Sarcopterygii	ANCESTRAL SPECIES	247						ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00730000110920.a #28	ENSGT00940000160984 #29
Tetrapoda	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093
Amniota	ANCESTRAL SPECIES		ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Mammalia	ANCESTRAL SPECIES	7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Theria	ANCESTRAL SPECIES	15	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Eutheria	ANCESTRAL SPECIES	3	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00940000169601	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34
Primates	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Haplorrhini	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Simiiformes	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000162817	ENSGT01090000260123.a	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a #33	ENSGT00940000158413 #34
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000162817	ENSGT01090000260123.a	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.n #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Hominidae	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.n #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.n #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554.p #31	ENSGT00910000147490	ENSGT00390000009554.o ##31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.a #33	ENSGT00940000158413 #34
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.n #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554.p #31	ENSGT00910000147490	ENSGT00390000009554.o ##31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.a #33	ENSGT00940000158413 #34
Human	MODERN SPECIES	2	TENM4 (ENSG00000149256) #7	NARS2 (ENSG00000137513) #8	GAB2 (ENSG00000033327) #9	USP35 (ENSG00000118369) #10	KCTD21 (ENSG00000188997) #11	ALG8 (ENSG00000159063) #12	NDUFC2 (ENSG00000151366) #13	THRSP (ENSG00000151365) #14	NDUFC2-KCTD14 (ENSG00000259112) #15	KCTD14 (ENSG00000151364) #16	INTS4 (ENSG00000149262) #17	AAMDC (ENSG00000087884) #18	RSF1 (ENSG00000048649) #19	AQP11 (ENSG00000178301) #20	CLNS1A (ENSG00000074201) #21	PAK1 (ENSG00000149269) #22	GDPD4 (ENSG00000178795) #23	MYO7A (ENSG00000137474) #24	OMP (ENSG00000254550) #25	CAPN5 (ENSG00000149260) #26	B3GNT6 (ENSG00000198488) #27	ACER3 (ENSG00000078124) #28	TSKU (ENSG00000182704) #29	LRRC32 (ENSG00000137507) #30	EMSY (ENSG00000158636) #31	GVQW3 (ENSG00000179240) #32	THAP12 (ENSG00000137492) #33	WNT11 (ENSG00000085741) #34	UVRAG (ENSG00000198382) #35	DGAT2 (ENSG00000062282) #36	MOGAT2 (ENSG00000166391) #37
Pan	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.n #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554.p #31	ENSGT00910000147490	ENSGT00390000009554.o ##31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Bonobo	MODERN SPECIES	2	GAB2 (ENSPPAG00000029980) #9	USP35 (ENSPPAG00000038381) #10	ENSPPAG00000002837	KCTD21 (ENSPPAG00000000521) #11	ALG8 (ENSPPAG00000029627) #12	THRSP (ENSPPAG00000023087) #14	NDUFC2 (ENSPPAG00000039205) #13	KCTD14 (ENSPPAG00000042258) #16	ENSPPAG00000035381 #17	ENSPPAG00000026625 #17	ENSPPAG00000022805 #18	ENSPPAG00000043844	RSF1 (ENSPPAG00000020888) #19	CLNS1A (ENSPPAG00000035940) #21	AQP11 (ENSPPAG00000030812) #20	PAK1 (ENSPPAG00000042768) #22	ENSPPAG00000033073	GDPD4 (ENSPPAG00000033740) #23	MYO7A (ENSPPAG00000035116) #24	CAPN5 (ENSPPAG00000034162) #26	B3GNT6 (ENSPPAG00000004892) #27	ACER3 (ENSPPAG00000015516) #28	TSKU (ENSPPAG00000025259) #29	LRRC32 (ENSPPAG00000028327) #30	ENSPPAG00000027471 #31	THAP12 (ENSPPAG00000005479) #33	ENSPPAG00000028053 #32	ENSPPAG00000038460 ##31	ENSPPAG00000030327	WNT11 (ENSPPAG00000010959) #34	UVRAG (ENSPPAG00000027735) #35
Chimpanzee	MODERN SPECIES	2	TENM4 (ENSPTRG00000004118) #7	NARS2 (ENSPTRG00000004117) #8	GAB2 (ENSPTRG00000004115) #9	USP35 (ENSPTRG00000051443) #10	ENSPTRG00000046421	KCTD21 (ENSPTRG00000044559) #11	ALG8 (ENSPTRG00000004112) #12	THRSP (ENSPTRG00000004110) #14	NDUFC2 (ENSPTRG00000047123) #13	KCTD14 (ENSPTRG00000004109) #16	INTS4 (ENSPTRG00000004108) #17	AAMDC (ENSPTRG00000004106) #18	RSF1 (ENSPTRG00000004105) #19	CLNS1A (ENSPTRG00000048842) #21	AQP11 (ENSPTRG00000004103) #20	PAK1 (ENSPTRG00000004101) #22	ENSPTRG00000048327	GDPD4 (ENSPTRG00000004100) #23	MYO7A (ENSPTRG00000004098) #24	CAPN5 (ENSPTRG00000049993) #26	B3GNT6 (ENSPTRG00000023606) #27	ACER3 (ENSPTRG00000004096) #28	TSKU (ENSPTRG00000028468) #29	LRRC32 (ENSPTRG00000004094) #30	EMSY (ENSPTRG00000004093) #31	ENSPTRG00000049644	ENSPTRG00000028470 #32	THAP12 (ENSPTRG00000004091) #33	WNT11 (ENSPTRG00000004090) #34	UVRAG (ENSPTRG00000004088) #35	DGAT2 (ENSPTRG00000004087) #36
Gorilla	MODERN SPECIES	2	GAB2 (ENSGGOG00000010086) #9	USP35 (ENSGGOG00000010079) #10	ENSGGOG00000037208	KCTD21 (ENSGGOG00000010076) #11	ALG8 (ENSGGOG00000011611) #12	THRSP (ENSGGOG00000003652) #14	NDUFC2 (ENSGGOG00000041901) #13	KCTD14 (ENSGGOG00000013554) #16	ENSGGOG00000043528 #17	ENSGGOG00000001515 #17	ENSGGOG00000013088 #18	ENSGGOG00000023151	RSF1 (ENSGGOG00000001833) #19	CLNS1A (ENSGGOG00000003091) #21	AQP11 (ENSGGOG00000011985) #20	PAK1 (ENSGGOG00000003150) #22	ENSGGOG00000043330	ENSGGOG00000008102 #23	MYO7A (ENSGGOG00000008082) #24	CAPN5 (ENSGGOG00000008071) #26	B3GNT6 (ENSGGOG00000000016) #27	ACER3 (ENSGGOG00000003818) #28	TSKU (ENSGGOG00000008670) #29	LRRC32 (ENSGGOG00000001727) #30	EMSY (ENSGGOG00000012926) #31	GVQW3 (ENSGGOG00000027994) #32	THAP12 (ENSGGOG00000006152) #33	WNT11 (ENSGGOG00000015024) #34	UVRAG (ENSGGOG00000002911) #35	DGAT2 (ENSGGOG00000002910) #36	MAP6 (ENSGGOG00000005400)
Orangutan	MODERN SPECIES	2	NARS2 (ENSPPYG00000003725) #8	GAB2 (ENSPPYG00000003723) #9	USP35 (ENSPPYG00000003722) #10	ENSPPYG00000003721	KCTD21 (ENSPPYG00000003720) #11	ALG8 (ENSPPYG00000003719) #12	NDUFC2 (ENSPPYG00000036421) #13	THRSP (ENSPPYG00000003717) #14	KCTD14 (ENSPPYG00000003716) #16	INTS4 (ENSPPYG00000003715) #17	ENSPPYG00000003714 #18	RSF1 (ENSPPYG00000003713) #19	CLNS1A (ENSPPYG00000003712) #21	AQP11 (ENSPPYG00000003711) #20	ENSPPYG00000003709	PAK1 (ENSPPYG00000003708) #22	ENSPPYG00000035320	ENSPPYG00000003707 #23	MYO7A (ENSPPYG00000003706) #24	CAPN5 (ENSPPYG00000003705) #26	B3GNT6 (ENSPPYG00000003704) #27	ACER3 (ENSPPYG00000003703) #28	TSKU (ENSPPYG00000003702) #29	LRRC32 (ENSPPYG00000003700) #30	EMSY (ENSPPYG00000003699) #31	ENSPPYG00000003698 #32	THAP12 (ENSPPYG00000003697) #33	ENSPPYG00000040892	WNT11 (ENSPPYG00000003696) #34	UVRAG (ENSPPYG00000003695) #35	DGAT2 (ENSPPYG00000003694) #36
Gibbon	MODERN SPECIES	5	NARS2 (ENSNLEG00000016643) #8	ENSNLEG00000030860	GAB2 (ENSNLEG00000016667) #9	USP35 (ENSNLEG00000028871) #10	KCTD21 (ENSNLEG00000030708) #11	ENSNLEG00000030722	ALG8 (ENSNLEG00000027080) #12	ENSNLEG00000032308 #13	THRSP (ENSNLEG00000036237) #14	KCTD14 (ENSNLEG00000026663) #16	INTS4 (ENSNLEG00000026995) #17	ENSNLEG00000033096 #18	RSF1 (ENSNLEG00000016681) #19	CLNS1A (ENSNLEG00000016699) #21	AQP11 (ENSNLEG00000016709) #20	PAK1 (ENSNLEG00000016711) #22	ENSNLEG00000030724	GDPD4 (ENSNLEG00000016736) #23	MYO7A (ENSNLEG00000016747) #24	CAPN5 (ENSNLEG00000016775) #26	OMP (ENSNLEG00000016787) #25	B3GNT6 (ENSNLEG00000016789) #27	ACER3 (ENSNLEG00000034984) #28	TSKU (ENSNLEG00000033845) #29	LRRC32 (ENSNLEG00000016810) #30	EMSY (ENSNLEG00000016812) #31	ENSNLEG00000028651	ENSNLEG00000033823 #32	ENSNLEG00000032732 ##33	WNT11 (ENSNLEG00000016841) #34	UVRAG (ENSNLEG00000027301) #35
Cercopithecidae	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a #33	ENSGT00940000158413 #34
Rhinopithecus	ANCESTRAL SPECIES	63		ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.q.a #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727
Black snub-nosed monkey	MODERN SPECIES	1148		ENSRBIG00000043707	NARS2 (ENSRBIG00000040493) #8	GAB2 (ENSRBIG00000031806) #9	USP35 (ENSRBIG00000040631) #10	KCTD21 (ENSRBIG00000025743) #11	ALG8 (ENSRBIG00000035473) #12	NDUFC2 (ENSRBIG00000009625) #13	THRSP (ENSRBIG00000024986) #14	KCTD14 (ENSRBIG00000042721) #16	INTS4 (ENSRBIG00000042236) #17	AAMDC (ENSRBIG00000044663) #18	RSF1 (ENSRBIG00000043374) #19	ENSRBIG00000035450 #21	AQP11 (ENSRBIG00000013902) #20	PAK1 (ENSRBIG00000034335) #22	ENSRBIG00000036379	GDPD4 (ENSRBIG00000037924) #23	MYO7A (ENSRBIG00000036813) #24	CAPN5 (ENSRBIG00000041321) #26	B3GNT6 (ENSRBIG00000039681) #27	ENSRBIG00000036893	ENSRBIG00000018440	ACER3 (ENSRBIG00000037201) #28	TSKU (ENSRBIG00000019981) #29
Golden snub-nosed monkey	MODERN SPECIES	1247	NARS2 (ENSRROG00000044898) #8	ENSRROG00000029807	GAB2 (ENSRROG00000037838) #9	USP35 (ENSRROG00000015796) #10	KCTD21 (ENSRROG00000015553) #11	ALG8 (ENSRROG00000037352) #12	NDUFC2 (ENSRROG00000028423) #13	THRSP (ENSRROG00000011313) #14	ENSRROG00000003031	KCTD14 (ENSRROG00000030587) #16	INTS4 (ENSRROG00000033522) #17	AAMDC (ENSRROG00000038727) #18	RSF1 (ENSRROG00000041658) #19	ENSRROG00000044618 #21	AQP11 (ENSRROG00000044105) #20	PAK1 (ENSRROG00000045159) #22	ENSRROG00000036425	GDPD4 (ENSRROG00000023992) #23
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a #33	ENSGT00940000158413 #34
Vervet Monkey	MODERN SPECIES		FAM181B (ENSCSAG00000000614)	TENM4 (ENSCSAG00000003773) #7	NARS2 (ENSCSAG00000003793) #8	GAB2 (ENSCSAG00000003797) #9	USP35 (ENSCSAG00000003800) #10	KCTD21 (ENSCSAG00000000615) #11	ALG8 (ENSCSAG00000003802) #12	NDUFC2 (ENSCSAG00000003804) #13	THRSP (ENSCSAG00000000616) #14	KCTD14 (ENSCSAG00000003806) #16	INTS4 (ENSCSAG00000003811) #17	AAMDC (ENSCSAG00000003812) #18	RSF1 (ENSCSAG00000003816) #19	CLNS1A (ENSCSAG00000003818) #21	AQP11 (ENSCSAG00000003819) #20	PAK1 (ENSCSAG00000003823) #22	GDPD4 (ENSCSAG00000003828) #23	MYO7A (ENSCSAG00000003861) #24	CAPN5 (ENSCSAG00000003875) #26	B3GNT6 (ENSCSAG00000000617) #27	ACER3 (ENSCSAG00000003878) #28	TSKU (ENSCSAG00000000618) #29	LRRC32 (ENSCSAG00000003880) #30	EMSY (ENSCSAG00000003885) #31	THAP12 (ENSCSAG00000003894) #33	WNT11 (ENSCSAG00000003899) #34	UVRAG (ENSCSAG00000003902) #35	DGAT2 (ENSCSAG00000003904) #36	MOGAT2 (ENSCSAG00000003906) #37	MAP6 (ENSCSAG00000003908)	SERPINH1 (ENSCSAG00000003909)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.d #33	ENSGT00940000158413 #34
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.d #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT01030000234566.e.b.b.a #7	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.d #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Drill	MODERN SPECIES	1018	TENM4 (ENSMLEG00000034676) #7	ENSMLEG00000037365	NARS2 (ENSMLEG00000029559) #8	GAB2 (ENSMLEG00000038890) #9	USP35 (ENSMLEG00000038344) #10	KCTD21 (ENSMLEG00000019386) #11	ENSMLEG00000026673	ALG8 (ENSMLEG00000025271) #12	NDUFC2 (ENSMLEG00000039299) #13	KCTD14 (ENSMLEG00000030473) #16	INTS4 (ENSMLEG00000040512) #17	AAMDC (ENSMLEG00000040894) #18	RSF1 (ENSMLEG00000038363) #19	CLNS1A (ENSMLEG00000040581) #21	AQP11 (ENSMLEG00000028777) #20	PAK1 (ENSMLEG00000033376) #22	ENSMLEG00000039171	GDPD4 (ENSMLEG00000044208) #23	MYO7A (ENSMLEG00000000314) #24	CAPN5 (ENSMLEG00000043868) #26	ACER3 (ENSMLEG00000027480) #28
Sooty mangabey	MODERN SPECIES	545	ENSCATG00000045182	TENM4 (ENSCATG00000045269) #7	ENSCATG00000044075	NARS2 (ENSCATG00000031854) #8	GAB2 (ENSCATG00000034189) #9	USP35 (ENSCATG00000034027) #10	KCTD21 (ENSCATG00000007922) #11	ALG8 (ENSCATG00000044265) #12	NDUFC2 (ENSCATG00000039655) #13	KCTD14 (ENSCATG00000007749) #16	INTS4 (ENSCATG00000039621) #17	AAMDC (ENSCATG00000032345) #18	RSF1 (ENSCATG00000041020) #19	CLNS1A (ENSCATG00000043634) #21	AQP11 (ENSCATG00000012294) #20	PAK1 (ENSCATG00000032259) #22	ENSCATG00000032730	GDPD4 (ENSCATG00000038800) #23	MYO7A (ENSCATG00000037969) #24	CAPN5 (ENSCATG00000044156) #26	B3GNT6 (ENSCATG00000031669) #27	ACER3 (ENSCATG00000024996) #28	TSKU (ENSCATG00000018628) #29	LRRC32 (ENSCATG00000039757) #30	EMSY (ENSCATG00000033145) #31	ENSCATG00000006180	GVQW3 (ENSCATG00000035253) #32	THAP12 (ENSCATG00000024587) #33	WNT11 (ENSCATG00000035881) #34	UVRAG (ENSCATG00000039451) #35	DGAT2 (ENSCATG00000001407) #36
Olive baboon	MODERN SPECIES	3	ENSPANG00000011885	NARS2 (ENSPANG00000025887) #8	GAB2 (ENSPANG00000014350) #9	USP35 (ENSPANG00000006477) #10	KCTD21 (ENSPANG00000043382) #11	ENSPANG00000012861	ALG8 (ENSPANG00000014351) #12	NDUFC2 (ENSPANG00000004040) #13	THRSP (ENSPANG00000039953) #14	KCTD14 (ENSPANG00000032429) #16	INTS4 (ENSPANG00000016287) #17	AAMDC (ENSPANG00000016126) #18	RSF1 (ENSPANG00000017793) #19	CLNS1A (ENSPANG00000019127) #21	AQP11 (ENSPANG00000014352) #20	PAK1 (ENSPANG00000018291) #22	GDPD4 (ENSPANG00000011944) #23	MYO7A (ENSPANG00000008342) #24	CAPN5 (ENSPANG00000010115) #26	ENSPANG00000050104	B3GNT6 (ENSPANG00000006331) #27	ACER3 (ENSPANG00000024908) #28	ENSPANG00000046867	TSKU (ENSPANG00000018404) #29	ENSPANG00000049669	LRRC32 (ENSPANG00000015382) #30	EMSY (ENSPANG00000007638) #31	ENSPANG00000007883 #32	ENSPANG00000003101 #33	WNT11 (ENSPANG00000014353) #34	UVRAG (ENSPANG00000012471) #35
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00390000011698.c.a.c.b	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.d #33	ENSGT00940000158413 #34
Pig-tailed macaque	MODERN SPECIES	423	FAM181B (ENSMNEG00000003392)	TENM4 (ENSMNEG00000042610) #7	ENSMNEG00000033890	NARS2 (ENSMNEG00000036144) #8	GAB2 (ENSMNEG00000040872) #9	USP35 (ENSMNEG00000040956) #10	KCTD21 (ENSMNEG00000009764) #11	ALG8 (ENSMNEG00000033047) #12	NDUFC2 (ENSMNEG00000027120) #13	KCTD14 (ENSMNEG00000042231) #16	INTS4 (ENSMNEG00000044252) #17	AAMDC (ENSMNEG00000029653) #18	RSF1 (ENSMNEG00000043815) #19	CLNS1A (ENSMNEG00000036050) #21	AQP11 (ENSMNEG00000044078) #20	PAK1 (ENSMNEG00000044840) #22	ENSMNEG00000028157	GDPD4 (ENSMNEG00000038159) #23	MYO7A (ENSMNEG00000030597) #24	CAPN5 (ENSMNEG00000037879) #26	B3GNT6 (ENSMNEG00000035934) #27	ACER3 (ENSMNEG00000030819) #28	TSKU (ENSMNEG00000013194) #29	LRRC32 (ENSMNEG00000041843) #30	EMSY (ENSMNEG00000041511) #31	ENSMNEG00000025096	GVQW3 (ENSMNEG00000035110) #32	ENSMNEG00000014529 #33	WNT11 (ENSMNEG00000042384) #34	UVRAG (ENSMNEG00000036116) #35	DGAT2 (ENSMNEG00000045455) #36
Macaca_a	ANCESTRAL SPECIES	3	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00910000147490	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.y.a.d #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Rhesus	MODERN SPECIES	5	NARS2 (ENSMMUG00000004649) #8	GAB2 (ENSMMUG00000017477) #9	USP35 (ENSMMUG00000017476) #10	ENSMMUG00000051695	KCTD21 (ENSMMUG00000017473) #11	ALG8 (ENSMMUG00000017472) #12	THRSP (ENSMMUG00000017470) #14	NDUFC2 (ENSMMUG00000050672) #13	KCTD14 (ENSMMUG00000017471) #16	ENSMMUG00000063047	INTS4 (ENSMMUG00000010120) #17	AAMDC (ENSMMUG00000010119) #18	RSF1 (ENSMMUG00000017355) #19	CLNS1A (ENSMMUG00000018945) #21	AQP11 (ENSMMUG00000018944) #20	PAK1 (ENSMMUG00000001387) #22	GDPD4 (ENSMMUG00000018188) #23	MYO7A (ENSMMUG00000018178) #24	OMP (ENSMMUG00000055575) #25	CAPN5 (ENSMMUG00000018174) #26	B3GNT6 (ENSMMUG00000050318) #27	ENSMMUG00000050497	ACER3 (ENSMMUG00000018168) #28	TSKU (ENSMMUG00000058889) #29	LRRC32 (ENSMMUG00000022403) #30	EMSY (ENSMMUG00000022401) #31	GVQW3 (ENSMMUG00000059619) #32	THAP12 (ENSMMUG00000048604) #33	WNT11 (ENSMMUG00000051614) #34	UVRAG (ENSMMUG00000000187) #35	DGAT2 (ENSMMUG00000000185) #36
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00390000008403.ab	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00940000155959.n	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Mas night monkey	MODERN SPECIES	575	GAB2 (ENSANAG00000033147) #9	USP35 (ENSANAG00000023780) #10	KCTD21 (ENSANAG00000008887) #11	ALG8 (ENSANAG00000028151) #12	ENSANAG00000035549	NDUFC2 (ENSANAG00000032706) #13	KCTD14 (ENSANAG00000032585) #16	ENSANAG00000037311	INTS4 (ENSANAG00000005253) #17	AAMDC (ENSANAG00000031884) #18	RSF1 (ENSANAG00000024984) #19	ENSANAG00000010001 #21	AQP11 (ENSANAG00000032006) #20	ENSANAG00000031650	ENSANAG00000029802	PAK1 (ENSANAG00000019562) #22	GDPD4 (ENSANAG00000030211) #23	MYO7A (ENSANAG00000023144) #24	CAPN5 (ENSANAG00000032657) #26	ACER3 (ENSANAG00000031758) #28	TSKU (ENSANAG00000028760) #29	LRRC32 (ENSANAG00000036098) #30	EMSY (ENSANAG00000037605) #31	GVQW3 (ENSANAG00000033324) #32	THAP12 (ENSANAG00000034553) #33	WNT11 (ENSANAG00000023221) #34	UVRAG (ENSANAG00000037389) #35	DGAT2 (ENSANAG00000033159) #36	MOGAT2 (ENSANAG00000030684) #37	ENSANAG00000025561	ENSANAG00000028881
Cebidae	ANCESTRAL SPECIES		ENSGT00390000008403.ab	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00940000155959.n	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Marmoset	MODERN SPECIES	2	KCTD21 (ENSCJAG00000043935) #11	ALG8 (ENSCJAG00000014792) #12	NDUFC2 (ENSCJAG00000066176) #13	ENSCJAG00000014820	THRSP (ENSCJAG00000022085) #14	ENSCJAG00000021760	KCTD14 (ENSCJAG00000014824) #16	INTS4 (ENSCJAG00000014825) #17	ENSCJAG00000077936	ENSCJAG00000014890 #18	RSF1 (ENSCJAG00000014899) #19	CLNS1A (ENSCJAG00000014927) #21	AQP11 (ENSCJAG00000014939) #20	ENSCJAG00000073608	ENSCJAG00000070241	PAK1 (ENSCJAG00000014954) #22	GDPD4 (ENSCJAG00000015002) #23	ENSCJAG00000077361	MYO7A (ENSCJAG00000015009) #24	ENSCJAG00000081839	CAPN5 (ENSCJAG00000015126) #26	B3GNT6 (ENSCJAG00000048141) #27	ACER3 (ENSCJAG00000015179) #28	TSKU (ENSCJAG00000015198) #29	LRRC32 (ENSCJAG00000041496) #30	EMSY (ENSCJAG00000015204) #31	GVQW3 (ENSCJAG00000015286) #32	THAP12 (ENSCJAG00000012300) #33	WNT11 (ENSCJAG00000015296) #34	UVRAG (ENSCJAG00000015319) #35	DGAT2 (ENSCJAG00000015337) #36
Cebidae_a	ANCESTRAL SPECIES	10																ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Bolivian squirrel monkey	MODERN SPECIES	212														ENSSBOG00000025989	ENSSBOG00000022878	PAK1 (ENSSBOG00000035209) #22	GDPD4 (ENSSBOG00000030967) #23	MYO7A (ENSSBOG00000022003) #24	CAPN5 (ENSSBOG00000025919) #26	B3GNT6 (ENSSBOG00000023913) #27	ACER3 (ENSSBOG00000024052) #28	TSKU (ENSSBOG00000028360) #29	SPATA19 (ENSSBOG00000026868)	IGSF9B (ENSSBOG00000025414)	JAM3 (ENSSBOG00000020318)	NCAPD3 (ENSSBOG00000031207)	VPS26B (ENSSBOG00000029454)	THYN1 (ENSSBOG00000027498)	ACAD8 (ENSSBOG00000029736)	GLB1L3 (ENSSBOG00000023285)	GLB1L2 (ENSSBOG00000020582)
Capuchin	MODERN SPECIES	79						ANGPTL5 (ENSCCAG00000026522)	CEP126 (ENSCCAG00000033127)	CFAP300 (ENSCCAG00000033252)	YAP1 (ENSCCAG00000035003)	BIRC3 (ENSCCAG00000026847)	ENSCCAG00000036738	ENSCCAG00000034552	ENSCCAG00000037949	ENSCCAG00000037522	ENSCCAG00000008865	PAK1 (ENSCCAG00000027918) #22	GDPD4 (ENSCCAG00000025757) #23	MYO7A (ENSCCAG00000035696) #24	CAPN5 (ENSCCAG00000032879) #26	ACER3 (ENSCCAG00000022320) #28	LRRC32 (ENSCCAG00000036797) #30	EMSY (ENSCCAG00000033043) #31	GVQW3 (ENSCCAG00000017675) #32	THAP12 (ENSCCAG00000030247) #33	WNT11 (ENSCCAG00000006507) #34	UVRAG (ENSCCAG00000004406) #35	DGAT2 (ENSCCAG00000025871) #36	MOGAT2 (ENSCCAG00000033399) #37	ENSCCAG00000019602	MAP6 (ENSCCAG00000038045)	SERPINH1 (ENSCCAG00000036630)
Tarsier	MODERN SPECIES	5561																PAK1 (ENSTSYG00000005124) #22	ENSTSYG00000032878	GDPD4 (ENSTSYG00000014245) #23	MYO7A (ENSTSYG00000026178) #24	CAPN5 (ENSTSYG00000028898) #26	ENSTSYG00000010273	ACER3 (ENSTSYG00000012393) #28
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Mouse lemur	MODERN SPECIES	27	GAB2 (ENSMICG00000015054) #9	NARS2 (ENSMICG00000015093) #8	TENM4 (ENSMICG00000015118) #7	PRCP (ENSMICG00000011983)	DDIAS (ENSMICG00000033865)	RAB30 (ENSMICG00000012002)	PCF11 (ENSMICG00000008986)	ANKRD42 (ENSMICG00000009004)	CCDC90B (ENSMICG00000038111)	ENSMICG00000027095	RSF1 (ENSMICG00000014613) #19	CLNS1A (ENSMICG00000047894) #21	AQP11 (ENSMICG00000043193) #20	ENSMICG00000037612	ENSMICG00000046772	PAK1 (ENSMICG00000015365) #22	GDPD4 (ENSMICG00000046391) #23	MYO7A (ENSMICG00000013944) #24	CAPN5 (ENSMICG00000013928) #26	ACER3 (ENSMICG00000013908) #28	LRRC32 (ENSMICG00000026468) #30	EMSY (ENSMICG00000006143) #31	THAP12 (ENSMICG00000006139) #33	WNT11 (ENSMICG00000015306) #34	UVRAG (ENSMICG00000015281) #35	DGAT2 (ENSMICG00000015277) #36	MOGAT2 (ENSMICG00000015272) #37	MAP6 (ENSMICG00000015256)	SERPINH1 (ENSMICG00000015249)	GDPD5 (ENSMICG00000011193)	KLHL35 (ENSMICG00000045018)
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00530000063516.a.a.c.a ##33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Coquerels sifaka	MODERN SPECIES	338															ENSPCOG00000024182	PAK1 (ENSPCOG00000015010) #22	GDPD4 (ENSPCOG00000026020) #23	MYO7A (ENSPCOG00000001371) #24	CAPN5 (ENSPCOG00000021800) #26	ACER3 (ENSPCOG00000013273) #28	LRRC32 (ENSPCOG00000028697) #30	EMSY (ENSPCOG00000020972) #31	ENSPCOG00000027615 ##33	WNT11 (ENSPCOG00000014058) #34	UVRAG (ENSPCOG00000020635) #35	DGAT2 (ENSPCOG00000019069) #36	MOGAT2 (ENSPCOG00000017739) #37	MAP6 (ENSPCOG00000028415)	SERPINH1 (ENSPCOG00000016388)	GDPD5 (ENSPCOG00000023523)	KLHL35 (ENSPCOG00000012453)
Greater bamboo lemur	MODERN SPECIES	970	NARS2 (ENSPSMG00000013898) #8	GAB2 (ENSPSMG00000013794) #9	USP35 (ENSPSMG00000013781) #10	ENSPSMG00000013755	KCTD21 (ENSPSMG00000013751) #11	ALG8 (ENSPSMG00000013689) #12	NDUFC2 (ENSPSMG00000013598) #13	THRSP (ENSPSMG00000013585) #14	KCTD14 (ENSPSMG00000013579) #16	ENSPSMG00000013577	INTS4 (ENSPSMG00000013557) #17	AAMDC (ENSPSMG00000013511) #18	RSF1 (ENSPSMG00000013477) #19	CLNS1A (ENSPSMG00000013404) #21	AQP11 (ENSPSMG00000013331) #20	PAK1 (ENSPSMG00000013092) #22	ENSPSMG00000012895	GDPD4 (ENSPSMG00000012887) #23	MYO7A (ENSPSMG00000012875) #24	CAPN5 (ENSPSMG00000012780) #26	B3GNT6 (ENSPSMG00000012738) #27	ACER3 (ENSPSMG00000012733) #28	ENSPSMG00000012716 #29
Bushbaby	MODERN SPECIES	116	TENM4 (ENSOGAG00000011916) #7	ENSOGAG00000031293	NARS2 (ENSOGAG00000011914) #8	GAB2 (ENSOGAG00000013101) #9	USP35 (ENSOGAG00000013098) #10	KCTD21 (ENSOGAG00000005206) #11	ALG8 (ENSOGAG00000030703) #12	ENSOGAG00000005017 #13	THRSP (ENSOGAG00000000005) #14	KCTD14 (ENSOGAG00000004626) #16	INTS4 (ENSOGAG00000008618) #17	AAMDC (ENSOGAG00000008615) #18	RSF1 (ENSOGAG00000002473) #19	CLNS1A (ENSOGAG00000009170) #21	AQP11 (ENSOGAG00000009169) #20	PAK1 (ENSOGAG00000008289) #22	GDPD4 (ENSOGAG00000016874) #23	MYO7A (ENSOGAG00000016862) #24	CAPN5 (ENSOGAG00000016859) #26	B3GNT6 (ENSOGAG00000027236) #27	ACER3 (ENSOGAG00000016854) #28	TSKU (ENSOGAG00000016850) #29	ENSOGAG00000029463	LRRC32 (ENSOGAG00000010967) #30	EMSY (ENSOGAG00000011434) #31	GVQW3 (ENSOGAG00000027877) #32	ENSOGAG00000001569 #33	WNT11 (ENSOGAG00000001568) #34	UVRAG (ENSOGAG00000025371) #35	DGAT2 (ENSOGAG00000000330) #36	MOGAT2 (ENSOGAG00000000329) #37
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00940000169601	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34
Tree shrew	MODERN SPECIES	5395																PAK1 (ENSTBEG00000003418) #22	ENSTBEG00000002904 #23
Glires	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00940000169601	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00980000198692	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000156163.g.b
Rabbit	MODERN SPECIES		NARS2 (ENSOCUG00000017469) #8	GAB2 (ENSOCUG00000017463) #9	USP35 (ENSOCUG00000021262) #10	ENSOCUG00000005752	KCTD21 (ENSOCUG00000027266) #11	ALG8 (ENSOCUG00000011266) #12	THRSP (ENSOCUG00000000957) #14	KCTD14 (ENSOCUG00000005742) #16	INTS4 (ENSOCUG00000010638) #17	AAMDC (ENSOCUG00000025658) #18	RSF1 (ENSOCUG00000011923) #19	AQP11 (ENSOCUG00000003238) #20	ENSOCUG00000020951	CLNS1A (ENSOCUG00000024393) #21	ENSOCUG00000009905	PAK1 (ENSOCUG00000010538) #22	ENSOCUG00000007181 #23	ENSOCUG00000030870	ENSOCUG00000029270 #23	MYO7A (ENSOCUG00000023355) #24	CAPN5 (ENSOCUG00000025830) #26	B3GNT6 (ENSOCUG00000013809) #27	ACER3 (ENSOCUG00000021559) #28	TSKU (ENSOCUG00000021411) #29	LRRC32 (ENSOCUG00000015394) #30	EMSY (ENSOCUG00000017880) #31	ENSOCUG00000035359	THAP12 (ENSOCUG00000009178) #33	WNT11 (ENSOCUG00000001726) #34	UVRAG (ENSOCUG00000014223) #35	ENSOCUG00000033370
Pika	MODERN SPECIES	2115																PAK1 (ENSOPRG00000004353) #22
Rodentia	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Kangaroo rat	MODERN SPECIES	341	ENSDORG00000010504	ENSDORG00000009384	ENSDORG00000003131	Fam181b (ENSDORG00000010022)	Tenm4 (ENSDORG00000005982) #7	ENSDORG00000027485	Nars2 (ENSDORG00000014688) #8	Gab2 (ENSDORG00000009924) #9	Usp35 (ENSDORG00000009922) #10	Kctd21 (ENSDORG00000009921) #11	Alg8 (ENSDORG00000015672) #12	Ints4 (ENSDORG00000013202) #17	Aamdc (ENSDORG00000002703) #18	Rsf1 (ENSDORG00000015222) #19	ENSDORG00000011662	Pak1 (ENSDORG00000015484) #22	Myo7a (ENSDORG00000014955) #24	Capn5 (ENSDORG00000014952) #26	Tsku (ENSDORG00000005661) #29	ENSDORG00000028416	Lrrc32 (ENSDORG00000027997) #30	Emsy (ENSDORG00000008129) #31	ENSDORG00000030214 #33	Wnt11 (ENSDORG00000005892) #34	Uvrag (ENSDORG00000015912) #35	Dgat2 (ENSDORG00000015911) #36	ENSDORG00000025798	ENSDORG00000002978	ENSDORG00000002976	Klhl35 (ENSDORG00000002975)	Rps3 (ENSDORG00000002974)
Myomorpha	ANCESTRAL SPECIES	13	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	59	ENSJJAG00000022231	Fzd1 (ENSJJAG00000012179)	Tenm4 (ENSJJAG00000011108) #7	Nars2 (ENSJJAG00000015019) #8	ENSJJAG00000011765	Gab2 (ENSJJAG00000020223) #9	Usp35 (ENSJJAG00000013300) #10	Alg8 (ENSJJAG00000018486) #12	Ndufc2 (ENSJJAG00000014939) #13	Kctd14 (ENSJJAG00000022138) #16	Ints4 (ENSJJAG00000018661) #17	ENSJJAG00000011302 #18	Rsf1 (ENSJJAG00000016956) #19	ENSJJAG00000006333	Aqp11 (ENSJJAG00000023969) #20	ENSJJAG00000013179 #22	Gdpd4 (ENSJJAG00000018120) #23	Myo7a (ENSJJAG00000013078) #24	Capn5 (ENSJJAG00000021999) #26	Acer3 (ENSJJAG00000016119) #28	Tsku (ENSJJAG00000012703) #29	ENSJJAG00000022648	Lrrc32 (ENSJJAG00000000443) #30	Emsy (ENSJJAG00000022026) #31	ENSJJAG00000013737 #33	Wnt11 (ENSJJAG00000014979) #34	Uvrag (ENSJJAG00000004695) #35	Dgat2 (ENSJJAG00000019379) #36	Mogat2 (ENSJJAG00000023310) #37	Map6 (ENSJJAG00000014715)	Serpinh1 (ENSJJAG00000023536)
Lesser Egyptian jerboa	MODERN SPECIES	89	Gkn1 (ENSJJAG00000021899)	Antxr1 (ENSJJAG00000011767)	Gfpt1 (ENSJJAG00000022727)	ENSJJAG00000012483	Nfu1 (ENSJJAG00000022262)	Aak1 (ENSJJAG00000011646)	ENSJJAG00000004937	Cpne8 (ENSJJAG00000015994)	Kif21a (ENSJJAG00000001646)	Abcd2 (ENSJJAG00000006865)	ENSJJAG00000000818	Slc2a13 (ENSJJAG00000021456)	Lrrk2 (ENSJJAG00000013233)	Cntn1 (ENSJJAG00000021782)	ENSJJAG00000015792	ENSJJAG00000013828 #22	Pdzrn4 (ENSJJAG00000000770)	ENSJJAG00000023385	ENSJJAG00000020445	Gxylt1 (ENSJJAG00000010228)	Yaf2 (ENSJJAG00000000324)	ENSJJAG00000023606	ENSJJAG00000021636	ENSJJAG00000014487	Prickle1 (ENSJJAG00000011701)
Muroidea	ANCESTRAL SPECIES	12	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1254	Tenm4 (ENSNGAG00000018298) #7	Nars2 (ENSNGAG00000000914) #8	Gab2 (ENSNGAG00000001090) #9	Usp35 (ENSNGAG00000012907) #10	Kctd21 (ENSNGAG00000018996) #11	ENSNGAG00000019156	Alg8 (ENSNGAG00000020942) #12	Ndufc2 (ENSNGAG00000011240) #13	Thrsp (ENSNGAG00000012385) #14	Kctd14 (ENSNGAG00000014816) #16	Ints4 (ENSNGAG00000010580) #17	Aamdc (ENSNGAG00000005085) #18	Rsf1 (ENSNGAG00000019337) #19	ENSNGAG00000019313	Aqp11 (ENSNGAG00000000912) #20	Pak1 (ENSNGAG00000011050) #22	Gdpd4 (ENSNGAG00000008449) #23	Myo7a (ENSNGAG00000006076) #24	Capn5 (ENSNGAG00000015774) #26	Omp (ENSNGAG00000013730) #25	B3gnt6 (ENSNGAG00000014322) #27	Acer3 (ENSNGAG00000018623) #28	Tsku (ENSNGAG00000015490) #29	Gucy2d (ENSNGAG00000020383)	Lrrc32 (ENSNGAG00000010300) #30	Emsy (ENSNGAG00000013674) #31	ENSNGAG00000013016 #33	Wnt11 (ENSNGAG00000013425) #34	Uvrag (ENSNGAG00000018199) #35	Dgat2 (ENSNGAG00000012414) #36	Mogat2 (ENSNGAG00000015554) #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958.b #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877.d #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Cricetidae_B	ANCESTRAL SPECIES	26	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958.b #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00940000165195	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877.d #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000018108 #9	Usp35 (ENSPEMG00000016188) #10	ENSPEMG00000024646	Kctd21 (ENSPEMG00000024492) #11	Alg8 (ENSPEMG00000020484) #12	Ndufc2 (ENSPEMG00000020962) #13	Thrsp (ENSPEMG00000020398) #14	Kctd14 (ENSPEMG00000020478) #16	Aamdc (ENSPEMG00000014432) #18	ENSPEMG00000024853	Rsf1 (ENSPEMG00000014926) #19	Clns1a (ENSPEMG00000009380) #21	ENSPEMG00000030074	Aqp11 (ENSPEMG00000000856) #20	ENSPEMG00000026666	Pak1 (ENSPEMG00000008661) #22	Gdpd4 (ENSPEMG00000017863) #23	Myo7a (ENSPEMG00000015770) #24	Capn5 (ENSPEMG00000008442) #26	B3gnt6 (ENSPEMG00000016161) #27	ENSPEMG00000028950	Acer3 (ENSPEMG00000020360) #28	Tsku (ENSPEMG00000028771) #29	ENSPEMG00000024681	ENSPEMG00000028876	ENSPEMG00000026314	Lrrc32 (ENSPEMG00000024699) #30	Emsy (ENSPEMG00000023648) #31	Thap12 (ENSPEMG00000013204) #33	Wnt11 (ENSPEMG00000021569) #34	Uvrag (ENSPEMG00000028043) #35
Prairie vole	MODERN SPECIES	9	Prss23 (ENSMOCG00000022033)	ENSMOCG00000007773	Tenm4 (ENSMOCG00000007967) #7	Nars2 (ENSMOCG00000004938) #8	Gab2 (ENSMOCG00000016973) #9	Usp35 (ENSMOCG00000015178) #10	Kctd21 (ENSMOCG00000009332) #11	Alg8 (ENSMOCG00000018035) #12	Ndufc2 (ENSMOCG00000014768) #13	Thrsp (ENSMOCG00000014398) #14	Ints4 (ENSMOCG00000015641) #17	Aamdc (ENSMOCG00000013242) #18	Rsf1 (ENSMOCG00000018606) #19	ENSMOCG00000015937	Aqp11 (ENSMOCG00000015165) #20	Pak1 (ENSMOCG00000012909) #22	Gdpd4 (ENSMOCG00000019089) #23	Myo7a (ENSMOCG00000009126) #24	Capn5 (ENSMOCG00000015250) #26	B3gnt6 (ENSMOCG00000010357) #27	Acer3 (ENSMOCG00000014380) #28	Tsku (ENSMOCG00000007489) #29	Gucy2d (ENSMOCG00000003117)	Lrrc32 (ENSMOCG00000017378) #30	Emsy (ENSMOCG00000008098) #31	Thap12 (ENSMOCG00000021908) #33	Wnt11 (ENSMOCG00000021029) #34	Uvrag (ENSMOCG00000016758) #35	Dgat2 (ENSMOCG00000012378) #36	Mogat2 (ENSMOCG00000007716) #37	Map6 (ENSMOCG00000021641)
Cricetinae	ANCESTRAL SPECIES	15	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958.b #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877.d #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Chinese hamster chok1gshd	MODERN SPECIES	101	ENSCGRG00001010169	Nars2 (ENSCGRG00001014939) #8	Gab2 (ENSCGRG00001012091) #9	Usp35 (ENSCGRG00001015950) #10	Kctd21 (ENSCGRG00001007277) #11	Alg8 (ENSCGRG00001012346) #12	Ndufc2 (ENSCGRG00001017125) #13	Thrsp (ENSCGRG00001006063) #14	ENSCGRG00001018658 #16	Ints4 (ENSCGRG00001017981) #17	ENSCGRG00001012029	Aamdc (ENSCGRG00001016432) #18	Rsf1 (ENSCGRG00001008301) #19	Clns1a (ENSCGRG00001015805) #21	Aqp11 (ENSCGRG00001017793) #20	Pak1 (ENSCGRG00001022975) #22	Myo7a (ENSCGRG00001014824) #24	Capn5 (ENSCGRG00001021666) #26	B3gnt6 (ENSCGRG00001000647) #27	Acer3 (ENSCGRG00001013571) #28	ENSCGRG00001024060	Tsku (ENSCGRG00001012773) #29	Gucy2d (ENSCGRG00001012034)	Lrrc32 (ENSCGRG00001007026) #30	ENSCGRG00001019331 #31	Thap12 (ENSCGRG00001021774) #33	Wnt11 (ENSCGRG00001022788) #34	Uvrag (ENSCGRG00001006874) #35	Dgat2 (ENSCGRG00001020895) #36	Mogat2 (ENSCGRG00001004764) #37	Map6 (ENSCGRG00001012636)
Golden Hamster	MODERN SPECIES	660	ENSMAUG00000020090	ENSMAUG00000019787	Tenm4 (ENSMAUG00000019277) #7	Nars2 (ENSMAUG00000002138) #8	ENSMAUG00000008257 #9	Usp35 (ENSMAUG00000003032) #10	Alg8 (ENSMAUG00000012899) #12	Ndufc2 (ENSMAUG00000009562) #13	Thrsp (ENSMAUG00000013848) #14	Kctd14 (ENSMAUG00000015696) #16	Ints4 (ENSMAUG00000007877) #17	Aamdc (ENSMAUG00000001048) #18	Rsf1 (ENSMAUG00000009412) #19	Clns1a (ENSMAUG00000019637) #21	Aqp11 (ENSMAUG00000010913) #20	Pak1 (ENSMAUG00000010646) #22	Gdpd4 (ENSMAUG00000014553) #23	Myo7a (ENSMAUG00000002971) #24	Capn5 (ENSMAUG00000017431) #26	Omp (ENSMAUG00000017325) #25	B3gnt6 (ENSMAUG00000016711) #27	Acer3 (ENSMAUG00000021627) #28	Tsku (ENSMAUG00000014311) #29	Gucy2d (ENSMAUG00000010563)	ENSMAUG00000017794 #30	Emsy (ENSMAUG00000017757) #31	ENSMAUG00000013228	Thap12 (ENSMAUG00000000897) #33	Wnt11 (ENSMAUG00000008427) #34	Uvrag (ENSMAUG00000022039) #35	Dgat2 (ENSMAUG00000009895) #36
Murinae	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Mus	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Mus_A	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Mus_B	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Mouse	MODERN SPECIES	16	Fam181b (ENSMUSG00000051515)	Tenm4 (ENSMUSG00000048078) #7	Nars2 (ENSMUSG00000018995) #8	Gab2 (ENSMUSG00000004508) #9	Usp35 (ENSMUSG00000035713) #10	Kctd21 (ENSMUSG00000044952) #11	Alg8 (ENSMUSG00000035704) #12	Ndufc2 (ENSMUSG00000030647) #13	Thrsp (ENSMUSG00000035686) #14	Kctd14 (ENSMUSG00000051727) #16	Ints4 (ENSMUSG00000025133) #17	Aamdc (ENSMUSG00000035642) #18	Rsf1 (ENSMUSG00000035623) #19	Clns1a (ENSMUSG00000025439) #21	Aqp11 (ENSMUSG00000042797) #20	Pak1 (ENSMUSG00000030774) #22	Gdpd4 (ENSMUSG00000035582) #23	Myo7a (ENSMUSG00000030761) #24	Capn5 (ENSMUSG00000035547) #26	Omp (ENSMUSG00000074006) #25	B3gnt6 (ENSMUSG00000074004) #27	Acer3 (ENSMUSG00000030760) #28	Tsku (ENSMUSG00000049580) #29	Gucy2d (ENSMUSG00000074003)	Lrrc32 (ENSMUSG00000090958) #30	Emsy (ENSMUSG00000035401) #31	Thap12 (ENSMUSG00000030753) #33	Wnt11 (ENSMUSG00000015957) #34	Uvrag (ENSMUSG00000035354) #35	Dgat2 (ENSMUSG00000030747) #36	Mogat2 (ENSMUSG00000052396) #37
Mus_C	ANCESTRAL SPECIES	13	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00900000143755	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Steppe mouse	MODERN SPECIES	3349								Kctd14 (ENSMSIG00000025623) #16	Ints4 (ENSMSIG00000025677) #17	Aamdc (ENSMSIG00000025743) #18	Rsf1 (ENSMSIG00000025856) #19	ENSMSIG00000025898	ENSMSIG00000025904	Clns1a (ENSMSIG00000025912) #21	Aqp11 (ENSMSIG00000025922) #20	Pak1 (ENSMSIG00000025929) #22	ENSMSIG00000025967 #23	ENSMSIG00000026060	Myo7a (ENSMSIG00000026065) #24	Capn5 (ENSMSIG00000026611) #26	B3gnt6 (ENSMSIG00000026629) #27	Acer3 (ENSMSIG00000026641) #28	Tsku (ENSMSIG00000026651) #29	ENSMSIG00000026660	Gucy2d (ENSMSIG00000026666)	Lrrc32 (ENSMSIG00000026734) #30	ENSMSIG00000026793	Emsy (ENSMSIG00000026804) #31	Thap12 (ENSMSIG00000027087) #33	Wnt11 (ENSMSIG00000027102) #34	Uvrag (ENSMSIG00000027125) #35
spretus	MODERN SPECIES	16	Prcp (MGP_SPRETEiJ_G0031104)	Tenm4 (MGP_SPRETEiJ_G0031105) #7	Nars2 (MGP_SPRETEiJ_G0031106) #8	Gab2 (MGP_SPRETEiJ_G0031107) #9	Usp35 (MGP_SPRETEiJ_G0031108) #10	Kctd21 (MGP_SPRETEiJ_G0031109) #11	Alg8 (MGP_SPRETEiJ_G0031110) #12	Ndufc2 (MGP_SPRETEiJ_G0031111) #13	Thrsp (MGP_SPRETEiJ_G0031112) #14	MGP_SPRETEiJ_G0031113	Ints4 (MGP_SPRETEiJ_G0031114) #17	Aamdc (MGP_SPRETEiJ_G0031115) #18	Rsf1 (MGP_SPRETEiJ_G0031116) #19	Clns1a (MGP_SPRETEiJ_G0031117) #21	Aqp11 (MGP_SPRETEiJ_G0031118) #20	Pak1 (MGP_SPRETEiJ_G0031119) #22	Gdpd4 (MGP_SPRETEiJ_G0031120) #23	Myo7a (MGP_SPRETEiJ_G0031121) #24	Capn5 (MGP_SPRETEiJ_G0031122) #26	Omp (MGP_SPRETEiJ_G0031123) #25	B3gnt6 (MGP_SPRETEiJ_G0031124) #27	Acer3 (MGP_SPRETEiJ_G0031125) #28	Tsku (MGP_SPRETEiJ_G0031126) #29	Gucy2d (MGP_SPRETEiJ_G0031127)	Lrrc32 (MGP_SPRETEiJ_G0031128) #30	Emsy (MGP_SPRETEiJ_G0031129) #31	MGP_SPRETEiJ_G0031130 ##33	Wnt11 (MGP_SPRETEiJ_G0031131) #34	Uvrag (MGP_SPRETEiJ_G0031132) #35	Dgat2 (MGP_SPRETEiJ_G0031133) #36	Mogat2 (MGP_SPRETEiJ_G0031134) #37
Ryukyu mouse	MODERN SPECIES	16	Prcp (MGP_CAROLIEiJ_G0029994)	Tenm4 (MGP_CAROLIEiJ_G0029995) #7	Nars2 (MGP_CAROLIEiJ_G0029996) #8	Gab2 (MGP_CAROLIEiJ_G0029997) #9	Usp35 (MGP_CAROLIEiJ_G0029998) #10	Kctd21 (MGP_CAROLIEiJ_G0029999) #11	Alg8 (MGP_CAROLIEiJ_G0030000) #12	Ndufc2 (MGP_CAROLIEiJ_G0030001) #13	Thrsp (MGP_CAROLIEiJ_G0030002) #14	MGP_CAROLIEiJ_G0030003	Ints4 (MGP_CAROLIEiJ_G0030004) #17	Aamdc (MGP_CAROLIEiJ_G0030005) #18	Rsf1 (MGP_CAROLIEiJ_G0030006) #19	Clns1a (MGP_CAROLIEiJ_G0030007) #21	Aqp11 (MGP_CAROLIEiJ_G0030008) #20	Pak1 (MGP_CAROLIEiJ_G0030009) #22	Gdpd4 (MGP_CAROLIEiJ_G0030010) #23	Myo7a (MGP_CAROLIEiJ_G0030011) #24	Capn5 (MGP_CAROLIEiJ_G0030012) #26	Omp (MGP_CAROLIEiJ_G0030013) #25	B3gnt6 (MGP_CAROLIEiJ_G0030014) #27	Acer3 (MGP_CAROLIEiJ_G0030015) #28	Tsku (MGP_CAROLIEiJ_G0030016) #29	Gucy2d (MGP_CAROLIEiJ_G0030017)	Lrrc32 (MGP_CAROLIEiJ_G0030018) #30	Emsy (MGP_CAROLIEiJ_G0030019) #31	Thap12 (MGP_CAROLIEiJ_G0030020) #33	Wnt11 (MGP_CAROLIEiJ_G0030021) #34	Uvrag (MGP_CAROLIEiJ_G0030022) #35	MGP_CAROLIEiJ_G0030023 #36	Mogat2 (MGP_CAROLIEiJ_G0030024) #37
Shrew mouse	MODERN SPECIES		Tenm4 (MGP_PahariEiJ_G0013215) #7	MGP_PahariEiJ_G0013216	Nars2 (MGP_PahariEiJ_G0013217) #8	Gab2 (MGP_PahariEiJ_G0013218) #9	Usp35 (MGP_PahariEiJ_G0013219) #10	Kctd21 (MGP_PahariEiJ_G0013220) #11	Alg8 (MGP_PahariEiJ_G0013221) #12	Ndufc2 (MGP_PahariEiJ_G0013222) #13	Thrsp (MGP_PahariEiJ_G0013223) #14	MGP_PahariEiJ_G0013224 #16	Ints4 (MGP_PahariEiJ_G0013225) #17	Aamdc (MGP_PahariEiJ_G0013226) #18	Rsf1 (MGP_PahariEiJ_G0013227) #19	Clns1a (MGP_PahariEiJ_G0013228) #21	Aqp11 (MGP_PahariEiJ_G0013229) #20	Pak1 (MGP_PahariEiJ_G0013230) #22	Gdpd4 (MGP_PahariEiJ_G0013231) #23	Myo7a (MGP_PahariEiJ_G0013232) #24	Capn5 (MGP_PahariEiJ_G0013233) #26	Omp (MGP_PahariEiJ_G0013234) #25	B3gnt6 (MGP_PahariEiJ_G0013235) #27	Acer3 (MGP_PahariEiJ_G0013236) #28	Tsku (MGP_PahariEiJ_G0013237) #29	Gucy2d (MGP_PahariEiJ_G0013238)	Lrrc32 (MGP_PahariEiJ_G0013239) #30	Emsy (MGP_PahariEiJ_G0013240) #31	Thap12 (MGP_PahariEiJ_G0013241) #33	Wnt11 (MGP_PahariEiJ_G0013242) #34	Uvrag (MGP_PahariEiJ_G0013243) #35	Dgat2 (MGP_PahariEiJ_G0013244) #36	Mogat2 (MGP_PahariEiJ_G0013245) #37
Rat	DUPLICATION
Rat	MODERN SPECIES		Bloc1s2 (ENSRNOG00000012684)	Cwf19l1 (ENSRNOG00000012763)	Chuk (ENSRNOG00000022485)	Erlin1 (ENSRNOG00000012911)	Cyp2c23 (ENSRNOG00000013291)	Cpn1 (ENSRNOG00000013439)	Dnmbp (ENSRNOG00000050742)	Abcc2 (ENSRNOG00000046727)	Cutc (ENSRNOG00000017298)	Cox15 (ENSRNOG00000017230)	Entpd7 (ENSRNOG00000016883)	Slc25a28 (ENSRNOG00000016751)	Nkx2-3 (ENSRNOG00000016656)	Got1 (ENSRNOG00000016356)	Cnnm1 (ENSRNOG00000016302)	ENSRNOG00000065211 #22	Hpse2 (ENSRNOG00000064037)	Hps1 (ENSRNOG00000045838)	Pyroxd2 (ENSRNOG00000015807)	Loxl4 (ENSRNOG00000015727)	R3hcc1l (ENSRNOG00000051256)	Crtac1 (ENSRNOG00000015220)	Golga7b (ENSRNOG00000015051)	AABR07006871.1 (ENSRNOG00000053536)	Sfrp5 (ENSRNOG00000014940)	Zfyve27 (ENSRNOG00000014903)	Marveld1 (ENSRNOG00000042620)	Avpi1 (ENSRNOG00000014828)	Pi4k2a (ENSRNOG00000014675)	Morn4 (ENSRNOG00000027156)	MGC93861 (ENSRNOG00000069762)
Rat	MODERN SPECIES		Tenm4 (ENSRNOG00000011151) #7	Nars2 (ENSRNOG00000011476) #8	Gab2 (ENSRNOG00000011882) #9	Usp35 (ENSRNOG00000024961) #10	Kctd21 (ENSRNOG00000024793) #11	ENSRNOG00000071147	Alg8 (ENSRNOG00000012292) #12	Ndufc2 (ENSRNOG00000012383) #13	Thrsp (ENSRNOG00000012404) #14	Kctd14 (ENSRNOG00000012494) #16	Ints4 (ENSRNOG00000012552) #17	Aamdc (ENSRNOG00000012584) #18	Rsf1 (ENSRNOG00000024194) #19	Clns1a (ENSRNOG00000012788) #21	Aqp11 (ENSRNOG00000013358) #20	Pak1 (ENSRNOG00000029784) #22	Gdpd4 (ENSRNOG00000028470) #23	ENSRNOG00000064082	Myo7a (ENSRNOG00000013641) #24	Capn5 (ENSRNOG00000014251) #26	Omp (ENSRNOG00000068492) #25	B3gnt6 (ENSRNOG00000014471) #27	Acer3 (ENSRNOG00000036866) #28	ENSRNOG00000065313	Tsku (ENSRNOG00000027784) #29	Gucy2e (ENSRNOG00000015058)	Lrrc32 (ENSRNOG00000015310) #30	Emsy (ENSRNOG00000015560) #31	Thap12 (ENSRNOG00000053923) #33	Wnt11 (ENSRNOG00000015982) #34	RGD1561870 (ENSRNOG00000042782)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Marmotini	ANCESTRAL SPECIES	28	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.ab #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.ab.a #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.d ##33	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Arctic ground squirrel	MODERN SPECIES	48	FAM181B (ENSUPAG00010011665)	TENM4 (ENSUPAG00010011689) #7	NARS2 (ENSUPAG00010011853) #8	GAB2 (ENSUPAG00010011896) #9	USP35 (ENSUPAG00010011912) #10	KCTD21 (ENSUPAG00010011947) #11	ALG8 (ENSUPAG00010011952) #12	NDUFC2 (ENSUPAG00010011983) #13	THRSP (ENSUPAG00010011995) #14	KCTD14 (ENSUPAG00010012000) #16	INTS4 (ENSUPAG00010012011) #17	AAMDC (ENSUPAG00010012036) #18	RSF1 (ENSUPAG00010012048) #19	ENSUPAG00010012077 #21	AQP11 (ENSUPAG00010012087) #20	PAK1 (ENSUPAG00010012099) #22	GDPD4 (ENSUPAG00010012115) #23	MYO7A (ENSUPAG00010012134) #24	CAPN5 (ENSUPAG00010012806) #26	ACER3 (ENSUPAG00010012835) #28	B3GNT6 (ENSUPAG00010012889) #27	TSKU (ENSUPAG00010012903) #29	ENSUPAG00010012917	LRRC32 (ENSUPAG00010012993) #30	ENSUPAG00010013002	EMSY (ENSUPAG00010013019) #31	GVQW3 (ENSUPAG00010013303) #32	ENSUPAG00010013311 ##33	THAP12 (ENSUPAG00010013320) #33	WNT11 (ENSUPAG00010013326) #34	UVRAG (ENSUPAG00010013333) #35
Squirrel	MODERN SPECIES	98	TENM4 (ENSSTOG00000020637) #7	NARS2 (ENSSTOG00000019758) #8	GAB2 (ENSSTOG00000003173) #9	USP35 (ENSSTOG00000019692) #10	KCTD21 (ENSSTOG00000022775) #11	ALG8 (ENSSTOG00000008108) #12	NDUFC2 (ENSSTOG00000008104) #13	THRSP (ENSSTOG00000023796) #14	KCTD14 (ENSSTOG00000031614) #16	INTS4 (ENSSTOG00000023096) #17	AAMDC (ENSSTOG00000012329) #18	RSF1 (ENSSTOG00000004021) #19	ENSSTOG00000009982	ENSSTOG00000027980 #21	ENSSTOG00000004006 #20	PAK1 (ENSSTOG00000012786) #22	ENSSTOG00000034844	GDPD4 (ENSSTOG00000002750) #23	MYO7A (ENSSTOG00000002703) #24	CAPN5 (ENSSTOG00000022877) #26	B3GNT6 (ENSSTOG00000027714) #27	ACER3 (ENSSTOG00000002656) #28	TSKU (ENSSTOG00000021957) #29	ENSSTOG00000023620	LRRC32 (ENSSTOG00000007128) #30	ENSSTOG00000027244	EMSY (ENSSTOG00000001193) #31	WNT11 (ENSSTOG00000029064) #34	UVRAG (ENSSTOG00000016316) #35	DGAT2 (ENSSTOG00000012018) #36	MOGAT2 (ENSSTOG00000012010) #37
Alpin marmot	MODERN SPECIES	3	TENM4 (ENSMMMG00000006609) #7	NARS2 (ENSMMMG00000006830) #8	ENSMMMG00000006848	GAB2 (ENSMMMG00000006851) #9	ENSMMMG00000006859 #10	KCTD21 (ENSMMMG00000006872) #11	ALG8 (ENSMMMG00000006888) #12	NDUFC2 (ENSMMMG00000006915) #13	THRSP (ENSMMMG00000006924) #14	KCTD14 (ENSMMMG00000006927) #16	INTS4 (ENSMMMG00000006934) #17	ENSMMMG00000006961 #18	RSF1 (ENSMMMG00000006970) #19	CLNS1A (ENSMMMG00000007023) #21	AQP11 (ENSMMMG00000007031) #20	PAK1 (ENSMMMG00000007056) #22	ENSMMMG00000008545	GDPD4 (ENSMMMG00000008571) #23	MYO7A (ENSMMMG00000008595) #24	CAPN5 (ENSMMMG00000009202) #26	B3GNT6 (ENSMMMG00000009247) #27	ACER3 (ENSMMMG00000009260) #28	TSKU (ENSMMMG00000009316) #29	ENSMMMG00000009326	LRRC32 (ENSMMMG00000009408) #30	EMSY (ENSMMMG00000009455) #31	GVQW3 (ENSMMMG00000009582) #32	WNT11 (ENSMMMG00000009631) #34	UVRAG (ENSMMMG00000009669) #35	DGAT2 (ENSMMMG00000009694) #36	MOGAT2 (ENSMMMG00000009708) #37
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005015001	NARS2 (ENSSVLG00005014874) #8	GAB2 (ENSSVLG00005014816) #9	USP35 (ENSSVLG00005014736) #10	KCTD21 (ENSSVLG00005014693) #11	ALG8 (ENSSVLG00005014631) #12	NDUFC2 (ENSSVLG00005014553) #13	THRSP (ENSSVLG00005014533) #14	ENSSVLG00005014498 #16	ENSSVLG00005014481	INTS4 (ENSSVLG00005014058) #17	AAMDC (ENSSVLG00005013937) #18	RSF1 (ENSSVLG00005013858) #19	CLNS1A (ENSSVLG00005013729) #21	AQP11 (ENSSVLG00005013502) #20	PAK1 (ENSSVLG00005013431) #22	ENSSVLG00005013294	GDPD4 (ENSSVLG00005013184) #23	MYO7A (ENSSVLG00005012423) #24	CAPN5 (ENSSVLG00005012247) #26	B3GNT6 (ENSSVLG00005012209) #27	ACER3 (ENSSVLG00005023904) #28	TSKU (ENSSVLG00005023871) #29	ENSSVLG00005023846	ENSSVLG00005023498	LRRC32 (ENSSVLG00005023371) #30	EMSY (ENSSVLG00005023093) #31	GVQW3 (ENSSVLG00005022970) #32	THAP12 (ENSSVLG00005022917) #33	WNT11 (ENSSVLG00005022863) #34	UVRAG (ENSSVLG00005022785) #35
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000003188	GAB2 (ENSHGLG00000002641) #9	USP35 (ENSHGLG00000019526) #10	KCTD21 (ENSHGLG00000032398) #11	ALG8 (ENSHGLG00000019304) #12	NDUFC2 (ENSHGLG00000042879) #13	THRSP (ENSHGLG00000013110) #14	ENSHGLG00000018875	ENSHGLG00000041450 #16	ENSHGLG00000019142 #16	ENSHGLG00000005234 #17	AAMDC (ENSHGLG00000003585) #18	RSF1 (ENSHGLG00000002695) #19	ENSHGLG00000002326 #21	AQP11 (ENSHGLG00000003550) #20	PAK1 (ENSHGLG00000046220) #22	ENSHGLG00000019999	GDPD4 (ENSHGLG00000003760) #23	MYO7A (ENSHGLG00000011345) #24	CAPN5 (ENSHGLG00000002816) #26	OMP (ENSHGLG00000046318) #25	ENSHGLG00000037392 #27	ACER3 (ENSHGLG00000010087) #28	ENSHGLG00000017959	ENSHGLG00000007972	ENSHGLG00000043666	ENSHGLG00000046387	ENSHGLG00000040669	ENSHGLG00000046732	ENSHGLG00000019448 #29	ENSHGLG00000019386
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Guinea pig	MODERN SPECIES	40	PRCP (ENSCPOG00000030619)	TENM4 (ENSCPOG00000002931) #7	NARS2 (ENSCPOG00000002639) #8	GAB2 (ENSCPOG00000012380) #9	USP35 (ENSCPOG00000021879) #10	KCTD21 (ENSCPOG00000000382) #11	ALG8 (ENSCPOG00000012398) #12	NDUFC2 (ENSCPOG00000012395) #13	THRSP (ENSCPOG00000012393) #14	KCTD14 (ENSCPOG00000037873) #16	INTS4 (ENSCPOG00000012466) #17	AAMDC (ENSCPOG00000004417) #18	RSF1 (ENSCPOG00000005261) #19	CLNS1A (ENSCPOG00000005260) #21	AQP11 (ENSCPOG00000005258) #20	PAK1 (ENSCPOG00000000164) #22	GDPD4 (ENSCPOG00000008503) #23	MYO7A (ENSCPOG00000026904) #24	CAPN5 (ENSCPOG00000004296) #26	B3GNT6 (ENSCPOG00000040405) #27	ACER3 (ENSCPOG00000036907) #28	TSKU (ENSCPOG00000036466) #29	ENSCPOG00000000712	LRRC32 (ENSCPOG00000004677) #30	EMSY (ENSCPOG00000010198) #31	THAP12 (ENSCPOG00000013167) #33	WNT11 (ENSCPOG00000009182) #34	UVRAG (ENSCPOG00000010164) #35	DGAT2 (ENSCPOG00000004409) #36	MOGAT2 (ENSCPOG00000037142) #37
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT00940000158099	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b.t #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Long-tailed chinchilla	MODERN SPECIES	121	ENSCLAG00000015167	TENM4 (ENSCLAG00000013721) #7	NARS2 (ENSCLAG00000012233) #8	ENSCLAG00000013569	GAB2 (ENSCLAG00000015175) #9	USP35 (ENSCLAG00000015220) #10	KCTD21 (ENSCLAG00000015125) #11	ENSCLAG00000013655	ALG8 (ENSCLAG00000014914) #12	NDUFC2 (ENSCLAG00000016641) #13	INTS4 (ENSCLAG00000015884) #17	AAMDC (ENSCLAG00000013898) #18	RSF1 (ENSCLAG00000014769) #19	CLNS1A (ENSCLAG00000014638) #21	AQP11 (ENSCLAG00000016580) #20	PAK1 (ENSCLAG00000013320) #22	GDPD4 (ENSCLAG00000016359) #23	MYO7A (ENSCLAG00000013818) #24	CAPN5 (ENSCLAG00000016170) #26	B3GNT6 (ENSCLAG00000018076) #27	ACER3 (ENSCLAG00000014899) #28	ENSCLAG00000015013	TSKU (ENSCLAG00000016143) #29	ENSCLAG00000014932	LRRC32 (ENSCLAG00000016535) #30	EMSY (ENSCLAG00000015699) #31	THAP12 (ENSCLAG00000014847) #33	WNT11 (ENSCLAG00000014333) #34	UVRAG (ENSCLAG00000016075) #35	DGAT2 (ENSCLAG00000015138) #36	ENSCLAG00000015204
Degu	MODERN SPECIES	90	ENSODEG00000019138	TENM4 (ENSODEG00000004981) #7	NARS2 (ENSODEG00000004856) #8	ENSODEG00000019084	GAB2 (ENSODEG00000004754) #9	USP35 (ENSODEG00000004671) #10	KCTD21 (ENSODEG00000004645) #11	ALG8 (ENSODEG00000004601) #12	NDUFC2 (ENSODEG00000004580) #13	ENSODEG00000004566	INTS4 (ENSODEG00000004555) #17	AAMDC (ENSODEG00000004504) #18	RSF1 (ENSODEG00000004471) #19	ENSODEG00000004427 #21	AQP11 (ENSODEG00000004417) #20	PAK1 (ENSODEG00000004405) #22	ENSODEG00000004389	GDPD4 (ENSODEG00000004342) #23	MYO7A (ENSODEG00000004096) #24	CAPN5 (ENSODEG00000005118) #26	B3GNT6 (ENSODEG00000005108) #27	ENSODEG00000005077	ENSODEG00000005063	ACER3 (ENSODEG00000005051) #28	PGM2L1 (ENSODEG00000004995)	KCNE3 (ENSODEG00000019113)	LIPT2 (ENSODEG00000004972)	ENSODEG00000019096	ENSODEG00000004965	POLD3 (ENSODEG00000004735)	CHRDL2 (ENSODEG00000004877)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182988.a.b.a #22
Hedgehog	MODERN SPECIES	4536																PAK1 (ENSEEUG00000006111) #22
Common shrew	MODERN SPECIES	3484																PAK1 (ENSSARG00000003580) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Suina	ANCESTRAL SPECIES	5	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128.n #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Chacoan peccary	MODERN SPECIES	32	ENSCWAG00000000452	NARS2 (ENSCWAG00000000469) #8	GAB2 (ENSCWAG00000000513) #9	USP35 (ENSCWAG00000000554) #10	KCTD21 (ENSCWAG00000000591) #11	ENSCWAG00000000598	ALG8 (ENSCWAG00000000606) #12	NDUFC2 (ENSCWAG00000000628) #13	THRSP (ENSCWAG00000000643) #14	KCTD14 (ENSCWAG00000000654) #16	INTS4 (ENSCWAG00000000693) #17	AAMDC (ENSCWAG00000000780) #18	RSF1 (ENSCWAG00000000803) #19	CLNS1A (ENSCWAG00000000875) #21	AQP11 (ENSCWAG00000000925) #20	PAK1 (ENSCWAG00000000943) #22	ENSCWAG00000000976 #23	ENSCWAG00000001004 #23	MYO7A (ENSCWAG00000001099) #24	CAPN5 (ENSCWAG00000001339) #26	B3GNT6 (ENSCWAG00000001354) #27	ACER3 (ENSCWAG00000001370) #28	TSKU (ENSCWAG00000001407) #29	ENSCWAG00000001431	LRRC32 (ENSCWAG00000001490) #30	EMSY (ENSCWAG00000001547) #31	GVQW3 (ENSCWAG00000001671) #32	THAP12 (ENSCWAG00000001677) #33	WNT11 (ENSCWAG00000001687) #34	UVRAG (ENSCWAG00000001705) #35	DGAT2 (ENSCWAG00000001740) #36
Pig	MODERN SPECIES	17	NARS2 (ENSSSCG00000014893) #8	ENSSSCG00000048333	GAB2 (ENSSSCG00000014891) #9	USP35 (ENSSSCG00000014892) #10	ENSSSCG00000042960	KCTD21 (ENSSSCG00000033506) #11	ALG8 (ENSSSCG00000014887) #12	NDUFC2 (ENSSSCG00000039494) #13	THRSP (ENSSSCG00000033822) #14	ENSSSCG00000031979 #16	ENSSSCG00000014884 #17	ENSSSCG00000037251 #18	RSF1 (ENSSSCG00000014882) #19	CLNS1A (ENSSSCG00000014881) #21	AQP11 (ENSSSCG00000014880) #20	PAK1 (ENSSSCG00000014878) #22	ENSSSCG00000055558 #23	ENSSSCG00000058608 #23	ENSSSCG00000053774	ENSSSCG00000014877 #23	MYO7A (ENSSSCG00000014876) #24	CAPN5 (ENSSSCG00000014875) #26	B3GNT6 (ENSSSCG00000014874) #27	ENSSSCG00000053515	ACER3 (ENSSSCG00000032723) #28	ENSSSCG00000014872	TSKU (ENSSSCG00000014871) #29	ENSSSCG00000055915	LRRC32 (ENSSSCG00000014869) #30	EMSY (ENSSSCG00000014868) #31	GVQW3 (ENSSSCG00000062483) #32
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Pecora	ANCESTRAL SPECIES	13	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00940000156251.f.e.a #23	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00950000182989.D.a.a.g.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184
Percora_a	ANCESTRAL SPECIES	16	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00940000156251.f.e.a #23	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00950000182989.D.a.a.g.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00390000016904.a.b	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00940000156251.f.e.a #23	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A.rc	ENSGT00810000125439.A.qc.a	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184
Caprinae	ANCESTRAL SPECIES	29	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00390000016904.a.b	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00940000156251.f.e.a #23	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A.qc.a	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00390000016292.i.b
Goat	MODERN SPECIES	21	USP35 (ENSCHIG00000022000) #10	KCTD21 (ENSCHIG00000010283) #11	ENSCHIG00000012136	ALG8 (ENSCHIG00000015388) #12	NDUFC2 (ENSCHIG00000024981) #13	THRSP (ENSCHIG00000010391) #14	KCTD14 (ENSCHIG00000010510) #16	INTS4 (ENSCHIG00000016677) #17	AAMDC (ENSCHIG00000016553) #18	RSF1 (ENSCHIG00000024983) #19	ENSCHIG00000014742	CLNS1A (ENSCHIG00000022408) #21	AQP11 (ENSCHIG00000013621) #20	ENSCHIG00000008822	ENSCHIG00000020809	PAK1 (ENSCHIG00000003071) #22	ENSCHIG00000012938 #23	ENSCHIG00000012289 #23	ENSCHIG00000011542 #23	ENSCHIG00000018981	ENSCHIG00000026019	ENSCHIG00000012126	SVIP (ENSCHIG00000018647)	GAS2 (ENSCHIG00000024172)	FANCF (ENSCHIG00000007412)	SLC17A6 (ENSCHIG00000018728)	ANO5 (ENSCHIG00000009295)	NELL1 (ENSCHIG00000022956)	SLC6A5 (ENSCHIG00000012442)	PRMT3 (ENSCHIG00000016465)	HTATIP2 (ENSCHIG00000024838)
Rambouillet Sheep	MODERN SPECIES	13	USP35 (ENSOARG00020025158) #10	KCTD21 (ENSOARG00020025178) #11	ENSOARG00020025186	ENSOARG00020025198	ALG8 (ENSOARG00020025204) #12	NDUFC2 (ENSOARG00020025217) #13	THRSP (ENSOARG00020025234) #14	KCTD14 (ENSOARG00020025241) #16	INTS4 (ENSOARG00020025265) #17	AAMDC (ENSOARG00020025329) #18	RSF1 (ENSOARG00020025337) #19	ENSOARG00020025348	CLNS1A (ENSOARG00020025356) #21	AQP11 (ENSOARG00020025375) #20	ENSOARG00020025384	PAK1 (ENSOARG00020025388) #22	ENSOARG00020025417 #23	ENSOARG00020025490 #23	ENSOARG00020025509 #23	LUZP2 (ENSOARG00020025537)	ENSOARG00020025562	ENSOARG00020025569	NELL1 (ENSOARG00020025588)	SLC6A5 (ENSOARG00020025638)	PRMT3 (ENSOARG00020025645)	HTATIP2 (ENSOARG00020025666)	ENSOARG00020025672	ENSOARG00020025676	ENSOARG00020025682	DBX1 (ENSOARG00020025685)	NAV2 (ENSOARG00020025736)
Bovinae	ANCESTRAL SPECIES	27	ENSGT00940000160942 #10	ENSGT00390000002918.a.a.j.c.a	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00390000016904.a.b	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A.rc	ENSGT00810000125439.A.qc.a	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00390000016292.i.b
Bos	ANCESTRAL SPECIES	11	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000002918.a.a.j.c.a.a.a	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00390000016904.a.b	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00390000007015.q.b	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755.f	ENSGT00940000155755.e.a	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A.rc	ENSGT00810000125439.A.qc.a	ENSGT00940000154963	ENSGT00940000156825
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000002918.a.a.j.c.a.a.a	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00390000016904.a.b	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00390000007015.q.b	ENSGT00390000013180	ENSGT00970000198347	ENSGT00660000097475	ENSGT00390000007067.c	ENSGT00940000155755.f	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692	ENSGT00810000125439.A.rc	ENSGT00810000125439.A.qc.a	ENSGT00940000154963	ENSGT00940000156825
Cow	MODERN SPECIES	21	ENSBTAG00000051637	KCTD21 (ENSBTAG00000054429) #11	ENSBTAG00000045601	ALG8 (ENSBTAG00000018192) #12	NDUFC2 (ENSBTAG00000018188) #13	THRSP (ENSBTAG00000011666) #14	KCTD14 (ENSBTAG00000011668) #16	INTS4 (ENSBTAG00000010505) #17	AAMDC (ENSBTAG00000017298) #18	RSF1 (ENSBTAG00000020268) #19	ENSBTAG00000049245	ENSBTAG00000051290	CLNS1A (ENSBTAG00000019930) #21	AQP11 (ENSBTAG00000019928) #20	ENSBTAG00000009268	PAK1 (ENSBTAG00000010191) #22	ENSBTAG00000000886 #23	ENSBTAG00000034536 #23	LUZP2 (ENSBTAG00000001043)	ENSBTAG00000053211	ENSBTAG00000054222	GAS2 (ENSBTAG00000021654)	FANCF (ENSBTAG00000007230)	SLC17A6 (ENSBTAG00000038347)	ANO5 (ENSBTAG00000019394)	ENSBTAG00000050228	ENSBTAG00000048576	SLC6A5 (ENSBTAG00000014300)	PRMT3 (ENSBTAG00000013421)	HTATIP2 (ENSBTAG00000013419)	ENSBTAG00000008684
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005003394	KCTD21 (ENSBIXG00005007835) #11	ENSBIXG00005007674	ALG8 (ENSBIXG00005020344) #12	THRSP (ENSBIXG00005020366) #14	ENSBIXG00005020379 #13	KCTD14 (ENSBIXG00005020393) #16	INTS4 (ENSBIXG00005020611) #17	AAMDC (ENSBIXG00005020691) #18	ENSBIXG00005007728	ENSBIXG00005020733	RSF1 (ENSBIXG00005003521) #19	CLNS1A (ENSBIXG00005020933) #21	AQP11 (ENSBIXG00005020997) #20	ENSBIXG00005021010	PAK1 (ENSBIXG00005021064) #22	ENSBIXG00005021277 #23	ENSBIXG00005021308	ENSBIXG00005021330 #23	LUZP2 (ENSBIXG00005003622)	ENSBIXG00005006604	CCDC179 (ENSBIXG00005021565)	ENSBIXG00005000008	GAS2 (ENSBIXG00005021605)	FANCF (ENSBIXG00005021632)	SLC17A6 (ENSBIXG00005021666)	ANO5 (ENSBIXG00005021754)	NELL1 (ENSBIXG00005021911)	SLC6A5 (ENSBIXG00005006663)	PRMT3 (ENSBIXG00005022211)	ENSBIXG00005022254
Bos_a	ANCESTRAL SPECIES	66	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00390000016904.a.b	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000156251.f.f #23	ENSGT00390000007015.q.b
Domestic yak	MODERN SPECIES	21	GAB2 (ENSBGRG00000020464) #9	ENSBGRG00000020442	USP35 (ENSBGRG00000020391) #10	KCTD21 (ENSBGRG00000020357) #11	ALG8 (ENSBGRG00000020232) #12	NDUFC2 (ENSBGRG00000020103) #13	THRSP (ENSBGRG00000020064) #14	KCTD14 (ENSBGRG00000020044) #16	INTS4 (ENSBGRG00000019630) #17	AAMDC (ENSBGRG00000019457) #18	ENSBGRG00000019411	RSF1 (ENSBGRG00000019124) #19	CLNS1A (ENSBGRG00000018759) #21	AQP11 (ENSBGRG00000018686) #20	ENSBGRG00000018633	PAK1 (ENSBGRG00000018531) #22	ENSBGRG00000018068 #23	ENSBGRG00000017769 #23	ENSBGRG00000017741	ENSBGRG00000017635	ENSBGRG00000017480	ENSBGRG00000017317	ENSBGRG00000017300	ENSBGRG00000017237	OR8D4 (ENSBGRG00000017223)	ENSBGRG00000024380	ENSBGRG00000024364	OR10S1 (ENSBGRG00000024345)	OR10G6 (ENSBGRG00000024329)	ENSBGRG00000024323	ENSBGRG00000024294
Wild yak	MODERN SPECIES	2457															ENSBMUG00000023575	PAK1 (ENSBMUG00000023592) #22
American bison	MODERN SPECIES	3238	USP35 (ENSBBBG00000019234) #10	ENSBBBG00000019225	KCTD21 (ENSBBBG00000008170) #11	ENSBBBG00000004952	ALG8 (ENSBBBG00000007272) #12	NDUFC2 (ENSBBBG00000019182) #13	KCTD14 (ENSBBBG00000019169) #16	INTS4 (ENSBBBG00000019159) #17	ENSBBBG00000004915	AAMDC (ENSBBBG00000004908) #18	RSF1 (ENSBBBG00000004893) #19	ENSBBBG00000019059	CLNS1A (ENSBBBG00000019050) #21	AQP11 (ENSBBBG00000018990) #20	ENSBBBG00000018987	PAK1 (ENSBBBG00000018980) #22	ENSBBBG00000018951 #23	ENSBBBG00000018916 #23	ENSBBBG00000007625
Siberian musk deer	MODERN SPECIES	113	GAB2 (ENSMMSG00000004659) #9	USP35 (ENSMMSG00000004718) #10	KCTD21 (ENSMMSG00000004784) #11	ENSMMSG00000004807	ALG8 (ENSMMSG00000004825) #12	NDUFC2 (ENSMMSG00000004904) #13	THRSP (ENSMMSG00000004930) #14	KCTD14 (ENSMMSG00000004944) #16	INTS4 (ENSMMSG00000004977) #17	AAMDC (ENSMMSG00000005194) #18	RSF1 (ENSMMSG00000005280) #19	ENSMMSG00000005371 #21	AQP11 (ENSMMSG00000005614) #20	ENSMMSG00000005636	ENSMMSG00000005665	PAK1 (ENSMMSG00000005702) #22	GDPD4 (ENSMMSG00000005765) #23
Yarkand deer	MODERN SPECIES	11	ENSCHYG00000003661	GAB2 (ENSCHYG00000003673) #9	USP35 (ENSCHYG00000003699) #10	KCTD21 (ENSCHYG00000003720) #11	ENSCHYG00000003733	ALG8 (ENSCHYG00000003751) #12	NDUFC2 (ENSCHYG00000003780) #13	THRSP (ENSCHYG00000003785) #14	KCTD14 (ENSCHYG00000003792) #16	INTS4 (ENSCHYG00000003807) #17	ENSCHYG00000003859	ENSCHYG00000003886 #18	RSF1 (ENSCHYG00000003899) #19	CLNS1A (ENSCHYG00000003949) #21	AQP11 (ENSCHYG00000003991) #20	PAK1 (ENSCHYG00000004009) #22	ENSCHYG00000004057 #23	ENSCHYG00000008843 #23	ENSCHYG00000009058 #23	ENSCHYG00000009185	ENSCHYG00000009321	ENSCHYG00000009355	CCDC179 (ENSCHYG00000009380)	ENSCHYG00000009425	GAS2 (ENSCHYG00000009479)	FANCF (ENSCHYG00000009636)	SLC17A6 (ENSCHYG00000009689)	ANO5 (ENSCHYG00000009862)	ENSCHYG00000010427	NELL1 (ENSCHYG00000010475)	SLC6A5 (ENSCHYG00000010711)
Cetacea	ANCESTRAL SPECIES	4	ENSGT00980000198692	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Blue whale	MODERN SPECIES	19	FAM181B (ENSBMSG00010005075)	ENSBMSG00010005082	TENM4 (ENSBMSG00010005114) #7	NARS2 (ENSBMSG00010005167) #8	GAB2 (ENSBMSG00010005186) #9	USP35 (ENSBMSG00010005214) #10	KCTD21 (ENSBMSG00010005236) #11	ALG8 (ENSBMSG00010005254) #12	NDUFC2 (ENSBMSG00010005272) #13	KCTD14 (ENSBMSG00010005287) #16	INTS4 (ENSBMSG00010005324) #17	ENSBMSG00010005359 #18	RSF1 (ENSBMSG00010005407) #19	CLNS1A (ENSBMSG00010005431) #21	AQP11 (ENSBMSG00010005455) #20	PAK1 (ENSBMSG00010005469) #22	GDPD4 (ENSBMSG00010005481) #23	MYO7A (ENSBMSG00010005524) #24	CAPN5 (ENSBMSG00010005617) #26	ACER3 (ENSBMSG00010005659) #28	TSKU (ENSBMSG00010005685) #29	ENSBMSG00010005705	LRRC32 (ENSBMSG00010005727) #30	EMSY (ENSBMSG00010005898) #31	GVQW3 (ENSBMSG00010006350) #32	THAP12 (ENSBMSG00010006359) #33	WNT11 (ENSBMSG00010006371) #34	UVRAG (ENSBMSG00010006403) #35	DGAT2 (ENSBMSG00010006424) #36	MOGAT2 (ENSBMSG00010006441) #37	MAP6 (ENSBMSG00010006468)
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00980000198692	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.e #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	7	TENM4 (ENSPCTG00005010687) #7	NARS2 (ENSPCTG00005010794) #8	GAB2 (ENSPCTG00005010907) #9	USP35 (ENSPCTG00005010965) #10	KCTD21 (ENSPCTG00005011096) #11	ALG8 (ENSPCTG00005011136) #12	NDUFC2 (ENSPCTG00005011217) #13	KCTD14 (ENSPCTG00005011283) #16	INTS4 (ENSPCTG00005011313) #17	ENSPCTG00005011813	ENSPCTG00005011852 #18	ENSPCTG00005011994	RSF1 (ENSPCTG00005012040) #19	CLNS1A (ENSPCTG00005012102) #21	AQP11 (ENSPCTG00005012243) #20	PAK1 (ENSPCTG00005008855) #22	GDPD4 (ENSPCTG00005008885) #23	MYO7A (ENSPCTG00005009160) #24	CAPN5 (ENSPCTG00005010782) #26	ACER3 (ENSPCTG00005010914) #28	TSKU (ENSPCTG00005011078) #29	LRRC32 (ENSPCTG00005011094) #30	EMSY (ENSPCTG00005011180) #31	GVQW3 (ENSPCTG00005011668) #32	ENSPCTG00005011685 #33	WNT11 (ENSPCTG00005011701) #34	UVRAG (ENSPCTG00005011757) #35	ENSPCTG00005011854	DGAT2 (ENSPCTG00005011874) #36	MOGAT2 (ENSPCTG00005012047) #37	ENSPCTG00005012145
Sperm whale	MODERN SPECIES	10	C22orf31 (ENSPCTG00005006661)	KREMEN1 (ENSPCTG00005006568)	EMID1 (ENSPCTG00005006308)	RHBDD3 (ENSPCTG00005006213)	NEFH (ENSPCTG00005006128)	THOC5 (ENSPCTG00005005997)	NIPSNAP1 (ENSPCTG00005005945)	NF2 (ENSPCTG00005005917)	CABP7 (ENSPCTG00005005877)	ZMAT5 (ENSPCTG00005005853)	ENSPCTG00005005837	ASCC2 (ENSPCTG00005005539)	ENSPCTG00005005453	ENSPCTG00005005436	ENSPCTG00005005414	ENSPCTG00005005391 #22	LIF (ENSPCTG00005005366)	OSM (ENSPCTG00005005339)	CASTOR1 (ENSPCTG00005005294)	TBC1D10A (ENSPCTG00005005227)	SF3A1 (ENSPCTG00005005169)	ENSPCTG00005005142	MTFP1 (ENSPCTG00005005096)	ENSPCTG00005005062	GAL3ST1 (ENSPCTG00005005038)	PES1 (ENSPCTG00005004967)	TCN2 (ENSPCTG00005004928)	SLC35E4 (ENSPCTG00005004906)	DUSP18 (ENSPCTG00005004889)	ENSPCTG00005004857	OSBP2 (ENSPCTG00005004791)
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00980000198692	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352.q #13	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958.i.a #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT01010000227694
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01010000228968	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352.q #13	ENSGT00940000160762 #16	ENSGT00950000183087.A.b.b.j	ENSGT00940000168561	ENSGT00390000010128 #17	ENSGT00390000011958.i.a #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT01010000227694
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01010000228968	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352.q #13	ENSGT00940000160762 #16	ENSGT00950000183087.A.b.b.j	ENSGT00390000003860.cb.b	ENSGT00390000010128 #17	ENSGT00390000011958.i.a #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT01010000227694
Beluga whale	MODERN SPECIES	2	ENSDLEG00000004540	TENM4 (ENSDLEG00000004417) #7	NARS2 (ENSDLEG00000004391) #8	GAB2 (ENSDLEG00000004384) #9	USP35 (ENSDLEG00000004381) #10	KCTD21 (ENSDLEG00000004374) #11	ALG8 (ENSDLEG00000004365) #12	ENSDLEG00000004361 #13	KCTD14 (ENSDLEG00000004354) #16	ENSDLEG00000004342	INTS4 (ENSDLEG00000004326) #17	AAMDC (ENSDLEG00000004318) #18	RSF1 (ENSDLEG00000004307) #19	CLNS1A (ENSDLEG00000004301) #21	AQP11 (ENSDLEG00000004294) #20	PAK1 (ENSDLEG00000004277) #22	MYO7A (ENSDLEG00000003449) #24	CAPN5 (ENSDLEG00000003342) #26	ACER3 (ENSDLEG00000003334) #28	TSKU (ENSDLEG00000003327) #29	ENSDLEG00000003321	ENSDLEG00000003313	LRRC32 (ENSDLEG00000003305) #30	EMSY (ENSDLEG00000003214) #31	GVQW3 (ENSDLEG00000003193) #32	THAP12 (ENSDLEG00000003173) #33	WNT11 (ENSDLEG00000003165) #34	LSM4 (ENSDLEG00000003159)	DGAT2 (ENSDLEG00000003119) #35	MOGAT2 (ENSDLEG00000003103) #37	ENSDLEG00000003098
Narwhal	MODERN SPECIES	314	ENSMMNG00015017594	NARS2 (ENSMMNG00015017636) #8	GAB2 (ENSMMNG00015017697) #9	USP35 (ENSMMNG00015017738) #10	KCTD21 (ENSMMNG00015017806) #11	ALG8 (ENSMMNG00015017839) #12	ENSMMNG00015017877 #13	KCTD14 (ENSMMNG00015017911) #16	INTS4 (ENSMMNG00015018001) #17	ENSMMNG00015018307	ENSMMNG00015018333 #18	ENSMMNG00015018363	RSF1 (ENSMMNG00015018385) #19	CLNS1A (ENSMMNG00015018424) #21	AQP11 (ENSMMNG00015018453) #20	PAK1 (ENSMMNG00015018474) #22	MYO7A (ENSMMNG00015018569) #24	CAPN5 (ENSMMNG00015018893) #26	ACER3 (ENSMMNG00015018948) #28	TSKU (ENSMMNG00015018998) #29	ENSMMNG00015019014	LRRC32 (ENSMMNG00015019035) #30	EMSY (ENSMMNG00015019155) #31	GVQW3 (ENSMMNG00015019432) #32	ENSMMNG00015019441 #33	WNT11 (ENSMMNG00015019462) #34	UVRAG (ENSMMNG00015019516) #35	LSM4 (ENSMMNG00015019548)	DGAT2 (ENSMMNG00015019561) #36	MOGAT2 (ENSMMNG00015019582) #37	ENSMMNG00015019612
Vaquita	MODERN SPECIES	19	ENSPSNG00000004054	NARS2 (ENSPSNG00000004074) #8	GAB2 (ENSPSNG00000004098) #9	USP35 (ENSPSNG00000004108) #10	KCTD21 (ENSPSNG00000004126) #11	ALG8 (ENSPSNG00000004160) #12	ENSPSNG00000004194 #13	KCTD14 (ENSPSNG00000004214) #16	INTS4 (ENSPSNG00000004296) #17	ENSPSNG00000004436	ENSPSNG00000004460 #18	ENSPSNG00000004492	RSF1 (ENSPSNG00000004527) #19	CLNS1A (ENSPSNG00000004596) #21	AQP11 (ENSPSNG00000004655) #20	PAK1 (ENSPSNG00000004688) #22	MYO7A (ENSPSNG00000004811) #24	CAPN5 (ENSPSNG00000005069) #26	ACER3 (ENSPSNG00000005102) #28	TSKU (ENSPSNG00000005155) #29	ENSPSNG00000005176	ENSPSNG00000005198	LRRC32 (ENSPSNG00000005215) #30	EMSY (ENSPSNG00000005336) #31	GVQW3 (ENSPSNG00000005560) #32	ENSPSNG00000005572 #33	WNT11 (ENSPSNG00000005604) #34	UVRAG (ENSPSNG00000005649) #35	LSM4 (ENSPSNG00000005672)	DGAT2 (ENSPSNG00000005697) #36	MOGAT2 (ENSPSNG00000005741) #37
Dolphin	MODERN SPECIES	998																PAK1 (ENSTTRG00000008763) #22
Camelidae	ANCESTRAL SPECIES	32	ENSGT00940000158099	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.f #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT00970000197259
Arabian camel	MODERN SPECIES	1	PRCP (ENSCDRG00005000165)	TENM4 (ENSCDRG00005005968) #7	NARS2 (ENSCDRG00005005899) #8	GAB2 (ENSCDRG00005005876) #9	USP35 (ENSCDRG00005005740) #10	KCTD21 (ENSCDRG00005005709) #11	ALG8 (ENSCDRG00005005652) #12	NDUFC2 (ENSCDRG00005005626) #13	THRSP (ENSCDRG00005005606) #14	KCTD14 (ENSCDRG00005005593) #16	INTS4 (ENSCDRG00005005479) #17	AAMDC (ENSCDRG00005005416) #18	RSF1 (ENSCDRG00005005378) #19	CLNS1A (ENSCDRG00005005266) #21	AQP11 (ENSCDRG00005005237) #20	PAK1 (ENSCDRG00005005198) #22	GDPD4 (ENSCDRG00005005146) #23	MYO7A (ENSCDRG00005005065) #24	CAPN5 (ENSCDRG00005005010) #26	B3GNT6 (ENSCDRG00005004982) #27	ACER3 (ENSCDRG00005004836) #28	TSKU (ENSCDRG00005004808) #29	ENSCDRG00005004792	ENSCDRG00005004762	LRRC32 (ENSCDRG00005004741) #30	EMSY (ENSCDRG00005004068) #31	GVQW3 (ENSCDRG00005003950) #32	THAP12 (ENSCDRG00005003929) #33	WNT11 (ENSCDRG00005003887) #34	UVRAG (ENSCDRG00005003820) #35	DGAT2 (ENSCDRG00005003787) #36
Alpaca	MODERN SPECIES	2232											INTS4 (ENSVPAG00000010395) #17	AAMDC (ENSVPAG00000010394) #18	RSF1 (ENSVPAG00000010392) #19	CLNS1A (ENSVPAG00000010391) #21	AQP11 (ENSVPAG00000010390) #20	PAK1 (ENSVPAG00000010389) #22	ENSVPAG00000010388 #23
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Equus	ANCESTRAL SPECIES	15	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Donkey	MODERN SPECIES	12	TENM4 (ENSEASG00005012922) #7	NARS2 (ENSEASG00005013867) #8	GAB2 (ENSEASG00005013868) #9	USP35 (ENSEASG00005013870) #10	KCTD21 (ENSEASG00005026196) #11	ENSEASG00005013872	ALG8 (ENSEASG00005013874) #12	NDUFC2 (ENSEASG00005013875) #13	THRSP (ENSEASG00005035411) #14	KCTD14 (ENSEASG00005026841) #16	INTS4 (ENSEASG00005013878) #17	AAMDC (ENSEASG00005013879) #18	RSF1 (ENSEASG00005013881) #19	CLNS1A (ENSEASG00005013883) #21	AQP11 (ENSEASG00005013884) #20	PAK1 (ENSEASG00005013886) #22	ENSEASG00005013887 #23	MYO7A (ENSEASG00005013920) #24	CAPN5 (ENSEASG00005014205) #26	B3GNT6 (ENSEASG00005038371) #27	ENSEASG00005014209 #28	ENSEASG00005037031 #28	TSKU (ENSEASG00005028507) #29	ENSEASG00005014216	LRRC32 (ENSEASG00005014217) #30	EMSY (ENSEASG00005014219) #31	GVQW3 (ENSEASG00005026325) #32	THAP12 (ENSEASG00005014222) #33	WNT11 (ENSEASG00005014224) #34	UVRAG (ENSEASG00005014226) #35	ENSEASG00005014228 #36
Horse	MODERN SPECIES	28	TENM4 (ENSECAG00000008038) #7	GAB2 (ENSECAG00000020164) #9	USP35 (ENSECAG00000021733) #10	KCTD21 (ENSECAG00000038949) #11	KCTD21 (ENSECAG00000005835)	ALG8 (ENSECAG00000022682) #12	NDUFC2 (ENSECAG00000039611) #13	THRSP (ENSECAG00000055545) #14	INTS4 (ENSECAG00000002281) #17	AAMDC (ENSECAG00000010625) #18	ENSECAG00000050740 #17	RSF1 (ENSECAG00000010685) #19	ENSECAG00000045122	CLNS1A (ENSECAG00000015043) #21	AQP11 (ENSECAG00000017607) #20	PAK1 (ENSECAG00000017840) #22	GDPD4 (ENSECAG00000023157) #23	ENSECAG00000047740	MYO7A (ENSECAG00000024143) #24	CAPN5 (ENSECAG00000015125) #26	OMP (ENSECAG00000057103) #25	B3GNT6 (ENSECAG00000019463) #27	ACER3 (ENSECAG00000026842) #28	TSKU (ENSECAG00000005924) #29	ENSECAG00000038312	LRRC32 (ENSECAG00000019895) #30	EMSY (ENSECAG00000020064) #31	GVQW3 (ENSECAG00000046273) #32	THAP12 (ENSECAG00000021982) #33	WNT11 (ENSECAG00000022188) #34	UVRAG (ENSECAG00000023818) #35
Chiroptera	ANCESTRAL SPECIES	5	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Microbat	MODERN SPECIES	1023	NARS2 (ENSMLUG00000030064) #8	GAB2 (ENSMLUG00000015964) #9	USP35 (ENSMLUG00000015951) #10	KCTD21 (ENSMLUG00000014632) #11	ALG8 (ENSMLUG00000014622) #12	ENSMLUG00000014617 #13	THRSP (ENSMLUG00000014613) #14	KCTD14 (ENSMLUG00000014611) #16	INTS4 (ENSMLUG00000005683) #17	ENSMLUG00000025569	AAMDC (ENSMLUG00000005674) #18	ENSMLUG00000029974	RSF1 (ENSMLUG00000005657) #19	CLNS1A (ENSMLUG00000024623) #21	AQP11 (ENSMLUG00000009739) #20	PAK1 (ENSMLUG00000013311) #22	GDPD4 (ENSMLUG00000016657) #23	MYO7A (ENSMLUG00000016621) #24	CAPN5 (ENSMLUG00000001183) #26	TSKU (ENSMLUG00000001174) #29	ENSMLUG00000001171	LRRC32 (ENSMLUG00000010094) #30	EMSY (ENSMLUG00000012303) #31	ENSMLUG00000000564 #33	WNT11 (ENSMLUG00000016319) #34
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010021143	NARS2 (ENSRFEG00010021106) #8	GAB2 (ENSRFEG00010021071) #9	USP35 (ENSRFEG00010021047) #10	ENSRFEG00010021031 #11	ENSRFEG00010021023	ALG8 (ENSRFEG00010020987) #12	NDUFC2 (ENSRFEG00010020959) #13	THRSP (ENSRFEG00010020945) #14	KCTD14 (ENSRFEG00010020932) #16	INTS4 (ENSRFEG00010020849) #17	AAMDC (ENSRFEG00010020818) #18	RSF1 (ENSRFEG00010020771) #19	ENSRFEG00010020718 #21	AQP11 (ENSRFEG00010020682) #20	PAK1 (ENSRFEG00010020635) #22	GDPD4 (ENSRFEG00010020561) #23	MYO7A (ENSRFEG00010019800) #24	CAPN5 (ENSRFEG00010019733) #26	ACER3 (ENSRFEG00010019610) #28	TSKU (ENSRFEG00010019575) #29	LRRC32 (ENSRFEG00010019506) #30	EMSY (ENSRFEG00010019268) #31	GVQW3 (ENSRFEG00010019199) #32	THAP12 (ENSRFEG00010019170) #33	WNT11 (ENSRFEG00010019130) #34	ENSRFEG00010019083	ENSRFEG00010019042	UVRAG (ENSRFEG00010018929) #35	DGAT2 (ENSRFEG00010018775) #36	MOGAT2 (ENSRFEG00010018707) #37
Megabat	MODERN SPECIES	3242																PAK1 (ENSPVAG00000001150) #22	GDPD4 (ENSPVAG00000001149) #23	MYO7A (ENSPVAG00000001148) #24	CAPN5 (ENSPVAG00000001147) #26	ACER3 (ENSPVAG00000001146) #28
Carnivora	ANCESTRAL SPECIES	21	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Caniformia	ANCESTRAL SPECIES	17	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.c.b #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00940000166485.a	ENSGT00530000064411 #19	ENSGT00390000010063.c.b #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Ursidae	ANCESTRAL SPECIES	15	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00940000166485.a	ENSGT00530000064411 #19	ENSGT00940000165195	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Ursus	ANCESTRAL SPECIES	36	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00940000166485.a	ENSGT00530000064411 #19	ENSGT00940000165195	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
American black bear	MODERN SPECIES	1478																PAK1 (ENSUAMG00000006166) #22	GDPD4 (ENSUAMG00000006164) #23
Polar bear	MODERN SPECIES	302	NARS2 (ENSUMAG00000011459) #8	GAB2 (ENSUMAG00000011445) #9	ENSUMAG00000011439 #10	KCTD21 (ENSUMAG00000011431) #11	ENSUMAG00000011427	ENSUMAG00000011419 #12	ENSUMAG00000011409 #13	THRSP (ENSUMAG00000011404) #14	KCTD14 (ENSUMAG00000011398) #16	INTS4 (ENSUMAG00000011388) #17	AAMDC (ENSUMAG00000011384) #18	ENSUMAG00000011381	RSF1 (ENSUMAG00000011375) #19	ENSUMAG00000011366	AQP11 (ENSUMAG00000011361) #20	PAK1 (ENSUMAG00000011349) #22	GDPD4 (ENSUMAG00000011316) #23	MYO7A (ENSUMAG00000011108) #24	CAPN5 (ENSUMAG00000011009) #26	ACER3 (ENSUMAG00000010990) #28	ENSUMAG00000010978	ENSUMAG00000010965	ENSUMAG00000010963	EMSY (ENSUMAG00000010950) #31	GVQW3 (ENSUMAG00000010946) #32	ENSUMAG00000010943 #33	UVRAG (ENSUMAG00000010891) #35	DGAT2 (ENSUMAG00000010859) #36	MOGAT2 (ENSUMAG00000010842) #37	SERPINH1 (ENSUMAG00000010838)	GDPD5 (ENSUMAG00000010823)
Giant Panda	MODERN SPECIES	18	TENM4 (ENSAMEG00000002255) #7	GAB2 (ENSAMEG00000028338) #9	USP35 (ENSAMEG00000002210) #10	KCTD21 (ENSAMEG00000019900) #11	ENSAMEG00000029890	ALG8 (ENSAMEG00000002183) #12	NDUFC2 (ENSAMEG00000025302) #13	THRSP (ENSAMEG00000019892) #14	KCTD14 (ENSAMEG00000019889) #16	INTS4 (ENSAMEG00000002133) #17	AAMDC (ENSAMEG00000002128) #18	RSF1 (ENSAMEG00000002111) #19	ENSAMEG00000029619	ENSAMEG00000002097	AQP11 (ENSAMEG00000005651) #20	PAK1 (ENSAMEG00000005584) #22	GDPD4 (ENSAMEG00000005563) #23	MYO7A (ENSAMEG00000009185) #24	CAPN5 (ENSAMEG00000009127) #26	B3GNT6 (ENSAMEG00000018928) #27	ACER3 (ENSAMEG00000009111) #28	TSKU (ENSAMEG00000020283) #29	ENSAMEG00000016872	LRRC32 (ENSAMEG00000016910) #30	EMSY (ENSAMEG00000016911) #31	GVQW3 (ENSAMEG00000020284) #32	THAP12 (ENSAMEG00000016926) #33	WNT11 (ENSAMEG00000016932) #34	UVRAG (ENSAMEG00000016944) #35	DGAT2 (ENSAMEG00000016958) #36	MOGAT2 (ENSAMEG00000016976) #37
Mustelinae	ANCESTRAL SPECIES	25	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000166485.a	ENSGT00530000064411 #19	ENSGT00390000010063.c.b #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251.h.a #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
American mink	MODERN SPECIES	6	SYNM (ENSNVIG00000001138) #8	GAB2 (ENSNVIG00000001084) #9	USP35 (ENSNVIG00000001044) #10	ENSNVIG00000001038	KCD21 (ENSNVIG00000001036) #11	ALG8 (ENSNVIG00000001004) #12	NDUFC2 (ENSNVIG00000000977) #13	THRSP (ENSNVIG00000000973) #14	KCTD14 (ENSNVIG00000000969) #16	INTS4 (ENSNVIG00000000934) #17	ENSNVIG00000000917 #18	ENSNVIG00000000909	RSF1 (ENSNVIG00000000888) #19	ENSNVIG00000000865	AQP11 (ENSNVIG00000000855) #20	PAK1 (ENSNVIG00000000824) #22	ENSNVIG00000000803 #23	MYO7A (ENSNVIG00000000684) #24	CAPN5 (ENSNVIG00000000641) #26	ENSNVIG00000000632	ACER3 (ENSNVIG00000000606) #28	TSKU (ENSNVIG00000000600) #29	ENSNVIG00000000591	ENSNVIG00000000562	ENSNVIG00000000546	LRRC32 (ENSNVIG00000000538) #30	EMSY (ENSNVIG00000000431) #31	GVQW3 (ENSNVIG00000000425) #32	ENSNVIG00000000416 #33	WNT11 (ENSNVIG00000000391) #34	UVRAG (ENSNVIG00000000349) #35
Ferret	MODERN SPECIES	537											INTS4 (ENSMPUG00000015931) #17	AAMDC (ENSMPUG00000015932) #18	RSF1 (ENSMPUG00000015940) #19	CLNS1A (ENSMPUG00000015944) #21	AQP11 (ENSMPUG00000015947) #20	PAK1 (ENSMPUG00000015949) #22	ENSMPUG00000015954 #23
Canidae	ANCESTRAL SPECIES	17	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128.o #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.c.b #21	ENSGT00390000010063.c.a #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00550000074832.ab	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000003682.v	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128.o #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063.c.a #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00550000074832.ab	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36
Dog	MODERN SPECIES	13	ENSCAFG00845006195	TENM4 (ENSCAFG00845006537) #7	NARS2 (ENSCAFG00845007387) #8	GAB2 (ENSCAFG00845007967) #9	USP35 (ENSCAFG00845008133) #10	KCTD21 (ENSCAFG00845008208) #11	ENSCAFG00845008222	ALG8 (ENSCAFG00845008295) #12	ENSCAFG00845008468	NDUFC2 (ENSCAFG00845008528) #13	THRSP (ENSCAFG00845008564) #14	ENSCAFG00845008643 #17	AAMDC (ENSCAFG00845008924) #18	CLNS1A (ENSCAFG00845009011) #21	AQP11 (ENSCAFG00845009094) #20	PAK1 (ENSCAFG00845009162) #22	ENSCAFG00845009261	GDPD4 (ENSCAFG00845009487) #23	MYO7A (ENSCAFG00845009933) #24	CAPN5 (ENSCAFG00845010073) #26	B3GNT6 (ENSCAFG00845010131) #27	ACER3 (ENSCAFG00845010185) #28	ENSCAFG00845010388	TSKU (ENSCAFG00845010425) #29	ENSCAFG00845010554	ENSCAFG00845010588	ENSCAFG00845010608	LRRC32 (ENSCAFG00845010636) #30	GVQW3 (ENSCAFG00845010675) #32	THAP12 (ENSCAFG00845010711) #33	WNT11 (ENSCAFG00845010773) #34
Dingo	MODERN SPECIES	245	GAB2 (ENSCAFG00020000415) #9	USP35 (ENSCAFG00020000434) #10	KCTD21 (ENSCAFG00020000509) #11	ENSCAFG00020000514	ALG8 (ENSCAFG00020000527) #12	ENSCAFG00020000537	NDUFC2 (ENSCAFG00020000561) #13	THRSP (ENSCAFG00020000573) #14	KCTD14 (ENSCAFG00020000578) #16	ENSCAFG00020000588 #17	AAMDC (ENSCAFG00020000697) #18	RSF1 (ENSCAFG00020000720) #19	ENSCAFG00020000978 #21	AQP11 (ENSCAFG00020001010) #20	ENSCAFG00020001015	PAK1 (ENSCAFG00020001022) #22	GDPD4 (ENSCAFG00020001036) #23	MYO7A (ENSCAFG00020001093) #24	CAPN5 (ENSCAFG00020001423) #26	B3GNT6 (ENSCAFG00020001446) #27	ACER3 (ENSCAFG00020001459) #28	ENSCAFG00020001463	TSKU (ENSCAFG00020001488) #29	ENSCAFG00020001492	ENSCAFG00020001515	LRRC32 (ENSCAFG00020001532) #30	EMSY (ENSCAFG00020001634) #31	GVQW3 (ENSCAFG00020001914) #32	THAP12 (ENSCAFG00020001916) #33	WNT11 (ENSCAFG00020001959) #34	UVRAG (ENSCAFG00020001967) #35
Red fox	MODERN SPECIES	81	NARS2 (ENSVVUG00000022842) #8	GAB2 (ENSVVUG00000022852) #9	USP35 (ENSVVUG00000022858) #10	KCTD21 (ENSVVUG00000022861) #11	ENSVVUG00000022864	ALG8 (ENSVVUG00000022867) #12	ENSVVUG00000022871	NDUFC2 (ENSVVUG00000022872) #13	THRSP (ENSVVUG00000022874) #14	KCTD14 (ENSVVUG00000022877) #16	ENSVVUG00000022914 #17	AAMDC (ENSVVUG00000023530) #18	RSF1 (ENSVVUG00000023532) #19	CLNS1A (ENSVVUG00000023537) #21	AQP11 (ENSVVUG00000023552) #20	PAK1 (ENSVVUG00000023555) #22	GDPD4 (ENSVVUG00000023559) #23	MYO7A (ENSVVUG00000023681) #24	CAPN5 (ENSVVUG00000024255) #26	ENSVVUG00000024257	ACER3 (ENSVVUG00000024261) #28	ENSVVUG00000024265	TSKU (ENSVVUG00000024274) #29	ENSVVUG00000024288	ENSVVUG00000024295	LRRC32 (ENSVVUG00000024297) #30	ENSVVUG00000024300	EMSY (ENSVVUG00000024307) #31	GVQW3 (ENSVVUG00000024331) #32	THAP12 (ENSVVUG00000024332) #33	WNT11 (ENSVVUG00000024336) #34
Felidae	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Cat	MODERN SPECIES	241	TENM4 (ENSFCAG00000004322) #7	NARS2 (ENSFCAG00000007984) #8	GAB2 (ENSFCAG00000007459) #9	USP35 (ENSFCAG00000007458) #10	KCTD21 (ENSFCAG00000042697) #11	ENSFCAG00000034388	ALG8 (ENSFCAG00000025308) #12	ENSFCAG00000029444 #13	THRSP (ENSFCAG00000039734) #14	KCTD14 (ENSFCAG00000043035) #16	INTS4 (ENSFCAG00000022698) #17	AAMDC (ENSFCAG00000007450) #18	RSF1 (ENSFCAG00000007449) #19	CLNS1A (ENSFCAG00000026321) #21	AQP11 (ENSFCAG00000007447) #20	PAK1 (ENSFCAG00000004158) #22	GDPD4 (ENSFCAG00000004157) #23	MYO7A (ENSFCAG00000014446) #24	CAPN5 (ENSFCAG00000014444) #26	B3GNT6 (ENSFCAG00000014442) #27	ACER3 (ENSFCAG00000031003) #28	TSKU (ENSFCAG00000041968) #29	ENSFCAG00000025549	LRRC32 (ENSFCAG00000012007) #30	EMSY (ENSFCAG00000012003) #31	GVQW3 (ENSFCAG00000025300) #32	THAP12 (ENSFCAG00000006764) #33	WNT11 (ENSFCAG00000025418) #34	UVRAG (ENSFCAG00000022180) #35	DGAT2 (ENSFCAG00000040215) #36	MOGAT2 (ENSFCAG00000004632) #37
Panthera	ANCESTRAL SPECIES	23	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Panthera_a	ANCESTRAL SPECIES	24	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00390000005673	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00440000033232.d #32	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
lion	MODERN SPECIES	10	TENM4 (ENSPLOG00000021056) #7	NARS2 (ENSPLOG00000021176) #8	GAB2 (ENSPLOG00000021206) #9	USP35 (ENSPLOG00000021253) #10	ENSPLOG00000021291 #11	ENSPLOG00000021312	ALG8 (ENSPLOG00000021363) #12	ENSPLOG00000021443 #13	THRSP (ENSPLOG00000021468) #14	KCTD14 (ENSPLOG00000021478) #16	INTS4 (ENSPLOG00000021499) #17	AAMDC (ENSPLOG00000021529) #18	RSF1 (ENSPLOG00000021573) #19	CLNS1A (ENSPLOG00000004913) #21	AQP11 (ENSPLOG00000004938) #20	PAK1 (ENSPLOG00000004964) #22	MYO7A (ENSPLOG00000005121) #24	CAPN5 (ENSPLOG00000005252) #26	B3GNT6 (ENSPLOG00000005267) #27	ACER3 (ENSPLOG00000005289) #28	TSKU (ENSPLOG00000005323) #29	ENSPLOG00000005339	ENSPLOG00000005358	ENSPLOG00000005376	LRRC32 (ENSPLOG00000005396) #30	EMSY (ENSPLOG00000005554) #31	GVQW3 (ENSPLOG00000005758) #32	THAP12 (ENSPLOG00000005843) #33	WNT11 (ENSPLOG00000005866) #34	UVRAG (ENSPLOG00000005912) #35	DGAT2 (ENSPLOG00000005990) #36
leopard	MODERN SPECIES	17	NARS2 (ENSPPRG00000001838) #8	ENSPPRG00000003277	GAB2 (ENSPPRG00000004004) #9	USP35 (ENSPPRG00000004495) #10	ENSPPRG00000017162	KCTD21 (ENSPPRG00000017214) #11	ALG8 (ENSPPRG00000005691) #12	ENSPPRG00000007066 #13	THRSP (ENSPPRG00000017258) #14	KCTD14 (ENSPPRG00000017268) #16	INTS4 (ENSPPRG00000008445) #17	AAMDC (ENSPPRG00000008947) #18	RSF1 (ENSPPRG00000009730) #19	CLNS1A (ENSPPRG00000012218) #21	AQP11 (ENSPPRG00000012766) #20	PAK1 (ENSPPRG00000017647) #22	GDPD4 (ENSPPRG00000023602) #23	MYO7A (ENSPPRG00000008347) #24	CAPN5 (ENSPPRG00000009255) #26	B3GNT6 (ENSPPRG00000017917) #27	ACER3 (ENSPPRG00000011781) #28	TSKU (ENSPPRG00000017969) #29	ENSPPRG00000012568	ENSPPRG00000013613	LRRC32 (ENSPPRG00000014260) #30	EMSY (ENSPPRG00000004765) #31	GVQW3 (ENSPPRG00000018362) #32	THAP12 (ENSPPRG00000005378) #33	WNT11 (ENSPPRG00000006331) #34	UVRAG (ENSPPRG00000007658) #35	DGAT2 (ENSPPRG00000009451) #36
Tiger	MODERN SPECIES	123	ENSPTIG00000009402	NARS2 (ENSPTIG00000008940) #8	GAB2 (ENSPTIG00000008792) #9	USP35 (ENSPTIG00000008738) #10	ENSPTIG00000009874	KCTD21 (ENSPTIG00000009866) #11	ALG8 (ENSPTIG00000008488) #12	ENSPTIG00000008425 #13	THRSP (ENSPTIG00000009858) #14	KCTD14 (ENSPTIG00000009850) #16	INTS4 (ENSPTIG00000008116) #17	AAMDC (ENSPTIG00000007970) #18	RSF1 (ENSPTIG00000007738) #19	CLNS1A (ENSPTIG00000007611) #21	AQP11 (ENSPTIG00000007423) #20	PAK1 (ENSPTIG00000006531) #22	GDPD4 (ENSPTIG00000005676) #23	MYO7A (ENSPTIG00000000193) #24	CAPN5 (ENSPTIG00000019765) #26	ACER3 (ENSPTIG00000019527) #28	TSKU (ENSPTIG00000009783) #29	ENSPTIG00000019438	LRRC32 (ENSPTIG00000019326) #30	EMSY (ENSPTIG00000018392) #31	GVQW3 (ENSPTIG00000009766) #32	THAP12 (ENSPTIG00000018125) #33	WNT11 (ENSPTIG00000018045) #34	ENSPTIG00000018040 #35
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00940000158099	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.b #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000156163
Afrotheria	ANCESTRAL SPECIES	41	ENSGT00940000158099	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00940000163174 #27	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.c.a ##33	ENSGT00530000063516.a.a.d ##33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Tenrec	MODERN SPECIES	7080																PAK1 (ENSETEG00000005004) #22	ENSETEG00000004996 #23
Afrotheria_a	ANCESTRAL SPECIES	120	ENSGT00940000158099	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22
Elephant	MODERN SPECIES	486	ENSLAFG00000026823 ##7	TENM4 (ENSLAFG00000007840) #7	NARS2 (ENSLAFG00000008484) #8	GAB2 (ENSLAFG00000015015) #9	USP35 (ENSLAFG00000015007) #10	KCTD21 (ENSLAFG00000030533) #11	ALG8 (ENSLAFG00000018266) #12	NDUFC2 (ENSLAFG00000001271) #13	THRSP (ENSLAFG00000022714) #14	KCTD14 (ENSLAFG00000017412) #16	INTS4 (ENSLAFG00000017400) #17	AAMDC (ENSLAFG00000000518) #18	RSF1 (ENSLAFG00000003194) #19	CLNS1A (ENSLAFG00000003193) #21	AQP11 (ENSLAFG00000003192) #20	PAK1 (ENSLAFG00000017795) #22
Hyrax	MODERN SPECIES	3664																PAK1 (ENSPCAG00000003673) #22
Xenarthra	ANCESTRAL SPECIES	746												ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24
Armadillo	MODERN SPECIES	2306										INTS4 (ENSDNOG00000016949) #17	ENSDNOG00000035292	AAMDC (ENSDNOG00000001246) #18	CLNS1A (ENSDNOG00000040279) #21	AQP11 (ENSDNOG00000009191) #20	RSF1 (ENSDNOG00000040916) #19	PAK1 (ENSDNOG00000012400) #22	GDPD4 (ENSDNOG00000010411) #23	MYO7A (ENSDNOG00000025971) #24
Sloth	MODERN SPECIES	4005																PAK1 (ENSCHOG00000003777) #22
Marsupialia	ANCESTRAL SPECIES	28	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT01100000263754
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT01100000263754
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.e.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT01100000263754
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000162288 #30	ENSGT00390000009554 #31	ENSGT00530000063516.a.a.e.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT01100000263754
koala	DUPLICATION
koala	MODERN SPECIES	35			KCTD21 (ENSPCIG00000009181) #11	ENSPCIG00000009182	ALG8 (ENSPCIG00000016750) #12	NDUFC2 (ENSPCIG00000034850) #13	ENSPCIG00000035362	THRSP (ENSPCIG00000016747) #14	INTS4 (ENSPCIG00000016702) #17	AAMDC (ENSPCIG00000016695) #18	RSF1 (ENSPCIG00000032364) #19	ENSPCIG00000036516	CLNS1A (ENSPCIG00000012722) #21	AQP11 (ENSPCIG00000012721) #20	ENSPCIG00000031577 #22	ENSPCIG00000033835 #22	ENSPCIG00000012712 #23	MYO7A (ENSPCIG00000011525) #24	CAPN5 (ENSPCIG00000011406) #26	ACER3 (ENSPCIG00000011402) #28	TSKU (ENSPCIG00000011401) #29	ENSPCIG00000011400	LRRC32 (ENSPCIG00000011397) #30	EMSY (ENSPCIG00000011389) #31	ENSPCIG00000011376 #33	ENSPCIG00000011379	WNT11 (ENSPCIG00000011373) #34	UVRAG (ENSPCIG00000009778) #35	DGAT2 (ENSPCIG00000009770) #36	MOGAT2 (ENSPCIG00000009767) #37	ENSPCIG00000009766
koala	MODERN SPECIES	35				KCTD21 (ENSPCIG00000009181) #11	ENSPCIG00000009182	ALG8 (ENSPCIG00000016750) #12	NDUFC2 (ENSPCIG00000034850) #13	ENSPCIG00000035362	THRSP (ENSPCIG00000016747) #14	INTS4 (ENSPCIG00000016702) #17	AAMDC (ENSPCIG00000016695) #18	RSF1 (ENSPCIG00000032364) #19	ENSPCIG00000036516	CLNS1A (ENSPCIG00000012722) #21	AQP11 (ENSPCIG00000012721) #20	ENSPCIG00000031577 #22	ENSPCIG00000033835 #22	ENSPCIG00000012712 #23	MYO7A (ENSPCIG00000011525) #24	CAPN5 (ENSPCIG00000011406) #26	ACER3 (ENSPCIG00000011402) #28	TSKU (ENSPCIG00000011401) #29	ENSPCIG00000011400	LRRC32 (ENSPCIG00000011397) #30	EMSY (ENSPCIG00000011389) #31	ENSPCIG00000011376 #33	ENSPCIG00000011379	WNT11 (ENSPCIG00000011373) #34	UVRAG (ENSPCIG00000009778) #35	DGAT2 (ENSPCIG00000009770) #36	MOGAT2 (ENSPCIG00000009767) #37
Common wonbat	MODERN SPECIES	342	ENSVURG00010016515	NARS2 (ENSVURG00010016527) #8	GAB2 (ENSVURG00010016550) #9	USP35 (ENSVURG00010016572) #10	KCTD21 (ENSVURG00010016589) #11	ALG8 (ENSVURG00010016605) #12	NDUFC2 (ENSVURG00010016626) #13	THRSP (ENSVURG00010016632) #14	KCTD14 (ENSVURG00010016638) #16	INTS4 (ENSVURG00010016654) #17	AAMDC (ENSVURG00010016675) #18	ENSVURG00010016678	RSF1 (ENSVURG00010016689) #19	CLNS1A (ENSVURG00010016703) #21	AQP11 (ENSVURG00010016710) #20	PAK1 (ENSVURG00010016719) #22	ENSVURG00010016729	MYO7A (ENSVURG00010016744) #24	CAPN5 (ENSVURG00010016832) #26	ACER3 (ENSVURG00010016843) #28	TSKU (ENSVURG00010016852) #29	ENSVURG00010016858	ENSVURG00010016875	LRRC32 (ENSVURG00010016917) #30	EMSY (ENSVURG00010016923) #31	ENSVURG00010016926 #33	ENSVURG00010016929 #33	WNT11 (ENSVURG00010016934) #34	UVRAG (ENSVURG00010016946) #35	DGAT2 (ENSVURG00010016956) #36	MOGAT2 (ENSVURG00010016965) #37
Wallaby	MODERN SPECIES	5596																PAK1 (ENSMEUG00000002092) #22
Tasmanian devil	MODERN SPECIES	2	APOA5 (ENSSHAG00000029383)	ENSSHAG00000026300	ENSSHAG00000013306	ENSSHAG00000013226	SIK3 (ENSSHAG00000012560)	ENSSHAG00000022660	SIDT2 (ENSSHAG00000011203)	TAGLN (ENSSHAG00000011128)	PCSK7 (ENSSHAG00000010944)	RNF214 (ENSSHAG00000010827)	BACE1 (ENSSHAG00000010636)	ENSSHAG00000010066	DSCAML1 (ENSSHAG00000008967)	ENSSHAG00000004432	ENSSHAG00000025068	ENSSHAG00000006255 #22	ENSSHAG00000031069	ENSSHAG00000007754 #23	MYO7A (ENSSHAG00000008693) #24	CAPN5 (ENSSHAG00000010007) #26	ACER3 (ENSSHAG00000028417) #28	TSKU (ENSSHAG00000022495) #29	ENSSHAG00000021264	ENSSHAG00000025079	LRRC32 (ENSSHAG00000007473) #30	ENSSHAG00000009255 #31	ENSSHAG00000031959 #31	THAP12 (ENSSHAG00000027613) #33	WNT11 (ENSSHAG00000010411) #34	UVRAG (ENSSHAG00000029637) #35	DGAT2 (ENSSHAG00000031450) #36
Opossum	MODERN SPECIES	3	ENSMODG00000039785	ENSMODG00000049406 #8	GAB2 (ENSMODG00000004729) #9	USP35 (ENSMODG00000004750) #10	KCTD21 (ENSMODG00000024059) #11	ALG8 (ENSMODG00000004770) #12	NDUFC2 (ENSMODG00000039255) #13	THRSP (ENSMODG00000024057) #14	KCTD14 (ENSMODG00000049333) #16	INTS4 (ENSMODG00000004889) #17	AAMDC (ENSMODG00000004901) #18	ENSMODG00000048703	RSF1 (ENSMODG00000004917) #19	ENSMODG00000005025 #21	ENSMODG00000005033 #20	PAK1 (ENSMODG00000005078) #22	ENSMODG00000005090 #23	ENSMODG00000043534	ENSMODG00000005168 #24	CAPN5 (ENSMODG00000005198) #26	ACER3 (ENSMODG00000005216) #28	ENSMODG00000005223	TSKU (ENSMODG00000024044) #29	ENSMODG00000005266	LRRC32 (ENSMODG00000005278) #30	EMSY (ENSMODG00000005305) #31	ENSMODG00000027530	THAP12 (ENSMODG00000005315) #33	ENSMODG00000037256	WNT11 (ENSMODG00000005538) #34	FOLH1 (ENSMODG00000002667)
Platypus	MODERN SPECIES	12	PCF11 (ENSOANG00000006552)	RAB30 (ENSOANG00000014498)	PRCP (ENSOANG00000011106)	ENSOANG00000036733	TENM4 (ENSOANG00000050564) #7	NARS2 (ENSOANG00000001381) #8	GAB2 (ENSOANG00000045791) #9	ENSOANG00000038394 #12	ENSOANG00000045583 #13	ENSOANG00000047225 #16	INTS4 (ENSOANG00000041934) #17	ENSOANG00000038615 #18	RSF1 (ENSOANG00000050976) #19	ENSOANG00000009523 #21	ENSOANG00000009868 #20	PAK1 (ENSOANG00000009867) #22	ENSOANG00000009866 #23	MYO7A (ENSOANG00000030202) #24	CAPN5 (ENSOANG00000041577) #26	B3GNT6 (ENSOANG00000044430) #27	ACER3 (ENSOANG00000001122) #28	ENSOANG00000040240 #29	ENSOANG00000001116	LRRC32 (ENSOANG00000047117) #30	EMSY (ENSOANG00000013569) #31	THAP12 (ENSOANG00000000831) #33	WNT11 (ENSOANG00000049556) #34	UVRAG (ENSOANG00000014556) #35	DGAT2 (ENSOANG00000014557) #36	MOGAT2 (ENSOANG00000009381) #37	ENSOANG00000045504
Sauria	ANCESTRAL SPECIES	2	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000159306	ENSGT00940000153761.A	ENSGT00610000086191	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.l	ENSGT00940000162032	ENSGT00940000163623
Archelosauria	ANCESTRAL SPECIES		ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000159306	ENSGT00940000153761.A	ENSGT00610000086191	ENSGT00940000161326	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34
Cryptodira	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093
Chinese turtle	MODERN SPECIES	1765	TENM4 (ENSPSIG00000003653) #7	ENSPSIG00000003812	NARS2 (ENSPSIG00000003892) #8	GAB2 (ENSPSIG00000003979) #9	USP35 (ENSPSIG00000004110) #10	KCTD21 (ENSPSIG00000001339) #11	ALG8 (ENSPSIG00000004217) #12	NDUFC2 (ENSPSIG00000004249) #13	THRSP (ENSPSIG00000001362) #14	KCTD14 (ENSPSIG00000001388) #16	INTS4 (ENSPSIG00000004261) #17	AAMDC (ENSPSIG00000004604) #18	RSF1 (ENSPSIG00000004628) #19	CLNS1A (ENSPSIG00000004706) #21	AQP11 (ENSPSIG00000004713) #20	PAK1 (ENSPSIG00000004781) #22	ENSPSIG00000001404	GDPD4 (ENSPSIG00000005088) #23
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a.u #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093
Testudinidae	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a.u #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT01060000248528.b.jh.a.b	ENSGT01100000263559.A.f	ENSGT00940000153092.a.a	ENSGT01100000263474.a.b.b.k	ENSGT01100000263504.a.b.b.b.a.a	ENSGT01100000263474.a.b.b.j.b.b.b.a.b	ENSGT01100000263504.a.b.b.b.b	ENSGT01060000248528.b.kh	ENSGT01100000263559.B	ENSGT01100000263474.a.b.b.j.a.b.a.a
Abingdon island giant tortoise	MODERN SPECIES	2829																ENSCABG00000015865 #22	GDPD4 (ENSCABG00000015836) #23	MYO7A (ENSCABG00000015804) #24	OMP (ENSCABG00000015791) #25	CAPN5 (ENSCABG00000015783) #26	ACER3 (ENSCABG00000015777) #28	ENSCABG00000015773	TSKU (ENSCABG00000015772) #29
Goode s thornscrub tortoise	MODERN SPECIES		TENM4 (ENSGEVG00005001737) #7	ENSGEVG00005001716	NARS2 (ENSGEVG00005001682) #8	GAB2 (ENSGEVG00005001656) #9	USP35 (ENSGEVG00005001635) #10	KCTD21 (ENSGEVG00005001618) #11	ENSGEVG00005001605	ALG8 (ENSGEVG00005001411) #12	NDUFC2 (ENSGEVG00005001319) #13	THRSP (ENSGEVG00005001313) #14	KCTD14 (ENSGEVG00005001299) #16	INTS4 (ENSGEVG00005001269) #17	AAMDC (ENSGEVG00005001244) #18	RSF1 (ENSGEVG00005001189) #19	AQP11 (ENSGEVG00005001145) #20	PAK1 (ENSGEVG00005001045) #22	ENSGEVG00005000949	MYO7A (ENSGEVG00005000901) #24	CAPN5 (ENSGEVG00005000863) #26	ENSGEVG00005000839 #28	ENSGEVG00005000823 #28	ENSGEVG00005000810	TSKU (ENSGEVG00005000802) #29	ENSGEVG00005000789	ENSGEVG00005000778	EMSY (ENSGEVG00005000727) #31	THAP12 (ENSGEVG00005000657) #33	WNT11 (ENSGEVG00005000625) #34	UVRAG (ENSGEVG00005000579) #35	DGAT2 (ENSGEVG00005000559) #36	MOGAT2 (ENSGEVG00005000505) #37
Emydidae	ANCESTRAL SPECIES	19	ENSGT01030000234566.e.b.b.a #7	ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a.u #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093	ENSGT00940000159690
painted turtle	MODERN SPECIES	792				GAB2 (ENSCPBG00000027803) #9	USP35 (ENSCPBG00000027802) #10	KCTD21 (ENSCPBG00000027801) #11	ALG8 (ENSCPBG00000027799) #12	NDUFC2 (ENSCPBG00000027798) #13	THRSP (ENSCPBG00000027797) #14	KCTD14 (ENSCPBG00000027796) #16	INTS4 (ENSCPBG00000027794) #17	AAMDC (ENSCPBG00000027793) #18	RSF1 (ENSCPBG00000027792) #19	CLNS1A (ENSCPBG00000027791) #21	AQP11 (ENSCPBG00000027790) #20	PAK1 (ENSCPBG00000027789) #22	GDPD4 (ENSCPBG00000027787) #23	MYO7A (ENSCPBG00000027740) #24	CAPN5 (ENSCPBG00000027729) #26	ENSCPBG00000027727	ACER3 (ENSCPBG00000027726) #28	TSKU (ENSCPBG00000027723) #29	ENSCPBG00000027719	EMSY (ENSCPBG00000027714) #31	THAP12 (ENSCPBG00000027710) #33	WNT11 (ENSCPBG00000027708) #34	UVRAG (ENSCPBG00000027703) #35	DGAT2 (ENSCPBG00000027699) #36	MOGAT2 (ENSCPBG00000027691) #37	MAP6 (ENSCPBG00000027688)	KLHL35 (ENSCPBG00000027686)
Three-toed box turtle	MODERN SPECIES	41	ENSTMTG00000016180	ENSTMTG00000016175	TENM4 (ENSTMTG00000015955) #7	ENSTMTG00000014577	ENSTMTG00000014460 #8	GAB2 (ENSTMTG00000014446) #9	USP35 (ENSTMTG00000014409) #10	KCTD21 (ENSTMTG00000014391) #11	ALG8 (ENSTMTG00000014366) #12	ENSTMTG00000014350 #14	KCTD14 (ENSTMTG00000014344) #16	INTS4 (ENSTMTG00000014327) #17	AAMDC (ENSTMTG00000014308) #18	RSF1 (ENSTMTG00000002477) #19	CLNS1A (ENSTMTG00000002472) #21	PAK1 (ENSTMTG00000002411) #22	GDPD4 (ENSTMTG00000002370) #23	ENSTMTG00000002352	MYO7A (ENSTMTG00000002331) #24	CAPN5 (ENSTMTG00000002326) #26	ENSTMTG00000002321 #28	TSKU (ENSTMTG00000002316) #29	ENSTMTG00000002314	EMSY (ENSTMTG00000002301) #31	THAP12 (ENSTMTG00000002293) #33	WNT11 (ENSTMTG00000002286) #34	UVRAG (ENSTMTG00000002107) #35	DGAT2 (ENSTMTG00000002074) #36	MOGAT2 (ENSTMTG00000002054) #37	MAP6 (ENSTMTG00000002044)	ENSTMTG00000002033
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00950000182988.a.b.a.v #22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00950000182988.a.b.a.v #22
Abingdon island giant tortoise	MODERN SPECIES	2786						KCTD21 (ENSCABG00000000667) #11	ALG8 (ENSCABG00000000675) #12	NDUFC2 (ENSCABG00000000818) #13	THRSP (ENSCABG00000000819) #14	KCTD14 (ENSCABG00000000823) #16	INTS4 (ENSCABG00000000838) #17	AAMDC (ENSCABG00000001198) #18	RSF1 (ENSCABG00000001219) #19	CLNS1A (ENSCABG00000001639) #21	AQP11 (ENSCABG00000001641) #20	ENSCABG00000001647 #22	ENSCABG00000001651	SLC30A1 (ENSCABG00000001652)
Archosauria	ANCESTRAL SPECIES	2	ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000161326	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37
Australian saltwater crocodile	MODERN SPECIES	27	TENM4 (ENSCPRG00005016289) #7	ENSCPRG00005016320	NARS2 (ENSCPRG00005016483) #8	GAB2 (ENSCPRG00005016506) #9	USP35 (ENSCPRG00005016511) #10	KCTD21 (ENSCPRG00005016523) #11	ALG8 (ENSCPRG00005016526) #12	NDUFC2 (ENSCPRG00005016533) #13	THRSP (ENSCPRG00005016537) #14	KCTD14 (ENSCPRG00005016541) #16	INTS4 (ENSCPRG00005016547) #17	AAMDC (ENSCPRG00005016554) #18	RSF1 (ENSCPRG00005016559) #19	CLNS1A (ENSCPRG00005016564) #21	AQP11 (ENSCPRG00005016566) #20	PAK1 (ENSCPRG00005016581) #22	MYO7A (ENSCPRG00005016611) #24	CAPN5 (ENSCPRG00005016650) #26	OMP (ENSCPRG00005016654) #25	ACER3 (ENSCPRG00005016661) #28	TSKU (ENSCPRG00005016664) #29	ENSCPRG00005016671	ENSCPRG00005016675	ENSCPRG00005016678	ENSCPRG00005016690	EMSY (ENSCPRG00005016708) #31	THAP12 (ENSCPRG00005016723) #33	WNT11 (ENSCPRG00005016733) #34	UVRAG (ENSCPRG00005016749) #35	ENSCPRG00005016765	XNDC1N (ENSCPRG00005016770)
Aves	ANCESTRAL SPECIES	33	ENSGT00950000183127.b.h.a.b	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
African ostrich	MODERN SPECIES	1067										KCTD14 (ENSSCUG00000017439) #16	INTS4 (ENSSCUG00000017442) #17	AAMDC (ENSSCUG00000017468) #18	RSF1 (ENSSCUG00000017470) #19	ENSSCUG00000017474	AQP11 (ENSSCUG00000017480) #20	PAK1 (ENSSCUG00000017487) #22	GDPD4 (ENSSCUG00000017489) #23	MYO7A (ENSSCUG00000017496) #24	CAPN5 (ENSSCUG00000017512) #26	ACER3 (ENSSCUG00000017514) #28	ENSSCUG00000017515	TSKU (ENSSCUG00000017517) #29	ENSSCUG00000017518	ENSSCUG00000017520	ENSSCUG00000017521	ENSSCUG00000017524	EMSY (ENSSCUG00000017525) #31	THAP12 (ENSSCUG00000017528) #33	WNT11 (ENSSCUG00000017530) #34	UVRAG (ENSSCUG00000017535) #35	DGAT2 (ENSSCUG00000017540) #36
Neognathae	ANCESTRAL SPECIES	1	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Neognathae_b	ANCESTRAL SPECIES		ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093
Golden eagle	MODERN SPECIES	10	NARS2 (ENSACCG00020009489) #8	GAB2 (ENSACCG00020009521) #9	USP35 (ENSACCG00020009536) #10	KCTD21 (ENSACCG00020009555) #11	ALG8 (ENSACCG00020009570) #12	NDUFC2 (ENSACCG00020009583) #13	ENSACCG00020009591 #14	ENSACCG00020009607 #14	ENSACCG00020009616 #14	KCTD14 (ENSACCG00020009629) #16	INTS4 (ENSACCG00020009671) #17	AAMDC (ENSACCG00020009724) #18	RSF1 (ENSACCG00020009744) #19	CLNS1A (ENSACCG00020009776) #21	AQP11 (ENSACCG00020009797) #20	PAK1 (ENSACCG00020009813) #22	GDPD4 (ENSACCG00020009848) #23	MYO7A (ENSACCG00020009902) #24	CAPN5 (ENSACCG00020009954) #26	ACER3 (ENSACCG00020009979) #28	TSKU (ENSACCG00020009994) #29	ENSACCG00020010011	ENSACCG00020010023	ENSACCG00020010032	EMSY (ENSACCG00020010145) #31	THAP12 (ENSACCG00020010205) #33	WNT11 (ENSACCG00020010218) #34	UVRAG (ENSACCG00020010234) #35	DGAT2 (ENSACCG00020010246) #36	MOGAT2 (ENSACCG00020010260) #37	MAP6 (ENSACCG00020010276)
Kakapo	MODERN SPECIES	11	TENM4 (ENSSHBG00005016336) #7	NARS2 (ENSSHBG00005019116) #8	GAB2 (ENSSHBG00005019121) #9	USP35 (ENSSHBG00005019128) #10	KCTD21 (ENSSHBG00005019132) #11	ALG8 (ENSSHBG00005019138) #12	NDUFC2 (ENSSHBG00005019140) #13	ENSSHBG00005019141 #14	ENSSHBG00005019143 #14	KCTD14 (ENSSHBG00005019145) #16	ENSSHBG00005019147 #17	AAMDC (ENSSHBG00005019150) #18	RSF1 (ENSSHBG00005019153) #19	CLNS1A (ENSSHBG00005019157) #21	AQP11 (ENSSHBG00005019160) #20	PAK1 (ENSSHBG00005019173) #22	GDPD4 (ENSSHBG00005019210) #23	MYO7A (ENSSHBG00005019272) #24	CAPN5 (ENSSHBG00005019543) #26	ACER3 (ENSSHBG00005019550) #28	TSKU (ENSSHBG00005019555) #29	ENSSHBG00005019559	ENSSHBG00005019561	ENSSHBG00005019563	ENSSHBG00005019566	EMSY (ENSSHBG00005019574) #31	THAP12 (ENSSHBG00005019587) #33	WNT11 (ENSSHBG00005019592) #34	UVRAG (ENSSHBG00005019598) #35	DGAT2 (ENSSHBG00005019605) #36	MOGAT2 (ENSSHBG00005019607) #37
Passeriformes	ANCESTRAL SPECIES	1	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623.f	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a	ENSGT00940000154904.b.n.b.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b
Great tit	MODERN SPECIES		ENSPMJG00000001878	TENM4 (ENSPMJG00000002222) #7	NARS2 (ENSPMJG00000002370) #8	GAB2 (ENSPMJG00000002591) #9	USP35 (ENSPMJG00000002606) #10	KCTD21 (ENSPMJG00000002622) #11	ALG8 (ENSPMJG00000002636) #12	NDUFC2 (ENSPMJG00000002647) #13	ENSPMJG00000002650 #14	KCTD14 (ENSPMJG00000002652) #16	INTS4 (ENSPMJG00000002654) #17	AAMDC (ENSPMJG00000002671) #18	RSF1 (ENSPMJG00000002677) #19	CLNS1A (ENSPMJG00000002686) #21	AQP11 (ENSPMJG00000002710) #20	PAK1 (ENSPMJG00000002892) #22	GDPD4 (ENSPMJG00000002946) #23	MYO7A (ENSPMJG00000002956) #24	ENSPMJG00000003036	CAPN5 (ENSPMJG00000003043) #26	ACER3 (ENSPMJG00000003270) #28	TSKU (ENSPMJG00000003272) #29	ENSPMJG00000003275	ENSPMJG00000003300	ENSPMJG00000003305	ENSPMJG00000003369	ENSPMJG00000003383	ENSPMJG00000003387	ENSPMJG00000003393	KLRG1 (ENSPMJG00000003406)	M6PR (ENSPMJG00000003415)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623.f	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a.a	ENSGT00940000154904.b.n.b.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b
Flycatcher	MODERN SPECIES		TENM4 (ENSFALG00000007664) #7	NARS2 (ENSFALG00000026154) #8	GAB2 (ENSFALG00000007657) #9	USP35 (ENSFALG00000007648) #10	KCTD21 (ENSFALG00000015047) #11	ALG8 (ENSFALG00000007638) #12	ENSFALG00000015022	ENSFALG00000015008 #14	ENSFALG00000022877 #14	KCTD14 (ENSFALG00000024292) #16	INTS4 (ENSFALG00000007624) #17	AAMDC (ENSFALG00000027164) #18	RSF1 (ENSFALG00000007612) #19	CLNS1A (ENSFALG00000024366) #21	AQP11 (ENSFALG00000007604) #20	PAK1 (ENSFALG00000007597) #22	GDPD4 (ENSFALG00000007587) #23	MYO7A (ENSFALG00000007572) #24	CAPN5 (ENSFALG00000007567) #26	ENSFALG00000025819	ACER3 (ENSFALG00000007565) #28	TSKU (ENSFALG00000014969) #29	ENSFALG00000007535	ENSFALG00000026315	ENSFALG00000007514	ENSFALG00000007470	ENSFALG00000007399	ENSFALG00000007366	KLRG1 (ENSFALG00000007361)	M6PR (ENSFALG00000027874)	PHC1 (ENSFALG00000007352)
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623.f	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a.b	ENSGT00940000154904.b.n.b.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00390000004056	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623.f	ENSGT00940000158779	ENSGT00940000154904.b.n.b.a.b	ENSGT00940000154904.b.n.b.b	ENSGT00940000156296	ENSGT00390000002109	ENSGT00940000156612	ENSGT00940000163990.b.b
Common canary	DUPLICATION
Common canary	MODERN SPECIES	4	HIKESHI (ENSSCAG00000001551)	TENM4 (ENSSCAG00000001503) #7	NARS2 (ENSSCAG00000001306) #8	GAB2 (ENSSCAG00000001264) #9	USP35 (ENSSCAG00000001248) #10	ENSSCAG00000001238	KCTD21 (ENSSCAG00000001228) #11	ALG8 (ENSSCAG00000001149) #12	NDUFC2 (ENSSCAG00000001114) #13	KCTD14 (ENSSCAG00000001102) #16	INTS4 (ENSSCAG00000001084) #17	AAMDC (ENSSCAG00000001075) #18	RSF1 (ENSSCAG00000001065) #19	ENSSCAG00000001060	AQP11 (ENSSCAG00000001051) #20	ENSSCAG00000001042 #22	ENSSCAG00000001027 #22	ENSSCAG00000001012 #23	MYO7A (ENSSCAG00000000597) #24	OMP (ENSSCAG00000000545) #25	CAPN5 (ENSSCAG00000000537) #26	ACER3 (ENSSCAG00000000529) #28	TSKU (ENSSCAG00000000516) #29	ENSSCAG00000000480	ENSSCAG00000000463	ENSSCAG00000000438	ENSSCAG00000000358	ENSSCAG00000000331	ENSSCAG00000000092	KLRG1 (ENSSCAG00000000062)	M6PR (ENSSCAG00000000059)
Common canary	MODERN SPECIES	4	TENM4 (ENSSCAG00000001503) #7	NARS2 (ENSSCAG00000001306) #8	GAB2 (ENSSCAG00000001264) #9	USP35 (ENSSCAG00000001248) #10	ENSSCAG00000001238	KCTD21 (ENSSCAG00000001228) #11	ALG8 (ENSSCAG00000001149) #12	NDUFC2 (ENSSCAG00000001114) #13	KCTD14 (ENSSCAG00000001102) #16	INTS4 (ENSSCAG00000001084) #17	AAMDC (ENSSCAG00000001075) #18	RSF1 (ENSSCAG00000001065) #19	ENSSCAG00000001060	AQP11 (ENSSCAG00000001051) #20	ENSSCAG00000001042 #22	ENSSCAG00000001027 #22	ENSSCAG00000001012 #23	MYO7A (ENSSCAG00000000597) #24	OMP (ENSSCAG00000000545) #25	CAPN5 (ENSSCAG00000000537) #26	ACER3 (ENSSCAG00000000529) #28	TSKU (ENSSCAG00000000516) #29	ENSSCAG00000000480	ENSSCAG00000000463	ENSSCAG00000000438	ENSSCAG00000000358	ENSSCAG00000000331	ENSSCAG00000000092	KLRG1 (ENSSCAG00000000062)	M6PR (ENSSCAG00000000059)	PHC1 (ENSSCAG00000000052)
Zebra finch	MODERN SPECIES		ENSTGUG00000021851	KCTD21 (ENSTGUG00000028148) #11	ALG8 (ENSTGUG00000013014) #12	NDUFC2 (ENSTGUG00000022186) #13	ENSTGUG00000022842 #14	ENSTGUG00000020689 #14	ENSTGUG00000027862 #14	ENSTGUG00000020386 #14	ENSTGUG00000013017 #14	KCTD14 (ENSTGUG00000013019) #16	INTS4 (ENSTGUG00000013020) #17	AAMDC (ENSTGUG00000013026) #18	RSF1 (ENSTGUG00000013027) #19	CLNS1A (ENSTGUG00000013030) #21	AQP11 (ENSTGUG00000013033) #20	PAK1 (ENSTGUG00000013034) #22	GDPD4 (ENSTGUG00000013039) #23	MYO7A (ENSTGUG00000013043) #24	OMP (ENSTGUG00000023275) #25	CAPN5 (ENSTGUG00000013052) #26	ACER3 (ENSTGUG00000024960) #28	TSKU (ENSTGUG00000029224) #29	ENSTGUG00000013060	ENSTGUG00000022219	ENSTGUG00000018189	ENSTGUG00000013069	ENSTGUG00000013071	ENSTGUG00000013087	KLRG1 (ENSTGUG00000020922)	M6PR (ENSTGUG00000013099)	PHC1 (ENSTGUG00000013100)
Medium ground finch	MODERN SPECIES	147									ENSGFOG00000010394 #14	KCTD14 (ENSGFOG00000010398) #16	INTS4 (ENSGFOG00000010406) #17	AAMDC (ENSGFOG00000010415) #18	RSF1 (ENSGFOG00000010427) #19	ENSGFOG00000010436	AQP11 (ENSGFOG00000010440) #20	PAK1 (ENSGFOG00000010446) #22	GDPD4 (ENSGFOG00000010467) #23	MYO7A (ENSGFOG00000010562) #24	CAPN5 (ENSGFOG00000010685) #26	ACER3 (ENSGFOG00000010704) #28	TSKU (ENSGFOG00000010714) #29	ENSGFOG00000010720	ENSGFOG00000010750	ENSGFOG00000010760	ENSGFOG00000010799	ENSGFOG00000010833	ENSGFOG00000010844	ENSGFOG00000010860	ENSGFOG00000010866	ENSGFOG00000010872	KLRG1 (ENSGFOG00000010878)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554.l #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Anatidae	ANCESTRAL SPECIES	64	ENSGT01100000263477.D.c	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00390000009497 #25	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554.l #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Duck	DUPLICATION
Duck	MODERN SPECIES		TENM4 (ENSAPLG00000004223) #7	ENSAPLG00000024442	NARS2 (ENSAPLG00000005256) #8	GAB2 (ENSAPLG00000005487) #9	USP35 (ENSAPLG00000005646) #10	KCTD21 (ENSAPLG00000001767) #11	ALG8 (ENSAPLG00000005720) #12	ENSAPLG00000027987	KCTD14 (ENSAPLG00000001786) #16	ENSAPLG00000029259	INTS4 (ENSAPLG00000006018) #17	AAMDC (ENSAPLG00000006327) #18	RSF1 (ENSAPLG00000018559) #19	ENSAPLG00000006540	AQP11 (ENSAPLG00000006765) #20	ENSAPLG00000028244 #22	ENSAPLG00000006771 #22	GDPD4 (ENSAPLG00000007426) #23	MYO7A (ENSAPLG00000007675) #24	OMP (ENSAPLG00000016937) #25	CAPN5 (ENSAPLG00000009147) #26	ACER3 (ENSAPLG00000009659) #28	TSKU (ENSAPLG00000001790) #29	ENSAPLG00000009760	ENSAPLG00000009988	EMSY (ENSAPLG00000010078) #31	THAP12 (ENSAPLG00000010379) #33	WNT11 (ENSAPLG00000010439) #34	UVRAG (ENSAPLG00000010570) #35	DGAT2 (ENSAPLG00000011172) #36	MOGAT2 (ENSAPLG00000011246) #37
Duck	MODERN SPECIES		ENSAPLG00000024442	NARS2 (ENSAPLG00000005256) #8	GAB2 (ENSAPLG00000005487) #9	USP35 (ENSAPLG00000005646) #10	KCTD21 (ENSAPLG00000001767) #11	ALG8 (ENSAPLG00000005720) #12	ENSAPLG00000027987	KCTD14 (ENSAPLG00000001786) #16	ENSAPLG00000029259	INTS4 (ENSAPLG00000006018) #17	AAMDC (ENSAPLG00000006327) #18	RSF1 (ENSAPLG00000018559) #19	ENSAPLG00000006540	AQP11 (ENSAPLG00000006765) #20	ENSAPLG00000028244 #22	ENSAPLG00000006771 #22	GDPD4 (ENSAPLG00000007426) #23	MYO7A (ENSAPLG00000007675) #24	OMP (ENSAPLG00000016937) #25	CAPN5 (ENSAPLG00000009147) #26	ACER3 (ENSAPLG00000009659) #28	TSKU (ENSAPLG00000001790) #29	ENSAPLG00000009760	ENSAPLG00000009988	EMSY (ENSAPLG00000010078) #31	THAP12 (ENSAPLG00000010379) #33	WNT11 (ENSAPLG00000010439) #34	UVRAG (ENSAPLG00000010570) #35	DGAT2 (ENSAPLG00000011172) #36	MOGAT2 (ENSAPLG00000011246) #37	MAP6 (ENSAPLG00000029565)
Pink-footed goose	MODERN SPECIES	81	ENSABRG00000005009	TENM4 (ENSABRG00000004910) #7	ENSABRG00000004892	GAB2 (ENSABRG00000004871) #9	USP35 (ENSABRG00000004859) #10	KCTD21 (ENSABRG00000004855) #11	ALG8 (ENSABRG00000004842) #12	NDUFC2 (ENSABRG00000004836) #13	ENSABRG00000004830 #14	KCTD14 (ENSABRG00000004823) #16	INTS4 (ENSABRG00000004795) #17	AAMDC (ENSABRG00000004768) #18	RSF1 (ENSABRG00000004729) #19	CLNS1A (ENSABRG00000004719) #21	AQP11 (ENSABRG00000004675) #20	PAK1 (ENSABRG00000004635) #22
Phasianidae	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942.c #10	ENSGT00940000160906 #11	ENSGT00940000153733.A.c #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554.l #31	ENSGT00390000009554.k #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234601.c.a.a.g.b	ENSGT00960000189458	ENSGT00390000013075.a
Japanese quail	MODERN SPECIES		GAB2 (ENSCJPG00005004489) #9	ENSCJPG00005004490 #10	KCTD21 (ENSCJPG00005004491) #11	ALG8 (ENSCJPG00005004492) #12	NDUFC2 (ENSCJPG00005004495) #13	ENSCJPG00005004497 #14	ENSCJPG00005004498 #10	ENSCJPG00005004500 #14	ENSCJPG00005004501 #14	KCTD14 (ENSCJPG00005004503) #16	INTS4 (ENSCJPG00005004504) #17	AAMDC (ENSCJPG00005004505) #18	RSF1 (ENSCJPG00005004525) #19	CLNS1A (ENSCJPG00005004527) #21	AQP11 (ENSCJPG00005004531) #20	PAK1 (ENSCJPG00005004534) #22	GDPD4 (ENSCJPG00005004539) #23	MYO7A (ENSCJPG00005004544) #24	CAPN5 (ENSCJPG00005005240) #26	ACER3 (ENSCJPG00005005247) #28	TSKU (ENSCJPG00005005251) #29	ENSCJPG00005005254	ENSCJPG00005005269	EMSY (ENSCJPG00005005271) #31	THAP12 (ENSCJPG00005005278) #33	WNT11 (ENSCJPG00005005289) #34	UVRAG (ENSCJPG00005005291) #35	ENSCJPG00005005295	ENSCJPG00005005298	ENSCJPG00005005300	RNF121 (ENSCJPG00005005304)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942.c #10	ENSGT00940000160906 #11	ENSGT00940000153733.A.c #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.e #14	ENSGT00500000044890.a.b.f #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554.l #31	ENSGT00390000009554.k #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234601.c.a.a.g.b	ENSGT01030000234601.c.a.a.g.a.b	ENSGT01030000234601.c.a.a.g.a.a
Chicken	MODERN SPECIES		NARS2 (ENSGALG00010001903) #8	ENSGALG00010001905	GAB2 (ENSGALG00010003818) #9	USP35 (ENSGALG00010001911) #10	KCTD21 (ENSGALG00010001928) #11	ALG8 (ENSGALG00010001938) #12	NDUFC2 (ENSGALG00010001957) #13	THRSPB (ENSGALG00010003522) #14	THRSP (ENSGALG00010001976) #14	KCTD14 (ENSGALG00010001987) #16	INTS4 (ENSGALG00010001997) #17	AAMDC (ENSGALG00010002039) #18	RSF1 (ENSGALG00010002054) #19	CLNS1A (ENSGALG00010002065) #21	AQP11 (ENSGALG00010002090) #20	PAK1 (ENSGALG00010002102) #22	GDPD4 (ENSGALG00010002113) #23	MYO7A (ENSGALG00010002138) #24	CAPN5 (ENSGALG00010002160) #26	ACER3 (ENSGALG00010002211) #28	TSKU (ENSGALG00010002282) #29	ENSGALG00010002298	ENSGALG00010002312	ENSGALG00010002315 #31	ENSGALG00010003822 #31	ENSGALG00010003829 #31	ENSGALG00010002328 #31	THAP12 (ENSGALG00010002348) #33	WNT11 (ENSGALG00010002356) #34	UVRAG (ENSGALG00010002368) #35	ART7B (ENSGALG00010002377)
Turkey	MODERN SPECIES		ENSMGAG00000021073	ENSMGAG00000015623	ENSMGAG00000015273	ENSMGAG00000015272	ENSMGAG00000015269 #35	ENSMGAG00000015268 #34	ENSMGAG00000015267 #33	ENSMGAG00000015318	ENSMGAG00000015265	ENSMGAG00000015640 #29	ENSMGAG00000019989 #28	ENSMGAG00000015263 #26	ENSMGAG00000022413 #24	ENSMGAG00000015262	ENSMGAG00000015261 #23	ENSMGAG00000015260 #22	ENSMGAG00000015258	ENSMGAG00000015259 #20	ENSMGAG00000015257 #19	ENSMGAG00000015252 #14	KCTD14 (ENSMGAG00000015253) #16	ENSMGAG00000015254 #17	AAMDC (ENSMGAG00000019319) #18	ENSMGAG00000021463 #10	ENSMGAG00000015251 #10	ENSMGAG00000015250	ENSMGAG00000015249 #12	KCTD21 (ENSMGAG00000017260) #11	ENSMGAG00000018248 #12	GAB2 (ENSMGAG00000015248) #9	ENSMGAG00000015247 #8
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
tuatara	DUPLICATION
tuatara	DUPLICATION
tuatara	MODERN SPECIES	891	TENM4 (ENSSPUG00000012736) #7	ENSSPUG00000012680	NARS2 (ENSSPUG00000012642) #8	GAB2 (ENSSPUG00000012624) #9	USP35 (ENSSPUG00000012584) #10	ENSSPUG00000012557 #12	ENSSPUG00000012542 #12	NDUFC2 (ENSSPUG00000012526) #13	KCTD14 (ENSSPUG00000012507) #16	INTS4 (ENSSPUG00000012396) #17	AAMDC (ENSSPUG00000012352) #18	ENSSPUG00000012237 #19	ENSSPUG00000012176 #19	CLNS1A (ENSSPUG00000012157) #21	AQP11 (ENSSPUG00000012154) #20	ENSSPUG00000012143 #22	ENSSPUG00000012120 #22	GDPD4 (ENSSPUG00000012097) #23	MYO7A (ENSSPUG00000011932) #24	CAPN5 (ENSSPUG00000011865) #26
tuatara	MODERN SPECIES	891	ENSSPUG00000012680	NARS2 (ENSSPUG00000012642) #8	GAB2 (ENSSPUG00000012624) #9	USP35 (ENSSPUG00000012584) #10	ENSSPUG00000012557 #12	ENSSPUG00000012542 #12	NDUFC2 (ENSSPUG00000012526) #13	KCTD14 (ENSSPUG00000012507) #16	INTS4 (ENSSPUG00000012396) #17	AAMDC (ENSSPUG00000012352) #18	ENSSPUG00000012237 #19	ENSSPUG00000012176 #19	CLNS1A (ENSSPUG00000012157) #21	AQP11 (ENSSPUG00000012154) #20	ENSSPUG00000012143 #22	ENSSPUG00000012120 #22	GDPD4 (ENSSPUG00000012097) #23	MYO7A (ENSSPUG00000011932) #24	CAPN5 (ENSSPUG00000011865) #26
tuatara	MODERN SPECIES	1138	ENSSPUG00000015869	ENSSPUG00000015904	ENSSPUG00000016036	ENSSPUG00000016116	ENSSPUG00000016126	ENSSPUG00000016152	ENSSPUG00000016169	ENSSPUG00000016185	ENSSPUG00000016230	ENSSPUG00000016327	ENSSPUG00000016342	ENSSPUG00000016394	ENSSPUG00000016537	ENSSPUG00000016681	ENSSPUG00000016688	ENSSPUG00000016700 #22	PCDHAC2 (ENSSPUG00000016706)	ENSSPUG00000016719	ENSSPUG00000016730	ENSSPUG00000016764	ENSSPUG00000016796	ENSSPUG00000016832	ENSSPUG00000016890	ENSSPUG00000016931	ENSSPUG00000016947	ENSSPUG00000017001	ENSSPUG00000017005	ENSSPUG00000017025	ENSSPUG00000017049	ENSSPUG00000000027	ENSSPUG00000000239
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.j #14	ENSGT00500000044890.a.b.i #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00990000211477	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.j #14	ENSGT00500000044890.a.b.i #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00990000211477	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00390000009497 #25	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33
Lizard	MODERN SPECIES	951	KCTD21 (ENSACAG00000012466) #11	ALG8 (ENSACAG00000012469) #12	ENSACAG00000039971 #13	ENSACAG00000012500 #14	ENSACAG00000036288 #14	ENSACAG00000022766 #14	KCTD14 (ENSACAG00000007126) #16	INTS4 (ENSACAG00000001754) #17	AAMDC (ENSACAG00000001888) #18	RSF1 (ENSACAG00000001901) #19	ENSACAG00000035046 #21	ENSACAG00000029679	ENSACAG00000001960	AQP11 (ENSACAG00000022958) #20	ENSACAG00000039546	PAK1 (ENSACAG00000001968) #22	ENSACAG00000040917 #23	ENSACAG00000002220 #23	MYO7A (ENSACAG00000002274) #24	ENSACAG00000002736
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.j #14	ENSGT00500000044890.a.b.i #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22
Elapidae_a	ANCESTRAL SPECIES	41	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.j #14	ENSGT00500000044890.a.b.i #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22
Acanthophiinae	ANCESTRAL SPECIES	42	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00390000005673	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.j #14	ENSGT00500000044890.a.b.i #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00940000175310	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22
Eastern brown snake	MODERN SPECIES	33	TENM4 (ENSPTXG00000003182) #7	NARS2 (ENSPTXG00000003181) #8	GAB2 (ENSPTXG00000003179) #9	USP35 (ENSPTXG00000003178) #10	KCTD21 (ENSPTXG00000003177) #11	ALG8 (ENSPTXG00000003175) #12	ENSPTXG00000003173 #14	ENSPTXG00000003172 #14	KCTD14 (ENSPTXG00000003171) #16	INTS4 (ENSPTXG00000003170) #17	AAMDC (ENSPTXG00000003168) #18	RSF1 (ENSPTXG00000003165) #19	CLNS1A (ENSPTXG00000003163) #21	ENSPTXG00000003162	AQP11 (ENSPTXG00000003161) #20	PAK1 (ENSPTXG00000003159) #22	MOGAT2 (ENSPTXG00000003154) #37	DGAT2 (ENSPTXG00000003150) #36	UVRAG (ENSPTXG00000002550) #35	WNT11 (ENSPTXG00000002528) #34
Laterata	ANCESTRAL SPECIES	3	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000160906 #11	ENSGT00940000153733.A #12	ENSGT00390000010352 #13	ENSGT00500000044890.a.b.j #14	ENSGT00500000044890.a.b.i #14	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00990000211477	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623	ENSGT00390000009554 #31	ENSGT00530000063516.a.a #33	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093.g
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000001762 #10	ENSPMRG00000001740 #10	KCTD21 (ENSPMRG00000001728) #11	ALG8 (ENSPMRG00000001672) #12	ENSPMRG00000001658	ENSPMRG00000001650 #14	ENSPMRG00000001647 #14	ENSPMRG00000001644 #14	KCTD14 (ENSPMRG00000001636) #16	INTS4 (ENSPMRG00000001625) #17	AAMDC (ENSPMRG00000001616) #18	RSF1 (ENSPMRG00000001603) #19	CLNS1A (ENSPMRG00000001591) #21	ENSPMRG00000001579	ENSPMRG00000001565	PAK1 (ENSPMRG00000001542) #22	GDPD4 (ENSPMRG00000001524) #23	MYO7A (ENSPMRG00000001422) #24	CAPN5 (ENSPMRG00000001335) #26	TSKU (ENSPMRG00000001307) #29	ENSPMRG00000001299	ENSPMRG00000001232	ENSPMRG00000001213	EMSY (ENSPMRG00000001139) #31	THAP12 (ENSPMRG00000001070) #33	ENSPMRG00000001065	WNT11 (ENSPMRG00000001043) #34	ENSPMRG00000001026	ENSPMRG00000001018	UVRAG (ENSPMRG00000000985) #35	DGAT2 (ENSPMRG00000000955) #36
Argentine black and white tegu	MODERN SPECIES	24	ENSSMRG00000007527	TENM4 (ENSSMRG00000007475) #7	GAB2 (ENSSMRG00000007428) #9	USP35 (ENSSMRG00000007396) #10	KCTD21 (ENSSMRG00000007395) #11	ALG8 (ENSSMRG00000007393) #12	NDUFC2 (ENSSMRG00000007385) #13	ENSSMRG00000007384 #14	KCTD14 (ENSSMRG00000007360) #16	INTS4 (ENSSMRG00000007351) #17	AAMDC (ENSSMRG00000007349) #18	RSF1 (ENSSMRG00000007345) #19	CLNS1A (ENSSMRG00000007338) #21	AQP11 (ENSSMRG00000007336) #20	ENSSMRG00000007332	PAK1 (ENSSMRG00000007311) #22	GDPD4 (ENSSMRG00000007296) #23	MYO7A (ENSSMRG00000007279) #24	ENSSMRG00000007194	CAPN5 (ENSSMRG00000007186) #26	ACER3 (ENSSMRG00000007174) #28	TSKU (ENSSMRG00000007173) #29	ENSSMRG00000007152	ENSSMRG00000007128	ENSSMRG00000007124	EMSY (ENSSMRG00000007092) #31	THAP12 (ENSSMRG00000007080) #33	WNT11 (ENSSMRG00000007054) #34	ENSSMRG00000007053	UVRAG (ENSSMRG00000007022) #35	DGAT2 (ENSSMRG00000007010) #36
Anura	ANCESTRAL SPECIES	28	ENSGT00940000156875	ENSGT00940000166008	ENSGT00940000158099	ENSGT00940000154730.b	ENSGT01030000234566.e.b.b.a #7	ENSGT01030000234618.D #8	ENSGT00940000157792 #9	ENSGT00940000160942 #10	ENSGT00940000153733.A #12	ENSGT00940000160762 #16	ENSGT00390000010128 #17	ENSGT00390000011958 #18	ENSGT00530000064411 #19	ENSGT00390000010063 #21	ENSGT00530000063816.c #20	ENSGT00950000182988.a.b.a #22	ENSGT00940000156251 #23	ENSGT00940000155350 #24	ENSGT00940000156536 #26	ENSGT00730000110920.a #28	ENSGT00940000160984 #29	ENSGT00940000162702	ENSGT00940000163623.j	ENSGT00390000009554 #31	ENSGT00940000158413 #34	ENSGT00390000012877 #35	ENSGT01030000234582.f.a.b #36	ENSGT01030000234582.e.b #37	ENSGT00530000063947.C	ENSGT00940000161093	ENSGT00940000159690
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000004359	ENSLLEG00000004458	ENSLLEG00000004462	ENSLLEG00000004471	ENSLLEG00000004478	PCF11 (ENSLLEG00000004483)	ANKRD42 (ENSLLEG00000004507)	CCDC90B (ENSLLEG00000004537)	ENSLLEG00000004554	ENSLLEG00000004559	ENSLLEG00000004563	ENSLLEG00000004570	TMEM126A (ENSLLEG00000004577)	CREBZF (ENSLLEG00000004586)	ENSLLEG00000004610	PAK1 (ENSLLEG00000004734) #22	GDPD4 (ENSLLEG00000004849) #23	ENSLLEG00000004869	MYO7A (ENSLLEG00000004986) #24	CAPN5 (ENSLLEG00000006241) #26	ENSLLEG00000006318 #28	ENSLLEG00000006442	TSKU (ENSLLEG00000006460) #29	C2CD3 (ENSLLEG00000006531)	UCP2 (ENSLLEG00000007164)	ENSLLEG00000007283	ENSLLEG00000007350	ENSLLEG00000007390	ENSLLEG00000007407	ENSLLEG00000007433	P2RY6 (ENSLLEG00000007461)
Frog	MODERN SPECIES	2	pcf11 (ENSXETG00000013634)	ankrd42 (ENSXETG00000033972)	ccdc90b (ENSXETG00000013639)	dlg2 (ENSXETG00000012737)	ENSXETG00000045322	ENSXETG00000041747	ENSXETG00000038687	tmem126a (ENSXETG00000012738)	CREBZF (ENSXETG00000037796)	ENSXETG00000045431	sytl2 (ENSXETG00000012793)	CCDC83 (ENSXETG00000010700)	ENSXETG00000042352	picalm (ENSXETG00000032563)	aqp11 (ENSXETG00000030889) #20	pak1 (ENSXETG00000010703) #22	XB877238 [provisional:gdpd5] (ENSXETG00000046669) #23	myo7a (ENSXETG00000010706) #24	p2ry2 (ENSXETG00000039207)	ENSXETG00000010725	rps3 (ENSXETG00000010729)	ENSXETG00000010732	fchsd2 (ENSXETG00000010734)	ENSXETG00000036724	gdpd5 (ENSXETG00000015053)	ENSXETG00000044887	ENSXETG00000025318	map6 (ENSXETG00000015061)	mogat2.2 (ENSXETG00000015062) #37	dgat2 (ENSXETG00000025317) #36	uvrag (ENSXETG00000015063) #35
Coelacanth	MODERN SPECIES	1526												AAMDC (ENSLACG00000001389) #18	RSF1 (ENSLACG00000002272) #19	CLNS1A (ENSLACG00000005275) #21	AQP11 (ENSLACG00000006500) #20	pak1 (ENSLACG00000007848) #22