Theria	ANCESTRAL SPECIES	4	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000164965	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Primates	ANCESTRAL SPECIES	5	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.f	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.cb.b.a	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.f	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.cb.b.a	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00470000042299 #7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.cb.b.a	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.y #36
Bolivian squirrel monkey	MODERN SPECIES	49	TREM1 (ENSSBOG00000022642) #7	NCR2 (ENSSBOG00000001345) #8	FOXP4 (ENSSBOG00000031733) #9	MDFI (ENSSBOG00000025433) #10	TFEB (ENSSBOG00000030350) #11	PGC (ENSSBOG00000024240) #12	FRS3 (ENSSBOG00000034869) #13	PRICKLE4 (ENSSBOG00000018251) #14	USP49 (ENSSBOG00000000054) #15	MED20 (ENSSBOG00000028787) #16	BYSL (ENSSBOG00000034517) #17	CCND3 (ENSSBOG00000021250) #18	TAF8 (ENSSBOG00000025407) #19	C6orf132 (ENSSBOG00000023219) #20	ENSSBOG00000028532 #21	GUCA1A (ENSSBOG00000031079) #22	GUCA1B (ENSSBOG00000034300) #23	MRPS10 (ENSSBOG00000022651) #24	ENSSBOG00000020519 #25	TRERF1 (ENSSBOG00000030453) #26	UBR2 (ENSSBOG00000032257) #27	PRPH2 (ENSSBOG00000022403) #28	BICRAL (ENSSBOG00000033360) #29	PTCRA (ENSSBOG00000025093) #30	CNPY3 (ENSSBOG00000035845) #31	GNMT (ENSSBOG00000023382) #32	PEX6 (ENSSBOG00000021202) #33	ENSSBOG00000020796 #34	PPP2R5D (ENSSBOG00000033250) #35	ENSSBOG00000000614 #36	KLHDC3 (ENSSBOG00000023705) #37
Capuchin	MODERN SPECIES	197	NCR2 (ENSCCAG00000018571) #8	FOXP4 (ENSCCAG00000021468) #9	MDFI (ENSCCAG00000021635) #10	TFEB (ENSCCAG00000036755) #11	PGC (ENSCCAG00000032433) #12	FRS3 (ENSCCAG00000023089) #13	PRICKLE4 (ENSCCAG00000035589) #14	USP49 (ENSCCAG00000035356) #15	MED20 (ENSCCAG00000025677) #16	BYSL (ENSCCAG00000036583) #17	CCND3 (ENSCCAG00000023865) #18	ENSCCAG00000032788	TAF8 (ENSCCAG00000019516) #19	C6orf132 (ENSCCAG00000020133) #20	GUCA1ANB (ENSCCAG00000036979) #21	GUCA1A (ENSCCAG00000034483) #22	GUCA1B (ENSCCAG00000034846) #23	MRPS10 (ENSCCAG00000037430) #24	TRERF1 (ENSCCAG00000037441) #26	UBR2 (ENSCCAG00000027347) #27	PRPH2 (ENSCCAG00000035220) #28	BICRAL (ENSCCAG00000022238) #29	ENSCCAG00000026245	C6orf226 (ENSCCAG00000028662)	PTCRA (ENSCCAG00000027445) #30	CNPY3 (ENSCCAG00000031450) #31	PEX6 (ENSCCAG00000029488) #33	GNMT (ENSCCAG00000035170) #32	PPP2R5D (ENSCCAG00000021529) #35	ENSCCAG00000032843 #36	KLHDC3 (ENSCCAG00000003365) #37
Marmoset	MODERN SPECIES	16	TFEB (ENSCJAG00000004199) #11	PGC (ENSCJAG00000004226) #12	FRS3 (ENSCJAG00000004240) #13	PRICKLE4 (ENSCJAG00000004246) #14	ENSCJAG00000081865	USP49 (ENSCJAG00000004251) #15	MED20 (ENSCJAG00000004259) #16	BYSL (ENSCJAG00000004266) #17	CCND3 (ENSCJAG00000004284) #18	ENSCJAG00000084284	ENSCJAG00000070491	ENSCJAG00000083522	TAF8 (ENSCJAG00000004292) #19	C6orf132 (ENSCJAG00000039441) #20	GUCA1ANB (ENSCJAG00000042922) #21	GUCA1A (ENSCJAG00000004301) #22	GUCA1B (ENSCJAG00000070620) #23	MRPS10 (ENSCJAG00000075253) #24	TRERF1 (ENSCJAG00000004347) #26	UBR2 (ENSCJAG00000004399) #27	PRPH2 (ENSCJAG00000004580) #28	ENSCJAG00000074599	BICRAL (ENSCJAG00000004594) #29	ENSCJAG00000004637	C6orf226 (ENSCJAG00000023341)	ENSCJAG00000086222	CNPY3 (ENSCJAG00000004662) #31	GNMT (ENSCJAG00000004675) #32	PEX6 (ENSCJAG00000004684) #33	PPP2R5D (ENSCJAG00000004782) #35	MEA1 (ENSCJAG00000004894) #36
Mas night monkey	MODERN SPECIES	882	FOXP4 (ENSANAG00000029480) #9	MDFI (ENSANAG00000031928) #10	TFEB (ENSANAG00000035745) #11	PGC (ENSANAG00000033780) #12	FRS3 (ENSANAG00000020838) #13	PRICKLE4 (ENSANAG00000019187) #14	TOMM6 (ENSANAG00000032387)	USP49 (ENSANAG00000021297) #15	MED20 (ENSANAG00000030569) #16	BYSL (ENSANAG00000036138) #17	CCND3 (ENSANAG00000027461) #18	TAF8 (ENSANAG00000027075) #19	ENSANAG00000019684	C6orf132 (ENSANAG00000027834) #20	GUCA1ANB (ENSANAG00000021488) #21	GUCA1A (ENSANAG00000019979) #22	GUCA1B (ENSANAG00000037665) #23	MRPS10 (ENSANAG00000034917) #24	ENSANAG00000038064 #25	TRERF1 (ENSANAG00000024278) #26	ENSANAG00000022408	UBR2 (ENSANAG00000029753) #27	PRPH2 (ENSANAG00000023340) #28	BICRAL (ENSANAG00000036073) #29	ENSANAG00000024167	PTCRA (ENSANAG00000025975) #30	CNPY3 (ENSANAG00000023982) #31	GNMT (ENSANAG00000021291) #32	PEX6 (ENSANAG00000032772) #33	ENSANAG00000033080 #36	PPP2R5D (ENSANAG00000036851) #35
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00910000147470	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00440000034488	ENSGT00950000182878.b.b.`b.a.b.a.a	ENSGT00390000007712 #30
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00910000147470	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00910000147470	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691.c.a #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00500000045496	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00910000147470	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31
Gorilla	MODERN SPECIES	19	FOXP4 (ENSGGOG00000016376) #9	MDFI (ENSGGOG00000002680) #10	TFEB (ENSGGOG00000002683) #11	PGC (ENSGGOG00000002688) #12	FRS3 (ENSGGOG00000002694) #13	PRICKLE4 (ENSGGOG00000015385) #14	ENSGGOG00000015382	USP49 (ENSGGOG00000016566) #15	ENSGGOG00000023029	MED20 (ENSGGOG00000016233) #16	BYSL (ENSGGOG00000027046) #17	ENSGGOG00000040409	CCND3 (ENSGGOG00000015161) #18	TAF8 (ENSGGOG00000011576) #19	C6orf132 (ENSGGOG00000042541) #20	GUCA1A (ENSGGOG00000012797) #22	GUCA1B (ENSGGOG00000012800) #23	MRPS10 (ENSGGOG00000012808) #24	TRERF1 (ENSGGOG00000012813) #26	ENSGGOG00000036848 #25	ENSGGOG00000025880	UBR2 (ENSGGOG00000004079) #27	ENSGGOG00000038464	PRPH2 (ENSGGOG00000004097) #28	ENSGGOG00000040007	TBCC (ENSGGOG00000005896)	BICRAL (ENSGGOG00000017090) #29	ENSGGOG00000009958	C6orf226 (ENSGGOG00000009956)	PTCRA (ENSGGOG00000001370) #30	CNPY3 (ENSGGOG00000001373) #31
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691.c.a #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00500000045496	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00950000183105.A.m.b	ENSGT00390000006845 #32
Pan	ANCESTRAL SPECIES	5	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691.c.a #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00500000045496	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.b.c	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00950000183105.A.m.b	ENSGT00390000006845 #32
Bonobo	MODERN SPECIES	19	NCR2 (ENSPPAG00000023463) #8	FOXP4 (ENSPPAG00000040751) #9	MDFI (ENSPPAG00000037978) #10	TFEB (ENSPPAG00000038219) #11	PGC (ENSPPAG00000043009) #12	FRS3 (ENSPPAG00000041989) #13	PRICKLE4 (ENSPPAG00000035806) #14	USP49 (ENSPPAG00000018338) #15	ENSPPAG00000005179	MED20 (ENSPPAG00000033578) #16	BYSL (ENSPPAG00000028063) #17	CCND3 (ENSPPAG00000028061) #18	ENSPPAG00000003755 #19	C6orf132 (ENSPPAG00000029653) #20	GUCA1ANB (ENSPPAG00000041508) #21	GUCA1A (ENSPPAG00000038612) #22	GUCA1B (ENSPPAG00000028630) #23	MRPS10 (ENSPPAG00000041229) #24	TRERF1 (ENSPPAG00000032564) #26	ENSPPAG00000000666	UBR2 (ENSPPAG00000028429) #27	ENSPPAG00000041554	PRPH2 (ENSPPAG00000035254) #28	TBCC (ENSPPAG00000005383)	BICRAL (ENSPPAG00000041829) #29	ENSPPAG00000028326	C6orf226 (ENSPPAG00000021377)	PTCRA (ENSPPAG00000039945) #30	CNPY3 (ENSPPAG00000036349) #31	GNMT (ENSPPAG00000000924) #32	PEX6 (ENSPPAG00000036556) #33
Chimpanzee	MODERN SPECIES	19	FOXP4 (ENSPTRG00000018155) #9	MDFI (ENSPTRG00000018156) #10	TFEB (ENSPTRG00000018157) #11	PGC (ENSPTRG00000018158) #12	FRS3 (ENSPTRG00000018159) #13	ENSPTRG00000018160 #14	TOMM6 (ENSPTRG00000034313)	ENSPTRG00000043479 #15	ENSPTRG00000044058	MED20 (ENSPTRG00000018162) #16	BYSL (ENSPTRG00000018163) #17	CCND3 (ENSPTRG00000018164) #18	TAF8 (ENSPTRG00000018165) #19	C6H6orf132 (ENSPTRG00000018166) #20	GUCA1ANB (ENSPTRG00000044074) #21	GUCA1A (ENSPTRG00000018167) #22	GUCA1B (ENSPTRG00000018168) #23	MRPS10 (ENSPTRG00000018169) #24	TRERF1 (ENSPTRG00000018170) #26	ENSPTRG00000048021 #25	ENSPTRG00000044341	UBR2 (ENSPTRG00000018171) #27	ENSPTRG00000043287	PRPH2 (ENSPTRG00000018172) #28	TBCC (ENSPTRG00000018173)	BICRAL (ENSPTRG00000018174) #29	RPL7L1 (ENSPTRG00000018175)	PTCRA (ENSPTRG00000018176) #30	CNPY3 (ENSPTRG00000018177) #31	ENSPTRG00000029670	GNMT (ENSPTRG00000018178) #32
Human	MODERN SPECIES	18	FOXP4 (ENSG00000137166) #9	MDFI (ENSG00000112559) #10	TFEB (ENSG00000112561) #11	PGC (ENSG00000096088) #12	FRS3 (ENSG00000137218) #13	PRICKLE4 (ENSG00000278224) #14	TOMM6 (ENSG00000214736)	USP49 (ENSG00000164663) #15	MED20 (ENSG00000124641) #16	BYSL (ENSG00000112578) #17	CCND3 (ENSG00000112576) #18	TAF8 (ENSG00000137413) #19	C6orf132 (ENSG00000188112) #20	GUCA1ANB (ENSG00000287363) #21	ENSG00000290147	GUCA1A (ENSG00000048545) #22	GUCA1B (ENSG00000112599) #23	MRPS10 (ENSG00000048544) #24	TRERF1 (ENSG00000124496) #26	UBR2 (ENSG00000024048) #27	PRPH2 (ENSG00000112619) #28	TBCC (ENSG00000124659)	BICRAL (ENSG00000112624) #29	RPL7L1 (ENSG00000146223)	C6orf226 (ENSG00000221821)	PTCRA (ENSG00000171611) #30	CNPY3 (ENSG00000137161) #31	GNMT (ENSG00000124713) #32	PEX6 (ENSG00000124587) #33	PPP2R5D (ENSG00000112640) #35	MEA1 (ENSG00000124733) #36
Orangutan	MODERN SPECIES	19	NCR2 (ENSPPYG00000016594) #8	FOXP4 (ENSPPYG00000016596) #9	MDFI (ENSPPYG00000016598) #10	TFEB (ENSPPYG00000016599) #11	PGC (ENSPPYG00000016601) #12	FRS3 (ENSPPYG00000016602) #13	PRICKLE4 (ENSPPYG00000016603) #14	TOMM6 (ENSPPYG00000033566)	USP49 (ENSPPYG00000016604) #15	MED20 (ENSPPYG00000016606) #16	BYSL (ENSPPYG00000017273) #17	CCND3 (ENSPPYG00000016607) #18	ENSPPYG00000016608 #19	ENSPPYG00000039497 #20	ENSPPYG00000033111	GUCA1A (ENSPPYG00000016611) #22	GUCA1ANB (ENSPPYG00000037366) #21	GUCA1B (ENSPPYG00000016612) #23	MRPS10 (ENSPPYG00000016613) #24	TRERF1 (ENSPPYG00000016614) #26	ENSPPYG00000034248	UBR2 (ENSPPYG00000016616) #27	PRPH2 (ENSPPYG00000016617) #28	TBCC (ENSPPYG00000017265)	BICRAL (ENSPPYG00000016618) #29	RPL7L1 (ENSPPYG00000016619)	C6orf226 (ENSPPYG00000016620)	PTCRA (ENSPPYG00000016621) #30	CNPY3 (ENSPPYG00000016622) #31	GNMT (ENSPPYG00000016623) #32	PEX6 (ENSPPYG00000016624) #33
Gibbon	MODERN SPECIES	7	TREM1 (ENSNLEG00000004985) #7	NCR2 (ENSNLEG00000004974) #8	FOXP4 (ENSNLEG00000004944) #9	MDFI (ENSNLEG00000004930) #10	TFEB (ENSNLEG00000004906) #11	PGC (ENSNLEG00000004884) #12	FRS3 (ENSNLEG00000004879) #13	PRICKLE4 (ENSNLEG00000004869) #14	ENSNLEG00000036075	USP49 (ENSNLEG00000004859) #15	MED20 (ENSNLEG00000004855) #16	BYSL (ENSNLEG00000032809) #17	ENSNLEG00000030583 #18	ENSNLEG00000004816 #19	ENSNLEG00000004814 #20	GUCA1A (ENSNLEG00000004806) #22	GUCA1B (ENSNLEG00000004802) #23	MRPS10 (ENSNLEG00000028148) #24	ENSNLEG00000032537 #25	TRERF1 (ENSNLEG00000004772) #26	UBR2 (ENSNLEG00000004697) #27	ENSNLEG00000030955	PRPH2 (ENSNLEG00000004689) #28	ENSNLEG00000034657	BICRAL (ENSNLEG00000004660) #29	RPL7L1 (ENSNLEG00000004649)	PTCRA (ENSNLEG00000028066) #30	CNPY3 (ENSNLEG00000004627) #31	GNMT (ENSNLEG00000030090) #32	ENSNLEG00000004606 #33	PPP2R5D (ENSNLEG00000004508) #35
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00910000147470	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a	ENSGT00440000034488	ENSGT00950000182878.b.b.`b.b	ENSGT00390000007712 #30
Rhinopithecus	ANCESTRAL SPECIES	26	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000164010	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00910000147470	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.c.b.a	ENSGT00950000182878.b.b.`b.a.b.a.a.c.a	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33
Black snub-nosed monkey	MODERN SPECIES	593	NCR2 (ENSRBIG00000040162) #8	FOXP4 (ENSRBIG00000032681) #9	MDFI (ENSRBIG00000041804) #10	TFEB (ENSRBIG00000007714) #11	PGC (ENSRBIG00000038339) #12	FRS3 (ENSRBIG00000031884) #13	ENSRBIG00000035540	PRICKLE4 (ENSRBIG00000034766) #14	USP49 (ENSRBIG00000040256) #15	MED20 (ENSRBIG00000025814) #16	BYSL (ENSRBIG00000030183) #17	CCND3 (ENSRBIG00000037954) #18	TAF8 (ENSRBIG00000040154) #19	C6orf132 (ENSRBIG00000040715) #20	GUCA1ANB (ENSRBIG00000033615) #21	GUCA1A (ENSRBIG00000037690) #22	GUCA1B (ENSRBIG00000038802) #23	MRPS10 (ENSRBIG00000034975) #24	ENSRBIG00000033519 #25	TRERF1 (ENSRBIG00000030162) #26	UBR2 (ENSRBIG00000039033) #27	PRPH2 (ENSRBIG00000043861) #28	TBCC (ENSRBIG00000003966)	BICRAL (ENSRBIG00000038859) #29	ENSRBIG00000041359	PTCRA (ENSRBIG00000008300) #30	CNPY3 (ENSRBIG00000044857) #31	GNMT (ENSRBIG00000044856) #32	PEX6 (ENSRBIG00000027362) #33	PPP2R5D (ENSRBIG00000026732) #35	MEA1 (ENSRBIG00000010906) #36
Golden snub-nosed monkey	MODERN SPECIES	1467			FOXP4 (ENSRROG00000043394) #9	MDFI (ENSRROG00000041646) #10	TFEB (ENSRROG00000041699) #11	PGC (ENSRROG00000040601) #12	FRS3 (ENSRROG00000033640) #13	PRICKLE4 (ENSRROG00000045503) #14	ENSRROG00000025822	USP49 (ENSRROG00000033334) #15	MED20 (ENSRROG00000044839) #16	ENSRROG00000007843 #17	CCND3 (ENSRROG00000041189) #18	TAF8 (ENSRROG00000039649) #19	ENSRROG00000039784	GUCA1A (ENSRROG00000040214) #22	GUCA1B (ENSRROG00000035220) #23	ENSRROG00000006915 #24	TRERF1 (ENSRROG00000045116) #26	ENSRROG00000038573 #25	UBR2 (ENSRROG00000041345) #27	PRPH2 (ENSRROG00000042494) #28	ENSRROG00000035811	TBCC (ENSRROG00000027064)	BICRAL (ENSRROG00000041230) #29	ENSRROG00000033394	PTCRA (ENSRROG00000023789) #30	CNPY3 (ENSRROG00000044230) #31	GNMT (ENSRROG00000042667) #32	PEX6 (ENSRROG00000034659) #33	PPP2R5D (ENSRROG00000041590) #35
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.h	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.b.b	ENSGT00440000034488	ENSGT00950000182878.b.b.`b.b.a	ENSGT00390000007712 #30	ENSGT00390000014072.A #31
Vervet Monkey	MODERN SPECIES	8	TREM1 (ENSCSAG00000011258) #7	FOXP4 (ENSCSAG00000011262) #9	MDFI (ENSCSAG00000011270) #10	TFEB (ENSCSAG00000011274) #11	PGC (ENSCSAG00000011279) #12	FRS3 (ENSCSAG00000011283) #13	PRICKLE4 (ENSCSAG00000011286) #14	TOMM6 (ENSCSAG00000011289)	USP49 (ENSCSAG00000011293) #15	MED20 (ENSCSAG00000011299) #16	BYSL (ENSCSAG00000011306) #17	CCND3 (ENSCSAG00000011312) #18	TAF8 (ENSCSAG00000011346) ##19	C6orf132 (ENSCSAG00000011367) #20	GUCA1ANB (ENSCSAG00000011377) #21	GUCA1A (ENSCSAG00000011389) #22	GUCA1B (ENSCSAG00000011404) #23	MRPS10 (ENSCSAG00000011412) #24	TRERF1 (ENSCSAG00000011422) #26	UBR2 (ENSCSAG00000011442) #27	PRPH2 (ENSCSAG00000011454) #28	ENSCSAG00000019300	BICRAL (ENSCSAG00000011469) #29	ENSCSAG00000011487	PTCRA (ENSCSAG00000011495) #30	CNPY3 (ENSCSAG00000011504) #31	GNMT (ENSCSAG00000011512) #32	PEX6 (ENSCSAG00000011522) #33	PPP2R5D (ENSCSAG00000011537) #35	MEA1 (ENSCSAG00000011526) #36	KLHDC3 (ENSCSAG00000011545) #37
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.h	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00550000074873.b	ENSGT00940000154400.a.b	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.b.b	ENSGT00440000034488	ENSGT00950000182878.b.b.`b.b.a
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.h	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00550000074873.b	ENSGT00940000154400.a.b	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Pig-tailed macaque	MODERN SPECIES	157	TREM1 (ENSMNEG00000006419) #7	NCR2 (ENSMNEG00000044377) #8	FOXP4 (ENSMNEG00000002954) #9	MDFI (ENSMNEG00000036442) #10	TFEB (ENSMNEG00000036203) #11	PGC (ENSMNEG00000028197) #12	FRS3 (ENSMNEG00000023654) #13	ENSMNEG00000037078	PRICKLE4 (ENSMNEG00000037818) #14	USP49 (ENSMNEG00000043085) #15	BYSL (ENSMNEG00000043045) #17	CCND3 (ENSMNEG00000037933) #18	TAF8 (ENSMNEG00000037201) #19	C6orf132 (ENSMNEG00000031453) #20	GUCA1ANB (ENSMNEG00000030746) #21	GUCA1A (ENSMNEG00000032487) #22	GUCA1B (ENSMNEG00000039223) #23	MRPS10 (ENSMNEG00000041503) #24	TRERF1 (ENSMNEG00000042787) #26	UBR2 (ENSMNEG00000044587) #27	PRPH2 (ENSMNEG00000042503) #28	ENSMNEG00000000026	ENSMNEG00000029388	TBCC (ENSMNEG00000029588)	BICRAL (ENSMNEG00000038559) #29	ENSMNEG00000033812	PTCRA (ENSMNEG00000033559) #30	CNPY3 (ENSMNEG00000044020) #31	GNMT (ENSMNEG00000036639) #32	PEX6 (ENSMNEG00000039925) #33	PPP2R5D (ENSMNEG00000034227) #35
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.h	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000166143.A.a.b.a.b.a.a.a.b	ENSGT00940000157303 #28	ENSGT00550000074873.b	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.b.b	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Crab-eating macaque	MODERN SPECIES	14	MDFI (ENSMFAG00000004961) #10	TFEB (ENSMFAG00000040195) #11	PGC (ENSMFAG00000038363) #12	FRS3 (ENSMFAG00000037819) #13	PRICKLE4 (ENSMFAG00000034421) #14	TOMM6 (ENSMFAG00000028918)	MED20 (ENSMFAG00000057486) #16	BYSL (ENSMFAG00000033214) #17	USP49 (ENSMFAG00000040586) #15	CCND3 (ENSMFAG00000039022) #18	ENSMFAG00000048664	TAF8 (ENSMFAG00000037574) #19	ENSMFAG00000044246	ENSMFAG00000065376	ENSMFAG00000003087 #21	GUCA1A (ENSMFAG00000035647) #22	GUCA1B (ENSMFAG00000031539) #23	MRPS10 (ENSMFAG00000046129) #24	ENSMFAG00000061896	TRERF1 (ENSMFAG00000045736) #26	UBR2 (ENSMFAG00000041378) #27	ENSMFAG00000063980	PRPH2 (ENSMFAG00000037918) #28	TBCC (ENSMFAG00000003179)	BICRAL (ENSMFAG00000001446) #29	ENSMFAG00000054119	RPL7L1 (ENSMFAG00000053469)	CNPY3 (ENSMFAG00000030669) #31	GNMT (ENSMFAG00000045063) #32	PEX6 (ENSMFAG00000034586) #33	PPP2R5D (ENSMFAG00000040153) #35
Rhesus	MODERN SPECIES	14	TREM1 (ENSMMUG00000003674) #7	NCR2 (ENSMMUG00000003675) #8	ENSMMUG00000063258	FOXP4 (ENSMMUG00000019985) #9	MDFI (ENSMMUG00000009449) #10	TFEB (ENSMMUG00000004690) #11	PGC (ENSMMUG00000048466) #12	FRS3 (ENSMMUG00000012417) #13	PRICKLE4 (ENSMMUG00000012419) #14	USP49 (ENSMMUG00000012421) #15	BYSL (ENSMMUG00000004416) #17	CCND3 (ENSMMUG00000004419) #18	TAF8 (ENSMMUG00000012470) #19	C4H6orf132 (ENSMMUG00000042009) #20	GUCA1ANB (ENSMMUG00000047592) #21	GUCA1A (ENSMMUG00000000872) #22	GUCA1B (ENSMMUG00000003999) #23	TRERF1 (ENSMMUG00000005575) #26	UBR2 (ENSMMUG00000005675) #27	ENSMMUG00000059702	PRPH2 (ENSMMUG00000057019) #28	ENSMMUG00000005679	TBCC (ENSMMUG00000001305)	BICRAL (ENSMMUG00000029682) #29	ENSMMUG00000053755	RPL7L1 (ENSMMUG00000021313)	ENSMMUG00000056117	PTCRA (ENSMMUG00000000460) #30	CNPY3 (ENSMMUG00000058425) #31	GNMT (ENSMMUG00000001393) #32	PEX6 (ENSMMUG00000001394) #33
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.h	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00570000081157	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00550000074873.b	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.b.b	ENSGT00440000034488	ENSGT00950000182878.b.b.`b.b.a	ENSGT00390000007712 #30
Olive baboon	MODERN SPECIES	16	NCR2 (ENSPANG00000007120) #8	FOXP4 (ENSPANG00000018703) #9	MDFI (ENSPANG00000021605) #10	TFEB (ENSPANG00000009713) #11	PGC (ENSPANG00000001300) #12	FRS3 (ENSPANG00000017337) #13	PRICKLE4 (ENSPANG00000017338) #14	TOMM6 (ENSPANG00000048754)	USP49 (ENSPANG00000018044) #15	MED20 (ENSPANG00000021506) #16	BYSL (ENSPANG00000041019) #17	CCND3 (ENSPANG00000022611) #18	TAF8 (ENSPANG00000016963) #19	C6orf132 (ENSPANG00000040893) #20	GUCA1ANB (ENSPANG00000021577) #21	GUCA1A (ENSPANG00000042377) #22	GUCA1B (ENSPANG00000024034) #23	MRPS10 (ENSPANG00000037120) #24	TRERF1 (ENSPANG00000009451) #26	ENSPANG00000047444	UBR2 (ENSPANG00000011151) #27	PRPH2 (ENSPANG00000018347) #28	ENSPANG00000049589	TBCC (ENSPANG00000025697)	BICRAL (ENSPANG00000009449) #29	ENSPANG00000008439	CNPY3 (ENSPANG00000022346) #31	GNMT (ENSPANG00000022693) #32	PEX6 (ENSPANG00000024222) #33	PPP2R5D (ENSPANG00000000811) #35	MEA1 (ENSPANG00000019151) #36
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00470000042299 #7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.h	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00910000146996 #25	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00910000147272	ENSGT00940000157303 #28	ENSGT00550000074873.b	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.`b.a.b.a.a.b.b	ENSGT00440000034488	ENSGT00950000182878.b.b.`b.b.a	ENSGT00390000007712 #30	ENSGT00390000014072.A #31
Drill	MODERN SPECIES	941	TREML4 (ENSMLEG00000039592) ##8	TREM1 (ENSMLEG00000041815) #7	NCR2 (ENSMLEG00000027560) #8	FOXP4 (ENSMLEG00000033865) #9	MDFI (ENSMLEG00000021176) #10	TFEB (ENSMLEG00000041677) #11	PGC (ENSMLEG00000041884) #12	FRS3 (ENSMLEG00000040977) #13	PRICKLE4 (ENSMLEG00000033069) #14	USP49 (ENSMLEG00000035163) #15	MED20 (ENSMLEG00000030141) #16	BYSL (ENSMLEG00000041724) #17	CCND3 (ENSMLEG00000033797) #18	TAF8 (ENSMLEG00000038495) #19	ENSMLEG00000041017	GUCA1A (ENSMLEG00000031232) #22	GUCA1B (ENSMLEG00000038572) #23	MRPS10 (ENSMLEG00000043959) #24	TRERF1 (ENSMLEG00000029158) #26	ENSMLEG00000041021 #25	UBR2 (ENSMLEG00000037649) #27	ENSMLEG00000003629	PRPH2 (ENSMLEG00000011503) #28	ENSMLEG00000008554	ENSMLEG00000041725	TBCC (ENSMLEG00000027536)	BICRAL (ENSMLEG00000041527) #29	ENSMLEG00000031121	C6orf226 (ENSMLEG00000037518)	PTCRA (ENSMLEG00000000514) #30	CNPY3 (ENSMLEG00000039009) #31
Sooty mangabey	MODERN SPECIES	97	TREM1 (ENSCATG00000041267) #7	ENSCATG00000042883	FOXP4 (ENSCATG00000025254) #9	MDFI (ENSCATG00000041056) #10	TFEB (ENSCATG00000033076) #11	PGC (ENSCATG00000036246) #12	FRS3 (ENSCATG00000039323) #13	TOMM6 (ENSCATG00000018370)	PRICKLE4 (ENSCATG00000043769) #14	USP49 (ENSCATG00000032171) #15	MED20 (ENSCATG00000020950) #16	BYSL (ENSCATG00000039266) #17	CCND3 (ENSCATG00000041451) #18	TAF8 (ENSCATG00000042087) #19	C6orf132 (ENSCATG00000040847) #20	GUCA1A (ENSCATG00000012463) #22	GUCA1B (ENSCATG00000029212) #23	MRPS10 (ENSCATG00000042431) #24	ENSCATG00000042305 #25	TRERF1 (ENSCATG00000036003) #26	UBR2 (ENSCATG00000040694) #27	PRPH2 (ENSCATG00000042372) #28	ENSCATG00000030417	TBCC (ENSCATG00000043033)	BICRAL (ENSCATG00000033374) #29	ENSCATG00000032231	PTCRA (ENSCATG00000041373) #30	CNPY3 (ENSCATG00000033357) #31	GNMT (ENSCATG00000032921) #32	PEX6 (ENSCATG00000037838) #33	PPP2R5D (ENSCATG00000039686) #35
Tarsier	MODERN SPECIES	5193	FOXP4 (ENSTSYG00000030741) #9	MDFI (ENSTSYG00000006245) #10	TFEB (ENSTSYG00000030287) #11	PGC (ENSTSYG00000031976) #12	FRS3 (ENSTSYG00000001230) #13	PRICKLE4 (ENSTSYG00000037133) #14	TOMM6 (ENSTSYG00000036201)	USP49 (ENSTSYG00000014109) #15	MED20 (ENSTSYG00000008567) #16	BYSL (ENSTSYG00000029904) #17	CCND3 (ENSTSYG00000001391) #18	ENSTSYG00000036050	TAF8 (ENSTSYG00000007576) #19	ENSTSYG00000008103	GUCA1ANB (ENSTSYG00000034451) #21	GUCA1A (ENSTSYG00000029875) #22	GUCA1B (ENSTSYG00000006949) #23	MRPS10 (ENSTSYG00000028450) #24	TRERF1 (ENSTSYG00000003874) #26	UBR2 (ENSTSYG00000011535) #27	PRPH2 (ENSTSYG00000011558) #28	SRCIN1 (ENSTSYG00000033236)
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000168448	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.w.b.a.b	ENSGT00940000167232	ENSGT00950000182878.b.b.w.a	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Mouse lemur	MODERN SPECIES	28	ENSMICG00000042409	NCR2 (ENSMICG00000013695) #8	FOXP4 (ENSMICG00000036858) #9	MDFI (ENSMICG00000015669) #10	TFEB (ENSMICG00000015674) #11	ENSMICG00000041517 #12	FRS3 (ENSMICG00000006286) #13	PRICKLE4 (ENSMICG00000015699) #14	TOMM6 (ENSMICG00000047932)	USP49 (ENSMICG00000033911) #15	BYSL (ENSMICG00000011347) #17	CCND3 (ENSMICG00000027138) #18	ENSMICG00000011353 #19	ENSMICG00000044021	GUCA1ANB (ENSMICG00000029430) #21	GUCA1A (ENSMICG00000011368) #22	GUCA1B (ENSMICG00000047497) #23	MRPS10 (ENSMICG00000011379) #24	TRERF1 (ENSMICG00000011387) #26	ENSMICG00000044890	UBR2 (ENSMICG00000003745) #27	PRPH2 (ENSMICG00000044138) #28	BICRAL (ENSMICG00000003774) #29	ENSMICG00000047101	ENSMICG00000003791	PTCRA (ENSMICG00000008212) #30	ENSMICG00000036185	CNPY3 (ENSMICG00000042564) #31	GNMT (ENSMICG00000008225) #32	PEX6 (ENSMICG00000008232) #33	ENSMICG00000008241 #35
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567.f #19	ENSGT00940000168448	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.w.a.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Greater bamboo lemur	MODERN SPECIES	305	FOXP4 (ENSPSMG00000015073) #9	MDFI (ENSPSMG00000015258) #10	TFEB (ENSPSMG00000015301) #11	PGC (ENSPSMG00000015312) #12	FRS3 (ENSPSMG00000015327) #13	PRICKLE4 (ENSPSMG00000015341) #14	ENSPSMG00000015344	USP49 (ENSPSMG00000015351) #15	ENSPSMG00000015365	MED20 (ENSPSMG00000015394) #16	BYSL (ENSPSMG00000015433) #17	CCND3 (ENSPSMG00000015483) #18	TAF8 (ENSPSMG00000015571) #19	ENSPSMG00000015586	GUCA1ANB (ENSPSMG00000015588) #21	GUCA1A (ENSPSMG00000015595) #22	GUCA1B (ENSPSMG00000015611) #23	MRPS10 (ENSPSMG00000015628) #24	TRERF1 (ENSPSMG00000015749) #26	ENSPSMG00000015803	ENSPSMG00000015807	UBR2 (ENSPSMG00000016053) #27	PRPH2 (ENSPSMG00000016187) #28	TBCC (ENSPSMG00000016192)	BICRAL (ENSPSMG00000016204) #29	ENSPSMG00000016210	CNPY3 (ENSPSMG00000016229) #31	GNMT (ENSPSMG00000016245) #32	PEX6 (ENSPSMG00000016272) #33	PPP2R5D (ENSPSMG00000016658) #35	MEA1 (ENSPSMG00000016795) #36
Coquerels sifaka	MODERN SPECIES	209	NCR2 (ENSPCOG00000008841) #8	FOXP4 (ENSPCOG00000024346) #9	MDFI (ENSPCOG00000021967) #10	TFEB (ENSPCOG00000006243) #11	PGC (ENSPCOG00000028478) #12	FRS3 (ENSPCOG00000010536) #13	PRICKLE4 (ENSPCOG00000014324) #14	TOMM6 (ENSPCOG00000000127)	USP49 (ENSPCOG00000026508) #15	MED20 (ENSPCOG00000014401) #16	ENSPCOG00000020727 #17	ENSPCOG00000022903 #18	TAF8 (ENSPCOG00000024880) #19	ENSPCOG00000021266	GUCA1ANB (ENSPCOG00000023632) #21	GUCA1A (ENSPCOG00000028552) #22	GUCA1B (ENSPCOG00000026339) #23	MRPS10 (ENSPCOG00000023681) #24	TRERF1 (ENSPCOG00000014905) #26	ENSPCOG00000022503 #27	PRPH2 (ENSPCOG00000018870) #28	BICRAL (ENSPCOG00000025959) #29	ENSPCOG00000014928	PTCRA (ENSPCOG00000021697) #30	CNPY3 (ENSPCOG00000016021) #31	GNMT (ENSPCOG00000020942) #32	PEX6 (ENSPCOG00000017469) #33	PPP2R5D (ENSPCOG00000021120) #35	MEA1 (ENSPCOG00000008221) #36	KLHDC3 (ENSPCOG00000024925) #37	RRP36 (ENSPCOG00000018401)
Bushbaby	MODERN SPECIES	146	FOXP4 (ENSOGAG00000010113) #9	MDFI (ENSOGAG00000010114) #10	TFEB (ENSOGAG00000010116) #11	PGC (ENSOGAG00000015217) #12	FRS3 (ENSOGAG00000013038) #13	PRICKLE4 (ENSOGAG00000015219) #14	TOMM6 (ENSOGAG00000027968)	USP49 (ENSOGAG00000015223) #15	MED20 (ENSOGAG00000015228) #16	BYSL (ENSOGAG00000015234) #17	CCND3 (ENSOGAG00000028111) #18	ENSOGAG00000033136	TAF8 (ENSOGAG00000016885) #19	C6orf132 (ENSOGAG00000031300) #20	GUCA1ANB (ENSOGAG00000034714) #21	GUCA1A (ENSOGAG00000016889) #22	GUCA1B (ENSOGAG00000016891) #23	MRPS10 (ENSOGAG00000016892) #24	TRERF1 (ENSOGAG00000025610) #26	UBR2 (ENSOGAG00000012644) #27	PRPH2 (ENSOGAG00000012661) #28	TBCC (ENSOGAG00000028970)	BICRAL (ENSOGAG00000012664) #29	ENSOGAG00000012671	PTCRA (ENSOGAG00000012675) #30	CNPY3 (ENSOGAG00000024957) #31	ENSOGAG00000034570	GNMT (ENSOGAG00000012676) #32	PEX6 (ENSOGAG00000012681) #33	PPP2R5D (ENSOGAG00000012686) #35	MEA1 (ENSOGAG00000012693) #36
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Tree shrew	MODERN SPECIES	9048																GUCA1A (ENSTBEG00000008733) #22
Glires	ANCESTRAL SPECIES	5	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Rodentia	ANCESTRAL SPECIES	6	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000033752	FOXP4 (ENSHGLG00000017157) #9	ENSHGLG00000050681 #10	TFEB (ENSHGLG00000017021) #11	PGC (ENSHGLG00000016998) #12	FRS3 (ENSHGLG00000016987) #13	PRICKLE4 (ENSHGLG00000017140) #14	ENSHGLG00000017125	USP49 (ENSHGLG00000018143) #15	MED20 (ENSHGLG00000045990) #16	ENSHGLG00000034899	BYSL (ENSHGLG00000043783) #17	CCND3 (ENSHGLG00000017469) #18	TAF8 (ENSHGLG00000043938) #19	ENSHGLG00000030674 #20	GUCA1A (ENSHGLG00000017348) #22	GUCA1B (ENSHGLG00000017339) #23	MRPS10 (ENSHGLG00000047994) #24	TRERF1 (ENSHGLG00000017444) #26	UBR2 (ENSHGLG00000018106) #27	PRPH2 (ENSHGLG00000017528) #28	TBCC (ENSHGLG00000033967)	BICRAL (ENSHGLG00000013597) #29	RPL7L1 (ENSHGLG00000037288)	ENSHGLG00000017519 #30	CNPY3 (ENSHGLG00000017512) #31	GNMT (ENSHGLG00000043776) #32	PEX6 (ENSHGLG00000017370) #33	ENSHGLG00000017355 #35	MEA1 (ENSHGLG00000042039) #36	KLHDC3 (ENSHGLG00000017505) #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37	ENSGT00530000064271
Guinea pig	MODERN SPECIES	15	ENSCPOG00000032015 #7	FOXP4 (ENSCPOG00000022669) #9	MDFI (ENSCPOG00000011270) #10	TFEB (ENSCPOG00000008027) #11	Pgc (ENSCPOG00000007183) #12	FRS3 (ENSCPOG00000009128) #13	PRICKLE4 (ENSCPOG00000025180) #14	TOMM6 (ENSCPOG00000026731)	USP49 (ENSCPOG00000014200) #15	MED20 (ENSCPOG00000004401) #16	BYSL (ENSCPOG00000004403) #17	CCND3 (ENSCPOG00000025856) #18	TAF8 (ENSCPOG00000037188) #19	ENSCPOG00000008967	GUCA1ANB (ENSCPOG00000025639) #21	GUCA1A (ENSCPOG00000015715) #22	GUCA1B (ENSCPOG00000009971) #23	MRPS10 (ENSCPOG00000038656) #24	TRERF1 (ENSCPOG00000015717) #26	UBR2 (ENSCPOG00000008040) #27	PRPH2 (ENSCPOG00000008060) #28	BICRAL (ENSCPOG00000005531) #29	RPL7L1 (ENSCPOG00000021189)	ENSCPOG00000011961 #30	CNPY3 (ENSCPOG00000024487) #31	GNMT (ENSCPOG00000033341) #32	PEX6 (ENSCPOG00000008867) #33	PPP2R5D (ENSCPOG00000010949) #35	MEA1 (ENSCPOG00000022111) #36	KLHDC3 (ENSCPOG00000020000) #37	RRP36 (ENSCPOG00000025932)
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000153835.a.b.d ##8	ENSGT00470000042299 #7	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37	ENSGT00530000064271
Long-tailed chinchilla	MODERN SPECIES	144	ENSCLAG00000011026 ##8	ENSCLAG00000013447 #7	FOXP4 (ENSCLAG00000010648) #9	MDFI (ENSCLAG00000009085) #10	TFEB (ENSCLAG00000010323) #11	PGC (ENSCLAG00000014545) #12	FRS3 (ENSCLAG00000009733) #13	PRICKLE4 (ENSCLAG00000010134) #14	TOMM6 (ENSCLAG00000011907)	USP49 (ENSCLAG00000008348) #15	MED20 (ENSCLAG00000014087) #16	BYSL (ENSCLAG00000014143) #17	CCND3 (ENSCLAG00000012340) #18	TAF8 (ENSCLAG00000010662) #19	C6orf132 (ENSCLAG00000012199) #20	GUCA1A (ENSCLAG00000014635) #22	GUCA1B (ENSCLAG00000012411) #23	MRPS10 (ENSCLAG00000009710) #24	TRERF1 (ENSCLAG00000011059) #26	UBR2 (ENSCLAG00000010481) #27	PRPH2 (ENSCLAG00000013249) #28	BICRAL (ENSCLAG00000016200) #29	RPL7L1 (ENSCLAG00000016319)	ENSCLAG00000014195 #30	CNPY3 (ENSCLAG00000017352) #31	GNMT (ENSCLAG00000013521) #32	PEX6 (ENSCLAG00000015038) #33	PPP2R5D (ENSCLAG00000013869) #35	MEA1 (ENSCLAG00000012643) #36	KLHDC3 (ENSCLAG00000012968) #37	RRP36 (ENSCLAG00000013166)
Degu	MODERN SPECIES	46	UNC5CL (ENSODEG00000016082)	APOBEC2 (ENSODEG00000016183)	OARD1 (ENSODEG00000016459)	NFYA (ENSODEG00000016486)	FOXP4 (ENSODEG00000016118) #9	MDFI (ENSODEG00000016228) #10	TFEB (ENSODEG00000016378) #11	PGC (ENSODEG00000016519) #12	FRS3 (ENSODEG00000016315) #13	ENSODEG00000016072	USP49 (ENSODEG00000016122) #15	ENSODEG00000016278 #16	BYSL (ENSODEG00000016059) #17	CCND3 (ENSODEG00000016198) #18	TAF8 (ENSODEG00000016379) #19	GUCA1A (ENSODEG00000017524) #22	GUCA1B (ENSODEG00000016620) #23	ENSODEG00000016597 #24	TRERF1 (ENSODEG00000016793) #26	ENSODEG00000016578	UBR2 (ENSODEG00000016107) #27	PRPH2 (ENSODEG00000015752) #28	BICRAL (ENSODEG00000016015) #29	ENSODEG00000016008	ENSODEG00000015766 #30	CNPY3 (ENSODEG00000016375) #31	ENSODEG00000020410 #32	PEX6 (ENSODEG00000016259) #33	ENSODEG00000016079 #35	ENSODEG00000016048 #36	KLHDC3 (ENSODEG00000015625) #37
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Marmotini	ANCESTRAL SPECIES	18	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626.g.a.a #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00940000159691 #11	ENSGT00940000160626.g.a.a #12	ENSGT00940000160626.g.a.b #12	ENSGT00940000160626.h.a #12	ENSGT00940000160626.h.b #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00940000167232	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Arctic ground squirrel	MODERN SPECIES	25	ENSUPAG00010017263 #12	ENSUPAG00010017268 #12	ENSUPAG00010017270 #12	ENSUPAG00010017278 #12	FRS3 (ENSUPAG00010017434) #13	PRICKLE4 (ENSUPAG00010017449) #14	TOMM6 (ENSUPAG00010017460)	USP49 (ENSUPAG00010017466) #15	ENSUPAG00010017473	MED20 (ENSUPAG00010017477) #16	BYSL (ENSUPAG00010017483) #17	ENSUPAG00010017494 #18	TAF8 (ENSUPAG00010017545) #19	C6orf132 (ENSUPAG00010017552) #20	GUCA1ANB (ENSUPAG00010017561) #21	GUCA1A (ENSUPAG00010017567) #22	GUCA1B (ENSUPAG00010017574) #23	MRPS10 (ENSUPAG00010017579) #24	TRERF1 (ENSUPAG00010017612) #26	UBR2 (ENSUPAG00010017681) #27	PRPH2 (ENSUPAG00010017789) #28	TBCC (ENSUPAG00010017795)	BICRAL (ENSUPAG00010017797) #29	ENSUPAG00010017818	ENSUPAG00010017828	ENSUPAG00010017837 #30	CNPY3 (ENSUPAG00010017840) #31	GNMT (ENSUPAG00010017846) #32	PEX6 (ENSUPAG00010017851) #33	PPP2R5D (ENSUPAG00010017909) #35	MEA1 (ENSUPAG00010017984) #36
Squirrel	MODERN SPECIES	76	ENSSTOG00000027884 #12	ENSSTOG00000028126	ENSSTOG00000022561 #12	ENSSTOG00000032241 #12	ENSSTOG00000006547 #12	FRS3 (ENSSTOG00000006583) #13	PRICKLE4 (ENSSTOG00000006618) #14	TOMM6 (ENSSTOG00000027205)	USP49 (ENSSTOG00000025366) #15	MED20 (ENSSTOG00000015649) #16	BYSL (ENSSTOG00000021848) #17	CCND3 (ENSSTOG00000021553) #18	TAF8 (ENSSTOG00000015660) #19	ENSSTOG00000020834	ENSSTOG00000028530 #21	GUCA1A (ENSSTOG00000023474) #22	GUCA1B (ENSSTOG00000029266) #23	MRPS10 (ENSSTOG00000027016) #24	TRERF1 (ENSSTOG00000022996) #26	UBR2 (ENSSTOG00000025376) #27	PRPH2 (ENSSTOG00000034259) #28	TBCC (ENSSTOG00000009828)	BICRAL (ENSSTOG00000009833) #29	ENSSTOG00000033032	RPL7L1 (ENSSTOG00000030480)	ENSSTOG00000031403 #30	CNPY3 (ENSSTOG00000027284) #31	GNMT (ENSSTOG00000009464) #32	PEX6 (ENSSTOG00000009471) #33	PPP2R5D (ENSSTOG00000020905) #35	MEA1 (ENSSTOG00000021224) #36
Alpin marmot	MODERN SPECIES	20	TFEB (ENSMMMG00000024479) #11	ENSMMMG00000024480 #12	ENSMMMG00000024481 #12	ENSMMMG00000024482 #12	ENSMMMG00000024483	ENSMMMG00000024484 #12	FRS3 (ENSMMMG00000024485) #13	TOMM6 (ENSMMMG00000024487)	USP49 (ENSMMMG00000024489) #15	MED20 (ENSMMMG00000024491) #16	BYSL (ENSMMMG00000024493) #17	CCND3 (ENSMMMG00000024495) #18	TAF8 (ENSMMMG00000024498) #19	C6orf132 (ENSMMMG00000024504) #20	GUCA1ANB (ENSMMMG00000024506) #21	GUCA1A (ENSMMMG00000024507) #22	GUCA1B (ENSMMMG00000024508) #23	MRPS10 (ENSMMMG00000024510) #24	TRERF1 (ENSMMMG00000024512) #26	UBR2 (ENSMMMG00000024514) #27	ENSMMMG00000024515	PRPH2 (ENSMMMG00000024516) #28	TBCC (ENSMMMG00000024517)	BICRAL (ENSMMMG00000024518) #29	ENSMMMG00000024521	ENSMMMG00000024524 #30	CNPY3 (ENSMMMG00000024525) #31	GNMT (ENSMMMG00000024526) #32	PEX6 (ENSMMMG00000024527) #33	PPP2R5D (ENSMMMG00000024528) #35	MEA1 (ENSMMMG00000024529) #36
Eurasian red squirrel	MODERN SPECIES	16	MDFI (ENSSVLG00005011488) #10	TFEB (ENSSVLG00005011275) #11	ENSSVLG00005010996 #12	ENSSVLG00005010518 #12	ENSSVLG00005010387 #12	ENSSVLG00005010119 #12	FRS3 (ENSSVLG00005010054) #13	ENSSVLG00005009846	USP49 (ENSSVLG00005009753) #15	MED20 (ENSSVLG00005009716) #16	BYSL (ENSSVLG00005009680) #17	CCND3 (ENSSVLG00005009557) #18	ENSSVLG00005009511	TAF8 (ENSSVLG00005009379) #19	ENSSVLG00005009295 #21	GUCA1A (ENSSVLG00005009248) #22	GUCA1B (ENSSVLG00005009219) #23	MRPS10 (ENSSVLG00005009185) #24	TRERF1 (ENSSVLG00005008763) #26	ENSSVLG00005008700	ENSSVLG00005008679	UBR2 (ENSSVLG00005008573) #27	PRPH2 (ENSSVLG00005008515) #28	TBCC (ENSSVLG00005008498)	BICRAL (ENSSVLG00005008432) #29	ENSSVLG00005008408	CNPY3 (ENSSVLG00005008168) #31	GNMT (ENSSVLG00005008120) #32	PEX6 (ENSSVLG00005008076) #33	PPP2R5D (ENSSVLG00005007937) #35	MEA1 (ENSSVLG00005007819) #36
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Muroidea	ANCESTRAL SPECIES	42	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241.i #17	ENSGT00940000160743 #18	ENSGT00390000017567.g #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241.i #17	ENSGT00940000160743 #18	ENSGT00390000017567.g #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Golden Hamster	MODERN SPECIES	649	1700122O11Rik (ENSMAUG00000015368)	Foxp4 (ENSMAUG00000012077) #9	ENSMAUG00000010957	Mdfi (ENSMAUG00000013318) #10	Tfeb (ENSMAUG00000012025) #11	Pgc (ENSMAUG00000009628) #12	Frs3 (ENSMAUG00000014355) #13	Prickle4 (ENSMAUG00000013903) #14	Usp49 (ENSMAUG00000012217) #15	Med20 (ENSMAUG00000011361) #16	Bysl (ENSMAUG00000010845) #17	Ccnd3 (ENSMAUG00000010374) #18	Taf8 (ENSMAUG00000000242) #19	AI661453 (ENSMAUG00000019106) #20	ENSMAUG00000014964 #21	Guca1a (ENSMAUG00000014252) #22	Guca1b (ENSMAUG00000012246) #23	Mrps10 (ENSMAUG00000018141) #24	Trerf1 (ENSMAUG00000016098) #26	Ubr2 (ENSMAUG00000009976) #27	Tbcc (ENSMAUG00000001324)	ENSMAUG00000014668	Bicral (ENSMAUG00000014344) #29	Rpl7l1 (ENSMAUG00000010525)	2310039H08Rik (ENSMAUG00000010383)	Ptcra (ENSMAUG00000017220) #30	Cnpy3 (ENSMAUG00000017045) #31	Gnmt (ENSMAUG00000016515) #32	Pex6 (ENSMAUG00000015976) #33	Ppp2r5d (ENSMAUG00000010413) #35	Mea1 (ENSMAUG00000009586) #36
Chinese hamster chok1gshd	MODERN SPECIES	184	Pi16 (ENSCGRG00001007606)	BC004004 (ENSCGRG00001023827)	Ppil1 (ENSCGRG00001023664)	Cpne5 (ENSCGRG00001022541)	Rab44 (ENSCGRG00001019434)	Cdkn1a (ENSCGRG00001016153)	ENSCGRG00001014666	Stk38 (ENSCGRG00001013681)	Kctd20 (ENSCGRG00001012722)	ENSCGRG00001010109 #17	ENSCGRG00001006626 #17	Ccnd3 (ENSCGRG00001003998) #18	Taf8 (ENSCGRG00001002329) #19	ENSCGRG00001000427	1700001C19Rik (ENSCGRG00001013888) #21	Guca1a (ENSCGRG00001013312) #22	Guca1b (ENSCGRG00001012958) #23	Mrps10 (ENSCGRG00001007617) #24	Trerf1 (ENSCGRG00001001250) #26	Ubr2 (ENSCGRG00001005446) #27	Prph2 (ENSCGRG00001017570) #28	Tbcc (ENSCGRG00001012387)	Bicral (ENSCGRG00001000750) #29	Rpl7l1 (ENSCGRG00001023262)	2310039H08Rik (ENSCGRG00001002644)	Ptcra (ENSCGRG00001020848) #30	Cnpy3 (ENSCGRG00001024003) #31	Gnmt (ENSCGRG00001020404) #32	Pex6 (ENSCGRG00001014931) #33	ENSCGRG00001011102 #35	ENSCGRG00001021184 #36
Cricetidae_B	ANCESTRAL SPECIES	32	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241.i #17	ENSGT00940000160743 #18	ENSGT00390000017567.h #19	ENSGT00390000017567.g #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Northern American deer mouse	MODERN SPECIES	13	Foxp4 (ENSPEMG00000022403) #9	Mdfi (ENSPEMG00000023317) #10	Tfeb (ENSPEMG00000023738) #11	Pgc (ENSPEMG00000024008) #12	Frs3 (ENSPEMG00000016427) #13	Prickle4 (ENSPEMG00000010462) #14	Tomm6 (ENSPEMG00000026396)	Usp49 (ENSPEMG00000003741) #15	ENSPEMG00000029127	Med20 (ENSPEMG00000006688) #16	Bysl (ENSPEMG00000022283) #17	ENSPEMG00000026066 #18	ENSPEMG00000023347 #19	AI661453 (ENSPEMG00000008630) #20	ENSPEMG00000023958 #21	Guca1a (ENSPEMG00000002406) #22	Guca1b (ENSPEMG00000020343) #23	Mrps10 (ENSPEMG00000021650) #24	Trerf1 (ENSPEMG00000015708) #26	Ubr2 (ENSPEMG00000009594) #27	Prph2 (ENSPEMG00000025130) #28	Tbcc (ENSPEMG00000000808)	Bicral (ENSPEMG00000014823) #29	Rpl7l1 (ENSPEMG00000000965)	ENSPEMG00000031400	ENSPEMG00000025306	Ptcra (ENSPEMG00000009914) #30	Cnpy3 (ENSPEMG00000013516) #31	Gnmt (ENSPEMG00000011330) #32	Pex6 (ENSPEMG00000001714) #33	Ppp2r5d (ENSPEMG00000010102) #35
Prairie vole	MODERN SPECIES	352	Foxp4 (ENSMOCG00000021065) #9	Mdfi (ENSMOCG00000018141) #10	Tfeb (ENSMOCG00000001065) #11	Pgc (ENSMOCG00000010583) #12	Frs3 (ENSMOCG00000007370) #13	Prickle4 (ENSMOCG00000003655) #14	Tomm6 (ENSMOCG00000008944)	Usp49 (ENSMOCG00000007999) #15	Med20 (ENSMOCG00000013536) #16	Bysl (ENSMOCG00000002210) #17	Ccnd3 (ENSMOCG00000013065) #18	ENSMOCG00000021707	Taf8 (ENSMOCG00000022773) #19	AI661453 (ENSMOCG00000017972) #20	ENSMOCG00000015861 #21	Guca1a (ENSMOCG00000012937) #22	Guca1b (ENSMOCG00000015159) #23	Mrps10 (ENSMOCG00000012423) #24	Trerf1 (ENSMOCG00000006782) #26	Ubr2 (ENSMOCG00000011858) #27	Prph2 (ENSMOCG00000013387) #28	Tbcc (ENSMOCG00000004719)	Bicral (ENSMOCG00000011653) #29	Rpl7l1 (ENSMOCG00000020093)	Ptcra (ENSMOCG00000013331) #30	Cnpy3 (ENSMOCG00000022685) #31	ENSMOCG00000004686 #32	Pex6 (ENSMOCG00000001645) #33	Ppp2r5d (ENSMOCG00000019501) #35	ENSMOCG00000010358 #36	Klhdc3 (ENSMOCG00000002035) #37
Murinae	ANCESTRAL SPECIES	9	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Mus	ANCESTRAL SPECIES	16	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Mus_A	ANCESTRAL SPECIES	10	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626.e #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743.m #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Mus_B	ANCESTRAL SPECIES	9	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626.e #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743.m #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Mus_C	ANCESTRAL SPECIES	9	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626.e #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.r	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743.m #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00900000143235	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.p	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
spretus	MODERN SPECIES	8	Mdfi (MGP_SPRETEiJ_G0022625) #10	Tfeb (MGP_SPRETEiJ_G0022624) #11	Pgc (MGP_SPRETEiJ_G0022623) #12	Frs3 (MGP_SPRETEiJ_G0022622) #13	MGP_SPRETEiJ_G0022621 #14	MGP_SPRETEiJ_G0022620 #14	Tomm6 (MGP_SPRETEiJ_G0022619)	Usp49 (MGP_SPRETEiJ_G0022618) #15	MGP_SPRETEiJ_G0022617 #16	Med20 (MGP_SPRETEiJ_G0022616) #16	Bysl (MGP_SPRETEiJ_G0022615) #17	Ccnd3 (MGP_SPRETEiJ_G0022614) #18	Taf8 (MGP_SPRETEiJ_G0022613) #19	MGP_SPRETEiJ_G0022612	1700001C19Rik (MGP_SPRETEiJ_G0022611) #21	Guca1a (MGP_SPRETEiJ_G0022610) #22	Guca1b (MGP_SPRETEiJ_G0022609) #23	Mrps10 (MGP_SPRETEiJ_G0022608) #24	MGP_SPRETEiJ_G0022607	Ubr2 (MGP_SPRETEiJ_G0022606) #27	Prph2 (MGP_SPRETEiJ_G0022605) #28	Tbcc (MGP_SPRETEiJ_G0022604)	MGP_SPRETEiJ_G0022603	Bicral (MGP_SPRETEiJ_G0022602) #29	Rpl7l1 (MGP_SPRETEiJ_G0022601)	2310039H08Rik (MGP_SPRETEiJ_G0022600)	Ptcra (MGP_SPRETEiJ_G0022599) #30	Cnpy3 (MGP_SPRETEiJ_G0022598) #31	Gnmt (MGP_SPRETEiJ_G0022597) #32	Pex6 (MGP_SPRETEiJ_G0022596) #33	Ppp2r5d (MGP_SPRETEiJ_G0022595) #35
Mouse	MODERN SPECIES	8	1700122O11Rik (ENSMUSG00000094928)	Foxp4 (ENSMUSG00000023991) #9	Mdfi (ENSMUSG00000032717) #10	Tfeb (ENSMUSG00000023990) #11	Pgc (ENSMUSG00000023987) #12	Frs3 (ENSMUSG00000023266) #13	Prickle4 (ENSMUSG00000096549) #14	Tomm6 (ENSMUSG00000033475)	Usp49 (ENSMUSG00000090115) #15	Med20 (ENSMUSG00000092558) #16	Bysl (ENSMUSG00000023988) #17	Ccnd3 (ENSMUSG00000034165) #18	Taf8 (ENSMUSG00000023980) #19	AI661453 (ENSMUSG00000034382) #20	1700001C19Rik (ENSMUSG00000047150) #21	Guca1a (ENSMUSG00000023982) #22	Guca1b (ENSMUSG00000023979) #23	Mrps10 (ENSMUSG00000034729) #24	Trerf1 (ENSMUSG00000064043) #26	Ubr2 (ENSMUSG00000023977) #27	Prph2 (ENSMUSG00000023978) #28	Tbcc (ENSMUSG00000036430)	Bicral (ENSMUSG00000036568) #29	Rpl7l1 (ENSMUSG00000063888)	2310039H08Rik (ENSMUSG00000062619)	Ptcra (ENSMUSG00000036858) #30	Cnpy3 (ENSMUSG00000023973) #31	Gnmt (ENSMUSG00000002769) #32	Pex6 (ENSMUSG00000002763) #33	Ppp2r5d (ENSMUSG00000059409) #35	Mea1 (ENSMUSG00000002768) #36
Ryukyu mouse	MODERN SPECIES	8	Mdfi (MGP_CAROLIEiJ_G0021713) #10	Tfeb (MGP_CAROLIEiJ_G0021712) #11	Pgc (MGP_CAROLIEiJ_G0021711) #12	Frs3 (MGP_CAROLIEiJ_G0021710) #13	MGP_CAROLIEiJ_G0021709 #14	MGP_CAROLIEiJ_G0021708 #14	Tomm6 (MGP_CAROLIEiJ_G0021707)	Usp49 (MGP_CAROLIEiJ_G0021706) #15	MGP_CAROLIEiJ_G0021705 #16	Med20 (MGP_CAROLIEiJ_G0021704) #16	Bysl (MGP_CAROLIEiJ_G0021703) #17	Ccnd3 (MGP_CAROLIEiJ_G0021702) #18	Taf8 (MGP_CAROLIEiJ_G0021701) #19	AI661453 (MGP_CAROLIEiJ_G0021700) #20	1700001C19Rik (MGP_CAROLIEiJ_G0021699) #21	Guca1a (MGP_CAROLIEiJ_G0021698) #22	MGP_CAROLIEiJ_G0021697 #23	Mrps10 (MGP_CAROLIEiJ_G0021696) #24	MGP_CAROLIEiJ_G0021695	Ubr2 (MGP_CAROLIEiJ_G0021694) #27	Prph2 (MGP_CAROLIEiJ_G0021693) #28	Tbcc (MGP_CAROLIEiJ_G0021692)	MGP_CAROLIEiJ_G0021691	Bicral (MGP_CAROLIEiJ_G0021690) #29	Rpl7l1 (MGP_CAROLIEiJ_G0021689)	2310039H08Rik (MGP_CAROLIEiJ_G0021688)	Ptcra (MGP_CAROLIEiJ_G0021687) #30	Cnpy3 (MGP_CAROLIEiJ_G0021686) #31	Gnmt (MGP_CAROLIEiJ_G0021685) #32	Pex6 (MGP_CAROLIEiJ_G0021684) #33	Ppp2r5d (MGP_CAROLIEiJ_G0021683) #35
Shrew mouse	MODERN SPECIES	9	Mdfi (MGP_PahariEiJ_G0020703) #10	Tfeb (MGP_PahariEiJ_G0020702) #11	Pgc (MGP_PahariEiJ_G0020701) #12	Frs3 (MGP_PahariEiJ_G0020700) #13	MGP_PahariEiJ_G0020699 #14	MGP_PahariEiJ_G0020698 #14	Tomm6 (MGP_PahariEiJ_G0020697)	Usp49 (MGP_PahariEiJ_G0020696) #15	MGP_PahariEiJ_G0020695 #16	Med20 (MGP_PahariEiJ_G0020694) #16	Bysl (MGP_PahariEiJ_G0020693) #17	Ccnd3 (MGP_PahariEiJ_G0020692) #18	Taf8 (MGP_PahariEiJ_G0020691) #19	AI661453 (MGP_PahariEiJ_G0020690) #20	MGP_PahariEiJ_G0020689 #21	Guca1a (MGP_PahariEiJ_G0020688) #22	MGP_PahariEiJ_G0020687 #23	Mrps10 (MGP_PahariEiJ_G0020686) #24	MGP_PahariEiJ_G0020685	Ubr2 (MGP_PahariEiJ_G0020684) #27	Prph2 (MGP_PahariEiJ_G0020683) #28	Tbcc (MGP_PahariEiJ_G0020682)	MGP_PahariEiJ_G0020681 #29	Rpl7l1 (MGP_PahariEiJ_G0020680)	2310039H08Rik (MGP_PahariEiJ_G0020679)	Ptcra (MGP_PahariEiJ_G0020678) #30	Cnpy3 (MGP_PahariEiJ_G0020677) #31	Gnmt (MGP_PahariEiJ_G0020676) #32	Pex6 (MGP_PahariEiJ_G0020675) #33	Ppp2r5d (MGP_PahariEiJ_G0020674) #35	Mea1 (MGP_PahariEiJ_G0020673) #36
Rat	MODERN SPECIES	19	LOC680955 (ENSRNOG00000040095)	LOC100911489 (ENSRNOG00000067280)	Foxp4 (ENSRNOG00000022804) #9	Mdfi (ENSRNOG00000014987) #10	Tfeb (ENSRNOG00000014666) #11	Pgc (ENSRNOG00000014492) #12	Frs3 (ENSRNOG00000014328) #13	Prickle4 (ENSRNOG00000014180) #14	Usp49 (ENSRNOG00000013866) #15	Med20 (ENSRNOG00000013852) #16	Bysl (ENSRNOG00000049121) #17	Ccnd3 (ENSRNOG00000050258) #18	Taf8 (ENSRNOG00000015249) #19	C9h6orf132 (ENSRNOG00000015297) #20	LOC100912849 (ENSRNOG00000015386) #21	Guca1a (ENSRNOG00000015402) #22	Guca1b (ENSRNOG00000015623) #23	Mrps10 (ENSRNOG00000022609) #24	Trerf1 (ENSRNOG00000022598) #26	Ubr2 (ENSRNOG00000015813) #27	Prph2 (ENSRNOG00000068377) #28	Tbcc (ENSRNOG00000048291)	Bicral (ENSRNOG00000016229) #29	Rpl7l1 (ENSRNOG00000016269)	LOC681367 (ENSRNOG00000046871)	Ptcra (ENSRNOG00000042581) #30	Cnpy3 (ENSRNOG00000016315) #31	Gnmt (ENSRNOG00000016349) #32	Pex6 (ENSRNOG00000016655) #33	Ppp2r5d (ENSRNOG00000016849) #35	Mea1 (ENSRNOG00000017144) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	504	ENSNGAG00000012918	Foxp4 (ENSNGAG00000019301) #9	Mdfi (ENSNGAG00000019621) #10	Tfeb (ENSNGAG00000000739) #11	Pgc (ENSNGAG00000009141) #12	Frs3 (ENSNGAG00000017744) #13	Prickle4 (ENSNGAG00000006023) #14	Tomm6 (ENSNGAG00000016016)	Usp49 (ENSNGAG00000017308) #15	Med20 (ENSNGAG00000001431) #16	Bysl (ENSNGAG00000005496) #17	Ccnd3 (ENSNGAG00000007233) #18	Taf8 (ENSNGAG00000001080) #19	ENSNGAG00000015126	ENSNGAG00000019278 #21	Guca1a (ENSNGAG00000005372) #22	ENSNGAG00000005992 #23	Trerf1 (ENSNGAG00000008949) #26
Lesser Egyptian jerboa	MODERN SPECIES	41	Trem1 (ENSJJAG00000002311) #7	Foxp4 (ENSJJAG00000012682) #9	Mdfi (ENSJJAG00000011462) #10	Tfeb (ENSJJAG00000006884) #11	Pgc (ENSJJAG00000020186) #12	Frs3 (ENSJJAG00000016510) #13	ENSJJAG00000009681 #14	Tomm6 (ENSJJAG00000014090)	Usp49 (ENSJJAG00000010810) #15	Med20 (ENSJJAG00000023488) #16	ENSJJAG00000023129 #17	Ccnd3 (ENSJJAG00000020109) #18	Taf8 (ENSJJAG00000014681) #19	ENSJJAG00000014868	ENSJJAG00000012922 #21	Guca1a (ENSJJAG00000021759) #22	Guca1b (ENSJJAG00000013876) #23	Mrps10 (ENSJJAG00000009159) #24	Trerf1 (ENSJJAG00000017829) #26	Ubr2 (ENSJJAG00000014743) #27	Prph2 (ENSJJAG00000014637) #28	Tbcc (ENSJJAG00000009303)	Bicral (ENSJJAG00000023549) #29	Rpl7l1 (ENSJJAG00000023723)	Ptcra (ENSJJAG00000003881) #30	Cnpy3 (ENSJJAG00000006773) #31	ENSJJAG00000001038 #32	Pex6 (ENSJJAG00000005949) #33	Ppp2r5d (ENSJJAG00000011011) #35	Mea1 (ENSJJAG00000022932) #36	Klhdc3 (ENSJJAG00000022494) #37
Kangaroo rat	MODERN SPECIES	363	Trem2 (ENSDORG00000002311)	ENSDORG00000012047 ##8	Foxp4 (ENSDORG00000015708) #9	Mdfi (ENSDORG00000015709) #10	ENSDORG00000024734 #11	Pgc (ENSDORG00000007516) #12	Prickle4 (ENSDORG00000001459) #14	ENSDORG00000001463	ENSDORG00000025661 #15	Med20 (ENSDORG00000010967) #16	Bysl (ENSDORG00000010968) #17	Ccnd3 (ENSDORG00000025933) #18	Taf8 (ENSDORG00000012970) #19	ENSDORG00000011144	ENSDORG00000005727 #21	Guca1a (ENSDORG00000023559) #22	Guca1b (ENSDORG00000002076) #23	Mrps10 (ENSDORG00000002081) #24	Trerf1 (ENSDORG00000004758) #26	Ubr2 (ENSDORG00000011936) #27	Prph2 (ENSDORG00000011952) #28	Bicral (ENSDORG00000012173) #29	Rpl7l1 (ENSDORG00000012175)	Cnpy3 (ENSDORG00000012177) #31	Gnmt (ENSDORG00000012178) #32	Pex6 (ENSDORG00000012179) #33	Ppp2r5d (ENSDORG00000012182) #35	Mea1 (ENSDORG00000012184) #36	Klhdc3 (ENSDORG00000012185) #37	Rrp36 (ENSDORG00000012186)	Mrpl2 (ENSDORG00000012189)
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00470000042299 #7	ENSGT01030000234811	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060.h #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Pika	MODERN SPECIES	6647													NFE2L2 (ENSOPRG00000013934)	TAF8 (ENSOPRG00000013945) #19	GUCA1ANB (ENSOPRG00000018852) #21	GUCA1A (ENSOPRG00000013964) #22
Rabbit	MODERN SPECIES	3	ENSOCUG00000011397 #7	ENSOCUG00000029152	ENSOCUG00000033208	MDFI (ENSOCUG00000012322) #10	TFEB (ENSOCUG00000027474) #11	FRS3 (ENSOCUG00000000507) #13	PRICKLE4 (ENSOCUG00000000509) #14	TOMM6 (ENSOCUG00000022642)	USP49 (ENSOCUG00000021251) #15	MED20 (ENSOCUG00000017562) #16	ENSOCUG00000017567 #17	CCND3 (ENSOCUG00000017573) #18	TAF8 (ENSOCUG00000009876) #19	C6orf132 (ENSOCUG00000023491) #20	ENSOCUG00000025813 #21	GUCA1A (ENSOCUG00000016325) #22	GUCA1B (ENSOCUG00000024944) #23	ENSOCUG00000038254	MRPS10 (ENSOCUG00000016697) #24	TRERF1 (ENSOCUG00000016703) #26	UBR2 (ENSOCUG00000017960) #27	ENSOCUG00000027455	PRPH2 (ENSOCUG00000017963) #28	ENSOCUG00000022401	ENSOCUG00000017964	BICRAL (ENSOCUG00000013438) #29	ENSOCUG00000003844	CNPY3 (ENSOCUG00000027862) #31	ENSOCUG00000003850 #30	GNMT (ENSOCUG00000003858) #32	PEX6 (ENSOCUG00000003860) #33
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT01100000264839	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a	ENSGT00940000167232	ENSGT00950000182878.b.b.l	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT01100000264839	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00940000167232	ENSGT00950000182878.b.b.k.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT01100000264839	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT01100000264839	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00950000182878.b.b.k.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00530000063615.a	ENSGT00390000006845 #32	ENSGT00550000074953 #33
Microbat	MODERN SPECIES	1581											MED20 (ENSMLUG00000014024) #16	BYSL (ENSMLUG00000014028) #17	CCND3 (ENSMLUG00000014034) #18	TAF8 (ENSMLUG00000004756) #19	C6orf132 (ENSMLUG00000004767) #20	GUCA1A (ENSMLUG00000004770) #22	ENSMLUG00000025451 #23	MRPS10 (ENSMLUG00000016743) #24	TRERF1 (ENSMLUG00000016748) #26
Greater horseshoe bat	MODERN SPECIES	21	ENSRFEG00010001867	FOXP4 (ENSRFEG00010001882) #9	MDFI (ENSRFEG00010001923) #10	TFEB (ENSRFEG00010001952) #11	PGC (ENSRFEG00010002003) #12	FRS3 (ENSRFEG00010002055) #13	PRICKLE4 (ENSRFEG00010002092) #14	TOMM6 (ENSRFEG00010002125)	USP49 (ENSRFEG00010002146) #15	MED20 (ENSRFEG00010002176) #16	BYSL (ENSRFEG00010002195) #17	CCND3 (ENSRFEG00010002230) #18	TAF8 (ENSRFEG00010002286) #19	C6orf132 (ENSRFEG00010002339) #20	GUCA1ANB (ENSRFEG00010002357) #21	GUCA1A (ENSRFEG00010002370) #22	GUCA1B (ENSRFEG00010002396) #23	MRPS10 (ENSRFEG00010002427) #24	TRERF1 (ENSRFEG00010002466) #26	UBR2 (ENSRFEG00010002543) #27	PRPH2 (ENSRFEG00010002622) #28	TBCC (ENSRFEG00010002655)	BICRAL (ENSRFEG00010002673) #29	ENSRFEG00010002700	ENSRFEG00010002719	ENSRFEG00010002736 #30	CNPY3 (ENSRFEG00010002746) #31	ENSRFEG00010002775	GNMT (ENSRFEG00010002785) #32	PEX6 (ENSRFEG00010002811) #33	PPP2R5D (ENSRFEG00010002878) #35
Megabat	MODERN SPECIES	6511	FOXP4 (ENSPVAG00000007573) #9	MDFI (ENSPVAG00000007579) #10	TFEB (ENSPVAG00000007581) #11	PGC (ENSPVAG00000007586) #12	FRS3 (ENSPVAG00000007592) #13	PRICKLE4 (ENSPVAG00000007594) #14	TOMM6 (ENSPVAG00000007598)	USP49 (ENSPVAG00000007599) #15	MED20 (ENSPVAG00000007601) #16	BYSL (ENSPVAG00000007606) #17	CCND3 (ENSPVAG00000007610) #18	TAF8 (ENSPVAG00000007614) #19	ENSPVAG00000007617	ENSPVAG00000007619	GUCA1ANB (ENSPVAG00000007620) #21	GUCA1A (ENSPVAG00000007621) #22	MRPS10 (ENSPVAG00000007624) #24	TRERF1 (ENSPVAG00000007626) #26
Equus	ANCESTRAL SPECIES	10	ENSGT00940000153835.a.b.c.a.b #8	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Horse	MODERN SPECIES	12	NCR2 (ENSECAG00000018907) #8	ENSECAG00000030508	FOXP4 (ENSECAG00000000572) #9	MDFI (ENSECAG00000014590) #10	TFEB (ENSECAG00000019762) #11	ENSECAG00000015065	FRS3 (ENSECAG00000015081) #13	USP49 (ENSECAG00000018640) #15	PRICKLE4 (ENSECAG00000017961) #14	MED20 (ENSECAG00000020149) #16	BYSL (ENSECAG00000021260) #17	CCND3 (ENSECAG00000023862) #18	TAF8 (ENSECAG00000024276) #19	C6orf132 (ENSECAG00000034930) #20	ENSECAG00000002139 #21	GUCA1A (ENSECAG00000009745) #22	GUCA1B (ENSECAG00000038639) #23	MRPS10 (ENSECAG00000015274) #24	TRERF1 (ENSECAG00000016971) #26	UBR2 (ENSECAG00000020598) #27	ENSECAG00000058844	ENSECAG00000056989	ENSECAG00000050598	PRPH2 (ENSECAG00000017128) #28	TBCC (ENSECAG00000053303)	BICRAL (ENSECAG00000020500) #29	RPL7L1 (ENSECAG00000003113)	ENSECAG00000010795 #30	CNPY3 (ENSECAG00000042811) #31	GNMT (ENSECAG00000017768) #32	PEX6 (ENSECAG00000019577) #33
Donkey	MODERN SPECIES	28	ENSEASG00005003011	FOXP4 (ENSEASG00005003018) #9	MDFI (ENSEASG00005003031) #10	TFEB (ENSEASG00005003034) #11	ENSEASG00005003040	FRS3 (ENSEASG00005003044) #13	PRICKLE4 (ENSEASG00005003047) #14	ENSEASG00005038459	USP49 (ENSEASG00005037948) #15	MED20 (ENSEASG00005003058) #16	BYSL (ENSEASG00005003059) #17	CCND3 (ENSEASG00005003061) #18	TAF8 (ENSEASG00005003063) #19	C6orf132 (ENSEASG00005036376) #20	GUCA1ANB (ENSEASG00005032539) #21	GUCA1A (ENSEASG00005024726) #22	GUCA1B (ENSEASG00005003070) #23	MRPS10 (ENSEASG00005003071) #24	TRERF1 (ENSEASG00005003074) #26	UBR2 (ENSEASG00005003079) #27	PRPH2 (ENSEASG00005003091) #28	TBCC (ENSEASG00005029087)	BICRAL (ENSEASG00005003101) #29	RPL7L1 (ENSEASG00005003108)	ENSEASG00005037308 #30	CNPY3 (ENSEASG00005003119) #31	GNMT (ENSEASG00005003124) #32	PEX6 (ENSEASG00005003130) #33	PPP2R5D (ENSEASG00005003140) #35	MEA1 (ENSEASG00005034765) #36	KLHDC3 (ENSEASG00005003160) #37
Carnivora	ANCESTRAL SPECIES	4	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Caniformia	ANCESTRAL SPECIES	3	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Canidae	ANCESTRAL SPECIES	6	ENSGT00470000042299 #7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700.v #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l.a	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00470000042299 #7	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700.v #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045.p #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l.a	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Dingo	MODERN SPECIES	276	TREML2 (ENSCAFG00020008359) ##8	TREM1 (ENSCAFG00020008363) #7	ENSCAFG00020008370 #9	MDFI (ENSCAFG00020008376) #10	TFEB (ENSCAFG00020008386) #11	FRS3 (ENSCAFG00020008399) #13	PRICKLE4 (ENSCAFG00020008411) #14	TOMM6 (ENSCAFG00020008414)	USP49 (ENSCAFG00020008418) #15	MED20 (ENSCAFG00020008424) #16	BYSL (ENSCAFG00020008426) #17	CCND3 (ENSCAFG00020008430) #18	TAF8 (ENSCAFG00020008435) #19	C6orf132 (ENSCAFG00020008459) #20	GUCA1ANB (ENSCAFG00020008462) #21	GUCA1A (ENSCAFG00020008468) #22	GUCA1B (ENSCAFG00020008471) #23	ENSCAFG00020008480 #24	TRERF1 (ENSCAFG00020008499) #26	UBR2 (ENSCAFG00020008679) #27	PRPH2 (ENSCAFG00020010555) #28	TBCC (ENSCAFG00020010562)	BICRAL (ENSCAFG00020010567) #29	RPL7L1 (ENSCAFG00020010586)	PTCRA (ENSCAFG00020010601) #30	CNPY3 (ENSCAFG00020010604) #31	GNMT (ENSCAFG00020010607) #32	PEX6 (ENSCAFG00020010623) #33	PPP2R5D (ENSCAFG00020010678) #35	MEA1 (ENSCAFG00020011037) #36	KLHDC3 (ENSCAFG00020011041) #37
Dog	MODERN SPECIES	3	TREM1 (ENSCAFG00845015313) #7	ENSCAFG00845015357 #8	FOXP4 (ENSCAFG00845015420) #9	MDFI (ENSCAFG00845015516) #10	TFEB (ENSCAFG00845015601) #11	FRS3 (ENSCAFG00845015678) #13	PRICKLE4 (ENSCAFG00845015733) #14	TOMM6 (ENSCAFG00845015815)	USP49 (ENSCAFG00845015856) #15	MED20 (ENSCAFG00845015923) #16	BYSL (ENSCAFG00845015977) #17	CCND3 (ENSCAFG00845016058) #18	TAF8 (ENSCAFG00845016250) #19	C6orf132 (ENSCAFG00845016343) #20	GUCA1ANB (ENSCAFG00845005438) #21	GUCA1A (ENSCAFG00845005448) #22	GUCA1B (ENSCAFG00845005466) #23	TRERF1 (ENSCAFG00845005596) #26	UBR2 (ENSCAFG00845005887) #27	PRPH2 (ENSCAFG00845006562) #28	TBCC (ENSCAFG00845006611)	BICRAL (ENSCAFG00845006656) #29	RPL7L1 (ENSCAFG00845006742)	ENSCAFG00845006833 #30	CNPY3 (ENSCAFG00845006859) #31	GNMT (ENSCAFG00845006923) #32	PEX6 (ENSCAFG00845006987) #33	PPP2R5D (ENSCAFG00845007060) #35	MEA1 (ENSCAFG00845007145) #36	KLHDC3 (ENSCAFG00845007294) #37	CUL7 (ENSCAFG00845007591)
Red fox	MODERN SPECIES	7	TREM1 (ENSVVUG00000026657) #7	ENSVVUG00000026658 #8	FOXP4 (ENSVVUG00000026661) #9	MDFI (ENSVVUG00000026662) #10	TFEB (ENSVVUG00000026665) #11	FRS3 (ENSVVUG00000026666) #13	ENSVVUG00000026668 #14	TOMM6 (ENSVVUG00000026670)	USP49 (ENSVVUG00000026671) #15	MED20 (ENSVVUG00000026676) #16	BYSL (ENSVVUG00000026680) #17	CCND3 (ENSVVUG00000026685) #18	TAF8 (ENSVVUG00000026691) #19	C6orf132 (ENSVVUG00000026693) #20	GUCA1ANB (ENSVVUG00000026696) #21	GUCA1A (ENSVVUG00000026699) #22	GUCA1B (ENSVVUG00000026700) #23	MRPS10 (ENSVVUG00000026701) #24	TRERF1 (ENSVVUG00000026706) #26	ENSVVUG00000026735	UBR2 (ENSVVUG00000026828) #27	PRPH2 (ENSVVUG00000027511) #28	TBCC (ENSVVUG00000027515)	BICRAL (ENSVVUG00000027518) #29	ENSVVUG00000027534	PTCRA (ENSVVUG00000027538) #30	CNPY3 (ENSVVUG00000027539) #31	ENSVVUG00000027541 #32	GNMT (ENSVVUG00000027542) #32	PEX6 (ENSVVUG00000027551) #33	PPP2R5D (ENSVVUG00000027623) #35
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Mustelinae	ANCESTRAL SPECIES	8	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
American mink	MODERN SPECIES	50	ENSNVIG00000013230	FOXP4 (ENSNVIG00000012871) #9	MDFI (ENSNVIG00000012832) #10	TFEB (ENSNVIG00000012765) #11	PGC (ENSNVIG00000012741) #12	FRS3 (ENSNVIG00000012724) #13	PRICKLE4 (ENSNVIG00000012701) #14	TOM6 (ENSNVIG00000012692)	USP49 (ENSNVIG00000012647) #15	MED20 (ENSNVIG00000012638) #16	BYST (ENSNVIG00000012629) #17	CCND3 (ENSNVIG00000012598) #18	TAF8 (ENSNVIG00000012563) #19	C6orf132 (ENSNVIG00000012546) #20	GUCA1ANB (ENSNVIG00000012541) #21	GUCA1A (ENSNVIG00000012518) #22	GUCA1B (ENSNVIG00000012511) #23	MRPS10 (ENSNVIG00000012504) #24	TRERF1 (ENSNVIG00000012462) #26	UBR2 (ENSNVIG00000012316) #27	PRPH2 (ENSNVIG00000012308) #28	TBCC (ENSNVIG00000012305)	K0240 (ENSNVIG00000012249) #29	RPL7L1 (ENSNVIG00000012232)	ENSNVIG00000012223	ENSNVIG00000012211 #30	CNPY3 (ENSNVIG00000012190) #31	ENSNVIG00000012179 #32	PEX6 (ENSNVIG00000012146) #33	PPP2R5D (ENSNVIG00000012005) #35	MEA1 (ENSNVIG00000011943) #36
Ferret	MODERN SPECIES	166	ENSMPUG00000013616 #8	ENSMPUG00000013610	FOXP4 (ENSMPUG00000013602) #9	MDFI (ENSMPUG00000013599) #10	TFEB (ENSMPUG00000013594) #11	PGC (ENSMPUG00000013503) #12	FRS3 (ENSMPUG00000013501) #13	PRICKLE4 (ENSMPUG00000013497) #14	USP49 (ENSMPUG00000013495) #15	MED20 (ENSMPUG00000013492) #16	BYSL (ENSMPUG00000013486) #17	CCND3 (ENSMPUG00000013447) #18	TAF8 (ENSMPUG00000013442) #19	C6orf132 (ENSMPUG00000013438) #20	ENSMPUG00000013436	GUCA1A (ENSMPUG00000013400) #22	GUCA1B (ENSMPUG00000013376) #23	MRPS10 (ENSMPUG00000013370) #24	TRERF1 (ENSMPUG00000013360) #26	UBR2 (ENSMPUG00000013344) #27	PRPH2 (ENSMPUG00000013336) #28	TBCC (ENSMPUG00000018846)	BICRAL (ENSMPUG00000013329) #29	RPL7L1 (ENSMPUG00000013296)	ENSMPUG00000013288 #30	ENSMPUG00000013284	CNPY3 (ENSMPUG00000013244) #31	GNMT (ENSMPUG00000013223) #32	PEX6 (ENSMPUG00000013219) #33	PPP2R5D (ENSMPUG00000013215) #35	MEA1 (ENSMPUG00000013200) #36
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000160607.c #22
Giant Panda	MODERN SPECIES	967																ENSAMEG00000025805 #22
Ursidae	ANCESTRAL SPECIES	35	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607.d #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303.b #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Giant Panda	MODERN SPECIES	252																ENSAMEG00000025630 #22
Ursus	ANCESTRAL SPECIES	28	ENSGT00940000153835.a.b.c.b ##8	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00390000014226 #21	ENSGT00940000160607.d #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a.y #27	ENSGT00940000157303.b #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
American black bear	MODERN SPECIES	989											MED20 (ENSUAMG00000027837) #16	BYSL (ENSUAMG00000027838) #17	CCND3 (ENSUAMG00000027839) #18	TAF8 (ENSUAMG00000027841) #19	GUCA1ANB (ENSUAMG00000027844) #21	GUCA1A (ENSUAMG00000027845) #22	ENSUAMG00000027846 #24
Polar bear	MODERN SPECIES	174	ENSUMAG00000012194 ##8	ENSUMAG00000012179	FOXP4 (ENSUMAG00000012042) #9	MDFI (ENSUMAG00000012028) #10	TFEB (ENSUMAG00000012024) #11	PGC (ENSUMAG00000012014) #12	FRS3 (ENSUMAG00000012003) #13	ENSUMAG00000011999 #14	ENSUMAG00000012000	USP49 (ENSUMAG00000011995) #15	MED20 (ENSUMAG00000011993) #16	BYSL (ENSUMAG00000011988) #17	CCND3 (ENSUMAG00000011981) #18	TAF8 (ENSUMAG00000011975) #19	GUCA1ANB (ENSUMAG00000011972) #21	GUCA1A (ENSUMAG00000011969) #22	GUCA1B (ENSUMAG00000011967) #23	MRPS10 (ENSUMAG00000011959) #24	TRERF1 (ENSUMAG00000011953) #26	UBR2 (ENSUMAG00000009456) #27	PRPH2 (ENSUMAG00000009271) #28	TBCC (ENSUMAG00000009247)	BICRAL (ENSUMAG00000009236) #29	RPL7L1 (ENSUMAG00000009231)	ENSUMAG00000009228 #30	CNPY3 (ENSUMAG00000009221) #31	GNMT (ENSUMAG00000009217) #32	PEX6 (ENSUMAG00000009161) #33	MEA1 (ENSUMAG00000009134) #36	PPP2R5D (ENSUMAG00000008781) #35	KLHDC3 (ENSUMAG00000008733) #37
Felidae	ANCESTRAL SPECIES	5	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.m #36	ENSGT00940000157952 #37
Cat	MODERN SPECIES	236	ENSFCAG00000049466	FOXP4 (ENSFCAG00000011519) #9	MDFI (ENSFCAG00000011520) #10	TFEB (ENSFCAG00000011521) #11	PGC (ENSFCAG00000014737) #12	FRS3 (ENSFCAG00000014739) #13	PRICKLE4 (ENSFCAG00000023605) #14	TOMM6 (ENSFCAG00000038846)	USP49 (ENSFCAG00000022369) #15	MED20 (ENSFCAG00000027790) #16	BYSL (ENSFCAG00000026154) #17	CCND3 (ENSFCAG00000036644) #18	TAF8 (ENSFCAG00000041845) #19	CB2H6orf132 (ENSFCAG00000046589) #20	GUCA1ANB (ENSFCAG00000018880) #21	GUCA1A (ENSFCAG00000013623) #22	GUCA1B (ENSFCAG00000042031) #23	MRPS10 (ENSFCAG00000040557) #24	TRERF1 (ENSFCAG00000011210) #26	UBR2 (ENSFCAG00000004141) #27	PRPH2 (ENSFCAG00000004144) #28	TBCC (ENSFCAG00000004145)	BICRAL (ENSFCAG00000029362) #29	RPL7L1 (ENSFCAG00000009707)	PTCRA (ENSFCAG00000009709) #30	CNPY3 (ENSFCAG00000009710) #31	GNMT (ENSFCAG00000009711) #32	PEX6 (ENSFCAG00000009712) #33	PPP2R5D (ENSFCAG00000009713) #35	ENSFCAG00000031337 #36	KLHDC3 (ENSFCAG00000009715) #37
Panthera	ANCESTRAL SPECIES	7	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l.c	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.m #36	ENSGT00940000157952 #37
Panthera_a	ANCESTRAL SPECIES	4	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.l.c	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.m #36	ENSGT00940000157952 #37
lion	MODERN SPECIES	5	TREML2 (ENSPLOG00000002866) ##8	NCR2 (ENSPLOG00000002946) #8	ENSPLOG00000002983	FOXP4 (ENSPLOG00000003014) #9	MDFI (ENSPLOG00000003039) #10	TFEB (ENSPLOG00000003068) #11	PGC (ENSPLOG00000003105) #12	FRS3 (ENSPLOG00000003130) #13	PRICKLE4 (ENSPLOG00000003149) #14	TOMM6 (ENSPLOG00000003177)	USP49 (ENSPLOG00000003193) #15	MED20 (ENSPLOG00000003211) #16	BYSL (ENSPLOG00000003225) #17	CCND3 (ENSPLOG00000003265) #18	TAF8 (ENSPLOG00000003378) #19	GUCA1A (ENSPLOG00000003434) #22	GUCA1B (ENSPLOG00000003448) #23	MRPS10 (ENSPLOG00000003463) #24	TRERF1 (ENSPLOG00000003531) #26	ENSPLOG00000003622	UBR2 (ENSPLOG00000003712) #27	PRPH2 (ENSPLOG00000003871) #28	TBCC (ENSPLOG00000003881)	BICRAL (ENSPLOG00000003908) #29	ENSPLOG00000003934	ENSPLOG00000003953 #30	CNPY3 (ENSPLOG00000003966) #31	GNMT (ENSPLOG00000003985) #32	PEX6 (ENSPLOG00000004003) #33	PPP2R5D (ENSPLOG00000004040) #35	MEA1 (ENSPLOG00000004083) #36
leopard	MODERN SPECIES	30	FOXP4 (ENSPPRG00000002467) #9	MDFI (ENSPPRG00000022722) #10	TFEB (ENSPPRG00000023683) #11	PGC (ENSPPRG00000015974) #12	FRS3 (ENSPPRG00000013960) #13	TOMM6 (ENSPPRG00000013563)	PRICKLE4 (ENSPPRG00000011657) #14	ENSPPRG00000011172	USP49 (ENSPPRG00000011049) #15	MED20 (ENSPPRG00000010645) #16	BYSL (ENSPPRG00000010500) #17	CCND3 (ENSPPRG00000010131) #18	TAF8 (ENSPPRG00000009335) #19	C6orf132 (ENSPPRG00000008556) #20	GUCA1ANB (ENSPPRG00000007957) #21	GUCA1A (ENSPPRG00000007667) #22	GUCA1B (ENSPPRG00000006615) #23	MRPS10 (ENSPPRG00000006267) #24	TRERF1 (ENSPPRG00000006118) #26	UBR2 (ENSPPRG00000003420) #27	PRPH2 (ENSPPRG00000001023) #28	TBCC (ENSPPRG00000015620)	BICRAL (ENSPPRG00000000850) #29	ENSPPRG00000000595	PTCRA (ENSPPRG00000023115) #30	CNPY3 (ENSPPRG00000023529) #31	GNMT (ENSPPRG00000023762) #32	PEX6 (ENSPPRG00000024681) #33	PPP2R5D (ENSPPRG00000024805) #35	ENSPPRG00000017337 #36	KLHDC3 (ENSPPRG00000016392) #37
Tiger	MODERN SPECIES	220	TREM1 (ENSPTIG00000017514) #7	NCR2 (ENSPTIG00000016573) #8	FOXP4 (ENSPTIG00000009478) #9	MDFI (ENSPTIG00000007258) #10	TFEB (ENSPTIG00000018959) #11	PGC (ENSPTIG00000017140) #12	FRS3 (ENSPTIG00000016828) #13	PRICKLE4 (ENSPTIG00000013733) #14	TOMM6 (ENSPTIG00000013327)	USP49 (ENSPTIG00000011351) #15	MED20 (ENSPTIG00000010826) #16	BYSL (ENSPTIG00000010244) #17	CCND3 (ENSPTIG00000007566) #18	TAF8 (ENSPTIG00000001301) #19	GUCA1ANB (ENSPTIG00000020348) #21	GUCA1A (ENSPTIG00000019090) #22	GUCA1B (ENSPTIG00000018931) #23	MRPS10 (ENSPTIG00000018454) #24	TRERF1 (ENSPTIG00000014632) #26	UBR2 (ENSPTIG00000009663) #27	PRPH2 (ENSPTIG00000008614) #28	TBCC (ENSPTIG00000000245)	BICRAL (ENSPTIG00000007798) #29	RPL7L1 (ENSPTIG00000005509)	PTCRA (ENSPTIG00000021904) #30	CNPY3 (ENSPTIG00000021789) #31	GNMT (ENSPTIG00000021496) #32	PEX6 (ENSPTIG00000020580) #33	PPP2R5D (ENSPTIG00000014329) #35	MEA1 (ENSPTIG00000013379) #36	KLHDC3 (ENSPTIG00000011673) #37
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Suina	ANCESTRAL SPECIES	17	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Chacoan peccary	MODERN SPECIES	782	ENSCWAG00000004526 #7	ENSCWAG00000004410	FOXP4 (ENSCWAG00000004349) #9	MDFI (ENSCWAG00000004292) #10	TFEB (ENSCWAG00000004198) #11	PGC (ENSCWAG00000004136) #12	FRS3 (ENSCWAG00000004101) #13	PRICKLE4 (ENSCWAG00000004062) #14	TOMM6 (ENSCWAG00000004039)	USP49 (ENSCWAG00000003995) #15	MED20 (ENSCWAG00000003967) #16	BYSL (ENSCWAG00000003935) #17	CCND3 (ENSCWAG00000003820) #18	TAF8 (ENSCWAG00000003752) #19	GUCA1ANB (ENSCWAG00000003728) #21	GUCA1A (ENSCWAG00000003703) #22	GUCA1B (ENSCWAG00000003679) #23	MRPS10 (ENSCWAG00000018307) #24
Pig	MODERN SPECIES	15	TREM1 (ENSSSCG00000033251) #7	ENSSSCG00000001618 #8	FOXP4 (ENSSSCG00000001619) #9	MDFI (ENSSSCG00000001620) #10	TFEB (ENSSSCG00000001621) #11	PGC (ENSSSCG00000001625) #12	FRS3 (ENSSSCG00000001624) #13	PRICKLE4 (ENSSSCG00000050940) #14	USP49 (ENSSSCG00000001629) #15	MED20 (ENSSSCG00000038520) #16	BYSL (ENSSSCG00000026752) #17	CCND3 (ENSSSCG00000032284) #18	TAF8 (ENSSSCG00000022224) #19	C6orf132 (ENSSSCG00000036801) #20	GUCA1ANB (ENSSSCG00000059449) #21	GUCA1A (ENSSSCG00000001636) #22	GUCA1B (ENSSSCG00000001637) #23	MRPS10 (ENSSSCG00000001638) #24	TRERF1 (ENSSSCG00000001639) #26	UBR2 (ENSSSCG00000001641) #27	ENSSSCG00000056881	PRPH2 (ENSSSCG00000031628) #28	TBCC (ENSSSCG00000026741)	BICRAL (ENSSSCG00000001646) #29	RPL7L1 (ENSSSCG00000026472)	ENSSSCG00000040577	PTCRA (ENSSSCG00000001650) #30	CNPY3 (ENSSSCG00000001651) #31	GNMT (ENSSSCG00000033214) #32	PEX6 (ENSSSCG00000001653) #33	PPP2R5D (ENSSSCG00000001654) #35
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000153835.a.b.c.a.b #8	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.c.a	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045.m #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a	ENSGT00940000167232	ENSGT00440000034488	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Arabian camel	MODERN SPECIES	12	ENSCDRG00005016689	FOXP4 (ENSCDRG00005016769) #9	MDFI (ENSCDRG00005017632) #10	TFEB (ENSCDRG00005017674) #11	PGC (ENSCDRG00005017765) #12	FRS3 (ENSCDRG00005017816) #13	PRICKLE4 (ENSCDRG00005017867) #14	ENSCDRG00005017925	USP49 (ENSCDRG00005017949) #15	MED20 (ENSCDRG00005018002) #16	ENSCDRG00005006391	BYSL (ENSCDRG00005006430) #17	CCND3 (ENSCDRG00005006484) #18	TAF8 (ENSCDRG00005006712) #19	GUCA1ANB (ENSCDRG00005006898) #21	GUCA1A (ENSCDRG00005006831) #22	GUCA1B (ENSCDRG00005007146) #23	ENSCDRG00005007198 #24	TRERF1 (ENSCDRG00005007238) #26	UBR2 (ENSCDRG00005007347) #27	PRPH2 (ENSCDRG00005007663) #28	TBCC (ENSCDRG00005007707)	BICRAL (ENSCDRG00005007736) #29	RPL7L1 (ENSCDRG00005007818)	ENSCDRG00005007853	CNPY3 (ENSCDRG00005008125) #31	GNMT (ENSCDRG00005008180) #32	PEX6 (ENSCDRG00005008247) #33	PPP2R5D (ENSCDRG00005008393) #35	MEA1 (ENSCDRG00005008686) #36	KLHDC3 (ENSCDRG00005008757) #37
Alpaca	MODERN SPECIES	579																GUCA1A (ENSVPAG00000002465) #22
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Cetacea	ANCESTRAL SPECIES	7	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b.b	ENSGT00940000158912.h.a	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Odontoceti	ANCESTRAL SPECIES	5	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045.k #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b.b	ENSGT00940000158912.h.a	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045.k #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045.l #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b.b	ENSGT00940000167232	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Monodontidae	ANCESTRAL SPECIES	4	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045.k #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b.b	ENSGT00940000167232	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37
Narwhal	MODERN SPECIES	310	ENSMMNG00015012963	FOXP4 (ENSMMNG00015012909) #9	MDFI (ENSMMNG00015012881) #10	TFEB (ENSMMNG00015012845) #11	PGC (ENSMMNG00015012820) #12	FRS3 (ENSMMNG00015012812) #13	PRICKLE4 (ENSMMNG00015012804) #14	TOMM6 (ENSMMNG00015012791)	USP49 (ENSMMNG00015012776) #15	MED20 (ENSMMNG00015012762) #16	BYSL (ENSMMNG00015012752) #17	CCND3 (ENSMMNG00015012721) #18	TAF8 (ENSMMNG00015012689) #19	C6orf132 (ENSMMNG00015012670) #20	GUCA1ANB (ENSMMNG00015012656) #21	GUCA1A (ENSMMNG00015012644) #22	GUCA1B (ENSMMNG00015012632) #23	MRPS10 (ENSMMNG00015012623) #24	TRERF1 (ENSMMNG00015012602) #26	UBR2 (ENSMMNG00015012496) #27	PRPH2 (ENSMMNG00015012414) #28	TBCC (ENSMMNG00015012403)	BICRAL (ENSMMNG00015012360) #29	ENSMMNG00015012328	ENSMMNG00015012315	CNPY3 (ENSMMNG00015012247) #31	GNMT (ENSMMNG00015012227) #32	PEX6 (ENSMMNG00015012200) #33	PPP2R5D (ENSMMNG00015012154) #35	MEA1 (ENSMMNG00015012123) #36	KLHDC3 (ENSMMNG00015012056) #37
Beluga whale	MODERN SPECIES	8	ENSDLEG00000011149	FOXP4 (ENSDLEG00000011171) #9	MDFI (ENSDLEG00000011255) #10	TFEB (ENSDLEG00000011268) #11	PGC (ENSDLEG00000011283) #12	FRS3 (ENSDLEG00000011377) #13	PRICKLE4 (ENSDLEG00000011395) #14	TOMM6 (ENSDLEG00000011453)	USP49 (ENSDLEG00000011464) #15	MED20 (ENSDLEG00000011481) #16	BYSL (ENSDLEG00000011493) #17	CCND3 (ENSDLEG00000011516) #18	TAF8 (ENSDLEG00000011540) #19	C6orf132 (ENSDLEG00000011560) #20	GUCA1ANB (ENSDLEG00000011566) #21	GUCA1A (ENSDLEG00000011574) #22	GUCA1B (ENSDLEG00000011600) #23	MRPS10 (ENSDLEG00000011621) #24	TRERF1 (ENSDLEG00000011641) #26	UBR2 (ENSDLEG00000011696) #27	ENSDLEG00000011821 #28	ENSDLEG00000011831 #28	TBCC (ENSDLEG00000011847)	BICRAL (ENSDLEG00000011860) #29	ENSDLEG00000011884	ENSDLEG00000011898	CNPY3 (ENSDLEG00000011909) #31	GNMT (ENSDLEG00000011920) #32	PEX6 (ENSDLEG00000011928) #33	PPP2R5D (ENSDLEG00000012027) #35	MEA1 (ENSDLEG00000012821) #36
Vaquita	MODERN SPECIES	2	ENSPSNG00000010602	FOXP4 (ENSPSNG00000010759) #9	MDFI (ENSPSNG00000011866) #10	TFEB (ENSPSNG00000011981) #11	PGC (ENSPSNG00000012135) #12	FRS3 (ENSPSNG00000012245) #13	PRICKLE4 (ENSPSNG00000012338) #14	TOMM6 (ENSPSNG00000012457)	USP49 (ENSPSNG00000012507) #15	MED20 (ENSPSNG00000012672) #16	BYSL (ENSPSNG00000012738) #17	CCND3 (ENSPSNG00000012800) #18	TAF8 (ENSPSNG00000013036) #19	C6orf132 (ENSPSNG00000013160) #20	GUCA1ANB (ENSPSNG00000013195) #21	GUCA1A (ENSPSNG00000013237) #22	GUCA1B (ENSPSNG00000013308) #23	ENSPSNG00000013382 #24	TRERF1 (ENSPSNG00000013444) #26	UBR2 (ENSPSNG00000013703) #27	PRPH2 (ENSPSNG00000013919) #28	TBCC (ENSPSNG00000013993)	BICRAL (ENSPSNG00000014055) #29	ENSPSNG00000014219	CNPY3 (ENSPSNG00000014861) #31	GNMT (ENSPSNG00000015036) #32	PEX6 (ENSPSNG00000015144) #33	PPP2R5D (ENSPSNG00000015286) #35	MEA1 (ENSPSNG00000015569) #36	KLHDC3 (ENSPSNG00000015669) #37	RRP36 (ENSPSNG00000015793)
Dolphin	MODERN SPECIES	2478													ENSTTRG00000014044	ENSTTRG00000014051	GUCA1ANB (ENSTTRG00000014054) #21	GUCA1A (ENSTTRG00000014056) #22	GUCA1B (ENSTTRG00000014060) #23	MRPS10 (ENSTTRG00000014063) #24	TRERF1 (ENSTTRG00000014065) #26
Sperm whale	MODERN SPECIES	9	OARD1 (ENSPCTG00005021366)	NFYA (ENSPCTG00005021420)	ENSPCTG00005004346	TREML1 (ENSPCTG00005004442)	TREM2 (ENSPCTG00005004514)	TREML2 (ENSPCTG00005004549) ##8	ENSPCTG00005004578 #7	ENSPCTG00005004605	FOXP4 (ENSPCTG00005004666) #9	MED20 (ENSPCTG00005004839) #16	BYSL (ENSPCTG00005004855) #17	CCND3 (ENSPCTG00005004894) #18	TAF8 (ENSPCTG00005005090) #19	C6orf132 (ENSPCTG00005005133) #20	GUCA1ANB (ENSPCTG00005005159) #21	GUCA1A (ENSPCTG00005005175) #22	GUCA1B (ENSPCTG00005005202) #23	ENSPCTG00005005220 #24	ENSPCTG00005005242 #26	UBR2 (ENSPCTG00005005313) #27	PRPH2 (ENSPCTG00005005569) #28	TBCC (ENSPCTG00005005588)	BICRAL (ENSPCTG00005005622) #29	ENSPCTG00005005648	ENSPCTG00005005675	ENSPCTG00005005732	SRF (ENSPCTG00005005770)	SLC22A7 (ENSPCTG00005005815)	CRIP3 (ENSPCTG00005005915)	ZNF318 (ENSPCTG00005006018)	TJAP1 (ENSPCTG00005006103)
Blue whale	MODERN SPECIES	2	FOXP4 (ENSBMSG00010010356) #9	MDFI (ENSBMSG00010010338) #10	TFEB (ENSBMSG00010010299) #11	PGC (ENSBMSG00010010276) #12	FRS3 (ENSBMSG00010010261) #13	PRICKLE4 (ENSBMSG00010010242) #14	ENSBMSG00010010229	USP49 (ENSBMSG00010010213) #15	ENSBMSG00010010206	ENSBMSG00010010194 #16	BYSL (ENSBMSG00010010176) #17	CCND3 (ENSBMSG00010010130) #18	TAF8 (ENSBMSG00010010093) #19	C6orf132 (ENSBMSG00010010068) #20	GUCA1ANB (ENSBMSG00010010047) #21	GUCA1A (ENSBMSG00010010030) #22	ENSBMSG00010010003 #23	TRERF1 (ENSBMSG00010009880) #26	ENSBMSG00010009836	ENSBMSG00010009818 #27	ENSBMSG00010009795 #27	ENSBMSG00010009780	PRPH2 (ENSBMSG00010009768) #28	TBCC (ENSBMSG00010009756)	BICRAL (ENSBMSG00010009740) #29	ENSBMSG00010009726	ENSBMSG00010009715	ENSBMSG00010009706	PTCRA (ENSBMSG00010009694) #30	CNPY3 (ENSBMSG00010009680) #31	GNMT (ENSBMSG00010009660) #32
Pecora	ANCESTRAL SPECIES	21	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b #36
Percora_a	ANCESTRAL SPECIES	12	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b #36
Bovidae	ANCESTRAL SPECIES	13	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b #36
Bovinae	ANCESTRAL SPECIES	9	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060.r #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b.b #36
Bos	ANCESTRAL SPECIES	17	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d.e	ENSGT00940000157997 #15	ENSGT00390000002060.r #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b.b #36
Bos_a	ANCESTRAL SPECIES	11	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d.e	ENSGT00940000157997 #15	ENSGT00390000002060.r #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b.b #36
Wild yak	MODERN SPECIES	1156												ENSBMUG00000013908 #17	CCND3 (ENSBMUG00000013874) #18	TAF8 (ENSBMUG00000013819) #19	GUCA1ANB (ENSBMUG00000013778) #21	GUCA1A (ENSBMUG00000013768) #22	GUCA1B (ENSBMUG00000013755) #23	MRPS10 (ENSBMUG00000013745) #24	TRERF1 (ENSBMUG00000013691) #26	UBR2 (ENSBMUG00000013552) #27	PRPH2 (ENSBMUG00000013438) #28	TBCC (ENSBMUG00000013422)	BICRAL (ENSBMUG00000013399) #29	ENSBMUG00000013358	ENSBMUG00000013347	PTCRA (ENSBMUG00000013333) #30	CNPY3 (ENSBMUG00000013282) #31	GNMT (ENSBMUG00000013269) #32	PEX6 (ENSBMUG00000013236) #33	PPP2R5D (ENSBMUG00000013174) #35	ENSBMUG00000013090 #36
Domestic yak	MODERN SPECIES	16	FOXP4 (ENSBGRG00000022828) #9	MDFI (ENSBGRG00000022743) #10	TFEB (ENSBGRG00000022682) #11	PGC (ENSBGRG00000022647) #12	FRS3 (ENSBGRG00000022595) #13	PRICKLE4 (ENSBGRG00000022533) #14	ENSBGRG00000022501	USP49 (ENSBGRG00000022467) #15	MED20 (ENSBGRG00000022427) #16	BYSL (ENSBGRG00000022371) #17	CCND3 (ENSBGRG00000022113) #18	TAF8 (ENSBGRG00000022040) #19	C6orf132 (ENSBGRG00000022013) #20	ENSBGRG00000021988 #21	ENSBGRG00000021973 #21	GUCA1A (ENSBGRG00000021900) #22	GUCA1B (ENSBGRG00000021864) #23	ENSBGRG00000021850	MRPS10 (ENSBGRG00000021770) #24	TRERF1 (ENSBGRG00000021627) #26	UBR2 (ENSBGRG00000021453) #27	PRPH2 (ENSBGRG00000021410) #28	TBCC (ENSBGRG00000021407)	BICRAL (ENSBGRG00000021301) #29	ENSBGRG00000021224	ENSBGRG00000021209	ENSBGRG00000021144 #30	CNPY3 (ENSBGRG00000021055) #31	GNMT (ENSBGRG00000021025) #32	PEX6 (ENSBGRG00000020837) #33	PPP2R5D (ENSBGRG00000020696) #35
Bos_b	ANCESTRAL SPECIES	8	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d.e	ENSGT00940000157997 #15	ENSGT00390000002060.r #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.a.a.a.a.a	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A.a #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35
Hybrid Bos Indicus	MODERN SPECIES	15	ENSBIXG00005009467 #7	ENSBIXG00005009449	ENSBIXG00005000498	FOXP4 (ENSBIXG00005009430) #9	MDFI (ENSBIXG00005009374) #10	TFEB (ENSBIXG00005000479) #11	PGC (ENSBIXG00005000442) #12	FRS3 (ENSBIXG00005009263) #13	PRICKLE4 (ENSBIXG00005009243) #14	USP49 (ENSBIXG00005009223) #15	BYSL (ENSBIXG00005000413) #17	CCND3 (ENSBIXG00005006095) #18	TAF8 (ENSBIXG00005009126) #19	C6orf132 (ENSBIXG00005009101) #20	GUCA1ANB (ENSBIXG00005009098) #21	GUCA1A (ENSBIXG00005009093) #22	GUCA1B (ENSBIXG00005009059) #23	MRPS10 (ENSBIXG00005009037) #24	ENSBIXG00005009021	TRERF1 (ENSBIXG00005009007) #26	UBR2 (ENSBIXG00005008939) #27	ENSBIXG00005008847	PRPH2 (ENSBIXG00005008840) #28	TBCC (ENSBIXG00005000284)	BICRAL (ENSBIXG00005008820) #29	ENSBIXG00005008804	ENSBIXG00005008792	PTCRA (ENSBIXG00005008784) #30	CNPY3 (ENSBIXG00005008771) #31	GNMT (ENSBIXG00005008752) #32	PEX6 (ENSBIXG00005008736) #33
Cow	MODERN SPECIES	15	ENSBTAG00000050887	FOXP4 (ENSBTAG00000014211) #9	MDFI (ENSBTAG00000019343) #10	TFEB (ENSBTAG00000012384) #11	PGC (ENSBTAG00000003818) #12	FRS3 (ENSBTAG00000009861) #13	PRICKLE4 (ENSBTAG00000038916) #14	TOMM6 (ENSBTAG00000008977)	USP49 (ENSBTAG00000008981) #15	MED20 (ENSBTAG00000010100) #16	BYSL (ENSBTAG00000010101) #17	CCND3 (ENSBTAG00000010106) #18	TAF8 (ENSBTAG00000011339) #19	C23H6orf132 (ENSBTAG00000051116) #20	MGC137036 (ENSBTAG00000012822) #21	GUCA1A (ENSBTAG00000051956) #22	GUCA1B (ENSBTAG00000012439) #23	MRPS10 (ENSBTAG00000015301) #24	ENSBTAG00000053124	TRERF1 (ENSBTAG00000015321) #26	UBR2 (ENSBTAG00000005967) #27	PRPH2 (ENSBTAG00000005971) #28	TBCC (ENSBTAG00000000940)	BICRAL (ENSBTAG00000014814) #29	RPL7L1 (ENSBTAG00000018478)	ENSBTAG00000052790	PTCRA (ENSBTAG00000017097) #30	CNPY3 (ENSBTAG00000015900) #31	GNMT (ENSBTAG00000051534) #32	ENSBTAG00000051935 #31	ENSBTAG00000051409 #32
American bison	MODERN SPECIES	3345	ENSBBBG00000017351 #7	ENSBBBG00000017366	FOXP4 (ENSBBBG00000007431) #9	MDFI (ENSBBBG00000017452) #10	TFEB (ENSBBBG00000017522) #11	PGC (ENSBBBG00000004344) #12	FRS3 (ENSBBBG00000017554) #13	PRICKLE4 (ENSBBBG00000007501) #14	TOMM6 (ENSBBBG00000008454)	USP49 (ENSBBBG00000017606) #15	MED20 (ENSBBBG00000017618) #16	BYSL (ENSBBBG00000004364) #17	CCND3 (ENSBBBG00000017683) #18	ENSBBBG00000006963	GUCA1ANB (ENSBBBG00000017711) #21	GUCA1A (ENSBBBG00000017728) #22	GUCA1B (ENSBBBG00000017738) #23	MRPS10 (ENSBBBG00000017751) #24	TRERF1 (ENSBBBG00000007621) #26	UBR2 (ENSBBBG00000007799) #27	PRPH2 (ENSBBBG00000017979) #28	TBCC (ENSBBBG00000004425)	BICRAL (ENSBBBG00000018018) #29	ENSBBBG00000004435	ENSBBBG00000018041	ENSBBBG00000004438 #30	CNPY3 (ENSBBBG00000018061) #31	GNMT (ENSBBBG00000018085) #32	PEX6 (ENSBBBG00000018126) #33	PPP2R5D (ENSBBBG00000004468) #35	ENSBBBG00000018242 #36
Caprinae	ANCESTRAL SPECIES	16	ENSGT01030000234811	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.d	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b.k.a.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927.i.b #36
Goat	MODERN SPECIES	15	ENSCHIG00000023956	FOXP4 (ENSCHIG00000007860) #9	MDFI (ENSCHIG00000020376) #10	TFEB (ENSCHIG00000014684) #11	PGC (ENSCHIG00000013333) #12	FRS3 (ENSCHIG00000014434) #13	PRICKLE4 (ENSCHIG00000021416) #14	TOMM6 (ENSCHIG00000013364)	USP49 (ENSCHIG00000013872) #15	MED20 (ENSCHIG00000011055) #16	BYSL (ENSCHIG00000017590) #17	CCND3 (ENSCHIG00000026950) #18	TAF8 (ENSCHIG00000018137) #19	C6orf132 (ENSCHIG00000025468) #20	GUCA1ANB (ENSCHIG00000015563) #21	GUCA1A (ENSCHIG00000011263) #22	GUCA1B (ENSCHIG00000013876) #23	MRPS10 (ENSCHIG00000022930) #24	TRERF1 (ENSCHIG00000012508) #26	UBR2 (ENSCHIG00000010493) #27	PRPH2 (ENSCHIG00000017037) #28	TBCC (ENSCHIG00000010738)	BICRAL (ENSCHIG00000011817) #29	ENSCHIG00000010307	PTCRA (ENSCHIG00000010829) #30	CNPY3 (ENSCHIG00000015552) #31	GNMT (ENSCHIG00000026364) #32	PEX6 (ENSCHIG00000009174) #33	PPP2R5D (ENSCHIG00000018710) #35	ENSCHIG00000025491 #36	KLHDC3 (ENSCHIG00000011426) #37
Siberian musk deer	MODERN SPECIES	355	ENSMMSG00000009113 #7	FOXP4 (ENSMMSG00000009149) #9	MDFI (ENSMMSG00000009206) #10	TFEB (ENSMMSG00000009290) #11	PGC (ENSMMSG00000009351) #12	FRS3 (ENSMMSG00000009397) #13	PRICKLE4 (ENSMMSG00000009426) #14	ENSMMSG00000009479	USP49 (ENSMMSG00000009496) #15	MED20 (ENSMMSG00000009591) #16	BYSL (ENSMMSG00000009619) #17	CCND3 (ENSMMSG00000009679) #18	TAF8 (ENSMMSG00000010017) #19	C6orf132 (ENSMMSG00000010088) #20	ENSMMSG00000010105 #21	GUCA1A (ENSMMSG00000010121) #22	GUCA1B (ENSMMSG00000010149) #23	MRPS10 (ENSMMSG00000010176) #24	TRERF1 (ENSMMSG00000010234) #26	UBR2 (ENSMMSG00000010934) #27	ENSMMSG00000011915	PRPH2 (ENSMMSG00000011927) #28	TBCC (ENSMMSG00000011946)	BICRAL (ENSMMSG00000011972) #29	ENSMMSG00000012034	ENSMMSG00000012048	PTCRA (ENSMMSG00000012068) #30	CNPY3 (ENSMMSG00000004545) #31	GNMT (ENSMMSG00000004609) #32	PEX6 (ENSMMSG00000004652) #33	PPP2R5D (ENSMMSG00000004753) #35
Yarkand deer	MODERN SPECIES	30	ENSCHYG00000021679	FOXP4 (ENSCHYG00000021715) #9	MDFI (ENSCHYG00000021941) #10	TFEB (ENSCHYG00000022019) #11	PGC (ENSCHYG00000022185) #12	FRS3 (ENSCHYG00000022265) #13	PRICKLE4 (ENSCHYG00000022333) #14	ENSCHYG00000022418	USP49 (ENSCHYG00000022449) #15	MED20 (ENSCHYG00000022551) #16	BYSL (ENSCHYG00000022603) #17	CCND3 (ENSCHYG00000022707) #18	TAF8 (ENSCHYG00000022865) #19	C6orf132 (ENSCHYG00000023077) #20	GUCA1ANB (ENSCHYG00000023137) #21	GUCA1A (ENSCHYG00000023170) #22	ENSCHYG00000023213 #23	TRERF1 (ENSCHYG00000000229) #26	UBR2 (ENSCHYG00000000408) #27	PRPH2 (ENSCHYG00000000711) #28	TBCC (ENSCHYG00000000724)	BICRAL (ENSCHYG00000000738) #29	ENSCHYG00000000787	ENSCHYG00000000813	PTCRA (ENSCHYG00000000824) #30	CNPY3 (ENSCHYG00000000840) #31	GNMT (ENSCHYG00000000864) #32	PEX6 (ENSCHYG00000000888) #33	PPP2R5D (ENSCHYG00000000975) #35	ENSCHYG00000001147 #36	KLHDC3 (ENSCHYG00000001209) #37
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Xenarthra	ANCESTRAL SPECIES	2	ENSGT00680000101580	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Armadillo	MODERN SPECIES	1977	FOXP4 (ENSDNOG00000048023) #9	MDFI (ENSDNOG00000009771) #10	TFEB (ENSDNOG00000042176) #11	PGC (ENSDNOG00000033789) #12	FRS3 (ENSDNOG00000015972) #13	PRICKLE4 (ENSDNOG00000015976) #14	TOMM6 (ENSDNOG00000025602)	USP49 (ENSDNOG00000045633) #15	ENSDNOG00000046911	ENSDNOG00000016666 #16	BYSL (ENSDNOG00000016670) #17	CCND3 (ENSDNOG00000032518) #18	TAF8 (ENSDNOG00000002853) #19	C6orf132 (ENSDNOG00000043925) #20	ENSDNOG00000049672 #21	GUCA1A (ENSDNOG00000034168) #22	GUCA1B (ENSDNOG00000014835) #23	ENSDNOG00000046262 #24
Afrotheria	ANCESTRAL SPECIES	24	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Afrotheria_a	ANCESTRAL SPECIES	23	ENSGT00940000153835.a.b.c.a.b #8	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000164010	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00940000157530.a #23	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00940000167232	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Elephant	MODERN SPECIES	1	ENSLAFG00000002636 #8	FOXP4 (ENSLAFG00000022762) #9	MDFI (ENSLAFG00000031523) #10	TFEB (ENSLAFG00000003059) #11	PGC (ENSLAFG00000017145) #12	FRS3 (ENSLAFG00000017154) #13	PRICKLE4 (ENSLAFG00000017160) #14	TOMM6 (ENSLAFG00000020886)	USP49 (ENSLAFG00000017166) #15	MED20 (ENSLAFG00000008885) #16	BYSL (ENSLAFG00000015418) #17	CCND3 (ENSLAFG00000023148) #18	TAF8 (ENSLAFG00000010601) #19	ENSLAFG00000000942	GUCA1ANB (ENSLAFG00000020783) #21	GUCA1A (ENSLAFG00000008087) #22	GUCA1B (ENSLAFG00000000468) #23	MRPS10 (ENSLAFG00000007822) #24	TRERF1 (ENSLAFG00000007825) #26	UBR2 (ENSLAFG00000014978) #27	PRPH2 (ENSLAFG00000015002) #28	TBCC (ENSLAFG00000006994)	BICRAL (ENSLAFG00000013839) #29	RPL7L1 (ENSLAFG00000013854)	ENSLAFG00000021529	PTCRA (ENSLAFG00000008710) #30	CNPY3 (ENSLAFG00000013858) #31	GNMT (ENSLAFG00000013861) #32	PEX6 (ENSLAFG00000013864) #33	PPP2R5D (ENSLAFG00000013874) #35	ENSLAFG00000013881 #36
Tenrec	MODERN SPECIES	2756																ENSETEG00000019835 #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000164965	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.s.a	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36	ENSGT00940000157952 #37	ENSGT00530000064271
Opossum	MODERN SPECIES	1	MDFI (ENSMODG00000047715) #10	ENSMODG00000012910 #12	ENSMODG00000023712	ENSMODG00000044033	USP49 (ENSMODG00000012836) #15	FRS3 (ENSMODG00000046484) #13	ENSMODG00000012839 #14	ENSMODG00000037162	ENSMODG00000049178	MED20 (ENSMODG00000046391) #16	BYSL (ENSMODG00000012808) #17	CCND3 (ENSMODG00000012797) #18	ENSMODG00000012785 #19	ENSMODG00000040176 #20	ENSMODG00000047404 #21	GUCA1A (ENSMODG00000012758) #22	ENSMODG00000012706	ENSMODG00000012700	ENSMODG00000039816	ENSMODG00000051485	MRPS10 (ENSMODG00000019045) #24	TRERF1 (ENSMODG00000019042) #26	UBR2 (ENSMODG00000019037) #27	PRPH2 (ENSMODG00000019032) #28	TBCC (ENSMODG00000018987)	BICRAL (ENSMODG00000019030) #29	RPL7L1 (ENSMODG00000019028)	ENSMODG00000038338 #30	CNPY3 (ENSMODG00000019022) #31	GNMT (ENSMODG00000019018) #32	PEX6 (ENSMODG00000019014) #33
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000158700 #9	ENSGT00940000160187 #10	ENSGT00940000159691 #11	ENSGT00940000160626 #12	ENSGT00940000164965	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.s.a	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22	ENSGT00390000009045 #24	ENSGT00940000160303.b #26	ENSGT00950000183075.a.a.a.a #27	ENSGT00940000157303 #28	ENSGT00940000162058	ENSGT00940000159766 #29	ENSGT00950000182878.b.b	ENSGT01020000231049	ENSGT01030000235681	ENSGT00390000007712 #30	ENSGT00390000014072.A #31	ENSGT00390000006845 #32	ENSGT00550000074953 #33	ENSGT01030000234620.a.a.a.b #35	ENSGT00390000016927 #36
Diprotodontia	ANCESTRAL SPECIES	105					ENSGT00940000164965	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.s.a	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22
Diprotodontia_a	ANCESTRAL SPECIES	97					ENSGT00940000164965	ENSGT00940000159495 #13	ENSGT00940000161789 #14	ENSGT00390000002376.s.a	ENSGT00940000157997 #15	ENSGT00390000002060 #16	ENSGT00390000007241 #17	ENSGT00940000160743 #18	ENSGT00390000017567 #19	ENSGT00940000163431 #20	ENSGT00390000014226 #21	ENSGT00940000160607 #22
koala	MODERN SPECIES	395						FRS3 (ENSPCIG00000025895) #13	ENSPCIG00000025894 #14	ENSPCIG00000025893	USP49 (ENSPCIG00000025892) #15	MED20 (ENSPCIG00000025891) #16	BYSL (ENSPCIG00000025889) #17	CCND3 (ENSPCIG00000025888) #18	TAF8 (ENSPCIG00000025887) #19	ENSPCIG00000031965 #20	ENSPCIG00000032038 #21	GUCA1A (ENSPCIG00000025884) #22	ENSPCIG00000034190	ENSPCIG00000025879
Wallaby	MODERN SPECIES	73																ENSMEUG00000013787 #22
Tasmanian devil	MODERN SPECIES	3	FOXP4 (ENSSHAG00000021467) #9	MDFI (ENSSHAG00000008515) #10	TFEB (ENSSHAG00000009705) #11	PGC (ENSSHAG00000010293) #12	ENSSHAG00000010582	FRS3 (ENSSHAG00000023844) #13	ENSSHAG00000010776	ENSSHAG00000025322 #14	MED20 (ENSSHAG00000010951) #16	USP49 (ENSSHAG00000021910) #15	BYSL (ENSSHAG00000003954) #17	ENSSHAG00000004385 #18	ENSSHAG00000024224 #19	C6orf132 (ENSSHAG00000004734) #20	ENSSHAG00000031266 #21	GUCA1A (ENSSHAG00000006248) #22	ENSSHAG00000002008	ENSSHAG00000007210	ENSSHAG00000030492	ENSSHAG00000004955	ENSSHAG00000029849	ENSSHAG00000031666	ENSSHAG00000029599	ENSSHAG00000001704	MRPS10 (ENSSHAG00000031320) #24	TRERF1 (ENSSHAG00000004599) #26	ENSSHAG00000030340	UBR2 (ENSSHAG00000009287) #27	PRPH2 (ENSSHAG00000001537) #28	TBCC (ENSSHAG00000028400)	BICRAL (ENSSHAG00000010942) #29