Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000158840 #22
Gnathostomata	ANCESTRAL SPECIES	1092														ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22
Euteleostomi	ANCESTRAL SPECIES	686														ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25
Sarcopterygii	ANCESTRAL SPECIES	356										ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665
Tetrapoda	ANCESTRAL SPECIES	127	ENSGT00940000154810	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00390000007535	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665
Amniota	ANCESTRAL SPECIES	4	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000162445	ENSGT01050000244941.A	ENSGT00940000158226
Mammalia	ANCESTRAL SPECIES	24	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000162445	ENSGT00940000156061
Theria	ANCESTRAL SPECIES	30	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810
Eutheria	ANCESTRAL SPECIES	7	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Primates	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT01000000214430.a.a.a.a.a.b.a	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535.g.a	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Cebidae	ANCESTRAL SPECIES	7	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.a.a	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535.g.a	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Cebidae_a	ANCESTRAL SPECIES	14												ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00990000203951	ENSGT00390000007535.g.a	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269
Capuchin	MODERN SPECIES	403					ARSK (ENSCCAG00000022472) #11	RFESD (ENSCCAG00000018128) #12	SPATA9 (ENSCCAG00000018911) #13	ENSCCAG00000021708 #14	RHOBTB3 (ENSCCAG00000018312) #15	GLRX (ENSCCAG00000036906) #16	ENSCCAG00000028747 #17	ELL2 (ENSCCAG00000020875) #18	PCSK1 (ENSCCAG00000029470) #19	CAST (ENSCCAG00000024427) #20	ERAP1 (ENSCCAG00000025109) #21	TEK (ENSCCAG00000033237) #22	ENSCCAG00000026397 #23	EQTN (ENSCCAG00000028124) #24	MOB3B (ENSCCAG00000029698) #25	C9orf72 (ENSCCAG00000018725) #26
Bolivian squirrel monkey	MODERN SPECIES	159												CAAP1 (ENSSBOG00000023545)	PLAA (ENSSBOG00000032322)	IFT74 (ENSSBOG00000026591)	LRRC19 (ENSSBOG00000022112)	TEK (ENSSBOG00000025527) #22	ENSSBOG00000029262 ##23	ENSSBOG00000016954	EQTN (ENSSBOG00000023038) #24	MOB3B (ENSSBOG00000032815) #25	ENSSBOG00000025861	C9orf72 (ENSSBOG00000020619) #26	LINGO2 (ENSSBOG00000036332)	ENSSBOG00000023911	ENSSBOG00000024405	ENSSBOG00000024689	ACO1 (ENSSBOG00000026008)	RIGI (ENSSBOG00000030627)	TOPORS (ENSSBOG00000003396)	ENSSBOG00000020460	NDUFB6 (ENSSBOG00000021167)
Marmoset	MODERN SPECIES		ENSCJAG00000079951	ENSCJAG00000065871	ELAVL2 (ENSCJAG00000008064)	ENSCJAG00000060971	IZUMO3 (ENSCJAG00000080921)	TUSC1 (ENSCJAG00000043194)	ENSCJAG00000085985	ENSCJAG00000056845	ENSCJAG00000059870	CAAP1 (ENSCJAG00000007987)	PLAA (ENSCJAG00000007921)	ENSCJAG00000053641	ENSCJAG00000085474	IFT74 (ENSCJAG00000018308)	LRRC19 (ENSCJAG00000064085)	TEK (ENSCJAG00000018394) #22	ENSCJAG00000045877 ##23	EQTN (ENSCJAG00000018426) #24	MOB3B (ENSCJAG00000038687) #25	C9orf72 (ENSCJAG00000018440) #26	ENSCJAG00000085908	ENSCJAG00000074984	LINGO2 (ENSCJAG00000022711)	ENSCJAG00000086137	ENSCJAG00000073555	ACO1 (ENSCJAG00000007687)	RIGI (ENSCJAG00000007741)	TOPORS (ENSCJAG00000007840)	SMIM27 (ENSCJAG00000073262)	ENSCJAG00000007852	TMEM215 (ENSCJAG00000041764)
Mas night monkey	MODERN SPECIES	654												CAAP1 (ENSANAG00000034326)	PLAA (ENSANAG00000023557)	IFT74 (ENSANAG00000025475)	LRRC19 (ENSANAG00000027677)	TEK (ENSANAG00000031203) #22	ENSANAG00000027869 #24	MOB3B (ENSANAG00000027904) #25	IFNK (ENSANAG00000003023)	C9orf72 (ENSANAG00000022787) #26	LINGO2 (ENSANAG00000031178)	ENSANAG00000020227	ENSANAG00000026410	ENSANAG00000024670	ACO1 (ENSANAG00000003359)	RIGI (ENSANAG00000031893)	TOPORS (ENSANAG00000030535)	ENSANAG00000026114	ENSANAG00000029630	TMEM215 (ENSANAG00000031329)	APTX (ENSANAG00000030160)
Catarrhini	ANCESTRAL SPECIES	13	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806
Hominoidea	ANCESTRAL SPECIES	23	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806
Hominidae	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806
Homo/Pan group	ANCESTRAL SPECIES	27	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806
Pan	ANCESTRAL SPECIES	26	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00990000203951	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806
Chimpanzee	MODERN SPECIES	22	MTAP (ENSPTRG00000020825)	CDKN2A (ENSPTRG00000020827)	CDKN2B (ENSPTRG00000049465)	ENSPTRG00000043190	DMRTA1 (ENSPTRG00000050201)	MTRNR2L14 (ENSPTRG00000042327)	ENSPTRG00000051343	ENSPTRG00000047423	ELAVL2 (ENSPTRG00000020830)	IZUMO3 (ENSPTRG00000029308)	TUSC1 (ENSPTRG00000029307)	CAAP1 (ENSPTRG00000020831)	PLAA (ENSPTRG00000020832)	IFT74 (ENSPTRG00000020833)	LRRC19 (ENSPTRG00000020834)	TEK (ENSPTRG00000020835) #22	EQTN (ENSPTRG00000020836) #24	MOB3B (ENSPTRG00000020837) #25	IFNK (ENSPTRG00000020838)	C9orf72 (ENSPTRG00000020839) #26	ENSPTRG00000043260	LINGO2 (ENSPTRG00000020840)	ACO1 (ENSPTRG00000020843)	RIGI (ENSPTRG00000020844)	TOPORS (ENSPTRG00000029303)	ENSPTRG00000046844	NDUFB6 (ENSPTRG00000020846)	TAF1L (ENSPTRG00000020848)	TMEM215 (ENSPTRG00000047390)	ENSPTRG00000049671	APTX (ENSPTRG00000020850)
Bonobo	MODERN SPECIES	22	IFNA2 (ENSPPAG00000021138)	IFNA8 (ENSPPAG00000011307)	ENSPPAG00000031511	IFNE (ENSPPAG00000011111)	MTAP (ENSPPAG00000038109)	ENSPPAG00000038507	CDKN2B (ENSPPAG00000037066)	DMRTA1 (ENSPPAG00000031441)	ELAVL2 (ENSPPAG00000041539)	IZUMO3 (ENSPPAG00000043400)	ENSPPAG00000035721	CAAP1 (ENSPPAG00000037255)	PLAA (ENSPPAG00000040082)	IFT74 (ENSPPAG00000000306)	LRRC19 (ENSPPAG00000012895)	TEK (ENSPPAG00000034261) #22	EQTN (ENSPPAG00000042132) #24	MOB3B (ENSPPAG00000042835) #25	C9orf72 (ENSPPAG00000028395) #26	ENSPPAG00000000049	LINGO2 (ENSPPAG00000033214)	ENSPPAG00000031228	ACO1 (ENSPPAG00000033498)	RIGI (ENSPPAG00000041750)	TOPORS (ENSPPAG00000043192)	NDUFB6 (ENSPPAG00000038130)	TAF1L (ENSPPAG00000003030)	TMEM215 (ENSPPAG00000007092)	ENSPPAG00000030062	APTX (ENSPPAG00000030295)	ENSPPAG00000043485
Human	MODERN SPECIES	21	IFNA2 (ENSG00000188379)	IFNA8 (ENSG00000120242)	IFNA1 (ENSG00000197919)	IFNE (ENSG00000184995)	MTAP (ENSG00000099810)	CDKN2A (ENSG00000147889)	CDKN2B (ENSG00000147883)	DMRTA1 (ENSG00000176399)	ELAVL2 (ENSG00000107105)	IZUMO3 (ENSG00000205442)	TUSC1 (ENSG00000198680)	CAAP1 (ENSG00000120159)	PLAA (ENSG00000137055)	IFT74 (ENSG00000096872)	LRRC19 (ENSG00000184434)	TEK (ENSG00000120156) #22	EQTN (ENSG00000120160) #24	MOB3B (ENSG00000120162) #25	IFNK (ENSG00000147896)	C9orf72 (ENSG00000147894) #26	LINGO2 (ENSG00000174482)	ACO1 (ENSG00000122729)	RIGI (ENSG00000107201)	ENSG00000288684	TOPORS (ENSG00000197579)	SMIM27 (ENSG00000235453)	NDUFB6 (ENSG00000165264)	TAF1L (ENSG00000122728)	TMEM215 (ENSG00000188133)	APTX (ENSG00000137074)	DNAJA1 (ENSG00000086061)
Gorilla	MODERN SPECIES	22	IFNA1 (ENSGGOG00000038600)	IFNA2 (ENSGGOG00000026395)	IFNA13 (ENSGGOG00000036801)	IFNE (ENSGGOG00000015760)	MTAP (ENSGGOG00000012929)	CDKN2A (ENSGGOG00000024454)	CDKN2B (ENSGGOG00000042843)	DMRTA1 (ENSGGOG00000009094)	ELAVL2 (ENSGGOG00000003678)	IZUMO3 (ENSGGOG00000011508)	TUSC1 (ENSGGOG00000004137)	CAAP1 (ENSGGOG00000015329)	ENSGGOG00000016635	LRRC19 (ENSGGOG00000036824)	IFT74 (ENSGGOG00000007259)	TEK (ENSGGOG00000015924) #22	EQTN (ENSGGOG00000013734) #24	MOB3B (ENSGGOG00000004602) #25	IFNK (ENSGGOG00000027413)	C9orf72 (ENSGGOG00000006338) #26	ENSGGOG00000036154	LINGO2 (ENSGGOG00000013148)	ENSGGOG00000006944	ENSGGOG00000041344	ACO1 (ENSGGOG00000016306)	DDX58 (ENSGGOG00000016335)	TOPORS (ENSGGOG00000023417)	ENSGGOG00000042900	NDUFB6 (ENSGGOG00000010253)	TMEM215 (ENSGGOG00000043117)	ENSGGOG00000027578
Orangutan	MODERN SPECIES	22	IFNA8 (ENSPPYG00000033446)	ENSPPYG00000035735	ENSPPYG00000035351	MTAP (ENSPPYG00000019171)	ENSPPYG00000030927	CDKN2A (ENSPPYG00000019169)	CDKN2B (ENSPPYG00000019168)	DMRTA1 (ENSPPYG00000019167)	ELAVL2 (ENSPPYG00000019166)	IZUMO3 (ENSPPYG00000038165)	TUSC1 (ENSPPYG00000019164)	CAAP1 (ENSPPYG00000025841)	PLAA (ENSPPYG00000019161)	LRRC19 (ENSPPYG00000019160)	IFT74 (ENSPPYG00000019159)	TEK (ENSPPYG00000019158) #22	EQTN (ENSPPYG00000019157) #24	IFNK (ENSPPYG00000019155)	MOB3B (ENSPPYG00000019156) #25	C9orf72 (ENSPPYG00000019154) #26	LINGO2 (ENSPPYG00000019153)	ACO1 (ENSPPYG00000019150)	RIGI (ENSPPYG00000019149)	TOPORS (ENSPPYG00000036532)	SMIM27 (ENSPPYG00000039511)	NDUFB6 (ENSPPYG00000019146)	TAF1L (ENSPPYG00000019145)	TMEM215 (ENSPPYG00000019144)	APTX (ENSPPYG00000019142)	ENSPPYG00000037290	DNAJA1 (ENSPPYG00000019141)
Gibbon	MODERN SPECIES	23	SNX30 (ENSNLEG00000028611)	INIP (ENSNLEG00000016554)	ENSNLEG00000016552	ENSNLEG00000031382	PTBP3 (ENSNLEG00000029589)	SUSD1 (ENSNLEG00000016452)	UGCG (ENSNLEG00000016446)	SHOC1 (ENSNLEG00000016401)	DMRTA1 (ENSNLEG00000035351)	ELAVL2 (ENSNLEG00000016382)	IZUMO3 (ENSNLEG00000016378)	CAAP1 (ENSNLEG00000016367)	PLAA (ENSNLEG00000016346)	ENSNLEG00000016344	ENSNLEG00000016321	TEK (ENSNLEG00000016282) #22	FAM205A (ENSNLEG00000016276)	TOPORS (ENSNLEG00000005371)	ENSNLEG00000030141	NDUFB6 (ENSNLEG00000005361)	TAF1L (ENSNLEG00000005354)	TMEM215 (ENSNLEG00000031457)	APTX (ENSNLEG00000032184)	ENSNLEG00000005268	SMU1 (ENSNLEG00000005238)	B4GALT1 (ENSNLEG00000034053)	SPINK4 (ENSNLEG00000005213)	BAG1 (ENSNLEG00000030668)	CHMP5 (ENSNLEG00000034816)	NFX1 (ENSNLEG00000005096)	ENSNLEG00000005087
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00990000203951	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00990000203951	ENSGT00390000007535	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00910000147619	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000164672.b	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00940000155242.n	ENSGT00990000203951	ENSGT00390000007535.i.a	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b
Macaca	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00910000147619	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000183134.c.b.p	ENSGT00390000009366.c.a.b	ENSGT00390000009349.g	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00940000155242.n	ENSGT00990000203951	ENSGT00390000007535.i.a
Pig-tailed macaque	MODERN SPECIES	206	SLC5A8 (ENSMNEG00000044791)	ANO4 (ENSMNEG00000035796)	ENSMNEG00000038922	GAS2L3 (ENSMNEG00000043688)	ENSMNEG00000034160	NR1H4 (ENSMNEG00000029077)	SLC17A8 (ENSMNEG00000034787)	SCYL2 (ENSMNEG00000039352)	ACTR6 (ENSMNEG00000045418)	BLTP3B (ENSMNEG00000036255)	ENSMNEG00000000447	CAAP1 (ENSMNEG00000038989)	PLAA (ENSMNEG00000026616)	IFT74 (ENSMNEG00000031183)	LRRC19 (ENSMNEG00000030147)	TEK (ENSMNEG00000036308) #22	EQTN (ENSMNEG00000012016) #24	MOB3B (ENSMNEG00000032479) #25	C9orf72 (ENSMNEG00000032167) #26	LINGO2 (ENSMNEG00000014874)
Macaca_a	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h	ENSGT01000000214430.a.a.a.a.a.a.d	ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g	ENSGT00940000156051.mc.b	ENSGT00950000182991.B.yb.a	ENSGT00940000162423	ENSGT00940000160640	ENSGT00910000147619	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.a.b.b.a	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00390000009366.c.a.b	ENSGT00390000009349.g	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00940000156806
Crab-eating macaque	MODERN SPECIES	6	IFNA6 (ENSMFAG00000017071)	ENSMFAG00000049642	ENSMFAG00000052004	IFNA8 (ENSMFAG00000053442)	ENSMFAG00000047167	ENSMFAG00000057421	ENSMFAG00000048577	ENSMFAG00000058938	ENSMFAG00000001876	ELAVL2 (ENSMFAG00000039694)	IZUMO3 (ENSMFAG00000031898)	CAAP1 (ENSMFAG00000036918)	PLAA (ENSMFAG00000039014)	LRRC19 (ENSMFAG00000034288)	IFT74 (ENSMFAG00000001877)	TEK (ENSMFAG00000045003) #22	ENSMFAG00000064223	EQTN (ENSMFAG00000043911) #24	IFNK (ENSMFAG00000052624)	MOB3B (ENSMFAG00000041346) #25	C9orf72 (ENSMFAG00000001152) #26	ENSMFAG00000061659	ENSMFAG00000055404	ENSMFAG00000062403	ENSMFAG00000026508	ENSMFAG00000023811	ACO1 (ENSMFAG00000001702)	RIGI (ENSMFAG00000045674)	SMIM27 (ENSMFAG00000040652)	TOPORS (ENSMFAG00000000541)	TAF1L (ENSMFAG00000044417)
Rhesus	MODERN SPECIES	6	IFNA13 (ENSMMUG00000051298)	ENSMMUG00000063104	MTAP (ENSMMUG00000001137)	CDKN2B (ENSMMUG00000001134)	ENSMMUG00000065070	DMRTA1 (ENSMMUG00000054138)	ENSMMUG00000053595	ELAVL2 (ENSMMUG00000010038)	IZUMO3 (ENSMMUG00000059096)	TUSC1 (ENSMMUG00000059471)	ENSMMUG00000059255	CAAP1 (ENSMMUG00000006073)	PLAA (ENSMMUG00000064752)	LRRC19 (ENSMMUG00000006079)	IFT74 (ENSMMUG00000006076)	TEK (ENSMMUG00000006080) #22	ENSMMUG00000053713	EQTN (ENSMMUG00000061449) #24	IFNK (ENSMMUG00000064869)	MOB3B (ENSMMUG00000062843) #25	C9orf72 (ENSMMUG00000016508) #26	LINGO2 (ENSMMUG00000017199)	ENSMMUG00000049422	ENSMMUG00000058851	ENSMMUG00000018233	ENSMMUG00000006052	ACO1 (ENSMMUG00000008196)	RIGI (ENSMMUG00000012442)	SMIM27 (ENSMMUG00000060453)	TOPORS (ENSMMUG00000002686)	TAF1L (ENSMMUG00000007965)
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00910000147619	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000164672.b	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00940000155242.n	ENSGT00390000006684	ENSGT00390000004524.c.a.a.a.a.a.b	ENSGT00940000156806	ENSGT00410000025802.g.a.n	ENSGT00940000153558.b.i.a
Olive baboon	MODERN SPECIES	4	DMRTA1 (ENSPANG00000029682)	ELAVL2 (ENSPANG00000025263)	ENSPANG00000050863	ENSPANG00000039181	ENSPANG00000045330	IZUMO3 (ENSPANG00000025266)	TUSC1 (ENSPANG00000049859)	ENSPANG00000039634	ENSPANG00000041329	CAAP1 (ENSPANG00000025265)	PLAA (ENSPANG00000025264)	ENSPANG00000044640	IFT74 (ENSPANG00000025276)	ENSPANG00000049233	LRRC19 (ENSPANG00000036052)	TEK (ENSPANG00000025275) #22	EQTN (ENSPANG00000025274) #24	IFNK (ENSPANG00000037270)	C9orf72 (ENSPANG00000025272) #26	ENSPANG00000046846	LINGO2 (ENSPANG00000015960)	ENSPANG00000038383	ENSPANG00000039715	ENSPANG00000044228	ACO1 (ENSPANG00000025270)	RIGI (ENSPANG00000025269)	TOPORS (ENSPANG00000025293)	SMIM27 (ENSPANG00000035791)	TAF1L (ENSPANG00000025302)	TMEM215 (ENSPANG00000004499)	APTX (ENSPANG00000025301)
Cercopithecinae_d	ANCESTRAL SPECIES	172	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.b.b.b	ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.yb.a	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000153593.c.b.d.a	ENSGT00940000160640	ENSGT00910000147619	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00950000182767.b.b.d.hb.a.a.b	ENSGT00940000156665
Sooty mangabey	MODERN SPECIES	170	IFNA6 (ENSCATG00000022888)	IFNE (ENSCATG00000042094)	MTAP (ENSCATG00000041286)	CDKN2A (ENSCATG00000009720)	CDKN2B (ENSCATG00000036130)	ENSCATG00000044350	DMRTA1 (ENSCATG00000034725)	ENSCATG00000039863	ELAVL2 (ENSCATG00000012522)	IZUMO3 (ENSCATG00000042543)	CAAP1 (ENSCATG00000045198)	PLAA (ENSCATG00000019480)	ENSCATG00000040114	LRRC19 (ENSCATG00000034126)	IFT74 (ENSCATG00000033075)	TEK (ENSCATG00000033710) #22	EQTN (ENSCATG00000010354) #24	MOB3B (ENSCATG00000039675) #25	C9orf72 (ENSCATG00000021978) #26	ENSCATG00000036469	LINGO2 (ENSCATG00000021429)	ENSCATG00000042284	ENSCATG00000020213
Drill	MODERN SPECIES	1140											CAAP1 (ENSMLEG00000028782)	PLAA (ENSMLEG00000037098)	IFT74 (ENSMLEG00000031327)	ENSMLEG00000010329	ENSMLEG00000034932	TEK (ENSMLEG00000038804) #22	EQTN (ENSMLEG00000039467) #24	MOB3B (ENSMLEG00000033020) #25	C9orf72 (ENSMLEG00000030088) #26	ENSMLEG00000032991	LINGO2 (ENSMLEG00000011581)
Vervet Monkey	MODERN SPECIES	3	IFNA2 (ENSCSAG00000009666)	IFNA8 (ENSCSAG00000009673)	ENSCSAG00000000440	IFNE (ENSCSAG00000009680)	MTAP (ENSCSAG00000009686)	ENSCSAG00000009696	CDKN2B (ENSCSAG00000009704)	DMRTA1 (ENSCSAG00000009709)	ELAVL2 (ENSCSAG00000009718)	IZUMO3 (ENSCSAG00000009727)	TUSC1 (ENSCSAG00000000441)	CAAP1 (ENSCSAG00000009734)	PLAA (ENSCSAG00000009742)	LRRC19 (ENSCSAG00000009756)	IFT74 (ENSCSAG00000009766)	TEK (ENSCSAG00000009773) #22	ENSCSAG00000000442	EQTN (ENSCSAG00000009785) #24	IFNK (ENSCSAG00000000443)	MOB3B (ENSCSAG00000009793) #25	C9orf72 (ENSCSAG00000009804) #26	ACTB (ENSCSAG00000000444)	LINGO2 (ENSCSAG00000000445)	ACO1 (ENSCSAG00000009824)	RIGI (ENSCSAG00000009834)	TOPORS (ENSCSAG00000009840)	NDUFB6 (ENSCSAG00000009865)	TAF1L (ENSCSAG00000009875)	TMEM215 (ENSCSAG00000000446)	APTX (ENSCSAG00000009885)	ENSCSAG00000009888
Rhinopithecus	ANCESTRAL SPECIES	529												ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665
Black snub-nosed monkey	MODERN SPECIES	285	SF3B1 (ENSRBIG00000026096)	ENSRBIG00000033148	COQ10B (ENSRBIG00000034451)	ENSRBIG00000031908	ENSRBIG00000035189	ENSRBIG00000041973	RFTN2 (ENSRBIG00000026987)	ENSRBIG00000026367	MARS2 (ENSRBIG00000018803)	BOLL (ENSRBIG00000042131)	CAAP1 (ENSRBIG00000031931)	PLAA (ENSRBIG00000032657)	IFT74 (ENSRBIG00000020357)	ENSRBIG00000040901	LRRC19 (ENSRBIG00000004225)	TEK (ENSRBIG00000038089) #22	EQTN (ENSRBIG00000029364) #24	MOB3B (ENSRBIG00000037786) #25	C9orf72 (ENSRBIG00000044562) #26	LINGO2 (ENSRBIG00000015493)
Golden snub-nosed monkey	MODERN SPECIES	2485												CAAP1 (ENSRROG00000045371)	PLAA (ENSRROG00000037294)	LRRC19 (ENSRROG00000042392)	IFT74 (ENSRROG00000028724)	TEK (ENSRROG00000029405) #22	EQTN (ENSRROG00000045135) #24	MOB3B (ENSRROG00000040795) #25	C9orf72 (ENSRROG00000036989) #26	LINGO2 (ENSRROG00000018957)
Tarsier	MODERN SPECIES	3797												CAAP1 (ENSTSYG00000005252)	PLAA (ENSTSYG00000005932)	IFT74 (ENSTSYG00000007990)	LRRC19 (ENSTSYG00000007991)	TEK (ENSTSYG00000013107) #22
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT01000000214430.a.a.a.a.a.a	ENSGT01000000214430.a.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Lemuriformes	ANCESTRAL SPECIES	34	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Mouse lemur	MODERN SPECIES	1	PLPPR1 (ENSMICG00000035820)	ENSMICG00000044981	BAAT (ENSMICG00000042778)	ENSMICG00000045179	ZNF189 (ENSMICG00000011446)	ALDOB (ENSMICG00000011454)	PGAP4 (ENSMICG00000047833)	RNF20 (ENSMICG00000011465)	GRIN3A (ENSMICG00000037515)	CYLC2 (ENSMICG00000046389)	SMC2 (ENSMICG00000015525)	CAAP1 (ENSMICG00000032635)	PLAA (ENSMICG00000007609)	LRRC19 (ENSMICG00000037703)	ENSMICG00000006418	TEK (ENSMICG00000009269) #22	EQTN (ENSMICG00000034150) #24	MOB3B (ENSMICG00000004847) #25	C9orf72 (ENSMICG00000004861) #26	LINGO2 (ENSMICG00000004873)	ENSMICG00000038393	ENSMICG00000031881	TYRP1 (ENSMICG00000017521)	LURAP1L (ENSMICG00000032420)	MPDZ (ENSMICG00000010194)	ENSMICG00000028319	NFIB (ENSMICG00000005833)	ZDHHC21 (ENSMICG00000035489)	CER1 (ENSMICG00000001257)	FREM1 (ENSMICG00000015934)	TTC39B (ENSMICG00000015971)
Lemuriformes_a	ANCESTRAL SPECIES	35	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Greater bamboo lemur	MODERN SPECIES	12				ENSPSMG00000011554	CDKN2A (ENSPSMG00000011521)	CDKN2B (ENSPSMG00000011508)	DMRTA1 (ENSPSMG00000011495)	ELAVL2 (ENSPSMG00000011481)	ENSPSMG00000011445	IZUMO3 (ENSPSMG00000011440)	TUSC1 (ENSPSMG00000011421)	CAAP1 (ENSPSMG00000011411)	PLAA (ENSPSMG00000011393)	LRRC19 (ENSPSMG00000011368)	IFT74 (ENSPSMG00000011354)	TEK (ENSPSMG00000011306) #22	EQTN (ENSPSMG00000011157) #24	MOB3B (ENSPSMG00000011151) #25	IFNK (ENSPSMG00000011141)	C9orf72 (ENSPSMG00000011129) #26	LINGO2 (ENSPSMG00000011106)	ACO1 (ENSPSMG00000011080)	RIGI (ENSPSMG00000011034)	ENSPSMG00000011004	SMIM27 (ENSPSMG00000010981)	NDUFB6 (ENSPSMG00000010969)	TMEM215 (ENSPSMG00000010940)
Coquerels sifaka	MODERN SPECIES	74									ELAVL2 (ENSPCOG00000022819)	ENSPCOG00000028604	ENSPCOG00000021179	IZUMO3 (ENSPCOG00000020881)	CAAP1 (ENSPCOG00000013830)	PLAA (ENSPCOG00000016632)	IFT74 (ENSPCOG00000023326)	TEK (ENSPCOG00000015584) #22	EQTN (ENSPCOG00000005393) #24	ENSPCOG00000025997	MOB3B (ENSPCOG00000020239) #25	ENSPCOG00000015123 #26	LINGO2 (ENSPCOG00000005529)
Bushbaby	MODERN SPECIES	121	ENSOGAG00000028717	ENSOGAG00000030880	ENSOGAG00000027191	IFNE (ENSOGAG00000013610)	MTAP (ENSOGAG00000007889)	CDKN2A (ENSOGAG00000007892)	CDKN2B (ENSOGAG00000011002)	ENSOGAG00000033113	DMRTA1 (ENSOGAG00000012178)	ELAVL2 (ENSOGAG00000016228)	TUSC1 (ENSOGAG00000031514)	CAAP1 (ENSOGAG00000005033)	PLAA (ENSOGAG00000006317)	LRRC19 (ENSOGAG00000006322)	IFT74 (ENSOGAG00000006320)	TEK (ENSOGAG00000016749) #22	ENSOGAG00000032707	EQTN (ENSOGAG00000016757) #24	MOB3B (ENSOGAG00000029287) #25	IFNK (ENSOGAG00000002205)	C9orf72 (ENSOGAG00000002207) #26	LINGO2 (ENSOGAG00000033126)
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Tree shrew	MODERN SPECIES	1748														PLAA (ENSTBEG00000001459)	IFT74 (ENSTBEG00000003250)	TEK (ENSTBEG00000004627) #22	EQTN (ENSTBEG00000006082) #24	ENSTBEG00000006444 #25
Glires	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.a.a.a.b	ENSGT00940000154359.e	ENSGT00940000167452	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Sciuridae	ANCESTRAL SPECIES	6	ENSGT01000000214430.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078.g	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Marmotini	ANCESTRAL SPECIES	1	ENSGT01000000214430.a.b.f.a.a	ENSGT01000000214430.a.a.a.a.a.b.n.b.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078.g	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00960000189870	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Marmotini_b	ANCESTRAL SPECIES	2			ENSGT01000000214430.a.a.a.a.a.b.n.b.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00960000189870	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Arctic ground squirrel	MODERN SPECIES	53												CAAP1 (ENSUPAG00010008271)	PLAA (ENSUPAG00010008214)	LRRC19 (ENSUPAG00010008202)	IFT74 (ENSUPAG00010008167)	TEK (ENSUPAG00010008055) #22	ENSUPAG00010008024 #24	IFNK (ENSUPAG00010008018)	MOB3B (ENSUPAG00010008004) #25	C9orf72 (ENSUPAG00010007989) #26	LINGO2 (ENSUPAG00010007980)	ENSUPAG00010007972	ENSUPAG00010007954	ACO1 (ENSUPAG00010007907)	RIGI (ENSUPAG00010007863)	TOPORS (ENSUPAG00010007847)	SMIM27 (ENSUPAG00010007842)	NDUFB6 (ENSUPAG00010007836)	TMEM215 (ENSUPAG00010007829)	APTX (ENSUPAG00010007801)	ENSUPAG00010007789
Squirrel	MODERN SPECIES	211										IZUMO3 (ENSSTOG00000021419)	TUSC1 (ENSSTOG00000019804)	CAAP1 (ENSSTOG00000013238)	PLAA (ENSSTOG00000013249)	LRRC19 (ENSSTOG00000013263)	IFT74 (ENSSTOG00000013254)	TEK (ENSSTOG00000010659) #22	ENSSTOG00000021705	MOB3B (ENSSTOG00000024167) #25	C9orf72 (ENSSTOG00000010692) #26	LINGO2 (ENSSTOG00000028554)
Alpin marmot	MODERN SPECIES	30	ENSMMMG00000009657	IFNE (ENSMMMG00000009652)	ENSMMMG00000009642	MTAP (ENSMMMG00000009628)	ENSMMMG00000009612	ENSMMMG00000009596	DMRTA1 (ENSMMMG00000009543)	ENSMMMG00000009529	ELAVL2 (ENSMMMG00000009415)	IZUMO3 (ENSMMMG00000009377)	ENSMMMG00000009342	CAAP1 (ENSMMMG00000009307)	PLAA (ENSMMMG00000009283)	LRRC19 (ENSMMMG00000009258)	IFT74 (ENSMMMG00000009198)	TEK (ENSMMMG00000009044) #22	EQTN (ENSMMMG00000009014) #24	MOB3B (ENSMMMG00000009010) #25	C9orf72 (ENSMMMG00000008985) #26	ENSMMMG00000008980	LINGO2 (ENSMMMG00000008968)	ENSMMMG00000008959	ACO1 (ENSMMMG00000008891)	RIGI (ENSMMMG00000008863)	TOPORS (ENSMMMG00000008850)	SMIM27 (ENSMMMG00000008846)	NDUFB6 (ENSMMMG00000008840)	TMEM215 (ENSMMMG00000008835)	APTX (ENSMMMG00000008805)	DNAJA1 (ENSMMMG00000008778)	SMU1 (ENSMMMG00000008763)
Eurasian red squirrel	MODERN SPECIES	6	ENSSVLG00005023283	ENSSVLG00005023288	ENSSVLG00005023302	CDKN2A (ENSSVLG00005023359)	CDKN2B (ENSSVLG00005023398)	DMRTA1 (ENSSVLG00005023462)	ELAVL2 (ENSSVLG00005023496)	IZUMO3 (ENSSVLG00005023611)	TUSC1 (ENSSVLG00005023687)	ENSSVLG00005023697	ENSSVLG00005023705	ENSSVLG00005023720	PLAA (ENSSVLG00005023742)	IFT74 (ENSSVLG00005023765)	LRRC19 (ENSSVLG00005023797)	TEK (ENSSVLG00005023870) #22	ENSSVLG00005024155	ENSSVLG00005024176	MOB3B (ENSSVLG00005024202) #25	IFNK (ENSSVLG00005024213)	C9orf72 (ENSSVLG00005024231) #26	LINGO2 (ENSSVLG00005024258)	ENSSVLG00005024282	ACO1 (ENSSVLG00005016432)	RIGI (ENSSVLG00005016495)	TOPORS (ENSSVLG00005016651)	SMIM27 (ENSSVLG00005016695)	NDUFB6 (ENSSVLG00005016726)	ENSSVLG00005016810	TMEM215 (ENSSVLG00005016850)	APTX (ENSSVLG00005016894)
Hystricomorpha	ANCESTRAL SPECIES	7			ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT01100000266946	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00940000155007
Naked mole-rat female	MODERN SPECIES	3	CDKN2B (ENSHGLG00000038311)	ENSHGLG00000040016	DMRTA1 (ENSHGLG00000051021)	ELAVL2 (ENSHGLG00000005423)	ENSHGLG00000047261	ENSHGLG00000001616	ENSHGLG00000020416	TUSC1 (ENSHGLG00000039095)	ENSHGLG00000036016	ENSHGLG00000034551	PLAA (ENSHGLG00000010977)	LRRC19 (ENSHGLG00000040675)	ENSHGLG00000032796	IFT74 (ENSHGLG00000007564)	ENSHGLG00000037234	TEK (ENSHGLG00000017418) #22	MOB3B (ENSHGLG00000005405) #25	ENSHGLG00000020201	ENSHGLG00000008527 #26	ENSHGLG00000039277	ENSHGLG00000039388	ENSHGLG00000033674	ENSHGLG00000045962	ENSHGLG00000045175	ENSHGLG00000041601	ENSHGLG00000041367	ENSHGLG00000021227	ENSHGLG00000039697	Aco1 (ENSHGLG00000018922)	RIGI (ENSHGLG00000016504)	TOPORS (ENSHGLG00000006485)
Hystricomorpha_a	ANCESTRAL SPECIES	5			ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Guinea pig	MODERN SPECIES	2	ENSCPOG00000036041	ENSCPOG00000027262	ENSCPOG00000010467	ENSCPOG00000033588	ENSCPOG00000010375	ENSCPOG00000000825	CDKN2A (ENSCPOG00000023988)	CDKN2B (ENSCPOG00000001268)	DMRTA1 (ENSCPOG00000036480)	ELAVL2 (ENSCPOG00000010472)	CAAP1 (ENSCPOG00000037143)	ENSCPOG00000032640	PLAA (ENSCPOG00000012969)	IFT74 (ENSCPOG00000012980)	LRRC19 (ENSCPOG00000012981)	TEK (ENSCPOG00000009907) #22	MOB3B (ENSCPOG00000009470) #25	ENSCPOG00000000866	C9orf72 (ENSCPOG00000009473) #26	LINGO2 (ENSCPOG00000008899)	ENSCPOG00000040788	ENSCPOG00000033096	H2BC18 (ENSCPOG00000030049)	ENSCPOG00000037353	ENSCPOG00000030241	ENSCPOG00000031270	ENSCPOG00000030965	ENSCPOG00000031424	ENSCPOG00000034514	ENSCPOG00000033740	ENSCPOG00000034161
Hystricomorpha_b	ANCESTRAL SPECIES	11						ENSGT01000000214430.a.a.a.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269
Long-tailed chinchilla	MODERN SPECIES	179							MTAP (ENSCLAG00000001731)	CDKN2A (ENSCLAG00000001664)	CDKN2B (ENSCLAG00000004253)	ENSCLAG00000004081	ELAVL2 (ENSCLAG00000003388)	CAAP1 (ENSCLAG00000002895)	PLAA (ENSCLAG00000002600)	LRRC19 (ENSCLAG00000002476)	IFT74 (ENSCLAG00000002217)	TEK (ENSCLAG00000002200) #22	ENSCLAG00000001999 #24	ENSCLAG00000001968 #24	MOB3B (ENSCLAG00000001885) #25	C9orf72 (ENSCLAG00000001862) #26	LINGO2 (ENSCLAG00000017459)	ENSCLAG00000001658	ENSCLAG00000002806	ACO1 (ENSCLAG00000002487)	RIGI (ENSCLAG00000002351)	TOPORS (ENSCLAG00000002292)	SMIM27 (ENSCLAG00000002243)	NDUFB6 (ENSCLAG00000002184)	ENSCLAG00000002091	TMEM215 (ENSCLAG00000013872)	ENSCLAG00000013620
Degu	MODERN SPECIES	140	ENSODEG00000004090	ENSODEG00000004039	ENSODEG00000003787	ENSODEG00000003701	CDKN2B (ENSODEG00000003617)	ENSODEG00000003574	DMRTA1 (ENSODEG00000003392)	ELAVL2 (ENSODEG00000002531)	ENSODEG00000002352	ENSODEG00000002277	ENSODEG00000018769	CAAP1 (ENSODEG00000002253)	PLAA (ENSODEG00000003249)	LRRC19 (ENSODEG00000003217)	IFT74 (ENSODEG00000003146)	TEK (ENSODEG00000002511) #22	MOB3B (ENSODEG00000002400) #25	C9orf72 (ENSODEG00000002381) #26	LINGO2 (ENSODEG00000018786)	ENSODEG00000018803	ENSODEG00000002236
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT01000000214430.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Myomorpha	ANCESTRAL SPECIES	1	ENSGT01000000214430.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.p.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.p.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00900000143271	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b	ENSGT00940000155417.b	ENSGT00950000182879.b.a.b.a.a	ENSGT00940000155417.a.a	ENSGT00950000182879.b.a.a	ENSGT00390000008678	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.o	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00900000143271	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b	ENSGT00940000155417.b	ENSGT00950000182879.b.a.b.a.a	ENSGT00950000182879.b.a.b.a.b	ENSGT00390000008678	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668	ENSGT00940000155136
Cricetinae	ANCESTRAL SPECIES	5		ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.fb	ENSGT00950000182991.B.gb	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00900000143271	ENSGT00940000159251	ENSGT00950000182879.b.a.a	ENSGT00940000155417.b	ENSGT00950000182879.b.a.b.a.a	ENSGT00950000182879.b.a.b.a.b	ENSGT00390000008678	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668	ENSGT00940000155136	ENSGT01050000244818
Chinese hamster chok1gshd	MODERN SPECIES	111	ENSCGRG00001019783	ENSCGRG00001016483	Cdkn2b (ENSCGRG00001014610)	Dmrta1 (ENSCGRG00001014289)	ENSCGRG00001013517	ENSCGRG00001012785	Elavl2 (ENSCGRG00001024409)	Izumo3 (ENSCGRG00001023060)	ENSCGRG00001019319	Tusc1 (ENSCGRG00001012163)	Caap1 (ENSCGRG00001016530)	ENSCGRG00001008077	Plaa (ENSCGRG00001024275)	Lrrc19 (ENSCGRG00001023151)	Ift74 (ENSCGRG00001020714)	Tek (ENSCGRG00001018441) #22	Eqtn (ENSCGRG00001001186) #24	Mysm1 (ENSCGRG00001015762)	Jun (ENSCGRG00001011810)	Fggy (ENSCGRG00001024005)	ENSCGRG00001008656	Hook1 (ENSCGRG00001001100)	ENSCGRG00001005478	ENSCGRG00001020085	Cyp2j6 (ENSCGRG00001017724)	ENSCGRG00001015523	Gm12695 (ENSCGRG00001014021)	Nfia (ENSCGRG00001000754)	Tm2d1 (ENSCGRG00001017276)	ENSCGRG00001014726	Patj (ENSCGRG00001024524)
Golden Hamster	MODERN SPECIES	662	Mllt3 (ENSMAUG00000021318)	Focad (ENSMAUG00000012306)	Hacd4 (ENSMAUG00000000488)	ENSMAUG00000004733	Mtap (ENSMAUG00000010309)	Cdkn2a (ENSMAUG00000003307)	Cdkn2b (ENSMAUG00000019635)	Dmrta1 (ENSMAUG00000004332)	Elavl2 (ENSMAUG00000011955)	Izumo3 (ENSMAUG00000014991)	Tusc1 (ENSMAUG00000020941)	ENSMAUG00000014308	Plaa (ENSMAUG00000013719)	Ift74 (ENSMAUG00000001215)	ENSMAUG00000006577	Tek (ENSMAUG00000018555) #22	Eqtn (ENSMAUG00000015891) #24	Mysm1 (ENSMAUG00000014841)	ENSMAUG00000014400	Jun (ENSMAUG00000007038)	Fggy (ENSMAUG00000019211)	Hook1 (ENSMAUG00000017707)	ENSMAUG00000008711	ENSMAUG00000021213	Cyp2j6 (ENSMAUG00000021242)	ENSMAUG00000003529	Gm12695 (ENSMAUG00000020018)	Nfia (ENSMAUG00000012950)	Tm2d1 (ENSMAUG00000017246)	Patj (ENSMAUG00000021478)	L1td1 (ENSMAUG00000020769)
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.a.a.a.b.o	ENSGT00940000154359.e	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00900000143271	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b	ENSGT00940000155417.b	ENSGT00950000182879.b.a.b.a.a	ENSGT00950000182879.b.a.b.a.b	ENSGT00390000008678	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668	ENSGT00940000155136
Prairie vole	MODERN SPECIES	1	ENSMOCG00000003644	Mtap (ENSMOCG00000012400)	ENSMOCG00000013892	Cdkn2b (ENSMOCG00000015669)	Dmrta1 (ENSMOCG00000002337)	ENSMOCG00000004079	Elavl2 (ENSMOCG00000016960)	ENSMOCG00000018411	Izumo3 (ENSMOCG00000019669)	Tusc1 (ENSMOCG00000019464)	ENSMOCG00000003689	Caap1 (ENSMOCG00000012535)	Plaa (ENSMOCG00000017762)	Ift74 (ENSMOCG00000002321)	Lrrc19 (ENSMOCG00000008422)	Tek (ENSMOCG00000017310) #22	Eqtn (ENSMOCG00000018858) #24	Mysm1 (ENSMOCG00000001327)	Jun (ENSMOCG00000006483)	Fggy (ENSMOCG00000017533)	ENSMOCG00000016214	Hook1 (ENSMOCG00000020291)	ENSMOCG00000017305	ENSMOCG00000000673	ENSMOCG00000007014	ENSMOCG00000022364	Bmp15 (ENSMOCG00000000837)	Shroom4 (ENSMOCG00000014195)	Dgkk (ENSMOCG00000019385)	Ccnb3 (ENSMOCG00000002143)	Akap4 (ENSMOCG00000018265)
Northern American deer mouse	MODERN SPECIES	11	Ifne (ENSPEMG00000029831)	ENSPEMG00000007998	ENSPEMG00000029915	ENSPEMG00000010842	ENSPEMG00000028835	Cdkn2b (ENSPEMG00000025789)	Dmrta1 (ENSPEMG00000008771)	Elavl2 (ENSPEMG00000014101)	ENSPEMG00000013102	ENSPEMG00000031412	Izumo3 (ENSPEMG00000019058)	Caap1 (ENSPEMG00000000545)	Plaa (ENSPEMG00000009992)	Ift74 (ENSPEMG00000017074)	Lrrc19 (ENSPEMG00000017681)	Tek (ENSPEMG00000000588) #22	Eqtn (ENSPEMG00000016567) #24	Mysm1 (ENSPEMG00000011781)	ENSPEMG00000012194	Jun (ENSPEMG00000014041)	Fggy (ENSPEMG00000007085)	ENSPEMG00000026283	Hook1 (ENSPEMG00000003851)	Cyp2j13 (ENSPEMG00000018564)	ENSPEMG00000012209	ENSPEMG00000013709	Cyp2j6 (ENSPEMG00000017727)	Cyp2j9 (ENSPEMG00000000230)	ENSPEMG00000026151	ENSPEMG00000009838	Gm12695 (ENSPEMG00000010497)
Murinae	ANCESTRAL SPECIES	2	ENSGT01000000214430.a.a.a.a.a.b.p.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.p.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00900000143271	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b.c	ENSGT00950000182879.b.a.b.b.d.a	ENSGT00940000155417.a.a	ENSGT00950000182879.b.a.a	ENSGT00390000008678	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668
Mus	ANCESTRAL SPECIES	3	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000168083	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b.c	ENSGT00950000182879.b.a.b.b.d.a	ENSGT00940000155417.a.a	ENSGT00950000182879.b.a.a	ENSGT00390000008678	ENSGT00860000135704	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668
Mus_A	ANCESTRAL SPECIES	3	ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a	ENSGT00860000135766	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000168083	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b.c	ENSGT00950000182879.b.a.b.b.d.a	ENSGT00940000155417.a.a	ENSGT00950000182879.b.a.a	ENSGT00390000008678	ENSGT00860000135704	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a	ENSGT00940000157668
Mus_B	ANCESTRAL SPECIES	5	ENSGT00860000135766	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000168083	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000164376.c	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b.c	ENSGT00950000182879.b.a.b.b.d.a	ENSGT00950000182879.b.a.b.b.d.b.a	ENSGT00950000182879.b.a.b.b.d.b.b	ENSGT00950000182879.b.a.b.a.a	ENSGT00940000155417.a.a	ENSGT00950000182879.b.a.a	ENSGT00390000008678	ENSGT00860000135704
Mouse	MODERN SPECIES	13	Ifna1 (ENSMUSG00000095498)	Ifne (ENSMUSG00000045364)	Mtap (ENSMUSG00000062937)	Cdkn2a (ENSMUSG00000044303)	Cdkn2b (ENSMUSG00000073802)	Dmrta1 (ENSMUSG00000043753)	Zfp352 (ENSMUSG00000070902)	Elavl2 (ENSMUSG00000008489)	Izumo3 (ENSMUSG00000028533)	Gm12666 (ENSMUSG00000066107)	Tusc1 (ENSMUSG00000054000)	Caap1 (ENSMUSG00000028578)	Plaa (ENSMUSG00000028577)	Ift74 (ENSMUSG00000028576)	Lrrc19 (ENSMUSG00000049799)	Tek (ENSMUSG00000006386) #22	Eqtn (ENSMUSG00000028575) #24	Mysm1 (ENSMUSG00000062627)	Jun (ENSMUSG00000052684)	Fggy (ENSMUSG00000028573)	Hook1 (ENSMUSG00000028572)	Cyp2j13 (ENSMUSG00000028571)	Cyp2j12 (ENSMUSG00000081225)	Cyp2j7 (ENSMUSG00000081362)	Cyp2j11 (ENSMUSG00000066097)	Cyp2j8 (ENSMUSG00000082932)	Cyp2j6 (ENSMUSG00000052914)	Cyp2j9 (ENSMUSG00000015224)	Cyp2j5 (ENSMUSG00000052520)	Gm12695 (ENSMUSG00000078639)	E130114P18Rik (ENSMUSG00000048747)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00860000135766	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000168083	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000164376.c	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00860000136187	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000157721	ENSGT00940000162061	ENSGT01000000214434.F	ENSGT00940000159251	ENSGT00940000155417.a.b	ENSGT00950000182879.b.a.b.b.c	ENSGT00950000182879.b.a.b.b.d.a	ENSGT00950000182879.b.a.b.b.d.b.a	ENSGT00950000182879.b.a.b.b.d.b.b	ENSGT00950000182879.b.a.b.a.a	ENSGT00940000155417.a.a	ENSGT00950000182879.b.a.a	ENSGT00390000008678	ENSGT00860000135704
spretus	MODERN SPECIES	13	Ifne (MGP_SPRETEiJ_G0027118)	Mtap (MGP_SPRETEiJ_G0027119)	Cdkn2a (MGP_SPRETEiJ_G0027120)	Cdkn2b (MGP_SPRETEiJ_G0027121)	Dmrta1 (MGP_SPRETEiJ_G0027122)	Zfp352 (MGP_SPRETEiJ_G0027123)	Elavl2 (MGP_SPRETEiJ_G0027124)	Izumo3 (MGP_SPRETEiJ_G0027125)	Tusc1 (MGP_SPRETEiJ_G0027126)	Caap1 (MGP_SPRETEiJ_G0027127)	MGP_SPRETEiJ_G0027128	Plaa (MGP_SPRETEiJ_G0027129)	Ift74 (MGP_SPRETEiJ_G0027130)	Lrrc19 (MGP_SPRETEiJ_G0027131)	MGP_SPRETEiJ_G0027132	Tek (MGP_SPRETEiJ_G0027133) #22	Eqtn (MGP_SPRETEiJ_G0027134) #24	Mysm1 (MGP_SPRETEiJ_G0027135)	Jun (MGP_SPRETEiJ_G0027136)	Fggy (MGP_SPRETEiJ_G0027137)	Hook1 (MGP_SPRETEiJ_G0027138)	Cyp2j13 (MGP_SPRETEiJ_G0027139)	Cyp2j12 (MGP_SPRETEiJ_G0027140)	Cyp2j7 (MGP_SPRETEiJ_G0027141)	Cyp2j11 (MGP_SPRETEiJ_G0027142)	Cyp2j8 (MGP_SPRETEiJ_G0027143)	Cyp2j6 (MGP_SPRETEiJ_G0027144)	Cyp2j9 (MGP_SPRETEiJ_G0027145)	Cyp2j5 (MGP_SPRETEiJ_G0027146)	Gm12695 (MGP_SPRETEiJ_G0027147)	MGP_SPRETEiJ_G0027148
Steppe mouse	MODERN SPECIES	2792															ENSMSIG00000002388	Tek (ENSMSIG00000002054) #22	ENSMSIG00000002020 #24	ENSMSIG00000001999	Mysm1 (ENSMSIG00000001916)	ENSMSIG00000001907	Jun (ENSMSIG00000001898)	ENSMSIG00000001273	ENSMSIG00000001210	Cyp2j13 (ENSMSIG00000001083)
Ryukyu mouse	MODERN SPECIES	13	MGP_CAROLIEiJ_G0026152	MGP_CAROLIEiJ_G0026153	Ifne (MGP_CAROLIEiJ_G0026154)	Mtap (MGP_CAROLIEiJ_G0026155)	Cdkn2a (MGP_CAROLIEiJ_G0026156)	Cdkn2b (MGP_CAROLIEiJ_G0026157)	Dmrta1 (MGP_CAROLIEiJ_G0026158)	Elavl2 (MGP_CAROLIEiJ_G0026159)	Izumo3 (MGP_CAROLIEiJ_G0026160)	Tusc1 (MGP_CAROLIEiJ_G0026161)	Caap1 (MGP_CAROLIEiJ_G0026162)	MGP_CAROLIEiJ_G0026163	Plaa (MGP_CAROLIEiJ_G0026164)	MGP_CAROLIEiJ_G0026165	Lrrc19 (MGP_CAROLIEiJ_G0026166)	Tek (MGP_CAROLIEiJ_G0026167) #22	Eqtn (MGP_CAROLIEiJ_G0026168) #24	Mysm1 (MGP_CAROLIEiJ_G0026169)	Jun (MGP_CAROLIEiJ_G0026170)	Fggy (MGP_CAROLIEiJ_G0026171)	Hook1 (MGP_CAROLIEiJ_G0026172)	Cyp2j13 (MGP_CAROLIEiJ_G0026173)	Cyp2j12 (MGP_CAROLIEiJ_G0026174)	Cyp2j7 (MGP_CAROLIEiJ_G0026175)	MGP_CAROLIEiJ_G0026176	Cyp2j9 (MGP_CAROLIEiJ_G0026177)	Cyp2j5 (MGP_CAROLIEiJ_G0026178)	Gm12695 (MGP_CAROLIEiJ_G0026179)	MGP_CAROLIEiJ_G0026180	MGP_CAROLIEiJ_G0026181	Nfia (MGP_CAROLIEiJ_G0026182)
Shrew mouse	MODERN SPECIES	19	MGP_PahariEiJ_G0028488	MGP_PahariEiJ_G0028490	Ifne (MGP_PahariEiJ_G0028491)	Mtap (MGP_PahariEiJ_G0028492)	Cdkn2a (MGP_PahariEiJ_G0028493)	Cdkn2b (MGP_PahariEiJ_G0028494)	Dmrta1 (MGP_PahariEiJ_G0028495)	Elavl2 (MGP_PahariEiJ_G0028496)	Izumo3 (MGP_PahariEiJ_G0028497)	Tusc1 (MGP_PahariEiJ_G0028498)	Caap1 (MGP_PahariEiJ_G0028499)	MGP_PahariEiJ_G0028500	Plaa (MGP_PahariEiJ_G0028501)	Ift74 (MGP_PahariEiJ_G0028502)	Lrrc19 (MGP_PahariEiJ_G0028503)	Tek (MGP_PahariEiJ_G0028504) #22	MGP_PahariEiJ_G0028505 #24	Mysm1 (MGP_PahariEiJ_G0028506)	Jun (MGP_PahariEiJ_G0028507)	Fggy (MGP_PahariEiJ_G0028508)	Hook1 (MGP_PahariEiJ_G0028509)	Cyp2j13 (MGP_PahariEiJ_G0028510)	Cyp2j12 (MGP_PahariEiJ_G0028511)	Cyp2j7 (MGP_PahariEiJ_G0028512)	Cyp2j6 (MGP_PahariEiJ_G0028513)	Cyp2j9 (MGP_PahariEiJ_G0028514)	Cyp2j5 (MGP_PahariEiJ_G0028515)	Gm12695 (MGP_PahariEiJ_G0028516)	MGP_PahariEiJ_G0028517	MGP_PahariEiJ_G0028518	Nfia (MGP_PahariEiJ_G0028519)
Rat	MODERN SPECIES	15	ENSRNOG00000070364	Cdkn2a (ENSRNOG00000059837)	Cdkn2b (ENSRNOG00000006735)	Dmrta1 (ENSRNOG00000024093)	Zfp352 (ENSRNOG00000033600)	Zfp353 (ENSRNOG00000050804)	Elavl2 (ENSRNOG00000006853)	Izumo3 (ENSRNOG00000022488)	AABR07049223.1 (ENSRNOG00000032516)	AABR07049228.1 (ENSRNOG00000056007)	Tusc1 (ENSRNOG00000066328)	Caap1 (ENSRNOG00000007299)	Plaa (ENSRNOG00000007753)	Ift74 (ENSRNOG00000008075)	Lrrc19 (ENSRNOG00000022225)	Tek (ENSRNOG00000008587) #22	Eqtn (ENSRNOG00000026323) #24	Mysm1 (ENSRNOG00000026299)	Jun (ENSRNOG00000026293)	Fggy (ENSRNOG00000008907)	AABR07049299.1 (ENSRNOG00000026234)	Hook1 (ENSRNOG00000026226)	ENSRNOG00000070878	Cyp2j10 (ENSRNOG00000042224)	Cyp2j16 (ENSRNOG00000030466)	Cyp2j3 (ENSRNOG00000031004)	C5h1orf87 (ENSRNOG00000026169)	ENSRNOG00000065127	Nfia (ENSRNOG00000006966)	AABR07049329.1 (ENSRNOG00000030107)	Tm2d1 (ENSRNOG00000007527)
Upper Galilee mountains blind mole rat	MODERN SPECIES	628	Klhl9 (ENSNGAG00000012889)	ENSNGAG00000015985	ENSNGAG00000022636	Cdkn2b (ENSNGAG00000012585)	Dmrta1 (ENSNGAG00000023922)	ENSNGAG00000021866	Elavl2 (ENSNGAG00000014535)	ENSNGAG00000022004	Izumo3 (ENSNGAG00000013642)	Tusc1 (ENSNGAG00000001051)	Caap1 (ENSNGAG00000022127)	ENSNGAG00000021141	Plaa (ENSNGAG00000022466)	Ift74 (ENSNGAG00000005078)	Lrrc19 (ENSNGAG00000004826)	Tek (ENSNGAG00000019538) #22	Eqtn (ENSNGAG00000023403) #24	Mob3b (ENSNGAG00000023396) #25	C9orf72 (ENSNGAG00000023767) #26
Lesser Egyptian jerboa	MODERN SPECIES	66	ENSJJAG00000010173	ENSJJAG00000017320	Cdkn2b (ENSJJAG00000021247)	ENSJJAG00000009128	ENSJJAG00000009725	Dmrta1 (ENSJJAG00000015837)	ENSJJAG00000021773	Elavl2 (ENSJJAG00000008247)	Izumo3 (ENSJJAG00000017341)	ENSJJAG00000011332	ENSJJAG00000019508	Caap1 (ENSJJAG00000012208)	Plaa (ENSJJAG00000013453)	Lrrc19 (ENSJJAG00000022557)	Ift74 (ENSJJAG00000017963)	Tek (ENSJJAG00000019197) #22	ENSJJAG00000020051	Mob3b (ENSJJAG00000000886) #25	C9orf72 (ENSJJAG00000008608) #26	Lingo2 (ENSJJAG00000010453)	ENSJJAG00000022023	ENSJJAG00000008353	Aco1 (ENSJJAG00000013824)	Rigi (ENSJJAG00000004582)	Topors (ENSJJAG00000021171)	Smim27 (ENSJJAG00000013866)	ENSJJAG00000022419	Tmem215 (ENSJJAG00000007413)	Aptx (ENSJJAG00000015653)	Dnaja1 (ENSJJAG00000019996)	Smu1 (ENSJJAG00000017533)
Kangaroo rat	MODERN SPECIES	372	Focad (ENSDORG00000006921)	Hacd4 (ENSDORG00000006925)	Klhl9 (ENSDORG00000028408)	Mtap (ENSDORG00000012074)	ENSDORG00000012075	Cdkn2b (ENSDORG00000012076)	Dmrta1 (ENSDORG00000015411)	Elavl2 (ENSDORG00000010437)	Izumo3 (ENSDORG00000027519)	ENSDORG00000005292	Tusc1 (ENSDORG00000029686)	Caap1 (ENSDORG00000025530)	Plaa (ENSDORG00000002789)	Ift74 (ENSDORG00000008963)	Lrrc19 (ENSDORG00000008965)	Tek (ENSDORG00000010652) #22	ENSDORG00000010654 #24	Mob3b (ENSDORG00000010444) #25	C9orf72 (ENSDORG00000006734) #26	Lingo2 (ENSDORG00000029438)
Lagomorpha	ANCESTRAL SPECIES	23					ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Rabbit	MODERN SPECIES		ENSOCUG00000021134	DMRTA1 (ENSOCUG00000006069)	ELAVL2 (ENSOCUG00000005891)	ENSOCUG00000030421	IZUMO3 (ENSOCUG00000022724)	TUSC1 (ENSOCUG00000017580)	ENSOCUG00000015387	ENSOCUG00000027058	ENSOCUG00000033820	ENSOCUG00000003706	ENSOCUG00000023508	CAAP1 (ENSOCUG00000015461)	PLAA (ENSOCUG00000015471)	LRRC19 (ENSOCUG00000029228)	IFT74 (ENSOCUG00000001320)	TEK (ENSOCUG00000017666) #22	ENSOCUG00000036968	ENSOCUG00000021090	IFNK (ENSOCUG00000002019)	ENSOCUG00000017681 #24	C9orf72 (ENSOCUG00000006510) #26	LINGO2 (ENSOCUG00000011540)	ENSOCUG00000034768	ENSOCUG00000035009	ENSOCUG00000024611	ACO1 (ENSOCUG00000015960)	RIGI (ENSOCUG00000004710)	TOPORS (ENSOCUG00000005077)	SMIM27 (ENSOCUG00000031843)	NDUFB6 (ENSOCUG00000005089)	TMEM215 (ENSOCUG00000008320)
Pika	MODERN SPECIES	613																ENSOPRG00000007159 #22	ENSOPRG00000007193 #24	ENSOPRG00000007206 #25
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a	ENSGT00940000153558.b.i.a
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000167452	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a	ENSGT00940000155007
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT01000000214430.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT01100000266946	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a	ENSGT00940000155007
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a	ENSGT00940000155007	ENSGT00940000155244
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.h	ENSGT00940000155007
Cetacea	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.b.z	ENSGT01000000214430.a.a.a.a.a.a.b.m	ENSGT01000000214430.a.a.b	ENSGT00940000163158.b.b.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000154788.ib.b.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.h
Odontoceti	ANCESTRAL SPECIES	8	ENSGT01000000214430.a.a.a.a.a.b.z	ENSGT01000000214430.a.a.a.a.a.a.b.m.a	ENSGT01000000214430.a.a.b	ENSGT00940000163158.b.b.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000154788.ib.b.b.a	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.h
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b.m.a	ENSGT01000000214430.a.a.b	ENSGT00940000163158.b.b.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000154788.ib.b.b.a	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.g.b
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT01000000214430.a.a.a.a.a.a.b.m.a	ENSGT01000000214430.a.a.b	ENSGT00940000163158.b.b.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00390000007370.j	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00950000184123	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000154788.ib.b.b.a	ENSGT00940000154369.c.a	ENSGT00940000157772	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535.b.a	ENSGT00390000006684	ENSGT00940000156806
Monodontidae	ANCESTRAL SPECIES	5	ENSGT01000000214430.a.a.a.a.a.a.b.m.a	ENSGT01000000214430.a.a.b	ENSGT00940000163158.b.b.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00390000007370.j	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000154788.ib.b.b.a	ENSGT00940000157772	ENSGT00530000064170.e	ENSGT00390000007535.b.a	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.b.a.a.h	ENSGT00940000155007	ENSGT00940000155244	ENSGT00450000040296
Beluga whale	MODERN SPECIES	50	ENSDLEG00000020715	MTAP (ENSDLEG00000020720)	CDKN2A (ENSDLEG00000020727)	ENSDLEG00000020728	DMRTA1 (ENSDLEG00000020730)	ENSDLEG00000020732	ELAVL2 (ENSDLEG00000020736)	IZUMO3 (ENSDLEG00000020742)	ENSDLEG00000020744	TUSC1 (ENSDLEG00000020748)	ENSDLEG00000020753	CAAP1 (ENSDLEG00000020758)	PLAA (ENSDLEG00000020764)	IFT74 (ENSDLEG00000020767)	LRRC19 (ENSDLEG00000020775)	TEK (ENSDLEG00000020783) #22	MOB3B (ENSDLEG00000020809) #25	IFNK (ENSDLEG00000020813)	CUNH9orf72 (ENSDLEG00000020817) #26	LINGO2 (ENSDLEG00000020824)	ENSDLEG00000020832	ENSDLEG00000020841	ACO1 (ENSDLEG00000020847)	TOPORS (ENSDLEG00000020871)	NDUFB6 (ENSDLEG00000020877)	TMEM215 (ENSDLEG00000020888)	APTX (ENSDLEG00000020896)	DNAJA1 (ENSDLEG00000020908)	SMU1 (ENSDLEG00000020915)	B4GALT1 (ENSDLEG00000020924)	BAG1 (ENSDLEG00000020931)
Narwhal	MODERN SPECIES	312	ENSMMNG00015015900	MTAP (ENSMMNG00015015858)	CDKN2A (ENSMMNG00015015826)	CDKN2B (ENSMMNG00015015802)	ENSMMNG00015015785	DMRTA1 (ENSMMNG00015015759)	ENSMMNG00015020828	ELAVL2 (ENSMMNG00015020789)	IZUMO3 (ENSMMNG00015020736)	ENSMMNG00015020712	TUSC1 (ENSMMNG00015020705)	CAAP1 (ENSMMNG00015020689)	PLAA (ENSMMNG00015020666)	LRRC19 (ENSMMNG00015020655)	IFT74 (ENSMMNG00015020629)	TEK (ENSMMNG00015020478) #22	EQTN (ENSMMNG00015020384) #24	IFNK (ENSMMNG00015020369)	MOB3B (ENSMMNG00015020353) #25	C9orf72 (ENSMMNG00015020313) #26	LINGO2 (ENSMMNG00015020298)	ENSMMNG00015020280	ENSMMNG00015020250	ACO1 (ENSMMNG00015020219)	TOPORS (ENSMMNG00015020111)	SMIM27 (ENSMMNG00015020089)	ENSMMNG00015020067	ENSMMNG00015020043	TMEM215 (ENSMMNG00015020032)	APTX (ENSMMNG00015019891)	ENSMMNG00015019827
Vaquita	MODERN SPECIES	17	ENSPSNG00000001246	MTAP (ENSPSNG00000001269)	CDKN2A (ENSPSNG00000001297)	CDKN2B (ENSPSNG00000001319)	ENSPSNG00000001333	DMRTA1 (ENSPSNG00000001426)	ENSPSNG00000001438	ELAVL2 (ENSPSNG00000001471)	IZUMO3 (ENSPSNG00000001537)	ENSPSNG00000001579	TUSC1 (ENSPSNG00000001586)	CAAP1 (ENSPSNG00000001609)	PLAA (ENSPSNG00000001649)	IFT74 (ENSPSNG00000001698)	LRRC19 (ENSPSNG00000001725)	TEK (ENSPSNG00000001842) #22	ENSPSNG00000001974	MOB3B (ENSPSNG00000001987) #25	IFNK (ENSPSNG00000002003)	C9orf72 (ENSPSNG00000002018) #26	LINGO2 (ENSPSNG00000002038)	ENSPSNG00000002047	ENSPSNG00000002077	ENSPSNG00000002105	ACO1 (ENSPSNG00000002130)	ENSPSNG00000002178	TOPORS (ENSPSNG00000002196)	SMIM27 (ENSPSNG00000002212)	ENSPSNG00000002234	TMEM215 (ENSPSNG00000002251)	APTX (ENSPSNG00000002301)
Dolphin	MODERN SPECIES	45												CAAP1 (ENSTTRG00000005341)	PLAA (ENSTTRG00000005355)	IFT74 (ENSTTRG00000005389)	LRRC19 (ENSTTRG00000005431)	TEK (ENSTTRG00000005441) #22	EQTN (ENSTTRG00000005469) #24	MOB3B (ENSTTRG00000005481) #25	IFNK (ENSTTRG00000005482)	CUNH9orf72 (ENSTTRG00000005486) #26
Sperm whale	MODERN SPECIES	20	ENSPCTG00005016562	ENSPCTG00005016584	IFNE (ENSPCTG00005016639)	ENSPCTG00005016658	MTAP (ENSPCTG00005016695)	CDKN2A (ENSPCTG00005016737)	CDKN2B (ENSPCTG00005016790)	DMRTA1 (ENSPCTG00005016828)	ELAVL2 (ENSPCTG00005016896)	IZUMO3 (ENSPCTG00005017059)	TUSC1 (ENSPCTG00005017226)	CAAP1 (ENSPCTG00005017264)	PLAA (ENSPCTG00005017333)	IFT74 (ENSPCTG00005017400)	LRRC19 (ENSPCTG00005017494)	TEK (ENSPCTG00005017578) #22	ENSPCTG00005018255	MOB3B (ENSPCTG00005018315) #25	IFNK (ENSPCTG00005018354)	C9orf72 (ENSPCTG00005018375) #26	LINGO2 (ENSPCTG00005018442)	ENSPCTG00005018459	ENSPCTG00005000498	ENSPCTG00005000528	ENSPCTG00005000545	ACO1 (ENSPCTG00005000670)	TOPORS (ENSPCTG00005001378)	SMIM27 (ENSPCTG00005001396)	NDUFB6 (ENSPCTG00005001416)	TMEM215 (ENSPCTG00005001431)	APTX (ENSPCTG00005001493)
Blue whale	MODERN SPECIES	17	ENSBMSG00010002667	IFNE (ENSBMSG00010002658)	ENSBMSG00010002649	MTAP (ENSBMSG00010002632)	CDKN2A (ENSBMSG00010002601)	DMRTA1 (ENSBMSG00010002547)	ENSBMSG00010002538	ELAVL2 (ENSBMSG00010002512)	ENSBMSG00010002482	IZUMO3 (ENSBMSG00010002457)	TUSC1 (ENSBMSG00010002418)	CAAP1 (ENSBMSG00010002383)	PLAA (ENSBMSG00010002358)	LRRC19 (ENSBMSG00010002326)	IFT74 (ENSBMSG00010002307)	TEK (ENSBMSG00010002226) #22	ENSBMSG00010002164	MOB3B (ENSBMSG00010002146) #25	IFNK (ENSBMSG00010002135)	C9orf72 (ENSBMSG00010002120) #26	LINGO2 (ENSBMSG00010002102)	ENSBMSG00010002080	ENSBMSG00010002070	ACO1 (ENSBMSG00010002056)	RIGI (ENSBMSG00010002006)	TOPORS (ENSBMSG00010001968)	SMIM27 (ENSBMSG00010001953)	NDUFB6 (ENSBMSG00010001941)	TMEM215 (ENSBMSG00010001931)	APTX (ENSBMSG00010001870)	ENSBMSG00010001830
Pecora	ANCESTRAL SPECIES	30	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684
Percora_a	ANCESTRAL SPECIES	24	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT01100000266201	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684
Bovidae	ANCESTRAL SPECIES	14	ENSGT01100000263642	ENSGT01000000214430.a.a.a.b.a	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a	ENSGT01000000214430.a.a.a.a.a.b	ENSGT00940000154359.e	ENSGT00940000165099	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT01100000266201	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684	ENSGT00530000063668.B.a	ENSGT00940000158238
Caprinae	ANCESTRAL SPECIES	43	ENSGT01000000214430.a.a.a.a.a.b.bb.b.a.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT01100000266201	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01000000214430.b	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00530000063668.B.a	ENSGT00940000158238	ENSGT00390000004380	ENSGT00940000158598	ENSGT00720000108839.l.a
Goat	MODERN SPECIES	27	ENSCHIG00000018121	CDKN2A (ENSCHIG00000025939)	CDKN2B (ENSCHIG00000025845)	DMRTA1 (ENSCHIG00000023134)	ENSCHIG00000018988	ELAVL2 (ENSCHIG00000025894)	ENSCHIG00000006162	IZUMO3 (ENSCHIG00000018315)	ENSCHIG00000003269	TUSC1 (ENSCHIG00000012670)	ENSCHIG00000026276	CAAP1 (ENSCHIG00000017091)	PLAA (ENSCHIG00000014920)	LRRC19 (ENSCHIG00000024759)	IFT74 (ENSCHIG00000009508)	TEK (ENSCHIG00000013962) #22	EQTN (ENSCHIG00000008768) #24	IFNK (ENSCHIG00000016395)	MOB3B (ENSCHIG00000011582) #25	C9orf72 (ENSCHIG00000014755) #26	LINGO2 (ENSCHIG00000013346)	ENSCHIG00000006618	ENSCHIG00000024316	ENSCHIG00000020484	ACO1 (ENSCHIG00000007667)	RIGI (ENSCHIG00000025883)	TOPORS (ENSCHIG00000012805)	NDUFB6 (ENSCHIG00000027260)	TMEM215 (ENSCHIG00000008408)	ENSCHIG00000010216	SCARA3 (ENSCHIG00000025164)
Rambouillet Sheep	MODERN SPECIES	11	TP-1P8 (ENSOARG00020007442)	ENSOARG00020007481	IFNE (ENSOARG00020007524)	ENSOARG00020007545	CDKN2A (ENSOARG00020007568)	CDKN2B (ENSOARG00020007616)	DMRTA1 (ENSOARG00020007643)	ELAVL2 (ENSOARG00020007662)	ENSOARG00020007723	IZUMO3 (ENSOARG00020007782)	TUSC1 (ENSOARG00020007925)	PLAA (ENSOARG00020008093)	IFT74 (ENSOARG00020008192)	LRRC19 (ENSOARG00020008306)	ENSOARG00020008357	TEK (ENSOARG00020008433) #22	MOB3B (ENSOARG00020008934) #25	ENSOARG00020008983	IFNK (ENSOARG00020009030)	C9orf72 (ENSOARG00020009060) #26	LINGO2 (ENSOARG00020009133)	ENSOARG00020009145	ENSOARG00020009228	ENSOARG00020009264	ACO1 (ENSOARG00020009310)	RIGI (ENSOARG00020009445)	ENSOARG00020009633	NDUFB6 (ENSOARG00020009670)	TMEM215 (ENSOARG00020009741)	ENSOARG00020009753	SCARA3 (ENSOARG00020009895)
Bovinae	ANCESTRAL SPECIES	39	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.b	ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000158555.i.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684	ENSGT00390000005140.b.b.d	ENSGT00390000013989.a.ab
Bos	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.y	ENSGT00940000165099	ENSGT00390000007552.f	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00550000074873.bb.b	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000158555.i.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684	ENSGT00390000013989.a.ab.c.a	ENSGT00530000063668.B.a
Bos_a	ANCESTRAL SPECIES	50	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.y	ENSGT00940000162423	ENSGT00940000154902.bb.a	ENSGT00940000154902.bb.b	ENSGT00390000007552.f	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00550000074873.bb.b	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00730000110997.l	ENSGT00940000158555.i.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684	ENSGT00390000013989.a.ab.c.a
Domestic yak	MODERN SPECIES	26	ENSBGRG00000002476	ENSBGRG00000002505	IFNE (ENSBGRG00000002520)	ENSBGRG00000002533	ENSBGRG00000002560	ENSBGRG00000002626	DMRTA1 (ENSBGRG00000002642)	ELAVL2 (ENSBGRG00000002663)	IZUMO3 (ENSBGRG00000002804)	TUSC1 (ENSBGRG00000002852)	ENSBGRG00000000412	CAAP1 (ENSBGRG00000000429)	PLAA (ENSBGRG00000000455)	IFT74 (ENSBGRG00000000512)	LRRC19 (ENSBGRG00000000556)	TEK (ENSBGRG00000000666) #22	ENSBGRG00000001020	MOB3B (ENSBGRG00000001067) #25	ENSBGRG00000001104	C9orf72 (ENSBGRG00000001111) #26	ENSBGRG00000001152	LINGO2 (ENSBGRG00000001159)	ENSBGRG00000001171	ENSBGRG00000001183	ENSBGRG00000001204	ENSBGRG00000001232	ACO1 (ENSBGRG00000001264)	RIGI (ENSBGRG00000001303)	ENSBGRG00000001348	TOPORS (ENSBGRG00000001367)	ENSBGRG00000001384
Wild yak	MODERN SPECIES	1708											ENSBMUG00000022147	CAAP1 (ENSBMUG00000022133)	PLAA (ENSBMUG00000022114)	LRRC19 (ENSBMUG00000022097)	IFT74 (ENSBMUG00000022064)	TEK (ENSBMUG00000022005) #22
Bos_b	ANCESTRAL SPECIES	3	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.z	ENSGT00940000163078	ENSGT00940000162423	ENSGT00390000007552.f	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT01100000263474.a.b.b.f.g.a.a.a	ENSGT00550000074873.bb.b	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00950000184123	ENSGT01000000214430.b	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00950000185419	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01100000264077	ENSGT00390000007535	ENSGT00390000006684	ENSGT00390000013989.a.ab.c.a	ENSGT00530000063668.B.a	ENSGT00940000158238
Cow	MODERN SPECIES	27	IFNT3 (ENSBTAG00000050661)	IFNE (ENSBTAG00000039069)	ENSBTAG00000025929	CDKN2A (ENSBTAG00000034220)	CDKN2B (ENSBTAG00000051567)	DMRTA1 (ENSBTAG00000001315)	ELAVL2 (ENSBTAG00000046348)	IZUMO3 (ENSBTAG00000023412)	TUSC1 (ENSBTAG00000008551)	ENSBTAG00000052519	ATP6V0C (ENSBTAG00000026428)	CAAP1 (ENSBTAG00000001223)	PLAA (ENSBTAG00000013011)	LRRC19 (ENSBTAG00000043983)	IFT74 (ENSBTAG00000019568)	TEK (ENSBTAG00000020148) #22	EQTN (ENSBTAG00000034391)	IFNK (ENSBTAG00000006853)	MOB3B (ENSBTAG00000000804) #25	C9orf72 (ENSBTAG00000010059) #26	LINGO2 (ENSBTAG00000016070)	ENSBTAG00000050975	ENSBTAG00000018340	ENSBTAG00000052065	ACO1 (ENSBTAG00000000555)	RIGI (ENSBTAG00000003366)	TOPORS (ENSBTAG00000005905)	NDUFB6 (ENSBTAG00000005907)	TMEM215 (ENSBTAG00000013974)	ENSBTAG00000034560	CLU (ENSBTAG00000005574)
Hybrid Bos Indicus	MODERN SPECIES	27	MTAP (ENSBIXG00005004427)	CDKN2A (ENSBIXG00005026038)	CDKN2B (ENSBIXG00005004453)	ENSBIXG00005007636	DMRTA1 (ENSBIXG00005026148)	ELAVL2 (ENSBIXG00005026326)	IZUMO3 (ENSBIXG00005026432)	TUSC1 (ENSBIXG00005004523)	ENSBIXG00005026478	ENSBIXG00005004531	CAAP1 (ENSBIXG00005026525)	ENSBIXG00005026532	PLAA (ENSBIXG00005026552)	LRRC19 (ENSBIXG00005026561)	IFT74 (ENSBIXG00005004546)	TEK (ENSBIXG00005026764) #22	ENSBIXG00005002481	IFNK (ENSBIXG00005004601)	C9orf72 (ENSBIXG00005026955) #26	LINGO2 (ENSBIXG00005026982)	ENSBIXG00005027001	ENSBIXG00005027020	ENSBIXG00005004636	ACO1 (ENSBIXG00005027147)	RIGI (ENSBIXG00005004673)	TOPORS (ENSBIXG00005027224)	ENSBIXG00005027238	NDUFB6 (ENSBIXG00005027286)	TMEM215 (ENSBIXG00005027309)	ENSBIXG00005027363	SCARA3 (ENSBIXG00005027449)
American bison	MODERN SPECIES	3240	IFNE (ENSBBBG00000018139)	MTAP (ENSBBBG00000018131)	CDKN2A (ENSBBBG00000007436)	ENSBBBG00000018093	ENSBBBG00000018086	ENSBBBG00000004445	DMRTA1 (ENSBBBG00000018078)	ELAVL2 (ENSBBBG00000018068)	IZUMO3 (ENSBBBG00000018026)	TUSC1 (ENSBBBG00000008010)	ENSBBBG00000004430	CAAP1 (ENSBBBG00000017988)	PLAA (ENSBBBG00000017959)	IFT74 (ENSBBBG00000017924)	LRRC19 (ENSBBBG00000017856)	TEK (ENSBBBG00000008384) #22	MOB3B (ENSBBBG00000017671) #25	IFNK (ENSBBBG00000017664)	C9orf72 (ENSBBBG00000017654) #26	LINGO2 (ENSBBBG00000017617)	ENSBBBG00000017613	ENSBBBG00000017610	ENSBBBG00000006778
Siberian musk deer	MODERN SPECIES	108	ENSMMSG00000000787	ENSMMSG00000000778	ENSMMSG00000000758	CDKN2A (ENSMMSG00000000727)	DMRTA1 (ENSMMSG00000000694)	ENSMMSG00000000683	ELAVL2 (ENSMMSG00000000635)	ENSMMSG00000000596	IZUMO3 (ENSMMSG00000000550)	TUSC1 (ENSMMSG00000000526)	ENSMMSG00000000515	CAAP1 (ENSMMSG00000000493)	PLAA (ENSMMSG00000000462)	LRRC19 (ENSMMSG00000000437)	IFT74 (ENSMMSG00000000361)	TEK (ENSMMSG00000000195) #22	ENSMMSG00000000118	ENSMMSG00000000106	MOB3B (ENSMMSG00000000088) #25	C9orf72 (ENSMMSG00000000067) #26	ENSMMSG00000000050	LINGO2 (ENSMMSG00000000040)	ENSMMSG00000000028	ENSMMSG00000000015	ENSMMSG00000019650	ACO1 (ENSMMSG00000019601)	RIGI (ENSMMSG00000019559)	TOPORS (ENSMMSG00000019541)	ENSMMSG00000019527	NDUFB6 (ENSMMSG00000019514)	ENSMMSG00000019494
Yarkand deer	MODERN SPECIES	21	ENSCHYG00000023395	ENSCHYG00000023368	ENSCHYG00000023337	DMRTA1 (ENSCHYG00000023312)	ELAVL2 (ENSCHYG00000023207)	ENSCHYG00000023179	ENSCHYG00000023157	IZUMO3 (ENSCHYG00000023052)	ENSCHYG00000023030	TUSC1 (ENSCHYG00000023011)	ENSCHYG00000022983	CAAP1 (ENSCHYG00000022921)	PLAA (ENSCHYG00000022781)	LRRC19 (ENSCHYG00000022730)	IFT74 (ENSCHYG00000022499)	TEK (ENSCHYG00000021500) #22	ENSCHYG00000021324	C9orf72 (ENSCHYG00000021206) #26	LINGO2 (ENSCHYG00000021182)	ENSCHYG00000021138	ENSCHYG00000021084	ENSCHYG00000020942	ENSCHYG00000020855	ACO1 (ENSCHYG00000019470)	TOPORS (ENSCHYG00000019297)	ENSCHYG00000019247	NDUFB6 (ENSCHYG00000019107)	TMEM215 (ENSCHYG00000019068)	ENSCHYG00000019042	ENSCHYG00000018750	SCARA3 (ENSCHYG00000018537)
Camelidae	ANCESTRAL SPECIES	104		ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665
Arabian camel	MODERN SPECIES	30	ENSCDRG00005001595	ENSCDRG00005001609	IFNE (ENSCDRG00005001617)	ENSCDRG00005001627	ENSCDRG00005001648	CDKN2B (ENSCDRG00005001668)	DMRTA1 (ENSCDRG00005001683)	ENSCDRG00005001690	ELAVL2 (ENSCDRG00005001709)	IZUMO3 (ENSCDRG00005001756)	ENSCDRG00005001804 #16	CAAP1 (ENSCDRG00005001831)	PLAA (ENSCDRG00005001853)	IFT74 (ENSCDRG00005001917)	LRRC19 (ENSCDRG00005001952)	TEK (ENSCDRG00005001992) #22	ENSCDRG00005002128 #24	MOB3B (ENSCDRG00005002177) #25	IFNK (ENSCDRG00005002184)	C9orf72 (ENSCDRG00005002198) #26	LINGO2 (ENSCDRG00005002218)	ENSCDRG00005002221
Alpaca	MODERN SPECIES	2708											TUSC1 (ENSVPAG00000007943)	CAAP1 (ENSVPAG00000007945)	PLAA (ENSVPAG00000007946)	IFT74 (ENSVPAG00000007947)	LRRC19 (ENSVPAG00000007948)	TEK (ENSVPAG00000007949) #22	EQTN (ENSVPAG00000007954) #24
Suina	ANCESTRAL SPECIES	30				ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00950000184123	ENSGT00950000183043.a.b.b.a.a.a.a.b	ENSGT00940000156540	ENSGT00940000159098	ENSGT00730000111179.b	ENSGT01030000234620.a.b.a	ENSGT00390000006996	ENSGT00940000158836	ENSGT00940000154656	ENSGT00940000156116.C	ENSGT00940000160936	ENSGT00940000155645	ENSGT00390000015400	ENSGT00390000016068
Pig	MODERN SPECIES		ENSSSCG00000031529	IFNE (ENSSSCG00000005136)	MTAP (ENSSSCG00000005135)	CDKN2A (ENSSSCG00000005134)	CDKN2B (ENSSSCG00000034120)	DMRTA1 (ENSSSCG00000005131)	ENSSSCG00000052428	ELAVL2 (ENSSSCG00000005130)	IZUMO3 (ENSSSCG00000005129)	TUSC1 (ENSSSCG00000005128)	CAAP1 (ENSSSCG00000053029)	PLAA (ENSSSCG00000005126)	ENSSSCG00000045059	LRRC19 (ENSSSCG00000005125)	IFT74 (ENSSSCG00000005124)	TEK (ENSSSCG00000005122) #22	ENSSSCG00000057365	ENSSSCG00000056640	ENSSSCG00000005121	ENSSSCG00000044869	ENSSSCG00000060741	ENSSSCG00000061929	KCNH5 (ENSSSCG00000034726)	RHOJ (ENSSSCG00000022804)	GPHB5 (ENSSSCG00000005116)	PPP2R5E (ENSSSCG00000026382)	WDR89 (ENSSSCG00000005112)	SGPP1 (ENSSSCG00000028558)	SYNE2 (ENSSSCG00000005110)	ESR2 (ENSSSCG00000005109)	ENSSSCG00000051349
Chacoan peccary	MODERN SPECIES	784	ENSCWAG00000013402	ENSCWAG00000013446	IFNE (ENSCWAG00000013463)	MTAP (ENSCWAG00000013498)	CDKN2A (ENSCWAG00000013543)	CDKN2B (ENSCWAG00000013670)	DMRTA1 (ENSCWAG00000013683)	ELAVL2 (ENSCWAG00000013733)	ENSCWAG00000013912	IZUMO3 (ENSCWAG00000013956)	TUSC1 (ENSCWAG00000014088)	CAAP1 (ENSCWAG00000014114)	PLAA (ENSCWAG00000014162)	IFT74 (ENSCWAG00000014238)	LRRC19 (ENSCWAG00000014294)	TEK (ENSCWAG00000014388) #22	ENSCWAG00000015034	ENSCWAG00000015083	KCNH5 (ENSCWAG00000015153)	RHOJ (ENSCWAG00000015319)	GPHB5 (ENSCWAG00000015356)	PPP2R5E (ENSCWAG00000015392)	WDR89 (ENSCWAG00000015468)	SGPP1 (ENSCWAG00000015483)	SYNE2 (ENSCWAG00000015671)	ESR2 (ENSCWAG00000017230)	AGBL1 (ENSCWAG00000017416)	NTRK3 (ENSCWAG00000017666)	MRPL46 (ENSCWAG00000020116)	MRPS11 (ENSCWAG00000003665)	DET1 (ENSCWAG00000003687)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT01000000214430.a.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000167452	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Carnivora	ANCESTRAL SPECIES	18	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000167452	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000154359.e	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000167452	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000167452	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00390000009268.y.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.j
Ursidae	ANCESTRAL SPECIES	6	ENSGT01000000214430.a.a.a.a.a.b.nb.a	ENSGT01000000214430.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.ob	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00390000009268.y.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535.f	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.j
Ursus	ANCESTRAL SPECIES	58				ENSGT01000000214430.a.a.a.a.a.b.nb.b.c.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535.f	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.j	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00450000040296
Polar bear	MODERN SPECIES	191				ENSUMAG00000005557	IFNE (ENSUMAG00000005586)	MTAP (ENSUMAG00000005601)	CDKN2B (ENSUMAG00000005604)	DMRTA1 (ENSUMAG00000005623)	ELAVL2 (ENSUMAG00000005644)	IZUMO3 (ENSUMAG00000005720)	ENSUMAG00000005731	CAAP1 (ENSUMAG00000005736)	PLAA (ENSUMAG00000005741)	IFT74 (ENSUMAG00000005746)	LRRC19 (ENSUMAG00000005751)	TEK (ENSUMAG00000005756) #22	MOB3B (ENSUMAG00000005779) #25	IFNK (ENSUMAG00000005782)	C9orf72 (ENSUMAG00000005785) #26	LINGO2 (ENSUMAG00000005792)	ENSUMAG00000005799	ACO1 (ENSUMAG00000005807)	RIGI (ENSUMAG00000005813)	TOPORS (ENSUMAG00000005821)	NDUFB6 (ENSUMAG00000005825)	TMEM215 (ENSUMAG00000005832)	APTX (ENSUMAG00000005837)	DNAJA1 (ENSUMAG00000005840)	SMU1 (ENSUMAG00000005842)	B4GALT1 (ENSUMAG00000005862)	SPINK4 (ENSUMAG00000005984)
American black bear	MODERN SPECIES	2869															IFT74 (ENSUAMG00000013917)	TEK (ENSUAMG00000013897) #22
Giant Panda	MODERN SPECIES	17	ENSAMEG00000020239	ENSAMEG00000030690	ENSAMEG00000028633	MTAP (ENSAMEG00000007509)	ENSAMEG00000019101	CDKN2B (ENSAMEG00000007545)	ENSAMEG00000009154	DMRTA1 (ENSAMEG00000007553)	ELAVL2 (ENSAMEG00000007555)	IZUMO3 (ENSAMEG00000007571)	TUSC1 (ENSAMEG00000023759)	CAAP1 (ENSAMEG00000005485)	PLAA (ENSAMEG00000005498)	IFT74 (ENSAMEG00000005542)	LRRC19 (ENSAMEG00000005554)	TEK (ENSAMEG00000001724) #22	ENSAMEG00000001808	ENSAMEG00000001815 #24	MOB3B (ENSAMEG00000001822) #25	IFNK (ENSAMEG00000018552)	C9orf72 (ENSAMEG00000001825) #26	LINGO2 (ENSAMEG00000019218)	ENSAMEG00000026262	ACO1 (ENSAMEG00000003746)	RIGI (ENSAMEG00000003766)	TOPORS (ENSAMEG00000003832)	SMIM27 (ENSAMEG00000027240)	NDUFB6 (ENSAMEG00000003836)	TMEM215 (ENSAMEG00000019433)	APTX (ENSAMEG00000007648)	DNAJA1 (ENSAMEG00000007589)
Mustelinae	ANCESTRAL SPECIES	98	ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.a.a	ENSGT01000000214430.a.a.a.a.a.b.pb.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000167452	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665
American mink	MODERN SPECIES	117	ENSNVIG00000012495	ENSNVIG00000012477	KLHL9 (ENSNVIG00000012468)	ENSNVIG00000012457	ENSNVIG00000012437	MTAP (ENSNVIG00000012386)	CDKN2B (ENSNVIG00000012369)	DMRTA1 (ENSNVIG00000012357)	ELAV2 (ENSNVIG00000012261)	IZUMO3 (ENSNVIG00000012191)	TUSC1 (ENSNVIG00000012160)	CAAP1 (ENSNVIG00000012140)	PLAA (ENSNVIG00000012114)	LRRC19 (ENSNVIG00000012104)	IFT74 (ENSNVIG00000012021)	TEK (ENSNVIG00000011869) #22	ENSNVIG00000011848	IFNK (ENSNVIG00000011839)	MOB3B (ENSNVIG00000011823) #25	CI072 (ENSNVIG00000011758) #26	LINGO2 (ENSNVIG00000011739)
Ferret	MODERN SPECIES	244	ENSMPUG00000019798	IFNE (ENSMPUG00000015977)	MTAP (ENSMPUG00000015976)	CDKN2A (ENSMPUG00000015974)	ENSMPUG00000015973	CDKN2B (ENSMPUG00000015971)	DMRTA1 (ENSMPUG00000015969)	ENSMPUG00000019796	ELAVL2 (ENSMPUG00000015967)	IZUMO3 (ENSMPUG00000015965)	ENSMPUG00000015963	CAAP1 (ENSMPUG00000015951)	PLAA (ENSMPUG00000015945)	LRRC19 (ENSMPUG00000015943)	IFT74 (ENSMPUG00000015939)	TEK (ENSMPUG00000015934) #22	EQTN (ENSMPUG00000015926) #24	MOB3B (ENSMPUG00000015925) #25	IFNK (ENSMPUG00000019794)	C9orf72 (ENSMPUG00000015924) #26	ENSMPUG00000015923	ENSMPUG00000019791	LINGO2 (ENSMPUG00000019789)
Canidae	ANCESTRAL SPECIES	9	ENSGT01000000214430.a.a.a.a.a.b.mb.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.b.mb.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535.d	ENSGT01020000230598	ENSGT00390000007535.c	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a
Canis_lupus	ANCESTRAL SPECIES	15	ENSGT01000000214430.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.b	ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535.c	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Dingo	MODERN SPECIES	366	ENSCAFG00020013769	ENSCAFG00020013776	IFNE (ENSCAFG00020013779)	MTAP (ENSCAFG00020013792)	ENSCAFG00020013796	CDKN2B (ENSCAFG00020013797)	DMRTA1 (ENSCAFG00020013824)	ELAVL2 (ENSCAFG00020013836)	ENSCAFG00020014371	IZUMO3 (ENSCAFG00020014376)	TUSC1 (ENSCAFG00020014387)	CAAP1 (ENSCAFG00020014399)	PLAA (ENSCAFG00020014401)	IFT74 (ENSCAFG00020014404)	LRRC19 (ENSCAFG00020014406)	TEK (ENSCAFG00020014418) #22	MOB3B (ENSCAFG00020014499) #25	IFNK (ENSCAFG00020014500)	C9orf72 (ENSCAFG00020014504) #26	LINGO2 (ENSCAFG00020014541)	ENSCAFG00020014544	ACO1 (ENSCAFG00020014553)	RIGI (ENSCAFG00020014567)	TOPORS (ENSCAFG00020015592)	ENSCAFG00020015593	TMEM215 (ENSCAFG00020015595)	APTX (ENSCAFG00020015598)	DNAJA1 (ENSCAFG00020015600)	SMU1 (ENSCAFG00020015611)	B4GALT1 (ENSCAFG00020015615)	SPINK4 (ENSCAFG00020015619)
Dog	MODERN SPECIES	2	IFNA7 (ENSCAFG00845016199)	MTAP (ENSCAFG00845016288)	CDKN2B (ENSCAFG00845016466)	DMRTA1 (ENSCAFG00845016666)	ENSCAFG00845016700	ELAVL2 (ENSCAFG00845016769)	ENSCAFG00845016853	ENSCAFG00845016912	IZUMO3 (ENSCAFG00845017047)	ENSCAFG00845017168	TUSC1 (ENSCAFG00845017215)	CAAP1 (ENSCAFG00845017294)	PLAA (ENSCAFG00845017393)	IFT74 (ENSCAFG00845017634)	LRRC19 (ENSCAFG00845017872)	TEK (ENSCAFG00845018055) #22	ENSCAFG00845018372	ENSCAFG00845018629 #24	MOB3B (ENSCAFG00845018684) #25	IFNK (ENSCAFG00845018736)	C9orf72 (ENSCAFG00845018783) #26	LINGO2 (ENSCAFG00845018972)	ENSCAFG00845018993	ENSCAFG00845019055	ACO1 (ENSCAFG00845019164)	TOPORS (ENSCAFG00845019455)	SMIM27 (ENSCAFG00845019514)	NDUFB6 (ENSCAFG00845019553)	TMEM215 (ENSCAFG00845019629)	APTX (ENSCAFG00845019738)	DNAJA1 (ENSCAFG00845019991)
Red fox	MODERN SPECIES	74				GLDN (ENSVVUG00000021363)	DMXL2 (ENSVVUG00000021316)	ELAVL2 (ENSVVUG00000021291)	ENSVVUG00000021279	ENSVVUG00000021268	IZUMO3 (ENSVVUG00000021264)	ENSVVUG00000021262	ENSVVUG00000021249	CAAP1 (ENSVVUG00000021240)	PLAA (ENSVVUG00000021232)	LRRC19 (ENSVVUG00000021229)	IFT74 (ENSVVUG00000021222)	TEK (ENSVVUG00000021213) #22	ENSVVUG00000021209	ENSVVUG00000021207 #24	MOB3B (ENSVVUG00000021206) #25	IFNK (ENSVVUG00000021204)	CUNH9orf72 (ENSVVUG00000021203) #26	LINGO2 (ENSVVUG00000021201)	ENSVVUG00000021196	ENSVVUG00000021183	ENSVVUG00000021181	ENSVVUG00000021164	ENSVVUG00000021159	ACO1 (ENSVVUG00000021152)	RIGI (ENSVVUG00000021149)	TOPORS (ENSVVUG00000021147)	NDUFB6 (ENSVVUG00000021143)
Felidae	ANCESTRAL SPECIES	16	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00390000012138.a.a.i.a.a	ENSGT00390000008732.a.a.c.b.a	ENSGT00940000156823.e	ENSGT00950000183152.A.v	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Panthera	ANCESTRAL SPECIES	11	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00390000012138.a.a.i.a.a	ENSGT00390000008732.a.a.c.b.a	ENSGT00940000156823.e	ENSGT00950000183152.A.v	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Tiger	MODERN SPECIES	588	IFNB1 (ENSPTIG00000006556)	ENSPTIG00000015362	ENSPTIG00000012484	ENSPTIG00000006494	IFNE (ENSPTIG00000006483)	MTAP (ENSPTIG00000010060)	ENSPTIG00000009528	DMRTA1 (ENSPTIG00000008302)	ELAVL2 (ENSPTIG00000005627)	ENSPTIG00000006398	IZUMO3 (ENSPTIG00000021039)	CAAP1 (ENSPTIG00000020860)	PLAA (ENSPTIG00000019644)	LRRC19 (ENSPTIG00000019449)	IFT74 (ENSPTIG00000018434)	TEK (ENSPTIG00000010193) #22	ENSPTIG00000008460 #24	MOB3B (ENSPTIG00000008390) #25
Panthera_a	ANCESTRAL SPECIES	10	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00390000012138.a.a.i.a.a	ENSGT00390000008732.a.a.c.b.a	ENSGT00940000156823.e	ENSGT00950000183152.A.v	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000153675.a.a.b.f.t	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
lion	MODERN SPECIES	13	ENSPLOG00000020743	IFNE (ENSPLOG00000020717)	MTAP (ENSPLOG00000020698)	CDKN2B (ENSPLOG00000020634)	DMRTA1 (ENSPLOG00000020604)	ENSPLOG00000020597	ENSPLOG00000020585	ELAVL2 (ENSPLOG00000020522)	ENSPLOG00000020502	IZUMO3 (ENSPLOG00000020427)	TUSC1 (ENSPLOG00000020292)	CAAP1 (ENSPLOG00000020232)	PLAA (ENSPLOG00000020119)	LRRC19 (ENSPLOG00000020088)	IFT74 (ENSPLOG00000020064)	TEK (ENSPLOG00000019607) #22	MOB3B (ENSPLOG00000019495) #25	IFNK (ENSPLOG00000019484)	C9orf72 (ENSPLOG00000019440) #26	LINGO2 (ENSPLOG00000019417)	ENSPLOG00000019372	ENSPLOG00000019344	ACO1 (ENSPLOG00000019279)	RIGI (ENSPLOG00000019121)	TOPORS (ENSPLOG00000019085)	SMIM27 (ENSPLOG00000019059)	NDUFB6 (ENSPLOG00000019010)	TMEM215 (ENSPLOG00000018972)	APTX (ENSPLOG00000018637)	ENSPLOG00000018522	SMU1 (ENSPLOG00000018481)
leopard	MODERN SPECIES	97												CAAP1 (ENSPPRG00000002323)	PLAA (ENSPPRG00000002951)	LRRC19 (ENSPPRG00000003025)	IFT74 (ENSPPRG00000003476)	TEK (ENSPPRG00000006220) #22	ENSPPRG00000007083 #24	MOB3B (ENSPPRG00000007413) #25	C9orf72 (ENSPPRG00000007614) #26	LINGO2 (ENSPPRG00000015990)	ENSPPRG00000008120	ENSPPRG00000008363	ENSPPRG00000008376	ACO1 (ENSPPRG00000009875)	RIGI (ENSPPRG00000010161)	TOPORS (ENSPPRG00000010420)	SMIM27 (ENSPPRG00000010819)	NDUFB6 (ENSPPRG00000011043)	ENSPPRG00000011147	TMEM215 (ENSPPRG00000016103)	APTX (ENSPPRG00000017524)
Cat	MODERN SPECIES	244	IFNA7 (ENSFCAG00000046651)	IFNW12 (ENSFCAG00000044935)	MTAP (ENSFCAG00000038221)	CDKN2A (ENSFCAG00000022826)	ENSFCAG00000038878	DMRTA1 (ENSFCAG00000014743)	ENSFCAG00000040447	ENSFCAG00000040593	ELAVL2 (ENSFCAG00000011976)	ENSFCAG00000025255	IZUMO3 (ENSFCAG00000015750)	CAAP1 (ENSFCAG00000022307)	PLAA (ENSFCAG00000023980)	IFT74 (ENSFCAG00000026070)	LRRC19 (ENSFCAG00000025095)	TEK (ENSFCAG00000002830) #22	MOB3B (ENSFCAG00000012089) #25	EQTN (ENSFCAG00000040310) #24	C9orf72 (ENSFCAG00000001914) #26	LINGO2 (ENSFCAG00000007073)	ENSFCAG00000048601	ENSFCAG00000032521	ENSFCAG00000048551	ACO1 (ENSFCAG00000001293)	RIGI (ENSFCAG00000001294)	TOPORS (ENSFCAG00000030664)	SMIM27 (ENSFCAG00000040674)	NDUFB6 (ENSFCAG00000001297)	ENSFCAG00000034917	APTX (ENSFCAG00000008728)	DNAJA1 (ENSFCAG00000008729)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.r	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007	ENSGT00940000155244
Chiroptera	ANCESTRAL SPECIES	40	ENSGT00940000154359.e	ENSGT01000000214430.a.a.a.a.a.a.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.r	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772
Microchiroptera	ANCESTRAL SPECIES	36	ENSGT01000000214430.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.b	ENSGT00940000154359.e	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.r	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000154367.b.o.b	ENSGT00940000154367.a	ENSGT00940000163051	ENSGT00940000153505.a.b.b	ENSGT00950000182890.D.d.c	ENSGT00510000048363	ENSGT00940000155950	ENSGT00520000055591.b	ENSGT00670000098074
Greater horseshoe bat	MODERN SPECIES	3	ENSRFEG00010007530	IFNE (ENSRFEG00010007517)	ENSRFEG00010007503	MTAP (ENSRFEG00010007485)	CDKN2A (ENSRFEG00010007449)	CDKN2B (ENSRFEG00010007418)	DMRTA1 (ENSRFEG00010007378)	ENSRFEG00010007353	ELAVL2 (ENSRFEG00010007282)	IZUMO3 (ENSRFEG00010007098)	TUSC1 (ENSRFEG00010007065)	CAAP1 (ENSRFEG00010007004)	PLAA (ENSRFEG00010006913)	LRRC19 (ENSRFEG00010006861)	IFT74 (ENSRFEG00010006800)	TEK (ENSRFEG00010006469) #22	MOB3B (ENSRFEG00010019145) #25	IFNK (ENSRFEG00010019129)	C9orf72 (ENSRFEG00010019054) #26	LINGO2 (ENSRFEG00010019029)	ACO1 (ENSRFEG00010018977)	ENSRFEG00010018955	ZNF782 (ENSRFEG00010018925)	ZNF510 (ENSRFEG00010018898)	ENSRFEG00010018848	ENSRFEG00010018807	ENSRFEG00010018789	ENSRFEG00010018774	ENSRFEG00010018758	ENSRFEG00010018726	PRXL2C (ENSRFEG00010018689)
Microbat	MODERN SPECIES	1283													PLAA (ENSMLUG00000007700)	IFT74 (ENSMLUG00000007728)	LRRC19 (ENSMLUG00000007756)	TEK (ENSMLUG00000009406) #22	ENSMLUG00000025852 #24	MOB3B (ENSMLUG00000009454) #25	IFNK (ENSMLUG00000009485)	C9orf72 (ENSMLUG00000009492) #26	LINGO2 (ENSMLUG00000006833)
Megabat	MODERN SPECIES	200																TEK (ENSPVAG00000014863) #22	ENSPVAG00000014864 #24
Equus	ANCESTRAL SPECIES	37	ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a.a.a	ENSGT01000000214430.a.a.b	ENSGT00950000182991.B.r.b	ENSGT00950000182991.B.r.a	ENSGT00950000182991.B.q	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT00950000184123	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000155007
Horse	MODERN SPECIES	15	ENSECAG00000054830	IFNE (ENSECAG00000004315)	ENSECAG00000037786	ENSECAG00000033009	ENSECAG00000040430	ENSECAG00000060049	CDKN2A (ENSECAG00000018552)	DMRTA1 (ENSECAG00000019138)	ELAVL2 (ENSECAG00000020142)	IZUMO3 (ENSECAG00000014102)	ENSECAG00000047777	CAAP1 (ENSECAG00000018209)	PLAA (ENSECAG00000020120)	IFT74 (ENSECAG00000021030)	LRRC19 (ENSECAG00000016547)	TEK (ENSECAG00000016566) #22	ENSECAG00000030328	EQTN (ENSECAG00000021018)	MOB3B (ENSECAG00000021621) #25	IFNK (ENSECAG00000021633)	C9orf72 (ENSECAG00000022028) #26	ENSECAG00000046957	ENSECAG00000043521	ENSECAG00000037182	ACO1 (ENSECAG00000014846)	RIGI (ENSECAG00000021989)	TOPORS (ENSECAG00000004655)	SMIM27 (ENSECAG00000042786)	TMEM215 (ENSECAG00000004732)	APTX (ENSECAG00000012674)	DNAJA1 (ENSECAG00000010324)
Donkey	MODERN SPECIES	15	ENSEASG00005032209	ENSEASG00005022446	ENSEASG00005030405	ENSEASG00005029169	ENSEASG00005025758	ENSEASG00005033213	CDKN2A (ENSEASG00005004708)	CDKN2B (ENSEASG00005029765)	DMRTA1 (ENSEASG00005036106)	ELAVL2 (ENSEASG00005004697)	IZUMO3 (ENSEASG00005031755)	CAAP1 (ENSEASG00005004687)	PLAA (ENSEASG00005004682)	LRRC19 (ENSEASG00005004679)	IFT74 (ENSEASG00005004662)	ENSEASG00005004648 #22	IFNK (ENSEASG00005004640)	MOB3B (ENSEASG00005004638) #25	C9orf72 (ENSEASG00005004632) #26	ENSEASG00005029524	LINGO2 (ENSEASG00005004629)	ACO1 (ENSEASG00005004602)	TOPORS (ENSEASG00005004584)	RIGI (ENSEASG00005004589)	SMIM27 (ENSEASG00005036167)	NDUFB6 (ENSEASG00005004574)	TMEM215 (ENSEASG00005032582)	APTX (ENSEASG00005004566)	DNAJA1 (ENSEASG00005004562)	SMU1 (ENSEASG00005004310)	B4GALT1 (ENSEASG00005004276)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158840 #22
Common shrew	MODERN SPECIES	1499																TEK (ENSSARG00000007431) #22	ENSSARG00000007457
Hedgehog	MODERN SPECIES	2094																TEK (ENSEEUG00000005759) #22
Atlantogenata	ANCESTRAL SPECIES	12			ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.i.a	ENSGT00940000153558.b.j	ENSGT00940000155007	ENSGT00940000155244
Xenarthra	ANCESTRAL SPECIES	813												ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000010786 #24
Sloth	MODERN SPECIES	1805																TEK (ENSCHOG00000006936) #22
Armadillo	MODERN SPECIES	379												ENSDNOG00000046080	CAAP1 (ENSDNOG00000016488)	PLAA (ENSDNOG00000033337)	IFT74 (ENSDNOG00000038538)	TEK (ENSDNOG00000008017) #22	ENSDNOG00000039989 #24
Afrotheria	ANCESTRAL SPECIES						ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000156806	ENSGT00940000153558.b.j	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269
Afrotheria_a	ANCESTRAL SPECIES				ENSGT01000000214430.a.a.a.a.a.b	ENSGT01000000214430.a.a.a.a.a.a	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017601	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00390000010786 #24	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00940000156806	ENSGT00940000153558.b.j	ENSGT00940000155007	ENSGT00940000155244	ENSGT01040000241496	ENSGT00450000040296
Elephant	MODERN SPECIES	472	ENSLAFG00000030457	ENSLAFG00000027976	ENSLAFG00000031123	MTAP (ENSLAFG00000009552)	ENSLAFG00000009554	CDKN2B (ENSLAFG00000022894)	DMRTA1 (ENSLAFG00000013860)	ELAVL2 (ENSLAFG00000009938)	ENSLAFG00000026655	IZUMO3 (ENSLAFG00000006472)	TUSC1 (ENSLAFG00000013180)	CAAP1 (ENSLAFG00000010933)	ENSLAFG00000010935	LRRC19 (ENSLAFG00000009391)	IFT74 (ENSLAFG00000012358)	TEK (ENSLAFG00000009659) #22	EQTN (ENSLAFG00000008794) #24	MOB3B (ENSLAFG00000008800) #25	IFNK (ENSLAFG00000004739)	C9orf72 (ENSLAFG00000008980) #26	LINGO2 (ENSLAFG00000007957)	ENSLAFG00000028487	ACO1 (ENSLAFG00000013470)	RIGI (ENSLAFG00000005416)	TOPORS (ENSLAFG00000005423)	NDUFB6 (ENSLAFG00000005434)	ENSLAFG00000032638	APTX (ENSLAFG00000005665)	DNAJA1 (ENSLAFG00000001527)	SMU1 (ENSLAFG00000001530)	B4GALT1 (ENSLAFG00000001532)
Hyrax	MODERN SPECIES	1615																TEK (ENSPCAG00000003547) #22	ENSPCAG00000003668 #24	MOB3B (ENSPCAG00000003728) #25
Tenrec	MODERN SPECIES	2007																TEK (ENSETEG00000010566) #22
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.a.b	ENSGT01000000214430.a.a.a.c.b	ENSGT01000000214430.a.a.a.c.a.a	ENSGT00950000182991.B	ENSGT00940000165099	ENSGT00940000162423.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810	ENSGT00940000154411.`b.i.e.a.a.a	ENSGT00950000182890.D.c.b.a.b.b.a.a.a.b.a
Marsupialia_b	ANCESTRAL SPECIES	18						ENSGT01000000214430.a.a.a.c.a.a	ENSGT00950000182991.B	ENSGT00940000162423.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810	ENSGT00940000154411.`b.i.e.a.a.a	ENSGT00950000182890.D.c.b.a.b.b.a.a.a.b.a.a	ENSGT00940000161837
Diprotodontia	ANCESTRAL SPECIES	75							ENSGT01000000214430.a.a.a.c.a.a	ENSGT00950000182991.B	ENSGT00940000162423.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810	ENSGT00940000154411.`b.i.e.a.a.a	ENSGT00950000182890.D.c.b.a.b.b.a.a.a.b.a.a	ENSGT00940000161837
Diprotodontia_a	ANCESTRAL SPECIES	52	ENSGT00940000158196	ENSGT00940000159053	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT01000000214430.a.a.a.c.a.a.a	ENSGT00950000182991.B	ENSGT00940000162423.a	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.b	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT01020000230598	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT00940000154810	ENSGT00940000163217.b.b	ENSGT00940000154411.`b.i.e.a.a.a	ENSGT00950000182890.D.c.b.a.b.b.a.a.a.b.a.a
koala	MODERN SPECIES	198								ELAVL2 (ENSPCIG00000011696)	ENSPCIG00000013951	ENSPCIG00000033841	TUSC1 (ENSPCIG00000013953)	PLAA (ENSPCIG00000002811)	LRRC19 (ENSPCIG00000002801)	IFT74 (ENSPCIG00000002769)	ENSPCIG00000002754	TEK (ENSPCIG00000002697) #22
Common wonbat	MODERN SPECIES	1066	ENSVURG00010006754	ENSVURG00010006749	CDKN2B (ENSVURG00010006741)	DMRTA1 (ENSVURG00010006734)	ELAVL2 (ENSVURG00010006699)	ENSVURG00010006681	ENSVURG00010006661	ENSVURG00010006647	ENSVURG00010006632	ENSVURG00010006621	ENSVURG00010006602	CAAP1 (ENSVURG00010006584)	PLAA (ENSVURG00010006575)	LRRC19 (ENSVURG00010006571)	IFT74 (ENSVURG00010006558)	TEK (ENSVURG00010006447) #22	ENSVURG00010006427	MOB3B (ENSVURG00010006420) #25	C9orf72 (ENSVURG00010006400) #26	ENSVURG00010006387	LINGO2 (ENSVURG00010006377)	ENSVURG00010006349	ENSVURG00010006340	ACO1 (ENSVURG00010006312)	RIGI (ENSVURG00010006292)	TOPORS (ENSVURG00010006285)	NDUFB6 (ENSVURG00010006272)	TMEM215 (ENSVURG00010006242)	PTGR1 (ENSVURG00010006233)	ENSVURG00010006205	ENSVURG00010006199
Wallaby	MODERN SPECIES	2875																ENSMEUG00000014486 #22
Tasmanian devil	MODERN SPECIES		APBA1 (ENSSHAG00000029098)	ENTREP1 (ENSSHAG00000008936)	ENSSHAG00000009848	FXN (ENSSHAG00000032150)	ENSSHAG00000026121	ENSSHAG00000005400	ENSSHAG00000004333	ENSSHAG00000002809	ENSSHAG00000024754	ELAVL2 (ENSSHAG00000026984)	ENSSHAG00000000769	TUSC1 (ENSSHAG00000022638)	PLAA (ENSSHAG00000005541)	ENSSHAG00000023351	IFT74 (ENSSHAG00000002400)	TEK (ENSSHAG00000022716) #22	C9orf72 (ENSSHAG00000003147) #26	LINGO2 (ENSSHAG00000006298)	ENSSHAG00000027663	ENSSHAG00000004638	ACO1 (ENSSHAG00000008924)	TOPORS (ENSSHAG00000025841)	NDUFB6 (ENSSHAG00000028385)	ENSSHAG00000029585	ENSSHAG00000012784	ENSSHAG00000031186	ENSSHAG00000013048	ENSSHAG00000022226	ENSSHAG00000023739	ENSSHAG00000013893	ENSSHAG00000007863
Opossum	MODERN SPECIES	5	CDKN2A (ENSMODG00000003820)	CDKN2B (ENSMODG00000040122)	DMRTA1 (ENSMODG00000003829)	ENSMODG00000003880	ELAVL2 (ENSMODG00000003936)	ENSMODG00000047560	ENSMODG00000028074	ENSMODG00000045961	ENSMODG00000048618	ENSMODG00000028960	TUSC1 (ENSMODG00000004001)	ENSMODG00000038345	PLAA (ENSMODG00000004155)	IFT74 (ENSMODG00000004236)	LRRC19 (ENSMODG00000004246)	TEK (ENSMODG00000004269) #22	ENSMODG00000004305	MOB3B (ENSMODG00000004294) #25	ENSMODG00000004309	C9orf72 (ENSMODG00000004328) #26	LINGO2 (ENSMODG00000025148)	ENSMODG00000046967	ENSMODG00000047494	ENSMODG00000044645	ENSMODG00000004341	ENSMODG00000041910	ENSMODG00000004424	ENSMODG00000005705	ENSMODG00000039203	ENSMODG00000040853	ACO1 (ENSMODG00000004463)
Platypus	MODERN SPECIES	88	ENSOANG00000041735	ENSOANG00000048601	ENSOANG00000040947	LMNB1 (ENSOANG00000011225)	ENSOANG00000045164	MTAP (ENSOANG00000013963)	ENSOANG00000037223	DMRTA1 (ENSOANG00000002763)	ELAVL2 (ENSOANG00000009634)	ENSOANG00000042518	CAAP1 (ENSOANG00000013234)	PLAA (ENSOANG00000028747)	IFT74 (ENSOANG00000013232)	ENSOANG00000032036	LRRC19 (ENSOANG00000022516)	TEK (ENSOANG00000013231) #22	ENSOANG00000010599	MOB3B (ENSOANG00000000338) #25	ENSOANG00000044403	C9orf72 (ENSOANG00000000337) #26	LINGO2 (ENSOANG00000000336)	ENSOANG00000040865	ENSOANG00000005426	ENSOANG00000022454	ENSOANG00000014846	ACO1 (ENSOANG00000012132)	RIGI (ENSOANG00000012131)	ENSOANG00000050129	NDUFB6 (ENSOANG00000045907)	TMEM215 (ENSOANG00000012130)	ENSOANG00000012129
Sauria	ANCESTRAL SPECIES	5	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00940000155225	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT01050000244941.A	ENSGT00940000158226
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00940000155225	ENSGT00390000006684	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061
Episquamata	ANCESTRAL SPECIES	6	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT00990000211106	ENSGT01000000214430.c	ENSGT00950000182991.B	ENSGT00940000162423	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d.a	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00940000155225	ENSGT00390000006684	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061
Laterata	ANCESTRAL SPECIES	7	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT00990000211106	ENSGT01000000214430.c	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000162423	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d.a	ENSGT01070000257213	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00940000155225	ENSGT00390000006684	ENSGT01050000244941.A	ENSGT00940000158226
Common wall lizard	MODERN SPECIES	8	BNC2 (ENSPMRG00000022111)	CCDC171 (ENSPMRG00000022077)	PSIP1 (ENSPMRG00000022058)	ENSPMRG00000022050	SNAPC3 (ENSPMRG00000022042)	TTC39B (ENSPMRG00000022017)	DMRTA1 (ENSPMRG00000022006)	ENSPMRG00000021998	ELAVL2 (ENSPMRG00000021981)	ENSPMRG00000021963	ENSPMRG00000021955	CAAP1 (ENSPMRG00000021942)	PLAA (ENSPMRG00000021908)	LRRC19 (ENSPMRG00000021898)	IFT74 (ENSPMRG00000021883)	TEK (ENSPMRG00000021875) #22	ENSPMRG00000021861	MOB3B (ENSPMRG00000021854) #25	ENSPMRG00000021849	SMC2 (ENSPMRG00000021801)	ENSPMRG00000021777	PTGR1 (ENSPMRG00000021759)	TXN (ENSPMRG00000021752)	TXNDC8 (ENSPMRG00000021737)	SVEP1 (ENSPMRG00000021582)	MUSK (ENSPMRG00000021520)	LPAR1 (ENSPMRG00000021509)	TMEM215 (ENSPMRG00000021506)	ENSPMRG00000021492	NDUFB6 (ENSPMRG00000021478)	TOPORS (ENSPMRG00000021472)
Argentine black and white tegu	MODERN SPECIES	37		ENSSMRG00000020947	ENSSMRG00000020940	ENSSMRG00000020939	MTAP (ENSSMRG00000020938)	CDKN2B (ENSSMRG00000020937)	CDKN2A (ENSSMRG00000020936)	ENSSMRG00000020935	DMRTA1 (ENSSMRG00000020934)	ENSSMRG00000020932	ELAVL2 (ENSSMRG00000020931)	CAAP1 (ENSSMRG00000020930)	PLAA (ENSSMRG00000020929)	LRRC19 (ENSSMRG00000020928)	IFT74 (ENSSMRG00000020927)	TEK (ENSSMRG00000020926) #22	ENSSMRG00000020925	MOB3B (ENSSMRG00000020922) #25	ENSSMRG00000020921	C9orf72 (ENSSMRG00000020909) #26	LINGO2 (ENSSMRG00000020908)	ENSSMRG00000020904	ENSSMRG00000020902	ACO1 (ENSSMRG00000020901)	RIGI (ENSSMRG00000020900)	TOPORS (ENSSMRG00000020899)	NDUFB6 (ENSSMRG00000020898)	ENSSMRG00000020897	LPAR1 (ENSSMRG00000020895)	MUSK (ENSSMRG00000020894)	SVEP1 (ENSSMRG00000020748)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT00990000211106	ENSGT01000000214430.c	ENSGT00950000182991.B	ENSGT00940000162423	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d.a	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT01000000216043	ENSGT00940000154259
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	7	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.d.b	ENSGT00990000211106	ENSGT01000000214430.c.h.a.a	ENSGT01000000214430.c.g.b	ENSGT00950000182991.B	ENSGT00940000162423	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840.c #22	ENSGT00390000014547	ENSGT01070000254102	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d.a	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT00940000154259
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	ENSNNAG00000013368	ENSNNAG00000013344	ENSNNAG00000013319	ENSNNAG00000013303	MTAP (ENSNNAG00000013279)	CDKN2B (ENSNNAG00000013257)	CDKN2A (ENSNNAG00000013215)	ENSNNAG00000013208	DMRTA1 (ENSNNAG00000013186)	ELAVL2 (ENSNNAG00000012976)	CAAP1 (ENSNNAG00000012949)	PLAA (ENSNNAG00000012916)	LRRC19 (ENSNNAG00000012889)	IFT74 (ENSNNAG00000012824)	ENSNNAG00000012746 #22	ENSNNAG00000012699 #22	ENSNNAG00000012677	MOB3B (ENSNNAG00000012660) #25	ENSNNAG00000012632	C9orf72 (ENSNNAG00000012579) #26	LINGO2 (ENSNNAG00000012568)	ENSNNAG00000012556	ENSNNAG00000012514	ACO1 (ENSNNAG00000011283)	RIGI (ENSNNAG00000010932)	TOPORS (ENSNNAG00000010898)	NDUFB6 (ENSNNAG00000010884)	LPAR1 (ENSNNAG00000010754)	ENSNNAG00000010735	ENSNNAG00000010723	SVEP1 (ENSNNAG00000010454)
Indian cobra	MODERN SPECIES	1	ENSNNAG00000007198	ENSNNAG00000013368	ENSNNAG00000013344	ENSNNAG00000013319	ENSNNAG00000013303	MTAP (ENSNNAG00000013279)	CDKN2B (ENSNNAG00000013257)	CDKN2A (ENSNNAG00000013215)	ENSNNAG00000013208	DMRTA1 (ENSNNAG00000013186)	ELAVL2 (ENSNNAG00000012976)	CAAP1 (ENSNNAG00000012949)	PLAA (ENSNNAG00000012916)	LRRC19 (ENSNNAG00000012889)	IFT74 (ENSNNAG00000012824)	ENSNNAG00000012746 #22	ENSNNAG00000012699 #22	ENSNNAG00000012677	MOB3B (ENSNNAG00000012660) #25	ENSNNAG00000012632	C9orf72 (ENSNNAG00000012579) #26	LINGO2 (ENSNNAG00000012568)	ENSNNAG00000012556	ENSNNAG00000012514	ACO1 (ENSNNAG00000011283)	RIGI (ENSNNAG00000010932)	TOPORS (ENSNNAG00000010898)	NDUFB6 (ENSNNAG00000010884)	LPAR1 (ENSNNAG00000010754)	ENSNNAG00000010735	ENSNNAG00000010723
Elapidae_a	ANCESTRAL SPECIES	76					ENSGT01000000214430.c.g.a	ENSGT01000000214430.c.g.b	ENSGT00950000182991.B	ENSGT00940000162423	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840.c #22	ENSGT00390000014547	ENSGT01070000254102	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d.a	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT00940000154259
Acanthophiinae	ANCESTRAL SPECIES	72					ENSGT01000000214430.c.g.a	ENSGT01000000214430.c.g.b	ENSGT00950000182991.B	ENSGT00940000162423	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840.c #22	ENSGT00390000014547	ENSGT01070000254102	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d.a	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT01030000238536
Eastern brown snake	MODERN SPECIES	60												CAAP1 (ENSPTXG00000014240)	PLAA (ENSPTXG00000014241)	IFT74 (ENSPTXG00000014242)	LRRC19 (ENSPTXG00000014246)	TEK (ENSPTXG00000014264) #22	ENSPTXG00000014622	ENSPTXG00000014623	MOB3B (ENSPTXG00000014624) #25	ENSPTXG00000014626	C9orf72 (ENSPTXG00000014627) #26	LINGO2 (ENSPTXG00000014628)	ENSPTXG00000014629	ENSPTXG00000014630	ACO1 (ENSPTXG00000014631)	RIGI (ENSPTXG00000014633)	ENSPTXG00000015266	NDUFB6 (ENSPTXG00000015267)	LPAR1 (ENSPTXG00000015269)	MUSK (ENSPTXG00000015271)	SVEP1 (ENSPTXG00000015272)
Mainland tiger snake	MODERN SPECIES	43					ENSNSUG00000007173	MTAP (ENSNSUG00000007179)	ENSNSUG00000007180	CDKN2B (ENSNSUG00000007182)	CDKN2A (ENSNSUG00000007188)	ENSNSUG00000007192	ELAVL2 (ENSNSUG00000007193)	CAAP1 (ENSNSUG00000007196)	PLAA (ENSNSUG00000007197)	IFT74 (ENSNSUG00000007198)	LRRC19 (ENSNSUG00000007199)	ENSNSUG00000007204 #22	ENSNSUG00000007205 #22	ENSNSUG00000007208	ENSNSUG00000007209	MOB3B (ENSNSUG00000007210) #25	ENSNSUG00000007232	C9orf72 (ENSNSUG00000007233) #26	LINGO2 (ENSNSUG00000007249)	ENSNSUG00000007250	ENSNSUG00000007255	ACO1 (ENSNSUG00000007256)	RIGI (ENSNSUG00000007261)	TOPORS (ENSNSUG00000007493)	NDUFB6 (ENSNSUG00000007494)	LPAR1 (ENSNSUG00000007497)	MUSK (ENSNSUG00000007498)
Blue-lipped sea krait	MODERN SPECIES	2592														LRRC19 (ENSLLTG00000006113)	IFT74 (ENSLLTG00000005884)	ENSLLTG00000005849 #22
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000158840.d #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000158840.d #22
Blue-lipped sea krait	MODERN SPECIES	8751																ENSLLTG00000017905 #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000158840.d #22
Mainland tiger snake	MODERN SPECIES	43				ENSNSUG00000007173	MTAP (ENSNSUG00000007179)	ENSNSUG00000007180	CDKN2B (ENSNSUG00000007182)	CDKN2A (ENSNSUG00000007188)	ENSNSUG00000007192	ELAVL2 (ENSNSUG00000007193)	CAAP1 (ENSNSUG00000007196)	PLAA (ENSNSUG00000007197)	IFT74 (ENSNSUG00000007198)	LRRC19 (ENSNSUG00000007199)	ENSNSUG00000007204 #22	ENSNSUG00000007205 #22	ENSNSUG00000007208	ENSNSUG00000007209	MOB3B (ENSNSUG00000007210) #25	ENSNSUG00000007232	C9orf72 (ENSNSUG00000007233) #26	LINGO2 (ENSNSUG00000007249)	ENSNSUG00000007250	ENSNSUG00000007255	ACO1 (ENSNSUG00000007256)	RIGI (ENSNSUG00000007261)	TOPORS (ENSNSUG00000007493)	NDUFB6 (ENSNSUG00000007494)	LPAR1 (ENSNSUG00000007497)	MUSK (ENSNSUG00000007498)	SVEP1 (ENSNSUG00000007505)
Lizard	MODERN SPECIES	1	ENSACAG00000025902	ENSACAG00000017572	ENSACAG00000024853	ENSACAG00000027003	MTAP (ENSACAG00000017549)	ENSACAG00000017544	DMRTA1 (ENSACAG00000017537)	ENSACAG00000043252	ELAVL2 (ENSACAG00000017521)	ENSACAG00000043694	CAAP1 (ENSACAG00000017515)	PLAA (ENSACAG00000017506)	LRRC19 (ENSACAG00000028864)	IFT74 (ENSACAG00000028763)	ENSACAG00000045268	ENSACAG00000017459 #22	PGAP4 (ENSACAG00000017458)	ALDOB (ENSACAG00000017436)	MRPL50 (ENSACAG00000039458)	PLPPR1 (ENSACAG00000017418)	ENSACAG00000039290	ENSACAG00000017412	SLC46A2 (ENSACAG00000017402)	SNX30 (ENSACAG00000017384)	ENSACAG00000034721	INIP (ENSACAG00000034986)	KIAA1958 (ENSACAG00000017372)	HSDL2 (ENSACAG00000017353)	PTBP3 (ENSACAG00000017316)	SUSD1 (ENSACAG00000022560)	UGCG (ENSACAG00000017299)
tuatara	MODERN SPECIES	1446																TEK (ENSSPUG00000018457) #22	ENSSPUG00000018396	MOB3B (ENSSPUG00000018389) #25	C9orf72 (ENSSPUG00000018374) #26	LINGO2 (ENSSPUG00000018365)	ENSSPUG00000018364
Archelosauria	ANCESTRAL SPECIES	34						ENSGT01000000214430.c.b.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00940000155225	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT01050000244941.A	ENSGT00940000158226
Archosauria	ANCESTRAL SPECIES	35										ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT00940000154259
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	67	DNAJC25 (ENSCPRG00005015080)	ECPAS (ENSCPRG00005015086)	SMC2 (ENSCPRG00005015114)	PTGR1 (ENSCPRG00005015132)	TXN (ENSCPRG00005015144)	SVEP1 (ENSCPRG00005015156)	MUSK (ENSCPRG00005015187)	LPAR1 (ENSCPRG00005015199)	ENSCPRG00005015219	TMEM215 (ENSCPRG00005015229)	CAAP1 (ENSCPRG00005015237)	PLAA (ENSCPRG00005015239)	IFT74 (ENSCPRG00005015270)	LRRC19 (ENSCPRG00005015340)	ENSCPRG00005015348 #22	ENSCPRG00005015360 #22	ENSCPRG00005015369	MOB3B (ENSCPRG00005015380) #25	ENSCPRG00005015381	C9orf72 (ENSCPRG00005015385) #26	LINGO2 (ENSCPRG00005015392)	ENSCPRG00005015402	ACO1 (ENSCPRG00005015409)	RIGI (ENSCPRG00005015434)	TOPORS (ENSCPRG00005015440)	ENSCPRG00005015442	NDUFB6 (ENSCPRG00005015444)	ENSCPRG00005015446	PRR16 (ENSCPRG00005015453)	HSD17B4 (ENSCPRG00005015460)	TNFAIP8 (ENSCPRG00005015471)
Australian saltwater crocodile	MODERN SPECIES	67	GNG10 (ENSCPRG00005015079)	DNAJC25 (ENSCPRG00005015080)	ECPAS (ENSCPRG00005015086)	SMC2 (ENSCPRG00005015114)	PTGR1 (ENSCPRG00005015132)	TXN (ENSCPRG00005015144)	SVEP1 (ENSCPRG00005015156)	MUSK (ENSCPRG00005015187)	LPAR1 (ENSCPRG00005015199)	ENSCPRG00005015219	TMEM215 (ENSCPRG00005015229)	CAAP1 (ENSCPRG00005015237)	PLAA (ENSCPRG00005015239)	IFT74 (ENSCPRG00005015270)	LRRC19 (ENSCPRG00005015340)	ENSCPRG00005015348 #22	ENSCPRG00005015360 #22	ENSCPRG00005015369	MOB3B (ENSCPRG00005015380) #25	ENSCPRG00005015381	C9orf72 (ENSCPRG00005015385) #26	LINGO2 (ENSCPRG00005015392)	ENSCPRG00005015402	ACO1 (ENSCPRG00005015409)	RIGI (ENSCPRG00005015434)	TOPORS (ENSCPRG00005015440)	ENSCPRG00005015442	NDUFB6 (ENSCPRG00005015444)	ENSCPRG00005015446	PRR16 (ENSCPRG00005015453)	HSD17B4 (ENSCPRG00005015460)
Aves	ANCESTRAL SPECIES	43	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621
Neognathae	ANCESTRAL SPECIES	19	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000162158	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000153612.A	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000162158	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00940000153612.A	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01000000214430.d	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000162158	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269
Golden eagle	MODERN SPECIES	91	SMC2 (ENSACCG00020015507)	PTGR1 (ENSACCG00020015542)	TXN (ENSACCG00020015566)	ENSACCG00020015704	MUSK (ENSACCG00020015789)	LPAR1 (ENSACCG00020011608)	TMEM215 (ENSACCG00020011631)	TOPORS (ENSACCG00020011650)	ELAVL2 (ENSACCG00020011673)	TUSC1 (ENSACCG00020011697)	ENSACCG00020011719	CAAP1 (ENSACCG00020011735)	PLAA (ENSACCG00020011763)	IFT74 (ENSACCG00020011802)	LRRC19 (ENSACCG00020011843)	TEK (ENSACCG00020011937) #22	ENSACCG00020011998	MOB3B (ENSACCG00020012016) #25	ENSACCG00020012034	ENSACCG00020012072	C9orf72 (ENSACCG00020012170) #26	LINGO2 (ENSACCG00020012222)	ENSACCG00020012246	CORO2A (ENSACCG00020012279)	TBC1D2 (ENSACCG00020012325)	ELP1 (ENSACCG00020012384)	ACTL7A (ENSACCG00020012462)	APTX (ENSACCG00020012484)	DNAJA1 (ENSACCG00020012517)	SMU1 (ENSACCG00020012545)	B4GALT1 (ENSACCG00020012578)
Kakapo	MODERN SPECIES	19	PTGR1 (ENSSHBG00005001584)	TXN (ENSSHBG00005001517)	SVEP1 (ENSSHBG00005001477)	MUSK (ENSSHBG00005001431)	LPAR1 (ENSSHBG00005000116)	TMEM215 (ENSSHBG00005000102)	TOPORS (ENSSHBG00005019596)	ENSSHBG00005019595	ELAVL2 (ENSSHBG00005019590)	TUSC1 (ENSSHBG00005019584)	ENSSHBG00005019583	CAAP1 (ENSSHBG00005019579)	PLAA (ENSSHBG00005019573)	LRRC19 (ENSSHBG00005019571)	IFT74 (ENSSHBG00005019568)	TEK (ENSSHBG00005019564) #22	ENSSHBG00005019560	ENSSHBG00005019558	MOB3B (ENSSHBG00005019556) #25	C9orf72 (ENSSHBG00005019551) #26	LINGO2 (ENSSHBG00005019547)	ENSSHBG00005019545	ENSSHBG00005019541	TBC1D2 (ENSSHBG00005019534)	ELP1 (ENSSHBG00005019522)	ACTL7A (ENSSHBG00005019520)	APTX (ENSSHBG00005019517)	DNAJA1 (ENSSHBG00005019514)	SMU1 (ENSSHBG00005019511)	B4GALT1 (ENSSHBG00005019509)	XPA (ENSSHBG00005019494)
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00940000153612.A	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00390000002721	ENSGT00390000001733
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00940000153612.A	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00390000002721	ENSGT00390000001733
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00940000153612.A	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00390000002721	ENSGT00390000001733
Medium ground finch	MODERN SPECIES	82												CAAP1 (ENSGFOG00000012307)	PLAA (ENSGFOG00000012301)	LRRC19 (ENSGFOG00000012300)	IFT74 (ENSGFOG00000012292)	TEK (ENSGFOG00000012222) #22	MOB3B (ENSGFOG00000012198) #25	ENSGFOG00000012195	C9orf72 (ENSGFOG00000012183) #26	LINGO2 (ENSGFOG00000012178)	ENSGFOG00000012175	CORO2A (ENSGFOG00000012168)	ENSGFOG00000012160	ENSGFOG00000012154	ELP1 (ENSGFOG00000009724)	APTX (ENSGFOG00000009600)	DNAJA1 (ENSGFOG00000009588)	SMU1 (ENSGFOG00000009577)	B4GALT1 (ENSGFOG00000009364)	SPINK4 (ENSGFOG00000009337)	XPA (ENSGFOG00000009311)
Passeroidea	ANCESTRAL SPECIES	23	ENSGT00940000153612.A	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00390000002721	ENSGT00390000001733
Common canary	MODERN SPECIES	43	TMEM215 (ENSSCAG00000010689)	LPAR1 (ENSSCAG00000010697)	MUSK (ENSSCAG00000010714)	SVEP1 (ENSSCAG00000010764)	ENSSCAG00000010849	TXN (ENSSCAG00000010851)	PTGR1 (ENSSCAG00000010857)	SMC2 (ENSSCAG00000010864)	ECPAS (ENSSCAG00000010882)	DNAJC25 (ENSSCAG00000010904)	GNG10 (ENSSCAG00000010907)	CAAP1 (ENSSCAG00000010913)	PLAA (ENSSCAG00000010918)	IFT74 (ENSSCAG00000010949)	LRRC19 (ENSSCAG00000011014)	TEK (ENSSCAG00000011019) #22	DNAJA1 (ENSSCAG00000011025)	APTX (ENSSCAG00000011031)	ELP1 (ENSSCAG00000011045)	TBC1D2 (ENSSCAG00000011069)	CORO2A (ENSSCAG00000011077)	TDRD7 (ENSSCAG00000011100)	TMOD1 (ENSSCAG00000011149)	ENSSCAG00000011155	NCBP1 (ENSSCAG00000011169)	XPA (ENSSCAG00000011276)	SPINK4 (ENSSCAG00000011303)	B4GALT1 (ENSSCAG00000011315)	SMU1 (ENSSCAG00000011327)	ENSSCAG00000011338	ENSSCAG00000011351
Zebra finch	MODERN SPECIES	104	ENSTGUG00000001308	TMEM215 (ENSTGUG00000001312)	TOPORS (ENSTGUG00000001314)	GRAMD2B (ENSTGUG00000001316)	ALDH7A1 (ENSTGUG00000001320)	ENSTGUG00000021693	FEM1C (ENSTGUG00000025986)	CCDC112 (ENSTGUG00000001336)	PGGT1B (ENSTGUG00000029509)	TRIM36 (ENSTGUG00000001340)	KCNN2 (ENSTGUG00000001344)	ENSTGUG00000003755	ELAVL2 (ENSTGUG00000001349)	ENSTGUG00000024566	CAAP1 (ENSTGUG00000001360)	TEK (ENSTGUG00000001382) #22	ENSTGUG00000021792	ENSTGUG00000001397	C9orf72 (ENSTGUG00000001401) #26	LINGO2 (ENSTGUG00000001404)	ENSTGUG00000023448	ENSTGUG00000001408	TBC1D2 (ENSTGUG00000001416)	ELP1 (ENSTGUG00000001421)	APTX (ENSTGUG00000001441)	DNAJA1 (ENSTGUG00000001446)	SMU1 (ENSTGUG00000001458)	B4GALT1 (ENSTGUG00000023510)	SPINK4 (ENSTGUG00000001467)	XPA (ENSTGUG00000001469)	NCBP1 (ENSTGUG00000001472)
Flycatcher	MODERN SPECIES	561	ENSFALG00000000186	PTGR1 (ENSFALG00000000189)	TXN (ENSFALG00000027586)	SVEP1 (ENSFALG00000000200)	MUSK (ENSFALG00000000230)	ENSFALG00000000243	ENSFALG00000026797	ENSFALG00000000248	ENSFALG00000027071	ENSFALG00000015114	ENSFALG00000028410	ELAVL2 (ENSFALG00000024654)	PLAA (ENSFALG00000007348)	LRRC19 (ENSFALG00000026185)	IFT74 (ENSFALG00000007339)	TEK (ENSFALG00000007333) #22	ENSFALG00000027552	MOB3B (ENSFALG00000001250) #25	ENSFALG00000023720	ENSFALG00000023278	C9orf72 (ENSFALG00000001245) #26	LINGO2 (ENSFALG00000015152)	ENSFALG00000001241	ENSFALG00000001238	ENSFALG00000001235	APTX (ENSFALG00000001230)	DNAJA1 (ENSFALG00000001223)	SMU1 (ENSFALG00000001219)	B4GALT1 (ENSFALG00000022986)	SPINK4 (ENSFALG00000001213)	XPA (ENSFALG00000001207)
Great tit	MODERN SPECIES	642	ECPAS (ENSPMJG00000005181)	SMC2 (ENSPMJG00000005108)	PTGR1 (ENSPMJG00000005085)	TXN (ENSPMJG00000005083)	SVEP1 (ENSPMJG00000005077)	MUSK (ENSPMJG00000005068)	LPAR1 (ENSPMJG00000005057)	ENSPMJG00000005018	TMEM215 (ENSPMJG00000005015)	TOPORS (ENSPMJG00000005011)	ELAVL2 (ENSPMJG00000004996)	CAAP1 (ENSPMJG00000004955)	PLAA (ENSPMJG00000004947)	LRRC19 (ENSPMJG00000004944)	IFT74 (ENSPMJG00000004941)	TEK (ENSPMJG00000004938) #22	ENSPMJG00000004937	ENSPMJG00000004929 ##25	C9orf72 (ENSPMJG00000004926) #26	LINGO2 (ENSPMJG00000004909)	ENSPMJG00000004887	CORO2A (ENSPMJG00000004881)	TBC1D2 (ENSPMJG00000004857)	ELP1 (ENSPMJG00000004844)	APTX (ENSPMJG00000004842)	DNAJA1 (ENSPMJG00000004840)	SMU1 (ENSPMJG00000004836)	B4GALT1 (ENSPMJG00000004819)	SPINK4 (ENSPMJG00000004804)	XPA (ENSPMJG00000004738)	NCBP1 (ENSPMJG00000004725)
Galloanserae	ANCESTRAL SPECIES	18	ENSGT00550000074857	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000162158	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00940000162270.b
Anatidae	ANCESTRAL SPECIES	12	ENSGT00950000183096.a.b	ENSGT00940000161837	ENSGT01080000257332.A.b.b.a.b	ENSGT00940000154136.k.b.b.b.b.a	ENSGT00940000158875	ENSGT00390000004279	ENSGT00950000182987.c.b	ENSGT00500000045018	ENSGT00390000002866.b	ENSGT00940000158571	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000162158	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00940000162270.b
Duck	MODERN SPECIES	4281	SLC46A2 (ENSAPLG00000006417)	ENSAPLG00000006575	ENSAPLG00000026095	PLPPR1 (ENSAPLG00000006758)	MRPL50 (ENSAPLG00000000732)	ALDOB (ENSAPLG00000007042)	PGAP4 (ENSAPLG00000007344)	RNF20 (ENSAPLG00000007347)	GRIN3A (ENSAPLG00000008012)	ENSAPLG00000021419	TUSC1 (ENSAPLG00000029689)	CAAP1 (ENSAPLG00000014602)	PLAA (ENSAPLG00000014215)	LRRC19 (ENSAPLG00000016953)	IFT74 (ENSAPLG00000013715)	TEK (ENSAPLG00000012815) #22	ENSAPLG00000012811	ENSAPLG00000024121	ENSAPLG00000020337	MOB3B (ENSAPLG00000004299) #25	C9orf72 (ENSAPLG00000004240) #26	LINGO2 (ENSAPLG00000030866)	ENSAPLG00000030215	ENSAPLG00000029364	ENSAPLG00000026111	ENSAPLG00000023458	ENSAPLG00000027349	ENSAPLG00000024501	ENSAPLG00000016832	CORO2A (ENSAPLG00000014225)	TBC1D2 (ENSAPLG00000028461)
Pink-footed goose	MODERN SPECIES	185												CAAP1 (ENSABRG00000015156)	PLAA (ENSABRG00000015042)	LRRC19 (ENSABRG00000015031)	IFT74 (ENSABRG00000014926)	TEK (ENSABRG00000014754) #22	ENSABRG00000014708	MOB3B (ENSABRG00000014703) #25	C9orf72 (ENSABRG00000014691) #26	LINGO2 (ENSABRG00000014678)
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00940000161169	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00940000160596.b.a.b	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00940000162270.b	ENSGT00390000002721
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000154810	ENSGT00940000154259	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT00940000163785.a.b	ENSGT00940000161169	ENSGT00390000006684	ENSGT00530000064170.e	ENSGT00940000156823.e	ENSGT00940000160596.b.a.b	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT01050000244898.a.a.a.b #25	ENSGT01000000214430.d	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000155598	ENSGT00940000159937	ENSGT00390000013344	ENSGT00940000156806	ENSGT00940000153558.b	ENSGT00940000155007	ENSGT00940000155244	ENSGT00530000064269	ENSGT00940000162270.b	ENSGT00390000002721
Chicken	MODERN SPECIES	131	TMEM215 (ENSGALG00010005601)	ENSGALG00010005605	ENSGALG00010005622	TOPORS (ENSGALG00010005637)	ELAVL2 (ENSGALG00010005738)	ENSGALG00010005916	ENSGALG00010005930	ENSGALG00010007774	ENSGALG00010006370	TUSC1 (ENSGALG00010007437)	ENSGALG00010007770	CAAP1 (ENSGALG00010006378)	PLAA (ENSGALG00010006465)	IFT74 (ENSGALG00010006480)	LRRC19 (ENSGALG00010006503)	TEK (ENSGALG00010006538) #22	MOB3B (ENSGALG00010006544) #25	ENSGALG00010006553	C9orf72 (ENSGALG00010006249) #26	LINGO2 (ENSGALG00010006701)	ENSGALG00010007443	CORO2A (ENSGALG00010005881)	TBC1D2 (ENSGALG00010008127)	ELP1 (ENSGALG00010008136)	APTX (ENSGALG00010008141)	DNAJA1 (ENSGALG00010008149)	SMU1 (ENSGALG00010008153)	B4GALT1 (ENSGALG00010009486)	SPINK4 (ENSGALG00010009520)	FOXE1 (ENSGALG00010009746)	XPA (ENSGALG00010009534)
Turkey	MODERN SPECIES	1299	TXN (ENSMGAG00000008580)	SVEP1 (ENSMGAG00000020191)	MUSK (ENSMGAG00000008593)	LPAR1 (ENSMGAG00000008658)	ENSMGAG00000019569	ENSMGAG00000022350	ENSMGAG00000021688	ENSMGAG00000022368	ENSMGAG00000018140	ENSMGAG00000020670	PLAA (ENSMGAG00000019035)	CAAP1 (ENSMGAG00000008677)	ENSMGAG00000018201	IFT74 (ENSMGAG00000018040)	LRRC19 (ENSMGAG00000022089)	TEK (ENSMGAG00000008692) #22	MOB3B (ENSMGAG00000008686) #25	ENSMGAG00000020764	C9orf72 (ENSMGAG00000008707) #26	LINGO2 (ENSMGAG00000022924)	ENSMGAG00000008868	ENSMGAG00000005740	ENSMGAG00000018572	ENSMGAG00000008884	ENSMGAG00000005736	ENSMGAG00000004736	ENSMGAG00000009023	ENSMGAG00000019009	ENSMGAG00000009051	ENSMGAG00000021995	ENSMGAG00000008718
Japanese quail	MODERN SPECIES	699	NCBP1 (ENSCJPG00005003715)	XPA (ENSCJPG00005003712)	SPINK4 (ENSCJPG00005003706)	B4GALT1 (ENSCJPG00005003705)	SMU1 (ENSCJPG00005003703)	DNAJA1 (ENSCJPG00005003694)	APTX (ENSCJPG00005003689)	ELP1 (ENSCJPG00005003677)	TBC1D2 (ENSCJPG00005003671)	CORO2A (ENSCJPG00005003663)	ENSCJPG00005003658	LINGO2 (ENSCJPG00005003645)	C9orf72 (ENSCJPG00005003638) #26	ENSCJPG00005003637	MOB3B (ENSCJPG00005003636) #25	TEK (ENSCJPG00005003628) #22	LRRC19 (ENSCJPG00005003623)	IFT74 (ENSCJPG00005003620)	PLAA (ENSCJPG00005003616)	CAAP1 (ENSCJPG00005003615)	ENSCJPG00005003614	TUSC1 (ENSCJPG00005003612)	ENSCJPG00005003607	ELAVL2 (ENSCJPG00005003604)	TOPORS (ENSCJPG00005003599)	TMEM215 (ENSCJPG00005003598)	ENSCJPG00005003597	ENSCJPG00005003584	LPAR1 (ENSCJPG00005003567)	MUSK (ENSCJPG00005003566)	SVEP1 (ENSCJPG00005003526)
African ostrich	DUPLICATION
African ostrich	DUPLICATION
African ostrich	MODERN SPECIES	186												CAAP1 (ENSSCUG00000003115)	PLAA (ENSSCUG00000003117)	IFT74 (ENSSCUG00000003123)	LRRC19 (ENSSCUG00000003128)	ENSSCUG00000003129 #22	ENSSCUG00000003132 #22	ENSSCUG00000003134	MOB3B (ENSSCUG00000003137) #25	ENSSCUG00000003138	C9orf72 (ENSSCUG00000003139) #26	LINGO2 (ENSSCUG00000003142)	ENSSCUG00000003146
African ostrich	MODERN SPECIES	186											CAAP1 (ENSSCUG00000003115)	PLAA (ENSSCUG00000003117)	IFT74 (ENSSCUG00000003123)	LRRC19 (ENSSCUG00000003128)	ENSSCUG00000003129 #22	ENSSCUG00000003132 #22	ENSSCUG00000003134	MOB3B (ENSSCUG00000003137) #25	ENSSCUG00000003138	C9orf72 (ENSSCUG00000003139) #26	LINGO2 (ENSSCUG00000003142)	ENSSCUG00000003146
African ostrich	MODERN SPECIES	568															ENSSCUG00000011032	ENSSCUG00000011030 #22	ENSSCUG00000011029
Cryptodira	ANCESTRAL SPECIES	36						ENSGT01000000214430.c.b.b	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000160640.a	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT01000000216043
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000154930	ENSGT00390000017970.g	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT01000000214430.c.b.b.a	ENSGT00950000182991.B	ENSGT00940000163078.b	ENSGT00940000163078.a	ENSGT00940000160640.a	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621.a.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT01000000216043
Emydidae	ANCESTRAL SPECIES	20	ENSGT00390000017970.g	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT01000000214430.c.b.b.a	ENSGT01000000214430.c.b.b.b.a	ENSGT00950000182991.B	ENSGT00940000163078.b	ENSGT00940000163078.a	ENSGT00940000160640.a	ENSGT00940000156823.e	ENSGT00390000013920	ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621.b	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT00940000163785.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT01000000216043
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2473	ENSTMTG00000022912	ENSTMTG00000022936	ENSTMTG00000022941	ENSTMTG00000022943	ENSTMTG00000022944	ENSTMTG00000022946	ENSTMTG00000022950	ENSTMTG00000022952	ENSTMTG00000022954	ENSTMTG00000022959	TUSC1 (ENSTMTG00000022967)	ENSTMTG00000022969	ENSTMTG00000022973	ENSTMTG00000022978	ENSTMTG00000022983	ENSTMTG00000022996 #22	ENSTMTG00000023008	ENSTMTG00000023009 #25	ENSTMTG00000023011 #26	ENSTMTG00000023016	ENSTMTG00000018430	ENSTMTG00000018441	ENSTMTG00000018475	ENSTMTG00000018655	ENSTMTG00000019813	ENSTMTG00000019818	ENSTMTG00000019824	ENSTMTG00000019831	ENSTMTG00000019870	ENSTMTG00000019894	ENSTMTG00000019897
Three-toed box turtle	MODERN SPECIES	2488	ENSTMTG00000023085	ENSTMTG00000023094	ENSTMTG00000023102	ENSTMTG00000023104	ENSTMTG00000023105	ENSTMTG00000023107	ENSTMTG00000023109	ENSTMTG00000023110	ENSTMTG00000023111	ENSTMTG00000023112	ENSTMTG00000011041	ENSTMTG00000011215	ENSTMTG00000011230	ENSTMTG00000011253	ENSTMTG00000011309	ENSTMTG00000011395 #22	ENSTMTG00000012177	ENSTMTG00000012219 #25	ENSTMTG00000012235 #26	ENSTMTG00000012261	ENSTMTG00000012269	ENSTMTG00000012290	ENSTMTG00000012329	ENSTMTG00000012379	ENSTMTG00000012596	ENSTMTG00000012606	ENSTMTG00000012612	ENSTMTG00000012636	ENSTMTG00000012742	ENSTMTG00000012761	ENSTMTG00000012830
painted turtle	MODERN SPECIES	711					ENSCPBG00000007771	MTAP (ENSCPBG00000007784)	ENSCPBG00000007792	ENSCPBG00000007794	ENSCPBG00000007805	ELAVL2 (ENSCPBG00000007841)	TUSC1 (ENSCPBG00000007880)	CAAP1 (ENSCPBG00000007886)	PLAA (ENSCPBG00000007890)	IFT74 (ENSCPBG00000007897)	LRRC19 (ENSCPBG00000007908)	TEK (ENSCPBG00000007922) #22	ENSCPBG00000007974	MOB3B (ENSCPBG00000007995) #25	C9orf72 (ENSCPBG00000008016) #26	LINGO2 (ENSCPBG00000008029)	ENSCPBG00000008049	ENSCPBG00000008063	ACO1 (ENSCPBG00000008077)	RIGI (ENSCPBG00000008101)	TOPORS (ENSCPBG00000008127)	NDUFB6 (ENSCPBG00000008138)	TMEM215 (ENSCPBG00000008143)	ENSCPBG00000008151	LPAR1 (ENSCPBG00000008165)	ENSCPBG00000008169	ENSCPBG00000008172
Testudinidae	ANCESTRAL SPECIES	38												ENSGT00390000017010	ENSGT00550000074944	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000166621.a.b	ENSGT00940000166621.a.a	ENSGT00940000157772	ENSGT00940000153173.a	ENSGT00530000064170.e	ENSGT00390000007535	ENSGT00390000006684	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000156061	ENSGT01000000216043
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	990												CAAP1 (ENSCABG00000013677)	PLAA (ENSCABG00000013687)	IFT74 (ENSCABG00000013774)	LRRC19 (ENSCABG00000013997)	ENSCABG00000014003 #22	ENSCABG00000014009 #22	ENSCABG00000014014	MOB3B (ENSCABG00000014018) #25	ENSCABG00000014022 #26
Abingdon island giant tortoise	MODERN SPECIES	990											CAAP1 (ENSCABG00000013677)	PLAA (ENSCABG00000013687)	IFT74 (ENSCABG00000013774)	LRRC19 (ENSCABG00000013997)	ENSCABG00000014003 #22	ENSCABG00000014009 #22	ENSCABG00000014014	MOB3B (ENSCABG00000014018) #25	ENSCABG00000014022 #26
Goode s thornscrub tortoise	MODERN SPECIES	20	GLDC (ENSGEVG00005013317)	UHRF2 (ENSGEVG00005013188)	KIAA2026 (ENSGEVG00005013144)	ENSGEVG00005013096	ENSGEVG00005013057	MTAP (ENSGEVG00005013037)	ENSGEVG00005012973	ENSGEVG00005012955	DMRTA1 (ENSGEVG00005012898)	ELAVL2 (ENSGEVG00005012636)	ENSGEVG00005012547	CAAP1 (ENSGEVG00005012523)	PLAA (ENSGEVG00005012496)	LRRC19 (ENSGEVG00005012411)	IFT74 (ENSGEVG00005011566)	TEK (ENSGEVG00005011363) #22	ENSGEVG00005011265	MOB3B (ENSGEVG00005011222) #25	C9orf72 (ENSGEVG00005011174) #26	LINGO2 (ENSGEVG00005011148)	ENSGEVG00005011025	ACO1 (ENSGEVG00005010924)	RIGI (ENSGEVG00005010865)	TOPORS (ENSGEVG00005010840)	NDUFB6 (ENSGEVG00005010822)	TMEM215 (ENSGEVG00005010801)	LPAR1 (ENSGEVG00005010782)	MUSK (ENSGEVG00005010668)	SVEP1 (ENSGEVG00005010288)	ENSGEVG00005010254	ENSGEVG00005010207
Chinese turtle	MODERN SPECIES	1360											ENSPSIG00000000932	CAAP1 (ENSPSIG00000006961)	PLAA (ENSPSIG00000008169)	IFT74 (ENSPSIG00000009581)	LRRC19 (ENSPSIG00000011620)	TEK (ENSPSIG00000011849) #22	ENSPSIG00000014971	MOB3B (ENSPSIG00000015035) #25	C9orf72 (ENSPSIG00000015051) #26
Anura	ANCESTRAL SPECIES	55	ENSGT00940000157979	ENSGT00390000014471	ENSGT00940000160867	ENSGT00390000018845.e	ENSGT00940000156411	ENSGT00390000012078.b.`b	ENSGT00940000156229	ENSGT00950000182991.B	ENSGT00940000163078	ENSGT00940000160640	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00550000074944	ENSGT00940000161278	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b.c #25	ENSGT00390000005644 #26	ENSGT00940000156665	ENSGT00940000161521	ENSGT00940000162206.b	ENSGT00940000160047	ENSGT00940000154197	ENSGT00940000165795	ENSGT01090000262497	ENSGT00390000000920	ENSGT00940000160475	ENSGT00390000002869	ENSGT00940000164585.d	ENSGT00390000008274
Frog	MODERN SPECIES		TAL2 (ENSXETG00000045275)	tmem38b (ENSXETG00000000907)	znf462 (ENSXETG00000005759)	rad23b (ENSXETG00000005751)	klf4 (ENSXETG00000005739)	ENSXETG00000049369	mtap (ENSXETG00000005467)	cdkn2b (ENSXETG00000005465)	dmrta1 (ENSXETG00000005462)	ENSXETG00000041921	elavl2 (ENSXETG00000038617)	caap1 (ENSXETG00000009386)	plaa (ENSXETG00000009385)	ift74 (ENSXETG00000009383)	ENSXETG00000036813	tek (ENSXETG00000009382) #22	XB5934250 [provisional] (ENSXETG00000009381)	mob3b (ENSXETG00000009377) #25	c9orf72 (ENSXETG00000009376) #26	ENSXETG00000047807	ENSXETG00000045655	ENSXETG00000042396	ENSXETG00000049011	ENSXETG00000048307	ENSXETG00000045374	ENSXETG00000042156	ENSXETG00000044449	ENSXETG00000043398	ENSXETG00000048093	crygdl2.2 (ENSXETG00000041676)	ENSXETG00000046145
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000000745	ENSLLEG00000000656	CDKN2A (ENSLLEG00000000609)	ENSLLEG00000000594	DMRTA1 (ENSLLEG00000000586)	ENSLLEG00000000574	ELAVL2 (ENSLLEG00000000399)	ENSLLEG00000000343	ENSLLEG00000000331	ENSLLEG00000000327	CAAP1 (ENSLLEG00000000312)	PLAA (ENSLLEG00000000270)	LRRC19 (ENSLLEG00000000240)	ENSLLEG00000000213	ENSLLEG00000000203	TEK (ENSLLEG00000000184) #22	ENSLLEG00000000118	ENSLLEG00000000104	MOB3B (ENSLLEG00000000096) #25	C9orf72 (ENSLLEG00000000062) #26	ENSLLEG00000000050	LINGO2 (ENSLLEG00000000041)	ENSLLEG00000000034	ENSLLEG00000000026	ENSLLEG00000000019	ENSLLEG00000000014	ENSLLEG00000004166	ENSLLEG00000004162	ENSLLEG00000004161	ENSLLEG00000004160	ENSLLEG00000004156
Coelacanth	MODERN SPECIES	1192													PLAA (ENSLACG00000012900)	IFT74 (ENSLACG00000012545)	LRRC19 (ENSLACG00000012490)	TEK (ENSLACG00000009753) #22	ENSLACG00000009067	MOB3B (ENSLACG00000005921) #25	C9orf72 (ENSLACG00000003836) #26
Actinopterygii	ANCESTRAL SPECIES	120	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT00940000161837	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000156229	ENSGT00390000012078.b	ENSGT00940000156411	ENSGT00390000018845.e	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000165347	ENSGT01050000244898.a.a.a.b #25	ENSGT00390000007109	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805
Neopterygii	ANCESTRAL SPECIES	36	ENSGT00440000039527	ENSGT00940000156729	ENSGT01050000244924.a.a.a	ENSGT00390000013892	ENSGT00390000012898	ENSGT00390000013037	ENSGT00940000168470	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000153212	ENSGT00940000155803	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000007109	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00940000159487	ENSGT00940000161788	ENSGT00390000008823	ENSGT00390000003755	ENSGT00390000001566	ENSGT00940000157449	ENSGT00950000183065.C
Osteoglossocephalai	ANCESTRAL SPECIES	11	ENSGT00940000158994	ENSGT00390000006366	ENSGT00440000039527	ENSGT00940000156729	ENSGT01050000244924.a.a.a	ENSGT00390000013892	ENSGT00390000012898	ENSGT00390000013037	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000153212	ENSGT00940000155803	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00390000007109	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00940000159487	ENSGT00940000161788	ENSGT00390000008823	ENSGT00390000001566	ENSGT00940000157449	ENSGT00940000167600	ENSGT00940000159129
Clupeocephala	ANCESTRAL SPECIES	54	ENSGT00940000158994	ENSGT00390000006366	ENSGT00440000039527	ENSGT00940000156729	ENSGT01050000244924.a.a.a	ENSGT00390000012898	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000172372	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00390000001566	ENSGT00940000157449	ENSGT00940000167600	ENSGT00940000159129	ENSGT01050000245095	ENSGT00940000156170	ENSGT01030000234618.E
Otomorpha	ANCESTRAL SPECIES	794															ENSGT00940000161278	ENSGT00940000158840 #22
Clupeiformes	ANCESTRAL SPECIES	39	ENSGT01030000234517.E.c	ENSGT00940000157272.h	ENSGT00940000155578.e.a.a.b	ENSGT00950000183252	ENSGT00940000153472.a.b	ENSGT00530000063974.b	ENSGT00530000063404.a	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212.z	ENSGT00390000014471	ENSGT00940000157979	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00940000158865	ENSGT00940000158797	ENSGT00530000064194	ENSGT00990000204427	ENSGT00940000153294	ENSGT00390000004339	ENSGT00390000009787	ENSGT00940000158829
Atlantic herring	MODERN SPECIES	3	dnajc25 (ENSCHAG00000014357)	ENSCHAG00000014390	ythdc1 (ENSCHAG00000014422)	ENSCHAG00000014640	ENSCHAG00000014655	ENSCHAG00000014663	ENSCHAG00000014696	ENSCHAG00000015083	ENSCHAG00000015116	ENSCHAG00000015224	ENSCHAG00000015248	fktn (ENSCHAG00000015258)	FSD1L (ENSCHAG00000015366)	ift74 (ENSCHAG00000017362)	ENSCHAG00000017585	tek (ENSCHAG00000017643) #22	ENSCHAG00000019422 ##25	THAP1 (ENSCHAG00000019441)	june (ENSCHAG00000019450)	rnf170 (ENSCHAG00000019456)	HOOK3 (ENSCHAG00000019544)	TRABD2A (ENSCHAG00000021321)	dcc (ENSCHAG00000021384)	ENSCHAG00000022164	atp5fa1 (ENSCHAG00000022181)	prkaa1 (ENSCHAG00000022395)	kyat1 (ENSCHAG00000022602)	surf1 (ENSCHAG00000022743)	ENSCHAG00000022753	RPL7A (ENSCHAG00000022761)	med22 (ENSCHAG00000022804)
Denticle herring	MODERN SPECIES	13	dpm2 (ENSDCDG00000013887)	eeig1b (ENSDCDG00000013929)	slc25a25b (ENSDCDG00000014273)	MYL2 (ENSDCDG00000015660)	PPP1CA (ENSDCDG00000015674)	MCC (ENSDCDG00000015964)	rcl1 (ENSDCDG00000016019)	gng10 (ENSDCDG00000016045)	dnajc25 (ENSDCDG00000016048)	ythdc1 (ENSDCDG00000016066)	ENSDCDG00000016152	fktn (ENSDCDG00000016794)	FSD1L (ENSDCDG00000016901)	ift74 (ENSDCDG00000019851)	ENSDCDG00000019862	tek (ENSDCDG00000019924) #22	ENSDCDG00000020769 ##25	THAP1 (ENSDCDG00000020771)	june (ENSDCDG00000020772)	rnf170 (ENSDCDG00000020776)	HOOK3 (ENSDCDG00000020784)	TRABD2A (ENSDCDG00000020867)	dcc (ENSDCDG00000020965)	mbd2 (ENSDCDG00000023653)	prkaa1 (ENSDCDG00000023689)	kyat1 (ENSDCDG00000023763)	surf1 (ENSDCDG00000023772)	RPL7A (ENSDCDG00000023776)	zgc:103692 (ENSDCDG00000023789)	usp20 (ENSDCDG00000023804)	ptges (ENSDCDG00000023895)
Otophysi	ANCESTRAL SPECIES	14	ENSGT01030000234517.E.c	ENSGT00940000157272.h	ENSGT00940000155578.e.a.a.b	ENSGT00950000183252	ENSGT00940000153472.a.b	ENSGT00530000063974.b	ENSGT00530000063404.a	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000172372	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00390000014107.a.a	ENSGT00600000084860.B	ENSGT00940000162536	ENSGT00940000155826	ENSGT00390000004511.c.a.d	ENSGT00390000004524	ENSGT00530000064123.g	ENSGT00940000165981
Characiphysae	ANCESTRAL SPECIES	61	ENSGT00950000183252	ENSGT00940000153472.a.b	ENSGT00530000063974.b	ENSGT00530000063404.a	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000172372	ENSGT00390000007109	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00390000014107.a.a	ENSGT00940000162536	ENSGT00940000155826	ENSGT00390000004511.c.a.d	ENSGT00940000161616.c	ENSGT00940000156744.p	ENSGT00390000004524	ENSGT00530000064123.g	ENSGT00940000165981
Channel catfish	MODERN SPECIES	20	ENSIPUG00000018037	RCL1 (ENSIPUG00000018054)	gng10 (ENSIPUG00000018116)	dnajc25 (ENSIPUG00000018121)	ythdc1 (ENSIPUG00000018136)	ENSIPUG00000018178	ENSIPUG00000018192	ENSIPUG00000018200	ENSIPUG00000018221	ENSIPUG00000018242	ENSIPUG00000018275	FKTN (ENSIPUG00000018291)	fsd1l (ENSIPUG00000018320)	IFT74 (ENSIPUG00000018413)	lrrc19 (ENSIPUG00000018485)	tek (ENSIPUG00000018505) #22	mob3b (ENSIPUG00000018579) ##25	thap1 (ENSIPUG00000018596)	june (ENSIPUG00000018599)	rnf170 (ENSIPUG00000018604)	HOOK3 (ENSIPUG00000018629)	trabd2a (ENSIPUG00000018659)	dcc (ENSIPUG00000018675)	ENSIPUG00000018798	mbd2 (ENSIPUG00000018813)	rnf185 (ENSIPUG00000018828)	ENSIPUG00000018848	FASTKD5 (ENSIPUG00000018856)	LZTS3 (ENSIPUG00000018867)	DDRGK1 (ENSIPUG00000018878)	haus4 (ENSIPUG00000018895)
Characiphysae_b	ANCESTRAL SPECIES	78		ENSGT00940000155578.e.a.a.b	ENSGT00950000183252	ENSGT00940000153472.a.b	ENSGT00530000063974.b	ENSGT00530000063404.a	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212.bb.b.a	ENSGT00940000153212.bb.b.b	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000172372	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000161645.a	ENSGT00940000165000	ENSGT00940000160259.f	ENSGT00940000158867	ENSGT01030000234528.B.b.a.a.a.d.b.a	ENSGT00950000183005.a.b	ENSGT00390000014107.a.a	ENSGT00940000155826	ENSGT00390000004511.c.a.d	ENSGT00940000156744.p	ENSGT00390000004524
Characoidei	ANCESTRAL SPECIES	284																ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000161645.a	ENSGT00940000165000	ENSGT00940000158867	ENSGT01030000234528.B.b.a.a.a.d.b.a	ENSGT00940000163149.b.c.a.d	ENSGT00950000183005.a.b	ENSGT00390000014107.a.a	ENSGT00940000155826	ENSGT00390000004511.c.a.d
Red-bellied piranha	MODERN SPECIES	1653																tek (ENSPNAG00000026138) #22
Mexicana tetra	MODERN SPECIES	153																tek (ENSAMXG00000007111) #22	ENSAMXG00000035930 ##25	THAP1 (ENSAMXG00000029741)	june (ENSAMXG00000025986)	rnf170 (ENSAMXG00000036159)	HOOK3 (ENSAMXG00000014373)	trabd2a (ENSAMXG00000041427)	dcc (ENSAMXG00000014271)	CELA1 (ENSAMXG00000014225)	ENSAMXG00000030416	ENSAMXG00000036262	mbd2 (ENSAMXG00000042143)	rnf185 (ENSAMXG00000007798)	ENSAMXG00000041481	FASTKD5 (ENSAMXG00000025880)	LZTS3 (ENSAMXG00000041913)
Electric eel	MODERN SPECIES	316							ENSEEEG00000023014	ENSEEEG00000022952	ENSEEEG00000022629	ENSEEEG00000022525	ENSEEEG00000022354	fktn (ENSEEEG00000022324)	FSD1L (ENSEEEG00000022302)	ENSEEEG00000022299	ift74 (ENSEEEG00000022298)	tek (ENSEEEG00000022277) #22	ENSEEEG00000022274 ##25	THAP1 (ENSEEEG00000022273)	june (ENSEEEG00000022272)	rnf170 (ENSEEEG00000022271)	HOOK3 (ENSEEEG00000022265)	trabd2a (ENSEEEG00000022263)	ENSEEEG00000022262	ENSEEEG00000022261	ENSEEEG00000022260	ENSEEEG00000022259
Cyprinoidei	ANCESTRAL SPECIES	150														ENSGT00940000172372	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165922	ENSGT00940000159383	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00390000014107.a.a	ENSGT00600000084860.B	ENSGT00940000162536	ENSGT00940000155826	ENSGT00390000004524	ENSGT00530000064123.g	ENSGT00940000165981	ENSGT00390000001761
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	25														ENSGT00390000007109.m.a	ENSGT00940000164586.h.cb	ENSGT00940000158840.m.a #22	ENSGT00940000165922.a	ENSGT00940000172372	ENSGT00390000007109.n	ENSGT00940000158840.n #22	ENSGT01050000244898.a.a.a.a.y.a ##25	ENSGT00940000159383.a	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000165000.r	ENSGT00940000158867.b	ENSGT00950000183005.a.b.g.a.a	ENSGT00390000014107.a.a	ENSGT00600000084860.B.j	ENSGT00940000162536	ENSGT00940000155826
Cyprininae_a	ANCESTRAL SPECIES	271														ENSGT00390000007109.m.a	ENSGT00940000164586.h.cb	ENSGT00940000158840.m.a #22	ENSGT00940000165922.a	ENSGT00940000172372	ENSGT00390000007109.n	ENSGT00940000158840.n #22	ENSGT01050000244898.a.a.a.a.y.a ##25	ENSGT00940000159383.a	ENSGT00390000017123.b	ENSGT00940000158075.u	ENSGT00940000162805	ENSGT00940000165000.r	ENSGT00940000158867.b	ENSGT00950000183005.a.b.g.a.a	ENSGT00390000014107.a.a.m	ENSGT00600000084860.B.j.b	ENSGT00940000162536
Common carp reference	MODERN SPECIES	15														ENSCCRG00000032280	ENSCCRG00000060793	ENSCCRG00000034583 #22	ENSCCRG00000043696 ##25	ENSCCRG00000053352	THAP1 (ENSCCRG00000043697)	ENSCCRG00000071685	june (ENSCCRG00000065128)	rnf170 (ENSCCRG00000078108)	HOOK3 (ENSCCRG00000073009)	trabd2a (ENSCCRG00000077874)	dcc (ENSCCRG00000061718)	mbd2 (ENSCCRG00000044304)	rnf185 (ENSCCRG00000070622)	ENSCCRG00000075863	ENSCCRG00000043552	ENSCCRG00000065719	ENSCCRG00000043582
Goldfish	MODERN SPECIES	44	vkorc1l1 (ENSCARG00000002124)	GUSB (ENSCARG00000002063)	MTMR4 (ENSCARG00000001461)	ca4a (ENSCARG00000001357)	ENSCARG00000001354	GUSB (ENSCARG00000001264)	ASS1 (ENSCARG00000001145)	fubp3 (ENSCARG00000001061)	PRDM12 (ENSCARG00000001037)	hpda (ENSCARG00000000802)	ENSCARG00000000699	ENSCARG00000000695	ift74 (ENSCARG00000000470)	ENSCARG00000000380	ENSCARG00000000375	tek (ENSCARG00000000296) #22	ENSCARG00000000183	THAP1 (ENSCARG00000000168)	june (ENSCARG00000000164)	rnf170 (ENSCARG00000025930)	HOOK3 (ENSCARG00000025577)	ENSCARG00000025532	trabd2a (ENSCARG00000025519)	dcc (ENSCARG00000023546)	mbd2 (ENSCARG00000023457)	rnf185 (ENSCARG00000023443)	ENSCARG00000023438	YTHDC2 (ENSCARG00000023178)	PRDM12 (ENSCARG00000023161)	fubp3 (ENSCARG00000023105)	ASS1 (ENSCARG00000022979)
Cyprininae	ANCESTRAL SPECIES	997															ENSGT00390000007109.m.b	ENSGT00940000158840.m.b #22	ENSGT01050000244898.a.a.a.a.y.b ##25	ENSGT00940000159383.b	ENSGT00940000165922.b
Cyprininae_a	ANCESTRAL SPECIES	746															ENSGT00390000007109.m.b	ENSGT00940000158840.m.b #22	ENSGT01050000244898.a.a.a.a.y.b ##25	ENSGT00940000159383.b	ENSGT00940000165922.b
Common carp reference	MODERN SPECIES	7														ENSCCRG00000033911	ENSCCRG00000033890	ENSCCRG00000012802 #22	ENSCCRG00000047827 ##25	ENSCCRG00000081812	june (ENSCCRG00000057565)	ENSCCRG00000043727	trabd2a (ENSCCRG00000020551)	dcc (ENSCCRG00000055705)	ENSCCRG00000015014	ENSCCRG00000074481	ENSCCRG00000075164	ENSCCRG00000043734	PRDM12 (ENSCCRG00000069926)	ENSCCRG00000010926	ASS1 (ENSCCRG00000067520)	surf4 (ENSCCRG00000059365)	ENSCCRG00000035953
Cyprininae	ANCESTRAL SPECIES	25										ENSGT00390000007109.m.a	ENSGT00940000164586.h.cb	ENSGT00940000158840.m.a #22	ENSGT00940000165922.a	ENSGT00940000172372	ENSGT00390000007109.n	ENSGT00940000158840.n #22	ENSGT01050000244898.a.a.a.a.y.a ##25	ENSGT00940000159383.a	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000165000.r	ENSGT00940000158867.b	ENSGT00950000183005.a.b.g.a.a	ENSGT00390000014107.a.a	ENSGT00600000084860.B.j	ENSGT00940000162536	ENSGT00940000155826	ENSGT00940000161616.c.j.a.a	ENSGT00940000156744.p	ENSGT00390000004524.v	ENSGT00530000064123.g.a.a
Cyprininae_a	ANCESTRAL SPECIES	271										ENSGT00390000007109.m.a	ENSGT00940000164586.h.cb	ENSGT00940000158840.m.a #22	ENSGT00940000165922.a	ENSGT00940000172372	ENSGT00390000007109.n	ENSGT00940000158840.n #22	ENSGT01050000244898.a.a.a.a.y.a ##25	ENSGT00940000159383.a	ENSGT00390000017123.b	ENSGT00940000158075.u	ENSGT00940000162805	ENSGT00940000165000.r	ENSGT00940000158867.b	ENSGT00950000183005.a.b.g.a.a	ENSGT00390000014107.a.a.m	ENSGT00600000084860.B.j.b	ENSGT00940000162536	ENSGT00940000155826	ENSGT00990000210947	ENSGT00940000161616.c.j.a.b	ENSGT00940000156744.p
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	870										ENSSGRG00000050191	PTPRS (ENSSGRG00000045031)	ENSSGRG00000044893	PRKAB2 (ENSSGRG00000044889)	ENSSGRG00000044887	ift74 (ENSSGRG00000044815)	tek (ENSSGRG00000044509) #22	ENSSGRG00000044482 ##25	THAP1 (ENSSGRG00000044480)	june (ENSSGRG00000044479)
Golden-line barbel	MODERN SPECIES	629														ENSSGRG00000000632	ENSSGRG00000000635	tek (ENSSGRG00000000654) #22	ENSSGRG00000000659 ##25	THAP1 (ENSSGRG00000000660)	rnf170 (ENSSGRG00000000662)	HOOK3 (ENSSGRG00000000670)	TRABD2A (ENSSGRG00000000928)	dcc (ENSSGRG00000000929)	mbd2 (ENSSGRG00000000931)	rnf185 (ENSSGRG00000000932)	ENSSGRG00000000933	ENSSGRG00000000934	YTHDC2 (ENSSGRG00000000935)	ENSSGRG00000000936
Zebrafish	MODERN SPECIES	20									dcc (ENSDARG00000104282)	trabd2a (ENSDARG00000089701)	HOOK3 (ENSDARG00000114329)	rnf170 (ENSDARG00000104069)	june (ENSDARG00000104090)	thap1 (ENSDARG00000059020)	ift74 (ENSDARG00000023495)	tek (ENSDARG00000028663) #22	ENSDARG00000112702	ENSDARG00000089382	ENSDARG00000116751	fubp3 (ENSDARG00000086896)	mbd2 (ENSDARG00000075952)	rnf185 (ENSDARG00000032997)	ENSDARG00000102788	ENSDARG00000098889	ENSDARG00000115962	YTHDC2 (ENSDARG00000103525)	surf4 (ENSDARG00000104647)	surf2 (ENSDARG00000112476)	bbln (ENSDARG00000086753)	ENSDARG00000089781	dnm1a (ENSDARG00000010042)
Euteleosteomorpha	ANCESTRAL SPECIES	27	ENSGT00390000006366	ENSGT00390000013183.d.a.b	ENSGT00440000039527	ENSGT00940000156729	ENSGT01050000244924.a.a.a	ENSGT00390000012898	ENSGT01100000263525.a.a	ENSGT00390000013355	ENSGT00940000155803	ENSGT00940000153212	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000172372	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00390000001566	ENSGT00940000157449.a	ENSGT00940000167600	ENSGT00940000159129	ENSGT01050000245095	ENSGT00940000156170	ENSGT01030000234618.E
Protacanthopterygii	ANCESTRAL SPECIES	150												ENSGT00390000014471	ENSGT00940000157979	ENSGT00390000007109	ENSGT00940000161278	ENSGT00940000158840 #22	ENSGT00940000159383	ENSGT00940000165922	ENSGT00390000017123.b	ENSGT00940000158075	ENSGT00940000162805	ENSGT00940000158867	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00390000001566	ENSGT00940000157449.a	ENSGT00940000167600	ENSGT00940000159129	ENSGT00940000156170	ENSGT01030000234618.E	ENSGT00390000016258
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	848															ENSGT00940000172372.a	ENSGT00940000158840.o.a #22	ENSGT00940000159383	ENSGT00940000165922.d	ENSGT00390000017123.b.a.a	ENSGT00940000158075.w.b	ENSGT00940000162805	ENSGT00940000158075.x
Salmoninae_a	ANCESTRAL SPECIES	823															ENSGT00940000172372.a	ENSGT00940000158840.o.a #22
Salmo	ANCESTRAL SPECIES		ENSGT01050000244941.A.e	ENSGT00940000158571.j	ENSGT00940000158875.i	ENSGT00940000161837.c.a.b	ENSGT00950000183096.a.b.n	ENSGT00940000158994.h	ENSGT00390000006366.c.a	ENSGT01050000244924.a.a.a.n	ENSGT00390000012898.j	ENSGT00390000013355.z.a	ENSGT00940000155803.m	ENSGT00390000014471	ENSGT00940000157979.m.a.a	ENSGT00940000172372.b	ENSGT00940000172372.a	ENSGT00940000158840.o.a #22	ENSGT01050000244898.a.a.a.a.l.d ##25	ENSGT00940000159383	ENSGT00940000165922.d	ENSGT01100000264204	ENSGT00940000165000.b.b	ENSGT00940000158867.c	ENSGT00950000183005.a.b.e.b	ENSGT00390000001566.e	ENSGT00940000157449.a.b	ENSGT00940000167600.c	ENSGT00940000155047.bc	ENSGT00940000156170.m	ENSGT01030000234618.E.f.a.a	ENSGT00390000016258	ENSGT00950000183103.d.a.b
River trout	MODERN SPECIES	15	ENSSTUG00000018378	ENSSTUG00000018374	SLC46A2 (ENSSTUG00000018359)	ENSSTUG00000018355	snx30 (ENSSTUG00000018322)	inip (ENSSTUG00000018292)	ENSSTUG00000018278	ENSSTUG00000018245	ugcg (ENSSTUG00000018197)	dnajc25 (ENSSTUG00000018180)	ythdc1 (ENSSTUG00000018130)	fktn (ENSSTUG00000018097)	FSD1L (ENSSTUG00000017703)	ENSSTUG00000017683	ENSSTUG00000017677	tek (ENSSTUG00000017124) #22	ENSSTUG00000017094 ##25	THAP1 (ENSSTUG00000017086)	june (ENSSTUG00000017082)	rnf170 (ENSSTUG00000017067)	ENSSTUG00000017062	ENSSTUG00000017057	ENSSTUG00000017051	ENSSTUG00000017017	ENSSTUG00000017008	ENSSTUG00000016999	HOOK3 (ENSSTUG00000016248)	trabd2a (ENSSTUG00000016196)	dcc (ENSSTUG00000015492)	mbd2 (ENSSTUG00000015441)	ENSSTUG00000015412
Atlantic salmon	MODERN SPECIES		ENSSSAG00000095653	ENSSSAG00000048530	INIP (ENSSSAG00000048571)	ENSSSAG00000107356	ENSSSAG00000120306	PTBP3 (ENSSSAG00000089088)	ugcg (ENSSSAG00000048397)	dnajc25 (ENSSSAG00000093620)	ythdc1 (ENSSSAG00000048322)	ENSSSAG00000109365	ENSSSAG00000048226	ENSSSAG00000047931	ENSSSAG00000047884	ENSSSAG00000047876	ENSSSAG00000112644	ENSSSAG00000096369 #22	ENSSSAG00000098435 ##25	thap1 (ENSSSAG00000048517)	june (ENSSSAG00000109270)	ENSSSAG00000048507	ENSSSAG00000099488	rnf170 (ENSSSAG00000047265)	ENSSSAG00000089552	HOOK3 (ENSSSAG00000116617)	ENSSSAG00000071141	ENSSSAG00000086596	dcc (ENSSSAG00000071128)	ENSSSAG00000095626	ENSSSAG00000046684	RAB27B (ENSSSAG00000112970)	ENSSSAG00000101383
Huchen	MODERN SPECIES	7409														ENSHHUG00000001179	ENSHHUG00000001177	tek (ENSHHUG00000001111) #22
Salmoninae	ANCESTRAL SPECIES	374	ENSGT00390000006366.c.b	ENSGT00390000006366.d	ENSGT00440000039527.y.a.a	ENSGT00940000156729	ENSGT01050000244924.a.a.a.m	ENSGT00390000012898.i	ENSGT01100000263525.a.a	ENSGT00390000013355.z.b	ENSGT00940000155803	ENSGT00940000153212.v	ENSGT00390000014471	ENSGT00940000157979.m.b	ENSGT00940000161278	ENSGT00940000157979.n	ENSGT00390000007109	ENSGT00940000158840.o.b #22	ENSGT01050000244898.a.a.a.a.l ##25	ENSGT00940000165922.c	ENSGT00390000017123.b.a.b	ENSGT00940000158075.w.a	ENSGT00940000165000.b	ENSGT00940000158867.c	ENSGT00950000183005.a.b.e	ENSGT00390000001566.e	ENSGT00940000157449.a.b	ENSGT00940000167600.c
Salmoninae_a	ANCESTRAL SPECIES	123	ENSGT00940000161837.c.b.a.a.a	ENSGT00950000183096.a.b.m	ENSGT00940000158994.g	ENSGT00390000006366.c.b	ENSGT00390000006366.d	ENSGT00440000039527.y.a.a	ENSGT00940000156729	ENSGT01050000244924.a.a.a.m	ENSGT00390000012898.i	ENSGT01100000263525.a.a	ENSGT00390000013355.z.b	ENSGT00940000155803.n	ENSGT00940000153212.v	ENSGT00940000157979.n	ENSGT00390000007109	ENSGT00940000158840.o.b #22	ENSGT01050000244898.a.a.a.a.l ##25	ENSGT00940000165922.c	ENSGT00390000017123.b.a.b	ENSGT00940000158075.w.a	ENSGT00940000165000.b.a	ENSGT00940000158867.d	ENSGT00950000183005.a.b.f	ENSGT00390000008823	ENSGT00390000001566.f	ENSGT00940000157449.a.a	ENSGT00940000167600.d	ENSGT00940000159129.u.a	ENSGT00940000156170.n	ENSGT01030000234618.E.f.b
Salmo	ANCESTRAL SPECIES	106	ENSGT00940000161837.c.b.b	ENSGT00940000161837.c.b.a.a.a	ENSGT00950000183096.a.b.m	ENSGT00940000158994.g	ENSGT00390000006366.d	ENSGT00440000039527.y.a.a	ENSGT00940000156729	ENSGT01050000244924.a.a.a.m	ENSGT00390000012898.i	ENSGT01100000263525.a.a	ENSGT00390000013355.z.b	ENSGT00940000155803.n	ENSGT00940000153212.v	ENSGT00940000157979.n	ENSGT00390000007109	ENSGT00940000158840.o.b #22	ENSGT01050000244898.a.a.a.a.l.c ##25	ENSGT00940000165922.c	ENSGT00390000017123.b.a.a.b	ENSGT00390000017123.b.a.b	ENSGT00940000158075.w.a	ENSGT01100000265301	ENSGT00940000165000.b.a	ENSGT00940000158867.d	ENSGT00950000183005.a.b.f	ENSGT00390000008823	ENSGT00390000001566.f	ENSGT00940000157449.a.a	ENSGT00940000167600.d	ENSGT00940000159129.u.a	ENSGT00940000156170.n
River trout	MODERN SPECIES	6	snx30 (ENSSTUG00000015194)	ENSSTUG00000015224	inip (ENSSTUG00000015234)	ENSSTUG00000015250	ENSSTUG00000015258	hsdl2 (ENSSTUG00000015289)	PTBP3 (ENSSTUG00000015692)	ENSSTUG00000015704	ugcg (ENSSTUG00000015708)	gng10 (ENSSTUG00000015746)	dnajc25 (ENSSTUG00000015756)	ythdc1 (ENSSTUG00000015778)	ENSSTUG00000015859	ENSSTUG00000015932	ift74 (ENSSTUG00000017465)	tek (ENSSTUG00000018785) #22	ENSSTUG00000019495 ##25	june (ENSSTUG00000019511)	rnf170 (ENSSTUG00000019518)	HOOK3 (ENSSTUG00000019544)	trabd2a (ENSSTUG00000019691)	ENSSTUG00000019711	dcc (ENSSTUG00000019806)	ENSSTUG00000022031	ENSSTUG00000022043	mbd2 (ENSSTUG00000022049)	C18orf54 (ENSSTUG00000022070)	wdr91 (ENSSTUG00000022088)	ENSSTUG00000022319	RAB27B (ENSSTUG00000022328)	ENSSTUG00000022369
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000114711	ENSSSAG00000111506	ENSSSAG00000072559	inip (ENSSSAG00000104148)	ENSSSAG00000094998	hsdl2 (ENSSSAG00000072395)	PTBP3 (ENSSSAG00000083891)	ENSSSAG00000085833	ugcg (ENSSSAG00000094132)	ENSSSAG00000072124	dnajc25 (ENSSSAG00000072123)	ythdc1 (ENSSSAG00000072116)	ENSSSAG00000072115	ENSSSAG00000101802	ift74 (ENSSSAG00000071198)	ENSSSAG00000072071 #22	ENSSSAG00000087039 ##25	june (ENSSSAG00000072110)	rnf170 (ENSSSAG00000114922)	ENSSSAG00000071145	ENSSSAG00000108040	ENSSSAG00000085872	dcc (ENSSSAG00000095905)	ENSSSAG00000107541	cssa13h18orf54 (ENSSSAG00000071056)	ENSSSAG00000120444	wdr91 (ENSSSAG00000071071)	RAB27B (ENSSSAG00000046717)	ENSSSAG00000071032	ENSSSAG00000116476	TCF4 (ENSSSAG00000113835)
Oncorhynchus	ANCESTRAL SPECIES	47	ENSGT00940000161837.c.b.a.a.a	ENSGT00940000161837.c.a.a	ENSGT00950000183096.a.b.m	ENSGT00940000158994.g	ENSGT00390000006366.c.b	ENSGT00940000156729	ENSGT01050000244924.a.a.a.m	ENSGT00390000012898.i	ENSGT01100000263525.a.a	ENSGT00390000013355.z.b	ENSGT00940000155803.n	ENSGT00940000153212.v	ENSGT00940000157979.n	ENSGT00390000007109.o	ENSGT01000000221924	ENSGT00940000158840.o.b #22	ENSGT00940000161621.A.a.b.a	ENSGT01050000244898.a.a.a.a.l.b ##25	ENSGT00940000165922.c	ENSGT00390000017123.b.a.b	ENSGT00940000158075.w.a	ENSGT00940000165000.b.a	ENSGT00940000158867.d	ENSGT00390000008823	ENSGT00390000001566.f	ENSGT00940000157449.a.a	ENSGT00940000167600.d	ENSGT00940000159129.u.a	ENSGT00940000155047.bc	ENSGT00940000156170.m.b	ENSGT01030000234618.E.f.a.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	48	ENSGT00940000161837.c.b.a.a.a	ENSGT00940000161837.c.a.a	ENSGT00950000183096.a.b.m	ENSGT00940000158994.g	ENSGT00390000006366.c.b	ENSGT00940000156729	ENSGT01050000244924.a.a.a.m	ENSGT00390000012898.i	ENSGT01100000263525.a.a	ENSGT00390000013355.z.b	ENSGT00940000155803.n	ENSGT00940000153212.v	ENSGT00940000157979.n	ENSGT00390000007109.o	ENSGT01000000221924	ENSGT00940000158840.o.b #22	ENSGT00940000161621.A.a.b.a	ENSGT00940000165922.c	ENSGT00940000158075.w.a	ENSGT00940000165000.b.a	ENSGT00390000008823	ENSGT00390000001566.f	ENSGT00940000157449.a.a	ENSGT00940000167600.d	ENSGT00940000159129.u.a	ENSGT00940000158002.j	ENSGT00390000010767	ENSGT00940000156423.j.c	ENSGT00940000154827.db	ENSGT00950000183003.a.a.a.a.a.d	ENSGT00940000157778.q.b
Coho salmon	MODERN SPECIES	26	hsdl2 (ENSOKIG00005000646)	PTBP3 (ENSOKIG00005000702)	ENSOKIG00005000767	ugcg (ENSOKIG00005000780)	ENSOKIG00005000793	ENSOKIG00005000801	gng10 (ENSOKIG00005000805)	DNAJC25 (ENSOKIG00005000811)	ENSOKIG00005000816	ythdc1 (ENSOKIG00005000821)	ENSOKIG00005000836	ENSOKIG00005000838	FSD1L (ENSOKIG00005000898)	ift74 (ENSOKIG00005001104)	ENSOKIG00005001174	tek (ENSOKIG00005001210) #22	ENSOKIG00005001269	ENSOKIG00005001277 ##25	ENSOKIG00005001288	june (ENSOKIG00005001294)	ENSOKIG00005001297	ENSOKIG00005001301	ENSOKIG00005001309	rnf170 (ENSOKIG00005001322)	ENSOKIG00005001331	HOOK3 (ENSOKIG00005001355)	trabd2a (ENSOKIG00005001404)	ENSOKIG00005001412	dcc (ENSOKIG00005001452)	ENSOKIG00005001517	ENSOKIG00005001521
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005003097	ENSOTSG00005003093	ccni (ENSOTSG00005003088)	ccng2 (ENSOTSG00005003085)	ENSOTSG00005003080	ENSOTSG00005003075	ENSOTSG00005001699	NARS1 (ENSOTSG00005001341)	txnl1 (ENSOTSG00005001297)	txnl1 (ENSOTSG00005001118)	NARS1 (ENSOTSG00005000888)	fech (ENSOTSG00005000859)	TRABD2A (ENSOTSG00005000852)	ENSOTSG00005000843	ENSOTSG00005000839	ENSOTSG00005000835 #22	ENSOTSG00005000833	june (ENSOTSG00005000828)	ENSOTSG00005000826	ENSOTSG00005000778	ENSOTSG00005000770	ENSOTSG00005000757	ENSOTSG00005005516	ENSOTSG00005005396	ythdc1 (ENSOTSG00005005387)	dnajc25 (ENSOTSG00005005386)	gng10 (ENSOTSG00005005385)	ugcg (ENSOTSG00005005384)	ENSOTSG00005005382	ENSOTSG00005005364	galt (ENSOTSG00005005357)
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000006165	SLC46A2 (ENSOMYG00000006214)	SNX30 (ENSOMYG00000006238)	inip (ENSOMYG00000006724)	hsdl2 (ENSOMYG00000006840)	PTBP3 (ENSOMYG00000051681)	ENSOMYG00000056054	ugcg (ENSOMYG00000006360)	ENSOMYG00000049995	dnajc25 (ENSOMYG00000006438)	ythdc1 (ENSOMYG00000006532)	ENSOMYG00000006626	ENSOMYG00000006689	ENSOMYG00000007530	ENSOMYG00000030007	ENSOMYG00000007424 #22	ENSOMYG00000072032	ENSOMYG00000007219 ##25	june (ENSOMYG00000007194)	ENSOMYG00000062943	rnf170 (ENSOMYG00000052891)	ENSOMYG00000007097	ENSOMYG00000072936	ENSOMYG00000071646	ENSOMYG00000058946	ENSOMYG00000071207	trabd2a (ENSOMYG00000007566)	ENSOMYG00000060684	ENSOMYG00000061218	ENSOMYG00000061420	dcc (ENSOMYG00000007642)
Huchen	MODERN SPECIES	6032																ENSHHUG00000009139 #22	ENSHHUG00000009119	ENSHHUG00000009108 #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000158840.p #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	6032														ENSHHUG00000009139 #22	ENSHHUG00000009119	ENSHHUG00000009108 #22
Huchen	MODERN SPECIES	9453																ENSHHUG00000039372 #22
Northern pike	MODERN SPECIES	22	ENSELUG00000013814	ENSELUG00000029418	ENSELUG00000027293	hsdl2 (ENSELUG00000013870)	PTBP3 (ENSELUG00000013929)	ugcg (ENSELUG00000013975)	gng10 (ENSELUG00000013998)	dnajc25 (ENSELUG00000001397)	ythdc1 (ENSELUG00000014029)	ugt2a1 (ENSELUG00000014064)	fktn (ENSELUG00000014097)	ugt2a1 (ENSELUG00000014110)	FSD1L (ENSELUG00000014182)	ift74 (ENSELUG00000001548)	ENSELUG00000014205	tek (ENSELUG00000014402) #22	ENSELUG00000000523 ##25	THAP1 (ENSELUG00000000527)	june (ENSELUG00000014455)	rnf170 (ENSELUG00000027381)	HOOK3 (ENSELUG00000014549)	TRABD2A (ENSELUG00000014592)	ENSELUG00000014602	ENSELUG00000014639	ENSELUG00000032088	ENSELUG00000031865	ENSELUG00000014663	dcc (ENSELUG00000014722)	ENSELUG00000029650	wdr91 (ENSELUG00000014939)	C18orf54 (ENSELUG00000014771)
Osteoglossiformes	ANCESTRAL SPECIES	475													ENSGT00940000158075	ENSGT00390000017123.b	ENSGT00390000007109	ENSGT00940000158840 #22	ENSGT00940000165922	ENSGT00940000159383
P. kingsleyae	MODERN SPECIES	9	GFRA2 (ENSPKIG00000018311)	ENSPKIG00000018334	ENSPKIG00000018347	ENSPKIG00000018367	ENSPKIG00000018390	inip (ENSPKIG00000018405)	snx30 (ENSPKIG00000018432)	ythdc1 (ENSPKIG00000018497)	ENSPKIG00000018582	hsdl2 (ENSPKIG00000018620)	PTBP3 (ENSPKIG00000018677)	ENSPKIG00000018721	FSD1L (ENSPKIG00000018766)	fktn (ENSPKIG00000018834)	ift74 (ENSPKIG00000018861)	tek (ENSPKIG00000018914) #22	june (ENSPKIG00000018944)	THAP1 (ENSPKIG00000018957)	HOOK3 (ENSPKIG00000019014)	rnf170 (ENSPKIG00000019162)	UNC5C (ENSPKIG00000019220)	BMPR1B (ENSPKIG00000019296)	pdlim5b (ENSPKIG00000019339)	EGFLAM (ENSPKIG00000019380)	GDNF (ENSPKIG00000019413)	WDR70 (ENSPKIG00000019441)	ENSPKIG00000019502	ENSPKIG00000019519	nup155 (ENSPKIG00000019534)	nipbla (ENSPKIG00000019608)	slc1a3a (ENSPKIG00000019722)
Spotted gar	MODERN SPECIES	658	hsdl2 (ENSLOCG00000002917)	ENSLOCG00000002930	PTBP3 (ENSLOCG00000002942)	SUSD1 (ENSLOCG00000002960)	ugcg (ENSLOCG00000002974)	ENSLOCG00000003010	gng10 (ENSLOCG00000003023)	dnajc25 (ENSLOCG00000003035)	ythdc1 (ENSLOCG00000003045)	ugt2a1 (ENSLOCG00000003076)	tal2 (ENSLOCG00000017967)	fktn (ENSLOCG00000003089)	FSD1L (ENSLOCG00000003114)	ift74 (ENSLOCG00000003135)	LRRC19 (ENSLOCG00000003161)	tek (ENSLOCG00000003173) #22	zgc:152968 (ENSLOCG00000003194)	ENSLOCG00000003212 ##25	THAP1 (ENSLOCG00000003237)	june (ENSLOCG00000017968)	rnf170 (ENSLOCG00000003248)	HOOK3 (ENSLOCG00000003264)	TRABD2A (ENSLOCG00000003298)	dcc (ENSLOCG00000003319)	mbd2 (ENSLOCG00000003370)	poli (ENSLOCG00000003386)	STARD6 (ENSLOCG00000003412)	C18orf54 (ENSLOCG00000003429)	ENSLOCG00000003458	wdr91 (ENSLOCG00000003472)	RAB27B (ENSLOCG00000003498)
Reedfish	MODERN SPECIES	15	ENSECRG00000008645	myoz2b (ENSECRG00000008634)	SYNPO2 (ENSECRG00000008585)	ENSECRG00000009006	PALM2AKAP2 (ENSECRG00000008996)	PLPPR1 (ENSECRG00000008963)	GRIN3A (ENSECRG00000008936)	ENSECRG00000008923	ZNF462 (ENSECRG00000008911)	TMEM38B (ENSECRG00000008888)	tal2 (ENSECRG00000008880)	fktn (ENSECRG00000008871)	FSD1L (ENSECRG00000008854)	LRRC19 (ENSECRG00000008842)	IFT74 (ENSECRG00000008683)	TEK (ENSECRG00000008636) #22	ENSECRG00000008586	MOB3B (ENSECRG00000008569) #25	THAP1 (ENSECRG00000008562)	june (ENSECRG00000008557)	rnf170 (ENSECRG00000008551)	HOOK3 (ENSECRG00000008508)	TRABD2A (ENSECRG00000008488)	ENSECRG00000008477	hpse (ENSECRG00000008394)	HELQ (ENSECRG00000008340)	mrps18c (ENSECRG00000008321)	ENSECRG00000008308	abraxas1 (ENSECRG00000008293)	GPAT3 (ENSECRG00000008282)	cycsb (ENSECRG00000008271)
Elephant shark	MODERN SPECIES	1509	prrc1 (ENSCMIG00000007631)	megf10 (ENSCMIG00000007652)	C5orf63 (ENSCMIG00000007719)	anp32b (ENSCMIG00000007724)	ENSCMIG00000007726	ENSCMIG00000007730	ENSCMIG00000007733	TAL2 (ENSCMIG00000007739)	TMEM38B (ENSCMIG00000007741)	ZNF462 (ENSCMIG00000007746)	ENSCMIG00000007751	rad23b (ENSCMIG00000007756)	KLF4 (ENSCMIG00000007763)	IFT74 (ENSCMIG00000007797)	LRRC19 (ENSCMIG00000007854)	tek (ENSCMIG00000007863) #22	ENSCMIG00000007889	ENSCMIG00000007894	ENSCMIG00000007897	MOB3B (ENSCMIG00000007901) #25	zgc:100846 (ENSCMIG00000007907) #26	CCDC171 (ENSCMIG00000007916)	bnc2 (ENSCMIG00000007918)	CNTLN (ENSCMIG00000007920)	ENSCMIG00000007923	ENSCMIG00000007934	ENSCMIG00000007945	ADAMTSL1 (ENSCMIG00000007951)	ENSCMIG00000007955	ENSCMIG00000007958	ENSCMIG00000007960
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000158840 #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	1117								ENSEBUG00000016361	ENSEBUG00000007085	ENSEBUG00000013184	ENSEBUG00000001140	psmb3 (ENSEBUG00000016297)	PIP4K2A (ENSEBUG00000006885)	ENSEBUG00000008283	ENSEBUG00000013619 #22	ENSEBUG00000008960 #22	ENSEBUG00000011626	mknk1 (ENSEBUG00000015322)	mob3a (ENSEBUG00000015797) ##25	gcdhb (ENSEBUG00000009195)	tspan31 (ENSEBUG00000006024)	lsm12b (ENSEBUG00000016299)
Hagfish	MODERN SPECIES	1117									ENSEBUG00000016361	ENSEBUG00000007085	ENSEBUG00000013184	ENSEBUG00000001140	psmb3 (ENSEBUG00000016297)	PIP4K2A (ENSEBUG00000006885)	ENSEBUG00000008283	ENSEBUG00000013619 #22	ENSEBUG00000008960 #22	ENSEBUG00000011626	mknk1 (ENSEBUG00000015322)	mob3a (ENSEBUG00000015797) ##25	gcdhb (ENSEBUG00000009195)	tspan31 (ENSEBUG00000006024)	lsm12b (ENSEBUG00000016299)
Lamprey	MODERN SPECIES	87										pi4k2b (ENSPMAG00000003495)	nagk (ENSPMAG00000003469)	paip2b (ENSPMAG00000003460)	tlx1 (ENSPMAG00000003457)	xpo7 (ENSPMAG00000003417)	WDR54 (ENSPMAG00000003406)	ENSPMAG00000003400 #22