Rodentia ANCESTRAL SPECIES 5 ENSGT00940000156876.p ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319 #10 ENSGT00940000163004 #12 ENSGT00940000154685.b #7 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000163609 ENSGT00940000154904.b ENSGT00940000164557 ENSGT00940000156296 ENSGT00390000002109 ENSGT00940000156612 ENSGT00390000014577.a ENSGT00390000017736.a ENSGT00940000158731 ENSGT00940000161190 ENSGT00940000162534 ENSGT00800000124303 ENSGT00670000098076 ENSGT00940000160313 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00940000156876.p ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000163004 #12 ENSGT00940000154685.a ##7 ENSGT00940000155319 #10 ENSGT00940000154685.b #7 ENSGT00940000158779 #22 ENSGT00940000163775 #23 Myomorpha ANCESTRAL SPECIES 15 ENSGT00940000156876.p ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319 #10 ENSGT00940000163004 #12 ENSGT00940000154685.b #7 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 ENSGT00940000155180.b Muroidea ANCESTRAL SPECIES 24 ENSGT00940000156876.p ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000163004 #12 ENSGT00940000154685.b.g #7 ENSGT00940000155319 #10 ENSGT00940000154685.b.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000154951.v #32 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319.b.b #10 ENSGT00940000163004.g.b #12 ENSGT00940000154685.b.g #7 ENSGT00940000155319.b.a ##10 ENSGT00940000154685.b.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000154951.v #32 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319.b.b #10 ENSGT00940000163004.g.b #12 ENSGT00940000154685.b.g.c #7 ENSGT00940000154685.b.g.d.a #7 ENSGT00940000155319.b.a ##10 ENSGT00940000154685.b.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000154951.v #32 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000163004.g.a ##12 ENSGT00940000154685.b.g.d.b #7 ENSGT00940000155319.b.a ##10 ENSGT00940000154685.b.g.d.a #7 ENSGT00940000154685.b.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000154951.v #32 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Chinese hamster chok1gshd MODERN SPECIES 289 ENSCGRG00001017728 ENSCGRG00001010001 ##12 ENSCGRG00001009094 #7 ENSCGRG00001006855 #7 ENSCGRG00001005050 ENSCGRG00001003491 ##10 ENSCGRG00001000679 #21 ENSCGRG00001021253 #21 A2ml1 (ENSCGRG00001020052) #22 Pzp (ENSCGRG00001023080) #23 Fkbp4 (ENSCGRG00001021447) #24 Itfg2 (ENSCGRG00001020885) #25 Nrip2 (ENSCGRG00001017346) #26 Tex52 (ENSCGRG00001016648) #27 Foxm1 (ENSCGRG00001015604) #28 Rhno1 (ENSCGRG00001015196) #29 Tulp3 (ENSCGRG00001014654) #30 Tead4 (ENSCGRG00001014080) #31 ENSCGRG00001013919 #32 Tspan9 (ENSCGRG00001011101) Tspan11 (ENSCGRG00001010817) Prmt8 (ENSCGRG00001010178) Cracr2a (ENSCGRG00001008752) Parp11 (ENSCGRG00001022479) Golden Hamster MODERN SPECIES 779 ENSMAUG00000010187 #7 ENSMAUG00000001363 ##10 ENSMAUG00000014160 #7 ENSMAUG00000006000 ENSMAUG00000020578 ##12 ENSMAUG00000012956 ##10 ENSMAUG00000019339 #21 A2ml1 (ENSMAUG00000000613) #22 Pzp (ENSMAUG00000011490) #23 ENSMAUG00000008312 #24 Itfg2 (ENSMAUG00000009496) #25 Nrip2 (ENSMAUG00000021778) #26 Foxm1 (ENSMAUG00000002449) #28 Tulp3 (ENSMAUG00000002519) #30 ENSMAUG00000017829 Tspan9 (ENSMAUG00000016056) Tspan11 (ENSMAUG00000013785) Prmt8 (ENSMAUG00000008997) Cracr2a (ENSMAUG00000010171) Parp11 (ENSMAUG00000019478) ENSMAUG00000020887 Ccnd2 (ENSMAUG00000016865) Tigar (ENSMAUG00000011832) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319.b.b #10 ENSGT00940000163004.g.b #12 ENSGT00940000154685.b.g.c #7 ENSGT00940000155319.b.a.c.a ##10 ENSGT00940000154685.b.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 ENSGT00940000155180.b Prairie vole MODERN SPECIES 84 ENSMOCG00000000894 #21 A2ml1 (ENSMOCG00000021791) #22 Pzp (ENSMOCG00000000512) #23 Fkbp4 (ENSMOCG00000004045) #24 Itfg2 (ENSMOCG00000007429) #25 Nrip2 (ENSMOCG00000011387) #26 Tex52 (ENSMOCG00000019537) #27 Foxm1 (ENSMOCG00000022353) #28 Rhno1 (ENSMOCG00000013596) #29 Tulp3 (ENSMOCG00000005977) #30 Tead4 (ENSMOCG00000016979) #31 Tspan9 (ENSMOCG00000002692) Tspan11 (ENSMOCG00000008444) Prmt8 (ENSMOCG00000002303) Cracr2a (ENSMOCG00000016052) Parp11 (ENSMOCG00000019262) ENSMOCG00000015905 Northern American deer mouse MODERN SPECIES 16 Cd69 (ENSPEMG00000000355) ENSPEMG00000029657 ##7 ENSPEMG00000008426 #10 ENSPEMG00000028424 #12 ENSPEMG00000029105 #7 ENSPEMG00000008415 ##10 ENSPEMG00000016871 ##10 ENSPEMG00000023819 #7 ENSPEMG00000007211 ENSPEMG00000029433 ##10 ENSPEMG00000007026 ##10 ENSPEMG00000007931 #21 ENSPEMG00000027613 #21 ENSPEMG00000016832 #21 ENSPEMG00000029269 A2ml1 (ENSPEMG00000014330) #22 Pzp (ENSPEMG00000001470) #23 Fkbp4 (ENSPEMG00000018142) #24 Itfg2 (ENSPEMG00000007999) #25 Nrip2 (ENSPEMG00000028553) #26 Tex52 (ENSPEMG00000008805) #27 Foxm1 (ENSPEMG00000017790) #28 Rhno1 (ENSPEMG00000008275) #29 Tulp3 (ENSPEMG00000018388) #30 Tead4 (ENSPEMG00000015684) #31 Tspan9 (ENSPEMG00000025238) Tspan11 (ENSPEMG00000025349) Prmt8 (ENSPEMG00000015963) Cracr2a (ENSPEMG00000015307) Parp11 (ENSPEMG00000028145) ENSPEMG00000027566 Murinae ANCESTRAL SPECIES 4 ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000155319.b.a.b ##10 ENSGT00940000154685.b.g.f #8 ENSGT00940000163004.g.b #12 ENSGT00940000155319.b.b #10 ENSGT00940000154685.b.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000154951.v #32 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Mus ANCESTRAL SPECIES 12 ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000163004.g.b #12 ENSGT00940000155319.b.b #10 ENSGT00940000154685.b.h.g #21 ENSGT00940000155319.b.a.b ##10 ENSGT00940000154685.b.g.f #8 ENSGT00940000154685.b.g.e #7 ENSGT00940000155319.b.a.a ##10 ENSGT00940000154685.b.h.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000154951.v #32 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000155319.b.b #10 ENSGT00940000155319.b.a.b ##10 ENSGT00940000154685.b.g.f #8 ENSGT00940000163004.g.b #12 ENSGT00940000154685.b.g.e #7 ENSGT00940000155319.b.a.a ##10 ENSGT00940000154685.b.h.h #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 ENSGT00940000155180.b Mus_B ANCESTRAL SPECIES 15 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000164437 ENSGT00940000161987 ENSGT00940000155319.b.b.f #10 ENSGT00940000155319.b.a.b ##10 ENSGT00940000154685.b.g.f #8 ENSGT00860000135781 ENSGT00860000136096 ENSGT00940000155319.b.b.e.b #10 ENSGT00940000154685.b.h.g #21 ENSGT00940000154685.b.h.h.a #21 ENSGT00940000154685.b.g.e #7 ENSGT00940000155319.b.a.a ##10 ENSGT00940000154685.b.h.h.b #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 ENSGT00940000155180.b Mouse MODERN SPECIES 15 Clec2m (ENSMUSG00000047720) Cd69 (ENSMUSG00000030156) Clec2d (ENSMUSG00000030157) #10 Clec2e (ENSMUSG00000030155) ##10 Klrb1f (ENSMUSG00000030154) #8 Clec2f (ENSMUSG00000089728) #12 Clec2g (ENSMUSG00000000248) #10 Clec2i (ENSMUSG00000030365) #10 BC035044 (ENSMUSG00000090164) Klrb1b (ENSMUSG00000079298) #21 Gm44511 (ENSMUSG00000107872) Klrb1c (ENSMUSG00000030325) #21 Klrb1 (ENSMUSG00000079299) #7 Clec2h (ENSMUSG00000030364) ##10 Klrb1a (ENSMUSG00000030361) #21 A2ml1 (ENSMUSG00000047228) #22 Pzp (ENSMUSG00000030359) #23 Fkbp4 (ENSMUSG00000030357) #24 Itfg2 (ENSMUSG00000001518) #25 Nrip2 (ENSMUSG00000001520) #26 Gm44596 (ENSMUSG00000108011) Tex52 (ENSMUSG00000079304) #27 Foxm1 (ENSMUSG00000001517) #28 Rhno1 (ENSMUSG00000048668) #29 Tulp3 (ENSMUSG00000001521) #30 Tead4 (ENSMUSG00000030353) #31 Tspan9 (ENSMUSG00000030352) Tspan11 (ENSMUSG00000030351) Prmt8 (ENSMUSG00000030350) Cracr2a (ENSMUSG00000061414) Parp11 (ENSMUSG00000037997) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000154685.b.g.e #7 ENSGT00940000155319.b.a.a ##10 ENSGT00940000154685.b.h.h.b #21 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000157200 #24 ENSGT00390000005378 #25 ENSGT00950000182999.b.a.a #26 ENSGT00390000006066 #27 ENSGT00940000158804 #28 ENSGT00390000003219 #29 ENSGT00940000158155 #30 ENSGT00950000182956.b.b.a.b #31 ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 ENSGT00940000155180.b spretus MODERN SPECIES 15 Clec12a (MGP_SPRETEiJ_G0029971) Clec2m (MGP_SPRETEiJ_G0029970) Cd69 (MGP_SPRETEiJ_G0029969) Clec2d (MGP_SPRETEiJ_G0029968) #10 Clec2e (MGP_SPRETEiJ_G0029967) ##10 Klrb1f (MGP_SPRETEiJ_G0029966) #8 MGP_SPRETEiJ_G0029965 MGP_SPRETEiJ_G0029964 MGP_SPRETEiJ_G0029963 MGP_SPRETEiJ_G0029962 #21 MGP_SPRETEiJ_G0029961 #21 MGP_SPRETEiJ_G0029960 MGP_SPRETEiJ_G0029959 #21 Klrb1 (MGP_SPRETEiJ_G0029958) #7 Clec2h (MGP_SPRETEiJ_G0029957) ##10 A2ml1 (MGP_SPRETEiJ_G0029956) #22 Pzp (MGP_SPRETEiJ_G0029955) #23 Fkbp4 (MGP_SPRETEiJ_G0029954) #24 Itfg2 (MGP_SPRETEiJ_G0029953) #25 Nrip2 (MGP_SPRETEiJ_G0029952) #26 MGP_SPRETEiJ_G0029951 #26 Tex52 (MGP_SPRETEiJ_G0029950) #27 Foxm1 (MGP_SPRETEiJ_G0029949) #28 Rhno1 (MGP_SPRETEiJ_G0029948) #29 Tulp3 (MGP_SPRETEiJ_G0029947) #30 Tead4 (MGP_SPRETEiJ_G0029946) #31 MGP_SPRETEiJ_G0029945 Tspan11 (MGP_SPRETEiJ_G0029944) Prmt8 (MGP_SPRETEiJ_G0029943) MGP_SPRETEiJ_G0029942 Parp11 (MGP_SPRETEiJ_G0029941) Steppe mouse MODERN SPECIES 1984 Klrb1a (ENSMSIG00000000875) #21 A2ml1 (ENSMSIG00000000785) #22 Pzp (ENSMSIG00000000481) #23 Ryukyu mouse MODERN SPECIES 15 Clec12b (MGP_CAROLIEiJ_G0028928) Clec12a (MGP_CAROLIEiJ_G0028927) Clec2m (MGP_CAROLIEiJ_G0028926) Cd69 (MGP_CAROLIEiJ_G0028925) MGP_CAROLIEiJ_G0028924 #10 MGP_CAROLIEiJ_G0028923 ##10 Klrb1f (MGP_CAROLIEiJ_G0028921) #8 MGP_CAROLIEiJ_G0028920 MGP_CAROLIEiJ_G0028919 MGP_CAROLIEiJ_G0028918 #21 MGP_CAROLIEiJ_G0028917 #21 MGP_CAROLIEiJ_G0028916 #21 MGP_CAROLIEiJ_G0028915 #21 Klrb1 (MGP_CAROLIEiJ_G0028914) #7 Clec2h (MGP_CAROLIEiJ_G0028913) ##10 A2ml1 (MGP_CAROLIEiJ_G0028912) #22 Pzp (MGP_CAROLIEiJ_G0028911) #23 Fkbp4 (MGP_CAROLIEiJ_G0028910) #24 Itfg2 (MGP_CAROLIEiJ_G0028909) #25 MGP_CAROLIEiJ_G0028908 #26 MGP_CAROLIEiJ_G0028907 #26 Tex52 (MGP_CAROLIEiJ_G0028906) #27 Foxm1 (MGP_CAROLIEiJ_G0028905) #28 Rhno1 (MGP_CAROLIEiJ_G0028904) #29 Tulp3 (MGP_CAROLIEiJ_G0028903) #30 Tead4 (MGP_CAROLIEiJ_G0028902) #31 MGP_CAROLIEiJ_G0028901 Tspan11 (MGP_CAROLIEiJ_G0028900) Prmt8 (MGP_CAROLIEiJ_G0028899) MGP_CAROLIEiJ_G0028898 Parp11 (MGP_CAROLIEiJ_G0028897) Shrew mouse MODERN SPECIES 11 Clec12b (MGP_PahariEiJ_G0022691) Clec12a (MGP_PahariEiJ_G0022690) Clec2m (MGP_PahariEiJ_G0022689) Cd69 (MGP_PahariEiJ_G0022688) MGP_PahariEiJ_G0022687 #12 MGP_PahariEiJ_G0022686 #10 MGP_PahariEiJ_G0022685 ##10 Klrb1f (MGP_PahariEiJ_G0022684) #8 MGP_PahariEiJ_G0022683 #21 MGP_PahariEiJ_G0022682 #21 MGP_PahariEiJ_G0022681 #21 MGP_PahariEiJ_G0022680 #21 MGP_PahariEiJ_G0022679 Klrb1 (MGP_PahariEiJ_G0022678) #7 MGP_PahariEiJ_G0022677 ##10 A2ml1 (MGP_PahariEiJ_G0022676) #22 Pzp (MGP_PahariEiJ_G0022675) #23 Fkbp4 (MGP_PahariEiJ_G0022674) #24 Itfg2 (MGP_PahariEiJ_G0022673) #25 Nrip2 (MGP_PahariEiJ_G0022672) #26 MGP_PahariEiJ_G0022671 #26 Tex52 (MGP_PahariEiJ_G0022670) #27 Foxm1 (MGP_PahariEiJ_G0022669) #28 Rhno1 (MGP_PahariEiJ_G0022668) #29 Tulp3 (MGP_PahariEiJ_G0022667) #30 Tead4 (MGP_PahariEiJ_G0022666) #31 MGP_PahariEiJ_G0022665 #32 MGP_PahariEiJ_G0022664 #32 MGP_PahariEiJ_G0022663 #32 MGP_PahariEiJ_G0022662 Tspan11 (MGP_PahariEiJ_G0022661) Rat MODERN SPECIES 14 Klrb1 (ENSRNOG00000057410) #7 Klrb1c (ENSRNOG00000007811) #8 AABR07062138.1 (ENSRNOG00000030902) #9 LOC689800 (ENSRNOG00000055966) #10 AABR07062136.1 (ENSRNOG00000027063) #11 Clec2dl1 (ENSRNOG00000007866) #12 ENSRNOG00000070827 #13 ENSRNOG00000069899 #14 Clec2d (ENSRNOG00000048726) #15 LOC689770 (ENSRNOG00000069744) #16 LOC689757 (ENSRNOG00000037076) #17 Clec2d2 (ENSRNOG00000059890) #18 LOC500331 (ENSRNOG00000030522) #19 ENSRNOG00000069655 #20 Klrb1b (ENSRNOG00000007310) #21 A2ml1 (ENSRNOG00000007247) #22 Pzp (ENSRNOG00000006709) #23 Fkbp4 (ENSRNOG00000006444) #24 Itfg2 (ENSRNOG00000006264) #25 Nrip2 (ENSRNOG00000063347) #26 Tex52 (ENSRNOG00000062735) #27 Foxm1 (ENSRNOG00000005936) #28 Rhno1 (ENSRNOG00000028517) #29 Tulp3 (ENSRNOG00000005767) #30 Tead4 (ENSRNOG00000005608) #31 ENSRNOG00000066305 #32 ENSRNOG00000070785 #33 LOC120102398 (ENSRNOG00000066041) #34 LOC120102396 (ENSRNOG00000064456) #35 Senp2-ps1 (ENSRNOG00000063565) #36 Senp17 (ENSRNOG00000063804) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1885 ENSNGAG00000014312 A2ml1 (ENSNGAG00000014743) #22 Pzp (ENSNGAG00000015395) #23 Fkbp4 (ENSNGAG00000022914) #24 ENSNGAG00000021781 #25 Nrip2 (ENSNGAG00000016500) #26 Tex52 (ENSNGAG00000016547) #27 Foxm1 (ENSNGAG00000012562) #28 Rhno1 (ENSNGAG00000001201) #29 Tulp3 (ENSNGAG00000022420) #30 Tead4 (ENSNGAG00000020843) #31 ENSNGAG00000019477 #32 Tspan9 (ENSNGAG00000012759) Tspan11 (ENSNGAG00000018720) Prmt8 (ENSNGAG00000013585) Cracr2a (ENSNGAG00000014625) Parp11 (ENSNGAG00000022923) Lesser Egyptian jerboa MODERN SPECIES 158 Ybx3 (ENSJJAG00000014239) Styk1 (ENSJJAG00000013674) Magohb (ENSJJAG00000012649) Klrk1 (ENSJJAG00000010061) Gabarapl1 (ENSJJAG00000009776) ENSJJAG00000009617 ENSJJAG00000008025 ENSJJAG00000022331 Clec1a (ENSJJAG00000021912) Clec1b (ENSJJAG00000021385) Clec12b (ENSJJAG00000020444) Clec12a (ENSJJAG00000020037) Cd69 (ENSJJAG00000019735) ENSJJAG00000020857 #12 ENSJJAG00000020704 #7 A2ml1 (ENSJJAG00000019095) #22 Pzp (ENSJJAG00000018093) #23 Fkbp4 (ENSJJAG00000017584) #24 Itfg2 (ENSJJAG00000014749) #25 Nrip2 (ENSJJAG00000013874) #26 Tex52 (ENSJJAG00000013341) #27 Foxm1 (ENSJJAG00000012497) #28 ENSJJAG00000011643 #29 Tulp3 (ENSJJAG00000010696) #30 Tead4 (ENSJJAG00000016391) #31 Tspan9 (ENSJJAG00000015521) Tspan11 (ENSJJAG00000015132) Prmt8 (ENSJJAG00000014557) Cracr2a (ENSJJAG00000014186) Parp11 (ENSJJAG00000013220) Ccnd2 (ENSJJAG00000012694) Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000164373 ENSGT00940000156876.p ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319 #10 ENSGT00940000163004 #12 ENSGT00940000154685.b #7 ENSGT00940000158779 #22 ENSGT00940000163775 #23 ENSGT00940000163609 ENSGT00940000154904.b ENSGT00940000156296 ENSGT00390000002109 ENSGT00940000156612 ENSGT00390000014577.a ENSGT00390000017736.a ENSGT00940000158731 ENSGT00940000161190 ENSGT00940000162534 ENSGT00940000162491 ENSGT00940000161053 ENSGT01100000263564.b ENSGT00390000009359.a Hystricomorpha ANCESTRAL SPECIES 13 ENSGT00940000158621 ENSGT00940000162495 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000156605 ENSGT00940000157963 ENSGT00940000155987.b ENSGT00940000163606 ENSGT00940000160666 ENSGT00940000162400 ENSGT00940000162938 ENSGT00940000158835.o.a.b ENSGT00940000158835.o.a.a ENSGT00940000162719 ENSGT00940000161987 ENSGT00940000158779 #22 ENSGT00940000164557 ENSGT00940000154904.b ENSGT00940000156296 ENSGT00390000002109 ENSGT00940000156612 ENSGT00390000014577.a ENSGT00390000017736.a ENSGT00940000158731 ENSGT00940000161190 ENSGT00940000162534 ENSGT00940000162867 ENSGT00670000098076 ENSGT00940000160313.l ENSGT00940000161053 ENSGT01100000263564.b Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT01030000234564.b ENSGT00940000157473 ENSGT00940000158621 ENSGT00940000162495 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000156605 ENSGT00940000155987.b ENSGT00940000163606 ENSGT00940000160666 ENSGT00940000162400 ENSGT00940000158835.o.a.b ENSGT00940000158835.o.a.a ENSGT00940000162719 ENSGT00940000161987 ENSGT00940000158779 #22 ENSGT00940000164557 ENSGT00940000154904.b ENSGT00940000156296 ENSGT00390000002109 ENSGT00940000156612 ENSGT00390000014577.a ENSGT00390000017736.a ENSGT00940000158731 ENSGT00940000161190 ENSGT00940000162534 ENSGT00940000162867 ENSGT00670000098076 ENSGT00940000160313.l ENSGT00940000161053 ENSGT01100000263564.b Guinea pig MODERN SPECIES 28 ENSCPOG00000025441 ENSCPOG00000019503 ENSCPOG00000022838 CD163 (ENSCPOG00000005274) ENSCPOG00000027075 CLEC4E (ENSCPOG00000040588) ENSCPOG00000039097 ENSCPOG00000014272 ENSCPOG00000036567 CLEC12A (ENSCPOG00000031505) CD69 (ENSCPOG00000004961) ENSCPOG00000010987 #22 Mug1 (ENSCPOG00000026876) ENSCPOG00000032152 A2M (ENSCPOG00000000074) KLRG1 (ENSCPOG00000032778) M6PR (ENSCPOG00000007344) PHC1 (ENSCPOG00000007323) RIMKLB (ENSCPOG00000013756) ENSCPOG00000025468 ENSCPOG00000037838 ENSCPOG00000003074 APOBEC1 (ENSCPOG00000033068) ENSCPOG00000001939 ENSCPOG00000032695 ENSCPOG00000008888 ENSCPOG00000030440 Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT01030000234564.b ENSGT00940000157473 ENSGT00940000158621 ENSGT00940000162495 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000156605 ENSGT00940000155987.b ENSGT00940000163606 ENSGT00940000160666 ENSGT00940000162400 ENSGT00940000158835.o.a.b ENSGT00940000158835.o.a.a ENSGT00940000162719 ENSGT00940000161987 ENSGT00940000158779 #22 ENSGT00940000164557 ENSGT00940000154904.b ENSGT00940000156296 ENSGT00390000002109 ENSGT00940000156612 ENSGT00390000014577.a ENSGT00390000017736.a ENSGT00940000158731 ENSGT00940000161190 ENSGT00670000098076 ENSGT00940000160313.l ENSGT00940000161053 ENSGT01100000263564.b ENSGT00390000009359.a ENSGT00940000158835.n Degu MODERN SPECIES 329 ENSODEG00000001796 CD163 (ENSODEG00000001724) CLEC4E (ENSODEG00000001647) ENSODEG00000001614 ENSODEG00000001599 CD69 (ENSODEG00000002100) ENSODEG00000002073 ENSODEG00000001804 #22 ENSODEG00000001750 A2M (ENSODEG00000001603) KLRG1 (ENSODEG00000001549) ENSODEG00000001533 M6PR (ENSODEG00000001500) ENSODEG00000001480 ENSODEG00000000953 ENSODEG00000018638 ENSODEG00000000893 ENSODEG00000001561 MFAP5 (ENSODEG00000001438) AICDA (ENSODEG00000001235) ENSODEG00000001157 ENSODEG00000001117 ENSODEG00000001054 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 120 C1S (ENSCLAG00000015517) C1R (ENSCLAG00000015939) C1RL (ENSCLAG00000017098) RBP5 (ENSCLAG00000015079) CLSTN3 (ENSCLAG00000013125) PEX5 (ENSCLAG00000014902) CD163 (ENSCLAG00000016131) ENSCLAG00000014034 CLEC4E (ENSCLAG00000014802) CLEC4D (ENSCLAG00000015345) ENSCLAG00000014830 ENSCLAG00000016397 CLEC12A (ENSCLAG00000016917) CD69 (ENSCLAG00000016341) ENSCLAG00000014193 #22 ENSCLAG00000014477 #22 ENSCLAG00000015472 A2M (ENSCLAG00000014334) KLRG1 (ENSCLAG00000016032) M6PR (ENSCLAG00000016742) ENSCLAG00000015780 RIMKLB (ENSCLAG00000016207) MFAP5 (ENSCLAG00000015349) APOBEC1 (ENSCLAG00000014645) ENSCLAG00000016751 ENSCLAG00000014816 FOXJ2 (ENSCLAG00000015501) C3AR1 (ENSCLAG00000016345) NECAP1 (ENSCLAG00000016261) ENSCLAG00000016209 ENSCLAG00000014536 Long-tailed chinchilla MODERN SPECIES 120 LPCAT3 (ENSCLAG00000015685) C1S (ENSCLAG00000015517) C1R (ENSCLAG00000015939) C1RL (ENSCLAG00000017098) RBP5 (ENSCLAG00000015079) CLSTN3 (ENSCLAG00000013125) PEX5 (ENSCLAG00000014902) CD163 (ENSCLAG00000016131) ENSCLAG00000014034 CLEC4E (ENSCLAG00000014802) CLEC4D (ENSCLAG00000015345) ENSCLAG00000014830 ENSCLAG00000016397 CLEC12A (ENSCLAG00000016917) CD69 (ENSCLAG00000016341) ENSCLAG00000014193 #22 ENSCLAG00000014477 #22 ENSCLAG00000015472 A2M (ENSCLAG00000014334) KLRG1 (ENSCLAG00000016032) M6PR (ENSCLAG00000016742) ENSCLAG00000015780 RIMKLB (ENSCLAG00000016207) MFAP5 (ENSCLAG00000015349) APOBEC1 (ENSCLAG00000014645) ENSCLAG00000016751 ENSCLAG00000014816 FOXJ2 (ENSCLAG00000015501) C3AR1 (ENSCLAG00000016345) NECAP1 (ENSCLAG00000016261) ENSCLAG00000016209 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 24 C1RL (ENSHGLG00000042250) ENSHGLG00000001579 CLSTN3 (ENSHGLG00000001611) ENSHGLG00000035824 ENSHGLG00000001679 ENSHGLG00000037231 ENSHGLG00000001870 CLEC4D (ENSHGLG00000047579) ENSHGLG00000001945 CLEC4A (ENSHGLG00000000700) ENSHGLG00000000727 ENSHGLG00000050425 ENSHGLG00000031996 CD69 (ENSHGLG00000048187) ENSHGLG00000000782 #22 ENSHGLG00000041833 #22 ENSHGLG00000033007 ENSHGLG00000048432 A2m (ENSHGLG00000000871) ENSHGLG00000039615 ENSHGLG00000000946 ENSHGLG00000001045 ENSHGLG00000049427 ENSHGLG00000034712 RIMKLB (ENSHGLG00000001366) ENSHGLG00000037387 ENSHGLG00000001443 ENSHGLG00000001495 ENSHGLG00000035224 GDF3 (ENSHGLG00000035808) ENSHGLG00000037867 Naked mole-rat female MODERN SPECIES 24 C1R (ENSHGLG00000001453) C1RL (ENSHGLG00000042250) ENSHGLG00000001579 CLSTN3 (ENSHGLG00000001611) ENSHGLG00000035824 ENSHGLG00000001679 ENSHGLG00000037231 ENSHGLG00000001870 CLEC4D (ENSHGLG00000047579) ENSHGLG00000001945 CLEC4A (ENSHGLG00000000700) ENSHGLG00000000727 ENSHGLG00000050425 ENSHGLG00000031996 CD69 (ENSHGLG00000048187) ENSHGLG00000000782 #22 ENSHGLG00000041833 #22 ENSHGLG00000033007 ENSHGLG00000048432 A2m (ENSHGLG00000000871) ENSHGLG00000039615 ENSHGLG00000000946 ENSHGLG00000001045 ENSHGLG00000049427 ENSHGLG00000034712 RIMKLB (ENSHGLG00000001366) ENSHGLG00000037387 ENSHGLG00000001443 ENSHGLG00000001495 ENSHGLG00000035224 GDF3 (ENSHGLG00000035808) Sciuridae ANCESTRAL SPECIES 83 ENSGT00940000163004 #12 ENSGT00940000158779 #22 ENSGT00940000163775 #23 Eurasian red squirrel MODERN SPECIES 14 TAS2R8 (ENSSVLG00005003583) ENSSVLG00005003595 TAS2R10 (ENSSVLG00005003619) TAS2R13 (ENSSVLG00005003632) ENSSVLG00005003663 ENSSVLG00005003678 ENSSVLG00005003690 ENSSVLG00005010818 ENSSVLG00005010885 ENSSVLG00005010915 SMIM10L1 (ENSSVLG00005010988) TAS2R42 (ENSSVLG00005011003) ENSSVLG00005011024 ENSSVLG00005011042 #12 ENSSVLG00005011107 ENSSVLG00005011182 #22 ENSSVLG00005011362 #23 ENSSVLG00005013102 ETV6 (ENSSVLG00005013207) BCL2L14 (ENSSVLG00005013351) ENSSVLG00005013557 MANSC1 (ENSSVLG00005013792) BORCS5 (ENSSVLG00005013968) ENSSVLG00005014092 DUSP16 (ENSSVLG00005014160) ENSSVLG00005014288 CREBL2 (ENSSVLG00005014339) GPR19 (ENSSVLG00005014376) CDKN1B (ENSSVLG00005014387) APOLD1 (ENSSVLG00005014427) DDX47 (ENSSVLG00005014476) Marmotini ANCESTRAL SPECIES 95 ENSGT00940000164373 ENSGT00940000156876.p ENSGT00730000111328 ENSGT00940000161941 ENSGT00940000161161.b ENSGT00940000161945 ENSGT00940000161796 ENSGT00940000162140 ENSGT00940000162751 ENSGT00940000162719 ENSGT00940000161987 ENSGT00940000154685.a ##7 ENSGT00940000155319 #10 ENSGT00940000154685.b.f #7 ENSGT00940000154685.b.e.a #7 ENSGT00940000158779 #22 ENSGT00940000163775 #23 Alpin marmot MODERN SPECIES 146 CLEC12B (ENSMMMG00000022353) CLEC12A (ENSMMMG00000022345) ENSMMMG00000022343 CD69 (ENSMMMG00000022336) ENSMMMG00000022333 ##7 ENSMMMG00000022318 #10 ENSMMMG00000022306 #7 ENSMMMG00000022305 ENSMMMG00000022297 #7 ENSMMMG00000022295 ENSMMMG00000022288 #22 ENSMMMG00000022283 ENSMMMG00000022268 #23 Marmotini_b ANCESTRAL SPECIES 331 ENSGT00940000154685.b.e.a #7 ENSGT00940000158779 #22 ENSGT00940000163775 #23 Squirrel MODERN SPECIES 570 ENSSTOG00000022781 #12 ENSSTOG00000000066 #22 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 776 ENSUPAG00010004641 #7 ENSUPAG00010004650 #22 ENSUPAG00010004766 #22 ENSUPAG00010004776 #23 Arctic ground squirrel MODERN SPECIES 776 ENSUPAG00010004641 #7 ENSUPAG00010004650 #22 ENSUPAG00010004766 #22 ENSUPAG00010004776 #23