOMEG00000002309) #22 ENSOMEG00000002284 ENSOMEG00000002274 ENSOMEG00000002261 CRK (ENSOMEG00000002246) ywhae2 (ENSOMEG00000002238) gria4b (ENSOMEG00000002214) MYO7A (ENSOMEG00000002179) CAPN5 (ENSOMEG00000002138) ompb (ENSOMEG00000002119) CUL5 (ENSOMEG00000002107) slc35f2 (ENSOMEG00000000029) elmod1 (ENSOMEG00000000025) AQP11 (ENSOMEG00000002076) ENSOMEG00000002068 FCHSD2 (ENSOMEG00000002057) Javanese ricefish MODERN SPECIES 5 ENSOJAG00000004377 #8 CBL (ENSOJAG00000004198) ##7 alkbh4 (ENSOJAG00000004153) lrwd1 (ENSOJAG00000004121) bckdk (ENSOJAG00000003839) orai2 (ENSOJAG00000003752) USP28 (ENSOJAG00000003216) HTR3B (ENSOJAG00000003096) HTR3A (ENSOJAG00000003089) zbtb16a (ENSOJAG00000003079) ncam1a (ENSOJAG00000002758) cadm1a (ENSOJAG00000002600) sc5d (ENSOJAG00000002565) #23 TBCEL (ENSOJAG00000002530) #21 plekhb1 (ENSOJAG00000002508) TECTA (ENSOJAG00000002408) #22 ENSOJAG00000002376 ENSOJAG00000002367 ENSOJAG00000002357 CRK (ENSOJAG00000002345) ywhae2 (ENSOJAG00000002299) gria4b (ENSOJAG00000001902) elmod1 (ENSOJAG00000001746) slc35f2 (ENSOJAG00000001681) ompb (ENSOJAG00000020893) CAPN5 (ENSOJAG00000020775) DOC2B (ENSOJAG00000020663) rcc1l (ENSOJAG00000020598) tlcd5b (ENSOJAG00000020586) #18 ENSOJAG00000020578 emsy (ENSOJAG00000020358) Oryzias_a ANCESTRAL SPECIES 2 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT01030000234886.e.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Japanese Medaka HdrR MODERN SPECIES 5 alkbh4 (ENSORLG00000025649) lrwd1 (ENSORLG00000014559) bckdk (ENSORLG00000014575) orai2 (ENSORLG00000014583) ENSORLG00000025543 USP28 (ENSORLG00000014609) ENSORLG00000014619 HTR3A (ENSORLG00000014631) zbtb16a (ENSORLG00000014640) ncam1a (ENSORLG00000014681) ENSORLG00000025108 cadm1a (ENSORLG00000014698) sc5d (ENSORLG00000028563) #23 plekhb1 (ENSORLG00000021993) ENSORLG00000014756 #21 TECTA (ENSORLG00000014771) #22 ENSORLG00000014803 ENSORLG00000014818 ENSORLG00000014825 ENSORLG00000023366 ywhae2 (ENSORLG00000014845) ENSORLG00000026199 gria4b (ENSORLG00000014865) ENSORLG00000029515 elmod1 (ENSORLG00000014887) slc35f2 (ENSORLG00000014902) ENSORLG00000014938 ENSORLG00000014975 ompb (ENSORLG00000014978) ENSORLG00000015036 ENSORLG00000021923 Chinese medaka MODERN SPECIES 1004 ap2b1 (ENSOSIG00000021672) HEPACAM (ENSOSIG00000021637) ENSOSIG00000021626 #8 CBL (ENSOSIG00000021516) ##7 alkbh4 (ENSOSIG00000021509) bckdk (ENSOSIG00000021436) USP28 (ENSOSIG00000021087) ENSOSIG00000021056 HTR3A (ENSOSIG00000021015) zbtb16a (ENSOSIG00000021001) ncam1a (ENSOSIG00000017708) cadm1a (ENSOSIG00000017497) sc5d (ENSOSIG00000017492) #23 plekhb1 (ENSOSIG00000017484) TBCEL (ENSOSIG00000017479) #21 TECTA (ENSOSIG00000017435) #22 ENSOSIG00000017423 ENSOSIG00000017416 ENSOSIG00000017409 CRK (ENSOSIG00000017403) ywhae2 (ENSOSIG00000017400) gria4b (ENSOSIG00000012207) Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00940000156536.e.a ENSGT00390000009497.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00950000183116.b.a.a.b.a.b.m.b ENSGT00940000156944.a.a ENSGT00940000170476 ENSGT00940000163509.a.b ENSGT00940000163701.b.a.b.b.b ENSGT00550000074939 ENSGT00940000161176 Poeciliinae ANCESTRAL SPECIES 26 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00950000183116.b.a.a.b.a.b.m.b ENSGT00940000156944.a.a ENSGT00940000170476 ENSGT00940000163509.a.b ENSGT00940000163701.b.a.b.b.b ENSGT00550000074939 ENSGT00940000161176 Poecilia ANCESTRAL SPECIES 42 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01090000260061.c.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009571.a.b.a.b.g.a.a.b.a.b.b ENSGT00940000156944.a.a ENSGT00940000170476 ENSGT00940000155641.g.a.d ENSGT00940000163509.a.b ENSGT00940000163701.b.a.b.b.b NAME_6 ANCESTRAL SPECIES 44 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT01090000260061.c.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00950000183116.b.a.a.b.a.b.m.b.n.a.a ENSGT00950000183116.b.a.a.b.a.b.m.b.n.a.b ENSGT00390000009571.a.b.a.b.g.a.a.b.a.b.b ENSGT00940000156944.a.a ENSGT00940000170476 ENSGT00940000155641.g.a.d Amazon molly MODERN SPECIES 393 ENSPFOG00000016824 #8 CBL (ENSPFOG00000016793) ##7 alkbh4 (ENSPFOG00000016780) lrwd1 (ENSPFOG00000016751) bckdk (ENSPFOG00000016728) orai2 (ENSPFOG00000016719) USP28 (ENSPFOG00000016610) HTR3B (ENSPFOG00000016571) HTR3A (ENSPFOG00000016513) zbtb16a (ENSPFOG00000016496) ncam1a (ENSPFOG00000016319) cadm1a (ENSPFOG00000016257) sc5d (ENSPFOG00000016232) #23 plekhb1 (ENSPFOG00000016206) TBCEL (ENSPFOG00000016174) #21 TECTA (ENSPFOG00000015997) #22 ENSPFOG00000015935 ENSPFOG00000023404 ENSPFOG00000015931 ENSPFOG00000015915 CRK (ENSPFOG00000015900) ENSPFOG00000015881 Sailfin molly MODERN SPECIES 2409 TECTA (ENSPLAG00000000509) #22 ENSPLAG00000016859 Guppy MODERN SPECIES 444 ENSPREG00000015099 #8 CBL (ENSPREG00000015193) ##7 alkbh4 (ENSPREG00000015249) lrwd1 (ENSPREG00000015261) bckdk (ENSPREG00000015279) orai2 (ENSPREG00000015290) USP28 (ENSPREG00000015298) HTR3B (ENSPREG00000015317) HTR3A (ENSPREG00000015349) zbtb16a (ENSPREG00000015369) ncam1a (ENSPREG00000015467) cadm1a (ENSPREG00000015756) sc5d (ENSPREG00000015849) #23 ENSPREG00000015863 TBCEL (ENSPREG00000015882) #21 TECTA (ENSPREG00000015928) #22 ENSPREG00000016014 ENSPREG00000016026 ENSPREG00000016058 ENSPREG00000016074 ENSPREG00000016089 ENSPREG00000016097 ENSPREG00000016115 gria4b (ENSPREG00000016137) elmod1 (ENSPREG00000016181) slc35f2 (ENSPREG00000016242) CUL5 (ENSPREG00000016258) ENSPREG00000016289 ADRA1B (ENSPREG00000016321) rhot1a (ENSPREG00000016349) ENSPREG00000016379 Platyfish MODERN SPECIES 2 ENSXMAG00000021344 ENSXMAG00000025064 #8 CBL (ENSXMAG00000008763) ##7 alkbh4 (ENSXMAG00000008785) lrwd1 (ENSXMAG00000008786) orai2 (ENSXMAG00000008815) USP28 (ENSXMAG00000008818) HTR3B (ENSXMAG00000008834) HTR3A (ENSXMAG00000008835) zbtb16a (ENSXMAG00000008853) ncam1a (ENSXMAG00000008861) cadm1a (ENSXMAG00000012398) sc5d (ENSXMAG00000029314) #23 plekhb1 (ENSXMAG00000012387) TBCEL (ENSXMAG00000012372) #21 TECTA (ENSXMAG00000012336) #22 ENSXMAG00000012318 ENSXMAG00000003573 ENSXMAG00000011551 ENSXMAG00000023400 ywhae2 (ENSXMAG00000000541) gria4b (ENSXMAG00000008529) elmod1 (ENSXMAG00000012302) slc35f2 (ENSXMAG00000015958) CUL5 (ENSXMAG00000012228) cbln10 (ENSXMAG00000012226) ENSXMAG00000025188 tmem120aa (ENSXMAG00000011139) styxl1 (ENSXMAG00000011154) HEPACAM (ENSXMAG00000027038) ompb (ENSXMAG00000019651) NAME_4 ANCESTRAL SPECIES 195 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000175256 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00950000183116.b.a.a.b.a.b.m.b ENSGT00940000156944.a.a ENSGT00940000170476 Mummichog MODERN SPECIES 2233 ENSFHEG00000021355 #8 CBL (ENSFHEG00000021459) ##7 alkbh4 (ENSFHEG00000021469) bckdk (ENSFHEG00000021556) lrwd1 (ENSFHEG00000021575) orai2 (ENSFHEG00000021577) USP28 (ENSFHEG00000021605) HTR3B (ENSFHEG00000021702) HTR3A (ENSFHEG00000021751) zbtb16a (ENSFHEG00000021769) ncam1a (ENSFHEG00000021827) cadm1a (ENSFHEG00000022123) sc5d (ENSFHEG00000022165) #23 plekhb1 (ENSFHEG00000022204) ENSFHEG00000022219 #21 TECTA (ENSFHEG00000022299) #22 ENSFHEG00000022347 ENSFHEG00000022353 ENSFHEG00000022394 CRK (ENSFHEG00000022422) ywhae2 (ENSFHEG00000022443) gria4b (ENSFHEG00000022505) elmod1 (ENSFHEG00000022618) slc35f2 (ENSFHEG00000022630) CUL5 (ENSFHEG00000022705) cbln10 (ENSFHEG00000022738) ADRA1B (ENSFHEG00000022768) ENSFHEG00000000559 ENSFHEG00000022793 Sheepshead minnow MODERN SPECIES 155 bckdk (ENSCVAG00000006975) orai2 (ENSCVAG00000006987) USP28 (ENSCVAG00000007037) ENSCVAG00000007046 HTR3B (ENSCVAG00000007072) HTR3A (ENSCVAG00000007099) zbtb16a (ENSCVAG00000007140) ncam1a (ENSCVAG00000000230) ENSCVAG00000008194 cadm1a (ENSCVAG00000008229) sc5d (ENSCVAG00000008255) #23 plekhb1 (ENSCVAG00000008263) TBCEL (ENSCVAG00000008273) #21 TECTA (ENSCVAG00000008337) #22 ENSCVAG00000008352 ENSCVAG00000008360 ENSCVAG00000008374 CRK (ENSCVAG00000008397) ywhae2 (ENSCVAG00000008428) gria4b (ENSCVAG00000008986) Aplocheiloidei ANCESTRAL SPECIES 59 ENSGT00940000155838.f #8 ENSGT00940000155772.a.b ##7 ENSGT00390000006344 ENSGT00940000154248.b ENSGT01030000234646.A ENSGT00390000015354.c.b.b ENSGT00940000157670 ENSGT00940000158478 ENSGT00940000157705 ENSGT00940000154616.a.a ENSGT00940000155743.b ENSGT00940000156093.e.a ENSGT00550000075101.q #23 ENSGT00390000013989.b ENSGT00530000063405.b.f #21 ENSGT00950000183155.a.a.a.b #22 ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00940000154495.a.b ENSGT00820000127055.a.b ENSGT00940000155677.b ENSGT00940000159782.b ENSGT00390000015655.a.m.b ENSGT00940000156648.d ENSGT00390000009497.a ENSGT00940000156536.e.a ENSGT00940000155350.h ENSGT00940000156251.b ENSGT00530000063816.c.a ENSGT00530000064411.b ENSGT00510000046732.A.c Mangrove rivulus MODERN SPECIES 50 ENSKMAG00000017788 #8 CBL (ENSKMAG00000017742) ##7 alkbh4 (ENSKMAG00000017732) lrwd1 (ENSKMAG00000017709) bckdk (ENSKMAG00000017680) orai2 (ENSKMAG00000017667) USP28 (ENSKMAG00000017634) HTR3B (ENSKMAG00000017606) HTR3A (ENSKMAG00000017587) zbtb16a (ENSKMAG00000017553) ncam1a (ENSKMAG00000017383) cadm1a (ENSKMAG00000017298) sc5d (ENSKMAG00000017276) #23 plekhb1 (ENSKMAG00000017267) TBCEL (ENSKMAG00000017245) #21 TECTA (ENSKMAG00000017180) #22 ENSKMAG00000017155 Turquoise killifish MODERN SPECIES 1620 LRWD1 (ENSNFUG00015016599) BCKDK (ENSNFUG00015016121) ORAI2 (ENSNFUG00015016067) USP28 (ENSNFUG00015015499) HTR3B (ENSNFUG00015015311) HTR3A (ENSNFUG00015015300) ENSNFUG00015015221 ncam1a (ENSNFUG00015008043) ENSNFUG00015007686 ENSNFUG00015007681 cadm1a (ENSNFUG00015007654) ENSNFUG00015007648 SC5DL (ENSNFUG00015007629) #23 PLEKHB1 (ENSNFUG00015007619) TBCELB (ENSNFUG00015007615) #21 TECTA (ENSNFUG00015007575) #22 ENSNFUG00015007542 ENSNFUG00015007534 ENSNFUG00015007530 FAM57A (ENSNFUG00015007509) CRK (ENSNFUG00015007491) ENSNFUG00015007489 YWHAE1 (ENSNFUG00015007462) gria4b (ENSNFUG00015006891) ELMOD1 (ENSNFUG00015006801) slc35f2 (ENSNFUG00015006792) CUL5B (ENSNFUG00015006751) ompb (ENSNFUG00015006723) CAPN5B (ENSNFUG00015006698) ENSNFUG00015006690 ENSNFUG00015006614 Elephant shark MODERN SPECIES 1990 ENSCMIG00000003954 #21 TECTA (ENSCMIG00000003937) #22 ENSCMIG00000003927 #19 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a ##22 Neopterygii ANCESTRAL SPECIES 93 ENSGT00390000009726 ENSGT00940000154446.b.b.b ENSGT01020000230438.A ENSGT01050000244883.A.a.a.b ENSGT00390000010337.A ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT00940000166443 ENSGT00390000003568 ENSGT00950000183007.b ENSGT00940000163304 ENSGT01100000263586 ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b ENSGT00980000198998 ENSGT00990000205757 ENSGT00940000153695.C ENSGT00940000153062.C ENSGT00940000166706 ENSGT00940000160297 ENSGT00940000160272 ENSGT00390000013276 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Goldfish MODERN SPECIES 1720 ENSCARG00000040447 ##22 ENSCARG00000040417 ENSCARG00000040409 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 Golden-line barbel MODERN SPECIES 368 FDXR (ENSSGRG00000043075) ENSSGRG00000043078 wbp2 (ENSSGRG00000043079) bccip (ENSSGRG00000043081) dhx32a (ENSSGRG00000043137) ADAM12 (ENSSGRG00000043138) dock1 (ENSSGRG00000043216) INSYN2A (ENSSGRG00000043279) ENSSGRG00000043284 zgc:112964 (ENSSGRG00000043285) ##22 ENSSGRG00000043286 ##22 foxi1 (ENSSGRG00000043287) ENSSGRG00000043288 ENSSGRG00000043289 PUM2 (ENSSGRG00000043331) tshr (ENSSGRG00000045795) Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.a ##22 P. kingsleyae MODERN SPECIES 72 ENSPKIG00000011895 ENSPKIG00000011932 IFFO1 (ENSPKIG00000011950) vamp1a (ENSPKIG00000011993) CHD4 (ENSPKIG00000012023) gnb3b (ENSPKIG00000012108) znf384a (ENSPKIG00000012153) FLOT1 (ENSPKIG00000012343) ENSPKIG00000012424 ENSPKIG00000012460 ENSPKIG00000012493 erf (ENSPKIG00000012566) ENSPKIG00000012582 GRIK5 (ENSPKIG00000012638) ENSPKIG00000012719 ENSPKIG00000012770 ##22 ENSPKIG00000012788 ##22 ENSPKIG00000012805 ##22 ENSPKIG00000012820 ##22 pip5k1ab (ENSPKIG00000012861) psmd4a (ENSPKIG00000012954) ENSPKIG00000013018 znf687b (ENSPKIG00000013049) ENSPKIG00000013094 hax1 (ENSPKIG00000013156) UBAP2L (ENSPKIG00000013269) zgc:152968 (ENSPKIG00000013454) GBGT1 (ENSPKIG00000013554) rab42a (ENSPKIG00000013594) ENSPKIG00000013620 ENSPKIG00000013634 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.b ##22 Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.a.b ##22 P. kingsleyae MODERN SPECIES 72 ENSPKIG00000013750 serinc2 (ENSPKIG00000013714) ENSPKIG00000013681 ENSPKIG00000013634 ENSPKIG00000013620 rab42a (ENSPKIG00000013594) GBGT1 (ENSPKIG00000013554) zgc:152968 (ENSPKIG00000013454) UBAP2L (ENSPKIG00000013269) hax1 (ENSPKIG00000013156) ENSPKIG00000013094 znf687b (ENSPKIG00000013049) ENSPKIG00000013018 psmd4a (ENSPKIG00000012954) pip5k1ab (ENSPKIG00000012861) ENSPKIG00000012820 ##22 ENSPKIG00000012805 ##22 ENSPKIG00000012788 ##22 ENSPKIG00000012770 ##22 ENSPKIG00000012719 GRIK5 (ENSPKIG00000012638) ENSPKIG00000012582 erf (ENSPKIG00000012566) ENSPKIG00000012493 ENSPKIG00000012460 ENSPKIG00000012424 FLOT1 (ENSPKIG00000012343) znf384a (ENSPKIG00000012153) gnb3b (ENSPKIG00000012108) CHD4 (ENSPKIG00000012023) vamp1a (ENSPKIG00000011993) Osteoglossocephalai ANCESTRAL SPECIES 4 ENSGT00950000183206.a.b.a.b ##31 ENSGT00940000154494.a ENSGT01020000230438.D ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT00940000154616.b ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b ENSGT00940000153062.C ENSGT00940000153695.C ENSGT00990000205757 ENSGT00980000198998 ENSGT00940000166706 ENSGT00940000160297 ENSGT00940000160272 ENSGT00390000013276 ENSGT00940000166159 ENSGT00940000166537 ENSGT00950000183007.a.b.i Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Asian bonytongue MODERN SPECIES 22 ENSSFOG00015023786 b4gat1 (ENSSFOG00015023787) znf16l (ENSSFOG00015023789) nit1 (ENSSFOG00015023792) ENSSFOG00015023793 rbm14b (ENSSFOG00015025672) rcvrn2 (ENSSFOG00015023804) slc2a3a (ENSSFOG00015023809) gnb3b (ENSSFOG00015023815) znf384a (ENSSFOG00015023839) FLOT1 (ENSSFOG00015029543) ENSSFOG00015030175 ENSSFOG00015023851 ENSSFOG00015023856 ENSSFOG00015023858 ENSSFOG00015023859 ##22 psmd4a (ENSSFOG00015023864) hax1 (ENSSFOG00015023868) ENSSFOG00015023874 fbxl22 (ENSSFOG00015023875) commd4 (ENSSFOG00015028249) MAN2C1 (ENSSFOG00015023878) cyp11a1.1 (ENSSFOG00015023887) hexa (ENSSFOG00015023889) ppcdc (ENSSFOG00015023892) RPS27 (ENSSFOG00015028128) DNAJA4 (ENSSFOG00015029615) ENSSFOG00015030887 zwilch (ENSSFOG00015023897) GCNT3 (ENSSFOG00015005883) GCNT3 (ENSSFOG00015015824) Clupeocephala ANCESTRAL SPECIES 587 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.b Euteleosteomorpha ANCESTRAL SPECIES 445 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.b.a.a.b.c.a ##22 Acanthomorphata ANCESTRAL SPECIES 410 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.b.a.a.b.c.a ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01020000230438.D ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT01080000257365.b.a.a.a ENSGT00940000154616.b ENSGT01030000235141 ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.b.a.a.b.c.a ##22 ENSGT00940000180166 ENSGT00950000183155.a.b.a.a.a ##22 ENSGT00940000175477 ENSGT00980000198720 ENSGT00980000198681 ENSGT00940000153695.C ENSGT00990000205757 ENSGT00940000175641 ENSGT00390000004215.a.b.b.c.b.d ENSGT00390000008932.m ENSGT00390000008932.n ENSGT00940000156775.f Pinecone sodierfish MODERN SPECIES 10 ENSMMDG00005024346 mylpfb (ENSMMDG00005024344) pgap3 (ENSMMDG00005024338) erbb2 (ENSMMDG00005024319) dcaf7 (ENSMMDG00005024313) ENSMMDG00005024311 TACO1 (ENSMMDG00005024310) pth3r (ENSMMDG00005024308) rundc3ab (ENSMMDG00005024305) ENSMMDG00005024304 ndufa4b (ENSMMDG00005024302) ENSMMDG00005024301 SPOP (ENSMMDG00005024296) ENSMMDG00005024292 ENSMMDG00005024283 ##22 ENSMMDG00005024271 ##22 ENSMMDG00005024265 ##22 ngfrb (ENSMMDG00005024262) slc4a1b (ENSMMDG00005024239) ENSMMDG00005024237 atxn7l3b (ENSMMDG00005024235) SMARCD2 (ENSMMDG00005024054) psmc5 (ENSMMDG00005023958) MPP3 (ENSMMDG00005023854) ENSMMDG00005023811 ENSMMDG00005023804 znf281b (ENSMMDG00005023802) ENSMMDG00005023799 ENSMMDG00005023794 nmt1b (ENSMMDG00005023792) ENSMMDG00005023791 Percomorphaceae ANCESTRAL SPECIES ENSGT01020000230438.D ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT01080000257365.b.a.a.a ENSGT00940000154616.b ENSGT01030000235141 ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.b.a.a.b.c.a ##22 ENSGT00940000180166 ENSGT00950000183155.a.b.a.a.a ##22 ENSGT00940000175477 ENSGT00980000198720 ENSGT00980000198681 ENSGT00940000153695.C ENSGT00940000175641 ENSGT00390000004215.a.b.b.c.b.d ENSGT00390000008932.m ENSGT00390000008932.n ENSGT00940000156775.f ENSGT00940000157833.h.b Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT01020000230438.D ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT01080000257365.b.a.a.a ENSGT00940000154616.b ENSGT01030000235141 ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.b.a.a.b.c.a ##22 ENSGT01000000215302 ENSGT00950000183155.a.b.a.a.a ##22 ENSGT01000000214971 ENSGT00940000175477 ENSGT00980000198681 ENSGT00940000153695.C ENSGT00670000099472 ENSGT00940000175641 ENSGT00390000004215.a.b.b.c.b.d ENSGT00390000008932.m ENSGT00390000008932.n ENSGT00940000156775.f Ovalentaria ANCESTRAL SPECIES 13 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Atherinomorphae ANCESTRAL SPECIES 10 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Oryzias ANCESTRAL SPECIES 124 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.r.a.b.b ENSGT00940000177899 Oryzias_b ANCESTRAL SPECIES 173 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.r.a.b.b.a ENSGT00940000177899 Javanese ricefish MODERN SPECIES 10 pkmyt1 (ENSOJAG00000023546) ENSOJAG00000023542 mylpfb (ENSOJAG00000023531) pgap3 (ENSOJAG00000023525) erbb2 (ENSOJAG00000022944) kcnh2a (ENSOJAG00000022755) TACO1 (ENSOJAG00000022744) pth3r (ENSOJAG00000022691) rundc3ab (ENSOJAG00000022673) ENSOJAG00000022666 ndufa4b (ENSOJAG00000022664) ENSOJAG00000022662 SPOP (ENSOJAG00000022636) ENSOJAG00000022634 ENSOJAG00000022630 ENSOJAG00000022623 ##22 ENSOJAG00000022610 ENSOJAG00000022602 ENSOJAG00000022581 ##22 ENSOJAG00000022529 ##22 ENSOJAG00000022507 ENSOJAG00000022499 ##22 ngfrb (ENSOJAG00000022492) slc4a1b (ENSOJAG00000022453) ENSOJAG00000022442 atxn7l3b (ENSOJAG00000022437) SMARCD2 (ENSOJAG00000022347) psmc5 (ENSOJAG00000022250) MPP3 (ENSOJAG00000021715) muc13b (ENSOJAG00000020486) ENSOJAG00000020460 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 NAME_4 ANCESTRAL SPECIES 50 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000169450.a ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Mummichog MODERN SPECIES 1183 ENSFHEG00000017610 ##22 ENSFHEG00000017630 Poeciliinae ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Poecilia ANCESTRAL SPECIES 22 ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000157790.sb.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00940000173105 ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.cb.a ##22 ENSGT00940000164679.n.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.n.b ENSGT00950000183155.a.a.a.a.b.cb.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00940000164679.n.a.a ENSGT00950000183155.a.a.a.a.b.bb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.c ENSGT01030000235331 ENSGT00710000106813.B.b.d NAME_6 ANCESTRAL SPECIES 599 ENSGT00950000183155.a.a.a.a.b.cb.a ##22 ENSGT00940000164679.n.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 Sailfin molly DUPLICATION Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 4145 ENSPLAG00000002811 ##22 Sailfin molly MODERN SPECIES 2202 ENSPLAG00000006931 ##22 ENSPLAG00000006968 ENSPLAG00000006980 ##22 ENSPLAG00000006987 ngfrb (ENSPLAG00000007046) slc4a1b (ENSPLAG00000007109) ENSPLAG00000007127 atxn7l3b (ENSPLAG00000007145) Sailfin molly MODERN SPECIES 2452 ENSPLAG00000013099 SPOP (ENSPLAG00000013086) NXPH3 (ENSPLAG00000013067) NXPH3 (ENSPLAG00000013050) ENSPLAG00000013034 ENSPLAG00000012991 ##22 ENSPLAG00000012801 ENSPLAG00000012776 ##22 Amazon molly MODERN SPECIES 1304 ENSPFOG00000006167 ENSPFOG00000015151 ##22 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Pomacentridae ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Amphiprion ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 21 ENSAPEG00000015034 lin37 (ENSAPEG00000014953) proser3 (ENSAPEG00000014903) hspb6 (ENSAPEG00000014923) psenen (ENSAPEG00000014891) ENSAPEG00000014877 ENSAPEG00000014859 ENSAPEG00000014850 ENSAPEG00000014840 APLP1 (ENSAPEG00000014823) ENSAPEG00000014758 kirrel3l (ENSAPEG00000014706) nphs1 (ENSAPEG00000014598) ENSAPEG00000014579 ENSAPEG00000014569 ##22 ENSAPEG00000014554 ##22 ENSAPEG00000014540 ENSAPEG00000014526 FCGBP (ENSAPEG00000014197) ##22 ENSAPEG00000014126 ENSAPEG00000014059 ENSAPEG00000014027 ENSAPEG00000014009 ENSAPEG00000013979 csnk2a1 (ENSAPEG00000013874) ENSAPEG00000013924 ENSAPEG00000013834 ENSAPEG00000013823 ENSAPEG00000013809 ENSAPEG00000013740 kcnk5b (ENSAPEG00000013732) Orange clownfish MODERN SPECIES 21 ctrl (ENSAPEG00000015046) ENSAPEG00000015034 lin37 (ENSAPEG00000014953) proser3 (ENSAPEG00000014903) hspb6 (ENSAPEG00000014923) psenen (ENSAPEG00000014891) ENSAPEG00000014877 ENSAPEG00000014859 ENSAPEG00000014850 ENSAPEG00000014840 APLP1 (ENSAPEG00000014823) ENSAPEG00000014758 kirrel3l (ENSAPEG00000014706) nphs1 (ENSAPEG00000014598) ENSAPEG00000014579 ENSAPEG00000014569 ##22 ENSAPEG00000014554 ##22 ENSAPEG00000014540 ENSAPEG00000014526 FCGBP (ENSAPEG00000014197) ##22 ENSAPEG00000014126 ENSAPEG00000014059 ENSAPEG00000014027 ENSAPEG00000014009 ENSAPEG00000013979 csnk2a1 (ENSAPEG00000013874) ENSAPEG00000013924 ENSAPEG00000013834 ENSAPEG00000013823 ENSAPEG00000013809 ENSAPEG00000013740 Cichlidae ANCESTRAL SPECIES 15 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Midas cichlid MODERN SPECIES 71 pkmyt1 (ENSACIG00000014312) ENSACIG00000014292 ENSACIG00000014280 pgap3 (ENSACIG00000014254) erbb2 (ENSACIG00000014118) dcaf7 (ENSACIG00000014092) KCNH2 (ENSACIG00000014075) TACO1 (ENSACIG00000014052) pth3r (ENSACIG00000014009) rundc3ab (ENSACIG00000013902) ENSACIG00000013882 ndufa4b (ENSACIG00000013800) ENSACIG00000013788 SPOP (ENSACIG00000013766) ENSACIG00000013753 ENSACIG00000013745 ##22 ENSACIG00000013730 ##22 ENSACIG00000013714 ENSACIG00000013697 ##22 ngfrb (ENSACIG00000013690) slc4a1b (ENSACIG00000013654) atxn7l3b (ENSACIG00000013637) SMARCD2 (ENSACIG00000013435) psmc5 (ENSACIG00000013393) MPP3 (ENSACIG00000013248) ENSACIG00000013220 ENSACIG00000013206 ENSACIG00000012762 ENSACIG00000012730 znf281b (ENSACIG00000012710) ENSACIG00000012704 Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Lyretail cichlid MODERN SPECIES 436 pkmyt1 (ENSNBRG00000011577) ENSNBRG00000011566 ENSNBRG00000011548 mylpfb (ENSNBRG00000011528) pgap3 (ENSNBRG00000011491) erbb2 (ENSNBRG00000011460) ENSNBRG00000011139 TACO1 (ENSNBRG00000011026) pth3r (ENSNBRG00000010880) rundc3ab (ENSNBRG00000010786) ENSNBRG00000010761 ndufa4b (ENSNBRG00000010686) ENSNBRG00000010666 SPOP (ENSNBRG00000010651) ENSNBRG00000010634 ENSNBRG00000010597 ##22 ENSNBRG00000010570 ##22 Nile tilapia MODERN SPECIES 20 ENSONIG00000039985 ENSONIG00000011530 mylpfb (ENSONIG00000011532) pgap3 (ENSONIG00000011535) erbb2 (ENSONIG00000011537) dcaf7 (ENSONIG00000011567) ENSONIG00000011568 TACO1 (ENSONIG00000011570) pth3r (ENSONIG00000011572) rundc3ab (ENSONIG00000011581) ENSONIG00000011585 ndufa4b (ENSONIG00000031058) ENSONIG00000011586 SPOP (ENSONIG00000011587) ENSONIG00000011590 ENSONIG00000027714 ##22 ENSONIG00000038239 ENSONIG00000016477 ##22 ENSONIG00000028852 ngfrb (ENSONIG00000031781) slc4a1b (ENSONIG00000016469) ENSONIG00000016468 atxn7l3b (ENSONIG00000036417) SMARCD2 (ENSONIG00000016465) psmc5 (ENSONIG00000035978) MPP3 (ENSONIG00000016460) ENSONIG00000016455 ENSONIG00000042113 ENSONIG00000030966 ENSONIG00000028559 ENSONIG00000033433 Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Carangaria ANCESTRAL SPECIES 13 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000166417 ENSGT00950000183206.a.b.a.b ##31 ENSGT00940000154494.a ENSGT00390000002748 ENSGT01020000230438.D ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT00940000154616.b ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.a ##22 ENSGT00940000175477 ENSGT00980000198681 ENSGT00940000153695.C ENSGT00670000099472 ENSGT00940000175641 ENSGT00390000004215.a.b.b.c.b.d ENSGT00390000008932.m ENSGT00940000156775.f ENSGT00940000157833.h.b ENSGT00390000003781.e.a ENSGT00390000013846.a.b ENSGT00940000158338 ENSGT00940000155565.a Turbot DUPLICATION Turbot MODERN SPECIES ENSSMAG00000027883 mpdu1b (ENSSMAG00000025891) sox19b (ENSSMAG00000027838) eif4a1a (ENSSMAG00000027864) senp3b (ENSSMAG00000022587) ENSSMAG00000008346 ENSSMAG00000008384 ENSSMAG00000031259 mtmr1a (ENSSMAG00000008446) cd99l2 (ENSSMAG00000008701) ENSSMAG00000008715 ENSSMAG00000026134 alox12 (ENSSMAG00000008807) ENSSMAG00000036163 ENSSMAG00000008861 ENSSMAG00000029151 ##22 ENSSMAG00000025799 ENSSMAG00000008905 gal3st4 (ENSSMAG00000008917) ENSSMAG00000008934 ENSSMAG00000035338 ENSSMAG00000023216 ENSSMAG00000008981 ENSSMAG00000009017 ENSSMAG00000009084 ENSSMAG00000009089 ENSSMAG00000021486 ENSSMAG00000009095 ENSSMAG00000003841 ENSSMAG00000003790 ENSSMAG00000003781 Turbot MODERN SPECIES ENSSMAG00000000859 hsc70 (ENSSMAG00000000804) ##31 ctrl (ENSSMAG00000031795) lin37 (ENSSMAG00000000776) hspb6 (ENSSMAG00000034763) psenen (ENSSMAG00000000756) ENSSMAG00000000741 ENSSMAG00000000734 ENSSMAG00000027598 ENSSMAG00000000733 APLP1 (ENSSMAG00000000720) ENSSMAG00000000708 kirrel3l (ENSSMAG00000000695) nphs1 (ENSSMAG00000000684) ENSSMAG00000000675 ENSSMAG00000035179 ##22 ENSSMAG00000025049 ##22 ENSSMAG00000000597 ##22 ENSSMAG00000026223 ENSSMAG00000000558 ENSSMAG00000000543 ENSSMAG00000031766 ENSSMAG00000032344 ENSSMAG00000000528 ENSSMAG00000035943 ENSSMAG00000027713 ENSSMAG00000000370 ENSSMAG00000000343 ENSSMAG00000000325 ENSSMAG00000029108 c4b (ENSSMAG00000000287) Carangaria_A ANCESTRAL SPECIES 9 ENSGT00940000154494.a ENSGT01020000230438.D ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT00940000180579 ENSGT00940000154616.b ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.a ##22 ENSGT00940000175477 ENSGT00980000198681 ENSGT00940000153695.C ENSGT00670000099472 ENSGT00940000175641 ENSGT00390000004215.a.b.b.c.b.d ENSGT00390000008932.m ENSGT00390000008932.n ENSGT00940000156775.f ENSGT00940000157833.h.b ENSGT00970000198403 ENSGT00390000003781.e.a ENSGT00390000013846.a.b Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 17 ENSLCAG00010008257 ENSLCAG00010008266 lin37 (ENSLCAG00010008271) proser3 (ENSLCAG00010008276) hspb6 (ENSLCAG00010008286) psenen (ENSLCAG00010008291) ENSLCAG00010008302 ENSLCAG00010008321 ENSLCAG00010008326 ENSLCAG00010008331 APLP1 (ENSLCAG00010008337) ENSLCAG00010008347 kirrel3l (ENSLCAG00010008402) nphs1 (ENSLCAG00010008536) ENSLCAG00010008556 ENSLCAG00010008565 ##22 ENSLCAG00010008570 ##22 ENSLCAG00010008580 ##22 ENSLCAG00010008608 ENSLCAG00010008612 ENSLCAG00010008616 ENSLCAG00010008618 ENSLCAG00010008620 csnk2a1 (ENSLCAG00010008641) ENSLCAG00010008682 pon1 (ENSLCAG00010008684) kcnk5b (ENSLCAG00010008687) ENSLCAG00010008694 ENSLCAG00010008702 csnk2b (ENSLCAG00010008709) AIF1 (ENSLCAG00010008733) Barramundi perch MODERN SPECIES 525 dcaf7 (ENSLCAG00010014416) ENSLCAG00010014414 TACO1 (ENSLCAG00010014413) pth3r (ENSLCAG00010014411) rundc3ab (ENSLCAG00010014409) ENSLCAG00010014408 ndufa4b (ENSLCAG00010014407) ENSLCAG00010014403 SPOP (ENSLCAG00010014399) ENSLCAG00010014396 ENSLCAG00010014395 ##22 ENSLCAG00010014392 ##22 ENSLCAG00010014367 ENSLCAG00010014361 ##22 ENSLCAG00010014358 ##22 ngfrb (ENSLCAG00010014352) slc4a1b (ENSLCAG00010014348) ENSLCAG00010014346 atxn7l3b (ENSLCAG00010014342) ENSLCAG00010013976 Eupercaria ANCESTRAL SPECIES 10 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00710000106813.B.b ENSGT00940000182154 ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Ballan wrasse MODERN SPECIES 564 ENSLBEG00000017933 ##22 ENSLBEG00000017840 ##22 dtnbp1a (ENSLBEG00000017801) ENSLBEG00000017785 ENSLBEG00000017734 aldh2.2 (ENSLBEG00000017638) rbm42 (ENSLBEG00000017547) ppox (ENSLBEG00000017409) ENSLBEG00000017367 fbl (ENSLBEG00000017315) sacm1lb (ENSLBEG00000017257) lyplal1 (ENSLBEG00000017215) tgfb2 (ENSLBEG00000017156) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Eupecaria_C ANCESTRAL SPECIES 171 ENSGT00950000183155.a.a.a.a.b.t.a ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.t.a ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b.s ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Large yellow croaker MODERN SPECIES pcgf1 (ENSLCRG00005016372) lbx2 (ENSLCRG00005016380) nanos1 (ENSLCRG00005016382) ctsz (ENSLCRG00005016384) dcaf7 (ENSLCRG00005016386) KCNH2 (ENSLCRG00005016392) TACO1 (ENSLCRG00005016394) pth3r (ENSLCRG00005016399) rundc3ab (ENSLCRG00005016409) ENSLCRG00005016416 ndufa4b (ENSLCRG00005016421) ENSLCRG00005016422 SPOP (ENSLCRG00005016426) ENSLCRG00005016460 ENSLCRG00005000066 ENSLCRG00005000070 ##22 ENSLCRG00005000072 ENSLCRG00005000076 ##22 RNF157 (ENSLCRG00005000115) srsf2a (ENSLCRG00005000152) st6galnac1.1 (ENSLCRG00005000155) ENSLCRG00005000162 st6galnac1.1 (ENSLCRG00005000168) olig2 (ENSLCRG00005000176) ENSLCRG00005000179 olig1 (ENSLCRG00005000184) ENSLCRG00005000188 ENSLCRG00005000192 fhip1b (ENSLCRG00005000200) CNGA4 (ENSLCRG00005000213) TRAPPC10 (ENSLCRG00005000269) European seabass DUPLICATION European seabass MODERN SPECIES 11 ENSDLAG00005012200 ENSDLAG00005012218 pth3r (ENSDLAG00005012235) rundc3ab (ENSDLAG00005012756) ENSDLAG00005012843 ENSDLAG00005013020 ndufa4b (ENSDLAG00005012859) ENSDLAG00005012916 ENSDLAG00005013004 ENSDLAG00005034472 ##22 ENSDLAG00005013022 ##22 ENSDLAG00005029060 ENSDLAG00005013039 ENSDLAG00005003795 ENSDLAG00005013082 ##22 ENSDLAG00005031240 ##22 ENSDLAG00005013164 ngfrb (ENSDLAG00005013172) slc4a1b (ENSDLAG00005013213) SMARCD2 (ENSDLAG00005026806) psmc5 (ENSDLAG00005014093) ENSDLAG00005014419 ENSDLAG00005014539 ENSDLAG00005015769 ENSDLAG00005015779 znf281b (ENSDLAG00005028441) KCNJ3 (ENSDLAG00005031329) ENSDLAG00005015834 nmt1b (ENSDLAG00005016090) ENSDLAG00005016185 ENSDLAG00005016229 European seabass MODERN SPECIES 11 ENSDLAG00005026794 ENSDLAG00005007525 pgap3 (ENSDLAG00005007633) erbb2 (ENSDLAG00005007841) ENSDLAG00005012196 ENSDLAG00005012200 ENSDLAG00005012218 pth3r (ENSDLAG00005012235) rundc3ab (ENSDLAG00005012756) ENSDLAG00005012843 ENSDLAG00005013020 ndufa4b (ENSDLAG00005012859) ENSDLAG00005012916 ENSDLAG00005013004 ENSDLAG00005034472 ##22 ENSDLAG00005013022 ##22 ENSDLAG00005029060 ENSDLAG00005013039 ENSDLAG00005003795 ENSDLAG00005013082 ##22 ENSDLAG00005031240 ##22 ENSDLAG00005013164 ngfrb (ENSDLAG00005013172) slc4a1b (ENSDLAG00005013213) SMARCD2 (ENSDLAG00005026806) psmc5 (ENSDLAG00005014093) ENSDLAG00005014419 ENSDLAG00005014539 ENSDLAG00005015769 ENSDLAG00005015779 znf281b (ENSDLAG00005028441) Perciformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Cottioidei ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Lumpfish MODERN SPECIES 17 dpys (ENSCLMG00005019065) zfpm2a (ENSCLMG00005019064) ENSCLMG00005019062 oxr1b (ENSCLMG00005019019) sqlea (ENSCLMG00005019016) ENSCLMG00005019012 ubr5 (ENSCLMG00005014152) ENSCLMG00005014115 azin1a (ENSCLMG00005014108) atp6v1c1a (ENSCLMG00005013987) ENSCLMG00005013982 rnf144b (ENSCLMG00005013981) NOD1 (ENSCLMG00005013964) enpp2 (ENSCLMG00005013915) taf2 (ENSCLMG00005013505) ENSCLMG00005013470 ##22 ENSCLMG00005013469 ENSCLMG00005013468 ENSCLMG00005013093 ggctb (ENSCLMG00005013062) SLC6A20 (ENSCLMG00005013060) sacm1lb (ENSCLMG00005013058) fbl (ENSCLMG00005013056) dyrk1b (ENSCLMG00005012892) ppox (ENSCLMG00005012772) rbm42 (ENSCLMG00005012765) ALDH2 (ENSCLMG00005010723) OSBPL10 (ENSCLMG00005010697) gpd1l (ENSCLMG00005010695) TCAIM (ENSCLMG00005010692) cnot10 (ENSCLMG00005009351) Perciformes_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b ##22 Channel bull blenny DUPLICATION Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 7 ENSCGOG00000015502 hsc70 (ENSCGOG00000010742) ##31 ctrl (ENSCGOG00000010486) ENSCGOG00000010485 lin37 (ENSCGOG00000010484) hspb6 (ENSCGOG00000010483) psenen (ENSCGOG00000010477) ENSCGOG00000010462 ENSCGOG00000010460 ENSCGOG00000010455 APLP1 (ENSCGOG00000010235) ENSCGOG00000010180 kirrel3l (ENSCGOG00000009246) nphs1 (ENSCGOG00000009181) ENSCGOG00000009164 ENSCGOG00000009156 ##22 ENSCGOG00000009148 ##22 ENSCGOG00000009145 FCGBP (ENSCGOG00000009098) ##22 ENSCGOG00000009088 ENSCGOG00000009083 ENSCGOG00000009061 ENSCGOG00000009058 ENSCGOG00000009055 csnk2a1 (ENSCGOG00000006242) ENSCGOG00000006126 pon1 (ENSCGOG00000006105) ENSCGOG00000006103 kcnk5b (ENSCGOG00000006072) ENSCGOG00000005953 csnk2b (ENSCGOG00000005903) Channel bull blenny MODERN SPECIES 7 hsc70 (ENSCGOG00000010742) ##31 ctrl (ENSCGOG00000010486) ENSCGOG00000010485 lin37 (ENSCGOG00000010484) hspb6 (ENSCGOG00000010483) psenen (ENSCGOG00000010477) ENSCGOG00000010462 ENSCGOG00000010460 ENSCGOG00000010455 APLP1 (ENSCGOG00000010235) ENSCGOG00000010180 kirrel3l (ENSCGOG00000009246) nphs1 (ENSCGOG00000009181) ENSCGOG00000009164 ENSCGOG00000009156 ##22 ENSCGOG00000009148 ##22 ENSCGOG00000009145 FCGBP (ENSCGOG00000009098) ##22 ENSCGOG00000009088 ENSCGOG00000009083 ENSCGOG00000009061 ENSCGOG00000009058 ENSCGOG00000009055 csnk2a1 (ENSCGOG00000006242) ENSCGOG00000006126 pon1 (ENSCGOG00000006105) ENSCGOG00000006103 kcnk5b (ENSCGOG00000006072) ENSCGOG00000005953 csnk2b (ENSCGOG00000005903) AIF1 (ENSCGOG00000005887) Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 10 dcaf7 (ENSCGOG00000008523) ENSCGOG00000008519 TACO1 (ENSCGOG00000008518) pth3r (ENSCGOG00000008516) rundc3ab (ENSCGOG00000019834) ENSCGOG00000019830 ndufa4b (ENSCGOG00000019827) SPOP (ENSCGOG00000019771) ENSCGOG00000019770 ENSCGOG00000019769 ENSCGOG00000019744 ##22 ENSCGOG00000019737 ENSCGOG00000019736 ENSCGOG00000019713 ##22 ENSCGOG00000019711 ENSCGOG00000019690 ##22 ngfrb (ENSCGOG00000019685) slc4a1b (ENSCGOG00000019646) ENSCGOG00000019645 atxn7l3b (ENSCGOG00000019642) SMARCD2 (ENSCGOG00000018497) psmc5 (ENSCGOG00000017692) MPP3 (ENSCGOG00000017270) ENSCGOG00000017238 ENSCGOG00000017231 znf281b (ENSCGOG00000017224) ENSCGOG00000017220 ENSCGOG00000017178 nmt1b (ENSCGOG00000017093) lrrc51 (ENSCGOG00000017087) pcdh15b (ENSCGOG00000015259) Channel bull blenny MODERN SPECIES 10 pgap3 (ENSCGOG00000010087) erbb2 (ENSCGOG00000008638) dcaf7 (ENSCGOG00000008523) ENSCGOG00000008519 TACO1 (ENSCGOG00000008518) pth3r (ENSCGOG00000008516) rundc3ab (ENSCGOG00000019834) ENSCGOG00000019830 ndufa4b (ENSCGOG00000019827) SPOP (ENSCGOG00000019771) ENSCGOG00000019770 ENSCGOG00000019769 ENSCGOG00000019744 ##22 ENSCGOG00000019737 ENSCGOG00000019736 ENSCGOG00000019713 ##22 ENSCGOG00000019711 ENSCGOG00000019690 ##22 ngfrb (ENSCGOG00000019685) slc4a1b (ENSCGOG00000019646) ENSCGOG00000019645 atxn7l3b (ENSCGOG00000019642) SMARCD2 (ENSCGOG00000018497) psmc5 (ENSCGOG00000017692) MPP3 (ENSCGOG00000017270) ENSCGOG00000017238 ENSCGOG00000017231 znf281b (ENSCGOG00000017224) ENSCGOG00000017220 ENSCGOG00000017178 nmt1b (ENSCGOG00000017093) Otomorpha ANCESTRAL SPECIES 640 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.eb ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.b.b Clupeiformes ANCESTRAL SPECIES 218 ENSGT00390000006486 ENSGT00940000159791 ENSGT00940000159308 ENSGT00940000156079 ENSGT00940000157280.l ENSGT00940000154725.j ENSGT00940000154725.i ENSGT00960000192667 ENSGT00940000162035 ENSGT00950000183151.b ENSGT00940000159821 ENSGT00390000015641 ENSGT00940000160858 ENSGT00390000002381.a ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00550000075134 ENSGT00530000063817.a ENSGT00730000110871.a.a.a.a.hb ENSGT00730000110871.a.a.a.a.ib ENSGT00930000151026 ENSGT00940000164558.k ENSGT00530000063721.A ENSGT00940000155689 ENSGT00940000159209 ENSGT00390000016136 ENSGT00390000018319.b.b ENSGT00950000182907.a.a.jc ENSGT00530000063760.b.g.b ENSGT00550000075028 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 12 TRAPPC9 (ENSDCDG00000019463) kcnk9 (ENSDCDG00000019437) COL22A1 (ENSDCDG00000019430) FAM135B (ENSDCDG00000019383) KHDRBS3 (ENSDCDG00000019365) ENSDCDG00000019358 ENSDCDG00000019354 ST3GAL1 (ENSDCDG00000019349) ENSDCDG00000019344 ENSDCDG00000019341 cpsf1 (ENSDCDG00000009746) adck5 (ENSDCDG00000008813) ctdp1 (ENSDCDG00000008603) KCNG2 (ENSDCDG00000008590) SLC66A2 (ENSDCDG00000008583) ENSDCDG00000008575 ##22 ENSDCDG00000008568 ##22 dus3l (ENSDCDG00000008471) MTERF1 (ENSDCDG00000008454) ENSDCDG00000008447 ENSDCDG00000008428 cyp51 (ENSDCDG00000006795) ENSDCDG00000006518 ENSDCDG00000006347 ENSDCDG00000006084 ENSDCDG00000006033 ENSDCDG00000006001 cops8 (ENSDCDG00000005868) ENSDCDG00000005832 gpr39 (ENSDCDG00000005820) ENSDCDG00000005779 Denticle herring MODERN SPECIES 306 ENSDCDG00000033057 SLC66A2 (ENSDCDG00000033055) ENSDCDG00000033053 ##22 ENSDCDG00000033052 ##22 dus3l (ENSDCDG00000033034) MTERF1 (ENSDCDG00000033028) ENSDCDG00000033025 ENSDCDG00000033022 cyp51 (ENSDCDG00000032926) ENSDCDG00000032909 ENSDCDG00000032905 ENSDCDG00000032903 Atlantic herring MODERN SPECIES 10 SLC25A13 (ENSCHAG00000020352) DYNC1I1 (ENSCHAG00000015887) pdk4 (ENSCHAG00000015516) asb4 (ENSCHAG00000015505) PPP1R9A (ENSCHAG00000014840) sgce (ENSCHAG00000014405) ST3GAL1 (ENSCHAG00000014073) ENSCHAG00000014046 ENSCHAG00000013952 cpsf1 (ENSCHAG00000013393) adck5 (ENSCHAG00000013359) ENSCHAG00000013351 ctdp1 (ENSCHAG00000013338) KCNG2 (ENSCHAG00000013214) SLC66A2 (ENSCHAG00000013195) ENSCHAG00000013168 ##22 ENSCHAG00000013055 ##22 dus3l (ENSCHAG00000012827) MTERF1 (ENSCHAG00000012810) ENSCHAG00000012764 ENSCHAG00000012733 cyp51 (ENSCHAG00000012421) ENSCHAG00000012104 krit1 (ENSCHAG00000011927) ankib1a (ENSCHAG00000011555) nfyc (ENSCHAG00000011068) KCNQ4 (ENSCHAG00000010571) jtb (ENSCHAG00000010548) cart4 (ENSCHAG00000010522) ANP32E (ENSCHAG00000010456) ENSCHAG00000010432 Otophysi ANCESTRAL SPECIES 530 ENSGT01060000248786.a ENSGT00940000164679.eb.c.b ENSGT00950000183155.a.a.a.a.a.b ##22 Cyprinoidei DUPLICATION Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 306 ENSGT00940000164679.eb.c.b.d.b ENSGT00950000183155.a.a.a.a.a.b.o.b.b ##22 ENSGT00940000164679.eb.c.b.d.a ENSGT00950000183155.a.a.a.a.a.b.o.a ##22 Cyprininae ANCESTRAL SPECIES 1101 ENSGT00950000183155.a.a.a.a.a.b.o.b.b ##22 ENSGT00940000164679.eb.c.b.d.a.a.a ENSGT00950000183155.a.a.a.a.a.b.o.a ##22 ENSGT00940000164679.eb.c.b.c.b.a Cyprininae_a ANCESTRAL SPECIES 1206 ENSGT00950000183155.a.a.a.a.a.b.o.a ##22 ENSGT00940000164679.eb.c.b.c.b.a Common carp reference DUPLICATION Common carp reference MODERN SPECIES 39 ENSCCRG00000059145 psenen (ENSCCRG00000059184) ENSCCRG00000056745 ENSCCRG00000045218 ENSCCRG00000072408 zgc:171592 (ENSCCRG00000073301) zgc:171592 (ENSCCRG00000045223) zgc:171592 (ENSCCRG00000052580) APLP1 (ENSCCRG00000037237) ENSCCRG00000045240 kirrel3l (ENSCCRG00000004294) nphs1 (ENSCCRG00000008678) ENSCCRG00000064778 ENSCCRG00000073145 ENSCCRG00000040479 ##22 ENSCCRG00000054924 ##22 ENSCCRG00000015712 ENSCCRG00000057124 ENSCCRG00000071722 ostn (ENSCCRG00000019453) ENSCCRG00000019457 sst1.1 (ENSCCRG00000074143) ENSCCRG00000019862 rhbdd1 (ENSCCRG00000019865) ENSCCRG00000019871 NYAP2 (ENSCCRG00000063933) ENSCCRG00000004181 mffa (ENSCCRG00000057546) mrpl44 (ENSCCRG00000070414) agfg1a (ENSCCRG00000028758) ENSCCRG00000028717 Common carp reference MODERN SPECIES 44 ENSCCRG00000076022 ENSCCRG00000061018 ENSCCRG00000063879 ENSCCRG00000079944 mrpl38 (ENSCCRG00000037116) ENSCCRG00000075350 wbp2 (ENSCCRG00000061715) bccip (ENSCCRG00000058200) dhx32a (ENSCCRG00000016887) FANK1 (ENSCCRG00000044408) ENSCCRG00000074212 ADAM12 (ENSCCRG00000043944) INSYN2A (ENSCCRG00000005546) dock1 (ENSCCRG00000004504) ENSCCRG00000046582 ENSCCRG00000066241 ##22 ENSCCRG00000047689 ##22 ENSCCRG00000042581 ENSCCRG00000062967 ENSCCRG00000050932 ENSCCRG00000013670 ENSCCRG00000013694 ENSCCRG00000012275 ENSCCRG00000028372 ##22 ENSCCRG00000028364 CLRN3 (ENSCCRG00000042477) ENSCCRG00000065140 ENSCCRG00000050959 Goldfish MODERN SPECIES 30 selenou1b (ENSCARG00000028587) ENSCARG00000028581 mmp21 (ENSCARG00000028569) PTPRE (ENSCARG00000028044) foxi1 (ENSCARG00000027985) ENSCARG00000027975 ENSCARG00000027960 wbp2 (ENSCARG00000027935) bccip (ENSCARG00000027912) dhx32a (ENSCARG00000027743) FANK1 (ENSCARG00000027651) ADAM12 (ENSCARG00000026453) INSYN2A (ENSCARG00000026378) dock1 (ENSCARG00000013391) ENSCARG00000013046 ENSCARG00000013032 ##22 ENSCARG00000013024 ##22 ENSCARG00000013019 ENSCARG00000013013 ENSCARG00000013007 bub3 (ENSCARG00000012996) HMX3 (ENSCARG00000012992) ACADSB (ENSCARG00000012778) ENSCARG00000012768 ENSCARG00000012761 ENSCARG00000012730 CHAT (ENSCARG00000012691) slc18a3b (ENSCARG00000012685) rgrb (ENSCARG00000012678) lrit1b (ENSCARG00000012669) vclb (ENSCARG00000012626) Zebrafish MODERN SPECIES 3 gpx9 (ENSDARG00000003077) fbxl15 (ENSDARG00000005284) ENSDARG00000076702 ENSDARG00000106669 ENSDARG00000109276 FDXR (ENSDARG00000089369) mrpl38 (ENSDARG00000039667) ENSDARG00000077098 wbp2 (ENSDARG00000056605) bccip (ENSDARG00000004948) dhx32a (ENSDARG00000077461) FANK1 (ENSDARG00000039657) ADAM12 (ENSDARG00000116062) INSYN2A (ENSDARG00000107296) dock1 (ENSDARG00000099093) ENSDARG00000104642 ##22 ENSDARG00000103650 ENSDARG00000116430 ##22 ENSDARG00000104324 ENSDARG00000102895 ENSDARG00000098736 ENSDARG00000100106 ENSDARG00000113076 ##22 ENSDARG00000098256 ENSDARG00000103634 ENSDARG00000101930 zgc:112964 (ENSDARG00000101200) ##22 foxi1 (ENSDARG00000104566) CLRN3 (ENSDARG00000100465) PTPRE (ENSDARG00000015891) ebf3a (ENSDARG00000100244) Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 278 ENSGT00950000183155.a.a.a.a.a.b.p ##22 ENSGT00940000164679.eb.c.b.c.b.a ENSGT01060000248786.a.a ENSGT00940000164679.eb.c.b.c.b.b ENSGT00950000183155.a.a.a.a.a.b.o.b.a ##22 Zebrafish MODERN SPECIES 3 FANK1 (ENSDARG00000039657) ADAM12 (ENSDARG00000116062) INSYN2A (ENSDARG00000107296) dock1 (ENSDARG00000099093) ENSDARG00000104642 ##22 ENSDARG00000103650 ENSDARG00000116430 ##22 ENSDARG00000104324 ENSDARG00000102895 ENSDARG00000098736 ENSDARG00000100106 ENSDARG00000113076 ##22 ENSDARG00000098256 ENSDARG00000103634 ENSDARG00000101930 zgc:112964 (ENSDARG00000101200) ##22 foxi1 (ENSDARG00000104566) CLRN3 (ENSDARG00000100465) PTPRE (ENSDARG00000015891) ebf3a (ENSDARG00000100244) ENSDARG00000103294 glrx3 (ENSDARG00000098785) ENSDARG00000099060 TCERG1L (ENSDARG00000109963) ppp2r2d (ENSDARG00000102009) bnip3 (ENSDARG00000099961) ENSDARG00000100708 dpysl4 (ENSDARG00000103490) KIF5B (ENSDARG00000103394) EPC1 (ENSDARG00000101579) ENSDARG00000099898 Cyprininae ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b.o.b.a ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b.o.b.a ##22 Golden-line barbel MODERN SPECIES 368 FDXR (ENSSGRG00000043075) ENSSGRG00000043078 wbp2 (ENSSGRG00000043079) bccip (ENSSGRG00000043081) dhx32a (ENSSGRG00000043137) ADAM12 (ENSSGRG00000043138) dock1 (ENSSGRG00000043216) INSYN2A (ENSSGRG00000043279) ENSSGRG00000043284 zgc:112964 (ENSSGRG00000043285) ##22 ENSSGRG00000043286 ##22 foxi1 (ENSSGRG00000043287) ENSSGRG00000043288 ENSSGRG00000043289 PUM2 (ENSSGRG00000043331) tshr (ENSSGRG00000045795) Cyprinoidei ANCESTRAL SPECIES 306 ENSGT00940000164679.eb.c.b.d.b ENSGT00950000183155.a.a.a.a.a.b.o.b.b ##22 ENSGT00940000164679.eb.c.b.d.a ENSGT00950000183155.a.a.a.a.a.b.o.a ##22 Cyprininae ANCESTRAL SPECIES 1101 ENSGT00950000183155.a.a.a.a.a.b.o.b.b ##22 ENSGT00940000164679.eb.c.b.d.a.a.a ENSGT00950000183155.a.a.a.a.a.b.o.a ##22 ENSGT00940000164679.eb.c.b.c.b.a Goldfish MODERN SPECIES 30 ENSCARG00000028581 mmp21 (ENSCARG00000028569) PTPRE (ENSCARG00000028044) foxi1 (ENSCARG00000027985) ENSCARG00000027975 ENSCARG00000027960 wbp2 (ENSCARG00000027935) bccip (ENSCARG00000027912) dhx32a (ENSCARG00000027743) FANK1 (ENSCARG00000027651) ADAM12 (ENSCARG00000026453) INSYN2A (ENSCARG00000026378) dock1 (ENSCARG00000013391) ENSCARG00000013046 ENSCARG00000013032 ##22 ENSCARG00000013024 ##22 ENSCARG00000013019 ENSCARG00000013013 ENSCARG00000013007 bub3 (ENSCARG00000012996) HMX3 (ENSCARG00000012992) ACADSB (ENSCARG00000012778) ENSCARG00000012768 ENSCARG00000012761 ENSCARG00000012730 CHAT (ENSCARG00000012691) slc18a3b (ENSCARG00000012685) rgrb (ENSCARG00000012678) lrit1b (ENSCARG00000012669) vclb (ENSCARG00000012626) ENSCARG00000012614 Cyprininae_a ANCESTRAL SPECIES 1224 ENSGT00940000164679.eb.c.b.d.a.a.a ENSGT00950000183155.a.a.a.a.a.b.o.b.b ##22 Common carp reference MODERN SPECIES 44 ENSCCRG00000061018 ENSCCRG00000063879 ENSCCRG00000079944 mrpl38 (ENSCCRG00000037116) ENSCCRG00000075350 wbp2 (ENSCCRG00000061715) bccip (ENSCCRG00000058200) dhx32a (ENSCCRG00000016887) FANK1 (ENSCCRG00000044408) ENSCCRG00000074212 ADAM12 (ENSCCRG00000043944) INSYN2A (ENSCCRG00000005546) dock1 (ENSCCRG00000004504) ENSCCRG00000046582 ENSCCRG00000066241 ##22 ENSCCRG00000047689 ##22 ENSCCRG00000042581 ENSCCRG00000062967 ENSCCRG00000050932 ENSCCRG00000013670 ENSCCRG00000013694 ENSCCRG00000012275 ENSCCRG00000028372 ##22 ENSCCRG00000028364 CLRN3 (ENSCCRG00000042477) ENSCCRG00000065140 ENSCCRG00000050959 Zebrafish MODERN SPECIES 1100 ENSDARG00000110394 ENSDARG00000101012 ##22 Cyprinoidei ANCESTRAL SPECIES 278 ENSGT00950000183155.a.a.a.a.a.b.p ##22 ENSGT00940000164679.eb.c.b.c.b.a ENSGT01060000248786.a.a ENSGT00940000164679.eb.c.b.c.b.b ENSGT00950000183155.a.a.a.a.a.b.o.b.a ##22 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 ENSDARG00000077098 wbp2 (ENSDARG00000056605) bccip (ENSDARG00000004948) dhx32a (ENSDARG00000077461) FANK1 (ENSDARG00000039657) ADAM12 (ENSDARG00000116062) INSYN2A (ENSDARG00000107296) dock1 (ENSDARG00000099093) ENSDARG00000104642 ##22 ENSDARG00000103650 ENSDARG00000116430 ##22 ENSDARG00000104324 ENSDARG00000102895 ENSDARG00000098736 ENSDARG00000100106 ENSDARG00000113076 ##22 ENSDARG00000098256 ENSDARG00000103634 ENSDARG00000101930 zgc:112964 (ENSDARG00000101200) ##22 foxi1 (ENSDARG00000104566) CLRN3 (ENSDARG00000100465) PTPRE (ENSDARG00000015891) ebf3a (ENSDARG00000100244) ENSDARG00000103294 glrx3 (ENSDARG00000098785) ENSDARG00000099060 TCERG1L (ENSDARG00000109963) ppp2r2d (ENSDARG00000102009) bnip3 (ENSDARG00000099961) ENSDARG00000100708 Zebrafish MODERN SPECIES 3 ENSDARG00000076702 ENSDARG00000106669 ENSDARG00000109276 FDXR (ENSDARG00000089369) mrpl38 (ENSDARG00000039667) ENSDARG00000077098 wbp2 (ENSDARG00000056605) bccip (ENSDARG00000004948) dhx32a (ENSDARG00000077461) FANK1 (ENSDARG00000039657) ADAM12 (ENSDARG00000116062) INSYN2A (ENSDARG00000107296) dock1 (ENSDARG00000099093) ENSDARG00000104642 ##22 ENSDARG00000103650 ENSDARG00000116430 ##22 ENSDARG00000104324 ENSDARG00000102895 ENSDARG00000098736 ENSDARG00000100106 ENSDARG00000113076 ##22 ENSDARG00000098256 ENSDARG00000103634 ENSDARG00000101930 zgc:112964 (ENSDARG00000101200) ##22 foxi1 (ENSDARG00000104566) CLRN3 (ENSDARG00000100465) PTPRE (ENSDARG00000015891) ebf3a (ENSDARG00000100244) ENSDARG00000103294 glrx3 (ENSDARG00000098785) Cyprininae ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b.p ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.a.b.p ##22 Golden-line barbel MODERN SPECIES 3690 ENSSGRG00000003010 ##22 Spotted gar MODERN SPECIES 663 irgf1 (ENSLOCG00000004112) ENSLOCG00000004098 ##31 CTRL (ENSLOCG00000004085) ENSLOCG00000018168 lin37 (ENSLOCG00000004067) ENSLOCG00000004055 ENSLOCG00000004031 ENSLOCG00000004010 ENSLOCG00000004000 ENSLOCG00000003984 APLP1 (ENSLOCG00000003972) ENSLOCG00000003953 kirrel3l (ENSLOCG00000003936) nphs1 (ENSLOCG00000003902) ENSLOCG00000003866 ENSLOCG00000003848 ##22 ENSLOCG00000003831 ##22 ENSLOCG00000003818 ENSLOCG00000003804 ENSLOCG00000003787 ENSLOCG00000003775 ENSLOCG00000003762 ENSLOCG00000003748 ENSLOCG00000003736 ENSLOCG00000003726 ENSLOCG00000003712 ENSLOCG00000003700 ENSLOCG00000003668 ##22 pimr50 (ENSLOCG00000003651) haus5 (ENSLOCG00000003630) ENSLOCG00000003618 Vertebrata ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Gnathostomata ANCESTRAL SPECIES 1532 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b Euteleostomi ANCESTRAL SPECIES 546 ENSGT00940000160603 ENSGT00940000159510 ENSGT00940000153695.C ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b Sarcopterygii ANCESTRAL SPECIES 460 ENSGT00390000000586 ENSGT00940000160603 ENSGT00940000159510 ENSGT00940000153695.C ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT01030000236274 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1721 ENSLACG00000010620 DNMT3B (ENSLACG00000008388) MAPRE1 (ENSLACG00000007816) CYP2D6 (ENSLACG00000007344) ENSLACG00000006097 ENSLACG00000004195 ##22 ENSLACG00000003383 ENSLACG00000001762 ENSLACG00000001237 Coelacanth MODERN SPECIES 727 ENSLACG00000003244 ENSLACG00000004221 UPK1A (ENSLACG00000005346) ENSLACG00000006168 ENSLACG00000008387 ##22 PSENEN (ENSLACG00000008935) ENSLACG00000009087 kirrel3l (ENSLACG00000009894) ENSLACG00000010652 ENSLACG00000011112 ENSLACG00000011550 ENSLACG00000011717 TRAPPC6A (ENSLACG00000011897) ENSLACG00000012091 ENSLACG00000013156 ##22 ENSLACG00000013298 ##22 HPN (ENSLACG00000013595) fbl (ENSLACG00000014561) DYRK1B (ENSLACG00000014855) kcnj21 (ENSLACG00000014974) Tetrapoda ANCESTRAL SPECIES 327 ENSGT00950000183155.a.b.b.j.b ##22 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT01030000236274 Amniota ANCESTRAL SPECIES 170 ENSGT00940000164679 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT01030000236274 Mammalia ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Theria ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Marsupialia ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Tasmanian devil MODERN SPECIES 2 ZFP36 (ENSSHAG00000028445) ENSSHAG00000029128 ENSSHAG00000009341 ENSSHAG00000009504 TIMM50 (ENSSHAG00000023301) ENSSHAG00000023833 ENSSHAG00000026089 ENSSHAG00000003274 ENSSHAG00000032115 ENSSHAG00000030150 ##22 ENSSHAG00000029274 ENSSHAG00000002457 ENSSHAG00000028494 ENSSHAG00000026241 HPN (ENSSHAG00000021225) ENSSHAG00000005544 ##22 ENSSHAG00000005903 LGI4 (ENSSHAG00000029675) ENSSHAG00000002735 LSR (ENSSHAG00000002849) USF2 (ENSSHAG00000030028) ENSSHAG00000025430 ENSSHAG00000027680 ENSSHAG00000006551 FFAR1 (ENSSHAG00000006736) ENSSHAG00000006768 ENSSHAG00000006933 ENSSHAG00000007336 ENSSHAG00000007550 ENSSHAG00000007875 ENSSHAG00000025249 Sauria DUPLICATION Sauria ANCESTRAL SPECIES 45 ENSGT00990000203527.a.a.a.a ENSGT00990000203527.b ENSGT01100000263571 ENSGT00940000160297 ENSGT00390000013276 ENSGT00940000160272 ENSGT00950000183058.B ENSGT00530000063991.b ENSGT01100000263535.a.b ENSGT01020000230346.D ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000159269.g.a ENSGT00940000165494 ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727 ENSGT00940000164679 ENSGT00950000183155.a.b.b.j.a ##22 ENSGT00950000183155.a.b.b.k.b ##22 ENSGT00940000153695.C ENSGT00940000159510 ENSGT00940000160603 ENSGT00530000063252.b ENSGT00940000160881 ENSGT00940000155110 ENSGT00390000001986 ENSGT00390000002748 Archelosauria ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.c ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.c ##22 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 684 ENSPSIG00000006316 ##22 ENSPSIG00000007261 ENSPSIG00000007312 ##22 ENSPSIG00000008506 ENSPSIG00000008736 TPT1 (ENSPSIG00000008741) SLC25A30 (ENSPSIG00000009663) COG3 (ENSPSIG00000011130) ENSPSIG00000000167 SIAH3 (ENSPSIG00000012108) ZC3H13 (ENSPSIG00000012518) CPB2 (ENSPSIG00000013391) LCP1 (ENSPSIG00000016060) ENSPSIG00000000170 RUBCNL (ENSPSIG00000016612) Chinese turtle MODERN SPECIES 684 ENSPSIG00000006316 ##22 ENSPSIG00000007261 ENSPSIG00000007312 ##22 ENSPSIG00000008506 ENSPSIG00000008736 TPT1 (ENSPSIG00000008741) SLC25A30 (ENSPSIG00000009663) COG3 (ENSPSIG00000011130) ENSPSIG00000000167 SIAH3 (ENSPSIG00000012108) ZC3H13 (ENSPSIG00000012518) CPB2 (ENSPSIG00000013391) LCP1 (ENSPSIG00000016060) ENSPSIG00000000170 RUBCNL (ENSPSIG00000016612) Testudinoidea ANCESTRAL SPECIES 52 ENSGT00390000016319 ENSGT00940000161100 ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000155110 ENSGT00940000160881 ENSGT00530000063252.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00940000153695.C ENSGT01020000230346.D ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000159269.g.a.f ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000165494 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727.a ENSGT00940000163727.b ENSGT00940000164679 Testudinidae ANCESTRAL SPECIES 106 ENSGT00950000185155 ENSGT00940000159697 ENSGT00940000159269.g.a.f ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000165494.d ENSGT00940000165494.c ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727.a ENSGT00940000163727.b Goode s thornscrub tortoise MODERN SPECIES 122 ENSGEVG00005018983 ENSGEVG00005018899 ENSGEVG00005018874 HPN (ENSGEVG00005018848) ENSGEVG00005018767 ENSGEVG00005018722 ENSGEVG00005018697 ENSGEVG00005018650 ENSGEVG00005018543 ENSGEVG00005018279 ENSGEVG00005018206 ENSGEVG00005018068 ENSGEVG00005018014 ENSGEVG00005017992 ENSGEVG00005017973 ENSGEVG00005017961 ##22 ENSGEVG00005017947 ENSGEVG00005017932 ENSGEVG00005017902 ENSGEVG00005017767 FXYD1 (ENSGEVG00005017740) ENSGEVG00005017721 ENSGEVG00005017706 ENSGEVG00005017672 ENSGEVG00005016746 ##22 ENSGEVG00005016030 ##22 ENSGEVG00005015750 ##22 ENSGEVG00005015691 U2AF1L4 (ENSGEVG00005015617) ENSGEVG00005015586 ENSGEVG00005015575 Emydidae ANCESTRAL SPECIES 116 ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000159269.g.a.f.b ENSGT00940000159269.g.a.f.a.a ENSGT00940000165494.b ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000165494.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727.a ENSGT00940000163727.b ENSGT00940000164679 painted turtle MODERN SPECIES 822 ZC4H2 (ENSCPBG00000006980) ENSCPBG00000006975 ENSCPBG00000006968 ENSCPBG00000006962 GRAMD1A (ENSCPBG00000006943) SCN1B (ENSCPBG00000006928) ENSCPBG00000006922 ENSCPBG00000006917 ENSCPBG00000006910 ENSCPBG00000006904 HPN (ENSCPBG00000006881) ENSCPBG00000006867 ENSCPBG00000006860 ENSCPBG00000006785 ENSCPBG00000006776 ENSCPBG00000006774 ##22 ENSCPBG00000006768 ENSCPBG00000006755 ENSCPBG00000006736 ENSCPBG00000006729 FXYD1 (ENSCPBG00000006701) ENSCPBG00000006674 ENSCPBG00000006663 Lepidosauria ANCESTRAL SPECIES 51 ENSGT00940000160272 ENSGT00950000183058.B ENSGT00530000063991.b ENSGT01100000263535.a.b ENSGT00940000165447 ENSGT00940000166428 ENSGT00940000165943 ENSGT00930000151055 ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b ENSGT01020000230346.D ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000159269.g.a ENSGT00940000165494 ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727 ENSGT00940000164679 Episquamata ANCESTRAL SPECIES 62 ENSGT00940000165494 ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727 ENSGT00940000164679 Toxicofera ANCESTRAL SPECIES 34 ENSGT00940000166428 ENSGT00940000165943 ENSGT00930000151055 ENSGT00940000156204.vb ENSGT00950000182788.a.b.b.b.o.a ENSGT01020000230389.b.a.b.d.b.b.a.b.b ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b ENSGT01020000230346.D ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000159269.g.a ENSGT00960000192299 ENSGT00940000165494 ENSGT01030000236274.a ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000166428 ENSGT00940000165943 ENSGT00930000151055 ENSGT00940000156204.vb ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b ENSGT01020000230346.D ENSGT00940000161007.c ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 ENSGT00960000192299 ENSGT00940000165494 ENSGT01030000236274.a ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727 ENSGT00730000110943.A.d ENSGT00950000183155.a.b.b.j.a ##22 ENSGT00960000192846 ENSGT00940000153695.C ENSGT00940000159510 ENSGT00940000160603 ENSGT00530000063252.b ENSGT00940000160881 ENSGT00940000155110 ENSGT00390000001986 ENSGT00390000002748 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.c ##22 Blue-lipped sea krait MODERN SPECIES 3737 GRAMD1A (ENSLLTG00000002623) SCN1B (ENSLLTG00000002603) HPN (ENSLLTG00000002596) ENSLLTG00000002585 ##22 ENSLLTG00000002572 ##22 ENSLLTG00000002550 ##22 Indian cobra MODERN SPECIES 11 ENSNNAG00000015481 ENSNNAG00000015457 ENSNNAG00000015416 ENSNNAG00000015396 RBM42 (ENSNNAG00000015320) ENSNNAG00000015301 ENSNNAG00000015291 PSMC4 (ENSNNAG00000015276) GRAMD1A (ENSNNAG00000015207) SCN1B (ENSNNAG00000015198) ENSNNAG00000015176 HPN (ENSNNAG00000015149) ENSNNAG00000015132 ##22 ENSNNAG00000015125 ##22 ENSNNAG00000015112 ENSNNAG00000014950 ##22 ENSNNAG00000014928 ENSNNAG00000014919 ENSNNAG00000014901 FXYD1 (ENSNNAG00000014861) ENSNNAG00000014836 ENSNNAG00000014808 ENSNNAG00000014778 ##22 ENSNNAG00000014674 ##22 ENSNNAG00000014639 ENSNNAG00000014233 ##22 ENSNNAG00000014191 NFKBID (ENSNNAG00000014141) NPHS1 (ENSNNAG00000014019) ENSNNAG00000014001 APLP1 (ENSNNAG00000013942) Laterata ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.c ##22 Common wall lizard MODERN SPECIES 16 ENSPMRG00000008104 ENSPMRG00000008110 PSMC4 (ENSPMRG00000008125) GRAMD1A (ENSPMRG00000008143) SCN1B (ENSPMRG00000008180) ENSPMRG00000008191 HPN (ENSPMRG00000008203) ENSPMRG00000008215 ENSPMRG00000008221 ENSPMRG00000008248 ENSPMRG00000008322 ENSPMRG00000014579 ENSPMRG00000014588 ENSPMRG00000014596 ENSPMRG00000014600 ENSPMRG00000014606 ##22 ENSPMRG00000014608 ENSPMRG00000014614 ENSPMRG00000014620 ENSPMRG00000014623 ENSPMRG00000014628 ENSPMRG00000014632 ENSPMRG00000014641 ##22 ENSPMRG00000014650 ##22 ENSPMRG00000014655 ##22 ENSPMRG00000014669 ##22 ENSPMRG00000014701 ##22 ENSPMRG00000014747 ENSPMRG00000014751 ENSPMRG00000014757 ##22 NFKBID (ENSPMRG00000014773) Sauria ANCESTRAL SPECIES 175 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 ENSGT01030000236274 Lepidosauria ANCESTRAL SPECIES 246 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 ENSGT01030000236274 Episquamata ANCESTRAL SPECIES 103 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 ENSGT01030000236274.a Toxicofera ANCESTRAL SPECIES 206 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000160272 ENSGT00950000183058.B ENSGT01100000263535.a.b ENSGT00940000165447 ENSGT00940000166428 ENSGT00940000165943 ENSGT00930000151055 ENSGT00940000156204.vb ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b ENSGT01020000230346.D ENSGT00940000161007.c ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 ENSGT00960000192299 ENSGT00940000165494 ENSGT01030000236274.a ENSGT00950000183155.a.a.a.a.b.c ##22 ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00940000153062.C ENSGT00940000163727 ENSGT00730000110943.A.d ENSGT00950000183155.a.b.b.j.a ##22 ENSGT00960000192846 ENSGT00940000153695.C ENSGT00940000159510 ENSGT00940000160603 ENSGT00530000063252.b Elapidae_a ANCESTRAL SPECIES 125 ENSGT00950000183058.B ENSGT01100000263535.a.b ENSGT00940000165447 ENSGT00940000166428 ENSGT00940000165943 ENSGT00930000151055 ENSGT00940000156204.vb.a ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b ENSGT01020000230346.D ENSGT00940000161007.c ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00960000192299 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 Acanthophiinae ANCESTRAL SPECIES 71 ENSGT00940000160272 ENSGT00950000183058.B ENSGT01100000263535.a.b ENSGT00940000166428 ENSGT00940000165943 ENSGT00930000151055 ENSGT00940000156204.vb.a ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b ENSGT01020000230346.D ENSGT00940000161007.c ENSGT00390000018560.a.b ENSGT00960000192299 ENSGT00940000159697 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.d ##22 ENSGT00940000165494.g ENSGT01030000236274.a ENSGT00940000153062.A.a ENSGT00940000159793.e.a ENSGT00990000209743 Mainland tiger snake MODERN SPECIES 247 ENSNSUG00000016111 ENSNSUG00000016112 MAG (ENSNSUG00000016113) ENSNSUG00000016115 ENSNSUG00000016117 RBM42 (ENSNSUG00000016118) COX6B1 (ENSNSUG00000016119) ENSNSUG00000016120 ENSNSUG00000016215 ENSNSUG00000016216 GRAMD1A (ENSNSUG00000016217) SCN1B (ENSNSUG00000016334) ENSNSUG00000016335 ENSNSUG00000016337 ENSNSUG00000016338 ##22 ENSNSUG00000016339 ##22 ENSNSUG00000016340 ENSNSUG00000016341 ENSNSUG00000016343 FXYD1 (ENSNSUG00000016344) Eastern brown snake MODERN SPECIES 115 GAPDHS (ENSPTXG00000014872) LSR (ENSPTXG00000014871) MAG (ENSPTXG00000014869) ENSPTXG00000014868 ENSPTXG00000014867 RBM42 (ENSPTXG00000014865) ENSPTXG00000014864 ENSPTXG00000014775 ENSPTXG00000014774 PSMC4 (ENSPTXG00000014773) GRAMD1A (ENSPTXG00000014772) SCN1B (ENSPTXG00000014771) ENSPTXG00000014770 HPN (ENSPTXG00000014769) ENSPTXG00000014768 ##22 ENSPTXG00000014767 ##22 ENSPTXG00000014766 ##22 ENSPTXG00000014765 ENSPTXG00000014764 ENSPTXG00000014763 ENSPTXG00000014762 ENSPTXG00000014761 ENSPTXG00000014760 ENSPTXG00000014759 ENSPTXG00000014758 Blue-lipped sea krait MODERN SPECIES 3737 GRAMD1A (ENSLLTG00000002623) SCN1B (ENSLLTG00000002603) HPN (ENSLLTG00000002596) ENSLLTG00000002585 ##22 ENSLLTG00000002572 ##22 ENSLLTG00000002550 ##22 Indian cobra MODERN SPECIES 11 LSR (ENSNNAG00000015555) MAG (ENSNNAG00000015511) ENSNNAG00000015481 ENSNNAG00000015457 ENSNNAG00000015416 ENSNNAG00000015396 RBM42 (ENSNNAG00000015320) ENSNNAG00000015301 ENSNNAG00000015291 PSMC4 (ENSNNAG00000015276) GRAMD1A (ENSNNAG00000015207) SCN1B (ENSNNAG00000015198) ENSNNAG00000015176 HPN (ENSNNAG00000015149) ENSNNAG00000015132 ##22 ENSNNAG00000015125 ##22 ENSNNAG00000015112 ENSNNAG00000014950 ##22 ENSNNAG00000014928 ENSNNAG00000014919 ENSNNAG00000014901 FXYD1 (ENSNNAG00000014861) ENSNNAG00000014836 ENSNNAG00000014808 ENSNNAG00000014778 ##22 ENSNNAG00000014674 ##22 ENSNNAG00000014639 ENSNNAG00000014233 ##22 ENSNNAG00000014191 NFKBID (ENSNNAG00000014141) NPHS1 (ENSNNAG00000014019) Actinopterygii ANCESTRAL SPECIES 668 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b Reedfish MODERN SPECIES 8 ENSECRG00000020376 TBC1D2B (ENSECRG00000020363) snupn (ENSECRG00000020330) snx33 (ENSECRG00000020308) ENSECRG00000020296 lingo1b (ENSECRG00000020285) RBPMS2 (ENSECRG00000020260) ENSECRG00000020242 ENSECRG00000020215 ENSECRG00000020184 ENSECRG00000020129 sult2st3 (ENSECRG00000020099) ATP4A (ENSECRG00000018976) tmem147 (ENSECRG00000018852) gapdhs (ENSECRG00000018813) ENSECRG00000018768 ##22 ENSECRG00000018732 hpn (ENSECRG00000018680) ENSECRG00000018602 ENSECRG00000018551 ENSECRG00000018511 ##22 ENSECRG00000018460 ##22 ENSECRG00000018429 ENSECRG00000018402 ENSECRG00000018378 ENSECRG00000018343 ENSECRG00000018318 ENSECRG00000018195 ##22 ENSECRG00000018095 ##22 ENSECRG00000018071 ENSECRG00000017977 ##22 Neopterygii ANCESTRAL SPECIES 93 ENSGT01050000244883.A.a.a.b ENSGT00390000010337.A ENSGT00950000182952.E ENSGT00950000182904.a.a.b ENSGT00940000166443 ENSGT00390000003568 ENSGT00950000183007.b ENSGT00940000163304 ENSGT01100000263586 ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b ENSGT00980000198998 ENSGT00990000205757 ENSGT00940000153695.C ENSGT00940000153062.C ENSGT00940000166706 ENSGT00940000160297 ENSGT00940000160272 ENSGT00390000013276 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 663 si:dkey-211g8.6 (ENSLOCG00000005278) iglon5 (ENSLOCG00000005297) usf2 (ENSLOCG00000005321) etfb (ENSLOCG00000005340) lim2.4 (ENSLOCG00000005359) ENSLOCG00000005374 ENSLOCG00000005391 ENSLOCG00000005424 ENSLOCG00000005442 ENSLOCG00000005456 ENSLOCG00000005470 ENSLOCG00000005482 SLFN5 (ENSLOCG00000005511) ENSLOCG00000005527 ENSLOCG00000005542 ENSLOCG00000005564 ##22 ENSLOCG00000005599 ENSLOCG00000017674 ENSLOCG00000005621 xrcc1 (ENSLOCG00000005639) drd2l (ENSLOCG00000005675) ENSLOCG00000005698 ethe1 (ENSLOCG00000005717) PHLDB3 (ENSLOCG00000005741) ENSLOCG00000005756 ENSLOCG00000005776 si:dkey-211g8.1 (ENSLOCG00000017675) ENSLOCG00000005806 s100v2 (ENSLOCG00000005826) dcst2 (ENSLOCG00000005838) ENSLOCG00000005851 Spotted gar MODERN SPECIES 663 ENSLOCG00000003748 ENSLOCG00000003736 ENSLOCG00000003726 ENSLOCG00000003712 ENSLOCG00000003700 ENSLOCG00000003668 ##22 pimr50 (ENSLOCG00000003651) haus5 (ENSLOCG00000003630) ENSLOCG00000003618 CNFN (ENSLOCG00000003611) sult2st3 (ENSLOCG00000003588) si:ch73-343g19.4 (ENSLOCG00000003572) ATP4A (ENSLOCG00000003550) gapdhs (ENSLOCG00000003537) tmem147 (ENSLOCG00000003521) ENSLOCG00000003495 ##22 ENSLOCG00000003478 ENSLOCG00000003465 hpn (ENSLOCG00000003452) ENSLOCG00000003436 ENSLOCG00000003417 ENSLOCG00000003392 ENSLOCG00000003379 rbm42 (ENSLOCG00000003368) Osteoglossocephalai ANCESTRAL SPECIES 4 ENSGT00390000002748 ENSGT00390000001986 ENSGT00940000161100 ENSGT00390000016319 ENSGT00940000163756.c.b ENSGT00390000005702 ENSGT00940000154616.b ENSGT00530000063252.b ENSGT00940000155418.a.b.b ENSGT00940000160603 ENSGT00940000159510 ENSGT00530000068431 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.b.b ##22 ENSGT00950000183155.a.b.a.a.b.c.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b ENSGT00940000153062.C ENSGT00940000153695.C ENSGT00990000205757 ENSGT00980000198998 ENSGT00940000166706 ENSGT00940000160297 ENSGT00940000160272 ENSGT00390000013276 ENSGT00940000166159 ENSGT00940000166537 ENSGT00950000183007.a.b.i ENSGT00390000008744 ENSGT00550000074792.b ENSGT00940000160345 Clupeocephala ANCESTRAL SPECIES 587 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.b Otomorpha ANCESTRAL SPECIES 640 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.eb ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.b.b Clupeiformes ANCESTRAL SPECIES 183 ENSGT00390000018316.a.e ENSGT00940000159427 ENSGT01100000263491.a.a.c.a ENSGT00390000012628.k.e.a.a ENSGT00950000183092.b.a.a ENSGT00660000095569.d ENSGT00940000160871.d.a ENSGT00730000111283.b ENSGT00390000011708.b ENSGT00940000164679.eb ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.b.b ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000158253.t.a ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000155348.B.d ENSGT00940000160643.j ENSGT00940000159914 ENSGT01100000263507.E.a.a.a.b.a.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.a.b.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00940000169682 Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES ENSCHAG00000004114 sap30bp (ENSCHAG00000004144) itgb4 (ENSCHAG00000004532) zgc:194990 (ENSCHAG00000012102) ENSCHAG00000012114 unk (ENSCHAG00000012125) UNC13D (ENSCHAG00000012176) wbp2 (ENSCHAG00000012199) ENSCHAG00000012213 mrpl38 (ENSCHAG00000012228) FDXR (ENSCHAG00000012254) PNMT (ENSCHAG00000012710) ENSCHAG00000012779 ENSCHAG00000012989 ##22 ENSCHAG00000013190 ENSCHAG00000013218 ##22 ENSCHAG00000013491 ##22 ENSCHAG00000013505 ##22 ENSCHAG00000013525 ##22 ENSCHAG00000013594 becn1 (ENSCHAG00000013623) ENSCHAG00000013831 ENSCHAG00000014505 RNF157 (ENSCHAG00000014516) lrrc59 (ENSCHAG00000014692) nat9 (ENSCHAG00000014732) ENSCHAG00000014986 GRIN2C (ENSCHAG00000015022) rab40b (ENSCHAG00000015219) cox11 (ENSCHAG00000015243) ENSCHAG00000015310 Atlantic herring MODERN SPECIES COPS3 (ENSCHAG00000003434) CDR2L (ENSCHAG00000004097) ENSCHAG00000004114 sap30bp (ENSCHAG00000004144) itgb4 (ENSCHAG00000004532) zgc:194990 (ENSCHAG00000012102) ENSCHAG00000012114 unk (ENSCHAG00000012125) UNC13D (ENSCHAG00000012176) wbp2 (ENSCHAG00000012199) ENSCHAG00000012213 mrpl38 (ENSCHAG00000012228) FDXR (ENSCHAG00000012254) PNMT (ENSCHAG00000012710) ENSCHAG00000012779 ENSCHAG00000012989 ##22 ENSCHAG00000013190 ENSCHAG00000013218 ##22 ENSCHAG00000013491 ##22 ENSCHAG00000013505 ##22 ENSCHAG00000013525 ##22 ENSCHAG00000013594 becn1 (ENSCHAG00000013623) ENSCHAG00000013831 ENSCHAG00000014505 RNF157 (ENSCHAG00000014516) lrrc59 (ENSCHAG00000014692) nat9 (ENSCHAG00000014732) ENSCHAG00000014986 GRIN2C (ENSCHAG00000015022) rab40b (ENSCHAG00000015219) Atlantic herring MODERN SPECIES nif3l1 (ENSCHAG00000001183) ENSCHAG00000001103 tbx6 (ENSCHAG00000001035) zgc:92040 (ENSCHAG00000000918) eif3c (ENSCHAG00000000653) ppp4cb (ENSCHAG00000017047) ENSCHAG00000017027 zgc:123217 (ENSCHAG00000016993) aldoaa (ENSCHAG00000016767) ENSCHAG00000016757 ENSCHAG00000016747 ENSCHAG00000016682 ##22 ENSCHAG00000016666 ENSCHAG00000016662 PNMT (ENSCHAG00000016646) ENSCHAG00000016507 ##22 ENSCHAG00000016486 ENSCHAG00000016468 ENSCHAG00000016454 ENSCHAG00000016327 ENSCHAG00000016243 ENSCHAG00000016181 arg1 (ENSCHAG00000016135) p4ha1a (ENSCHAG00000014499) nudt13 (ENSCHAG00000014438) ENSCHAG00000014433 dnajc9 (ENSCHAG00000014425) ENSCHAG00000014378 raraa (ENSCHAG00000013998) ENSCHAG00000013981 ENSCHAG00000013965 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES zgc:194990 (ENSCHAG00000012102) ENSCHAG00000012114 unk (ENSCHAG00000012125) UNC13D (ENSCHAG00000012176) wbp2 (ENSCHAG00000012199) ENSCHAG00000012213 mrpl38 (ENSCHAG00000012228) FDXR (ENSCHAG00000012254) PNMT (ENSCHAG00000012710) ENSCHAG00000012779 ENSCHAG00000012989 ##22 ENSCHAG00000013190 ENSCHAG00000013218 ##22 ENSCHAG00000013491 ##22 ENSCHAG00000013505 ##22 ENSCHAG00000013525 ##22 ENSCHAG00000013594 becn1 (ENSCHAG00000013623) ENSCHAG00000013831 ENSCHAG00000014505 RNF157 (ENSCHAG00000014516) lrrc59 (ENSCHAG00000014692) nat9 (ENSCHAG00000014732) ENSCHAG00000014986 GRIN2C (ENSCHAG00000015022) rab40b (ENSCHAG00000015219) cox11 (ENSCHAG00000015243) ENSCHAG00000015310 HLF (ENSCHAG00000015322) ENSCHAG00000015336 ENSCHAG00000015359 Atlantic herring MODERN SPECIES TLCD3B (ENSCHAG00000002068) ENSCHAG00000002044 TAOK2 (ENSCHAG00000001385) cabp5a (ENSCHAG00000001213) nif3l1 (ENSCHAG00000001183) ENSCHAG00000001103 tbx6 (ENSCHAG00000001035) zgc:92040 (ENSCHAG00000000918) eif3c (ENSCHAG00000000653) ppp4cb (ENSCHAG00000017047) ENSCHAG00000017027 zgc:123217 (ENSCHAG00000016993) aldoaa (ENSCHAG00000016767) ENSCHAG00000016757 ENSCHAG00000016747 ENSCHAG00000016682 ##22 ENSCHAG00000016666 ENSCHAG00000016662 PNMT (ENSCHAG00000016646) ENSCHAG00000016507 ##22 ENSCHAG00000016486 ENSCHAG00000016468 ENSCHAG00000016454 ENSCHAG00000016327 ENSCHAG00000016243 ENSCHAG00000016181 arg1 (ENSCHAG00000016135) p4ha1a (ENSCHAG00000014499) nudt13 (ENSCHAG00000014438) ENSCHAG00000014433 dnajc9 (ENSCHAG00000014425) Atlantic herring MODERN SPECIES sap30bp (ENSCHAG00000004144) itgb4 (ENSCHAG00000004532) zgc:194990 (ENSCHAG00000012102) ENSCHAG00000012114 unk (ENSCHAG00000012125) UNC13D (ENSCHAG00000012176) wbp2 (ENSCHAG00000012199) ENSCHAG00000012213 mrpl38 (ENSCHAG00000012228) FDXR (ENSCHAG00000012254) PNMT (ENSCHAG00000012710) ENSCHAG00000012779 ENSCHAG00000012989 ##22 ENSCHAG00000013190 ENSCHAG00000013218 ##22 ENSCHAG00000013491 ##22 ENSCHAG00000013505 ##22 ENSCHAG00000013525 ##22 ENSCHAG00000013594 becn1 (ENSCHAG00000013623) ENSCHAG00000013831 ENSCHAG00000014505 RNF157 (ENSCHAG00000014516) lrrc59 (ENSCHAG00000014692) nat9 (ENSCHAG00000014732) ENSCHAG00000014986 GRIN2C (ENSCHAG00000015022) rab40b (ENSCHAG00000015219) cox11 (ENSCHAG00000015243) ENSCHAG00000015310 HLF (ENSCHAG00000015322) Otophysi ANCESTRAL SPECIES 519 ENSGT00940000164679.eb.c.a ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.b.b Characiphysae ANCESTRAL SPECIES 306 ENSGT00940000164679.eb.c.a ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.a.a.a.a.b Characiphysae_b ANCESTRAL SPECIES 338 ENSGT00940000164679.eb.c.a ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.a.a.a.a.b Characoidei ANCESTRAL SPECIES 483 ENSGT00940000164679.eb.c.a ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.a.a.a.a.a.b.a.b Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 265 ENSPNAG00000026004 ENSPNAG00000025993 ENSPNAG00000025977 ENSPNAG00000025964 ENSPNAG00000025951 ENSPNAG00000025944 ENSPNAG00000004829 ENSPNAG00000025910 ENSPNAG00000025881 pick1 (ENSPNAG00000005093) plbd1a (ENSPNAG00000006100) ENSPNAG00000025776 ENSPNAG00000025769 ENSPNAG00000006001 ENSPNAG00000025722 ENSPNAG00000025683 ##22 ENSPNAG00000005861 ##22 ENSPNAG00000025638 Red-bellied piranha MODERN SPECIES 265 ENSPNAG00000025993 ENSPNAG00000025977 ENSPNAG00000025964 ENSPNAG00000025951 ENSPNAG00000025944 ENSPNAG00000004829 ENSPNAG00000025910 ENSPNAG00000025881 pick1 (ENSPNAG00000005093) plbd1a (ENSPNAG00000006100) ENSPNAG00000025776 ENSPNAG00000025769 ENSPNAG00000006001 ENSPNAG00000025722 ENSPNAG00000025683 ##22 ENSPNAG00000005861 ##22 ENSPNAG00000025638 Red-bellied piranha MODERN SPECIES 766 ENSPNAG00000008665 ENSPNAG00000008650 ##22 ENSPNAG00000008605 ENSPNAG00000008589 Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 1079 ENSAMXG00000015013 ENSAMXG00000043233 ##22 Mexicana tetra MODERN SPECIES 466 ENSAMXG00000007819 ENSAMXG00000041905 ##22 Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 1271 ENSAMXG00000035861 ##22 ENSAMXG00000030040 ENSAMXG00000017248 ENSAMXG00000041632 ##22 Mexicana tetra MODERN SPECIES 1271 ENSAMXG00000035861 ##22 ENSAMXG00000030040 ENSAMXG00000017248 ENSAMXG00000041632 ##22 Electric eel MODERN SPECIES 684 xpnpep3 (ENSEEEG00000013586) EP300 (ENSEEEG00000013587) cbx7a (ENSEEEG00000013588) desi1a (ENSEEEG00000013589) ENSEEEG00000013590 ENSEEEG00000013591 ENSEEEG00000013592 ENSEEEG00000013593 pick1 (ENSEEEG00000013594) plbd1a (ENSEEEG00000013610) ENSEEEG00000013660 ENSEEEG00000013661 ENSEEEG00000013668 ##22 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 311 ENSGT00950000183155.a.a.a.a.b.m ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.a ENSGT00950000183155.a.a.a.a.b.n.a ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.b.a Cyprininae ANCESTRAL SPECIES 1664 ENSGT00950000183155.a.a.a.a.b.m ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.a Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.m ##22 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 44 adkb (ENSCCRG00000025883) vclb (ENSCCRG00000067790) ENSCCRG00000066328 exoc7 (ENSCCRG00000077506) tvp23b (ENSCCRG00000070572) trim16 (ENSCCRG00000056501) ENSCCRG00000070412 ENSCCRG00000019069 ENSCCRG00000019072 ENSCCRG00000019079 hid1b (ENSCCRG00000011205) ENSCCRG00000066038 ENSCCRG00000019470 ENSCCRG00000080650 ENSCCRG00000050569 ##22 ENSCCRG00000077792 ##22 ENSCCRG00000011190 ENSCCRG00000059924 ##22 ENSCCRG00000019471 ENSCCRG00000079788 ENSCCRG00000056841 pax2b (ENSCCRG00000011742) gpx9 (ENSCCRG00000059259) fbxl15 (ENSCCRG00000068509) ENSCCRG00000076022 ENSCCRG00000061018 ENSCCRG00000063879 ENSCCRG00000079944 mrpl38 (ENSCCRG00000037116) ENSCCRG00000075350 wbp2 (ENSCCRG00000061715) Common carp reference MODERN SPECIES 44 DUSP13 (ENSCCRG00000071582) adkb (ENSCCRG00000025883) vclb (ENSCCRG00000067790) ENSCCRG00000066328 exoc7 (ENSCCRG00000077506) tvp23b (ENSCCRG00000070572) trim16 (ENSCCRG00000056501) ENSCCRG00000070412 ENSCCRG00000019069 ENSCCRG00000019072 ENSCCRG00000019079 hid1b (ENSCCRG00000011205) ENSCCRG00000066038 ENSCCRG00000019470 ENSCCRG00000080650 ENSCCRG00000050569 ##22 ENSCCRG00000077792 ##22 ENSCCRG00000011190 ENSCCRG00000059924 ##22 ENSCCRG00000019471 ENSCCRG00000079788 ENSCCRG00000056841 pax2b (ENSCCRG00000011742) gpx9 (ENSCCRG00000059259) fbxl15 (ENSCCRG00000068509) ENSCCRG00000076022 ENSCCRG00000061018 ENSCCRG00000063879 ENSCCRG00000079944 mrpl38 (ENSCCRG00000037116) ENSCCRG00000075350 Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 311 ENSGT00950000183155.a.a.a.a.b.m ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.a ENSGT00950000183155.a.a.a.a.b.n.a ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.b.a Cyprininae ANCESTRAL SPECIES 1105 ENSGT00940000156038.a.b.a.b.b.c.b.b.b.b ENSGT00940000164679.eb.c.a.d ENSGT00950000183155.a.a.a.a.b.n.a ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.b.a Goldfish DUPLICATION Goldfish MODERN SPECIES 30 ENSCARG00000007047 ADAMTS14 (ENSCARG00000006323) pald1a (ENSCARG00000006090) ndr2 (ENSCARG00000006055) NPFFR1 (ENSCARG00000014741) ppifb (ENSCARG00000014735) anxa11b (ENSCARG00000012968) ENSCARG00000012901 KCNMA1 (ENSCARG00000012482) ENSCARG00000012409 trim16 (ENSCARG00000012402) ENSCARG00000012396 FADS6 (ENSCARG00000012377) USH1G (ENSCARG00000012370) hid1b (ENSCARG00000012180) ENSCARG00000012080 ##22 ENSCARG00000012049 Goldfish MODERN SPECIES 1435 ENSCARG00000061896 ##22 Cyprininae_a ANCESTRAL SPECIES 819 ENSGT00940000156038.a.b.a.b.b.c.b.b.b.b ENSGT00940000164679.eb.c.a.d ENSGT00950000183155.a.a.a.a.b.n.a ##22 ENSGT00940000156038.a.b.a.b.b.c.b.a.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 197 adkb (ENSSGRG00000035412) vclb (ENSSGRG00000035543) ENSSGRG00000035710 ENSSGRG00000035711 exoc7 (ENSSGRG00000035758) tvp23b (ENSSGRG00000038751) trim16 (ENSSGRG00000038752) FADS6 (ENSSGRG00000038754) USH1G (ENSSGRG00000038755) hid1b (ENSSGRG00000038757) ENSSGRG00000038758 ENSSGRG00000038760 ENSSGRG00000038761 ENSSGRG00000038765 ENSSGRG00000038767 ENSSGRG00000038768 ##22 ENSSGRG00000038769 ##22 Golden-line barbel MODERN SPECIES 197 vclb (ENSSGRG00000035543) ENSSGRG00000035710 ENSSGRG00000035711 exoc7 (ENSSGRG00000035758) tvp23b (ENSSGRG00000038751) trim16 (ENSSGRG00000038752) FADS6 (ENSSGRG00000038754) USH1G (ENSSGRG00000038755) hid1b (ENSSGRG00000038757) ENSSGRG00000038758 ENSSGRG00000038760 ENSSGRG00000038761 ENSSGRG00000038765 ENSSGRG00000038767 ENSSGRG00000038768 ##22 ENSSGRG00000038769 ##22 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 44 ENSCCRG00000066328 exoc7 (ENSCCRG00000077506) tvp23b (ENSCCRG00000070572) trim16 (ENSCCRG00000056501) ENSCCRG00000070412 ENSCCRG00000019069 ENSCCRG00000019072 ENSCCRG00000019079 hid1b (ENSCCRG00000011205) ENSCCRG00000066038 ENSCCRG00000019470 ENSCCRG00000080650 ENSCCRG00000050569 ##22 ENSCCRG00000077792 ##22 ENSCCRG00000011190 ENSCCRG00000059924 ##22 ENSCCRG00000019471 ENSCCRG00000079788 ENSCCRG00000056841 pax2b (ENSCCRG00000011742) gpx9 (ENSCCRG00000059259) fbxl15 (ENSCCRG00000068509) ENSCCRG00000076022 ENSCCRG00000061018 ENSCCRG00000063879 ENSCCRG00000079944 mrpl38 (ENSCCRG00000037116) ENSCCRG00000075350 wbp2 (ENSCCRG00000061715) bccip (ENSCCRG00000058200) dhx32a (ENSCCRG00000016887) Common carp reference MODERN SPECIES 25 COMTD1 (ENSCCRG00000080495) VDAC2 (ENSCCRG00000019009) SAMD8 (ENSCCRG00000057898) ENSCCRG00000064051 ENSCCRG00000019180 DUSP29 (ENSCCRG00000066340) adkb (ENSCCRG00000019364) vclb (ENSCCRG00000022112) exoc7 (ENSCCRG00000037804) tvp23b (ENSCCRG00000063130) trim16 (ENSCCRG00000032028) ENSCCRG00000032021 hid1b (ENSCCRG00000019475) ENSCCRG00000001545 ENSCCRG00000063568 ENSCCRG00000019481 ##22 pax2b (ENSCCRG00000015132) ENSCCRG00000077877 fbxl15 (ENSCCRG00000008257) ENSCCRG00000059125 ENSCCRG00000055542 ENSCCRG00000011020 mrpl38 (ENSCCRG00000003184) ENSCCRG00000073412 wbp2 (ENSCCRG00000002878) bccip (ENSCCRG00000044336) dhx32a (ENSCCRG00000044261) ADAM12 (ENSCCRG00000044165) dock1 (ENSCCRG00000046574) INSYN2A (ENSCCRG00000042456) ENSCCRG00000005321 Cyprinoidei ANCESTRAL SPECIES 279 ENSGT00940000156038.a.b.a.b.b.c.b.b ENSGT00940000164679.eb.c.a ENSGT00950000183155.a.a.a.a.b.n.b ##22 ENSGT00940000156038.a.b.a.b.b.d.a ENSGT00940000156038.a.b.a.b.b.d.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.n.b.a ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.n.b.a ##22 Common carp reference DUPLICATION Common carp reference DUPLICATION Common carp reference MODERN SPECIES 44 ENSCCRG00000070822 cox10 (ENSCCRG00000068797) hs3st3b1b (ENSCCRG00000075874) pmp22b (ENSCCRG00000054008) TEKT3 (ENSCCRG00000013036) ENSCCRG00000053982 CDC42EP4 (ENSCCRG00000056011) SDK2 (ENSCCRG00000008251) RPL38 (ENSCCRG00000040963) ttyh2 (ENSCCRG00000012506) ENSCCRG00000012521 KIF19 (ENSCCRG00000046572) ENSCCRG00000046589 ENSCCRG00000042246 ##22 ENSCCRG00000050570 ##22 ENSCCRG00000061633 ##22 ENSCCRG00000077283 CDH10 (ENSCCRG00000016942) ENSCCRG00000056166 ENSCCRG00000071391 ENSCCRG00000072772 ENSCCRG00000074852 CDH18 (ENSCCRG00000042795) ENSCCRG00000068687 ENSCCRG00000051680 dpysl4 (ENSCCRG00000017474) ENSCCRG00000037255 bnip3 (ENSCCRG00000023608) ppp2r2d (ENSCCRG00000037789) TCERG1L (ENSCCRG00000067068) glrx3 (ENSCCRG00000027551) Common carp reference MODERN SPECIES 44 unk (ENSCCRG00000048888) ENSCCRG00000048876 ENSCCRG00000070822 cox10 (ENSCCRG00000068797) hs3st3b1b (ENSCCRG00000075874) pmp22b (ENSCCRG00000054008) TEKT3 (ENSCCRG00000013036) ENSCCRG00000053982 CDC42EP4 (ENSCCRG00000056011) SDK2 (ENSCCRG00000008251) RPL38 (ENSCCRG00000040963) ttyh2 (ENSCCRG00000012506) ENSCCRG00000012521 KIF19 (ENSCCRG00000046572) ENSCCRG00000046589 ENSCCRG00000042246 ##22 ENSCCRG00000050570 ##22 ENSCCRG00000061633 ##22 ENSCCRG00000077283 CDH10 (ENSCCRG00000016942) ENSCCRG00000056166 ENSCCRG00000071391 ENSCCRG00000072772 ENSCCRG00000074852 CDH18 (ENSCCRG00000042795) ENSCCRG00000068687 ENSCCRG00000051680 dpysl4 (ENSCCRG00000017474) ENSCCRG00000037255 bnip3 (ENSCCRG00000023608) ppp2r2d (ENSCCRG00000037789) Common carp reference MODERN SPECIES 44 ENSCCRG00000048876 ENSCCRG00000070822 cox10 (ENSCCRG00000068797) hs3st3b1b (ENSCCRG00000075874) pmp22b (ENSCCRG00000054008) TEKT3 (ENSCCRG00000013036) ENSCCRG00000053982 CDC42EP4 (ENSCCRG00000056011) SDK2 (ENSCCRG00000008251) RPL38 (ENSCCRG00000040963) ttyh2 (ENSCCRG00000012506) ENSCCRG00000012521 KIF19 (ENSCCRG00000046572) ENSCCRG00000046589 ENSCCRG00000042246 ##22 ENSCCRG00000050570 ##22 ENSCCRG00000061633 ##22 ENSCCRG00000077283 CDH10 (ENSCCRG00000016942) ENSCCRG00000056166 ENSCCRG00000071391 ENSCCRG00000072772 ENSCCRG00000074852 CDH18 (ENSCCRG00000042795) ENSCCRG00000068687 ENSCCRG00000051680 dpysl4 (ENSCCRG00000017474) ENSCCRG00000037255 bnip3 (ENSCCRG00000023608) ppp2r2d (ENSCCRG00000037789) TCERG1L (ENSCCRG00000067068) Cyprininae ANCESTRAL SPECIES 573 ENSGT00940000159360.d ENSGT00730000110939.b.g ENSGT00940000154768.A.a.h.b ENSGT00940000153771.A.g ENSGT00940000154768.A.a.g.a.a.c ENSGT00950000182696.B.a.b.c ENSGT00950000182894.A.b.b.j ENSGT00940000161435.a.a.a ENSGT00940000155761.c.b.f ENSGT00390000003718 ENSGT00950000183060.a.b.a.b.e.b ENSGT00940000160989.c ENSGT00940000158172.h ENSGT00940000156038.a.b.a.b.b.d.a ENSGT00940000164679.eb.c.a.c ENSGT00950000183155.a.a.a.a.b.n.b.b ##22 ENSGT00940000156038.a.b.a.a.b Goldfish MODERN SPECIES 680 ttyh2 (ENSCARG00000036386) KIF19 (ENSCARG00000036248) ABCA5 (ENSCARG00000035211) ENSCARG00000039925 ENSCARG00000039908 ENSCARG00000039863 ##22 ENSCARG00000039820 Cyprininae_a ANCESTRAL SPECIES 249 ENSGT00940000154768.A.a.h.b.a ENSGT00940000153771.A.g ENSGT00940000154768.A.a.g.a.a.c ENSGT00950000182696.B.a.b.c ENSGT00950000182894.A.b.b.i.a ENSGT00940000161131.a.b.m.b.b ENSGT00950000182894.A.b.b.j ENSGT00940000161435.a.a.a ENSGT00940000155761.c.b.f ENSGT00390000003718 ENSGT00950000183060.a.b.a.b.e.b ENSGT00940000163996.c ENSGT00940000160989.c ENSGT00940000158172.h ENSGT00940000156038.a.a ENSGT00950000183155.a.a.a.a.b.n.b.b ##22 Common carp reference MODERN SPECIES 25 ENSCCRG00000027999 ENSCCRG00000076247 cox10 (ENSCCRG00000058563) hs3st3b1b (ENSCCRG00000061723) pmp22b (ENSCCRG00000072492) TEKT3 (ENSCCRG00000015321) CDC42EP4 (ENSCCRG00000077368) ENSCCRG00000082274 SDK2 (ENSCCRG00000032314) ENSCCRG00000012489 rpl38 (ENSCCRG00000012495) ttyh2 (ENSCCRG00000056605) KIF19 (ENSCCRG00000006733) ENSCCRG00000006744 ENSCCRG00000050568 ENSCCRG00000046603 ##22 CDH10 (ENSCCRG00000034285) ENSCCRG00000060004 CDH18 (ENSCCRG00000042773) ENSCCRG00000065811 ENSCCRG00000043950 ENSCCRG00000072559 ENSCCRG00000051242 ENSCCRG00000062616 dpysl4 (ENSCCRG00000052032) ENSCCRG00000030503 bnip3 (ENSCCRG00000040039) ppp2r2d (ENSCCRG00000082487) TCERG1L (ENSCCRG00000067852) ENSCCRG00000027544 glrx3 (ENSCCRG00000014693) Golden-line barbel MODERN SPECIES 769 rpl38 (ENSSGRG00000017226) ttyh2 (ENSSGRG00000017227) ENSSGRG00000017230 KIF19 (ENSSGRG00000017231) ABCA5 (ENSSGRG00000017339) ENSSGRG00000018017 ENSSGRG00000018019 ##22 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 ENSDARG00000077706 cox10 (ENSDARG00000034309) hs3st3b1b (ENSDARG00000086645) pmp22b (ENSDARG00000060457) TEKT3 (ENSDARG00000045038) ENSDARG00000090910 CDC42EP4 (ENSDARG00000045036) SDK2 (ENSDARG00000060452) ENSDARG00000086420 ENSDARG00000096678 rpl38 (ENSDARG00000006413) ttyh2 (ENSDARG00000016934) ENSDARG00000074081 KIF19 (ENSDARG00000053026) abca5 (ENSDARG00000074041) ENSDARG00000097539 ##22 ENSDARG00000031588 ##22 ENSDARG00000097080 ENSDARG00000097826 ENSDARG00000096816 ENSDARG00000103903 CDH18 (ENSDARG00000102769) ENSDARG00000099898 EPC1 (ENSDARG00000101579) KIF5B (ENSDARG00000103394) dpysl4 (ENSDARG00000103490) ENSDARG00000100708 bnip3 (ENSDARG00000099961) ppp2r2d (ENSDARG00000102009) TCERG1L (ENSDARG00000109963) ENSDARG00000099060 Zebrafish MODERN SPECIES 3 cox10 (ENSDARG00000034309) hs3st3b1b (ENSDARG00000086645) pmp22b (ENSDARG00000060457) TEKT3 (ENSDARG00000045038) ENSDARG00000090910 CDC42EP4 (ENSDARG00000045036) SDK2 (ENSDARG00000060452) ENSDARG00000086420 ENSDARG00000096678 rpl38 (ENSDARG00000006413) ttyh2 (ENSDARG00000016934) ENSDARG00000074081 KIF19 (ENSDARG00000053026) abca5 (ENSDARG00000074041) ENSDARG00000097539 ##22 ENSDARG00000031588 ##22 ENSDARG00000097080 ENSDARG00000097826 ENSDARG00000096816 ENSDARG00000103903 CDH18 (ENSDARG00000102769) ENSDARG00000099898 EPC1 (ENSDARG00000101579) KIF5B (ENSDARG00000103394) dpysl4 (ENSDARG00000103490) ENSDARG00000100708 bnip3 (ENSDARG00000099961) ppp2r2d (ENSDARG00000102009) TCERG1L (ENSDARG00000109963) ENSDARG00000099060 glrx3 (ENSDARG00000098785) Euteleosteomorpha ANCESTRAL SPECIES 73 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00940000156993.c ENSGT00940000160739 ENSGT00940000157982.a.a Acanthomorphata ANCESTRAL SPECIES 60 ENSGT00940000159427 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00940000154268.k.b ENSGT00940000154376.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183046.a.b.k ENSGT00950000182883.a.a.b ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00940000156675.d ENSGT00940000157356 ENSGT00940000153249.a Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 10 ENSMMDG00005024348 ENSMMDG00005024346 mylpfb (ENSMMDG00005024344) pgap3 (ENSMMDG00005024338) erbb2 (ENSMMDG00005024319) dcaf7 (ENSMMDG00005024313) ENSMMDG00005024311 TACO1 (ENSMMDG00005024310) pth3r (ENSMMDG00005024308) rundc3ab (ENSMMDG00005024305) ENSMMDG00005024304 ndufa4b (ENSMMDG00005024302) ENSMMDG00005024301 SPOP (ENSMMDG00005024296) ENSMMDG00005024292 ENSMMDG00005024283 ##22 ENSMMDG00005024271 ##22 ENSMMDG00005024265 ##22 ngfrb (ENSMMDG00005024262) slc4a1b (ENSMMDG00005024239) ENSMMDG00005024237 atxn7l3b (ENSMMDG00005024235) SMARCD2 (ENSMMDG00005024054) psmc5 (ENSMMDG00005023958) MPP3 (ENSMMDG00005023854) ENSMMDG00005023811 ENSMMDG00005023804 znf281b (ENSMMDG00005023802) ENSMMDG00005023799 ENSMMDG00005023794 nmt1b (ENSMMDG00005023792) Pinecone sodierfish MODERN SPECIES 10 mylpfb (ENSMMDG00005024344) pgap3 (ENSMMDG00005024338) erbb2 (ENSMMDG00005024319) dcaf7 (ENSMMDG00005024313) ENSMMDG00005024311 TACO1 (ENSMMDG00005024310) pth3r (ENSMMDG00005024308) rundc3ab (ENSMMDG00005024305) ENSMMDG00005024304 ndufa4b (ENSMMDG00005024302) ENSMMDG00005024301 SPOP (ENSMMDG00005024296) ENSMMDG00005024292 ENSMMDG00005024283 ##22 ENSMMDG00005024271 ##22 ENSMMDG00005024265 ##22 ngfrb (ENSMMDG00005024262) slc4a1b (ENSMMDG00005024239) ENSMMDG00005024237 atxn7l3b (ENSMMDG00005024235) SMARCD2 (ENSMMDG00005024054) psmc5 (ENSMMDG00005023958) MPP3 (ENSMMDG00005023854) ENSMMDG00005023811 ENSMMDG00005023804 znf281b (ENSMMDG00005023802) ENSMMDG00005023799 ENSMMDG00005023794 nmt1b (ENSMMDG00005023792) ENSMMDG00005023791 ENSMMDG00005023790 Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00940000156675.d ENSGT00940000157356 ENSGT00940000153249.a Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Eupercaria ANCESTRAL SPECIES 10 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00710000106813.B.b ENSGT00940000182154 ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Ballan wrasse MODERN SPECIES 5 ENSLBEG00000022059 ENSLBEG00000022038 mylpfb (ENSLBEG00000022011) pgap3 (ENSLBEG00000021980) erbb2 (ENSLBEG00000021858) ENSLBEG00000021796 TACO1 (ENSLBEG00000021786) pth3r (ENSLBEG00000021706) rundc3ab (ENSLBEG00000021683) ENSLBEG00000021662 ndufa4b (ENSLBEG00000021652) ENSLBEG00000021626 SPOP (ENSLBEG00000021598) ENSLBEG00000021575 ENSLBEG00000021511 ENSLBEG00000021463 ##22 ngfrb (ENSLBEG00000021441) slc4a1b (ENSLBEG00000020948) ENSLBEG00000020716 atxn7l3b (ENSLBEG00000020685) SMARCD2 (ENSLBEG00000020464) psmc5 (ENSLBEG00000020388) MPP3 (ENSLBEG00000020280) ENSLBEG00000020229 ENSLBEG00000019672 ENSLBEG00000019580 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Perciformes ANCESTRAL SPECIES 9 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Perciformes_a ANCESTRAL SPECIES 8 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Pike perch DUPLICATION Pike perch DUPLICATION Pike perch MODERN SPECIES 3 ENSSLUG00000020617 ENSSLUG00000020610 pgap3 (ENSSLUG00000020593) erbb2 (ENSSLUG00000011455) dcaf7 (ENSSLUG00000011091) KCNH2 (ENSSLUG00000011040) TACO1 (ENSSLUG00000011036) pth3r (ENSSLUG00000010855) rundc3ab (ENSSLUG00000010810) ENSSLUG00000010795 ndufa4b (ENSSLUG00000010789) ENSSLUG00000010779 SPOP (ENSSLUG00000010764) ENSSLUG00000010757 ENSSLUG00000010753 ##22 ENSSLUG00000010747 ##22 ENSSLUG00000010648 ENSSLUG00000010624 ##22 ngfrb (ENSSLUG00000010602) slc4a1b (ENSSLUG00000010500) ENSSLUG00000010468 atxn7l3b (ENSSLUG00000010460) SMARCD2 (ENSSLUG00000008881) psmc5 (ENSSLUG00000007878) MPP3 (ENSSLUG00000007476) ENSSLUG00000007412 ENSSLUG00000007396 znf281b (ENSSLUG00000007388) ENSSLUG00000007382 ENSSLUG00000004464 nmt1b (ENSSLUG00000004228) Pike perch MODERN SPECIES 3 pgap3 (ENSSLUG00000020593) erbb2 (ENSSLUG00000011455) dcaf7 (ENSSLUG00000011091) KCNH2 (ENSSLUG00000011040) TACO1 (ENSSLUG00000011036) pth3r (ENSSLUG00000010855) rundc3ab (ENSSLUG00000010810) ENSSLUG00000010795 ndufa4b (ENSSLUG00000010789) ENSSLUG00000010779 SPOP (ENSSLUG00000010764) ENSSLUG00000010757 ENSSLUG00000010753 ##22 ENSSLUG00000010747 ##22 ENSSLUG00000010648 ENSSLUG00000010624 ##22 ngfrb (ENSSLUG00000010602) slc4a1b (ENSSLUG00000010500) ENSSLUG00000010468 atxn7l3b (ENSSLUG00000010460) SMARCD2 (ENSSLUG00000008881) psmc5 (ENSSLUG00000007878) MPP3 (ENSSLUG00000007476) ENSSLUG00000007412 ENSSLUG00000007396 znf281b (ENSSLUG00000007388) ENSSLUG00000007382 ENSSLUG00000004464 nmt1b (ENSSLUG00000004228) lrrc51 (ENSSLUG00000004205) pcdh15b (ENSSLUG00000002752) Pike perch MODERN SPECIES 3 ENSSLUG00000020620 ENSSLUG00000020617 ENSSLUG00000020610 pgap3 (ENSSLUG00000020593) erbb2 (ENSSLUG00000011455) dcaf7 (ENSSLUG00000011091) KCNH2 (ENSSLUG00000011040) TACO1 (ENSSLUG00000011036) pth3r (ENSSLUG00000010855) rundc3ab (ENSSLUG00000010810) ENSSLUG00000010795 ndufa4b (ENSSLUG00000010789) ENSSLUG00000010779 SPOP (ENSSLUG00000010764) ENSSLUG00000010757 ENSSLUG00000010753 ##22 ENSSLUG00000010747 ##22 ENSSLUG00000010648 ENSSLUG00000010624 ##22 ngfrb (ENSSLUG00000010602) slc4a1b (ENSSLUG00000010500) ENSSLUG00000010468 atxn7l3b (ENSSLUG00000010460) SMARCD2 (ENSSLUG00000008881) psmc5 (ENSSLUG00000007878) MPP3 (ENSSLUG00000007476) ENSSLUG00000007412 ENSSLUG00000007396 znf281b (ENSSLUG00000007388) ENSSLUG00000007382 ENSSLUG00000004464 Channel bull blenny MODERN SPECIES 10 pkmyt1 (ENSCGOG00000010224) ENSCGOG00000010222 mylpfb (ENSCGOG00000010095) pgap3 (ENSCGOG00000010087) erbb2 (ENSCGOG00000008638) dcaf7 (ENSCGOG00000008523) ENSCGOG00000008519 TACO1 (ENSCGOG00000008518) pth3r (ENSCGOG00000008516) rundc3ab (ENSCGOG00000019834) ENSCGOG00000019830 ndufa4b (ENSCGOG00000019827) SPOP (ENSCGOG00000019771) ENSCGOG00000019770 ENSCGOG00000019769 ENSCGOG00000019744 ##22 ENSCGOG00000019737 ENSCGOG00000019736 ENSCGOG00000019713 ##22 ENSCGOG00000019711 ENSCGOG00000019690 ##22 ngfrb (ENSCGOG00000019685) slc4a1b (ENSCGOG00000019646) ENSCGOG00000019645 atxn7l3b (ENSCGOG00000019642) SMARCD2 (ENSCGOG00000018497) psmc5 (ENSCGOG00000017692) MPP3 (ENSCGOG00000017270) ENSCGOG00000017238 ENSCGOG00000017231 znf281b (ENSCGOG00000017224) Cottioidei ANCESTRAL SPECIES 12 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Stickleback MODERN SPECIES 5 ENSGACG00000007217 mylpfb (ENSGACG00000007182) pgap3 (ENSGACG00000007172) erbb2 (ENSGACG00000007160) dcaf7 (ENSGACG00000007116) ENSGACG00000007113 TACO1 (ENSGACG00000007104) pth3r (ENSGACG00000007096) rundc3ab (ENSGACG00000007088) fam117ab (ENSGACG00000007083) ndufa4b (ENSGACG00000007080) ENSGACG00000007076 ENSGACG00000007075 SPOP (ENSGACG00000007059) NXPH3 (ENSGACG00000007057) ENSGACG00000007050 ##22 ngfrb (ENSGACG00000007042) slc4a1b (ENSGACG00000007018) ENSGACG00000007007 atxn7l3b (ENSGACG00000007000) SMARCD2 (ENSGACG00000006989) psmc5 (ENSGACG00000006910) MPP3 (ENSGACG00000006899) ENSGACG00000006895 ENSGACG00000006865 ENSGACG00000006864 ENSGACG00000006861 znf281b (ENSGACG00000006858) ENSGACG00000006851 ENSGACG00000006847 ENSGACG00000006844 Eupecaria_C DUPLICATION Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b.s ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.t.a ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b.s ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Large yellow croaker DUPLICATION Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 488 KIF19 (ENSLCRG00005021649) GRIN2C (ENSLCRG00005021644) rgs9b (ENSLCRG00005021635) GNA13 (ENSLCRG00005021631) ENSLCRG00005021630 BICRAL (ENSLCRG00005021628) tbcc (ENSLCRG00005021626) prph2a (ENSLCRG00005021624) ENSLCRG00005021619 timm23a (ENSLCRG00005021595) zgc:112285 (ENSLCRG00005021588) ENSLCRG00005021586 nat9 (ENSLCRG00005021582) lrrc59 (ENSLCRG00005021578) ENSLCRG00005021576 ENSLCRG00005021574 ##22 ENSLCRG00005021572 ##22 ngfrb (ENSLCRG00005021571) slc4a1b (ENSLCRG00005021212) atxn7l3b (ENSLCRG00005021203) SMARCD2 (ENSLCRG00005020509) psmc5 (ENSLCRG00005020295) MPP3 (ENSLCRG00005020251) muc13b (ENSLCRG00005020199) znf281b (ENSLCRG00005020198) ENSLCRG00005020197 ENSLCRG00005019896 nmt1b (ENSLCRG00005019881) ENSLCRG00005019878 pcdh15b (ENSLCRG00005018737) plce1 (ENSLCRG00005018000) Large yellow croaker MODERN SPECIES 488 GRIN2C (ENSLCRG00005021644) rgs9b (ENSLCRG00005021635) GNA13 (ENSLCRG00005021631) ENSLCRG00005021630 BICRAL (ENSLCRG00005021628) tbcc (ENSLCRG00005021626) prph2a (ENSLCRG00005021624) ENSLCRG00005021619 timm23a (ENSLCRG00005021595) zgc:112285 (ENSLCRG00005021588) ENSLCRG00005021586 nat9 (ENSLCRG00005021582) lrrc59 (ENSLCRG00005021578) ENSLCRG00005021576 ENSLCRG00005021574 ##22 ENSLCRG00005021572 ##22 ngfrb (ENSLCRG00005021571) slc4a1b (ENSLCRG00005021212) atxn7l3b (ENSLCRG00005021203) SMARCD2 (ENSLCRG00005020509) psmc5 (ENSLCRG00005020295) MPP3 (ENSLCRG00005020251) muc13b (ENSLCRG00005020199) znf281b (ENSLCRG00005020198) ENSLCRG00005020197 ENSLCRG00005019896 nmt1b (ENSLCRG00005019881) ENSLCRG00005019878 pcdh15b (ENSLCRG00005018737) plce1 (ENSLCRG00005018000) SLC35G1 (ENSLCRG00005017976) Large yellow croaker MODERN SPECIES nanos1 (ENSLCRG00005016382) ctsz (ENSLCRG00005016384) dcaf7 (ENSLCRG00005016386) KCNH2 (ENSLCRG00005016392) TACO1 (ENSLCRG00005016394) pth3r (ENSLCRG00005016399) rundc3ab (ENSLCRG00005016409) ENSLCRG00005016416 ndufa4b (ENSLCRG00005016421) ENSLCRG00005016422 SPOP (ENSLCRG00005016426) ENSLCRG00005016460 ENSLCRG00005000066 ENSLCRG00005000070 ##22 ENSLCRG00005000072 ENSLCRG00005000076 ##22 RNF157 (ENSLCRG00005000115) srsf2a (ENSLCRG00005000152) st6galnac1.1 (ENSLCRG00005000155) ENSLCRG00005000162 st6galnac1.1 (ENSLCRG00005000168) olig2 (ENSLCRG00005000176) ENSLCRG00005000179 olig1 (ENSLCRG00005000184) ENSLCRG00005000188 ENSLCRG00005000192 fhip1b (ENSLCRG00005000200) CNGA4 (ENSLCRG00005000213) TRAPPC10 (ENSLCRG00005000269) gdf3 (ENSLCRG00005000423) klf7b (ENSLCRG00005000425) European seabass MODERN SPECIES 11 ENSDLAG00005012196 ENSDLAG00005012200 ENSDLAG00005012218 pth3r (ENSDLAG00005012235) rundc3ab (ENSDLAG00005012756) ENSDLAG00005012843 ENSDLAG00005013020 ndufa4b (ENSDLAG00005012859) ENSDLAG00005012916 ENSDLAG00005013004 ENSDLAG00005034472 ##22 ENSDLAG00005013022 ##22 ENSDLAG00005029060 ENSDLAG00005013039 ENSDLAG00005003795 ENSDLAG00005013082 ##22 ENSDLAG00005031240 ##22 ENSDLAG00005013164 ngfrb (ENSDLAG00005013172) slc4a1b (ENSDLAG00005013213) SMARCD2 (ENSDLAG00005026806) psmc5 (ENSDLAG00005014093) ENSDLAG00005014419 ENSDLAG00005014539 ENSDLAG00005015769 ENSDLAG00005015779 znf281b (ENSDLAG00005028441) KCNJ3 (ENSDLAG00005031329) ENSDLAG00005015834 nmt1b (ENSDLAG00005016090) ENSDLAG00005016185 Eupecaria_C DUPLICATION Eupecaria_C ANCESTRAL SPECIES 171 ENSGT00950000183155.a.a.a.a.b.t.a ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 12 pgap3 (ENSSAUG00010025745) erbb2 (ENSSAUG00010025759) KCNH2 (ENSSAUG00010025877) TACO1 (ENSSAUG00010025878) pth3r (ENSSAUG00010025885) rundc3ab (ENSSAUG00010025979) ENSSAUG00010025982 ndufa4b (ENSSAUG00010025985) ENSSAUG00010002622 SPOP (ENSSAUG00010002640) ENSSAUG00010002657 ENSSAUG00010002661 ENSSAUG00010002688 ##22 ENSSAUG00010002757 ##22 ENSSAUG00010002971 ENSSAUG00010002990 ##22 ENSSAUG00010003119 ngfrb (ENSSAUG00010003121) slc4a1b (ENSSAUG00010003202) ENSSAUG00010004942 atxn7l3b (ENSSAUG00010004946) SMARCD2 (ENSSAUG00010004972) psmc5 (ENSSAUG00010006373) MPP3 (ENSSAUG00010006839) ENSSAUG00010007083 ENSSAUG00010007264 muc13b (ENSSAUG00010007265) znf281b (ENSSAUG00010007267) ENSSAUG00010007268 ENSSAUG00010007271 nmt1b (ENSSAUG00010007285) Gilthead seabream MODERN SPECIES 12 ENSSAUG00010025736 ENSSAUG00010025738 mylpfb (ENSSAUG00010025741) pgap3 (ENSSAUG00010025745) erbb2 (ENSSAUG00010025759) KCNH2 (ENSSAUG00010025877) TACO1 (ENSSAUG00010025878) pth3r (ENSSAUG00010025885) rundc3ab (ENSSAUG00010025979) ENSSAUG00010025982 ndufa4b (ENSSAUG00010025985) ENSSAUG00010002622 SPOP (ENSSAUG00010002640) ENSSAUG00010002657 ENSSAUG00010002661 ENSSAUG00010002688 ##22 ENSSAUG00010002757 ##22 ENSSAUG00010002971 ENSSAUG00010002990 ##22 ENSSAUG00010003119 ngfrb (ENSSAUG00010003121) slc4a1b (ENSSAUG00010003202) ENSSAUG00010004942 atxn7l3b (ENSSAUG00010004946) SMARCD2 (ENSSAUG00010004972) psmc5 (ENSSAUG00010006373) MPP3 (ENSSAUG00010006839) ENSSAUG00010007083 ENSSAUG00010007264 muc13b (ENSSAUG00010007265) znf281b (ENSSAUG00010007267) Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.t.a ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b.s ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 European seabass MODERN SPECIES 11 ENSDLAG00005007502 ENSDLAG00005026794 ENSDLAG00005007525 pgap3 (ENSDLAG00005007633) erbb2 (ENSDLAG00005007841) ENSDLAG00005012196 ENSDLAG00005012200 ENSDLAG00005012218 pth3r (ENSDLAG00005012235) rundc3ab (ENSDLAG00005012756) ENSDLAG00005012843 ENSDLAG00005013020 ndufa4b (ENSDLAG00005012859) ENSDLAG00005012916 ENSDLAG00005013004 ENSDLAG00005034472 ##22 ENSDLAG00005013022 ##22 ENSDLAG00005029060 ENSDLAG00005013039 ENSDLAG00005003795 ENSDLAG00005013082 ##22 ENSDLAG00005031240 ##22 ENSDLAG00005013164 ngfrb (ENSDLAG00005013172) slc4a1b (ENSDLAG00005013213) SMARCD2 (ENSDLAG00005026806) psmc5 (ENSDLAG00005014093) ENSDLAG00005014419 ENSDLAG00005014539 ENSDLAG00005015769 ENSDLAG00005015779 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.t.b ##22 Gilthead seabream MODERN SPECIES 12 ENSSAUG00010025738 mylpfb (ENSSAUG00010025741) pgap3 (ENSSAUG00010025745) erbb2 (ENSSAUG00010025759) KCNH2 (ENSSAUG00010025877) TACO1 (ENSSAUG00010025878) pth3r (ENSSAUG00010025885) rundc3ab (ENSSAUG00010025979) ENSSAUG00010025982 ndufa4b (ENSSAUG00010025985) ENSSAUG00010002622 SPOP (ENSSAUG00010002640) ENSSAUG00010002657 ENSSAUG00010002661 ENSSAUG00010002688 ##22 ENSSAUG00010002757 ##22 ENSSAUG00010002971 ENSSAUG00010002990 ##22 ENSSAUG00010003119 ngfrb (ENSSAUG00010003121) slc4a1b (ENSSAUG00010003202) ENSSAUG00010004942 atxn7l3b (ENSSAUG00010004946) SMARCD2 (ENSSAUG00010004972) psmc5 (ENSSAUG00010006373) MPP3 (ENSSAUG00010006839) ENSSAUG00010007083 ENSSAUG00010007264 muc13b (ENSSAUG00010007265) znf281b (ENSSAUG00010007267) ENSSAUG00010007268 Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Anabantaria ANCESTRAL SPECIES 18 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Anabantoidei ANCESTRAL SPECIES 10 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 ENSGT00940000153249.a Climbing perch DUPLICATION Climbing perch MODERN SPECIES 10 ENSATEG00000019706 ENSATEG00000019748 ENSATEG00000019753 ENSATEG00000019764 ENSATEG00000019808 ENSATEG00000019890 ENSATEG00000019921 ENSATEG00000019980 ENSATEG00000019992 rundc3ab (ENSATEG00000020006) ENSATEG00000025270 ndufa4b (ENSATEG00000020044) ENSATEG00000020061 SPOP (ENSATEG00000020080) ENSATEG00000020098 ENSATEG00000020157 ##22 ENSATEG00000020572 ENSATEG00000020644 ##22 ngfrb (ENSATEG00000020725) slc4a1b (ENSATEG00000020739) ENSATEG00000028197 atxn7l3b (ENSATEG00000020765) ENSATEG00000020779 psmc5 (ENSATEG00000020792) ENSATEG00000020833 ENSATEG00000020855 znf281b (ENSATEG00000020866) ENSATEG00000028425 ENSATEG00000020903 nmt1b (ENSATEG00000021016) ENSATEG00000021037 Climbing perch MODERN SPECIES 10 ENSATEG00000019753 ENSATEG00000019764 ENSATEG00000019808 ENSATEG00000019890 ENSATEG00000019921 ENSATEG00000019980 ENSATEG00000019992 rundc3ab (ENSATEG00000020006) ENSATEG00000025270 ndufa4b (ENSATEG00000020044) ENSATEG00000020061 SPOP (ENSATEG00000020080) ENSATEG00000020098 ENSATEG00000020157 ##22 ENSATEG00000020572 ENSATEG00000020644 ##22 ngfrb (ENSATEG00000020725) slc4a1b (ENSATEG00000020739) ENSATEG00000028197 atxn7l3b (ENSATEG00000020765) ENSATEG00000020779 psmc5 (ENSATEG00000020792) ENSATEG00000020833 ENSATEG00000020855 znf281b (ENSATEG00000020866) ENSATEG00000028425 ENSATEG00000020903 nmt1b (ENSATEG00000021016) ENSATEG00000021037 ENSATEG00000021073 plce1 (ENSATEG00000021137) Zig-zag eel MODERN SPECIES 10 ENSMAMG00000013484 ENSMAMG00000013488 ENSMAMG00000013497 pgap3 (ENSMAMG00000013504) erbb2 (ENSMAMG00000013531) ENSMAMG00000013636 ENSMAMG00000013656 ENSMAMG00000013684 pth3r (ENSMAMG00000013726) rundc3ab (ENSMAMG00000013812) ENSMAMG00000013934 ndufa4b (ENSMAMG00000013949) ENSMAMG00000013961 SPOP (ENSMAMG00000021915) ENSMAMG00000013998 ENSMAMG00000014020 ##22 ngfrb (ENSMAMG00000014053) slc4a1b (ENSMAMG00000014062) ENSMAMG00000014097 atxn7l3b (ENSMAMG00000014126) ENSMAMG00000014154 psmc5 (ENSMAMG00000014203) ENSMAMG00000014251 ENSMAMG00000014304 ENSMAMG00000014486 znf281b (ENSMAMG00000014508) ENSMAMG00000014516 ENSMAMG00000014551 nmt1b (ENSMAMG00000014663) ENSMAMG00000014685 ENSMAMG00000014719 Carangaria ANCESTRAL SPECIES 13 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Carangaria_A ANCESTRAL SPECIES 5 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Seriola ANCESTRAL SPECIES 1 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Greater amberjack DUPLICATION Greater amberjack MODERN SPECIES 27 ENSSDUG00000022914 mylpfb (ENSSDUG00000022903) pgap3 (ENSSDUG00000022901) erbb2 (ENSSDUG00000022891) dcaf7 (ENSSDUG00000022887) ENSSDUG00000022883 TACO1 (ENSSDUG00000022880) pth3r (ENSSDUG00000022857) rundc3ab (ENSSDUG00000022848) ENSSDUG00000022845 ndufa4b (ENSSDUG00000022841) ENSSDUG00000022836 SPOP (ENSSDUG00000022832) ENSSDUG00000022827 ENSSDUG00000022823 ENSSDUG00000022778 ##22 ENSSDUG00000022766 ENSSDUG00000022749 ##22 ngfrb (ENSSDUG00000022748) slc4a1b (ENSSDUG00000022741) ENSSDUG00000022735 atxn7l3b (ENSSDUG00000022728) SMARCD2 (ENSSDUG00000022719) psmc5 (ENSSDUG00000022708) MPP3 (ENSSDUG00000022679) ENSSDUG00000022655 muc13b (ENSSDUG00000022643) znf281b (ENSSDUG00000022637) ENSSDUG00000022634 ENSSDUG00000022624 nmt1b (ENSSDUG00000022616) Greater amberjack MODERN SPECIES 27 pgap3 (ENSSDUG00000022901) erbb2 (ENSSDUG00000022891) dcaf7 (ENSSDUG00000022887) ENSSDUG00000022883 TACO1 (ENSSDUG00000022880) pth3r (ENSSDUG00000022857) rundc3ab (ENSSDUG00000022848) ENSSDUG00000022845 ndufa4b (ENSSDUG00000022841) ENSSDUG00000022836 SPOP (ENSSDUG00000022832) ENSSDUG00000022827 ENSSDUG00000022823 ENSSDUG00000022778 ##22 ENSSDUG00000022766 ENSSDUG00000022749 ##22 ngfrb (ENSSDUG00000022748) slc4a1b (ENSSDUG00000022741) ENSSDUG00000022735 atxn7l3b (ENSSDUG00000022728) SMARCD2 (ENSSDUG00000022719) psmc5 (ENSSDUG00000022708) MPP3 (ENSSDUG00000022679) ENSSDUG00000022655 muc13b (ENSSDUG00000022643) znf281b (ENSSDUG00000022637) ENSSDUG00000022634 ENSSDUG00000022624 nmt1b (ENSSDUG00000022616) ENSSDUG00000022612 pcdh15b (ENSSDUG00000022286) Yellowtail amberjack MODERN SPECIES 2524 ENSSLDG00000018033 ENSSLDG00000018048 mylpfb (ENSSLDG00000018056) pgap3 (ENSSLDG00000018066) erbb2 (ENSSLDG00000018095) dcaf7 (ENSSLDG00000018199) ENSSLDG00000018215 TACO1 (ENSSLDG00000018233) pth3r (ENSSLDG00000018240) rundc3ab (ENSSLDG00000018257) ENSSLDG00000018289 ndufa4b (ENSSLDG00000018301) ENSSLDG00000018310 SPOP (ENSSLDG00000018331) ENSSLDG00000018345 ENSSLDG00000018363 ##22 ngfrb (ENSSLDG00000018405) slc4a1b (ENSSLDG00000018419) ENSSLDG00000018481 atxn7l3b (ENSSLDG00000018574) SMARCD2 (ENSSLDG00000018584) psmc5 (ENSSLDG00000018602) MPP3 (ENSSLDG00000018653) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 525 dcaf7 (ENSLCAG00010014416) ENSLCAG00010014414 TACO1 (ENSLCAG00010014413) pth3r (ENSLCAG00010014411) rundc3ab (ENSLCAG00010014409) ENSLCAG00010014408 ndufa4b (ENSLCAG00010014407) ENSLCAG00010014403 SPOP (ENSLCAG00010014399) ENSLCAG00010014396 ENSLCAG00010014395 ##22 ENSLCAG00010014392 ##22 ENSLCAG00010014367 ENSLCAG00010014361 ##22 ENSLCAG00010014358 ##22 ngfrb (ENSLCAG00010014352) slc4a1b (ENSLCAG00010014348) ENSLCAG00010014346 atxn7l3b (ENSLCAG00010014342) ENSLCAG00010013976 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 525 dcaf7 (ENSLCAG00010014416) ENSLCAG00010014414 TACO1 (ENSLCAG00010014413) pth3r (ENSLCAG00010014411) rundc3ab (ENSLCAG00010014409) ENSLCAG00010014408 ndufa4b (ENSLCAG00010014407) ENSLCAG00010014403 SPOP (ENSLCAG00010014399) ENSLCAG00010014396 ENSLCAG00010014395 ##22 ENSLCAG00010014392 ##22 ENSLCAG00010014367 ENSLCAG00010014361 ##22 ENSLCAG00010014358 ##22 ngfrb (ENSLCAG00010014352) slc4a1b (ENSLCAG00010014348) ENSLCAG00010014346 atxn7l3b (ENSLCAG00010014342) ENSLCAG00010013976 Barramundi perch MODERN SPECIES 525 dcaf7 (ENSLCAG00010014416) ENSLCAG00010014414 TACO1 (ENSLCAG00010014413) pth3r (ENSLCAG00010014411) rundc3ab (ENSLCAG00010014409) ENSLCAG00010014408 ndufa4b (ENSLCAG00010014407) ENSLCAG00010014403 SPOP (ENSLCAG00010014399) ENSLCAG00010014396 ENSLCAG00010014395 ##22 ENSLCAG00010014392 ##22 ENSLCAG00010014367 ENSLCAG00010014361 ##22 ENSLCAG00010014358 ##22 ngfrb (ENSLCAG00010014352) slc4a1b (ENSLCAG00010014348) ENSLCAG00010014346 atxn7l3b (ENSLCAG00010014342) ENSLCAG00010013976 Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00940000159427 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00940000156675.d Tongue sole MODERN SPECIES 398 pop5 (ENSCSEG00000011103) rnf10 (ENSCSEG00000011117) ENSCSEG00000011134 ENSCSEG00000011144 ctu1 (ENSCSEG00000011152) PXN (ENSCSEG00000011162) rnf181 (ENSCSEG00000011172) tmem150aa (ENSCSEG00000011177) kcnv2b (ENSCSEG00000011184) atp5meb (ENSCSEG00000011188) IDUA (ENSCSEG00000011197) tnksb (ENSCSEG00000011218) ENSCSEG00000011245 piwil2 (ENSCSEG00000011256) atad1a (ENSCSEG00000011330) ENSCSEG00000011341 ##22 ENSCSEG00000011349 ENSCSEG00000011362 GALNT9 (ENSCSEG00000011372) ENSCSEG00000011380 ENSCSEG00000011384 golga3 (ENSCSEG00000011402) ENSCSEG00000011453 ankle2 (ENSCSEG00000011458) pgam5 (ENSCSEG00000011471) zdhhc8b (ENSCSEG00000011480) dgcr8 (ENSCSEG00000011546) trmt2a (ENSCSEG00000011557) ENSCSEG00000011587 ranbp1 (ENSCSEG00000011592) tango2 (ENSCSEG00000011655) Turbot MODERN SPECIES 9 ENSSMAG00000017481 ENSSMAG00000017490 ENSSMAG00000027282 ENSSMAG00000024246 ENSSMAG00000025885 pgap3 (ENSSMAG00000033019) erbb2 (ENSSMAG00000017557) ENSSMAG00000017817 ENSSMAG00000017848 pth3r (ENSSMAG00000017862) ENSSMAG00000018020 ENSSMAG00000018102 ENSSMAG00000018138 SPOP (ENSSMAG00000018162) ENSSMAG00000018179 ENSSMAG00000018182 ##22 ENSSMAG00000031044 ngfrb (ENSSMAG00000018320) slc4a1b (ENSSMAG00000018349) atxn7l3b (ENSSMAG00000027131) ENSSMAG00000018391 psmc5 (ENSSMAG00000018497) ENSSMAG00000018408 ENSSMAG00000018520 ENSSMAG00000018674 znf281b (ENSSMAG00000018695) ENSSMAG00000018713 ENSSMAG00000026421 ENSSMAG00000018723 nmt1b (ENSSMAG00000018876) ENSSMAG00000018901 Ovalentaria ANCESTRAL SPECIES 13 ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00940000159427 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00940000156038.a.b.b.j ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000182154 ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 4 pth3r (ENSKMAG00000021140) rundc3ab (ENSKMAG00000021114) ENSKMAG00000021098 ndufa4b (ENSKMAG00000021090) ENSKMAG00000021077 ENSKMAG00000021068 SPOP (ENSKMAG00000021057) NXPH3 (ENSKMAG00000021048) ENSKMAG00000021044 ENSKMAG00000021031 ENSKMAG00000021018 ENSKMAG00000021005 ENSKMAG00000020995 ENSKMAG00000020976 ENSKMAG00000020959 ENSKMAG00000020942 ##22 ENSKMAG00000020868 ##22 ngfrb (ENSKMAG00000020839) slc4a1b (ENSKMAG00000020820) atxn7l3b (ENSKMAG00000020805) SMARCD2 (ENSKMAG00000020744) psmc5 (ENSKMAG00000020701) MPP3 (ENSKMAG00000020675) ENSKMAG00000020568 muc13b (ENSKMAG00000020498) znf281b (ENSKMAG00000020451) ENSKMAG00000020441 ENSKMAG00000020378 nmt1b (ENSKMAG00000020342) ENSKMAG00000020317 pcdh15b (ENSKMAG00000019732) Mangrove rivulus MODERN SPECIES 4 rundc3ab (ENSKMAG00000021114) ENSKMAG00000021098 ndufa4b (ENSKMAG00000021090) ENSKMAG00000021077 ENSKMAG00000021068 SPOP (ENSKMAG00000021057) NXPH3 (ENSKMAG00000021048) ENSKMAG00000021044 ENSKMAG00000021031 ENSKMAG00000021018 ENSKMAG00000021005 ENSKMAG00000020995 ENSKMAG00000020976 ENSKMAG00000020959 ENSKMAG00000020942 ##22 ENSKMAG00000020868 ##22 ngfrb (ENSKMAG00000020839) slc4a1b (ENSKMAG00000020820) atxn7l3b (ENSKMAG00000020805) SMARCD2 (ENSKMAG00000020744) psmc5 (ENSKMAG00000020701) MPP3 (ENSKMAG00000020675) ENSKMAG00000020568 muc13b (ENSKMAG00000020498) znf281b (ENSKMAG00000020451) ENSKMAG00000020441 ENSKMAG00000020378 nmt1b (ENSKMAG00000020342) ENSKMAG00000020317 pcdh15b (ENSKMAG00000019732) plce1 (ENSKMAG00000019311) Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.j ENSGT00940000157790.sb.a ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000169450.a ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e NAME_4 ANCESTRAL SPECIES 50 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000169450.a ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Mummichog MODERN SPECIES 1269 ENSFHEG00000012089 ENSFHEG00000012150 ##22 ENSFHEG00000012161 ENSFHEG00000012224 Sheepshead minnow MODERN SPECIES 227 ENSCVAG00000020263 ENSCVAG00000020277 ENSCVAG00000020295 ENSCVAG00000020305 ENSCVAG00000020319 ##22 ngfrb (ENSCVAG00000020334) slc4a1b (ENSCVAG00000020623) ENSCVAG00000020644 ENSCVAG00000020654 atxn7l3b (ENSCVAG00000020691) SMARCD2 (ENSCVAG00000020725) psmc5 (ENSCVAG00000020760) MPP3 (ENSCVAG00000020842) ENSCVAG00000021308 ENSCVAG00000021613 ENSCVAG00000021622 ENSCVAG00000021630 znf281b (ENSCVAG00000021642) ENSCVAG00000021649 ENSCVAG00000021733 Poeciliinae ANCESTRAL SPECIES 10 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000169450.a ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Poecilia DUPLICATION Poecilia ANCESTRAL SPECIES 22 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00940000173105 ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.cb.a ##22 ENSGT00940000164679.n.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.n.b ENSGT00950000183155.a.a.a.a.b.cb.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00940000164679.n.a.a ENSGT00950000183155.a.a.a.a.b.bb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.c ENSGT01030000235331 ENSGT00710000106813.B.b.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e NAME_6 ANCESTRAL SPECIES 399 ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.n.a.a ENSGT00950000183155.a.a.a.a.b.bb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b Amazon molly MODERN SPECIES 804 ENSPFOG00000006231 ##22 ENSPFOG00000023324 ##22 ngfrb (ENSPFOG00000006117) slc4a1b (ENSPFOG00000005768) ENSPFOG00000024620 atxn7l3b (ENSPFOG00000005733) Sailfin molly MODERN SPECIES 2452 ENSPLAG00000013099 SPOP (ENSPLAG00000013086) NXPH3 (ENSPLAG00000013067) NXPH3 (ENSPLAG00000013050) ENSPLAG00000013034 ENSPLAG00000012991 ##22 ENSPLAG00000012801 ENSPLAG00000012776 ##22 Guppy MODERN SPECIES 449 ENSPREG00000023058 mylpfb (ENSPREG00000023055) pgap3 (ENSPREG00000023052) ENSPREG00000023050 erbb2 (ENSPREG00000023046) ENSPREG00000023044 TACO1 (ENSPREG00000023042) pth3r (ENSPREG00000023040) RUNDC3A (ENSPREG00000023032) FAM117A (ENSPREG00000023026) SPOP (ENSPREG00000023022) NXPH3 (ENSPREG00000023016) ENSPREG00000023014 ##22 ENSPREG00000023010 ENSPREG00000023006 ENSPREG00000023001 ##22 ENSPREG00000022999 ENSPREG00000022996 ENSPREG00000022994 ENSPREG00000022992 ENSPREG00000022988 ENSPREG00000022987 ngfrb (ENSPREG00000022984) slc4a1b (ENSPREG00000022975) ENSPREG00000022971 atxn7l3b (ENSPREG00000022969) SMARCD2 (ENSPREG00000022958) psmc5 (ENSPREG00000022942) MPP3 (ENSPREG00000022926) ENSPREG00000022911 ENSPREG00000022907 Poecilia DUPLICATION Poecilia ANCESTRAL SPECIES 22 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000157790.sb.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00940000173105 ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.cb.a ##22 ENSGT00940000164679.n.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.n.b ENSGT00950000183155.a.a.a.a.b.cb.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00940000164679.n.a.a ENSGT00950000183155.a.a.a.a.b.bb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.c Guppy MODERN SPECIES 449 ENSPREG00000023066 ELOB (ENSPREG00000023062) ENSPREG00000023060 ENSPREG00000023058 mylpfb (ENSPREG00000023055) pgap3 (ENSPREG00000023052) ENSPREG00000023050 erbb2 (ENSPREG00000023046) ENSPREG00000023044 TACO1 (ENSPREG00000023042) pth3r (ENSPREG00000023040) RUNDC3A (ENSPREG00000023032) FAM117A (ENSPREG00000023026) SPOP (ENSPREG00000023022) NXPH3 (ENSPREG00000023016) ENSPREG00000023014 ##22 ENSPREG00000023010 ENSPREG00000023006 ENSPREG00000023001 ##22 ENSPREG00000022999 ENSPREG00000022996 ENSPREG00000022994 ENSPREG00000022992 ENSPREG00000022988 ENSPREG00000022987 ngfrb (ENSPREG00000022984) slc4a1b (ENSPREG00000022975) ENSPREG00000022971 atxn7l3b (ENSPREG00000022969) SMARCD2 (ENSPREG00000022958) psmc5 (ENSPREG00000022942) NAME_6 ANCESTRAL SPECIES 599 ENSGT00950000183155.a.a.a.a.b.cb.a ##22 ENSGT00940000164679.n.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 Amazon molly MODERN SPECIES 1464 ENSPFOG00000022697 ##22 Sailfin molly MODERN SPECIES 2202 ENSPLAG00000006931 ##22 ENSPLAG00000006968 ENSPLAG00000006980 ##22 ENSPLAG00000006987 ngfrb (ENSPLAG00000007046) slc4a1b (ENSPLAG00000007109) ENSPLAG00000007127 atxn7l3b (ENSPLAG00000007145) Poecilia ANCESTRAL SPECIES 22 ENSGT00940000157790.sb.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00940000173105 ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.cb.a ##22 ENSGT00940000164679.n.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00940000164679.n.b ENSGT00950000183155.a.a.a.a.b.cb.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00940000164679.n.a.a ENSGT00950000183155.a.a.a.a.b.bb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450.b ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.c ENSGT01030000235331 ENSGT00710000106813.B.b.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e NAME_6 ANCESTRAL SPECIES 602 ENSGT00940000164679.n.b ENSGT00950000183155.a.a.a.a.b.cb.b ##22 ENSGT00940000156038.a.b.b.j Amazon molly MODERN SPECIES 804 ENSPFOG00000006231 ##22 ENSPFOG00000023324 ##22 ngfrb (ENSPFOG00000006117) slc4a1b (ENSPFOG00000005768) ENSPFOG00000024620 atxn7l3b (ENSPFOG00000005733) Sailfin molly MODERN SPECIES 3211 ENSPLAG00000008272 ##22 ENSPLAG00000008295 ENSPLAG00000008348 ENSPLAG00000008362 Platyfish DUPLICATION Platyfish MODERN SPECIES 1 mylpfb (ENSXMAG00000021883) pgap3 (ENSXMAG00000026396) erbb2 (ENSXMAG00000018390) ENSXMAG00000018383 TACO1 (ENSXMAG00000029575) pth3r (ENSXMAG00000025154) rundc3ab (ENSXMAG00000018332) ENSXMAG00000018330 ndufa4b (ENSXMAG00000018329) ENSXMAG00000029816 SPOP (ENSXMAG00000018312) ENSXMAG00000024772 ENSXMAG00000028846 ENSXMAG00000028139 ##22 ENSXMAG00000029419 ENSXMAG00000026541 ##22 ENSXMAG00000023801 ngfrb (ENSXMAG00000017049) slc4a1b (ENSXMAG00000017002) ENSXMAG00000016991 ENSXMAG00000024453 atxn7l3b (ENSXMAG00000016988) SMARCD2 (ENSXMAG00000016961) psmc5 (ENSXMAG00000016945) MPP3 (ENSXMAG00000016920) ENSXMAG00000016794 ENSXMAG00000025262 ENSXMAG00000023743 muc13b (ENSXMAG00000007777) znf281b (ENSXMAG00000026693) ENSXMAG00000007792 Platyfish MODERN SPECIES 1 pkmyt1 (ENSXMAG00000018446) ENSXMAG00000024731 mylpfb (ENSXMAG00000021883) pgap3 (ENSXMAG00000026396) erbb2 (ENSXMAG00000018390) ENSXMAG00000018383 TACO1 (ENSXMAG00000029575) pth3r (ENSXMAG00000025154) rundc3ab (ENSXMAG00000018332) ENSXMAG00000018330 ndufa4b (ENSXMAG00000018329) ENSXMAG00000029816 SPOP (ENSXMAG00000018312) ENSXMAG00000024772 ENSXMAG00000028846 ENSXMAG00000028139 ##22 ENSXMAG00000029419 ENSXMAG00000026541 ##22 ENSXMAG00000023801 ngfrb (ENSXMAG00000017049) slc4a1b (ENSXMAG00000017002) ENSXMAG00000016991 ENSXMAG00000024453 atxn7l3b (ENSXMAG00000016988) SMARCD2 (ENSXMAG00000016961) psmc5 (ENSXMAG00000016945) MPP3 (ENSXMAG00000016920) ENSXMAG00000016794 ENSXMAG00000025262 ENSXMAG00000023743 muc13b (ENSXMAG00000007777) Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES 11 ENSGT00940000159427 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.r.a.a ENSGT00950000183155.a.a.a.a.b.fb ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Oryzias_a DUPLICATION Oryzias_a DUPLICATION Oryzias_a ANCESTRAL SPECIES 209 ENSGT00940000164679.r.a.a ENSGT00950000183155.a.a.a.a.b.fb.a.a ##22 Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 10 ENSORLG00000026709 dnmbp (ENSORLG00000026377) cpn1 (ENSORLG00000004715) ENSORLG00000004690 ENSORLG00000004669 ENSORLG00000004638 becn1 (ENSORLG00000004597) ENSORLG00000004585 ENSORLG00000004571 VAT1 (ENSORLG00000004547) ENSORLG00000004521 ENSORLG00000004518 ENSORLG00000005547 ##22 ENSORLG00000004494 ENSORLG00000025375 ENSORLG00000004509 ##22 ENSORLG00000023574 ENSORLG00000004481 P3H4 (ENSORLG00000013692) fkbp10b (ENSORLG00000013733) NT5C3B (ENSORLG00000013773) KLHL11 (ENSORLG00000013787) aclya (ENSORLG00000013878) DNAJC7 (ENSORLG00000013921) ENSORLG00000029969 ENSORLG00000004471 ghdc (ENSORLG00000004457) ENSORLG00000004451 GPAM (ENSORLG00000004440) ENSORLG00000030545 top2a (ENSORLG00000004407) Japanese Medaka HdrR MODERN SPECIES 10 ENSORLG00000004451 ghdc (ENSORLG00000004457) ENSORLG00000004471 ENSORLG00000029969 DNAJC7 (ENSORLG00000013921) aclya (ENSORLG00000013878) KLHL11 (ENSORLG00000013787) NT5C3B (ENSORLG00000013773) fkbp10b (ENSORLG00000013733) P3H4 (ENSORLG00000013692) ENSORLG00000004481 ENSORLG00000023574 ENSORLG00000004509 ##22 ENSORLG00000025375 ENSORLG00000004494 ENSORLG00000005547 ##22 ENSORLG00000004518 ENSORLG00000004521 VAT1 (ENSORLG00000004547) ENSORLG00000004571 ENSORLG00000004585 becn1 (ENSORLG00000004597) ENSORLG00000004638 ENSORLG00000004669 ENSORLG00000004690 cpn1 (ENSORLG00000004715) dnmbp (ENSORLG00000026377) ENSORLG00000026709 casp7 (ENSORLG00000004764) plekhs1.3 (ENSORLG00000027852) ENSORLG00000026812 Oryzias_a ANCESTRAL SPECIES 17 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.fb.b ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.fb.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Chinese medaka MODERN SPECIES 1022 NHLRC2 (ENSOSIG00000003154) dclre1a (ENSOSIG00000003988) ENSOSIG00000004067 casp7 (ENSOSIG00000004076) dnmbp (ENSOSIG00000004123) cpn1 (ENSOSIG00000004235) itgb3b (ENSOSIG00000005392) ENSOSIG00000009270 ENSOSIG00000009287 becn1 (ENSOSIG00000011019) ENSOSIG00000011044 ENSOSIG00000011046 VAT1 (ENSOSIG00000011055) GJC1 (ENSOSIG00000011064) ENSOSIG00000011068 ENSOSIG00000011071 ##22 ENSOSIG00000011074 ADAM11 (ENSOSIG00000011082) P3H4 (ENSOSIG00000011149) fkbp10b (ENSOSIG00000011151) NT5C3B (ENSOSIG00000011495) klhl11 (ENSOSIG00000011496) aclya (ENSOSIG00000011502) ENSOSIG00000011559 ENSOSIG00000013199 ENSOSIG00000013204 ghdc (ENSOSIG00000013210) ENSOSIG00000013216 GPAM (ENSOSIG00000013231) ENSOSIG00000014797 tut1 (ENSOSIG00000014813) Japanese Medaka HdrR MODERN SPECIES 10 pgap3 (ENSORLG00000005720) erbb2 (ENSORLG00000005702) ENSORLG00000005659 TACO1 (ENSORLG00000005652) pth3r (ENSORLG00000005645) rundc3ab (ENSORLG00000005637) ENSORLG00000005608 ndufa4b (ENSORLG00000025082) ENSORLG00000005597 SPOP (ENSORLG00000005591) ENSORLG00000005557 ENSORLG00000005533 ##22 ENSORLG00000024647 ENSORLG00000022165 ENSORLG00000030359 ENSORLG00000022011 ##22 ENSORLG00000028292 ngfrb (ENSORLG00000027270) slc4a1b (ENSORLG00000005495) ENSORLG00000005485 atxn7l3b (ENSORLG00000005478) SMARCD2 (ENSORLG00000005467) psmc5 (ENSORLG00000005441) ENSORLG00000005415 ENSORLG00000028181 ENSORLG00000005381 ENSORLG00000022519 ENSORLG00000024805 muc13b (ENSORLG00000026223) znf281b (ENSORLG00000005292) ENSORLG00000005281 Oryzias_a ANCESTRAL SPECIES 17 ENSGT00390000018316.a.e ENSGT00940000159427 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.fb.b ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.fb.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e Japanese Medaka HdrR MODERN SPECIES 10 TGFB1I1 (ENSORLG00000005775) ELOB (ENSORLG00000030015) pkmyt1 (ENSORLG00000005741) ENSORLG00000005738 pgap3 (ENSORLG00000005720) erbb2 (ENSORLG00000005702) ENSORLG00000005659 TACO1 (ENSORLG00000005652) pth3r (ENSORLG00000005645) rundc3ab (ENSORLG00000005637) ENSORLG00000005608 ndufa4b (ENSORLG00000025082) ENSORLG00000005597 SPOP (ENSORLG00000005591) ENSORLG00000005557 ENSORLG00000005533 ##22 ENSORLG00000024647 ENSORLG00000022165 ENSORLG00000030359 ENSORLG00000022011 ##22 ENSORLG00000028292 ngfrb (ENSORLG00000027270) slc4a1b (ENSORLG00000005495) ENSORLG00000005485 atxn7l3b (ENSORLG00000005478) SMARCD2 (ENSORLG00000005467) psmc5 (ENSORLG00000005441) ENSORLG00000005415 ENSORLG00000028181 ENSORLG00000005381 ENSORLG00000022519 Oryzias_b ANCESTRAL SPECIES 9 ENSGT00390000018316.a.e ENSGT00940000159427 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.fb ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 Indian medaka DUPLICATION Indian medaka MODERN SPECIES 17 pkmyt1 (ENSOMEG00000021762) ENSOMEG00000021769 ENSOMEG00000021785 mylpfb (ENSOMEG00000021803) pgap3 (ENSOMEG00000021848) erbb2 (ENSOMEG00000021935) ENSOMEG00000021954 TACO1 (ENSOMEG00000021984) pth3r (ENSOMEG00000022022) rundc3ab (ENSOMEG00000022064) ENSOMEG00000022080 ndufa4b (ENSOMEG00000022090) ENSOMEG00000022139 SPOP (ENSOMEG00000022194) ENSOMEG00000022203 ENSOMEG00000022350 ##22 ENSOMEG00000022399 ENSOMEG00000022439 ENSOMEG00000022458 ##22 ENSOMEG00000022469 ##22 ENSOMEG00000022482 ##22 ENSOMEG00000022584 ##22 ngfrb (ENSOMEG00000022613) slc4a1b (ENSOMEG00000000599) ENSOMEG00000022642 atxn7l3b (ENSOMEG00000022658) SMARCD2 (ENSOMEG00000022684) psmc5 (ENSOMEG00000022697) MPP3 (ENSOMEG00000022763) ENSOMEG00000022831 ENSOMEG00000022869 Indian medaka MODERN SPECIES 117 ENSOMEG00000008565 ENSOMEG00000008646 ##22 ENSOMEG00000008679 ENSOMEG00000008696 ENSOMEG00000008711 Javanese ricefish DUPLICATION Javanese ricefish MODERN SPECIES 10 pgap3 (ENSOJAG00000023525) erbb2 (ENSOJAG00000022944) kcnh2a (ENSOJAG00000022755) TACO1 (ENSOJAG00000022744) pth3r (ENSOJAG00000022691) rundc3ab (ENSOJAG00000022673) ENSOJAG00000022666 ndufa4b (ENSOJAG00000022664) ENSOJAG00000022662 SPOP (ENSOJAG00000022636) ENSOJAG00000022634 ENSOJAG00000022630 ENSOJAG00000022623 ##22 ENSOJAG00000022610 ENSOJAG00000022602 ENSOJAG00000022581 ##22 ENSOJAG00000022529 ##22 ENSOJAG00000022507 ENSOJAG00000022499 ##22 ngfrb (ENSOJAG00000022492) slc4a1b (ENSOJAG00000022453) ENSOJAG00000022442 atxn7l3b (ENSOJAG00000022437) SMARCD2 (ENSOJAG00000022347) psmc5 (ENSOJAG00000022250) MPP3 (ENSOJAG00000021715) muc13b (ENSOJAG00000020486) ENSOJAG00000020460 znf281b (ENSOJAG00000020409) ENSOJAG00000020386 ENSOJAG00000020073 Javanese ricefish MODERN SPECIES 10 erbb2 (ENSOJAG00000022944) kcnh2a (ENSOJAG00000022755) TACO1 (ENSOJAG00000022744) pth3r (ENSOJAG00000022691) rundc3ab (ENSOJAG00000022673) ENSOJAG00000022666 ndufa4b (ENSOJAG00000022664) ENSOJAG00000022662 SPOP (ENSOJAG00000022636) ENSOJAG00000022634 ENSOJAG00000022630 ENSOJAG00000022623 ##22 ENSOJAG00000022610 ENSOJAG00000022602 ENSOJAG00000022581 ##22 ENSOJAG00000022529 ##22 ENSOJAG00000022507 ENSOJAG00000022499 ##22 ngfrb (ENSOJAG00000022492) slc4a1b (ENSOJAG00000022453) ENSOJAG00000022442 atxn7l3b (ENSOJAG00000022437) SMARCD2 (ENSOJAG00000022347) psmc5 (ENSOJAG00000022250) MPP3 (ENSOJAG00000021715) muc13b (ENSOJAG00000020486) ENSOJAG00000020460 znf281b (ENSOJAG00000020409) ENSOJAG00000020386 ENSOJAG00000020073 nmt1b (ENSOJAG00000020019) Oryzias ANCESTRAL SPECIES 11 ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.r.a.a ENSGT00950000183155.a.a.a.a.b.fb ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Oryzias_b ANCESTRAL SPECIES 9 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.fb ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Indian medaka DUPLICATION Indian medaka DUPLICATION Indian medaka DUPLICATION Indian medaka MODERN SPECIES 17 erbb2 (ENSOMEG00000021935) ENSOMEG00000021954 TACO1 (ENSOMEG00000021984) pth3r (ENSOMEG00000022022) rundc3ab (ENSOMEG00000022064) ENSOMEG00000022080 ndufa4b (ENSOMEG00000022090) ENSOMEG00000022139 SPOP (ENSOMEG00000022194) ENSOMEG00000022203 ENSOMEG00000022350 ##22 ENSOMEG00000022399 ENSOMEG00000022439 ENSOMEG00000022458 ##22 ENSOMEG00000022469 ##22 ENSOMEG00000022482 ##22 ENSOMEG00000022584 ##22 ngfrb (ENSOMEG00000022613) slc4a1b (ENSOMEG00000000599) ENSOMEG00000022642 atxn7l3b (ENSOMEG00000022658) SMARCD2 (ENSOMEG00000022684) psmc5 (ENSOMEG00000022697) MPP3 (ENSOMEG00000022763) ENSOMEG00000022831 ENSOMEG00000022869 ENSOMEG00000022872 znf281b (ENSOMEG00000022879) ENSOMEG00000022891 ENSOMEG00000022936 nmt1b (ENSOMEG00000022945) Indian medaka MODERN SPECIES 17 pgap3 (ENSOMEG00000021848) erbb2 (ENSOMEG00000021935) ENSOMEG00000021954 TACO1 (ENSOMEG00000021984) pth3r (ENSOMEG00000022022) rundc3ab (ENSOMEG00000022064) ENSOMEG00000022080 ndufa4b (ENSOMEG00000022090) ENSOMEG00000022139 SPOP (ENSOMEG00000022194) ENSOMEG00000022203 ENSOMEG00000022350 ##22 ENSOMEG00000022399 ENSOMEG00000022439 ENSOMEG00000022458 ##22 ENSOMEG00000022469 ##22 ENSOMEG00000022482 ##22 ENSOMEG00000022584 ##22 ngfrb (ENSOMEG00000022613) slc4a1b (ENSOMEG00000000599) ENSOMEG00000022642 atxn7l3b (ENSOMEG00000022658) SMARCD2 (ENSOMEG00000022684) psmc5 (ENSOMEG00000022697) MPP3 (ENSOMEG00000022763) ENSOMEG00000022831 ENSOMEG00000022869 ENSOMEG00000022872 znf281b (ENSOMEG00000022879) ENSOMEG00000022891 ENSOMEG00000022936 Indian medaka MODERN SPECIES 17 mylpfb (ENSOMEG00000021803) pgap3 (ENSOMEG00000021848) erbb2 (ENSOMEG00000021935) ENSOMEG00000021954 TACO1 (ENSOMEG00000021984) pth3r (ENSOMEG00000022022) rundc3ab (ENSOMEG00000022064) ENSOMEG00000022080 ndufa4b (ENSOMEG00000022090) ENSOMEG00000022139 SPOP (ENSOMEG00000022194) ENSOMEG00000022203 ENSOMEG00000022350 ##22 ENSOMEG00000022399 ENSOMEG00000022439 ENSOMEG00000022458 ##22 ENSOMEG00000022469 ##22 ENSOMEG00000022482 ##22 ENSOMEG00000022584 ##22 ngfrb (ENSOMEG00000022613) slc4a1b (ENSOMEG00000000599) ENSOMEG00000022642 atxn7l3b (ENSOMEG00000022658) SMARCD2 (ENSOMEG00000022684) psmc5 (ENSOMEG00000022697) MPP3 (ENSOMEG00000022763) ENSOMEG00000022831 ENSOMEG00000022869 ENSOMEG00000022872 znf281b (ENSOMEG00000022879) ENSOMEG00000022891 Indian medaka MODERN SPECIES 17 ENSOMEG00000021954 TACO1 (ENSOMEG00000021984) pth3r (ENSOMEG00000022022) rundc3ab (ENSOMEG00000022064) ENSOMEG00000022080 ndufa4b (ENSOMEG00000022090) ENSOMEG00000022139 SPOP (ENSOMEG00000022194) ENSOMEG00000022203 ENSOMEG00000022350 ##22 ENSOMEG00000022399 ENSOMEG00000022439 ENSOMEG00000022458 ##22 ENSOMEG00000022469 ##22 ENSOMEG00000022482 ##22 ENSOMEG00000022584 ##22 ngfrb (ENSOMEG00000022613) slc4a1b (ENSOMEG00000000599) ENSOMEG00000022642 atxn7l3b (ENSOMEG00000022658) SMARCD2 (ENSOMEG00000022684) psmc5 (ENSOMEG00000022697) MPP3 (ENSOMEG00000022763) ENSOMEG00000022831 ENSOMEG00000022869 ENSOMEG00000022872 znf281b (ENSOMEG00000022879) ENSOMEG00000022891 ENSOMEG00000022936 nmt1b (ENSOMEG00000022945) ENSOMEG00000022952 Javanese ricefish MODERN SPECIES 10 TACO1 (ENSOJAG00000022744) pth3r (ENSOJAG00000022691) rundc3ab (ENSOJAG00000022673) ENSOJAG00000022666 ndufa4b (ENSOJAG00000022664) ENSOJAG00000022662 SPOP (ENSOJAG00000022636) ENSOJAG00000022634 ENSOJAG00000022630 ENSOJAG00000022623 ##22 ENSOJAG00000022610 ENSOJAG00000022602 ENSOJAG00000022581 ##22 ENSOJAG00000022529 ##22 ENSOJAG00000022507 ENSOJAG00000022499 ##22 ngfrb (ENSOJAG00000022492) slc4a1b (ENSOJAG00000022453) ENSOJAG00000022442 atxn7l3b (ENSOJAG00000022437) SMARCD2 (ENSOJAG00000022347) psmc5 (ENSOJAG00000022250) MPP3 (ENSOJAG00000021715) muc13b (ENSOJAG00000020486) ENSOJAG00000020460 znf281b (ENSOJAG00000020409) ENSOJAG00000020386 ENSOJAG00000020073 nmt1b (ENSOJAG00000020019) ENSOJAG00000020005 pcdh15b (ENSOJAG00000016947) Oryzias_a ANCESTRAL SPECIES 17 ENSGT00390000001304 ENSGT00940000158232 ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b.fb.b ##22 ENSGT00940000164679.r.a.b.a ENSGT00950000183155.a.a.a.a.b.fb.a.b ##22 ENSGT00940000156038.a.b.b.j ENSGT00950000183155.a.a.a.a.b.gb ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT01030000235331 ENSGT00710000106813.B.b.e ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Chinese medaka MODERN SPECIES 297 ENSOSIG00000006162 ##22 ENSOSIG00000006163 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000164512.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Pomacentridae ANCESTRAL SPECIES 13 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Pomacentridae_A ANCESTRAL SPECIES 11 ENSGT00940000155158.q.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00940000177899 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000169450 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Amphiprion ANCESTRAL SPECIES 28 ENSGT00940000155158.q.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 10 RHOG (ENSAPEG00000011455) ENSAPEG00000011559 mylpfb (ENSAPEG00000011641) pgap3 (ENSAPEG00000012807) erbb2 (ENSAPEG00000012879) dcaf7 (ENSAPEG00000012985) ENSAPEG00000013007 TACO1 (ENSAPEG00000013022) pth3r (ENSAPEG00000013042) rundc3ab (ENSAPEG00000013139) ENSAPEG00000013151 ndufa4b (ENSAPEG00000013164) ENSAPEG00000013182 SPOP (ENSAPEG00000013194) NXPH3 (ENSAPEG00000013244) ENSAPEG00000013248 ##22 ENSAPEG00000013269 ENSAPEG00000013294 ##22 QRFPR (ENSAPEG00000013309) polr3a (ENSAPEG00000013351) ZMIZ1 (ENSAPEG00000013474) PPIF (ENSAPEG00000013551) ZCCHC24 (ENSAPEG00000013587) ENSAPEG00000013594 DLG5 (ENSAPEG00000013628) KCNMA1 (ENSAPEG00000013824) ZNF503 (ENSAPEG00000014033) COMTD1 (ENSAPEG00000014051) VDAC2 (ENSAPEG00000014070) SAMD8 (ENSAPEG00000014108) ENSAPEG00000014151 Orange clownfish MODERN SPECIES 10 mylpfb (ENSAPEG00000011641) pgap3 (ENSAPEG00000012807) erbb2 (ENSAPEG00000012879) dcaf7 (ENSAPEG00000012985) ENSAPEG00000013007 TACO1 (ENSAPEG00000013022) pth3r (ENSAPEG00000013042) rundc3ab (ENSAPEG00000013139) ENSAPEG00000013151 ndufa4b (ENSAPEG00000013164) ENSAPEG00000013182 SPOP (ENSAPEG00000013194) NXPH3 (ENSAPEG00000013244) ENSAPEG00000013248 ##22 ENSAPEG00000013269 ENSAPEG00000013294 ##22 QRFPR (ENSAPEG00000013309) polr3a (ENSAPEG00000013351) ZMIZ1 (ENSAPEG00000013474) PPIF (ENSAPEG00000013551) ZCCHC24 (ENSAPEG00000013587) ENSAPEG00000013594 DLG5 (ENSAPEG00000013628) KCNMA1 (ENSAPEG00000013824) ZNF503 (ENSAPEG00000014033) COMTD1 (ENSAPEG00000014051) VDAC2 (ENSAPEG00000014070) SAMD8 (ENSAPEG00000014108) ENSAPEG00000014151 ENSAPEG00000014301 DUSP13 (ENSAPEG00000014308) Clown anemonefish MODERN SPECIES 1665 ENSAOCG00000005624 mylpfb (ENSAOCG00000005637) pgap3 (ENSAOCG00000005663) erbb2 (ENSAOCG00000005685) dcaf7 (ENSAOCG00000005728) KCNH2 (ENSAOCG00000006042) TACO1 (ENSAOCG00000006109) pth3r (ENSAOCG00000006126) rundc3ab (ENSAOCG00000002346) ENSAOCG00000002203 ndufa4b (ENSAOCG00000006205) ENSAOCG00000006230 SPOP (ENSAOCG00000006266) NXPH3 (ENSAOCG00000000297) ENSAOCG00000006427 ##22 tmigd1 (ENSAOCG00000006460) ENSAOCG00000006480 cct8 (ENSAOCG00000006551) ENSAOCG00000006575 aldocb (ENSAOCG00000006588) pigs (ENSAOCG00000000331) srsf1b (ENSAOCG00000000337) dynll2b (ENSAOCG00000000341) ENSAOCG00000006775 heatr6 (ENSAOCG00000006882) ddx52 (ENSAOCG00000000356) zgc:163073 (ENSAOCG00000006928) ENSAOCG00000006945 rogdi (ENSAOCG00000000361) glyr1 (ENSAOCG00000007032) Spiny chromis MODERN SPECIES 402 mylpfb (ENSAPOG00000022794) pgap3 (ENSAPOG00000000649) erbb2 (ENSAPOG00000022725) dcaf7 (ENSAPOG00000022618) ENSAPOG00000022597 TACO1 (ENSAPOG00000022562) pth3r (ENSAPOG00000022539) rundc3ab (ENSAPOG00000022350) ENSAPOG00000022310 ndufa4b (ENSAPOG00000022293) ENSAPOG00000000633 SPOP (ENSAPOG00000022249) NXPH3 (ENSAPOG00000022238) ENSAPOG00000022229 ENSAPOG00000022210 ENSAPOG00000022201 ##22 ngfrb (ENSAPOG00000022183) slc4a1b (ENSAPOG00000022140) ENSAPOG00000021727 atxn7l3b (ENSAPOG00000021683) SMARCD2 (ENSAPOG00000021653) psmc5 (ENSAPOG00000021593) Bicolor damselfish MODERN SPECIES 556 ENSSPAG00000015102 cfap20 (ENSSPAG00000015090) dgat1a (ENSSPAG00000015022) zgc:63863 (ENSSPAG00000014986) pgap3 (ENSSPAG00000014967) erbb2 (ENSSPAG00000014915) ENSSPAG00000014887 TACO1 (ENSSPAG00000014875) pth3r (ENSSPAG00000014705) rundc3ab (ENSSPAG00000014585) ENSSPAG00000014555 ndufa4b (ENSSPAG00000014529) ENSSPAG00000014509 SPOP (ENSSPAG00000014477) NXPH3 (ENSSPAG00000014470) ENSSPAG00000014404 ##22 ngfrb (ENSSPAG00000014389) slc4a1b (ENSSPAG00000013930) ENSSPAG00000013674 atxn7l3b (ENSSPAG00000013652) SMARCD2 (ENSSPAG00000013616) psmc5 (ENSSPAG00000013577) ENSSPAG00000013524 Cichlidae ANCESTRAL SPECIES 15 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00940000164679 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT01030000235331 ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 71 pgap3 (ENSACIG00000014254) erbb2 (ENSACIG00000014118) dcaf7 (ENSACIG00000014092) KCNH2 (ENSACIG00000014075) TACO1 (ENSACIG00000014052) pth3r (ENSACIG00000014009) rundc3ab (ENSACIG00000013902) ENSACIG00000013882 ndufa4b (ENSACIG00000013800) ENSACIG00000013788 SPOP (ENSACIG00000013766) ENSACIG00000013753 ENSACIG00000013745 ##22 ENSACIG00000013730 ##22 ENSACIG00000013714 ENSACIG00000013697 ##22 ngfrb (ENSACIG00000013690) slc4a1b (ENSACIG00000013654) atxn7l3b (ENSACIG00000013637) SMARCD2 (ENSACIG00000013435) psmc5 (ENSACIG00000013393) MPP3 (ENSACIG00000013248) ENSACIG00000013220 ENSACIG00000013206 ENSACIG00000012762 ENSACIG00000012730 znf281b (ENSACIG00000012710) ENSACIG00000012704 ENSACIG00000012693 ENSACIG00000012625 nmt1b (ENSACIG00000012445) Midas cichlid MODERN SPECIES 71 ENSACIG00000014292 ENSACIG00000014280 pgap3 (ENSACIG00000014254) erbb2 (ENSACIG00000014118) dcaf7 (ENSACIG00000014092) KCNH2 (ENSACIG00000014075) TACO1 (ENSACIG00000014052) pth3r (ENSACIG00000014009) rundc3ab (ENSACIG00000013902) ENSACIG00000013882 ndufa4b (ENSACIG00000013800) ENSACIG00000013788 SPOP (ENSACIG00000013766) ENSACIG00000013753 ENSACIG00000013745 ##22 ENSACIG00000013730 ##22 ENSACIG00000013714 ENSACIG00000013697 ##22 ngfrb (ENSACIG00000013690) slc4a1b (ENSACIG00000013654) atxn7l3b (ENSACIG00000013637) SMARCD2 (ENSACIG00000013435) psmc5 (ENSACIG00000013393) MPP3 (ENSACIG00000013248) ENSACIG00000013220 ENSACIG00000013206 ENSACIG00000012762 ENSACIG00000012730 znf281b (ENSACIG00000012710) ENSACIG00000012704 ENSACIG00000012693 Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Haplochromini ANCESTRAL SPECIES 17 ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841.e.b ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Haplochromini_A ANCESTRAL SPECIES 245 ENSGT00940000164679.s.a ENSGT00950000183155.a.a.a.a.b.lb ##22 Haplochromini_B DUPLICATION Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841.e.b ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT00530000064692.B.a.a.b.a.c.b.c.a ENSGT00950000183155.a.a.a.a.b.lb.a.a ##22 ENSGT00940000164679.s.a ENSGT00950000183155.a.a.a.a.b.lb.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.g ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Eastern happy MODERN SPECIES 15 mylpfb (ENSACLG00000010379) pgap3 (ENSACLG00000010390) erbb2 (ENSACLG00000010392) dcaf7 (ENSACLG00000010462) ENSACLG00000010527 TACO1 (ENSACLG00000010544) pth3r (ENSACLG00000010562) rundc3ab (ENSACLG00000010574) ENSACLG00000010599 ndufa4b (ENSACLG00000010626) ENSACLG00000010638 SPOP (ENSACLG00000010661) ENSACLG00000010676 ENSACLG00000010778 ##22 ENSACLG00000011265 ENSACLG00000011366 ##22 ENSACLG00000011416 ngfrb (ENSACLG00000011419) slc4a1b (ENSACLG00000011432) ENSACLG00000011456 atxn7l3b (ENSACLG00000011477) SMARCD2 (ENSACLG00000011493) psmc5 (ENSACLG00000011499) MPP3 (ENSACLG00000011529) ENSACLG00000011619 ENSACLG00000011627 ENSACLG00000011646 ENSACLG00000011669 ENSACLG00000011680 ENSACLG00000011695 ENSACLG00000011707 Zebra mbuna MODERN SPECIES 434 ENSMZEG00005014581 ENSMZEG00005014568 ENSMZEG00005014526 ##22 ENSMZEG00005014506 ##22 ENSMZEG00005014491 ##22 Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841.e.b ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT00530000064692.B.a.a.b.a.c.b.c.a ENSGT00950000183155.a.a.a.a.b.lb.a.a ##22 ENSGT00940000164679.s.a ENSGT00950000183155.a.a.a.a.b.lb.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.g ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 434 ENSMZEG00005014581 ENSMZEG00005014568 ENSMZEG00005014526 ##22 ENSMZEG00005014506 ##22 ENSMZEG00005014491 ##22 Zebra mbuna MODERN SPECIES 1111 erbb2 (ENSMZEG00005014420) dcaf7 (ENSMZEG00005014452) ENSMZEG00005014465 TACO1 (ENSMZEG00005014480) pth3r (ENSMZEG00005014515) rundc3ab (ENSMZEG00005014584) FAM117A (ENSMZEG00005014647) ENSMZEG00005014654 SPOP (ENSMZEG00005014681) NXPH3 (ENSMZEG00005014690) ENSMZEG00005014693 ENSMZEG00005014702 ##22 ENSMZEG00005014720 ENSMZEG00005014730 ##22 ENSMZEG00005014744 ENSMZEG00005014769 ##22 ENSMZEG00005014797 SPOP (ENSMZEG00005014808) ENSMZEG00005014828 ndufa4b (ENSMZEG00005014842) ENSMZEG00005014848 ENSMZEG00005014858 rundc3ab (ENSMZEG00005014869) pth3r (ENSMZEG00005014890) ngfrb (ENSMZEG00005014900) slc4a1b (ENSMZEG00005014912) ENSMZEG00005014921 atxn7l3b (ENSMZEG00005014933) SMARCD2 (ENSMZEG00005014945) psmc5 (ENSMZEG00005014956) MPP3 (ENSMZEG00005014985) Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b.lb.b ##22 Zebra mbuna MODERN SPECIES 434 ENSMZEG00005014581 ENSMZEG00005014568 ENSMZEG00005014526 ##22 ENSMZEG00005014506 ##22 ENSMZEG00005014491 ##22 Nile tilapia MODERN SPECIES 20 mylpfb (ENSONIG00000011532) pgap3 (ENSONIG00000011535) erbb2 (ENSONIG00000011537) dcaf7 (ENSONIG00000011567) ENSONIG00000011568 TACO1 (ENSONIG00000011570) pth3r (ENSONIG00000011572) rundc3ab (ENSONIG00000011581) ENSONIG00000011585 ndufa4b (ENSONIG00000031058) ENSONIG00000011586 SPOP (ENSONIG00000011587) ENSONIG00000011590 ENSONIG00000027714 ##22 ENSONIG00000038239 ENSONIG00000016477 ##22 ENSONIG00000028852 ngfrb (ENSONIG00000031781) slc4a1b (ENSONIG00000016469) ENSONIG00000016468 atxn7l3b (ENSONIG00000036417) SMARCD2 (ENSONIG00000016465) psmc5 (ENSONIG00000035978) MPP3 (ENSONIG00000016460) ENSONIG00000016455 ENSONIG00000042113 ENSONIG00000030966 ENSONIG00000028559 ENSONIG00000033433 znf281b (ENSONIG00000038628) ENSONIG00000029372 Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.a.b ##22 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Haplochromini ANCESTRAL SPECIES 17 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841.e.b ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00950000183155.a.a.a.a.b.lb ##22 ENSGT00940000164679.s ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e Haplochromini_A ANCESTRAL SPECIES 16 ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841.e.b ENSGT00940000164841.e.a ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT01030000236274 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e ENSGT00940000166361 ENSGT00390000017837.a.w ENSGT00510000047925.e ENSGT00940000156675.d ENSGT00940000157356 Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000159846.a.a.d ENSGT00390000012820 ENSGT00940000164841.e.b ENSGT00940000158922.c ENSGT00950000183046.a.b.k.d ENSGT00940000154268.k.b ENSGT00390000003044 ENSGT00940000154376.a.b ENSGT00950000182883.a.a.b ENSGT00940000164679.t ENSGT00950000183155.a.a.a.a.b.mb ##22 ENSGT00530000064692.B.a.a.b.a.c.b.c.a ENSGT00950000183155.a.a.a.a.b.lb.a.a ##22 ENSGT00940000164679.s.a ENSGT00950000183155.a.a.a.a.b.lb.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158253 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b.g ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1111 ENSMZEG00005014375 ENSMZEG00005014387 mylpfb (ENSMZEG00005014394) pgap3 (ENSMZEG00005014404) erbb2 (ENSMZEG00005014420) dcaf7 (ENSMZEG00005014452) ENSMZEG00005014465 TACO1 (ENSMZEG00005014480) pth3r (ENSMZEG00005014515) rundc3ab (ENSMZEG00005014584) FAM117A (ENSMZEG00005014647) ENSMZEG00005014654 SPOP (ENSMZEG00005014681) NXPH3 (ENSMZEG00005014690) ENSMZEG00005014693 ENSMZEG00005014702 ##22 ENSMZEG00005014720 ENSMZEG00005014730 ##22 ENSMZEG00005014744 ENSMZEG00005014769 ##22 ENSMZEG00005014797 SPOP (ENSMZEG00005014808) ENSMZEG00005014828 ndufa4b (ENSMZEG00005014842) ENSMZEG00005014848 ENSMZEG00005014858 rundc3ab (ENSMZEG00005014869) pth3r (ENSMZEG00005014890) ngfrb (ENSMZEG00005014900) slc4a1b (ENSMZEG00005014912) ENSMZEG00005014921 Zebra mbuna MODERN SPECIES 1111 mylpfb (ENSMZEG00005014394) pgap3 (ENSMZEG00005014404) erbb2 (ENSMZEG00005014420) dcaf7 (ENSMZEG00005014452) ENSMZEG00005014465 TACO1 (ENSMZEG00005014480) pth3r (ENSMZEG00005014515) rundc3ab (ENSMZEG00005014584) FAM117A (ENSMZEG00005014647) ENSMZEG00005014654 SPOP (ENSMZEG00005014681) NXPH3 (ENSMZEG00005014690) ENSMZEG00005014693 ENSMZEG00005014702 ##22 ENSMZEG00005014720 ENSMZEG00005014730 ##22 ENSMZEG00005014744 ENSMZEG00005014769 ##22 ENSMZEG00005014797 SPOP (ENSMZEG00005014808) ENSMZEG00005014828 ndufa4b (ENSMZEG00005014842) ENSMZEG00005014848 ENSMZEG00005014858 rundc3ab (ENSMZEG00005014869) pth3r (ENSMZEG00005014890) ngfrb (ENSMZEG00005014900) slc4a1b (ENSMZEG00005014912) ENSMZEG00005014921 atxn7l3b (ENSMZEG00005014933) SMARCD2 (ENSMZEG00005014945) Eastern happy MODERN SPECIES 15 ENSACLG00000010360 ENSACLG00000010373 mylpfb (ENSACLG00000010379) pgap3 (ENSACLG00000010390) erbb2 (ENSACLG00000010392) dcaf7 (ENSACLG00000010462) ENSACLG00000010527 TACO1 (ENSACLG00000010544) pth3r (ENSACLG00000010562) rundc3ab (ENSACLG00000010574) ENSACLG00000010599 ndufa4b (ENSACLG00000010626) ENSACLG00000010638 SPOP (ENSACLG00000010661) ENSACLG00000010676 ENSACLG00000010778 ##22 ENSACLG00000011265 ENSACLG00000011366 ##22 ENSACLG00000011416 ngfrb (ENSACLG00000011419) slc4a1b (ENSACLG00000011432) ENSACLG00000011456 atxn7l3b (ENSACLG00000011477) SMARCD2 (ENSACLG00000011493) psmc5 (ENSACLG00000011499) MPP3 (ENSACLG00000011529) ENSACLG00000011619 ENSACLG00000011627 ENSACLG00000011646 ENSACLG00000011669 ENSACLG00000011680 Lyretail cichlid MODERN SPECIES 436 ENSNBRG00000011566 ENSNBRG00000011548 mylpfb (ENSNBRG00000011528) pgap3 (ENSNBRG00000011491) erbb2 (ENSNBRG00000011460) ENSNBRG00000011139 TACO1 (ENSNBRG00000011026) pth3r (ENSNBRG00000010880) rundc3ab (ENSNBRG00000010786) ENSNBRG00000010761 ndufa4b (ENSNBRG00000010686) ENSNBRG00000010666 SPOP (ENSNBRG00000010651) ENSNBRG00000010634 ENSNBRG00000010597 ##22 ENSNBRG00000010570 ##22 Protacanthopterygii ANCESTRAL SPECIES 69 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154268.k.b ENSGT00940000154376.a.b ENSGT00940000164679 ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000158654 ENSGT01020000230346.F ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d ENSGT01080000257365.b.a.a.b.b.e.d ENSGT00940000166361 ENSGT00940000164099.b ENSGT00390000017837.a.w ENSGT00940000156993.c ENSGT00940000160739 Northern pike MODERN SPECIES 4 ENSELUG00000000991 ENSELUG00000023405 mylpfb (ENSELUG00000023430) pgap3 (ENSELUG00000023501) erbb2 (ENSELUG00000023565) dcaf7 (ENSELUG00000023589) ENSELUG00000023610 ENSELUG00000023623 ENSELUG00000023640 pth3r (ENSELUG00000023655) rundc3ab (ENSELUG00000001556) ENSELUG00000023781 ndufa4b (ENSELUG00000001001) SPOP (ENSELUG00000023946) ENSELUG00000028413 ENSELUG00000024005 ##22 ngfrb (ENSELUG00000024059) slc4a1b (ENSELUG00000001882) ENSELUG00000001839 ATXN7L3 (ENSELUG00000032089) SMARCD2 (ENSELUG00000001803) psmc5 (ENSELUG00000001785) MPP3 (ENSELUG00000004710) ENSELUG00000004836 muc13b (ENSELUG00000028180) znf281b (ENSELUG00000004876) ENSELUG00000004891 ENSELUG00000005007 ENSELUG00000005065 nmt1b (ENSELUG00000005116) PLCD3 (ENSELUG00000005165) Salmoninae ANCESTRAL SPECIES 9 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a.c ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154376.a.b ENSGT00940000164679.e ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000165754.h ENSGT00940000158654 ENSGT01020000230346.F.ab ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d.c ENSGT01080000257365.b.a.a.b.b.e.d ENSGT00940000166361 ENSGT00940000164099.b ENSGT00390000017837.a.w ENSGT00940000156993.c ENSGT00940000160739 Huchen DUPLICATION Huchen MODERN SPECIES 72 nudcd1 (ENSHHUG00000035833) ENSHHUG00000035817 ZFPM2 (ENSHHUG00000035802) lrp12 (ENSHHUG00000035791) ENSHHUG00000035761 ENSHHUG00000035756 ndufv1 (ENSHHUG00000035750) ENSHHUG00000035747 ##22 ENSHHUG00000035740 ##22 ENSHHUG00000035738 ENSHHUG00000035729 ENSHHUG00000035726 znf687b (ENSHHUG00000035721) PSMD4 (ENSHHUG00000035707) ubap2l (ENSHHUG00000035629) ENSHHUG00000035616 ENSHHUG00000035601 pygo2 (ENSHHUG00000035595) s100s (ENSHHUG00000035583) ENSHHUG00000035580 s100u (ENSHHUG00000035567) ENSHHUG00000035572 cks1b (ENSHHUG00000035565) Huchen MODERN SPECIES 4531 ENSHHUG00000038140 ENSHHUG00000038112 ENSHHUG00000038144 ##22 Salmoninae_a ANCESTRAL SPECIES 17 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a.c ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154376.a.b ENSGT00940000164679.e ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000165754.h ENSGT00940000158654 ENSGT01020000230346.F.ab ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d.c ENSGT01080000257365.b.a.a.b.b.e.d ENSGT00940000166361 ENSGT00940000164099.b ENSGT00390000017837.a.w ENSGT00940000156993.c ENSGT00940000160739 Oncorhynchus ANCESTRAL SPECIES 26 ENSGT01100000263491.a.a.c.a ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a.c ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820.h ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154376.a.b ENSGT00940000164679.e ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000167603 ENSGT00940000166349.j ENSGT00940000158253.`d ENSGT00940000158654 ENSGT01020000230346.F.ab ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d.c ENSGT01080000257365.b.a.a.b.b.e.d ENSGT00940000166361.e ENSGT00940000164099.b ENSGT00390000017837.a.w Oncorhynchus_a ANCESTRAL SPECIES 84 ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000164923.a.a ENSGT00940000159038.a.a.c ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000165921.h ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820.h ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154376.a.b ENSGT00940000164679.e ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT01090000260051.b.a.a.b.b.g ENSGT00940000156033.e.c ENSGT00940000159449.d ENSGT00390000000411.gb ENSGT00940000155245.k ENSGT00940000158288.j ENSGT00940000155447.c ENSGT00500000044926.h ENSGT00940000163322.a.b.b ENSGT00500000044903.a ENSGT00950000182850.a.a.b.e.a.b ENSGT00940000165556.a.a.b ENSGT00950000182850.a.a.b.e.b.a ENSGT00950000182937.A.a.p Coho salmon DUPLICATION Coho salmon MODERN SPECIES 12 ENSOKIG00005021352 ENSOKIG00005021360 ENSOKIG00005021380 MYL11 (ENSOKIG00005021391) pgap3 (ENSOKIG00005021507) erbb2 (ENSOKIG00005021858) DCAF7 (ENSOKIG00005028141) ENSOKIG00005028153 MTARC2 (ENSOKIG00005028161) TACO1 (ENSOKIG00005028168) pth3r (ENSOKIG00005028178) RUNDC3A (ENSOKIG00005028288) ENSOKIG00005028378 SPOP (ENSOKIG00005028389) ENSOKIG00005028416 ENSOKIG00005028442 ##22 ENSOKIG00005028468 ##22 NGFR (ENSOKIG00005028472) rgra (ENSOKIG00005028481) LRIT1 (ENSOKIG00005028499) SLC18A3 (ENSOKIG00005028511) EIF3L (ENSOKIG00005028538) cdh23 (ENSOKIG00005028730) ENSOKIG00005029525 PLPP4 (ENSOKIG00005029539) fgfr2 (ENSOKIG00005029633) ENSOKIG00005031471 ENSOKIG00005031501 ALDH18A1 (ENSOKIG00005031518) ABLIM1 (ENSOKIG00005031716) ENSOKIG00005031835 Coho salmon MODERN SPECIES 12 ENSOKIG00005021360 ENSOKIG00005021380 MYL11 (ENSOKIG00005021391) pgap3 (ENSOKIG00005021507) erbb2 (ENSOKIG00005021858) DCAF7 (ENSOKIG00005028141) ENSOKIG00005028153 MTARC2 (ENSOKIG00005028161) TACO1 (ENSOKIG00005028168) pth3r (ENSOKIG00005028178) RUNDC3A (ENSOKIG00005028288) ENSOKIG00005028378 SPOP (ENSOKIG00005028389) ENSOKIG00005028416 ENSOKIG00005028442 ##22 ENSOKIG00005028468 ##22 NGFR (ENSOKIG00005028472) rgra (ENSOKIG00005028481) LRIT1 (ENSOKIG00005028499) SLC18A3 (ENSOKIG00005028511) EIF3L (ENSOKIG00005028538) cdh23 (ENSOKIG00005028730) ENSOKIG00005029525 PLPP4 (ENSOKIG00005029539) fgfr2 (ENSOKIG00005029633) ENSOKIG00005031471 ENSOKIG00005031501 ALDH18A1 (ENSOKIG00005031518) ABLIM1 (ENSOKIG00005031716) ENSOKIG00005031835 CHUK (ENSOKIG00005031877) Chinook salmon MODERN SPECIES 16 ENSOTSG00005006078 ENSOTSG00005006079 mylpfb (ENSOTSG00005006080) pgap3 (ENSOTSG00005006082) erbb2 (ENSOTSG00005006108) dcaf7 (ENSOTSG00005014955) ENSOTSG00005014956 MTARC2 (ENSOTSG00005014959) TACO1 (ENSOTSG00005014961) pth3r (ENSOTSG00005014968) RUNDC3A (ENSOTSG00005014973) ENSOTSG00005014974 ENSOTSG00005014976 SPOP (ENSOTSG00005014979) ENSOTSG00005015050 ENSOTSG00005015053 ##22 ngfrb (ENSOTSG00005015055) rgra (ENSOTSG00005015056) lrit1a (ENSOTSG00005015057) slc18a3a (ENSOTSG00005015058) eif3s6ip (ENSOTSG00005015060) cdh23 (ENSOTSG00005015142) PLPP4 (ENSOTSG00005017564) fgfr2 (ENSOTSG00005017789) ENSOTSG00005037203 ALDH18A1 (ENSOTSG00005037204) ENSOTSG00005037210 ENSOTSG00005037211 ablim1a (ENSOTSG00005037212) ENSOTSG00005037704 Rainbow trout MODERN SPECIES 7 ENSOMYG00000044693 ENSOMYG00000044690 ENSOMYG00000044679 pgap3 (ENSOMYG00000044668) erbb2 (ENSOMYG00000042476) ENSOMYG00000035817 ENSOMYG00000042260 ENSOMYG00000042250 ENSOMYG00000042246 ENSOMYG00000042233 pth3r (ENSOMYG00000042214) ENSOMYG00000042170 fam117ab (ENSOMYG00000042147) SPOP (ENSOMYG00000042141) ENSOMYG00000067242 ENSOMYG00000042072 ##22 ENSOMYG00000068810 ngfrb (ENSOMYG00000042041) slc4a1b (ENSOMYG00000041788) ENSOMYG00000041742 ENSOMYG00000055533 ENSOMYG00000049376 ENSOMYG00000041455 atxn7l3b (ENSOMYG00000041739) ENSOMYG00000041292 ENSOMYG00000041277 ENSOMYG00000039889 ENSOMYG00000038808 znf281b (ENSOMYG00000038791) ENSOMYG00000038778 ENSOMYG00000037274 Salmo ANCESTRAL SPECIES 3 ENSGT00940000159427 ENSGT00940000162179.e.b.b.b ENSGT01100000263491.a.b.a.a.a.b.b.a ENSGT00940000159038.a.a.c ENSGT00390000001304 ENSGT00940000158232 ENSGT00390000006939.i.a ENSGT00940000157790 ENSGT00940000159665.p ENSGT00390000012820 ENSGT00940000164841 ENSGT00940000158922.c ENSGT00950000183046.a.b.k ENSGT00940000154376.a.b ENSGT00940000164679.e ENSGT00950000183155.a.a.a.a.b ##22 ENSGT00730000110974.b ENSGT00940000157423.a.b ENSGT00940000165754.h ENSGT00940000158253.bd ENSGT00940000158654 ENSGT01020000230346.F.ab ENSGT00940000157190.d ENSGT00940000165769 ENSGT00710000106813.B.b ENSGT00940000161586.d.c ENSGT01080000257365.b.a.a.b.b.e.d ENSGT00940000166361 ENSGT00940000164099.b ENSGT00390000017837.a.w ENSGT00940000156993.c River trout MODERN SPECIES 22 hsc70 (ENSSTUG00000010179) ##31 ctrl (ENSSTUG00000010129) ENSSTUG00000010121 lin37 (ENSSTUG00000010075) hspb6 (ENSSTUG00000010066) psenen (ENSSTUG00000010045) ENSSTUG00000009922 ENSSTUG00000009915 ENSSTUG00000009902 ENSSTUG00000009885 APLP1 (ENSSTUG00000009789) ST14 (ENSSTUG00000009348) kirrel3l (ENSSTUG00000009246) nphs1 (ENSSTUG00000009168) ENSSTUG00000009151 ENSSTUG00000009143 ##22 ENSSTUG00000009115 ENSSTUG00000009102 ENSSTUG00000009087 ENSSTUG00000009065 ENSSTUG00000009056 ENSSTUG00000009037 ENSSTUG00000009024 hpn (ENSSTUG00000008940) fxyd11 (ENSSTUG00000008919) ENSSTUG00000008906 ATP4A (ENSSTUG00000008706) gapdhs (ENSSTUG00000008472) tmem147 (ENSSTUG00000008455) ENSSTUG00000008444 ENSSTUG00000008414 Atlantic salmon MODERN SPECIES 10 ENSSSAG00000073574 ENSSSAG00000084033 erbb2 (ENSSSAG00000072899) ENSSSAG00000072847 dcaf7 (ENSSSAG00000072844) ENSSSAG00000072841 ENSSSAG00000072837 ENSSSAG00000072835 ENSSSAG00000107109 ENSSSAG00000072821 ENSSSAG00000093577 ENSSSAG00000072663 ENSSSAG00000089354 SPOP (ENSSSAG00000072649) ENSSSAG00000120523 ENSSSAG00000072644 ##22 ngfrb (ENSSSAG00000088913) slc4a1b (ENSSSAG00000072213) ENSSSAG00000085663 atxn7l3b (ENSSSAG00000072157) smarcd2 (ENSSSAG00000071260) psmc5 (ENSSSAG00000069965) ENSSSAG00000069914 ENSSSAG00000069196 ENSSSAG00000107015 ENSSSAG00000069082 znf281b (ENSSSAG00000118314) ENSSSAG00000098903 ENSSSAG00000113284 ENSSSAG00000068775 ENSSSAG00000109408 Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Asian bonytongue MODERN SPECIES 12 erbb2 (ENSSFOG00015013756) dcaf7 (ENSSFOG00015032214) ENSSFOG00015013817 gfap (ENSSFOG00015013855) MAP3K3 (ENSSFOG00015013876) TACO1 (ENSSFOG00015013916) limd2 (ENSSFOG00015016642) pth3r (ENSSFOG00015013985) ddx42 (ENSSFOG00015014064) rundc3ab (ENSSFOG00015014128) ENSSFOG00015014184 ndufa4b (ENSSFOG00015027987) spop (ENSSFOG00015014233) ENSSFOG00015014253 ENSSFOG00015027842 ENSSFOG00015023195 ##22 ENSSFOG00015033179 ENSSFOG00015032144 NGFR (ENSSFOG00015021410) selenow2a (ENSSFOG00015028894) KLHL10 (ENSSFOG00015021431) KLHL10 (ENSSFOG00015021446) slc4a1b (ENSSFOG00015021462) ubtf (ENSSFOG00015021525) ATXN7L3 (ENSSFOG00015030337) ENSSFOG00015021588 adprh (ENSSFOG00015030953) ENSSFOG00015033045 DOC2A (ENSSFOG00015021629) ENSSFOG00015021661 ENSSFOG00015021669 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 1191 ENSPKIG00000015240 ##22 ENSPKIG00000015232 ##22 ENSPKIG00000015220 P. kingsleyae MODERN SPECIES 1191 ENSPKIG00000015240 ##22 ENSPKIG00000015232 ##22 ENSPKIG00000015220 Elephant shark MODERN SPECIES 2131 ENSCMIG00000012122 ##22 ENSCMIG00000012144 ENSCMIG00000012145 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183155.a.a.a.a.b ##22 Hagfish MODERN SPECIES 324 ENSEBUG00000011516 ENSEBUG00000004128 ENSEBUG00000016934 ENSEBUG00000007095 ENSEBUG00000010514 ENSEBUG00000012482 ENSEBUG00000003211 ENSEBUG00000014095 ##22 ENSEBUG00000015811 ENSEBUG00000014197 ENSEBUG00000008949 ENSEBUG00000007951 Lamprey MODERN SPECIES 225 ENSPMAG00000002967 ENSPMAG00000002969 ##22 ENSPMAG00000002988 naa50 (ENSPMAG00000003009) SSNA1 (ENSPMAG00000003017) ENSPMAG00000003019 ENSPMAG00000003028 ENSPMAG00000003040 ENSPMAG00000003053 ENSPMAG00000003062 zc4h2 (ENSPMAG00000003067) PAFAH2 (ENSPMAG00000003076) Vertebrata ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Hagfish MODERN SPECIES 34 ENSEBUG00000010464 ENSEBUG00000009174 ENSEBUG00000012693 ENSEBUG00000007959 gart (ENSEBUG00000002082) ENSEBUG00000012664 ENSEBUG00000010272 ENSEBUG00000013506 SLC35D3 (ENSEBUG00000010430) pex7 (ENSEBUG00000001661) DYNLT1 (ENSEBUG00000017067) ENSEBUG00000015779 ENSEBUG00000016157 ENSEBUG00000002844 ENSEBUG00000012485 #8 ENSEBUG00000007636 ##22 ENSEBUG00000007669 ENSEBUG00000000756 ppp2r1ba (ENSEBUG00000002361) u2af1 (ENSEBUG00000002608) ENSEBUG00000008478 #24 ENSEBUG00000005275 ENSEBUG00000003351 ENSEBUG00000001834 ENSEBUG00000015422 ENSEBUG00000009392 ENSEBUG00000002435 ENSEBUG00000015567 ENSEBUG00000014783 ENSEBUG00000007390 ENSEBUG00000003624 Gnathostomata ANCESTRAL SPECIES 1737 ENSGT00950000183155.a.a.b ##22 ENSGT00940000156850.a.b Elephant shark MODERN SPECIES 2176 ENSCMIG00000014518 ##22 ENSCMIG00000014510 tfr2 (ENSCMIG00000014497) Euteleostomi ANCESTRAL SPECIES 1426 ENSGT00950000183155.a.a.b ##22 ENSGT00940000156850.a.b Sarcopterygii ANCESTRAL SPECIES 1207 ENSGT00950000183155.a.a.b ##22 ENSGT00940000156850.a.b Tetrapoda ANCESTRAL SPECIES 627 ENSGT00950000183155.a.a.b ##22 ENSGT00940000156850.a.b Anura ANCESTRAL SPECIES 502 ENSGT00950000183155.a.a.b ##22 ENSGT00940000156850.a.b ENSGT00940000159448.c.b.a.a.b Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000008946 ENSLLEG00000008913 GMNC (ENSLLEG00000008845) OSTN (ENSLLEG00000025240) UTS2B (ENSLLEG00000025199) CCDC50 (ENSLLEG00000025087) ENSLLEG00000025053 FGF12 (ENSLLEG00000024908) ENSLLEG00000024884 ENSLLEG00000024858 ENSLLEG00000024802 ENSLLEG00000024789 ENSLLEG00000024425 ENSLLEG00000024385 ENSLLEG00000024369 ENSLLEG00000023064 ##22 ENSLLEG00000022948 ENSLLEG00000022731 ENSLLEG00000022616 ENSLLEG00000022345 ENSLLEG00000022304 PLAAT1 (ENSLLEG00000022258) ENSLLEG00000021916 ENSLLEG00000021876 ENSLLEG00000020900 ENSLLEG00000020790 ENSLLEG00000020587 ENSLLEG00000020556 ENSLLEG00000019719 ENSLLEG00000019135 OPA1 (ENSLLEG00000012077) Actinopterygii ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Salmo ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 River trout MODERN SPECIES 30 dyrk1b (ENSSTUG00000019285) fbl (ENSSTUG00000019276) kcnj21 (ENSSTUG00000019265) ppox (ENSSTUG00000019140) ENSSTUG00000019124 upk1a (ENSSTUG00000019113) ENSSTUG00000019099 ENSSTUG00000019062 rbm42 (ENSSTUG00000019049) ENSSTUG00000019028 ENSSTUG00000019016 ENSSTUG00000019010 ENSSTUG00000019001 ENSSTUG00000018994 ENSSTUG00000018760 ##22 ENSSTUG00000018737 ##22 ENSSTUG00000018707 ##22 ENSSTUG00000018635 ENSSTUG00000018610 sult2st3 (ENSSTUG00000018586) tmem147 (ENSSTUG00000018567) gapdhs (ENSSTUG00000018446) ATP4A (ENSSTUG00000017972) ENSSTUG00000017951 ENSSTUG00000017943 hpn (ENSSTUG00000017917) ENSSTUG00000017905 ENSSTUG00000017899 ENSSTUG00000017893 ENSSTUG00000017889 ENSSTUG00000017880 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Chinook salmon MODERN SPECIES 1 ubxn7 (ENSOTSG00005040227) eif4g1a (ENSOTSG00005040231) fam131aa (ENSOTSG00005040266) CLCN2 (ENSOTSG00005040271) ENSOTSG00005040433 ENSOTSG00005040435 per2 (ENSOTSG00005040438) hes6 (ENSOTSG00005040443) itm2cb (ENSOTSG00005040445) lpar5a (ENSOTSG00005040446) GPR55 (ENSOTSG00005040447) ENSOTSG00005040449 ENSOTSG00005040451 EPHB1 (ENSOTSG00005040457) ENSOTSG00005040464 ENSOTSG00005040468 ##22 ENSOTSG00005040469 pax3a (ENSOTSG00005040473) acsl3b (ENSOTSG00005040489) ENSOTSG00005041007 ITGB1 (ENSOTSG00005041024) NRP1 (ENSOTSG00005044636) pard3ab (ENSOTSG00005044642) ENSOTSG00005044699 KLF6 (ENSOTSG00005044711) pitrm1 (ENSOTSG00005044716) PFKP (ENSOTSG00005044734) ADARB2 (ENSOTSG00005044930) wdr37 (ENSOTSG00005044936) gtpbp4 (ENSOTSG00005045006) LARP4B (ENSOTSG00005045008) Otomorpha ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Characiphysae ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Electric eel MODERN SPECIES 1257 ENSEEEG00000005365 ENSEEEG00000005364 ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00950000183155.a.a.b ##22 Atlantic herring MODERN SPECIES 23 ENSCHAG00000000207 prnprs3 (ENSCHAG00000000228) prnprs3 (ENSCHAG00000000238) bmp2k (ENSCHAG00000000264) paqr3a (ENSCHAG00000000357) antxr2a (ENSCHAG00000000414) prdm8b (ENSCHAG00000000468) fgf5 (ENSCHAG00000000579) cfap299 (ENSCHAG00000000633) bmp3 (ENSCHAG00000000661) prkg2 (ENSCHAG00000000891) rasgef1ba (ENSCHAG00000001283) ENSCHAG00000001450 ENSCHAG00000001527 ENSCHAG00000001551 ENSCHAG00000001565 ##22 ascc2 (ENSCHAG00000001620) RNF215 (ENSCHAG00000001960) sec14l8 (ENSCHAG00000001998) CNNM4 (ENSCHAG00000002457) ckap2l (ENSCHAG00000002580) PURB (ENSCHAG00000002614) H2AZ2 (ENSCHAG00000002660) hs3st1l2 (ENSCHAG00000002838) ENSCHAG00000002882 camk2b1 (ENSCHAG00000002953) si:dkey-174n20.1 (ENSCHAG00000004253) SUSD2 (ENSCHAG00000004311) ZNRF3 (ENSCHAG00000004891) coq5 (ENSCHAG00000004902) kremen1 (ENSCHAG00000004917)