Vertebrata ANCESTRAL SPECIES ENSGT00940000161798 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000161798 #22 Euteleostomi ANCESTRAL SPECIES 504 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00950000183180.a.b #30 ENSGT00940000158438 #31 Sarcopterygii ANCESTRAL SPECIES 699 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00940000157807 ENSGT00940000166600 Tetrapoda ANCESTRAL SPECIES 167 ENSGT00940000155431.b ENSGT00940000157293 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.d ##21 ENSGT00390000012691.c.b ##21 ENSGT00390000008815 #20 ENSGT00940000159023 Amniota ANCESTRAL SPECIES 74 ENSGT00940000162408 #32 ENSGT00940000158438 #31 ENSGT00390000017030.b.b ENSGT00950000183180.a.b #30 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00940000161403 #25 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000012691.d ##21 ENSGT00390000007075 #23 ENSGT00390000012691.c.a #21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 ENSGT00940000160668 #18 ENSGT00940000160076 #17 ENSGT00940000159208.B #16 ENSGT00940000159762 #15 ENSGT00950000183127.b ENSGT00940000160997 ENSGT00940000155371 ENSGT00940000161847 ENSGT00940000153385.b.a.b ENSGT00940000161157 Mammalia ANCESTRAL SPECIES 89 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00980000198488.n ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000154022.b ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 Theria ANCESTRAL SPECIES 4 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00980000198488.n ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000164565 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Eutheria ANCESTRAL SPECIES 9 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000164565 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Glires ANCESTRAL SPECIES 5 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Lagomorpha ANCESTRAL SPECIES 2 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Pika MODERN SPECIES 3164 HLA-DPB1 (ENSOPRG00000000830) #13 ENSOPRG00000000840 #14 COL11A2 (ENSOPRG00000000846) #15 RXRB (ENSOPRG00000000905) #16 SLC39A7 (ENSOPRG00000000914) #17 HSD17B8 (ENSOPRG00000000920) #18 RING1 (ENSOPRG00000000924) #19 VPS52 (ENSOPRG00000000932) #20 ENSOPRG00000000957 #21 B3GALT4 (ENSOPRG00000000967) #22 WDR46 (ENSOPRG00000000968) #23 ENSOPRG00000000983 #24 RGL2 (ENSOPRG00000000989) #25 TAPBP (ENSOPRG00000001010) #26 ENSOPRG00000001026 #27 DAXX (ENSOPRG00000001051) #28 KIFC1 (ENSOPRG00000001063) #29 PHF1 (ENSOPRG00000001082) #30 SYNGAP1 (ENSOPRG00000001098) #31 ZBTB9 (ENSOPRG00000019142) #32 ENSOPRG00000001127 #33 Rabbit MODERN SPECIES 3 TAP2 (ENSOCUG00000002489) PSMB8 (ENSOCUG00000002131) TAP1 (ENSOCUG00000002135) ENSOCUG00000002139 HLA-DMB (ENSOCUG00000026567) HLA-DMA (ENSOCUG00000022573) BRD2 (ENSOCUG00000003097) ENSOCUG00000003319 HLA-DPB1 (ENSOCUG00000008721) #13 COL11A2 (ENSOCUG00000016497) #15 RXRB (ENSOCUG00000011590) #16 SLC39A7 (ENSOCUG00000011598) #17 HSD17B8 (ENSOCUG00000020995) #18 VPS52 (ENSOCUG00000010533) #20 ENSOCUG00000010546 ##21 B3GALT4 (ENSOCUG00000010550) #22 ENSOCUG00000010554 #23 PFDN6 (ENSOCUG00000010559) #24 RGL2 (ENSOCUG00000026930) #25 TAPBP (ENSOCUG00000010563) #26 DAXX (ENSOCUG00000010574) #28 SMIM40 (ENSOCUG00000037016) KIFC1 (ENSOCUG00000010708) #29 PHF1 (ENSOCUG00000013680) #30 CUTA (ENSOCUG00000025968) SYNGAP1 (ENSOCUG00000001039) #31 ZBTB9 (ENSOCUG00000025266) #32 BAK1 (ENSOCUG00000002556) #33 ITPR3 (ENSOCUG00000005766) UQCC2 (ENSOCUG00000005802) IP6K3 (ENSOCUG00000029364) Rodentia ANCESTRAL SPECIES 6 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Rodentia_B ANCESTRAL SPECIES 8 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Myomorpha ANCESTRAL SPECIES 11 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Muroidea ANCESTRAL SPECIES 15 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Cricetidae ANCESTRAL SPECIES 9 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00980000198488.m.a.b.a.b.a.a.a.f.a.b.b.b ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00980000198488.m.a.b.a.b.a.a.a.f.a.b.b.a ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Prairie vole MODERN SPECIES 352 Tap1 (ENSMOCG00000019762) Psmb9 (ENSMOCG00000005369) ENSMOCG00000022309 H2-DMa (ENSMOCG00000002744) Brd2 (ENSMOCG00000016368) H2-Oa (ENSMOCG00000020236) ENSMOCG00000010963 #14 Col11a2 (ENSMOCG00000016852) #15 Rxrb (ENSMOCG00000000374) #16 Slc39a7 (ENSMOCG00000019993) #17 Hsd17b8 (ENSMOCG00000001695) #18 Ring1 (ENSMOCG00000020973) #19 ENSMOCG00000014473 Vps52 (ENSMOCG00000004229) #20 Rps18 (ENSMOCG00000018024) ##21 B3galt4 (ENSMOCG00000011979) #22 Wdr46 (ENSMOCG00000014412) #23 Pfdn6 (ENSMOCG00000022424) #24 Rgl2 (ENSMOCG00000022698) #25 Tapbp (ENSMOCG00000010072) #26 Daxx (ENSMOCG00000007154) #28 ENSMOCG00000001648 #29 Phf1 (ENSMOCG00000015733) #30 Cuta (ENSMOCG00000022966) Syngap1 (ENSMOCG00000021904) #31 Zbtb9 (ENSMOCG00000018315) #32 Bak1 (ENSMOCG00000018013) #33 Ggnbp1 (ENSMOCG00000002798) Itpr3 (ENSMOCG00000017037) Uqcc2 (ENSMOCG00000020094) Ip6k3 (ENSMOCG00000017166) Northern American deer mouse MODERN SPECIES 13 ENSPEMG00000018040 H2-DMa (ENSPEMG00000013203) Brd2 (ENSPEMG00000018138) H2-Oa (ENSPEMG00000011158) ENSPEMG00000015442 #14 ENSPEMG00000026148 #13 Col11a2 (ENSPEMG00000016918) #15 Rxrb (ENSPEMG00000018454) #16 Slc39a7 (ENSPEMG00000003403) #17 Hsd17b8 (ENSPEMG00000012925) #18 Ring1 (ENSPEMG00000019238) #19 ENSPEMG00000024622 ENSPEMG00000030975 ENSPEMG00000030319 Rps18 (ENSPEMG00000005058) ##21 B3galt4 (ENSPEMG00000004762) #22 Wdr46 (ENSPEMG00000019179) #23 Pfdn6 (ENSPEMG00000005228) #24 Rgl2 (ENSPEMG00000018722) #25 Tapbp (ENSPEMG00000011953) #26 Zbtb22 (ENSPEMG00000019021) #27 Daxx (ENSPEMG00000009347) #28 ENSPEMG00000030934 ENSPEMG00000005677 #29 Phf1 (ENSPEMG00000008040) #30 Cuta (ENSPEMG00000015912) Syngap1 (ENSPEMG00000016655) #31 Zbtb9 (ENSPEMG00000005547) #32 Bak1 (ENSPEMG00000026995) #33 Ggnbp1 (ENSPEMG00000017027) Itpr3 (ENSPEMG00000010465) Cricetinae ANCESTRAL SPECIES 24 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000164565 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Chinese hamster chok1gshd MODERN SPECIES 303 ENSCGRG00001017919 Ltb (ENSCGRG00001019732) Tnf (ENSCGRG00001022485) Lta (ENSCGRG00001000368) Nfkbil1 (ENSCGRG00001005644) Atp6v1g2 (ENSCGRG00001015820) Ddx39b (ENSCGRG00001017315) ENSCGRG00001018670 ENSCGRG00001021916 ENSCGRG00001005422 ENSCGRG00001013481 ENSCGRG00001015089 ENSCGRG00001022861 Vps52 (ENSCGRG00001014839) #20 ENSCGRG00001000148 ##21 B3galt4 (ENSCGRG00001016128) #22 Wdr46 (ENSCGRG00001019497) #23 Pfdn6 (ENSCGRG00001001849) #24 Rgl2 (ENSCGRG00001005003) #25 Tapbp (ENSCGRG00001019225) #26 Zbtb22 (ENSCGRG00001020183) #27 Daxx (ENSCGRG00001007861) #28 ENSCGRG00001012172 Cuta (ENSCGRG00001018695) Phf1 (ENSCGRG00001019832) #30 Syngap1 (ENSCGRG00001017977) #31 Zbtb9 (ENSCGRG00001012006) #32 Bak1 (ENSCGRG00001012370) #33 Ggnbp1 (ENSCGRG00001015484) Itpr3 (ENSCGRG00001002765) Uqcc2 (ENSCGRG00001023447) Golden Hamster MODERN SPECIES 794 Vps52 (ENSMAUG00000014379) #20 ENSMAUG00000000317 ##21 B3galt4 (ENSMAUG00000021924) #22 Wdr46 (ENSMAUG00000000911) #23 Pfdn6 (ENSMAUG00000014806) #24 ENSMAUG00000017617 ENSMAUG00000007762 #25 Tapbp (ENSMAUG00000005999) #26 Zbtb22 (ENSMAUG00000014068) #27 ENSMAUG00000019318 ENSMAUG00000021378 Phf1 (ENSMAUG00000002043) #30 Cuta (ENSMAUG00000016276) Syngap1 (ENSMAUG00000021307) #31 Zbtb9 (ENSMAUG00000014578) #32 Bak1 (ENSMAUG00000018236) #33 Ggnbp1 (ENSMAUG00000020283) Itpr3 (ENSMAUG00000019945) Murinae ANCESTRAL SPECIES 18 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Mus ANCESTRAL SPECIES 16 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00980000198488.m.a.b.a.b.a.a.a.c ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00730000111436 ENSGT00390000006553 ENSGT00910000144227.s.a.h.k ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000161659 ENSGT00940000158995 ENSGT00940000154595.n Mus_A ANCESTRAL SPECIES 10 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381.h ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.b.b.a.a.a ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735.l #29 ENSGT00730000111436 ENSGT00390000006553 ENSGT00910000144227.s.a.h.k ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000161659 ENSGT00940000158995 Mus_B ANCESTRAL SPECIES 9 ENSGT00940000159897 ENSGT00940000160381.h ENSGT00940000160381.g ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.b.b.a.a.a ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.`b #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735.l #29 ENSGT00730000111436 ENSGT00390000006553 ENSGT00910000144227.s.a.h.k ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000161659 ENSGT00940000158995 Mouse MODERN SPECIES 8 Tap1 (ENSMUSG00000037321) Psmb9 (ENSMUSG00000096727) H2-DMb1 (ENSMUSG00000079547) H2-DMb2 (ENSMUSG00000037548) H2-DMa (ENSMUSG00000037649) Brd2 (ENSMUSG00000024335) H2-Oa (ENSMUSG00000024334) Col11a2 (ENSMUSG00000024330) #15 Rxrb (ENSMUSG00000039656) #16 Slc39a7 (ENSMUSG00000024327) #17 Hsd17b8 (ENSMUSG00000073422) #18 Ring1 (ENSMUSG00000024325) #19 H2-K1 (ENSMUSG00000061232) Vps52 (ENSMUSG00000024319) #20 Rps18 (ENSMUSG00000008668) ##21 B3galt4 (ENSMUSG00000067370) #22 Wdr46 (ENSMUSG00000024312) #23 Pfdn6 (ENSMUSG00000024309) #24 Rgl2 (ENSMUSG00000041354) #25 Zbtb22 (ENSMUSG00000051390) #27 Tapbp (ENSMUSG00000024308) #26 Daxx (ENSMUSG00000002307) #28 Smim40 (ENSMUSG00000092349) Kifc1 (ENSMUSG00000079553) #29 Smim40-ps (ENSMUSG00000115113) Cd320 (ENSMUSG00000002308) Ndufa7 (ENSMUSG00000041881) Rps28 (ENSMUSG00000067288) Kank3 (ENSMUSG00000042099) Angptl4 (ENSMUSG00000002289) Rab11b (ENSMUSG00000077450) Mus_C ANCESTRAL SPECIES 9 ENSGT00940000159897 ENSGT00940000160381.h ENSGT00940000160381.g ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.a ENSGT00390000008815 #20 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.`b #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00730000111436 ENSGT00390000006553 ENSGT00910000144227.s.a.h.k ENSGT00940000161178 ENSGT00940000159478 ENSGT00940000161659 ENSGT00940000158995 ENSGT00940000154595.n Steppe mouse MODERN SPECIES 2564 Psmb9 (ENSMSIG00000011042) H2-DMb1 (ENSMSIG00000011055) H2-DMa (ENSMSIG00000011088) Brd2 (ENSMSIG00000011118) H2-Oa (ENSMSIG00000011198) ENSMSIG00000011214 #14 Col11a2 (ENSMSIG00000011347) #15 Rxrb (ENSMSIG00000012091) #16 Slc39a7 (ENSMSIG00000012137) #17 ENSMSIG00000012153 #18 Ring1 (ENSMSIG00000012190) #19 ENSMSIG00000012243 ENSMSIG00000012249 Vps52 (ENSMSIG00000012295) #20 Rps18 (ENSMSIG00000012382) ##21 B3galt4 (ENSMSIG00000012406) #22 Wdr46 (ENSMSIG00000012419) #23 Pfdn6 (ENSMSIG00000012469) #24 Rgl2 (ENSMSIG00000012505) #25 Tapbp (ENSMSIG00000012535) #26 Zbtb22 (ENSMSIG00000012547) #27 Daxx (ENSMSIG00000012554) #28 ENSMSIG00000012579 spretus MODERN SPECIES 8 Tap2 (MGP_SPRETEiJ_G0022355) Psmb8 (MGP_SPRETEiJ_G0022354) Tap1 (MGP_SPRETEiJ_G0022353) Psmb9 (MGP_SPRETEiJ_G0022352) H2-DMb2 (MGP_SPRETEiJ_G0022351) MGP_SPRETEiJ_G0022350 H2-DMa (MGP_SPRETEiJ_G0022349) Brd2 (MGP_SPRETEiJ_G0022348) H2-Oa (MGP_SPRETEiJ_G0022347) Col11a2 (MGP_SPRETEiJ_G0022346) #15 Rxrb (MGP_SPRETEiJ_G0022345) #16 Slc39a7 (MGP_SPRETEiJ_G0022344) #17 Hsd17b8 (MGP_SPRETEiJ_G0022343) #18 Ring1 (MGP_SPRETEiJ_G0022342) #19 MGP_SPRETEiJ_G0022340 ##21 B3galt4 (MGP_SPRETEiJ_G0022339) #22 Wdr46 (MGP_SPRETEiJ_G0022338) #23 Pfdn6 (MGP_SPRETEiJ_G0022337) #24 Rgl2 (MGP_SPRETEiJ_G0022336) #25 Zbtb22 (MGP_SPRETEiJ_G0022335) #27 Tapbp (MGP_SPRETEiJ_G0022334) #26 Daxx (MGP_SPRETEiJ_G0022333) #28 Cd320 (MGP_SPRETEiJ_G0022332) Ndufa7 (MGP_SPRETEiJ_G0022331) Rps28 (MGP_SPRETEiJ_G0022330) Kank3 (MGP_SPRETEiJ_G0022329) Angptl4 (MGP_SPRETEiJ_G0022328) Rab11b (MGP_SPRETEiJ_G0022327) Marchf2 (MGP_SPRETEiJ_G0022326) Hnrnpm (MGP_SPRETEiJ_G0022325) Pram1 (MGP_SPRETEiJ_G0022324) Ryukyu mouse MODERN SPECIES 8 H2-DMa (MGP_CAROLIEiJ_G0021443) Brd2 (MGP_CAROLIEiJ_G0021442) H2-Oa (MGP_CAROLIEiJ_G0021441) Col11a2 (MGP_CAROLIEiJ_G0021440) #15 Rxrb (MGP_CAROLIEiJ_G0021439) #16 Slc39a7 (MGP_CAROLIEiJ_G0021438) #17 Hsd17b8 (MGP_CAROLIEiJ_G0021437) #18 Ring1 (MGP_CAROLIEiJ_G0021436) #19 MGP_CAROLIEiJ_G0021435 MGP_CAROLIEiJ_G0021434 MGP_CAROLIEiJ_G0021432 MGP_CAROLIEiJ_G0021431 MGP_CAROLIEiJ_G0021430 MGP_CAROLIEiJ_G0021429 Rps18 (MGP_CAROLIEiJ_G0021428) ##21 B3galt4 (MGP_CAROLIEiJ_G0021427) #22 Wdr46 (MGP_CAROLIEiJ_G0021426) #23 Pfdn6 (MGP_CAROLIEiJ_G0021425) #24 Rgl2 (MGP_CAROLIEiJ_G0021424) #25 Zbtb22 (MGP_CAROLIEiJ_G0021423) #27 Tapbp (MGP_CAROLIEiJ_G0021422) #26 Daxx (MGP_CAROLIEiJ_G0021421) #28 Cd320 (MGP_CAROLIEiJ_G0021420) Ndufa7 (MGP_CAROLIEiJ_G0021419) Rps28 (MGP_CAROLIEiJ_G0021418) Kank3 (MGP_CAROLIEiJ_G0021417) Angptl4 (MGP_CAROLIEiJ_G0021416) Rab11b (MGP_CAROLIEiJ_G0021415) Marchf2 (MGP_CAROLIEiJ_G0021414) Hnrnpm (MGP_CAROLIEiJ_G0021413) Pram1 (MGP_CAROLIEiJ_G0021412) Shrew mouse MODERN SPECIES 9 H2-Ob (MGP_PahariEiJ_G0020447) MGP_PahariEiJ_G0020446 Tap2 (MGP_PahariEiJ_G0020445) Psmb8 (MGP_PahariEiJ_G0020444) Tap1 (MGP_PahariEiJ_G0020443) Psmb9 (MGP_PahariEiJ_G0020442) H2-DMa (MGP_PahariEiJ_G0020441) Brd2 (MGP_PahariEiJ_G0020440) H2-Oa (MGP_PahariEiJ_G0020439) Col11a2 (MGP_PahariEiJ_G0020438) #15 Rxrb (MGP_PahariEiJ_G0020437) #16 Slc39a7 (MGP_PahariEiJ_G0020436) #17 Hsd17b8 (MGP_PahariEiJ_G0020435) #18 Ring1 (MGP_PahariEiJ_G0020434) #19 MGP_PahariEiJ_G0020433 ##21 B3galt4 (MGP_PahariEiJ_G0020432) #22 Wdr46 (MGP_PahariEiJ_G0020431) #23 Pfdn6 (MGP_PahariEiJ_G0020430) #24 Rgl2 (MGP_PahariEiJ_G0020429) #25 Zbtb22 (MGP_PahariEiJ_G0020428) #27 Tapbp (MGP_PahariEiJ_G0020427) #26 Daxx (MGP_PahariEiJ_G0020426) #28 Cd320 (MGP_PahariEiJ_G0020425) Ndufa7 (MGP_PahariEiJ_G0020424) Rps28 (MGP_PahariEiJ_G0020423) MGP_PahariEiJ_G0020422 Angptl4 (MGP_PahariEiJ_G0020421) Rab11b (MGP_PahariEiJ_G0020420) Marchf2 (MGP_PahariEiJ_G0020419) Hnrnpm (MGP_PahariEiJ_G0020418) Pram1 (MGP_PahariEiJ_G0020417) Rat MODERN SPECIES 12 Psmb9 (ENSRNOG00000000459) RT1-DMb (ENSRNOG00000049491) RT1-DMa (ENSRNOG00000066773) Brd2 (ENSRNOG00000000461) RT1-DOa (ENSRNOG00000026762) RT1-Ha (ENSRNOG00000045908) #14 RT1-Hb-ps1 (ENSRNOG00000061936) #13 Col11a2 (ENSRNOG00000000463) #15 Rxrb (ENSRNOG00000000464) #16 Slc39a7 (ENSRNOG00000000465) #17 Hsd17b8 (ENSRNOG00000000466) #18 Ring1 (ENSRNOG00000000467) #19 Vps52 (ENSRNOG00000000470) #20 ENSRNOG00000062487 ENSRNOG00000069209 B3galt4 (ENSRNOG00000000471) #22 Wdr46 (ENSRNOG00000031171) #23 Pfdn6 (ENSRNOG00000000473) #24 Rgl2 (ENSRNOG00000000474) #25 Tapbp (ENSRNOG00000029500) #26 Zbtb22 (ENSRNOG00000000476) #27 Daxx (ENSRNOG00000000477) #28 AA926063 (ENSRNOG00000000478) Kifc1 (ENSRNOG00000000479) #29 Phf1 (ENSRNOG00000000480) #30 Cuta (ENSRNOG00000000481) Syngap1 (ENSRNOG00000000483) #31 Zbtb9 (ENSRNOG00000026799) #32 Ggnbp1 (ENSRNOG00000000486) Bak1 (ENSRNOG00000000485) #33 Itpr3 (ENSRNOG00000052795) Upper Galilee mountains blind mole rat MODERN SPECIES 1087 Col11a2 (ENSNGAG00000019134) #15 Rxrb (ENSNGAG00000014876) #16 Slc39a7 (ENSNGAG00000014278) #17 Hsd17b8 (ENSNGAG00000014005) #18 Ring1 (ENSNGAG00000013045) #19 Vps52 (ENSNGAG00000009823) #20 ENSNGAG00000004272 ##21 B3galt4 (ENSNGAG00000017221) #22 Wdr46 (ENSNGAG00000007450) #23 Pfdn6 (ENSNGAG00000004185) #24 Rgl2 (ENSNGAG00000001749) #25 Tapbp (ENSNGAG00000000457) #26 ENSNGAG00000019692 ENSNGAG00000016919 #29 Phf1 (ENSNGAG00000014246) #30 Cuta (ENSNGAG00000013238) Syngap1 (ENSNGAG00000007288) #31 Zbtb9 (ENSNGAG00000017613) #32 Bak1 (ENSNGAG00000000971) #33 Ggnbp1 (ENSNGAG00000000329) Itpr3 (ENSNGAG00000016614) Uqcc2 (ENSNGAG00000013059) Ip6k3 (ENSNGAG00000012474) Kangaroo rat MODERN SPECIES 519 Tap1 (ENSDORG00000029698) Psmb9 (ENSDORG00000006231) ENSDORG00000005172 ENSDORG00000005173 Brd2 (ENSDORG00000004497) H2-Oa (ENSDORG00000004499) ENSDORG00000004500 #14 ENSDORG00000024606 #13 Col11a2 (ENSDORG00000013815) #15 Rxrb (ENSDORG00000013816) #16 Slc39a7 (ENSDORG00000013818) #17 Hsd17b8 (ENSDORG00000013819) #18 Ring1 (ENSDORG00000013820) #19 Vps52 (ENSDORG00000013822) #20 ENSDORG00000013825 ##21 B3galt4 (ENSDORG00000013826) #22 Wdr46 (ENSDORG00000013827) #23 ENSDORG00000013828 #24 Rgl2 (ENSDORG00000013829) #25 Tapbp (ENSDORG00000013835) #26 Zbtb22 (ENSDORG00000013837) #27 Daxx (ENSDORG00000013838) #28 ENSDORG00000003255 #29 Phf1 (ENSDORG00000003258) #30 Cuta (ENSDORG00000003261) Syngap1 (ENSDORG00000003262) #31 Zbtb9 (ENSDORG00000003264) #32 Bak1 (ENSDORG00000023188) #33 Itpr3 (ENSDORG00000001447) Uqcc2 (ENSDORG00000001460) Ip6k3 (ENSDORG00000001462) Rodentia_A ANCESTRAL SPECIES 8 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 Hystricomorpha_a ANCESTRAL SPECIES 42 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00390000012691.c.b.p ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 Hystricomorpha_b ANCESTRAL SPECIES 3 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d.o ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 ENSGT00940000160955 Degu MODERN SPECIES 46 PSMB9 (ENSODEG00000017656) TAP2 (ENSODEG00000017797) PSMB8 (ENSODEG00000017662) HLA-DMB (ENSODEG00000017802) ENSODEG00000017381 BRD2 (ENSODEG00000017239) HLA-DOA (ENSODEG00000017569) HLA-DPA1 (ENSODEG00000017716) #14 COL11A2 (ENSODEG00000017513) #15 RXRB (ENSODEG00000017146) #16 SLC39A7 (ENSODEG00000017361) #17 HSD17B8 (ENSODEG00000017486) #18 RING1 (ENSODEG00000017691) #19 VPS52 (ENSODEG00000017744) #20 ENSODEG00000017344 ##21 B3GALT4 (ENSODEG00000017281) #22 WDR46 (ENSODEG00000017342) #23 ENSODEG00000017649 #24 RGL2 (ENSODEG00000017326) #25 TAPBP (ENSODEG00000017301) #26 DAXX (ENSODEG00000017044) #28 ENSODEG00000017039 KIFC1 (ENSODEG00000017215) #29 PHF1 (ENSODEG00000017098) #30 CUTA (ENSODEG00000017063) SYNGAP1 (ENSODEG00000017205) #31 ZBTB9 (ENSODEG00000017442) #32 BAK1 (ENSODEG00000017211) #33 ITPR3 (ENSODEG00000017165) ENSODEG00000017142 IP6K3 (ENSODEG00000016935) Guinea pig MODERN SPECIES 15 HLA-DMB (ENSCPOG00000002810) HLA-DMA (ENSCPOG00000015044) BRD2 (ENSCPOG00000002811) HLA-DOA (ENSCPOG00000012562) ENSCPOG00000002427 #14 ENSCPOG00000032859 #13 ENSCPOG00000024142 #13 ENSCPOG00000035477 #14 COL11A2 (ENSCPOG00000020466) #15 RXRB (ENSCPOG00000013936) #16 SLC39A7 (ENSCPOG00000023790) #17 HSD17B8 (ENSCPOG00000013940) #18 RING1 (ENSCPOG00000013943) #19 VPS52 (ENSCPOG00000013947) #20 RPS18 (ENSCPOG00000019675) ##21 B3GALT4 (ENSCPOG00000012731) #22 WDR46 (ENSCPOG00000012733) #23 PFDN6 (ENSCPOG00000019520) #24 RGL2 (ENSCPOG00000012737) #25 TAPBP (ENSCPOG00000024169) #26 ZBTB22 (ENSCPOG00000035676) #27 DAXX (ENSCPOG00000006780) #28 KIFC1 (ENSCPOG00000010632) #29 PHF1 (ENSCPOG00000008751) #30 CUTA (ENSCPOG00000008762) SYNGAP1 (ENSCPOG00000002979) #31 ZBTB9 (ENSCPOG00000035179) #32 BAK1 (ENSCPOG00000000108) #33 ITPR3 (ENSCPOG00000014107) UQCC2 (ENSCPOG00000034353) IP6K3 (ENSCPOG00000013261) Naked mole-rat female MODERN SPECIES 4 PSMB8 (ENSHGLG00000017087) TAP1 (ENSHGLG00000017081) PSMB9 (ENSHGLG00000036914) HLA-DMB (ENSHGLG00000017060) HLA-DMA (ENSHGLG00000017048) BRD2 (ENSHGLG00000019334) HLA-DOA (ENSHGLG00000019255) HLA-DPA1 (ENSHGLG00000019266) #14 HLA-DPB1 (ENSHGLG00000019389) #13 COL11A2 (ENSHGLG00000018531) #15 RXRB (ENSHGLG00000018456) #16 SLC39A7 (ENSHGLG00000018434) #17 HSD17B8 (ENSHGLG00000019497) #18 RING1 (ENSHGLG00000019474) #19 VPS52 (ENSHGLG00000017226) #20 B3GALT4 (ENSHGLG00000046221) #22 WDR46 (ENSHGLG00000017190) #23 PFDN6 (ENSHGLG00000017170) #24 RGL2 (ENSHGLG00000017158) #25 TAPBP (ENSHGLG00000017138) #26 ZBTB22 (ENSHGLG00000017146) #27 ENSHGLG00000017195 #28 ENSHGLG00000032903 ENSHGLG00000049441 ENSHGLG00000019183 CUL9 (ENSHGLG00000019373) DNPH1 (ENSHGLG00000045212) TTBK1 (ENSHGLG00000019189) SLC22A7 (ENSHGLG00000019228) CRIP3 (ENSHGLG00000017216) ZNF318 (ENSHGLG00000017209) Sciuridae ANCESTRAL SPECIES 1 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Marmotini ANCESTRAL SPECIES 18 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Marmotini_b ANCESTRAL SPECIES 8 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Arctic ground squirrel MODERN SPECIES 25 HLA-DMB (ENSUPAG00010005014) HLA-DMA (ENSUPAG00010005022) BRD2 (ENSUPAG00010005033) HLA-DOA (ENSUPAG00010005068) HLA-DPB1 (ENSUPAG00010005123) #13 HLA-DPA1 (ENSUPAG00010012558) #14 COL11A2 (ENSUPAG00010012591) #15 RXRB (ENSUPAG00010013376) #16 SLC39A7 (ENSUPAG00010013405) #17 HSD17B8 (ENSUPAG00010013412) #18 RING1 (ENSUPAG00010013424) #19 VPS52 (ENSUPAG00010013433) #20 ENSUPAG00010013506 ##21 B3GALT4 (ENSUPAG00010013513) #22 WDR46 (ENSUPAG00010013516) #23 PFDN6 (ENSUPAG00010013562) #24 RGL2 (ENSUPAG00010013583) #25 TAPBP (ENSUPAG00010013596) #26 ZBTB22 (ENSUPAG00010013610) #27 DAXX (ENSUPAG00010013614) #28 SMIM40 (ENSUPAG00010013617) KIFC1 (ENSUPAG00010013621) #29 PHF1 (ENSUPAG00010013695) #30 CUTA (ENSUPAG00010013747) SYNGAP1 (ENSUPAG00010013762) #31 ZBTB9 (ENSUPAG00010013935) #32 ENSUPAG00010013936 BAK1 (ENSUPAG00010013946) #33 ENSUPAG00010013955 Squirrel MODERN SPECIES 76 TAP1 (ENSSTOG00000003451) PSMB9 (ENSSTOG00000003475) HLA-DMB (ENSSTOG00000019821) HLA-DMA (ENSSTOG00000009246) BRD2 (ENSSTOG00000010807) HLA-DOA (ENSSTOG00000010820) HLA-DPA1 (ENSSTOG00000003558) #14 HLA-DPB1 (ENSSTOG00000003567) #13 COL11A2 (ENSSTOG00000003578) #15 RXRB (ENSSTOG00000027099) #16 SLC39A7 (ENSSTOG00000014304) #17 HSD17B8 (ENSSTOG00000020853) #18 RING1 (ENSSTOG00000026166) #19 VPS52 (ENSSTOG00000002397) #20 ENSSTOG00000002417 ##21 B3GALT4 (ENSSTOG00000024877) #22 WDR46 (ENSSTOG00000002433) #23 PFDN6 (ENSSTOG00000027428) #24 RGL2 (ENSSTOG00000024728) #25 TAPBP (ENSSTOG00000025004) #26 ZBTB22 (ENSSTOG00000021763) #27 DAXX (ENSSTOG00000002441) #28 KIFC1 (ENSSTOG00000002449) #29 PHF1 (ENSSTOG00000002459) #30 CUTA (ENSSTOG00000002474) SYNGAP1 (ENSSTOG00000002482) #31 ZBTB9 (ENSSTOG00000028789) #32 BAK1 (ENSSTOG00000002492) #33 ENSSTOG00000023969 ITPR3 (ENSSTOG00000000825) UQCC2 (ENSSTOG00000000855) Alpin marmot MODERN SPECIES 20 TAP1 (ENSMMMG00000024221) PSMB9 (ENSMMMG00000024222) HLA-DMB (ENSMMMG00000024223) HLA-DMA (ENSMMMG00000024224) BRD2 (ENSMMMG00000024225) HLA-DOA (ENSMMMG00000024226) HLA-DPA1 (ENSMMMG00000024227) #14 HLA-DPB1 (ENSMMMG00000024228) #13 COL11A2 (ENSMMMG00000024229) #15 RXRB (ENSMMMG00000024230) #16 SLC39A7 (ENSMMMG00000024231) #17 HSD17B8 (ENSMMMG00000024232) #18 RING1 (ENSMMMG00000024233) #19 VPS52 (ENSMMMG00000024234) #20 ENSMMMG00000024235 ##21 B3GALT4 (ENSMMMG00000024236) #22 WDR46 (ENSMMMG00000024237) #23 PFDN6 (ENSMMMG00000024238) #24 RGL2 (ENSMMMG00000024239) #25 TAPBP (ENSMMMG00000024240) #26 DAXX (ENSMMMG00000024241) #28 SMIM40 (ENSMMMG00000024242) KIFC1 (ENSMMMG00000024243) #29 PHF1 (ENSMMMG00000024244) #30 CUTA (ENSMMMG00000024245) SYNGAP1 (ENSMMMG00000024248) #31 ZBTB9 (ENSMMMG00000024268) #32 BAK1 (ENSMMMG00000024272) #33 ENSMMMG00000024274 ITPR3 (ENSMMMG00000024278) UQCC2 (ENSMMMG00000024286) Eurasian red squirrel MODERN SPECIES 16 PSMB9 (ENSSVLG00005006563) HLA-DMB (ENSSVLG00005006515) HLA-DMA (ENSSVLG00005006465) BRD2 (ENSSVLG00005006374) HLA-DOA (ENSSVLG00005006335) HLA-DPA1 (ENSSVLG00005006304) #14 HLA-DPB1 (ENSSVLG00005006269) #13 COL11A2 (ENSSVLG00005005202) #15 RXRB (ENSSVLG00005004952) #16 SLC39A7 (ENSSVLG00005004925) #17 HSD17B8 (ENSSVLG00005004902) #18 RING1 (ENSSVLG00005004804) #19 ENSSVLG00005004778 VPS52 (ENSSVLG00005004757) #20 RPS18 (ENSSVLG00005004721) ##21 B3GALT4 (ENSSVLG00005004704) #22 WDR46 (ENSSVLG00005004694) #23 ENSSVLG00005004670 #24 RGL2 (ENSSVLG00005004647) #25 TAPBP (ENSSVLG00005004624) #26 ZBTB22 (ENSSVLG00005004608) #27 DAXX (ENSSVLG00005004592) #28 SMIM40 (ENSSVLG00005004582) ENSSVLG00005004551 #29 PHF1 (ENSSVLG00005004509) #30 CUTA (ENSSVLG00005004466) SYNGAP1 (ENSSVLG00005004360) #31 ZBTB9 (ENSSVLG00005004305) #32 ENSSVLG00005004290 ENSSVLG00005010748 #33 ENSSVLG00005010672 Primates ANCESTRAL SPECIES 5 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 Simiiformes ANCESTRAL SPECIES 5 ENSGT00390000004757.`b.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00910000146977 Catarrhini ANCESTRAL SPECIES 5 ENSGT00390000004757.`b.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00390000004757.`b.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 ENSGT00510000048041 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00390000004757.`b.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00510000048041.p ENSGT00910000146977 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00390000004757.`b.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00910000147736 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Macaca ANCESTRAL SPECIES 9 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b ENSGT00940000162112 ENSGT00940000162498.k #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00910000147736 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b ENSGT00940000162112 ENSGT00940000162498.k #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160668 #18 ENSGT00940000160076 #17 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00530000064449.E.l ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00390000015789.c.a.b ENSGT00910000146977 Crab-eating macaque MODERN SPECIES 14 HLA-DOB (ENSMFAG00000003652) TAP2 (ENSMFAG00000037139) TAP1 (ENSMFAG00000041369) PSMB9 (ENSMFAG00000038128) HLA-DMB (ENSMFAG00000004018) HLA-DMA (ENSMFAG00000042109) ENSMFAG00000060572 BRD2 (ENSMFAG00000037520) HLA-DOA (ENSMFAG00000058905) RXRB (ENSMFAG00000003583) #16 HSD17B8 (ENSMFAG00000037332) #18 SLC39A7 (ENSMFAG00000038848) #17 RING1 (ENSMFAG00000002610) #19 COL11A2 (ENSMFAG00000017491) #15 RPS18 (ENSMFAG00000032199) ##21 B3GALT4 (ENSMFAG00000041942) #22 WDR46 (ENSMFAG00000000475) #23 PFDN6 (ENSMFAG00000041216) #24 RGL2 (ENSMFAG00000039597) #25 TAPBP (ENSMFAG00000000942) #26 ZBTB22 (ENSMFAG00000011344) #27 DAXX (ENSMFAG00000038728) #28 ENSMFAG00000058856 KIFC1 (ENSMFAG00000036107) #29 PHF1 (ENSMFAG00000040302) #30 CUTA (ENSMFAG00000044039) SYNGAP1 (ENSMFAG00000041047) #31 ZBTB9 (ENSMFAG00000025074) #32 BAK1 (ENSMFAG00000029410) #33 EIF1 (ENSMFAG00000046072) ENSMFAG00000037076 Rhesus MODERN SPECIES 14 PSMB8 (ENSMMUG00000011301) PSMB9 (ENSMMUG00000011304) ENSMMUG00000063291 MAMU-DMB (ENSMMUG00000022626) BRD2 (ENSMMUG00000023138) MAMU-DOA (ENSMMUG00000015734) ENSMMUG00000041095 ENSMMUG00000019371 #14 COL11A2 (ENSMMUG00000003850) #15 RXRB (ENSMMUG00000003858) #16 HSD17B8 (ENSMMUG00000003861) #18 SLC39A7 (ENSMMUG00000003859) #17 RING1 (ENSMMUG00000003863) #19 ENSMMUG00000003867 ##21 VPS52 (ENSMMUG00000003864) #20 B3GALT4 (ENSMMUG00000064507) #22 WDR46 (ENSMMUG00000003869) #23 PFDN6 (ENSMMUG00000003871) #24 RGL2 (ENSMMUG00000003872) #25 TAPBP (ENSMMUG00000003875) #26 ZBTB22 (ENSMMUG00000003876) #27 DAXX (ENSMMUG00000004287) ENSMMUG00000051253 KIFC1 (ENSMMUG00000007477) #29 CUTA (ENSMMUG00000010658) PHF1 (ENSMMUG00000010649) #30 SYNGAP1 (ENSMMUG00000010659) #31 ZBTB9 (ENSMMUG00000029765) #32 BAK1 (ENSMMUG00000063304) #33 ENSMMUG00000019505 ENSMMUG00000052902 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.qc.b ENSGT00940000162112 ENSGT00940000162498.n #14 ENSGT00940000162498.m #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00910000147736 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Olive baboon MODERN SPECIES 16 PSMB9 (ENSPANG00000033974) HLA-DMB (ENSPANG00000019593) HLA-DMA (ENSPANG00000026492) ENSPANG00000035618 BRD2 (ENSPANG00000019626) HLA-DOA (ENSPANG00000031879) HLA-DPA1 (ENSPANG00000018967) #14 HLA-DPB1 (ENSPANG00000005764) #13 COL11A2 (ENSPANG00000009194) #15 RXRB (ENSPANG00000018527) #16 SLC39A7 (ENSPANG00000023633) #17 HSD17B8 (ENSPANG00000023634) #18 RING1 (ENSPANG00000023635) #19 VPS52 (ENSPANG00000026491) #20 RPS18 (ENSPANG00000029306) ##21 B3GALT4 (ENSPANG00000040674) #22 WDR46 (ENSPANG00000009193) #23 PFDN6 (ENSPANG00000025458) #24 RGL2 (ENSPANG00000023572) #25 TAPBP (ENSPANG00000022348) #26 ZBTB22 (ENSPANG00000007019) #27 DAXX (ENSPANG00000020874) #28 SMIM40 (ENSPANG00000047345) ENSPANG00000038941 KIFC1 (ENSPANG00000020271) #29 PHF1 (ENSPANG00000009191) #30 CUTA (ENSPANG00000022347) SYNGAP1 (ENSPANG00000014561) #31 ZBTB9 (ENSPANG00000012823) #32 ENSPANG00000039481 BAK1 (ENSPANG00000031258) #33 Vervet Monkey MODERN SPECIES 8 PSMB8 (ENSCSAG00000009409) TAP1 (ENSCSAG00000009417) PSMB9 (ENSCSAG00000009427) HLA-DMB (ENSCSAG00000009430) HLA-DMA (ENSCSAG00000009436) BRD2 (ENSCSAG00000009445) HLA-DOA (ENSCSAG00000009452) ENSCSAG00000009455 #14 ENSCSAG00000009461 #13 COL11A2 (ENSCSAG00000009488) #15 RXRB (ENSCSAG00000009510) #16 SLC39A7 (ENSCSAG00000009519) #17 HSD17B8 (ENSCSAG00000009530) #18 RING1 (ENSCSAG00000009538) #19 VPS52 (ENSCSAG00000009546) #20 B3GALT4 (ENSCSAG00000019308) #22 WDR46 (ENSCSAG00000009552) #23 PFDN6 (ENSCSAG00000009556) #24 RGL2 (ENSCSAG00000009562) #25 TAPBP (ENSCSAG00000009568) #26 ZBTB22 (ENSCSAG00000019307) #27 DAXX (ENSCSAG00000009571) #28 KIFC1 (ENSCSAG00000009576) #29 PHF1 (ENSCSAG00000009589) #30 CUTA (ENSCSAG00000009582) SYNGAP1 (ENSCSAG00000009596) #31 ZBTB9 (ENSCSAG00000019306) #32 BAK1 (ENSCSAG00000009617) #33 ITPR3 (ENSCSAG00000009649) UQCC2 (ENSCSAG00000009662) IP6K3 (ENSCSAG00000009672) Hominoidea ANCESTRAL SPECIES 4 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.a ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.a ##21 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.a ##21 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.a ##21 ENSGT00390000012691.c.b.n ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 Human MODERN SPECIES 18 TAP1 (ENSG00000168394) HLA-DMB (ENSG00000242574) ENSG00000248993 HLA-DMA (ENSG00000204257) BRD2 (ENSG00000204256) HLA-DOA (ENSG00000204252) HLA-DPA1 (ENSG00000231389) #14 HLA-DPB1 (ENSG00000223865) #13 COL11A2 (ENSG00000204248) #15 RXRB (ENSG00000204231) #16 SLC39A7 (ENSG00000112473) #17 HSD17B8 (ENSG00000204228) #18 RING1 (ENSG00000204227) #19 VPS52 (ENSG00000223501) #20 RPS18 (ENSG00000231500) ##21 B3GALT4 (ENSG00000235863) #22 WDR46 (ENSG00000227057) #23 PFDN6 (ENSG00000204220) #24 RGL2 (ENSG00000237441) #25 TAPBP (ENSG00000231925) #26 ZBTB22 (ENSG00000236104) #27 DAXX (ENSG00000204209) #28 SMIM40 (ENSG00000286920) KIFC1 (ENSG00000237649) #29 PHF1 (ENSG00000112511) #30 CUTA (ENSG00000112514) SYNGAP1 (ENSG00000197283) #31 ZBTB9 (ENSG00000213588) #32 BAK1 (ENSG00000030110) #33 ITPR3 (ENSG00000096433) UQCC2 (ENSG00000137288) Pan ANCESTRAL SPECIES 5 ENSGT00390000004757.`b.b.a.a.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.m.a ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.i.a #33 ENSGT00940000157078 ENSGT00910000146977 ENSGT00510000048041 Bonobo MODERN SPECIES 19 ENSPPAG00000033020 HLA-DMB (ENSPPAG00000037856) HLA-DMA (ENSPPAG00000041639) ENSPPAG00000027710 BRD2 (ENSPPAG00000016843) HLA-DOA (ENSPPAG00000036361) HLA-DPA1 (ENSPPAG00000031863) #14 HLA-DPB1 (ENSPPAG00000041449) #13 COL11A2 (ENSPPAG00000013099) #15 RXRB (ENSPPAG00000038590) #16 SLC39A7 (ENSPPAG00000028225) #17 HSD17B8 (ENSPPAG00000032286) #18 RING1 (ENSPPAG00000001290) #19 VPS52 (ENSPPAG00000039628) #20 RPS18 (ENSPPAG00000037432) ##21 B3GALT4 (ENSPPAG00000040442) #22 WDR46 (ENSPPAG00000029606) #23 PFDN6 (ENSPPAG00000026096) #24 RGL2 (ENSPPAG00000030717) #25 TAPBP (ENSPPAG00000024524) #26 ZBTB22 (ENSPPAG00000004427) #27 DAXX (ENSPPAG00000028039) #28 ENSPPAG00000028889 ENSPPAG00000039323 KIFC1 (ENSPPAG00000042032) #29 PHF1 (ENSPPAG00000034810) #30 CUTA (ENSPPAG00000037422) SYNGAP1 (ENSPPAG00000036420) #31 ZBTB9 (ENSPPAG00000016279) #32 BAK1 (ENSPPAG00000029631) #33 ITPR3 (ENSPPAG00000040289) Orangutan MODERN SPECIES 19 PSMB9 (ENSPPYG00000017225) HLA-DMB (ENSPPYG00000017226) ENSPPYG00000017227 ENSPPYG00000031820 BRD2 (ENSPPYG00000017228) HLA-DOA (ENSPPYG00000016495) ENSPPYG00000029571 #13 HLA-DPA1 (ENSPPYG00000017229) #14 COL11A2 (ENSPPYG00000017238) #15 RXRB (ENSPPYG00000017239) #16 SLC39A7 (ENSPPYG00000017240) #17 HSD17B8 (ENSPPYG00000017241) #18 RING1 (ENSPPYG00000017242) #19 VPS52 (ENSPPYG00000017243) #20 ENSPPYG00000025953 ##21 B3GALT4 (ENSPPYG00000017244) #22 WDR46 (ENSPPYG00000017245) #23 PFDN6 (ENSPPYG00000038269) #24 RGL2 (ENSPPYG00000017247) #25 TAPBP (ENSPPYG00000017248) #26 ZBTB22 (ENSPPYG00000017249) #27 DAXX (ENSPPYG00000017250) #28 SMIM40 (ENSPPYG00000031014) ENSPPYG00000016496 KIFC1 (ENSPPYG00000016497) #29 PHF1 (ENSPPYG00000016498) #30 CUTA (ENSPPYG00000016499) SYNGAP1 (ENSPPYG00000016500) #31 ZBTB9 (ENSPPYG00000016501) #32 BAK1 (ENSPPYG00000016502) #33 ITPR3 (ENSPPYG00000016504) Gibbon MODERN SPECIES 10 ENSNLEG00000032895 HLA-DMB (ENSNLEG00000006770) HLA-DMA (ENSNLEG00000006775) ENSNLEG00000032110 BRD2 (ENSNLEG00000006782) ENSNLEG00000031675 HLA-DPA1 (ENSNLEG00000034417) #14 HLA-DPB1 (ENSNLEG00000006801) #13 ENSNLEG00000030023 #15 RXRB (ENSNLEG00000006809) #16 SLC39A7 (ENSNLEG00000006815) #17 HSD17B8 (ENSNLEG00000006824) #18 RING1 (ENSNLEG00000006830) #19 VPS52 (ENSNLEG00000006832) #20 RPS18 (ENSNLEG00000006840) ##21 B3GALT4 (ENSNLEG00000006841) #22 ENSNLEG00000006842 #23 PFDN6 (ENSNLEG00000034338) #24 RGL2 (ENSNLEG00000006847) #25 ENSNLEG00000006852 #26 ZBTB22 (ENSNLEG00000030172) #27 KIFC1 (ENSNLEG00000008288) #29 PHF1 (ENSNLEG00000008320) #30 ENSNLEG00000033973 #31 ZBTB9 (ENSNLEG00000008348) #32 BAK1 (ENSNLEG00000028170) #33 ITPR3 (ENSNLEG00000008373) UQCC2 (ENSNLEG00000035324) IP6K3 (ENSNLEG00000008448) ENSNLEG00000008472 MLN (ENSNLEG00000008478) Platyrrhini ANCESTRAL SPECIES 2 ENSGT00390000004757.`b.a ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.lc ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.b #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00910000146977 Cebidae ANCESTRAL SPECIES 5 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b.lc ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.b #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 Marmoset MODERN SPECIES 16 TAP2 (ENSCJAG00000021550) TAP1 (ENSCJAG00000021552) PSMB9 (ENSCJAG00000021553) HLA-DMA (ENSCJAG00000021558) ENSCJAG00000021566 HLA-DOA (ENSCJAG00000021571) HLA-DPA1 (ENSCJAG00000057301) #14 HLA-DPB1 (ENSCJAG00000021575) #13 COL11A2 (ENSCJAG00000021577) #15 RXRB (ENSCJAG00000021619) #16 SLC39A7 (ENSCJAG00000021622) #17 ENSCJAG00000021632 #18 RING1 (ENSCJAG00000081691) #19 VPS52 (ENSCJAG00000021644) #20 ENSCJAG00000021650 ##21 B3GALT4 (ENSCJAG00000043225) #22 WDR46 (ENSCJAG00000021659) #23 PFDN6 (ENSCJAG00000021665) #24 RGL2 (ENSCJAG00000021668) #25 TAPBP (ENSCJAG00000021675) #26 ZBTB22 (ENSCJAG00000021676) #27 DAXX (ENSCJAG00000021679) #28 SMIM40 (ENSCJAG00000052899) KIFC1 (ENSCJAG00000021681) #29 PHF1 (ENSCJAG00000021684) #30 CUTA (ENSCJAG00000021690) SYNGAP1 (ENSCJAG00000021691) #31 ZBTB9 (ENSCJAG00000021692) #32 ENSCJAG00000084888 ENSCJAG00000084010 ENSCJAG00000016047 #33 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Bushbaby MODERN SPECIES 146 ENSOGAG00000013823 HLA-DMB (ENSOGAG00000032749) HLA-DMA (ENSOGAG00000006029) BRD2 (ENSOGAG00000006473) HLA-DOA (ENSOGAG00000014685) HLA-DPA1 (ENSOGAG00000006476) #14 ENSOGAG00000016138 #13 ENSOGAG00000034269 COL11A2 (ENSOGAG00000025975) #15 RXRB (ENSOGAG00000011689) #16 SLC39A7 (ENSOGAG00000030006) #17 HSD17B8 (ENSOGAG00000006214) #18 RING1 (ENSOGAG00000006220) #19 VPS52 (ENSOGAG00000006222) #20 RPS18 (ENSOGAG00000006225) ##21 B3GALT4 (ENSOGAG00000006228) #22 WDR46 (ENSOGAG00000006230) #23 ENSOGAG00000028341 #24 RGL2 (ENSOGAG00000003996) #25 TAPBP (ENSOGAG00000003999) #26 ZBTB22 (ENSOGAG00000033956) #27 ENSOGAG00000004002 #28 KIFC1 (ENSOGAG00000013028) #29 PHF1 (ENSOGAG00000015551) #30 ENSOGAG00000015556 SYNGAP1 (ENSOGAG00000015560) #31 ZBTB9 (ENSOGAG00000026628) #32 BAK1 (ENSOGAG00000015573) #33 ENSOGAG00000015578 ITPR3 (ENSOGAG00000015581) UQCC2 (ENSOGAG00000015604) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT01030000234972 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Suina ANCESTRAL SPECIES 17 ENSGT00940000161065 ENSGT00390000015862 ENSGT00940000154025.b ENSGT00940000158352 ENSGT00390000011908 ENSGT00940000157134 ENSGT00390000009790 ENSGT00940000155064 ENSGT00390000017590 ENSGT00390000011354 ENSGT00390000016954 ENSGT00940000155008.C ENSGT00940000162318 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.k #24 ENSGT01030000234972 ENSGT00390000010512.l #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 Pig MODERN SPECIES 15 MLIP (ENSSSCG00000001485) LRRC1 (ENSSSCG00000001486) KLHL31 (ENSSSCG00000001487) GCLC (ENSSSCG00000001488) KHDRBS2 (ENSSSCG00000001490) ENSSSCG00000062933 PRIM2 (ENSSSCG00000001493) RAB23 (ENSSSCG00000029539) BAG2 (ENSSSCG00000033526) ZNF451 (ENSSSCG00000001497) BEND6 (ENSSSCG00000001498) DST (ENSSSCG00000001499) COL21A1 (ENSSSCG00000001500) VPS52 (ENSSSCG00000001501) #20 RPS18 (ENSSSCG00000001502) ##21 B3GALT4 (ENSSSCG00000001503) #22 WDR46 (ENSSSCG00000001504) #23 ENSSSCG00000001505 #24 RGL2 (ENSSSCG00000001506) #25 TAPBP (ENSSSCG00000001507) #26 ZBTB22 (ENSSSCG00000054523) #27 DAXX (ENSSSCG00000001509) #28 SMIM40 (ENSSSCG00000059451) KIFC1 (ENSSSCG00000001510) #29 PHF1 (ENSSSCG00000001511) #30 CUTA (ENSSSCG00000001512) SYNGAP1 (ENSSSCG00000001513) #31 ZBTB9 (ENSSSCG00000060402) #32 ENSSSCG00000001516 #33 ENSSSCG00000001517 ITPR3 (ENSSSCG00000001518) Chacoan peccary MODERN SPECIES 782 TINAG (ENSCWAG00000012390) MLIP (ENSCWAG00000011825) LRRC1 (ENSCWAG00000011723) KLHL31 (ENSCWAG00000011695) GCLC (ENSCWAG00000011415) KHDRBS2 (ENSCWAG00000011294) PRIM2 (ENSCWAG00000011218) RAB23 (ENSCWAG00000011155) BAG2 (ENSCWAG00000011125) ZNF451 (ENSCWAG00000010999) BEND6 (ENSCWAG00000010920) DST (ENSCWAG00000007332) COL21A1 (ENSCWAG00000006695) VPS52 (ENSCWAG00000006627) #20 ENSCWAG00000006594 ##21 B3GALT4 (ENSCWAG00000006580) #22 WDR46 (ENSCWAG00000006519) #23 ENSCWAG00000006503 PFDN6 (ENSCWAG00000006480) #24 ENSCWAG00000006431 #25 TAPBP (ENSCWAG00000006363) #26 ZBTB22 (ENSCWAG00000006346) #27 DAXX (ENSCWAG00000006331) #28 SMIM40 (ENSCWAG00000006317) KIFC1 (ENSCWAG00000006260) #29 PHF1 (ENSCWAG00000006199) #30 CUTA (ENSCWAG00000006165) SYNGAP1 (ENSCWAG00000006055) #31 ZBTB9 (ENSCWAG00000006043) #32 BAK1 (ENSCWAG00000006011) #33 ENSCWAG00000005968 Artiodactyla_a ANCESTRAL SPECIES 19 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.g #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.g #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000153786.e.a.b ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.g #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000153786.e.a.b ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000154732.q.b.a ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.g #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000154732.q.b.a ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022.g #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000153786.e.a.b.f ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Narwhal MODERN SPECIES 310 TAP1 (ENSMMNG00015013311) PSMB9 (ENSMMNG00015013288) HLA-DMB (ENSMMNG00015013276) HLA-DMA (ENSMMNG00015013256) BRD2 (ENSMMNG00015013179) ENSMMNG00015013152 HLA-DOA (ENSMMNG00015013123) ENSMMNG00015013117 #13 COL11A2 (ENSMMNG00015012846) #15 RXRB (ENSMMNG00015012697) #16 SLC39A7 (ENSMMNG00015012682) #17 HSD17B8 (ENSMMNG00015012658) #18 ENSMMNG00015012638 #19 VPS52 (ENSMMNG00015012607) #20 ENSMMNG00015012591 ##21 B3GALT4 (ENSMMNG00015012584) #22 WDR46 (ENSMMNG00015012564) #23 PFDN6 (ENSMMNG00015012541) #24 RGL2 (ENSMMNG00015012522) #25 TAPBP (ENSMMNG00015012480) #26 ZBTB22 (ENSMMNG00015012464) #27 DAXX (ENSMMNG00015012453) #28 KIFC1 (ENSMMNG00015012412) #29 PHF1 (ENSMMNG00015012349) #30 CUTA (ENSMMNG00015012280) SYNGAP1 (ENSMMNG00015012086) #31 ENSMMNG00015012030 ZBTB9 (ENSMMNG00015012021) #32 BAK1 (ENSMMNG00015012006) #33 ENSMMNG00015011979 ENSMMNG00015011970 Beluga whale MODERN SPECIES 8 PSMB8 (ENSDLEG00000021995) TAP1 (ENSDLEG00000021996) PSMB9 (ENSDLEG00000008143) HLA-DMB (ENSDLEG00000008166) HLA-DMA (ENSDLEG00000008210) BRD2 (ENSDLEG00000008248) ENSDLEG00000008322 HLA-DOA (ENSDLEG00000008482) COL11A2 (ENSDLEG00000008562) #15 RXRB (ENSDLEG00000008760) #16 SLC39A7 (ENSDLEG00000008789) #17 HSD17B8 (ENSDLEG00000008819) #18 RING1 (ENSDLEG00000008919) #19 VPS52 (ENSDLEG00000008948) #20 RPS18 (ENSDLEG00000009077) ##21 B3GALT4 (ENSDLEG00000009097) #22 WDR46 (ENSDLEG00000009126) #23 PFDN6 (ENSDLEG00000009394) #24 RGL2 (ENSDLEG00000009432) #25 ENSDLEG00000009529 TAPBP (ENSDLEG00000009539) #26 ZBTB22 (ENSDLEG00000009549) #27 DAXX (ENSDLEG00000009561) #28 SMIM40 (ENSDLEG00000009639) KIFC1 (ENSDLEG00000009649) #29 PHF1 (ENSDLEG00000009666) #30 CUTA (ENSDLEG00000009700) SYNGAP1 (ENSDLEG00000009904) #31 ENSDLEG00000012321 ZBTB9 (ENSDLEG00000012333) #32 BAK1 (ENSDLEG00000012340) #33 Vaquita MODERN SPECIES 2 PSMB8 (ENSPSNG00000018160) TAP1 (ENSPSNG00000018201) PSMB9 (ENSPSNG00000018232) HLA-DMB (ENSPSNG00000018284) HLA-DMA (ENSPSNG00000018364) BRD2 (ENSPSNG00000018549) ENSPSNG00000018620 HLA-DOA (ENSPSNG00000018672) ENSPSNG00000018732 #13 COL11A2 (ENSPSNG00000019010) #15 RXRB (ENSPSNG00000020305) #16 SLC39A7 (ENSPSNG00000020344) #17 HSD17B8 (ENSPSNG00000020389) #18 RING1 (ENSPSNG00000020433) #19 VPS52 (ENSPSNG00000020483) #20 B3GALT4 (ENSPSNG00000020525) #22 WDR46 (ENSPSNG00000020574) #23 PFDN6 (ENSPSNG00000020614) #24 RGL2 (ENSPSNG00000011206) #25 TAPBP (ENSPSNG00000011408) #26 ZBTB22 (ENSPSNG00000011484) #27 DAXX (ENSPSNG00000011511) #28 SMIM40 (ENSPSNG00000011575) KIFC1 (ENSPSNG00000011613) #29 CUTA (ENSPSNG00000011726) SYNGAP1 (ENSPSNG00000012003) #31 ZBTB9 (ENSPSNG00000013410) #32 BAK1 (ENSPSNG00000013464) #33 ENSPSNG00000013586 ITPR3 (ENSPSNG00000013739) ENSPSNG00000014465 Sperm whale MODERN SPECIES 255 VPS52 (ENSPCTG00005015756) #20 RPS18 (ENSPCTG00005016112) ##21 B3GALT4 (ENSPCTG00005016212) #22 WDR46 (ENSPCTG00005016229) #23 PFDN6 (ENSPCTG00005016295) #24 RGL2 (ENSPCTG00005016381) #25 TAPBP (ENSPCTG00005016612) #26 ZBTB22 (ENSPCTG00005016698) #27 DAXX (ENSPCTG00005016713) #28 SMIM40 (ENSPCTG00005016743) Blue whale MODERN SPECIES 2 PSMB8 (ENSBMSG00010011493) TAP1 (ENSBMSG00010011477) PSMB9 (ENSBMSG00010011462) HLA-DMB (ENSBMSG00010011446) HLA-DMA (ENSBMSG00010011432) BRD2 (ENSBMSG00010011399) HLA-DOA (ENSBMSG00010011380) ENSBMSG00010011366 #13 COL11A2 (ENSBMSG00010010982) #15 RXRB (ENSBMSG00010010818) #16 SLC39A7 (ENSBMSG00010010802) #17 HSD17B8 (ENSBMSG00010010786) #18 ENSBMSG00010010769 #19 VPS52 (ENSBMSG00010010756) #20 RPS18 (ENSBMSG00010010743) ##21 B3GALT4 (ENSBMSG00010010736) #22 WDR46 (ENSBMSG00010010725) #23 ENSBMSG00010010714 #24 RGL2 (ENSBMSG00010010689) #25 TAPBP (ENSBMSG00010010652) #26 ZBTB22 (ENSBMSG00010010638) #27 DAXX (ENSBMSG00010010625) #28 SMIM40 (ENSBMSG00010010619) KIFC1 (ENSBMSG00010010611) #29 PHF1 (ENSBMSG00010010595) #30 CUTA (ENSBMSG00010010557) SYNGAP1 (ENSBMSG00010010019) #31 ZBTB9 (ENSBMSG00010009949) #32 BAK1 (ENSBMSG00010009926) #33 ENSBMSG00010009909 ITPR3 (ENSBMSG00010009844) Pecora ANCESTRAL SPECIES 21 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Percora_a ANCESTRAL SPECIES 12 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Bovidae ANCESTRAL SPECIES 13 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Caprinae ANCESTRAL SPECIES 16 ENSGT00940000160499 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Rambouillet Sheep MODERN SPECIES 12 TAP2 (ENSOARG00020025129) PSMB8 (ENSOARG00020025156) TAP1 (ENSOARG00020025187) ENSOARG00020025249 HLA-DMB (ENSOARG00020025272) HLA-DMA (ENSOARG00020025286) BRD2 (ENSOARG00020011534) HLA-DOA (ENSOARG00020011582) COL11A2 (ENSOARG00020011636) #15 RXRB (ENSOARG00020011980) #16 SLC39A7 (ENSOARG00020012152) #17 HSD17B8 (ENSOARG00020012212) #18 RING1 (ENSOARG00020012299) #19 VPS52 (ENSOARG00020012385) #20 RPS18 (ENSOARG00020012536) ##21 B3GALT4 (ENSOARG00020012594) #22 WDR46 (ENSOARG00020012626) #23 PFDN6 (ENSOARG00020012726) #24 RGL2 (ENSOARG00020012842) #25 TAPBP (ENSOARG00020013171) #26 ZBTB22 (ENSOARG00020013358) #27 DAXX (ENSOARG00020013385) #28 SMIM40 (ENSOARG00020013486) KIFC1 (ENSOARG00020013542) #29 PHF1 (ENSOARG00020013705) #30 CUTA (ENSOARG00020013904) SYNGAP1 (ENSOARG00020014272) #31 ZBTB9 (ENSOARG00020017726) #32 BAK1 (ENSOARG00020017744) #33 ENSOARG00020017836 ITPR3 (ENSOARG00020017959) Goat MODERN SPECIES 15 TAP2 (ENSCHIG00000017732) PSMB8 (ENSCHIG00000012829) TAP1 (ENSCHIG00000021983) PSMB9 (ENSCHIG00000021513) HLA-DMB (ENSCHIG00000026519) HLA-DMA (ENSCHIG00000009464) BRD2 (ENSCHIG00000013946) HLA-DOA (ENSCHIG00000014302) COL11A2 (ENSCHIG00000012269) #15 RXRB (ENSCHIG00000010266) #16 SLC39A7 (ENSCHIG00000024209) #17 HSD17B8 (ENSCHIG00000017839) #18 RING1 (ENSCHIG00000015685) #19 VPS52 (ENSCHIG00000023524) #20 RPS18 (ENSCHIG00000025263) ##21 B3GALT4 (ENSCHIG00000013295) #22 WDR46 (ENSCHIG00000017786) #23 ENSCHIG00000021078 #24 RGL2 (ENSCHIG00000009307) #25 TAPBP (ENSCHIG00000010108) #26 ZBTB22 (ENSCHIG00000003375) #27 ENSCHIG00000013938 #28 ENSCHIG00000026105 KIFC1 (ENSCHIG00000019665) #29 CUTA (ENSCHIG00000012220) PHF1 (ENSCHIG00000023053) #30 SYNGAP1 (ENSCHIG00000014463) #31 ZBTB9 (ENSCHIG00000003330) #32 BAK1 (ENSCHIG00000016258) #33 ENSCHIG00000007482 ITPR3 (ENSCHIG00000007818) Bovinae ANCESTRAL SPECIES 9 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Bos ANCESTRAL SPECIES 17 ENSGT00940000159023 ENSGT00940000159897 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Bos_a ANCESTRAL SPECIES 11 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Wild yak MODERN SPECIES 401 PSMB8 (ENSBMUG00000007942) TAP1 (ENSBMUG00000007967) PSMB9 (ENSBMUG00000007982) ENSBMUG00000007993 HLA-DMB (ENSBMUG00000008003) HLA-DMA (ENSBMUG00000008047) BRD2 (ENSBMUG00000008066) HLA-DOA (ENSBMUG00000008090) COL11A2 (ENSBMUG00000008342) #15 RXRB (ENSBMUG00000008461) #16 SLC39A7 (ENSBMUG00000008706) #17 HSD17B8 (ENSBMUG00000008752) #18 RING1 (ENSBMUG00000008786) #19 VPS52 (ENSBMUG00000008802) #20 ENSBMUG00000008818 ##21 B3GALT4 (ENSBMUG00000008835) #22 WDR46 (ENSBMUG00000008867) #23 PFDN6 (ENSBMUG00000008885) #24 RGL2 (ENSBMUG00000008900) #25 TAPBP (ENSBMUG00000008952) #26 ZBTB22 (ENSBMUG00000008980) #27 DAXX (ENSBMUG00000008993) #28 SMIM40 (ENSBMUG00000009010) KIFC1 (ENSBMUG00000009021) #29 PHF1 (ENSBMUG00000009079) #30 CUTA (ENSBMUG00000009105) SYNGAP1 (ENSBMUG00000009132) #31 ZBTB9 (ENSBMUG00000009163) #32 BAK1 (ENSBMUG00000009180) #33 ENSBMUG00000009194 ITPR3 (ENSBMUG00000015536) Domestic yak MODERN SPECIES 16 HLA-DOB (ENSBGRG00000022347) TAP2 (ENSBGRG00000022189) PSMB8 (ENSBGRG00000022108) TAP1 (ENSBGRG00000022060) ENSBGRG00000021991 HLA-DMB (ENSBGRG00000021922) HLA-DMA (ENSBGRG00000021851) BRD2 (ENSBGRG00000021629) HLA-DOA (ENSBGRG00000021588) COL11A2 (ENSBGRG00000019137) #15 RXRB (ENSBGRG00000019018) #16 SLC39A7 (ENSBGRG00000018980) #17 HSD17B8 (ENSBGRG00000018839) #18 RING1 (ENSBGRG00000018754) #19 VPS52 (ENSBGRG00000018459) #20 B3GALT4 (ENSBGRG00000018285) #22 WDR46 (ENSBGRG00000017950) #23 PFDN6 (ENSBGRG00000017800) #24 RGL2 (ENSBGRG00000017715) #25 TAPBP (ENSBGRG00000017312) #26 ZBTB22 (ENSBGRG00000017270) #27 DAXX (ENSBGRG00000017181) #28 SMIM40 (ENSBGRG00000017145) KIFC1 (ENSBGRG00000016981) #29 PHF1 (ENSBGRG00000016743) #30 CUTA (ENSBGRG00000016639) SYNGAP1 (ENSBGRG00000015797) #31 BAK1 (ENSBGRG00000022225) #33 ENSBGRG00000022171 ITPR3 (ENSBGRG00000021666) UQCC2 (ENSBGRG00000021583) Bos_b ANCESTRAL SPECIES 8 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.a.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.o.a #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Cow MODERN SPECIES 15 PSMB8 (ENSBTAG00000003039) TAP1 (ENSBTAG00000008953) PSMB9 (ENSBTAG00000008954) H2B (ENSBTAG00000051545) BOLA-DMB (ENSBTAG00000012451) BOLA-DMA (ENSBTAG00000015730) BRD2 (ENSBTAG00000011074) BOLA-DOA (ENSBTAG00000006490) COL11A2 (ENSBTAG00000000601) #15 RXRB (ENSBTAG00000000602) #16 SLC39A7 (ENSBTAG00000008191) #17 HSD17B8 (ENSBTAG00000020927) #18 RING1 (ENSBTAG00000018884) #19 VPS52 (ENSBTAG00000002643) #20 RPS18 (ENSBTAG00000002648) ##21 B3GALT4 (ENSBTAG00000025669) #22 WDR46 (ENSBTAG00000016824) #23 PFDN6 (ENSBTAG00000010723) #24 RGL2 (ENSBTAG00000016827) #25 TAPBP (ENSBTAG00000016828) #26 ZBTB22 (ENSBTAG00000016829) #27 DAXX (ENSBTAG00000016830) #28 KIFC1 (ENSBTAG00000001631) #29 PHF1 (ENSBTAG00000001634) #30 CUTA (ENSBTAG00000001635) SYNGAP1 (ENSBTAG00000020975) #31 ZBTB9 (ENSBTAG00000038888) #32 BAK1 (ENSBTAG00000000428) #33 GGNBP1 (ENSBTAG00000011057) ITPR3 (ENSBTAG00000013245) UQCC2 (ENSBTAG00000054726) Hybrid Bos Indicus MODERN SPECIES 15 PSMB8 (ENSBIXG00005014824) TAP1 (ENSBIXG00005014801) PSMB9 (ENSBIXG00005014787) ENSBIXG00005014770 HLA-DMB (ENSBIXG00005014762) HLA-DMA (ENSBIXG00005014743) BRD2 (ENSBIXG00005014704) HLA-DOA (ENSBIXG00005014640) COL11A2 (ENSBIXG00005014598) #15 RXRB (ENSBIXG00005014520) #16 SLC39A7 (ENSBIXG00005014473) #17 HSD17B8 (ENSBIXG00005001937) #18 RING1 (ENSBIXG00005006128) #19 VPS52 (ENSBIXG00005014413) #20 RPS18 (ENSBIXG00005006736) ##21 B3GALT4 (ENSBIXG00005014338) #22 WDR46 (ENSBIXG00005014304) #23 PFDN6 (ENSBIXG00005014270) #24 RGL2 (ENSBIXG00005014224) #25 TAPBP (ENSBIXG00005006125) #26 ZBTB22 (ENSBIXG00005014096) #27 DAXX (ENSBIXG00005001833) #28 SMIM40 (ENSBIXG00005014070) KIFC1 (ENSBIXG00005001822) #29 PHF1 (ENSBIXG00005007493) #30 CUTA (ENSBIXG00005001757) SYNGAP1 (ENSBIXG00005013877) #31 ZBTB9 (ENSBIXG00005013532) #32 BAK1 (ENSBIXG00005001624) #33 ENSBIXG00005013470 ITPR3 (ENSBIXG00005013427) American bison MODERN SPECIES 3186 PSMB8 (ENSBBBG00000015244) TAP1 (ENSBBBG00000015234) PSMB9 (ENSBBBG00000003777) ENSBBBG00000015200 HLA-DMB (ENSBBBG00000008914) HLA-DMA (ENSBBBG00000015169) BRD2 (ENSBBBG00000002785) HLA-DOA (ENSBBBG00000015112) ENSBBBG00000003746 #15 RXRB (ENSBBBG00000015089) #16 SLC39A7 (ENSBBBG00000014969) #17 HSD17B8 (ENSBBBG00000003696) #18 RING1 (ENSBBBG00000003692) #19 VPS52 (ENSBBBG00000003598) #20 RPS18 (ENSBBBG00000003625) ##21 B3GALT4 (ENSBBBG00000003638) #22 WDR46 (ENSBBBG00000014933) #23 PFDN6 (ENSBBBG00000014925) #24 RGL2 (ENSBBBG00000000845) #25 TAPBP (ENSBBBG00000000871) #26 ZBTB22 (ENSBBBG00000000917) #27 DAXX (ENSBBBG00000000938) #28 SMIM40 (ENSBBBG00000000988) ENSBBBG00000000992 KIFC1 (ENSBBBG00000001000) #29 PHF1 (ENSBBBG00000001027) #30 CUTA (ENSBBBG00000001096) SYNGAP1 (ENSBBBG00000001211) #31 ZBTB9 (ENSBBBG00000014478) #32 BAK1 (ENSBBBG00000014474) #33 ENSBBBG00000014460 Siberian musk deer MODERN SPECIES 355 HLA-DOB (ENSMMSG00000022133) TAP1 (ENSMMSG00000022156) PSMB8 (ENSMMSG00000022217) PSMB9 (ENSMMSG00000022236) HLA-DMB (ENSMMSG00000022257) HLA-DMA (ENSMMSG00000022283) BRD2 (ENSMMSG00000022334) HLA-DOA (ENSMMSG00000022389) COL11A2 (ENSMMSG00000022475) #15 RXRB (ENSMMSG00000023046) #16 SLC39A7 (ENSMMSG00000023058) #17 HSD17B8 (ENSMMSG00000023067) #18 RING1 (ENSMMSG00000023081) #19 VPS52 (ENSMMSG00000023094) #20 RPS18 (ENSMMSG00000023117) ##21 B3GALT4 (ENSMMSG00000023125) #22 WDR46 (ENSMMSG00000023133) #23 ENSMMSG00000023143 #24 RGL2 (ENSMMSG00000023157) #25 TAPBP (ENSMMSG00000023185) #26 ZBTB22 (ENSMMSG00000023203) #27 DAXX (ENSMMSG00000023208) #28 SMIM40 (ENSMMSG00000023214) KIFC1 (ENSMMSG00000023227) #29 PHF1 (ENSMMSG00000023287) #30 CUTA (ENSMMSG00000023317) SYNGAP1 (ENSMMSG00000023343) #31 ZBTB9 (ENSMMSG00000023399) #32 BAK1 (ENSMMSG00000023407) #33 ENSMMSG00000023420 ITPR3 (ENSMMSG00000023429) Yarkand deer MODERN SPECIES 30 ENSCHYG00000004358 ENSCHYG00000004368 HLA-DOB (ENSCHYG00000004391) TAP2 (ENSCHYG00000004426) PSMB8 (ENSCHYG00000004467) TAP1 (ENSCHYG00000004483) ENSCHYG00000004500 HLA-DMB (ENSCHYG00000004514) HLA-DMA (ENSCHYG00000004520) BRD2 (ENSCHYG00000004539) HLA-DOA (ENSCHYG00000004561) COL11A2 (ENSCHYG00000004624) #15 RING1 (ENSCHYG00000004682) #19 VPS52 (ENSCHYG00000004695) #20 RPS18 (ENSCHYG00000004733) ##21 B3GALT4 (ENSCHYG00000004743) #22 WDR46 (ENSCHYG00000004759) #23 PFDN6 (ENSCHYG00000004871) #24 RGL2 (ENSCHYG00000004896) #25 TAPBP (ENSCHYG00000004933) #26 ZBTB22 (ENSCHYG00000004990) #27 DAXX (ENSCHYG00000005013) #28 SMIM40 (ENSCHYG00000005026) KIFC1 (ENSCHYG00000005051) #29 PHF1 (ENSCHYG00000005145) #30 CUTA (ENSCHYG00000005349) SYNGAP1 (ENSCHYG00000005513) #31 ZBTB9 (ENSCHYG00000005656) #32 BAK1 (ENSCHYG00000005696) #33 ENSCHYG00000005749 ITPR3 (ENSCHYG00000005797) Camelidae ANCESTRAL SPECIES 13 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Arabian camel MODERN SPECIES 12 TAP1 (ENSCDRG00005021477) PSMB9 (ENSCDRG00005021480) HLA-DMB (ENSCDRG00005021484) HLA-DMA (ENSCDRG00005021489) BRD2 (ENSCDRG00005021496) HLA-DOA (ENSCDRG00005021502) HLA-DPA1 (ENSCDRG00005021505) #14 HLA-DPB1 (ENSCDRG00005021506) #13 COL11A2 (ENSCDRG00005021542) #15 RXRB (ENSCDRG00005021632) #16 SLC39A7 (ENSCDRG00005021641) #17 HSD17B8 (ENSCDRG00005021643) #18 RING1 (ENSCDRG00005021646) #19 VPS52 (ENSCDRG00005021653) #20 RPS18 (ENSCDRG00005021659) ##21 B3GALT4 (ENSCDRG00005021661) #22 WDR46 (ENSCDRG00005021663) #23 PFDN6 (ENSCDRG00005021673) #24 RGL2 (ENSCDRG00005021678) #25 TAPBP (ENSCDRG00005021686) #26 ZBTB22 (ENSCDRG00005021690) #27 DAXX (ENSCDRG00005021691) #28 SMIM40 (ENSCDRG00005021695) KIFC1 (ENSCDRG00005021698) #29 PHF1 (ENSCDRG00005021700) #30 CUTA (ENSCDRG00005021706) SYNGAP1 (ENSCDRG00005021714) #31 ZBTB9 (ENSCDRG00005021729) #32 BAK1 (ENSCDRG00005021730) #33 ENSCDRG00005021734 ITPR3 (ENSCDRG00005021737) Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Carnivora ANCESTRAL SPECIES 4 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Caniformia ANCESTRAL SPECIES 3 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Caniformia_b ANCESTRAL SPECIES 6 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Ursidae ANCESTRAL SPECIES 37 ENSGT00940000159897 ENSGT00950000183198.c.a.b.b.j ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.w ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.d #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Ursus ANCESTRAL SPECIES 53 ENSGT00940000159023 ENSGT00940000159897 ENSGT00950000183198.c.a.b.b.j ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b.w ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.d #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 American black bear MODERN SPECIES 175 HLA-DOA (ENSUAMG00000026886) ENSUAMG00000026889 #14 COL11A2 (ENSUAMG00000026897) #15 RXRB (ENSUAMG00000026918) #16 SLC39A7 (ENSUAMG00000026920) #17 HSD17B8 (ENSUAMG00000026922) #18 RING1 (ENSUAMG00000026924) #19 VPS52 (ENSUAMG00000026926) #20 RPS18 (ENSUAMG00000026928) ##21 B3GALT4 (ENSUAMG00000026933) #22 WDR46 (ENSUAMG00000026936) #23 PFDN6 (ENSUAMG00000026943) #24 RGL2 (ENSUAMG00000026945) #25 TAPBP (ENSUAMG00000026951) #26 ZBTB22 (ENSUAMG00000026952) #27 DAXX (ENSUAMG00000026953) #28 SMIM40 (ENSUAMG00000026954) KIFC1 (ENSUAMG00000026955) #29 PHF1 (ENSUAMG00000026961) #30 CUTA (ENSUAMG00000026966) SYNGAP1 (ENSUAMG00000000065) #31 ZBTB9 (ENSUAMG00000000601) #32 BAK1 (ENSUAMG00000000611) #33 ENSUAMG00000000617 ITPR3 (ENSUAMG00000000807) Giant Panda MODERN SPECIES 15 TAP1 (ENSAMEG00000001976) PSMB9 (ENSAMEG00000001961) ENSAMEG00000027435 HLA-DMB (ENSAMEG00000001952) BRD2 (ENSAMEG00000001926) HLA-DOA (ENSAMEG00000001908) HLA-DPA1 (ENSAMEG00000001901) #14 ENSAMEG00000001900 #13 COL11A2 (ENSAMEG00000001744) #15 RXRB (ENSAMEG00000001719) #16 SLC39A7 (ENSAMEG00000001707) #17 HSD17B8 (ENSAMEG00000001698) #18 RING1 (ENSAMEG00000001680) #19 VPS52 (ENSAMEG00000001640) #20 RPS18 (ENSAMEG00000001623) ##21 B3GALT4 (ENSAMEG00000019752) #22 WDR46 (ENSAMEG00000001583) #23 PFDN6 (ENSAMEG00000001576) #24 RGL2 (ENSAMEG00000001533) #25 TAPBP (ENSAMEG00000001518) #26 ZBTB22 (ENSAMEG00000019741) #27 DAXX (ENSAMEG00000001484) #28 SMIM40 (ENSAMEG00000030691) KIFC1 (ENSAMEG00000001458) #29 PHF1 (ENSAMEG00000001427) #30 CUTA (ENSAMEG00000001407) SYNGAP1 (ENSAMEG00000001379) #31 ZBTB9 (ENSAMEG00000019731) #32 ENSAMEG00000001363 #33 ENSAMEG00000001355 ITPR3 (ENSAMEG00000001124) Mustelinae ANCESTRAL SPECIES 65 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000164565 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Ferret MODERN SPECIES 318 PSMB9 (ENSMPUG00000001940) HLA-DMB (ENSMPUG00000001943) HLA-DMA (ENSMPUG00000001944) ENSMPUG00000001954 BRD2 (ENSMPUG00000001955) HLA-DOA (ENSMPUG00000001958) ENSMPUG00000001959 HLA-DPA1 (ENSMPUG00000001961) #14 ENSMPUG00000001964 #13 COL11A2 (ENSMPUG00000001968) #15 RXRB (ENSMPUG00000002273) #16 SLC39A7 (ENSMPUG00000002276) #17 RING1 (ENSMPUG00000002279) #19 VPS52 (ENSMPUG00000002300) #20 RPS18 (ENSMPUG00000002306) ##21 B3GALT4 (ENSMPUG00000018786) #22 ENSMPUG00000002317 #23 PFDN6 (ENSMPUG00000002364) #24 RGL2 (ENSMPUG00000002376) #25 TAPBP (ENSMPUG00000002383) #26 ZBTB22 (ENSMPUG00000018787) #27 DAXX (ENSMPUG00000002405) #28 KIFC1 (ENSMPUG00000002409) #29 PHF1 (ENSMPUG00000002414) #30 CUTA (ENSMPUG00000002420) SYNGAP1 (ENSMPUG00000002431) #31 ZBTB9 (ENSMPUG00000018789) #32 BAK1 (ENSMPUG00000002438) #33 ENSMPUG00000002455 ENSMPUG00000002458 ENSMPUG00000002462 American mink MODERN SPECIES 258 ENSNVIG00000013094 #19 VPS52 (ENSNVIG00000013051) #20 RPS18 (ENSNVIG00000013029) ##21 B3GALT4 (ENSNVIG00000013023) #22 WDR46 (ENSNVIG00000013009) #23 PFDN6 (ENSNVIG00000012998) #24 RGL2 (ENSNVIG00000012961) #25 TAPBP (ENSNVIG00000012929) #26 ZBTB22 (ENSNVIG00000012910) #27 DAXX (ENSNVIG00000012888) #28 SMIM40 (ENSNVIG00000012878) ENSNVIG00000012872 PHF1 (ENSNVIG00000012814) #30 CUTA (ENSNVIG00000012780) SYNGAP1 (ENSNVIG00000012712) #31 ZBTB9 (ENSNVIG00000012705) #32 BAK (ENSNVIG00000012694) #33 ENSNVIG00000012687 ITPR3 (ENSNVIG00000012548) Canidae ANCESTRAL SPECIES 6 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815.g.b #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000164565 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Canis_lupus ANCESTRAL SPECIES 11 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815.g.b #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512.e.b #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Dingo MODERN SPECIES 276 TAP1 (ENSCAFG00020002523) PSMB9 (ENSCAFG00020002528) HLA-DMB (ENSCAFG00020002532) HLA-DMA (ENSCAFG00020002536) BRD2 (ENSCAFG00020002542) HLA-DOA (ENSCAFG00020002545) ENSCAFG00020002592 #13 ENSCAFG00020003072 #15 ENSCAFG00020003093 #15 RXRB (ENSCAFG00020003098) #16 SLC39A7 (ENSCAFG00020003166) #17 HSD17B8 (ENSCAFG00020003175) #18 RING1 (ENSCAFG00020003221) #19 ENSCAFG00020003224 #20 RPS18 (ENSCAFG00020003254) ##21 B3GALT4 (ENSCAFG00020003269) #22 WDR46 (ENSCAFG00020003271) #23 ENSCAFG00020003316 #24 RGL2 (ENSCAFG00020003330) #25 TAPBP (ENSCAFG00020003337) #26 ZBTB22 (ENSCAFG00020003345) #27 DAXX (ENSCAFG00020003346) #28 SMIM40 (ENSCAFG00020003364) PHF1 (ENSCAFG00020003366) #30 ENSCAFG00020003379 #30 CUTA (ENSCAFG00020003385) SYNGAP1 (ENSCAFG00020003455) #31 ZBTB9 (ENSCAFG00020003798) #32 BAK1 (ENSCAFG00020003807) #33 ENSCAFG00020003809 ENSCAFG00020003859 Dog MODERN SPECIES 3 TAP2 (ENSCAFG00845017879) PSMB8 (ENSCAFG00845018353) PSMB9 (ENSCAFG00845018485) DLA-DMB (ENSCAFG00845018536) DLA-DMA (ENSCAFG00845018613) BRD2 (ENSCAFG00845018726) DLA-DOA (ENSCAFG00845018933) ENSCAFG00845019114 #13 COL11A2 (ENSCAFG00845019587) #15 RXRB (ENSCAFG00845020447) #16 SLC39A7 (ENSCAFG00845020536) #17 HSD17B8 (ENSCAFG00845020603) #18 RING1 (ENSCAFG00845020668) #19 VPS52 (ENSCAFG00845020730) #20 RPS18 (ENSCAFG00845020845) ##21 B3GALT4 (ENSCAFG00845020962) #22 WDR46 (ENSCAFG00845021010) #23 PFDN6 (ENSCAFG00845021180) #24 RGL2 (ENSCAFG00845021267) #25 TAPBP (ENSCAFG00845021421) #26 ZBTB22 (ENSCAFG00845021534) #27 DAXX (ENSCAFG00845021574) #28 SMIM40 (ENSCAFG00845021695) KIFC1 (ENSCAFG00845021754) #29 PHF1 (ENSCAFG00845021851) #30 CUTA (ENSCAFG00845022043) SYNGAP1 (ENSCAFG00845022368) #31 ZBTB9 (ENSCAFG00845023405) #32 ENSCAFG00845023466 BAK1 (ENSCAFG00845023547) #33 ENSCAFG00845023632 Red fox MODERN SPECIES 7 PSMB8 (ENSVVUG00000025115) TAP1 (ENSVVUG00000025116) PSMB9 (ENSVVUG00000025119) HLA-DMB (ENSVVUG00000025122) HLA-DMA (ENSVVUG00000025127) BRD2 (ENSVVUG00000025130) HLA-DOA (ENSVVUG00000025133) HLA-DPA1 (ENSVVUG00000025137) #14 ENSVVUG00000025174 #13 RXRB (ENSVVUG00000025262) #16 SLC39A7 (ENSVVUG00000025265) #17 HSD17B8 (ENSVVUG00000025268) #18 RING1 (ENSVVUG00000025271) #19 ENSVVUG00000025286 #20 RPS18 (ENSVVUG00000025443) ##21 B3GALT4 (ENSVVUG00000025447) #22 WDR46 (ENSVVUG00000025460) #23 PFDN6 (ENSVVUG00000025545) #24 RGL2 (ENSVVUG00000025551) #25 TAPBP (ENSVVUG00000025586) #26 ZBTB22 (ENSVVUG00000025590) #27 DAXX (ENSVVUG00000025591) #28 SMIM40 (ENSVVUG00000025592) ENSVVUG00000025594 PHF1 (ENSVVUG00000025614) #30 CUTA (ENSVVUG00000025622) SYNGAP1 (ENSVVUG00000025640) #31 ZBTB9 (ENSVVUG00000025646) #32 BAK1 (ENSVVUG00000025650) #33 ENSVVUG00000025665 ENSVVUG00000025902 Felidae DUPLICATION Felidae ANCESTRAL SPECIES 54 ENSGT00390000012691.d ##21 ENSGT00940000161798.g #22 Cat MODERN SPECIES 236 ENSFCAG00000040910 ENSFCAG00000041486 ENSFCAG00000009696 ENSFCAG00000009697 ENSFCAG00000012247 #14 ENSFCAG00000041523 #13 ENSFCAG00000047214 #15 ENSFCAG00000046454 #15 ENSFCAG00000042526 #16 ENSFCAG00000050544 ENSFCAG00000046098 #17 HSD17B8 (ENSFCAG00000006986) #18 ENSFCAG00000041942 #19 VPS52 (ENSFCAG00000004011) #20 ENSFCAG00000041843 ##21 ENSFCAG00000052529 #22 ENSFCAG00000051171 #23 ENSFCAG00000028199 #24 ENSFCAG00000029182 #25 ENSFCAG00000043390 #26 ENSFCAG00000049571 #27 DAXX (ENSFCAG00000004020) #28 ENSFCAG00000053744 ENSFCAG00000052131 ENSFCAG00000041443 #29 ENSFCAG00000040474 ENSFCAG00000009202 ENSFCAG00000045700 ENSFCAG00000043821 ENSFCAG00000042456 ENSFCAG00000044069 Panthera ANCESTRAL SPECIES 99 ENSGT00390000012691.d ##21 ENSGT00940000161798.g #22 Tiger MODERN SPECIES 415 PSMB9 (ENSPTIG00000006050) HLA-DMB (ENSPTIG00000006035) HLA-DMA (ENSPTIG00000006011) ENSPTIG00000006002 BRD2 (ENSPTIG00000005977) HLA-DOA (ENSPTIG00000005964) HLA-DPA1 (ENSPTIG00000005948) #14 HLA-DPB1 (ENSPTIG00000005931) #13 COL11A2 (ENSPTIG00000005735) #15 RXRB (ENSPTIG00000005607) #16 SLC39A7 (ENSPTIG00000005581) #17 HSD17B8 (ENSPTIG00000005554) #18 RING1 (ENSPTIG00000005545) #19 VPS52 (ENSPTIG00000005504) #20 RPS18 (ENSPTIG00000005481) ##21 B3GALT4 (ENSPTIG00000005451) #22 WDR46 (ENSPTIG00000005439) #23 PFDN6 (ENSPTIG00000005409) #24 RGL2 (ENSPTIG00000005355) #25 TAPBP (ENSPTIG00000005317) #26 DAXX (ENSPTIG00000005244) #28 KIFC1 (ENSPTIG00000005208) #29 PHF1 (ENSPTIG00000005011) #30 CUTA (ENSPTIG00000005095) SYNGAP1 (ENSPTIG00000004711) #31 ZBTB9 (ENSPTIG00000009189) #32 BAK1 (ENSPTIG00000004514) #33 ENSPTIG00000004464 ITPR3 (ENSPTIG00000003549) UQCC2 (ENSPTIG00000003455) IP6K3 (ENSPTIG00000003356) Felidae ANCESTRAL SPECIES 5 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390.p #13 ENSGT00940000162390.q #13 ENSGT00940000159762.cc #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798.h #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT01000000221634 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 Panthera ANCESTRAL SPECIES 7 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390.p #13 ENSGT00940000159762.cc #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798.h #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT01000000221634 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.k #33 ENSGT00390000006663 Panthera_a ANCESTRAL SPECIES 4 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390.p #13 ENSGT00940000159762.cc #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798.h #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT01000000221634 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A.k #33 ENSGT00390000006663 leopard MODERN SPECIES 30 HLA-DMB (ENSPPRG00000004964) HLA-DMA (ENSPPRG00000004582) ENSPPRG00000003175 ENSPPRG00000003003 ENSPPRG00000002715 HLA-DOA (ENSPPRG00000002484) HLA-DPA1 (ENSPPRG00000002267) #14 HLA-DPB1 (ENSPPRG00000002022) #13 COL11A2 (ENSPPRG00000001194) #15 RXRB (ENSPPRG00000010222) #16 SLC39A7 (ENSPPRG00000009227) #17 HSD17B8 (ENSPPRG00000008960) #18 RING1 (ENSPPRG00000008873) #19 VPS52 (ENSPPRG00000007986) #20 RPS18 (ENSPPRG00000006936) ##21 B3GALT4 (ENSPPRG00000006033) #22 WDR46 (ENSPPRG00000005881) #23 PFDN6 (ENSPPRG00000005109) #24 RGL2 (ENSPPRG00000004409) #25 TAPBP (ENSPPRG00000003578) #26 ZBTB22 (ENSPPRG00000020462) #27 DAXX (ENSPPRG00000002274) #28 KIFC1 (ENSPPRG00000000899) #29 PHF1 (ENSPPRG00000000222) #30 CUTA (ENSPPRG00000023270) SYNGAP1 (ENSPPRG00000022184) #31 ZBTB9 (ENSPPRG00000020032) #32 ENSPPRG00000013423 ENSPPRG00000012994 #33 ENSPPRG00000012361 ITPR3 (ENSPPRG00000011688) lion MODERN SPECIES 5 PSMB9 (ENSPLOG00000006713) ENSPLOG00000006735 HLA-DMB (ENSPLOG00000006753) HLA-DMA (ENSPLOG00000006786) BRD2 (ENSPLOG00000006871) HLA-DOA (ENSPLOG00000006926) HLA-DPA1 (ENSPLOG00000006949) #14 ENSPLOG00000007166 #13 COL11A2 (ENSPLOG00000007928) #15 RXRB (ENSPLOG00000009094) #16 SLC39A7 (ENSPLOG00000009206) #17 HSD17B8 (ENSPLOG00000009241) #18 RING1 (ENSPLOG00000009313) #19 VPS52 (ENSPLOG00000009344) #20 RPS18 (ENSPLOG00000009471) ##21 B3GALT4 (ENSPLOG00000009525) #22 WDR46 (ENSPLOG00000009542) #23 PFDN6 (ENSPLOG00000009614) #24 RGL2 (ENSPLOG00000009682) #25 TAPBP (ENSPLOG00000009777) #26 ZBTB22 (ENSPLOG00000009838) #27 DAXX (ENSPLOG00000009856) #28 SMIM40 (ENSPLOG00000009910) ENSPLOG00000009926 KIFC1 (ENSPLOG00000009952) #29 PHF1 (ENSPLOG00000010046) #30 CUTA (ENSPLOG00000010187) SYNGAP1 (ENSPLOG00000010427) #31 ZBTB9 (ENSPLOG00000011169) #32 ENSPLOG00000011229 #33 ENSPLOG00000011334 Cat MODERN SPECIES 236 ENSFCAG00000042456 ENSFCAG00000044069 ENSFCAG00000050701 ENSFCAG00000045369 ENSFCAG00000009442 ENSFCAG00000042841 ENSFCAG00000042732 ENSFCAG00000044012 #14 ENSFCAG00000041258 #13 COL11A2 (ENSFCAG00000004005) #15 ENSFCAG00000006981 #16 ENSFCAG00000006984 #17 ENSFCAG00000043560 #20 ENSFCAG00000004010 #19 ENSFCAG00000045696 ##21 B3GALT4 (ENSFCAG00000004015) #22 WDR46 (ENSFCAG00000004016) #23 ENSFCAG00000046037 #24 ENSFCAG00000042019 #25 ENSFCAG00000004017 #26 ENSFCAG00000050206 #27 ENSFCAG00000046536 ENSFCAG00000047002 KIFC1 (ENSFCAG00000013653) #29 PHF1 (ENSFCAG00000013654) #30 CUTA (ENSFCAG00000013655) SYNGAP1 (ENSFCAG00000013656) #31 ZBTB9 (ENSFCAG00000027926) #32 BAK1 (ENSFCAG00000032638) #33 GGNBP1 (ENSFCAG00000022517) ITPR3 (ENSFCAG00000013659) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Equus ANCESTRAL SPECIES 10 ENSGT00940000157293 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00860000136081 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Horse MODERN SPECIES 12 TAP2 (ENSECAG00000007152) PSMB9 (ENSECAG00000016898) PSMB8 (ENSECAG00000018887) TAP1 (ENSECAG00000022610) HLA-DMB (ENSECAG00000021796) HLA-DMA (ENSECAG00000003669) ENSECAG00000042051 BRD2 (ENSECAG00000012089) HLA-DOA (ENSECAG00000006603) COL11A2 (ENSECAG00000029028) #15 RXRB (ENSECAG00000023041) #16 SLC39A7 (ENSECAG00000004794) #17 HSD17B8 (ENSECAG00000058465) #18 RING1 (ENSECAG00000013736) #19 VPS52 (ENSECAG00000019702) #20 B3GALT4 (ENSECAG00000052593) #22 WDR46 (ENSECAG00000016548) #23 PFDN6 (ENSECAG00000055205) #24 RGL2 (ENSECAG00000000906) #25 TAPBP (ENSECAG00000015448) #26 ZBTB22 (ENSECAG00000019536) #27 DAXX (ENSECAG00000021055) #28 KIFC1 (ENSECAG00000024196) #29 PHF1 (ENSECAG00000001042) #30 CUTA (ENSECAG00000016206) SYNGAP1 (ENSECAG00000020868) #31 ZBTB9 (ENSECAG00000001767) #32 GGNBP1 (ENSECAG00000004978) BAK1 (ENSECAG00000023902) #33 ITPR3 (ENSECAG00000007328) ENSECAG00000031664 Donkey MODERN SPECIES 28 TAP2 (ENSEASG00005020743) PSMB8 (ENSEASG00005020748) TAP1 (ENSEASG00005020750) PSMB9 (ENSEASG00005020754) HLA-DMB (ENSEASG00005020759) HLA-DMA (ENSEASG00005020764) ENSEASG00005032605 BRD2 (ENSEASG00005020770) HLA-DOA (ENSEASG00005020773) COL11A2 (ENSEASG00005030115) #15 RXRB (ENSEASG00005020792) #16 SLC39A7 (ENSEASG00005020798) #17 RING1 (ENSEASG00005020805) #19 VPS52 (ENSEASG00005020809) #20 RPS18 (ENSEASG00005020817) ##21 B3GALT4 (ENSEASG00005035058) #22 WDR46 (ENSEASG00005020823) #23 PFDN6 (ENSEASG00005035417) #24 RGL2 (ENSEASG00005020835) #25 ZBTB22 (ENSEASG00005020850) #27 DAXX (ENSEASG00005020852) #28 SMIM40 (ENSEASG00005020856) KIFC1 (ENSEASG00005020860) #29 PHF1 (ENSEASG00005020866) #30 ENSEASG00005020871 SYNGAP1 (ENSEASG00005020883) #31 ZBTB9 (ENSEASG00005036178) #32 BAK1 (ENSEASG00005020896) #33 ENSEASG00005020902 ITPR3 (ENSEASG00005020906) UQCC2 (ENSEASG00005020919) Chiroptera ANCESTRAL SPECIES 3 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498 #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Greater horseshoe bat MODERN SPECIES 21 PSMB8 (ENSRFEG00010012709) TAP1 (ENSRFEG00010012779) PSMB9 (ENSRFEG00010012800) ENSRFEG00010012948 BRD2 (ENSRFEG00010013276) HLA-DOA (ENSRFEG00010013359) HLA-DPA1 (ENSRFEG00010013424) #14 HLA-DPB1 (ENSRFEG00010013529) #13 COL11A2 (ENSRFEG00010013940) #15 RXRB (ENSRFEG00010014125) #16 SLC39A7 (ENSRFEG00010014223) #17 HSD17B8 (ENSRFEG00010014277) #18 RING1 (ENSRFEG00010014424) #19 VPS52 (ENSRFEG00010014510) #20 ENSRFEG00010014573 ##21 B3GALT4 (ENSRFEG00010014737) #22 WDR46 (ENSRFEG00010014756) #23 ENSRFEG00010014998 #24 RGL2 (ENSRFEG00010015178) #25 TAPBP (ENSRFEG00010015262) #26 ZBTB22 (ENSRFEG00010015390) #27 DAXX (ENSRFEG00010015408) #28 SMIM40 (ENSRFEG00010015468) ENSRFEG00010015490 KIFC1 (ENSRFEG00010015527) #29 PHF1 (ENSRFEG00010015595) #30 CUTA (ENSRFEG00010015764) SYNGAP1 (ENSRFEG00010015951) #31 ZBTB9 (ENSRFEG00010016671) #32 BAK1 (ENSRFEG00010016690) #33 ENSRFEG00010016790 Microbat MODERN SPECIES 1613 RXRB (ENSMLUG00000014163) #16 SLC39A7 (ENSMLUG00000014165) #17 HSD17B8 (ENSMLUG00000027777) #18 RING1 (ENSMLUG00000024412) #19 VPS52 (ENSMLUG00000007294) #20 ENSMLUG00000007360 ##21 B3GALT4 (ENSMLUG00000007384) #22 WDR46 (ENSMLUG00000007398) #23 PFDN6 (ENSMLUG00000007450) #24 RGL2 (ENSMLUG00000007475) #25 TAPBP (ENSMLUG00000007536) #26 ZBTB22 (ENSMLUG00000017554) #27 DAXX (ENSMLUG00000007551) #28 KIFC1 (ENSMLUG00000012031) #29 PHF1 (ENSMLUG00000012046) #30 CUTA (ENSMLUG00000012064) SYNGAP1 (ENSMLUG00000012071) #31 ENSMLUG00000000948 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498.r #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 ENSGT00940000160955 Afrotheria ANCESTRAL SPECIES 83 ENSGT00940000159023 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498.r #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 ENSGT00520000057851 ENSGT00520000061205 Afrotheria_a ANCESTRAL SPECIES 84 ENSGT00940000159897 ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000162112 ENSGT00940000162498.r #14 ENSGT00940000162390 #13 ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00390000012691.d ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 ENSGT00940000160955 Elephant MODERN SPECIES 14 PSMB8 (ENSLAFG00000003213) TAP1 (ENSLAFG00000003214) PSMB9 (ENSLAFG00000025736) HLA-DMB (ENSLAFG00000004768) HLA-DMA (ENSLAFG00000005738) BRD2 (ENSLAFG00000016104) HLA-DOA (ENSLAFG00000014863) ENSLAFG00000029575 #13 COL11A2 (ENSLAFG00000009548) #15 RXRB (ENSLAFG00000002141) #16 SLC39A7 (ENSLAFG00000002138) #17 HSD17B8 (ENSLAFG00000030087) #18 RING1 (ENSLAFG00000021706) #19 VPS52 (ENSLAFG00000004472) #20 ENSLAFG00000032173 ##21 B3GALT4 (ENSLAFG00000025898) #22 WDR46 (ENSLAFG00000012958) #23 PFDN6 (ENSLAFG00000012967) #24 RGL2 (ENSLAFG00000022913) #25 TAPBP (ENSLAFG00000032520) #26 ZBTB22 (ENSLAFG00000018510) #27 DAXX (ENSLAFG00000027595) #28 PHF1 (ENSLAFG00000005870) #30 CUTA (ENSLAFG00000005876) SYNGAP1 (ENSLAFG00000007848) #31 ZBTB9 (ENSLAFG00000020986) #32 BAK1 (ENSLAFG00000001446) #33 ENSLAFG00000001449 ITPR3 (ENSLAFG00000022216) UQCC2 (ENSLAFG00000008206) IP6K3 (ENSLAFG00000012157) Hyrax MODERN SPECIES 1096 VPS52 (ENSPCAG00000005741) #20 RPS18 (ENSPCAG00000005854) ##21 B3GALT4 (ENSPCAG00000005914) #22 WDR46 (ENSPCAG00000005923) #23 PFDN6 (ENSPCAG00000006019) #24 RGL2 (ENSPCAG00000006055) #25 TAPBP (ENSPCAG00000006167) #26 ZBTB22 (ENSPCAG00000006256) #27 ENSPCAG00000006326 #28 Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000159023 ENSGT00940000159897 ENSGT00980000198488.n.y.a.a ENSGT00980000198488.n.y.b.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT01100000263519.A.b.a.b ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000162498 #14 ENSGT00940000164042.b ENSGT00940000160997 ENSGT00980000198488.n.y.b.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT01100000263519.A.b.a.b ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 ENSGT00510000048041 ENSGT00940000160887 Diprotodontia ANCESTRAL SPECIES 44 ENSGT00980000198488.n.y.b.b ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT01100000263519.A.b.a.b ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000164565 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Diprotodontia_a ANCESTRAL SPECIES 49 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000010512 #24 ENSGT00940000161403 #25 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00920000150736 ENSGT00940000164565 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT01090000260100.A #33 ENSGT00390000006663 ENSGT00940000157078 Common wonbat MODERN SPECIES 1047 ENSVURG00010012508 ENSVURG00010012584 ENSVURG00010014250 OSCAR (ENSVURG00010014253) ENSVURG00010014277 ENSVURG00010014320 HLA-DMB (ENSVURG00010014847) HLA-DMA (ENSVURG00010014861) BRD2 (ENSVURG00010014869) ENSVURG00010014883 #15 RXRB (ENSVURG00010014890) #16 ENSVURG00010014948 RING1 (ENSVURG00010014982) #19 VPS52 (ENSVURG00010015001) #20 RPS18 (ENSVURG00010015031) ##21 B3GALT4 (ENSVURG00010015041) #22 WDR46 (ENSVURG00010015047) #23 PFDN6 (ENSVURG00010015063) #24 RGL2 (ENSVURG00010015079) #25 ENSVURG00010015107 #26 ZBTB22 (ENSVURG00010015135) #27 DAXX (ENSVURG00010015143) #28 SMIM40 (ENSVURG00010015158) ENSVURG00010015167 PHF1 (ENSVURG00010015194) #30 CUTA (ENSVURG00010015262) SYNGAP1 (ENSVURG00010015312) #31 BAK1 (ENSVURG00010016019) #33 ENSVURG00010016031 ITPR3 (ENSVURG00010016061) ENSVURG00010016152 koala MODERN SPECIES 76 VPS52 (ENSPCIG00000030007) #20 RPS18 (ENSPCIG00000030008) ##21 B3GALT4 (ENSPCIG00000030043) #22 WDR46 (ENSPCIG00000030010) #23 PFDN6 (ENSPCIG00000030045) #24 RGL2 (ENSPCIG00000030063) #25 ZBTB22 (ENSPCIG00000030117) #27 DAXX (ENSPCIG00000030119) #28 SMIM40 (ENSPCIG00000030125) ENSPCIG00000030126 PHF1 (ENSPCIG00000030129) #30 CUTA (ENSPCIG00000030134) SYNGAP1 (ENSPCIG00000030140) #31 ZBTB9 (ENSPCIG00000030149) #32 BAK1 (ENSPCIG00000035728) #33 ENSPCIG00000014453 ITPR3 (ENSPCIG00000016569) ENSPCIG00000035005 Wallaby MODERN SPECIES 2142 VPS52 (ENSMEUG00000016767) #20 RPS18 (ENSMEUG00000016770) ##21 B3GALT4 (ENSMEUG00000016772) #22 WDR46 (ENSMEUG00000016776) #23 PFDN6 (ENSMEUG00000016778) #24 RGL2 (ENSMEUG00000016779) #25 TAPBP (ENSMEUG00000016780) #26 Tasmanian devil MODERN SPECIES 5 ENSSHAG00000028404 ENPEP (ENSSHAG00000000991) ELOVL6 (ENSSHAG00000032032) EGF (ENSSHAG00000001762) LRIT3 (ENSSHAG00000001837) GAR1 (ENSSHAG00000002161) ENSSHAG00000024052 CFI (ENSSHAG00000002786) ENSSHAG00000004900 MCUB (ENSSHAG00000005322) SEC24B (ENSSHAG00000006487) COL25A1 (ENSSHAG00000006570) ENSSHAG00000029911 ENSSHAG00000008320 #20 ENSSHAG00000008658 ##21 ENSSHAG00000027128 #22 ENSSHAG00000026968 ENSSHAG00000025927 ENSSHAG00000002342 ENSSHAG00000027242 LEF1 (ENSSHAG00000028814) HADH (ENSSHAG00000004987) CYP2U1 (ENSSHAG00000005871) SGMS2 (ENSSHAG00000006786) PAPSS1 (ENSSHAG00000009182) ENSSHAG00000024554 ENSSHAG00000013376 GIMD1 (ENSSHAG00000008117) AIMP1 (ENSSHAG00000000796) TBCK (ENSSHAG00000008473) NPNT (ENSSHAG00000001094) Opossum MODERN SPECIES 1 TAP1 (ENSMODG00000014352) PSMB9 (ENSMODG00000046870) ENSMODG00000050241 MODO-UK (ENSMODG00000014336) ENSMODG00000039629 HLA-DMB (ENSMODG00000014310) ENSMODG00000029544 BRD2 (ENSMODG00000014295) RXRB (ENSMODG00000014249) #16 ENSMODG00000014239 HSD17B8 (ENSMODG00000014232) #18 RING1 (ENSMODG00000014169) #19 ENSMODG00000044597 ENSMODG00000029559 RPS18 (ENSMODG00000014210) ##21 B3GALT4 (ENSMODG00000023738) #22 WDR46 (ENSMODG00000014202) #23 PFDN6 (ENSMODG00000014191) #24 RGL2 (ENSMODG00000014185) #25 TAPBP (ENSMODG00000014159) #26 ZBTB22 (ENSMODG00000014152) #27 DAXX (ENSMODG00000014146) #28 SMIM40 (ENSMODG00000041725) ENSMODG00000014132 PHF1 (ENSMODG00000014121) #30 ENSMODG00000025679 SYNGAP1 (ENSMODG00000014104) #31 ZBTB9 (ENSMODG00000014092) #32 BAK1 (ENSMODG00000014089) #33 ENSMODG00000014083 ITPR3 (ENSMODG00000014069) Platypus MODERN SPECIES 86 RPS18 (ENSOANG00000036297) ##21 B3GALT4 (ENSOANG00000043293) #22 ENSOANG00000049916 #23 PFDN6 (ENSOANG00000046144) #24 RGL2 (ENSOANG00000047778) #25 ENSOANG00000036542 #26 ENSOANG00000042230 #27 ENSOANG00000043668 #28 BRD2 (ENSOANG00000040477) ENSOANG00000045669 ENSOANG00000046093 ENSOANG00000003398 ENSOANG00000044768 PSMB9 (ENSOANG00000041248) TAP1 (ENSOANG00000021021) PSMB8 (ENSOANG00000014541) TAP2 (ENSOANG00000004283) Sauria ANCESTRAL SPECIES 70 ENSGT00940000160997.a.b.a ENSGT00950000183127.b.h.a.a ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00940000164565 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00940000161403 #25 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.d ##21 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 Archelosauria ANCESTRAL SPECIES 53 ENSGT00940000160997.a.a ENSGT00940000161847 ENSGT00950000183127.b.h.a.a ENSGT00940000159762 #15 ENSGT00940000159208.B #16 ENSGT00940000160076 #17 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.d ##21 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00940000161403 #25 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.c.b ##21 Archosauria ANCESTRAL SPECIES 93 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT01030000234972 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Aves ANCESTRAL SPECIES 89 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT01030000234972 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Neognathae ANCESTRAL SPECIES 66 ENSGT00940000160668 #18 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT01030000234972 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Galloanserae ANCESTRAL SPECIES ENSGT00940000161798 #22 Phasianidae ANCESTRAL SPECIES 171 ENSGT01090000260741 ENSGT00940000161798 #22 Phasianidae_b ANCESTRAL SPECIES 155 ENSGT01090000260741 ENSGT00940000161798 #22 Chicken DUPLICATION Chicken DUPLICATION Chicken MODERN SPECIES 87 PFDN6 (ENSGALG00010000166) #24 ENSGALG00010000176 ENSGALG00010000172 #22 ENSGALG00010000188 #22 ENSGALG00010000190 #22 ENSGALG00010000184 #22 Chicken MODERN SPECIES 87 PFDN6 (ENSGALG00010000166) #24 ENSGALG00010000176 ENSGALG00010000172 #22 ENSGALG00010000188 #22 ENSGALG00010000190 #22 ENSGALG00010000184 #22 Chicken DUPLICATION Chicken MODERN SPECIES 87 PFDN6 (ENSGALG00010000166) #24 ENSGALG00010000176 ENSGALG00010000172 #22 ENSGALG00010000188 #22 ENSGALG00010000190 #22 ENSGALG00010000184 #22 Chicken MODERN SPECIES 87 PFDN6 (ENSGALG00010000166) #24 ENSGALG00010000176 ENSGALG00010000172 #22 ENSGALG00010000188 #22 ENSGALG00010000190 #22 ENSGALG00010000184 #22 Japanese quail MODERN SPECIES 337 ENSCJPG00005001530 ENSCJPG00005001528 #22 Anatidae ANCESTRAL SPECIES ENSGT00940000161798 #22 Pink-footed goose MODERN SPECIES 1026 B3GALT4 (ENSABRG00000003855) #22 Neognathae_b ANCESTRAL SPECIES 61 ENSGT00940000160076.k.b #17 ENSGT00940000159208.B #16 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT01030000234972 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Neognathae_c ANCESTRAL SPECIES 61 ENSGT01030000234972 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.c.b ##21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 Kakapo MODERN SPECIES 78 ENSSHBG00005019437 CENPA (ENSSHBG00005019432) PFDN6 (ENSSHBG00005019428) #24 B3GALT4 (ENSSHBG00005019427) #22 ENSSHBG00005019424 ENSSHBG00005019423 RING1 (ENSSHBG00005019419) #19 VPS52 (ENSSHBG00005019412) #20 Passeriformes ANCESTRAL SPECIES 80 ENSGT00940000160076.k.b #17 ENSGT00940000159208.B #16 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Passeriformes_d ANCESTRAL SPECIES 76 ENSGT00940000160076.k.b #17 ENSGT00940000159208.B #16 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Passeriformes_g ANCESTRAL SPECIES 88 ENSGT00940000160076.k.b #17 ENSGT00940000159208.B #16 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Passeroidea ANCESTRAL SPECIES 93 ENSGT00940000160076.k.b #17 ENSGT00940000159208.B #16 ENSGT00940000161022 #19 ENSGT00390000008815 #20 ENSGT00390000012691.c.b ##21 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Zebra finch MODERN SPECIES 99 ENSTGUG00000022955 #20 ENSTGUG00000024411 ##21 ENSTGUG00000027779 ENSTGUG00000026647 #24 ENSTGUG00000023102 #22 ENSTGUG00000024100 #23 RPS18 (ENSTGUG00000025738) ##21 ENSTGUG00000020633 #20 ENSTGUG00000020800 #19 ENSTGUG00000020363 #16 ENSTGUG00000023669 #17 ENSTGUG00000021774 ENSTGUG00000019551 ENSTGUG00000021420 ENSTGUG00000028050 ENSTGUG00000024543 ENSTGUG00000014649 ENSTGUG00000026581 ENSTGUG00000025871 ENSTGUG00000021345 Cryptodira ANCESTRAL SPECIES 65 ENSGT00940000162408 #32 ENSGT00940000158438 #31 ENSGT00390000017030.b.b ENSGT00950000183180.a.b #30 ENSGT00940000161735 #29 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00940000161403 #25 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.c.b ##21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 ENSGT00940000160668 #18 ENSGT00940000160076 #17 ENSGT00940000159208.B #16 ENSGT00940000159762 #15 ENSGT00950000183127.b.h.a.a ENSGT00940000161847 ENSGT00940000153385.b.a.b ENSGT00940000161157 ENSGT00940000160381 ENSGT01100000263517.a.a ENSGT00940000159897 Testudinoidea ANCESTRAL SPECIES 54 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT00950000185231 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00940000161403 #25 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.c.b ##21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 ENSGT00940000160668 #18 ENSGT00940000160076 #17 ENSGT00940000159208.B #16 ENSGT00940000159762 #15 ENSGT00950000183127.b.h.a.a.b ENSGT00950000183127.b.h.a.a.a.a ENSGT00940000161847.c.a.a ENSGT00940000153385.b.a.b ENSGT00940000161157 ENSGT00940000160381 Testudinidae ANCESTRAL SPECIES 71 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b.k ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT00950000185231 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00940000161403 #25 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.c.b ##21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 ENSGT00940000160668 #18 ENSGT00940000160076 #17 ENSGT00940000159208.B #16 ENSGT00940000159762 #15 ENSGT00950000183127.b.h.a.a.b ENSGT00950000183127.b.h.a.a.a.a ENSGT00940000161847.c.a.a ENSGT00940000153385.b.a.b ENSGT00940000161157 ENSGT00940000160381 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1687 ENSCABG00000019173 #22 Abingdon island giant tortoise MODERN SPECIES 1333 KIFC1 (ENSCABG00000000470) #29 PHF1 (ENSCABG00000000512) #30 CUTA (ENSCABG00000000546) SYNGAP1 (ENSCABG00000000582) #31 ZBTB9 (ENSCABG00000000913) #32 ENSCABG00000000923 DAXX (ENSCABG00000000926) #28 ZBTB22 (ENSCABG00000000929) #27 ENSCABG00000000932 RGL2 (ENSCABG00000000933) #25 PFDN6 (ENSCABG00000000938) #24 B3GALT4 (ENSCABG00000000942) #22 WDR46 (ENSCABG00000000945) #23 ENSCABG00000000953 ##21 VPS52 (ENSCABG00000000975) #20 RING1 (ENSCABG00000001217) #19 HSD17B8 (ENSCABG00000001220) #18 SLC39A7 (ENSCABG00000001227) #17 RXRB (ENSCABG00000001231) #16 ENSCABG00000001235 #15 ENSCABG00000001241 #15 ENSCABG00000001256 ENSCABG00000001548 USP38 (ENSCABG00000001551) GAB1 (ENSCABG00000001560) SMARCA5 (ENSCABG00000001865) Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 20 ENSGEVG00005016205 ENSGEVG00005015996 ENSGEVG00005015962 ENSGEVG00005015886 GBA2 (ENSGEVG00005014952) RGP1 (ENSGEVG00005014826) MSMP (ENSGEVG00005014782) ENSGEVG00005014718 NPR2 (ENSGEVG00005014506) ENSGEVG00005014473 ENSGEVG00005014433 ENSGEVG00005014388 FAM221B (ENSGEVG00005014326) TMEM8B (ENSGEVG00005014246) GGT6 (ENSGEVG00005014119) ENSGEVG00005014080 #22 ENSGEVG00005014033 ENSGEVG00005013972 ENSGEVG00005013949 ENSGEVG00005013927 TESK1 (ENSGEVG00005013789) ENSGEVG00005013527 ENSGEVG00005013446 RUSC2 (ENSGEVG00005013367) ENSGEVG00005013281 UNC13B (ENSGEVG00005011557) ENSGEVG00005013247 ATOSB (ENSGEVG00005011343) STOML2 (ENSGEVG00005011315) PIGO (ENSGEVG00005011271) VCP (ENSGEVG00005011173) Goode s thornscrub tortoise MODERN SPECIES 192 ZBTB22 (ENSGEVG00005016648) #27 ENSGEVG00005016624 #26 RGL2 (ENSGEVG00005016592) #25 PFDN6 (ENSGEVG00005016575) #24 B3GALT4 (ENSGEVG00005016564) #22 WDR46 (ENSGEVG00005016544) #23 RPS18 (ENSGEVG00005016523) ##21 VPS52 (ENSGEVG00005016479) #20 RING1 (ENSGEVG00005016450) #19 HSD17B8 (ENSGEVG00005016420) #18 ENSGEVG00005016389 ENSGEVG00005014915 ENSGEVG00005014671 ENSGEVG00005014612 ENSGEVG00005014572 ENSGEVG00005014522 ENSGEVG00005014510 ENSGEVG00005014489 ENSGEVG00005014468 ENSGEVG00005014202 Emydidae ANCESTRAL SPECIES 96 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT00950000185231 ENSGT00390000009448 #28 ENSGT00940000159200 #26 ENSGT01030000234972 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.c.b ##21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 ENSGT00940000160668 #18 ENSGT00940000160076 #17 ENSGT00940000159208.B #16 ENSGT00940000159762 #15 Three-toed box turtle MODERN SPECIES 313 B3GALT4 (ENSTMTG00000018215) #22 WDR46 (ENSTMTG00000017905) #23 RPS18 (ENSTMTG00000017872) ##21 VPS52 (ENSTMTG00000017838) #20 RING1 (ENSTMTG00000017829) #19 painted turtle DUPLICATION painted turtle MODERN SPECIES 763 ENSCPBG00000017078 ELAVL1 (ENSCPBG00000017097) ZFR2 (ENSCPBG00000017098) MATK (ENSCPBG00000017100) ENSCPBG00000017101 ENSCPBG00000017102 MRPL54 (ENSCPBG00000017103) APBA3 (ENSCPBG00000017105) TJP3 (ENSCPBG00000017110) PIP5K1C (ENSCPBG00000017112) ENSCPBG00000017114 ENSCPBG00000017115 TBXA2R (ENSCPBG00000017116) ENSCPBG00000017117 HMG20B (ENSCPBG00000017118) ENSCPBG00000017119 #22 ENSCPBG00000017121 ENSCPBG00000017122 ENSCPBG00000017123 FZR1 (ENSCPBG00000017124) ENSCPBG00000017125 DOHH (ENSCPBG00000017126) NFIC (ENSCPBG00000017128) ENSCPBG00000017241 ENSCPBG00000018419 ENSCPBG00000018422 ENSCPBG00000018431 MEX3D (ENSCPBG00000018438) ENSCPBG00000018443 UQCR11 (ENSCPBG00000018448) TCF3 (ENSCPBG00000018451) painted turtle MODERN SPECIES 1210 KIFC1 (ENSCPBG00000004199) #29 PHF1 (ENSCPBG00000004153) #30 CUTA (ENSCPBG00000004123) SYNGAP1 (ENSCPBG00000004091) #31 ZBTB9 (ENSCPBG00000004079) #32 ENSCPBG00000004065 ENSCPBG00000004058 DAXX (ENSCPBG00000004052) #28 ENSCPBG00000004044 ENSCPBG00000004039 #26 ENSCPBG00000004031 PFDN6 (ENSCPBG00000004026) #24 B3GALT4 (ENSCPBG00000004018) #22 WDR46 (ENSCPBG00000004000) #23 RPS18 (ENSCPBG00000003985) ##21 VPS52 (ENSCPBG00000003971) #20 Lepidosauria ANCESTRAL SPECIES 260 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Episquamata ANCESTRAL SPECIES 48 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 Laterata ANCESTRAL SPECIES 80 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000173076 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 Common wall lizard MODERN SPECIES 2 TLN1 (ENSPMRG00000013810) CREB3 (ENSPMRG00000016778) ENSPMRG00000016785 ENSPMRG00000016788 ENSPMRG00000016794 GBA2 (ENSPMRG00000016812) RGP1 (ENSPMRG00000016905) MSMP (ENSPMRG00000016910) NPR2 (ENSPMRG00000016990) ENSPMRG00000017394 HINT2 (ENSPMRG00000017405) TAF1C (ENSPMRG00000010324) ENSPMRG00000010332 TMEM8B (ENSPMRG00000010341) LRPAP1 (ENSPMRG00000010346) ENSPMRG00000010351 #22 ENSPMRG00000010353 ENSPMRG00000010356 TESK1 (ENSPMRG00000010362) ENSPMRG00000010376 ENSPMRG00000010392 RUSC2 (ENSPMRG00000010406) ENSPMRG00000010537 UNC13B (ENSPMRG00000011362) ENSPMRG00000013352 ATOSB (ENSPMRG00000013354) STOML2 (ENSPMRG00000013364) PIGO (ENSPMRG00000013369) FANCG (ENSPMRG00000013373) VCP (ENSPMRG00000013404) ENSPMRG00000013410 Argentine black and white tegu MODERN SPECIES 179 ENSSMRG00000013617 #13 ENSSMRG00000013619 ENSSMRG00000013620 ENSSMRG00000013621 B3GALT4 (ENSSMRG00000013645) #22 WDR46 (ENSSMRG00000013646) #23 ENSSMRG00000013647 #26 ZBTB22 (ENSSMRG00000013648) #27 DAXX (ENSSMRG00000013649) #28 ENSSMRG00000013650 PHF1 (ENSSMRG00000013651) #30 ENSSMRG00000013653 SYNGAP1 (ENSSMRG00000013655) #31 ZBTB9 (ENSSMRG00000013658) #32 Toxicofera ANCESTRAL SPECIES 86 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT00940000161798.q.a #22 Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES ENSGT00940000161798.q.a.a #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000161798.q.a.a #22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2872 ENSNSUG00000000402 #22 Mainland tiger snake MODERN SPECIES 2232 ENSNSUG00000002432 #22 Eastern brown snake MODERN SPECIES 1680 ENSPTXG00000012604 #22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000161798.q.a.b #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000161798.q.a.b #22 Eastern brown snake MODERN SPECIES 172 ENSPTXG00000011345 ENSPTXG00000011344 ENSPTXG00000011343 ENSPTXG00000011342 ENSPTXG00000011341 ENSPTXG00000011340 ENSPTXG00000011339 ENSPTXG00000011338 ENSPTXG00000011337 ENSPTXG00000011336 ENSPTXG00000011335 #22 ENSPTXG00000011334 ENSPTXG00000011233 ENSPTXG00000011232 ENSPTXG00000011231 ENSPTXG00000011230 ENSPTXG00000011228 ENSPTXG00000011225 PFDN6 (ENSPTXG00000011224) #24 ENSPTXG00000011222 ENSPTXG00000011204 HLA-DRA (ENSPTXG00000011200) ENSPTXG00000011198 ENSPTXG00000011197 ENSPTXG00000011196 ENSPTXG00000011191 Mainland tiger snake MODERN SPECIES 351 ENSNSUG00000004778 ENSNSUG00000004790 ENSNSUG00000004853 ENSNSUG00000004854 ENSNSUG00000004855 ENSNSUG00000004856 ENSNSUG00000004857 ENSNSUG00000004874 ENSNSUG00000004981 ENSNSUG00000004983 ENSNSUG00000004984 ENSNSUG00000004985 ENSNSUG00000004986 ENSNSUG00000004987 ENSNSUG00000004989 #22 ENSNSUG00000004995 ENSNSUG00000005000 ENSNSUG00000005139 ENSNSUG00000005211 ENSNSUG00000005334 ENSNSUG00000005336 PFDN6 (ENSNSUG00000005338) #24 Blue-lipped sea krait MODERN SPECIES 6088 ENSLLTG00000013627 ENSLLTG00000013633 #22 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 1 ENSNNAG00000002580 DAXX (ENSNNAG00000002585) #28 ENSNNAG00000002588 #27 TAPBP (ENSNNAG00000002593) #26 WDR46 (ENSNNAG00000002604) #23 ENSNNAG00000002619 #22 ENSNNAG00000002624 ENSNNAG00000002631 ENSNNAG00000002635 ENSNNAG00000002646 ENSNNAG00000002663 ENSNNAG00000002670 ENSNNAG00000002675 ENSNNAG00000002685 ENSNNAG00000002691 ENSNNAG00000002701 #22 ENSNNAG00000002706 BRD2 (ENSNNAG00000002715) HLA-DMA (ENSNNAG00000000283) ENSNNAG00000000325 ENSNNAG00000000357 ENSNNAG00000000471 ENSNNAG00000000697 ENSNNAG00000000714 ENSNNAG00000000800 ENSNNAG00000001217 ENSNNAG00000001229 ENSNNAG00000001252 ENSNNAG00000001259 ENSNNAG00000001279 ENSNNAG00000001305 Indian cobra MODERN SPECIES 193 ENSNNAG00000012738 #22 Elapidae ANCESTRAL SPECIES ENSGT00940000161798.q.b #22 Indian cobra MODERN SPECIES 1 ENSNNAG00000000357 ENSNNAG00000000325 HLA-DMA (ENSNNAG00000000283) BRD2 (ENSNNAG00000002715) ENSNNAG00000002706 ENSNNAG00000002701 #22 ENSNNAG00000002691 ENSNNAG00000002685 ENSNNAG00000002675 ENSNNAG00000002670 ENSNNAG00000002663 ENSNNAG00000002646 ENSNNAG00000002635 ENSNNAG00000002631 ENSNNAG00000002624 ENSNNAG00000002619 #22 WDR46 (ENSNNAG00000002604) #23 TAPBP (ENSNNAG00000002593) #26 ENSNNAG00000002588 #27 DAXX (ENSNNAG00000002585) #28 ENSNNAG00000002580 ENSNNAG00000002573 PHF1 (ENSNNAG00000002563) #30 CUTA (ENSNNAG00000002551) SYNGAP1 (ENSNNAG00000002394) #31 ZBTB9 (ENSNNAG00000002352) #32 ENSNNAG00000002342 ENSNNAG00000002338 ENSNNAG00000002330 ENSNNAG00000002320 ENSNNAG00000002314 Elapidae ANCESTRAL SPECIES 68 ENSGT00940000161798.r #22 ENSGT00390000007075 #23 ENSGT00940000159200 #26 ENSGT00940000160991 #27 ENSGT00390000009448 #28 ENSGT00940000164565 ENSGT00940000161735 #29 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 Elapidae_a ANCESTRAL SPECIES 299 ENSGT00940000161798.r #22 ENSGT00390000007075 #23 Acanthophiinae ANCESTRAL SPECIES 285 ENSGT00940000161798.r #22 ENSGT00390000007075 #23 Eastern brown snake MODERN SPECIES 691 ENSPTXG00000017360 #22 WDR46 (ENSPTXG00000017362) #23 ENSPTXG00000017364 #26 Lizard DUPLICATION Lizard MODERN SPECIES 1196 ENSACAG00000013686 ENSACAG00000027204 ENSACAG00000042220 #22 ENSACAG00000022991 ENSACAG00000013781 ENSACAG00000039086 ENSACAG00000043199 ENSACAG00000026841 ENSACAG00000023891 ENSACAG00000037917 ENSACAG00000026933 Lizard DUPLICATION Lizard MODERN SPECIES 1547 ENSACAG00000007244 ENSACAG00000045255 ENSACAG00000007558 ENSACAG00000007560 #22 Lizard MODERN SPECIES 1132 ENSACAG00000044689 ENSACAG00000036236 ENSACAG00000037885 ENSACAG00000038553 ENSACAG00000041102 ENSACAG00000006173 ENSACAG00000036258 ENSACAG00000038876 ENSACAG00000006319 ENSACAG00000039539 ENSACAG00000006391 ENSACAG00000028021 #22 ENSACAG00000006467 ENSACAG00000006477 ENSACAG00000006492 ENSACAG00000029516 ENSACAG00000024638 ENSACAG00000006498 Anura ANCESTRAL SPECIES 33 ENSGT00940000159897 ENSGT00940000157293.sb ENSGT00940000160381 ENSGT00940000161157 ENSGT00940000153385.b.a.b ENSGT00940000161847 ENSGT00950000183127.a.a ENSGT00950000183127.b ENSGT00940000159762.pb #15 ENSGT00940000159208.B #16 ENSGT00940000164565 ENSGT00390000009448 #28 ENSGT00940000160991 #27 ENSGT00940000159200 #26 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000012691.d ##21 ENSGT00390000008815 #20 ENSGT00940000161022 #19 ENSGT00940000160668 #18 ENSGT00950000183180.a.b #30 ENSGT00390000017030.b.b ENSGT00940000158438 #31 ENSGT00940000162408 #32 ENSGT00940000169011 ENSGT00390000010806 ENSGT00390000018500.a ENSGT00940000157642 ENSGT00940000163974 ENSGT01070000253822.D.b Frog MODERN SPECIES 8 ENSXETG00000044382 ENSXETG00000047770 ENSXETG00000044487 ENSXETG00000045519 ENSXETG00000047473 XB5827395 [provisional] (ENSXETG00000025586) col11a2p1 (ENSXETG00000012724) #15 rxrb (ENSXETG00000040714) #16 MGC147402 (ENSXETG00000031644) kifc1 (ENSXETG00000020409) daxx (ENSXETG00000020372) #28 zbtb22 (ENSXETG00000044063) #27 tapbp (ENSXETG00000020402) #26 rgl2 (ENSXETG00000020405) pfdn6 (ENSXETG00000020401) #24 b3galt4 (ENSXETG00000045704) #22 wdr46 (ENSXETG00000020398) #23 vps52 (ENSXETG00000020385) #20 ring1 (ENSXETG00000020370) #19 hsd17b8 (ENSXETG00000020365) #18 slc39a7 (ENSXETG00000020367) #17 rps18 (ENSXETG00000020394) ##21 phf1 (ENSXETG00000020362) #30 cuta (ENSXETG00000025575) syngap1 (ENSXETG00000020358) #31 zbtb9 (ENSXETG00000048840) #32 ENSXETG00000038310 ccdc105 (ENSXETG00000035593) angptl2 (ENSXETG00000020355) sh3bp5l (ENSXETG00000020349) gabbr1 (ENSXETG00000020346) Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES ENSLLEG00000003708 ENSLLEG00000003702 ENSLLEG00000003694 ENSLLEG00000003682 ENSLLEG00000003677 RAB27B (ENSLLEG00000003668) ENSLLEG00000003645 MBD2 (ENSLLEG00000003622) POLI (ENSLLEG00000003568) ENSLLEG00000003547 ENSLLEG00000003538 ENSLLEG00000003529 ENSLLEG00000003523 TMEM8B (ENSLLEG00000003515) ENSLLEG00000003500 ENSLLEG00000003491 #22 NPR2 (ENSLLEG00000003479) ENSLLEG00000003465 MSMP (ENSLLEG00000003448) LENG1 (ENSLLEG00000003387) ENSLLEG00000003378 ENSLLEG00000003336 ENSLLEG00000003322 ENSLLEG00000003313 ENSLLEG00000003304 ENSLLEG00000003293 ENSLLEG00000001788 ENSLLEG00000001664 ENSLLEG00000001617 ENSLLEG00000001568 ENSLLEG00000001560 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000020943 ENSLLEG00000021029 ENSLLEG00000021099 ENSLLEG00000021133 ENSLLEG00000021209 HLA-DMA (ENSLLEG00000021329) BRD2 (ENSLLEG00000021438) ENSLLEG00000021555 ENSLLEG00000021644 ENSLLEG00000021989 ENSLLEG00000022079 #15 ENSLLEG00000022230 #15 RXRB (ENSLLEG00000022477) #16 ENSLLEG00000022945 PFDN6 (ENSLLEG00000023220) #24 B3GALT4 (ENSLLEG00000023322) #22 WDR46 (ENSLLEG00000023371) #23 ENSLLEG00000024002 ##21 VPS52 (ENSLLEG00000024171) #20 RING1 (ENSLLEG00000024306) #19 HSD17B8 (ENSLLEG00000024356) #18 ENSLLEG00000024412 PHF1 (ENSLLEG00000024519) #30 CUTA (ENSLLEG00000024638) ENSLLEG00000024796 #31 ZBTB9 (ENSLLEG00000024914) #32 ENSLLEG00000024941 ENSLLEG00000025008 ENSLLEG00000025078 SH3BP5L (ENSLLEG00000025168) GABBR1 (ENSLLEG00000025381) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 979 ENSLACG00000013925 #22 TESK1 (ENSLACG00000013198) ENSLACG00000012310 ENSLACG00000010200 ENSLACG00000022532 ENSLACG00000006669 Coelacanth MODERN SPECIES 875 HSD17B8 (ENSLACG00000012715) #18 VPS52 (ENSLACG00000012474) #20 ENSLACG00000012423 RING1 (ENSLACG00000012343) #19 ENSLACG00000012273 ENSLACG00000011364 ENSLACG00000011010 RPS18 (ENSLACG00000010919) #21 ENSLACG00000010811 ENSLACG00000022200 WDR46 (ENSLACG00000009350) #23 ENSLACG00000009159 #26 ENSLACG00000008507 ENSLACG00000008471 PFDN6 (ENSLACG00000008272) #24 ENSLACG00000008230 #22 ENSLACG00000007948 ENSLACG00000007814 CUTA (ENSLACG00000007639) ZBTB9 (ENSLACG00000007504) #32 KIFC1 (ENSLACG00000006938) #29 PHF1 (ENSLACG00000006332) #30 C12orf57 (ENSLACG00000006114) SYNGAP1 (ENSLACG00000003476) #31 ENSLACG00000003201 #27 C11orf98 (ENSLACG00000022136) ZBTB22 (ENSLACG00000001687) #27 ENSLACG00000001090 #28 ENSLACG00000000011 Actinopterygii ANCESTRAL SPECIES 561 ENSGT00940000157861 ENSGT00940000161883 ENSGT00390000010512 #24 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Reedfish DUPLICATION Reedfish MODERN SPECIES 15 MRPS36 (ENSECRG00000009919) pdxp (ENSECRG00000009930) c6 (ENSECRG00000009939) c7b (ENSECRG00000009958) plcxd3 (ENSECRG00000009969) oxct1a (ENSECRG00000009977) rimoc1 (ENSECRG00000009986) FBXO4 (ENSECRG00000009994) ENSECRG00000010010 ENSECRG00000010033 znf131 (ENSECRG00000010040) ENSECRG00000010051 hmgcs1 (ENSECRG00000010062) TMEM8B (ENSECRG00000010078) ENSECRG00000010092 ENSECRG00000010100 #22 tars1 (ENSECRG00000010130) gas1a (ENSECRG00000010191) dapk1 (ENSECRG00000010207) si:dkey-26g8.5 (ENSECRG00000010227) fbp2 (ENSECRG00000010235) FBP1 (ENSECRG00000010251) KANK1 (ENSECRG00000010264) dmrt1 (ENSECRG00000010275) ENSECRG00000010288 dmrt3a (ENSECRG00000010299) dmrt2a (ENSECRG00000010306) smarca2 (ENSECRG00000010322) adamts3 (ENSECRG00000011880) ENSECRG00000011896 NPFFR2 (ENSECRG00000011914) Reedfish MODERN SPECIES ENSECRG00000000401 #27 zbtb22b (ENSECRG00000000404) #27 ENSECRG00000000411 ENSECRG00000000416 ENSECRG00000000428 ENSECRG00000000460 ENSECRG00000000454 ENSECRG00000000446 ENSECRG00000000472 ENSECRG00000000477 ENSECRG00000000483 ENSECRG00000000505 ENSECRG00000000538 ENSECRG00000000551 pfdn6 (ENSECRG00000000570) #24 ENSECRG00000000581 #22 wdr46 (ENSECRG00000000589) #23 ENSECRG00000000611 ENSECRG00000000623 #28 grcc10 (ENSECRG00000000633) PHF1 (ENSECRG00000000647) #30 SYNGAP1 (ENSECRG00000000684) #31 ENSECRG00000000730 #32 ZBTB9 (ENSECRG00000000734) #32 ENSECRG00000000753 ENSECRG00000000771 zgc:165604 (ENSECRG00000000785) ENSECRG00000000805 ENSECRG00000000827 LTBP3 (ENSECRG00000000894) ENSECRG00000000987 Neopterygii ANCESTRAL SPECIES 667 ENSGT00940000161798 #22 ENSGT00390000007075 #23 Osteoglossocephalai ANCESTRAL SPECIES 188 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00960000189798 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342 ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241 ENSGT00940000164079 Osteoglossiformes ANCESTRAL SPECIES 223 ENSGT00940000154554.b ENSGT00740000116959 ENSGT00940000179763 ENSGT00940000157794 ENSGT00940000168503.A ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.nb ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.c ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.f P. kingsleyae MODERN SPECIES 171 ENSPKIG00000012509 ENSPKIG00000012491 BRPF1 (ENSPKIG00000012428) ENSPKIG00000012369 CRELD1 (ENSPKIG00000012326) ENSPKIG00000012306 IFT122 (ENSPKIG00000012198) exorh (ENSPKIG00000012132) PLXND1 (ENSPKIG00000011947) TMCC1 (ENSPKIG00000011848) trh (ENSPKIG00000011838) RBSN (ENSPKIG00000011784) mrps25 (ENSPKIG00000011826) nr2c2 (ENSPKIG00000011741) ENSPKIG00000011729 B3GALT4 (ENSPKIG00000011720) #22 wdr46 (ENSPKIG00000011681) #23 ENSPKIG00000011646 ENSPKIG00000011614 ENSPKIG00000011563 ENSPKIG00000011530 ENSPKIG00000011505 ogg1 (ENSPKIG00000011480) ENSPKIG00000011455 QRICH1 (ENSPKIG00000011401) tbc1d25 (ENSPKIG00000011364) ENSPKIG00000011338 nt5dc2 (ENSPKIG00000011294) zgc:162200 (ENSPKIG00000011259) ccdc22 (ENSPKIG00000011235) slc38a5b (ENSPKIG00000011198) Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 8 nol6 (ENSSFOG00015016052) aqp3a (ENSSFOG00015016026) ENSSFOG00015016019 ENSSFOG00015015878 rhobtb4 (ENSSFOG00015015822) ENSSFOG00015015763 ENSSFOG00015015747 rtkna (ENSSFOG00015015698) smn1 (ENSSFOG00015015507) hspb11 (ENSSFOG00015032493) mccc2 (ENSSFOG00015015370) ENSSFOG00015015341 DAB2 (ENSSFOG00015015237) TMEM8B (ENSSFOG00015015208) ENSSFOG00015025706 ENSSFOG00015015181 #22 tars1 (ENSSFOG00015015118) gas1a (ENSSFOG00015027640) dapk1 (ENSSFOG00015015059) ctsla (ENSSFOG00015015031) fbp2 (ENSSFOG00015015025) ENSSFOG00015015007 ENSSFOG00015014968 dmrt3a (ENSSFOG00015014937) dmrt2a (ENSSFOG00015014922) SMARCA2 (ENSSFOG00015014870) adamts3 (ENSSFOG00015014846) NPFFR2 (ENSSFOG00015029921) gc (ENSSFOG00015014799) slc4a4a (ENSSFOG00015032673) dck (ENSSFOG00015014636) Asian bonytongue MODERN SPECIES 11 ENSSFOG00015024492 ninj1 (ENSSFOG00015016601) WNK2 (ENSSFOG00015016470) BRPF1 (ENSSFOG00015016392) ENSSFOG00015016346 CRELD1 (ENSSFOG00015016303) ENSSFOG00015016292 IFT122 (ENSSFOG00015016200) exorh (ENSSFOG00015016170) PLXND1 (ENSSFOG00015029894) tmcc1b (ENSSFOG00015016085) trh (ENSSFOG00015016071) RBSN (ENSSFOG00015024858) mrps25 (ENSSFOG00015016016) nr2c2 (ENSSFOG00015015971) ENSSFOG00015029674 #22 wdr46 (ENSSFOG00015015934) #23 sult1st3 (ENSSFOG00015015915) ENSSFOG00015015904 ogg1 (ENSSFOG00015015886) qars1 (ENSSFOG00015015812) qrich1 (ENSSFOG00015015775) tcta (ENSSFOG00015029579) glyctk (ENSSFOG00015030587) WDR82 (ENSSFOG00015015692) cishb (ENSSFOG00015026106) hemk1 (ENSSFOG00015015643) rhoab (ENSSFOG00015032232) sema3h (ENSSFOG00015015465) borcs6 (ENSSFOG00015015441) si:dkey-72l14.3 (ENSSFOG00015015421) Clupeocephala ANCESTRAL SPECIES 193 ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00960000189798 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b ENSGT00940000163342.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Euteleosteomorpha ANCESTRAL SPECIES 11 ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00940000157261.k.b Acanthomorphata ANCESTRAL SPECIES 3 ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00940000157261.k.b Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00940000157261.k.b Pinecone sodierfish MODERN SPECIES 21 WNK2 (ENSMMDG00005016715) BRPF1 (ENSMMDG00005016680) ENSMMDG00005016675 ENSMMDG00005016671 CRELD1 (ENSMMDG00005016645) ENSMMDG00005016632 ENSMMDG00005016629 IFT122 (ENSMMDG00005013012) exorh (ENSMMDG00005012947) PLXND1 (ENSMMDG00005012798) TMCC1 (ENSMMDG00005012775) trh (ENSMMDG00005012773) RBSN (ENSMMDG00005012646) mrps25 (ENSMMDG00005012633) nr2c2 (ENSMMDG00005012018) B3GALT4 (ENSMMDG00005012002) #22 wdr46 (ENSMMDG00005011998) #23 ENSMMDG00005011324 ENSMMDG00005011296 ENSMMDG00005011289 ogg1 (ENSMMDG00005011288) qars1 (ENSMMDG00005011040) QRICH1 (ENSMMDG00005010845) ENSMMDG00005010842 prickle2a (ENSMMDG00005010835) rho (ENSMMDG00005010831) MAGI1 (ENSMMDG00005010828) ren (ENSMMDG00005010824) ENSMMDG00005010822 FMOD (ENSMMDG00005010820) mapkapk2b (ENSMMDG00005010785) Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00940000157261.k.b Tiger tail seahorse MODERN SPECIES 404 ENSHCOG00000007602 dusp27 (ENSHCOG00000007609) ENSHCOG00000007616 cybb (ENSHCOG00000007641) dynlt3 (ENSHCOG00000007654) rpgrb (ENSHCOG00000007726) si:ch211-114n24.6 (ENSHCOG00000007846) bin1b (ENSHCOG00000007863) ihhb (ENSHCOG00000007869) nhej1 (ENSHCOG00000007870) ENSHCOG00000007906 dnpep (ENSHCOG00000007928) tmem198b (ENSHCOG00000007941) ENSHCOG00000007980 nr2c2 (ENSHCOG00000008017) B3GALT4 (ENSHCOG00000008027) #22 wdr46 (ENSHCOG00000008102) #23 ENSHCOG00000008114 ENSHCOG00000008134 ogg1 (ENSHCOG00000008142) qars1 (ENSHCOG00000008150) QRICH1 (ENSHCOG00000008161) prickle2a (ENSHCOG00000008264) rho (ENSHCOG00000008782) MAGI1 (ENSHCOG00000008943) ren (ENSHCOG00000009027) ENSHCOG00000009067 eif2d (ENSHCOG00000009140) ENSHCOG00000009190 rh50 (ENSHCOG00000009197) rbm39b (ENSHCOG00000009222) Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000166600 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Zig-zag eel MODERN SPECIES 21 ENSMAMG00000027098 ENSMAMG00000024090 ENSMAMG00000024089 ENSMAMG00000024088 CRELD1 (ENSMAMG00000024087) ENSMAMG00000024086 ENSMAMG00000024084 IFT122 (ENSMAMG00000024083) exorh (ENSMAMG00000013645) PLXND1 (ENSMAMG00000013234) TMCC1 (ENSMAMG00000013203) trh (ENSMAMG00000013128) ENSMAMG00000025442 mrps25 (ENSMAMG00000013121) nr2c2 (ENSMAMG00000013058) ENSMAMG00000013047 #22 wdr46 (ENSMAMG00000012974) #23 sult1st3 (ENSMAMG00000012921) ENSMAMG00000012899 ENSMAMG00000026158 ENSMAMG00000012857 qars1 (ENSMAMG00000012801) ENSMAMG00000012785 ENSMAMG00000012769 ENSMAMG00000012763 prickle2a (ENSMAMG00000012732) ENSMAMG00000012215 ENSMAMG00000012125 ENSMAMG00000012112 ENSMAMG00000012084 ENSMAMG00000012065 Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a Climbing perch MODERN SPECIES 20 ENSATEG00000028766 ENSATEG00000014715 ENSATEG00000014675 ENSATEG00000014659 ENSATEG00000014609 ENSATEG00000014603 ENSATEG00000014594 IFT122 (ENSATEG00000014483) exorh (ENSATEG00000009473) PLXND1 (ENSATEG00000009264) TMCC1 (ENSATEG00000009224) trh (ENSATEG00000009215) ENSATEG00000028613 mrps25 (ENSATEG00000009141) nr2c2 (ENSATEG00000009047) ENSATEG00000009032 #22 wdr46 (ENSATEG00000009023) #23 ENSATEG00000008967 ENSATEG00000008954 ENSATEG00000008943 ENSATEG00000030071 ENSATEG00000008904 qars1 (ENSATEG00000008797) ENSATEG00000008718 ENSATEG00000008701 prickle2a (ENSATEG00000008671) ENSATEG00000007888 ENSATEG00000007752 ENSATEG00000007638 ENSATEG00000007599 ENSATEG00000007591 Siamese fighting fish MODERN SPECIES 18 NINJ1 (ENSBSLG00000014476) WNK2 (ENSBSLG00000014520) BRPF1 (ENSBSLG00000014570) ENSBSLG00000014665 CRELD1 (ENSBSLG00000014702) ENSBSLG00000014779 ENSBSLG00000014789 IFT122 (ENSBSLG00000014801) exorh (ENSBSLG00000015044) PLXND1 (ENSBSLG00000015054) TMCC1 (ENSBSLG00000015463) trh (ENSBSLG00000015661) RBSN (ENSBSLG00000015683) mrps25 (ENSBSLG00000015708) nr2c2 (ENSBSLG00000015728) B3GALT4 (ENSBSLG00000015756) #22 wdr46 (ENSBSLG00000015764) #23 ENSBSLG00000015859 ENSBSLG00000016083 ENSBSLG00000016094 ENSBSLG00000016108 ENSBSLG00000016123 ENSBSLG00000016130 ENSBSLG00000016164 ogg1 (ENSBSLG00000016172) qars1 (ENSBSLG00000016208) QRICH1 (ENSBSLG00000016482) ENSBSLG00000016506 ENSBSLG00000016508 prickle2a (ENSBSLG00000016519) rho (ENSBSLG00000017206) Carangaria ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.a.b.a.b.b ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Seriola ANCESTRAL SPECIES 8 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.b.b.b ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b.mc ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 Yellowtail amberjack MODERN SPECIES 3047 exorh (ENSSLDG00000004543) PLXND1 (ENSSLDG00000004569) TMCC1 (ENSSLDG00000004707) trh (ENSSLDG00000004771) RBSN (ENSSLDG00000004795) mrps25 (ENSSLDG00000004856) nr2c2 (ENSSLDG00000004935) wdr46 (ENSSLDG00000005016) #23 B3GALT4 (ENSSLDG00000005046) #22 ENSSLDG00000005059 ENSSLDG00000005087 ENSSLDG00000005120 sult1st3 (ENSSLDG00000005168) ENSSLDG00000005363 ENSSLDG00000005413 ogg1 (ENSSLDG00000005428) qars1 (ENSSLDG00000005475) QRICH1 (ENSSLDG00000005585) ENSSLDG00000005647 ENSSLDG00000005695 prickle2a (ENSSLDG00000005721) rho (ENSSLDG00000005814) MAGI1 (ENSSLDG00000006379) ren (ENSSLDG00000006598) Greater amberjack MODERN SPECIES 16 ENSSDUG00000001021 ENSSDUG00000001060 BRPF1 (ENSSDUG00000001144) ENSSDUG00000001236 ENSSDUG00000001283 ENSSDUG00000001361 ENSSDUG00000001365 IFT122 (ENSSDUG00000001388) exorh (ENSSDUG00000002263) PLXND1 (ENSSDUG00000012735) TMCC1 (ENSSDUG00000012875) trh (ENSSDUG00000012915) RBSN (ENSSDUG00000012924) mrps25 (ENSSDUG00000012983) nr2c2 (ENSSDUG00000013049) B3GALT4 (ENSSDUG00000013121) #22 wdr46 (ENSSDUG00000013128) #23 ENSSDUG00000013164 ENSSDUG00000013232 ENSSDUG00000013295 ENSSDUG00000013871 ENSSDUG00000013905 ogg1 (ENSSDUG00000013964) qars1 (ENSSDUG00000014004) QRICH1 (ENSSDUG00000014102) ENSSDUG00000014128 prickle2a (ENSSDUG00000014144) rho (ENSSDUG00000014169) MAGI1 (ENSSDUG00000014188) ren (ENSSDUG00000014357) csf1b (ENSSDUG00000014430) Barramundi perch MODERN SPECIES 500 CRELD1 (ENSLCAG00010009742) ENSLCAG00010009746 IFT122 (ENSLCAG00010009766) exorh (ENSLCAG00010009776) PLXND1 (ENSLCAG00010009798) TMCC1 (ENSLCAG00010009833) trh (ENSLCAG00010009835) RBSN (ENSLCAG00010009843) mrps25 (ENSLCAG00010009862) nr2c2 (ENSLCAG00010009877) B3GALT4 (ENSLCAG00010009908) #22 wdr46 (ENSLCAG00010009914) #23 ENSLCAG00010009922 Pleuronectoidei ANCESTRAL SPECIES 38 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.b.a ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00550000074865 Tongue sole MODERN SPECIES 1 csf1b (ENSCSEG00000021332) ren (ENSCSEG00000021336) MAGI1 (ENSCSEG00000021364) rho (ENSCSEG00000021368) prickle2a (ENSCSEG00000021384) ENSCSEG00000021385 QRICH1 (ENSCSEG00000021386) qars1 (ENSCSEG00000021387) ogg1 (ENSCSEG00000021388) ABTB1 (ENSCSEG00000021389) dnase1l4.1 (ENSCSEG00000021390) ENSCSEG00000021391 mrps25 (ENSCSEG00000021392) nr2c2 (ENSCSEG00000021393) wdr46 (ENSCSEG00000021394) #23 B3GALT4 (ENSCSEG00000021395) #22 ENSCSEG00000021396 ENSCSEG00000021397 SLC6A6 (ENSCSEG00000021398) grip2a (ENSCSEG00000021399) ENSCSEG00000021400 zgc:171857 (ENSCSEG00000021401) WNT7A (ENSCSEG00000021402) ENSCSEG00000021424 NUP210 (ENSCSEG00000021425) IQSEC1 (ENSCSEG00000021426) zgc:77375 (ENSCSEG00000021427) cnbpa (ENSCSEG00000021428) raf1a (ENSCSEG00000021429) syn2a (ENSCSEG00000021430) VGLL4 (ENSCSEG00000021431) Turbot MODERN SPECIES 2 abcd1 (ENSSMAG00000012522) ENSSMAG00000012502 ENSSMAG00000012466 ENSSMAG00000012458 ENSSMAG00000012446 ENSSMAG00000012438 ENSSMAG00000012385 IFT122 (ENSSMAG00000012276) exorh (ENSSMAG00000012265) PLXND1 (ENSSMAG00000012111) TMCC1 (ENSSMAG00000012052) trh (ENSSMAG00000012040) ENSSMAG00000012023 mrps25 (ENSSMAG00000022586) nr2c2 (ENSSMAG00000011972) ENSSMAG00000011963 #22 wdr46 (ENSSMAG00000011942) #23 ENSSMAG00000011921 ENSSMAG00000011909 ENSSMAG00000011897 ENSSMAG00000011758 ENSSMAG00000011743 ENSSMAG00000011702 ENSSMAG00000022952 prickle2a (ENSSMAG00000011662) RH1 (ENSSMAG00000011348) ENSSMAG00000011004 ENSSMAG00000010970 ENSSMAG00000034093 ENSSMAG00000010908 eif2d (ENSSMAG00000010879) Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Tetraodontidae ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00940000179063 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00550000074865 Fugu MODERN SPECIES 15 ENSTRUG00000032059 BRPF1 (ENSTRUG00000009699) ENSTRUG00000023076 ENSTRUG00000009944 CRELD1 (ENSTRUG00000022535) ENSTRUG00000026775 ENSTRUG00000010124 IFT122 (ENSTRUG00000010146) rho (ENSTRUG00000010617) PLXND1 (ENSTRUG00000010718) TMCC1 (ENSTRUG00000011412) trh (ENSTRUG00000011453) RBSN (ENSTRUG00000022554) mrps25 (ENSTRUG00000011566) nr2c2 (ENSTRUG00000011580) ENSTRUG00000011725 #22 wdr46 (ENSTRUG00000011745) #23 ENSTRUG00000003656 ENSTRUG00000001170 ENSTRUG00000000731 ENSTRUG00000025178 ENSTRUG00000024150 ENSTRUG00000003123 ogg1 (ENSTRUG00000003379) qars1 (ENSTRUG00000021416) QRICH1 (ENSTRUG00000003738) ENSTRUG00000029081 prickle2a (ENSTRUG00000004254) rho (ENSTRUG00000004527) MAGI1 (ENSTRUG00000012813) ren (ENSTRUG00000012604) Tetraodon MODERN SPECIES 24 ENSTNIG00000001362 ENSTNIG00000017931 BRPF1 (ENSTNIG00000017930) ENSTNIG00000000358 ENSTNIG00000017929 CRELD1 (ENSTNIG00000017928) ENSTNIG00000017927 IFT122 (ENSTNIG00000017926) exorh (ENSTNIG00000017925) PLXND1 (ENSTNIG00000017924) TMCC1 (ENSTNIG00000017923) trh (ENSTNIG00000017922) RBSN (ENSTNIG00000017921) mrps25 (ENSTNIG00000017920) nr2c2 (ENSTNIG00000017919) ENSTNIG00000017918 #22 wdr46 (ENSTNIG00000017917) #23 sult1st3 (ENSTNIG00000017915) ENSTNIG00000017916 ogg1 (ENSTNIG00000017914) qars1 (ENSTNIG00000017913) QRICH1 (ENSTNIG00000017912) ENSTNIG00000017911 prickle2a (ENSTNIG00000017910) rho (ENSTNIG00000017909) ren (ENSTNIG00000017908) FMOD (ENSTNIG00000017907) eif2d (ENSTNIG00000017906) ENSTNIG00000000366 ENSTNIG00000017905 rbm39b (ENSTNIG00000017904) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Ballan wrasse MODERN SPECIES 26 DUSP7 (ENSLBEG00000007544) ENSLBEG00000007571 spo11 (ENSLBEG00000007627) bmp7b (ENSLBEG00000007667) irf10 (ENSLBEG00000007684) ENSLBEG00000007715 ENSLBEG00000007734 ENSLBEG00000007774 ENSLBEG00000007883 MTG2 (ENSLBEG00000007918) ENSLBEG00000007935 lsm14b (ENSLBEG00000007951) ENSLBEG00000007971 TAF4 (ENSLBEG00000007994) nr2c2 (ENSLBEG00000008028) ENSLBEG00000008057 #22 wdr46 (ENSLBEG00000008068) #23 ENSLBEG00000008109 ENSLBEG00000008156 ENSLBEG00000008197 ENSLBEG00000008244 ogg1 (ENSLBEG00000008269) qars1 (ENSLBEG00000008312) QRICH1 (ENSLBEG00000008381) ENSLBEG00000008431 ENSLBEG00000008455 prickle2a (ENSLBEG00000008475) rho (ENSLBEG00000008570) MAGI1 (ENSLBEG00000009222) ren (ENSLBEG00000009527) csf1b (ENSLBEG00000009565) Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00940000179063 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000157161.a.b.j ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00940000179063 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a European seabass MODERN SPECIES 14 ENSDLAG00005031065 ENSDLAG00005009188 ENSDLAG00005009222 ENSDLAG00005009228 ENSDLAG00005009246 ENSDLAG00005009295 ENSDLAG00005009317 ENSDLAG00005035111 IFT122 (ENSDLAG00005009407) exorh (ENSDLAG00005009507) PLXND1 (ENSDLAG00005009532) TMCC1 (ENSDLAG00005009862) trh (ENSDLAG00005009871) ENSDLAG00005009879 nr2c2 (ENSDLAG00005009955) ENSDLAG00005010075 #22 wdr46 (ENSDLAG00005026705) #23 ENSDLAG00005010203 ENSDLAG00005010241 ENSDLAG00005010413 ENSDLAG00005010529 ENSDLAG00005034137 qars1 (ENSDLAG00005010569) ENSDLAG00005011036 ENSDLAG00005029930 prickle2a (ENSDLAG00005011112) ENSDLAG00005011122 ENSDLAG00005011139 ENSDLAG00005011385 ENSDLAG00005011416 ENSDLAG00005011429 Large yellow croaker MODERN SPECIES 18 WNK2 (ENSLCRG00005006266) BRPF1 (ENSLCRG00005006259) ENSLCRG00005006251 ENSLCRG00005006244 CRELD1 (ENSLCRG00005006235) ENSLCRG00005006232 ENSLCRG00005006229 IFT122 (ENSLCRG00005005928) exorh (ENSLCRG00005005920) ENSLCRG00005005919 PLXND1 (ENSLCRG00005005888) trh (ENSLCRG00005005876) RBSN (ENSLCRG00005005874) mrps25 (ENSLCRG00005005871) nr2c2 (ENSLCRG00005005851) ENSLCRG00005005846 #22 wdr46 (ENSLCRG00005005768) #23 ENSLCRG00005005764 ENSLCRG00005005642 Gilthead seabream MODERN SPECIES 21 ENSSAUG00010012885 ENSSAUG00010012884 BRPF1 (ENSSAUG00010012817) ENSSAUG00010012815 ENSSAUG00010012814 CRELD1 (ENSSAUG00010012811) ENSSAUG00010012809 IFT122 (ENSSAUG00010012507) exorh (ENSSAUG00010012479) PLXND1 (ENSSAUG00010011902) TMCC1 (ENSSAUG00010011888) trh (ENSSAUG00010011884) RBSN (ENSSAUG00010011722) mrps25 (ENSSAUG00010011715) nr2c2 (ENSSAUG00010011630) ENSSAUG00010011629 #22 wdr46 (ENSSAUG00010011621) #23 ENSSAUG00010011611 nt5dc2 (ENSSAUG00010011417) rap1gapa (ENSSAUG00010011409) aurkaip1 (ENSSAUG00010011407) mxra8b (ENSSAUG00010011406) dvl1b (ENSSAUG00010010210) tnfrsf9a (ENSSAUG00010010188) ENSSAUG00010010186 uts2a (ENSSAUG00010010184) ENSSAUG00010010181 CAMTA1 (ENSSAUG00010010173) dnajc11a (ENSSAUG00010010115) ENSSAUG00010010095 ENSSAUG00010010093 Perciformes ANCESTRAL SPECIES 4 ENSGT00940000157161.a.b.g ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a Perciformes_a ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b.g ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.a.b.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a Pike perch MODERN SPECIES 31 ENSSLUG00000023225 BRPF1 (ENSSLUG00000023217) ENSSLUG00000023184 ENSSLUG00000023181 CRELD1 (ENSSLUG00000023171) ENSSLUG00000023165 ENSSLUG00000023164 IFT122 (ENSSLUG00000022036) exorh (ENSSLUG00000021970) PLXND1 (ENSSLUG00000021847) TMCC1 (ENSSLUG00000021808) trh (ENSSLUG00000021796) RBSN (ENSSLUG00000021654) mrps25 (ENSSLUG00000021639) nr2c2 (ENSSLUG00000021614) ENSSLUG00000021608 #22 wdr46 (ENSSLUG00000021597) #23 ENSSLUG00000021580 ENSSLUG00000021468 ENSSLUG00000021458 ogg1 (ENSSLUG00000021455) qars1 (ENSSLUG00000021327) QRICH1 (ENSSLUG00000021268) ENSSLUG00000021261 ENSSLUG00000021259 prickle2a (ENSSLUG00000021192) rho (ENSSLUG00000021180) MAGI1 (ENSSLUG00000021146) ren (ENSSLUG00000021135) csf1b (ENSSLUG00000021130) FMOD (ENSSLUG00000021124) Channel bull blenny MODERN SPECIES 21 BRPF1 (ENSCGOG00000003910) ENSCGOG00000003987 ENSCGOG00000003995 ENSCGOG00000003996 CRELD1 (ENSCGOG00000004006) ENSCGOG00000004154 ENSCGOG00000004161 IFT122 (ENSCGOG00000004195) exorh (ENSCGOG00000004974) PLXND1 (ENSCGOG00000005002) TMCC1 (ENSCGOG00000005176) trh (ENSCGOG00000005180) RBSN (ENSCGOG00000005194) mrps25 (ENSCGOG00000005370) nr2c2 (ENSCGOG00000005378) ENSCGOG00000005438 #22 wdr46 (ENSCGOG00000005451) #23 ENSCGOG00000005490 ENSCGOG00000005496 ENSCGOG00000005506 ENSCGOG00000005517 ogg1 (ENSCGOG00000005521) qars1 (ENSCGOG00000005587) QRICH1 (ENSCGOG00000007379) ENSCGOG00000007388 prickle2a (ENSCGOG00000007391) rho (ENSCGOG00000007398) MAGI1 (ENSCGOG00000007405) ren (ENSCGOG00000007421) csf1b (ENSCGOG00000007422) FMOD (ENSCGOG00000007427) Cottioidei ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b.g ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00940000157261.k.b ENSGT00550000074865 Stickleback MODERN SPECIES 11 gpd1a (ENSGACG00000003068) G6PD (ENSGACG00000003056) ADCY6 (ENSGACG00000003042) cacnb3a (ENSGACG00000003036) ddx23 (ENSGACG00000003024) rnd1a (ENSGACG00000003002) ENSGACG00000002997 ENSGACG00000002993 ENSGACG00000002990 ENSGACG00000002985 TMCC1 (ENSGACG00000002982) trh (ENSGACG00000002980) RBSN (ENSGACG00000002965) mrps25 (ENSGACG00000002961) nr2c2 (ENSGACG00000002941) B3GALT4 (ENSGACG00000002938) #22 wdr46 (ENSGACG00000002926) #23 sult1st3 (ENSGACG00000002907) ENSGACG00000002903 ogg1 (ENSGACG00000002899) qars1 (ENSGACG00000002887) QRICH1 (ENSGACG00000002881) ENSGACG00000002876 ENSGACG00000002873 prickle2a (ENSGACG00000002865) ENSGACG00000002862 MAGI1 (ENSGACG00000002852) ren (ENSGACG00000002847) csf1b (ENSGACG00000002844) FMOD (ENSGACG00000002840) mapkapk2b (ENSGACG00000002830) Lumpfish MODERN SPECIES 22 ENSCLMG00005019090 BRPF1 (ENSCLMG00005019092) ENSCLMG00005019103 ENSCLMG00005019104 CRELD1 (ENSCLMG00005019105) ENSCLMG00005019107 ENSCLMG00005019108 IFT122 (ENSCLMG00005019109) exorh (ENSCLMG00005002977) PLXND1 (ENSCLMG00005003063) TMCC1 (ENSCLMG00005003612) trh (ENSCLMG00005003615) RBSN (ENSCLMG00005003623) mrps25 (ENSCLMG00005003863) nr2c2 (ENSCLMG00005003864) B3GALT4 (ENSCLMG00005003866) #22 wdr46 (ENSCLMG00005003869) #23 sult1st3 (ENSCLMG00005003979) ENSCLMG00005003982 ogg1 (ENSCLMG00005003983) qars1 (ENSCLMG00005003995) QRICH1 (ENSCLMG00005004174) ENSCLMG00005004175 ENSCLMG00005004176 prickle2a (ENSCLMG00005004177) ENSCLMG00005004191 rho (ENSCLMG00005004192) MAGI1 (ENSCLMG00005004193) ren (ENSCLMG00005004194) csf1b (ENSCLMG00005004196) FMOD (ENSCLMG00005004224) Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a Oryzias ANCESTRAL SPECIES 4 ENSGT00940000164282.a ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.u ENSGT00940000163342.a.b.a.a.v ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 Oryzias_b ANCESTRAL SPECIES 2 ENSGT00940000164282.a ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.u ENSGT00940000163342.a.b.a.a.v ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 Indian medaka MODERN SPECIES 23 ENSOMEG00000008590 BRPF1 (ENSOMEG00000008644) ENSOMEG00000008694 ENSOMEG00000008746 CRELD1 (ENSOMEG00000008795) ENSOMEG00000008819 IFT122 (ENSOMEG00000008964) exorh (ENSOMEG00000009015) PLXND1 (ENSOMEG00000009160) TMCC1 (ENSOMEG00000009233) trh (ENSOMEG00000009262) RBSN (ENSOMEG00000009298) mrps25 (ENSOMEG00000009352) nr2c2 (ENSOMEG00000009402) ENSOMEG00000009432 ENSOMEG00000009439 #22 wdr46 (ENSOMEG00000009465) #23 ENSOMEG00000009482 ENSOMEG00000009497 ENSOMEG00000009518 ENSOMEG00000009533 ogg1 (ENSOMEG00000009550) qars1 (ENSOMEG00000009629) QRICH1 (ENSOMEG00000009708) ENSOMEG00000009735 ENSOMEG00000009751 ENSOMEG00000009774 prickle2a (ENSOMEG00000009828) rho (ENSOMEG00000010155) MAGI1 (ENSOMEG00000010364) ren (ENSOMEG00000010462) Javanese ricefish MODERN SPECIES 21 ENSOJAG00000008248 BRPF1 (ENSOJAG00000008182) ENSOJAG00000008169 ENSOJAG00000008157 CRELD1 (ENSOJAG00000008031) ENSOJAG00000007990 IFT122 (ENSOJAG00000005486) exorh (ENSOJAG00000005343) PLXND1 (ENSOJAG00000004987) TMCC1 (ENSOJAG00000004917) ENSOJAG00000004905 trh (ENSOJAG00000004879) RBSN (ENSOJAG00000004715) mrps25 (ENSOJAG00000004674) nr2c2 (ENSOJAG00000004240) ENSOJAG00000004201 #22 wdr46 (ENSOJAG00000004006) #23 ENSOJAG00000003944 ENSOJAG00000003901 ENSOJAG00000021351 ogg1 (ENSOJAG00000021331) qars1 (ENSOJAG00000021167) QRICH1 (ENSOJAG00000021145) ENSOJAG00000021135 ENSOJAG00000021128 ENSOJAG00000021107 prickle2a (ENSOJAG00000021097) rho (ENSOJAG00000021091) MAGI1 (ENSOJAG00000021039) ren (ENSOJAG00000021013) csf1b (ENSOJAG00000021003) Oryzias_a ANCESTRAL SPECIES ENSGT00940000164282.a ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.u ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000027702 ENSORLG00000011157 brpf1 (ENSORLG00000011135) ENSORLG00000026604 ENSORLG00000025205 CRELD1 (ENSORLG00000011083) ENSORLG00000011049 IFT122 (ENSORLG00000011039) exorh (ENSORLG00000010979) PLXND1 (ENSORLG00000010969) TMCC1 (ENSORLG00000010939) trh (ENSORLG00000010934) RBSN (ENSORLG00000010921) mrps25 (ENSORLG00000010890) nr2c2 (ENSORLG00000010877) ENSORLG00000010842 #22 wdr46 (ENSORLG00000010831) #23 sult1st3 (ENSORLG00000010795) ENSORLG00000010801 ENSORLG00000027427 ogg1 (ENSORLG00000010758) qars1 (ENSORLG00000010737) QRICH1 (ENSORLG00000010668) ENSORLG00000029590 ENSORLG00000010636 prickle2a (ENSORLG00000010626) rho (ENSORLG00000010599) MAGI1 (ENSORLG00000010588) ren (ENSORLG00000010506) csf1b (ENSORLG00000010501) ENSORLG00000023753 Chinese medaka MODERN SPECIES 499 FMOD (ENSOSIG00000019069) csf1b (ENSOSIG00000019068) ren (ENSOSIG00000019064) MAGI1 (ENSOSIG00000018149) rho (ENSOSIG00000018058) prickle2a (ENSOSIG00000018051) ENSOSIG00000018045 qars1 (ENSOSIG00000015053) ogg1 (ENSOSIG00000015031) ENSOSIG00000015030 ENSOSIG00000015027 ENSOSIG00000015025 RBSN (ENSOSIG00000015023) mrps25 (ENSOSIG00000015019) nr2c2 (ENSOSIG00000014182) ENSOSIG00000014178 #22 wdr46 (ENSOSIG00000014177) #23 Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00730000111286 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT01030000234648.a.a.c.b ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Poeciliinae ANCESTRAL SPECIES 2 ENSGT01030000234648.a.a.c.b ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d.a ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Poecilia ANCESTRAL SPECIES 14 ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d.a ENSGT00940000155514.d.b ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.eb ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b NAME_6 ANCESTRAL SPECIES 42 ENSGT00940000155514.d.b ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.eb ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Sailfin molly MODERN SPECIES 1819 DOCK3 (ENSPLAG00000014042) DCAF1 (ENSPLAG00000013974) ssuh2rs1 (ENSPLAG00000013898) rpl32 (ENSPLAG00000013873) grip2a (ENSPLAG00000013860) ENSPLAG00000013821 ABTB1 (ENSPLAG00000013783) dnase1l4.1 (ENSPLAG00000013753) ENSPLAG00000013736 RBSN (ENSPLAG00000013723) mrps25 (ENSPLAG00000013689) nr2c2 (ENSPLAG00000013675) ENSPLAG00000013637 #22 wdr46 (ENSPLAG00000013622) #23 ENSPLAG00000013605 ENSPLAG00000013574 Amazon molly MODERN SPECIES 385 DOCK3 (ENSPFOG00000010285) DCAF1 (ENSPFOG00000010529) ssuh2rs1 (ENSPFOG00000010665) rpl32 (ENSPFOG00000010812) grip2a (ENSPFOG00000010843) ENSPFOG00000011115 ABTB1 (ENSPFOG00000011382) dnase1l4.1 (ENSPFOG00000011443) ENSPFOG00000011524 RBSN (ENSPFOG00000011576) mrps25 (ENSPFOG00000011720) nr2c2 (ENSPFOG00000011747) ENSPFOG00000020468 #22 wdr46 (ENSPFOG00000011880) #23 ENSPFOG00000022022 ENSPFOG00000012047 ENSPFOG00000011991 ENSPFOG00000012069 ENSPFOG00000012073 ogg1 (ENSPFOG00000012077) qars1 (ENSPFOG00000012143) QRICH1 (ENSPFOG00000012427) ENSPFOG00000012521 ENSPFOG00000012526 prickle2a (ENSPFOG00000012548) rho (ENSPFOG00000020469) ENSPFOG00000020470 MAGI1 (ENSPFOG00000012659) Guppy MODERN SPECIES 459 GRM7 (ENSPREG00000017411) DAG1 (ENSPREG00000017395) pcbp4 (ENSPREG00000017370) DOCK3 (ENSPREG00000017294) DCAF1 (ENSPREG00000017242) ssuh2rs1 (ENSPREG00000017189) rpl32 (ENSPREG00000017173) grip2a (ENSPREG00000017079) ENSPREG00000017002 ABTB1 (ENSPREG00000016953) dnase1l4.1 (ENSPREG00000016864) ENSPREG00000016784 RBSN (ENSPREG00000016737) mrps25 (ENSPREG00000016711) nr2c2 (ENSPREG00000016689) ENSPREG00000016683 #22 wdr46 (ENSPREG00000016613) #23 ENSPREG00000016595 ENSPREG00000016468 ENSPREG00000016400 ENSPREG00000016386 ogg1 (ENSPREG00000016339) qars1 (ENSPREG00000016290) prickle2a (ENSPREG00000016262) rho (ENSPREG00000016208) MAGI1 (ENSPREG00000016168) ren (ENSPREG00000016088) csf1b (ENSPREG00000016049) FMOD (ENSPREG00000015996) eif2d (ENSPREG00000015967) ENSPREG00000015953 Platyfish MODERN SPECIES GRM7 (ENSXMAG00000026455) DAG1 (ENSXMAG00000015708) pcbp4 (ENSXMAG00000024530) DOCK3 (ENSXMAG00000015718) DCAF1 (ENSXMAG00000015781) ssuh2rs1 (ENSXMAG00000015790) rpl32 (ENSXMAG00000021671) grip2a (ENSXMAG00000015803) ENSXMAG00000015832 ABTB1 (ENSXMAG00000015862) dnase1l4.1 (ENSXMAG00000006848) ENSXMAG00000006874 RBSN (ENSXMAG00000015881) mrps25 (ENSXMAG00000023324) nr2c2 (ENSXMAG00000015890) ENSXMAG00000025003 #22 wdr46 (ENSXMAG00000029925) #23 ENSXMAG00000015904 ENSXMAG00000022225 ENSXMAG00000015924 ENSXMAG00000024292 ogg1 (ENSXMAG00000015928) qars1 (ENSXMAG00000015931) QRICH1 (ENSXMAG00000015947) ENSXMAG00000015969 prickle2a (ENSXMAG00000029369) rho (ENSXMAG00000019635) MAGI1 (ENSXMAG00000016982) ren (ENSXMAG00000017042) csf1b (ENSXMAG00000017069) eif2d (ENSXMAG00000014696) NAME_4 ANCESTRAL SPECIES 87 ENSGT01030000234648.a.a.c.b ENSGT00390000008429.e.b ENSGT00940000159711.h ENSGT00940000155514.d ENSGT00390000005874.i ENSGT00940000163873.c.a ENSGT00940000158890 ENSGT00940000155615.i.b ENSGT00940000154583.e.b ENSGT00390000017131 ENSGT00950000182846.a.a.b.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Sheepshead minnow MODERN SPECIES 405 GRM7 (ENSCVAG00000013126) DAG1 (ENSCVAG00000013102) pcbp4 (ENSCVAG00000013090) DOCK3 (ENSCVAG00000012989) DCAF1 (ENSCVAG00000012818) ssuh2rs1 (ENSCVAG00000012652) rpl32 (ENSCVAG00000012560) grip2a (ENSCVAG00000012544) SLC6A6 (ENSCVAG00000012487) ABTB1 (ENSCVAG00000012449) ENSCVAG00000012406 ENSCVAG00000012395 mrps25 (ENSCVAG00000012389) RBSN (ENSCVAG00000012378) nr2c2 (ENSCVAG00000012369) ENSCVAG00000012295 #22 wdr46 (ENSCVAG00000012283) #23 ENSCVAG00000012273 ENSCVAG00000012266 ENSCVAG00000012245 ENSCVAG00000012239 ogg1 (ENSCVAG00000012226) qars1 (ENSCVAG00000012209) QRICH1 (ENSCVAG00000012043) ENSCVAG00000012027 prickle2a (ENSCVAG00000012013) rho (ENSCVAG00000011962) MAGI1 (ENSCVAG00000011941) ren (ENSCVAG00000011718) ENSCVAG00000011610 Mummichog MODERN SPECIES 1981 ENSFHEG00000002902 #22 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Mangrove rivulus MODERN SPECIES 13 ENSKMAG00000014704 BRPF1 (ENSKMAG00000014768) ENSKMAG00000014832 ENSKMAG00000014963 CRELD1 (ENSKMAG00000014995) ENSKMAG00000015015 IFT122 (ENSKMAG00000015070) exorh (ENSKMAG00000015211) PLXND1 (ENSKMAG00000015247) TMCC1 (ENSKMAG00000015294) ENSKMAG00000015318 trh (ENSKMAG00000015345) RBSN (ENSKMAG00000015370) mrps25 (ENSKMAG00000015394) nr2c2 (ENSKMAG00000015414) B3GALT4 (ENSKMAG00000015442) #22 wdr46 (ENSKMAG00000015454) #23 ENSKMAG00000015482 ENSKMAG00000015514 ENSKMAG00000015529 ENSKMAG00000015568 ENSKMAG00000015654 ENSKMAG00000015676 ogg1 (ENSKMAG00000015692) qars1 (ENSKMAG00000015716) QRICH1 (ENSKMAG00000015803) ENSKMAG00000015831 prickle2a (ENSKMAG00000015859) rho (ENSKMAG00000016002) MAGI1 (ENSKMAG00000016402) ren (ENSKMAG00000016620) Turquoise killifish MODERN SPECIES 1624 MMP19 (ENSNFUG00015022487) Nfu_g_1_001587 (ENSNFUG00015022482) CABZ01084942.1 (ENSNFUG00015022478) ocstamp (ENSNFUG00015022476) SLC13A3 (ENSNFUG00015022459) PAR1 (ENSNFUG00015022454) MBD4 (ENSNFUG00015022452) IFT122 (ENSNFUG00015022257) RHO (ENSNFUG00015022237) PLXND1 (ENSNFUG00015021954) TMCC1 (ENSNFUG00015021913) ENSNFUG00015021911 ZFYVE20 (ENSNFUG00015021902) MRPS25 (ENSNFUG00015021896) nr2c2 (ENSNFUG00015021858) ENSNFUG00015021850 #22 WDR46 (ENSNFUG00015021745) #23 XKR7 (ENSNFUG00015021734) CCM2L (ENSNFUG00015021731) CABLES2B (ENSNFUG00015021730) jph2 (ENSNFUG00015021726) ENSNFUG00015021724 CABZ01112331.1 (ENSNFUG00015021717) RND1 (ENSNFUG00015021714) ENSNFUG00015021712 DDX23 (ENSNFUG00015021669) cacnb3a (ENSNFUG00015020935) ADCY6A (ENSNFUG00015019862) ENSNFUG00015019803 G6PD (ENSNFUG00015018525) GPD1A (ENSNFUG00015018465) Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a.d ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Cichlidae ANCESTRAL SPECIES ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.b.a.d.b.b.a.b.b ENSGT00940000163342.b.a.d.b.a ENSGT00940000163342.b.a.d.b.b.a.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.t.b ENSGT00940000163342.b.a.c.b ENSGT00940000163342.a.b.a.a.t.a ENSGT00940000163342.b.a.d.b.b.a.b.b ENSGT00940000163342.b.a.d.b.b.a.b.a ENSGT00940000163342.b.a.d.b.b.b.a ENSGT00940000163342.b.a.d.b.a.a ENSGT00940000163342.b.a.d.b.b.a.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.t.b ENSGT00940000163342.b.a.c.b ENSGT00940000163342.a.b.a.a.t.a ENSGT00940000163342.b.a.d.b.b.a.b.b ENSGT00940000163342.b.a.d.b.b.a.b.a ENSGT00940000163342.b.a.d.b.b.b.a ENSGT00940000163342.b.a.d.b.b.b.b ENSGT00940000163342.b.a.d.b.a.a ENSGT00940000163342.b.a.d.b.b.a.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.t.b ENSGT00940000163342.b.a.c.b ENSGT00940000163342.a.b.a.a.t.a ENSGT00940000163342.b.a.d.b.b.a.b.b ENSGT00940000163342.b.a.d.b.b.a.b.a ENSGT00940000163342.b.a.d.b.b.b.a.b.b ENSGT00940000163342.b.a.d.b.b.b.b ENSGT00940000163342.b.a.d.b.a.a ENSGT00940000163342.b.a.d.b.b.a.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.t.b ENSGT00940000163342.a.b.a.a.t.a ENSGT00940000163342.b.a.d.b.b.a.b.b.c ENSGT00940000163342.b.a.d.b.b.a.b.b.d ENSGT00940000163342.b.a.d.b.b.a.b.a ENSGT00940000163342.b.a.d.b.b.b.a.b.b ENSGT00940000163342.b.a.d.b.b.b.b ENSGT00940000163342.b.a.d.b.a.a ENSGT00940000163342.b.a.d.b.b.a.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00660000097455 ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.t.b ENSGT00940000163342.a.b.a.a.t.a ENSGT00940000163342.b.a.d.b.b.a.b.b.c ENSGT00940000163342.b.a.d.b.b.b.a.b.b ENSGT00940000163342.b.a.d.b.b.b.b ENSGT00940000163342.b.a.d.b.a.a ENSGT00940000163342.b.a.d.b.b.a.a ENSGT00940000163342.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a Zebra mbuna MODERN SPECIES 1103 ENSMZEG00005025842 BRPF1 (ENSMZEG00005025832) ENSMZEG00005025826 ENSMZEG00005025823 CRELD1 (ENSMZEG00005025820) ENSMZEG00005025818 ENSMZEG00005025816 IFT122 (ENSMZEG00005025809) exorh (ENSMZEG00005000753) PLXND1 (ENSMZEG00005000320) TMCC1 (ENSMZEG00005000257) trh (ENSMZEG00005000237) RBSN (ENSMZEG00005000219) mrps25 (ENSMZEG00005000200) nr2c2 (ENSMZEG00005000121) B3GALT4 (ENSMZEG00005000102) #22 wdr46 (ENSMZEG00005000085) #23 ENSMZEG00005000074 ENSMZEG00005024885 ENSMZEG00005024231 ENSMZEG00005024223 ENSMZEG00005024218 ENSMZEG00005024213 ENSMZEG00005024212 ENSMZEG00005024209 ENSMZEG00005024206 ogg1 (ENSMZEG00005024202) qars1 (ENSMZEG00005024193) QRICH1 (ENSMZEG00005024186) ENSMZEG00005024184 ENSMZEG00005024180 P. nyererei MODERN SPECIES 531 ENSPNYG00000005498 BRPF1 (ENSPNYG00000005540) ENSPNYG00000005584 ENSPNYG00000005617 CRELD1 (ENSPNYG00000005664) ENSPNYG00000005693 ENSPNYG00000005711 IFT122 (ENSPNYG00000005734) exorh (ENSPNYG00000006451) PLXND1 (ENSPNYG00000010311) TMCC1 (ENSPNYG00000010356) trh (ENSPNYG00000010407) RBSN (ENSPNYG00000010478) mrps25 (ENSPNYG00000010498) nr2c2 (ENSPNYG00000010516) B3GALT4 (ENSPNYG00000010537) #22 wdr46 (ENSPNYG00000010545) #23 ENSPNYG00000010568 ENSPNYG00000010662 ENSPNYG00000011148 ENSPNYG00000011799 ENSPNYG00000011813 Burton s mouthbrooder MODERN SPECIES 527 ENSHBUG00000022254 BRPF1 (ENSHBUG00000022319) ENSHBUG00000022337 ENSHBUG00000022349 CRELD1 (ENSHBUG00000022362) ENSHBUG00000022374 ENSHBUG00000022401 IFT122 (ENSHBUG00000022481) exorh (ENSHBUG00000022500) PLXND1 (ENSHBUG00000022641) TMCC1 (ENSHBUG00000022747) trh (ENSHBUG00000022787) RBSN (ENSHBUG00000022796) mrps25 (ENSHBUG00000022813) nr2c2 (ENSHBUG00000022856) B3GALT4 (ENSHBUG00000022866) #22 wdr46 (ENSHBUG00000022883) #23 ENSHBUG00000022891 ENSHBUG00000022910 ENSHBUG00000022930 ENSHBUG00000022953 Lyretail cichlid MODERN SPECIES 334 ENSNBRG00000021634 BRPF1 (ENSNBRG00000021603) ENSNBRG00000021566 ENSNBRG00000021534 CRELD1 (ENSNBRG00000021509) ENSNBRG00000021489 ENSNBRG00000021469 IFT122 (ENSNBRG00000021383) exorh (ENSNBRG00000019945) PLXND1 (ENSNBRG00000019706) TMCC1 (ENSNBRG00000019669) trh (ENSNBRG00000019607) RBSN (ENSNBRG00000019589) mrps25 (ENSNBRG00000019573) nr2c2 (ENSNBRG00000019536) B3GALT4 (ENSNBRG00000019529) #22 wdr46 (ENSNBRG00000019455) #23 ENSNBRG00000019272 ENSNBRG00000019227 ENSNBRG00000019220 ENSNBRG00000018980 ENSNBRG00000018938 ENSNBRG00000018334 ENSNBRG00000018164 ENSNBRG00000018146 ENSNBRG00000018129 ENSNBRG00000018121 ogg1 (ENSNBRG00000018078) qars1 (ENSNBRG00000018005) ENSNBRG00000017984 QRICH1 (ENSNBRG00000017950) Nile tilapia MODERN SPECIES 12 ENSONIG00000017202 BRPF1 (ENSONIG00000017204) ENSONIG00000037042 ENSONIG00000027927 CRELD1 (ENSONIG00000017206) ENSONIG00000039922 ENSONIG00000017212 IFT122 (ENSONIG00000017213) exorh (ENSONIG00000017219) PLXND1 (ENSONIG00000017220) TMCC1 (ENSONIG00000017228) trh (ENSONIG00000017229) RBSN (ENSONIG00000017232) mrps25 (ENSONIG00000017238) nr2c2 (ENSONIG00000017240) B3GALT4 (ENSONIG00000021141) #22 wdr46 (ENSONIG00000017243) #23 sult1st3 (ENSONIG00000039142) ENSONIG00000028103 ENSONIG00000017258 ENSONIG00000043155 ENSONIG00000039507 ENSONIG00000039747 ENSONIG00000042997 ogg1 (ENSONIG00000017261) qars (ENSONIG00000038539) QRICH1 (ENSONIG00000017265) ENSONIG00000017271 prickle2a (ENSONIG00000017272) rho (ENSONIG00000021142) MAGI1 (ENSONIG00000017273) Midas cichlid MODERN SPECIES 732 ENSACIG00000004211 WNK2 (ENSACIG00000004233) BRPF1 (ENSACIG00000004291) ENSACIG00000004329 ENSACIG00000004345 CRELD1 (ENSACIG00000004374) ENSACIG00000004411 ENSACIG00000004429 IFT122 (ENSACIG00000004449) exorh (ENSACIG00000004619) PLXND1 (ENSACIG00000007593) trh (ENSACIG00000007687) RBSN (ENSACIG00000007763) mrps25 (ENSACIG00000007796) nr2c2 (ENSACIG00000007808) ENSACIG00000007847 #22 wdr46 (ENSACIG00000007854) #23 Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a ENSGT00940000163342.a.b.a.b.b ENSGT00940000163342.b.a.c.a ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000164079 ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b Pomacentridae_A ANCESTRAL SPECIES 200 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.o ENSGT00940000163342.a.b.a.b.b Amphiprion ANCESTRAL SPECIES 216 ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.a.a.o ENSGT00940000163342.a.b.a.b.b ENSGT00390000011466 ENSGT00940000155606.b ENSGT00940000158666.a.b Clown anemonefish MODERN SPECIES 1063 CRELD1 (ENSAOCG00000001153) ENSAOCG00000016643 ENSAOCG00000001157 IFT122 (ENSAOCG00000016754) exorh (ENSAOCG00000016801) PLXND1 (ENSAOCG00000016853) TMCC1 (ENSAOCG00000016898) trh (ENSAOCG00000016914) RBSN (ENSAOCG00000016994) mrps25 (ENSAOCG00000017022) nr2c2 (ENSAOCG00000017082) ENSAOCG00000017093 #22 wdr46 (ENSAOCG00000001181) #23 ENSAOCG00000017147 ENSAOCG00000017164 ENSAOCG00000017266 prim1 (ENSAOCG00000017330) ddx23 (ENSAOCG00000017348) rnd1a (ENSAOCG00000017378) Orange clownfish MODERN SPECIES 22 ENSAPEG00000015823 ENSAPEG00000015886 BRPF1 (ENSAPEG00000015943) ENSAPEG00000016042 CRELD1 (ENSAPEG00000016084) ENSAPEG00000016109 ENSAPEG00000016131 IFT122 (ENSAPEG00000016146) exorh (ENSAPEG00000016240) PLXND1 (ENSAPEG00000016271) TMCC1 (ENSAPEG00000016424) trh (ENSAPEG00000016502) RBSN (ENSAPEG00000016516) mrps25 (ENSAPEG00000016566) nr2c2 (ENSAPEG00000016591) ENSAPEG00000016647 #22 wdr46 (ENSAPEG00000016705) #23 ENSAPEG00000016715 ENSAPEG00000016725 ENSAPEG00000016764 ENSAPEG00000016775 prim1 (ENSAPEG00000016812) ddx23 (ENSAPEG00000016857) rnd1a (ENSAPEG00000016875) cacnb3a (ENSAPEG00000016908) ADCY6 (ENSAPEG00000016959) ENSAPEG00000017043 G6PD (ENSAPEG00000017119) gpd1a (ENSAPEG00000017158) asic1a (ENSAPEG00000017194) spryd4 (ENSAPEG00000017282) Spiny chromis MODERN SPECIES 57 ENSAPOG00000021574 ENSAPOG00000021626 COQ8A (ENSAPOG00000021640) STUM (ENSAPOG00000001019) ENSAPOG00000021661 ENSAPOG00000021668 IFT122 (ENSAPOG00000021814) exorh (ENSAPOG00000021829) PLXND1 (ENSAPOG00000021880) TMCC1 (ENSAPOG00000021915) trh (ENSAPOG00000021930) RBSN (ENSAPOG00000021975) mrps25 (ENSAPOG00000022005) nr2c2 (ENSAPOG00000022068) ENSAPOG00000000627 B3GALT4 (ENSAPOG00000022095) #22 ENSAPOG00000022109 rad51d (ENSAPOG00000022131) tmem132e (ENSAPOG00000022142) Bicolor damselfish MODERN SPECIES 854 ENSSPAG00000020262 ENSSPAG00000020242 CRELD1 (ENSSPAG00000020232) IFT122 (ENSSPAG00000020175) exorh (ENSSPAG00000012452) ENSSPAG00000011896 ENSSPAG00000011874 TMCC1 (ENSSPAG00000011820) trh (ENSSPAG00000011774) RBSN (ENSSPAG00000011709) mrps25 (ENSSPAG00000011672) nr2c2 (ENSSPAG00000011625) ENSSPAG00000011618 #22 wdr46 (ENSSPAG00000011591) #23 ENSSPAG00000011310 ENSSPAG00000011240 ENSSPAG00000010964 ENSSPAG00000010926 ENSSPAG00000010910 ogg1 (ENSSPAG00000010888) qars1 (ENSSPAG00000010803) QRICH1 (ENSSPAG00000010733) ENSSPAG00000010714 ENSSPAG00000010701 prickle2a (ENSSPAG00000010614) Cod MODERN SPECIES ENSGMOG00000035251 ENSGMOG00000017543 ENSGMOG00000032403 ENSGMOG00000026224 ENSGMOG00000017600 ENSGMOG00000032033 ENSGMOG00000013830 IFT122 (ENSGMOG00000026380) exorh (ENSGMOG00000013755) PLXND1 (ENSGMOG00000018236) TMCC1 (ENSGMOG00000033131) trh (ENSGMOG00000017121) ENSGMOG00000017086 mrps25 (ENSGMOG00000017071) nr2c2 (ENSGMOG00000017040) ENSGMOG00000022246 #22 wdr46 (ENSGMOG00000017015) #23 ENSGMOG00000024772 ENSGMOG00000016998 ENSGMOG00000016964 ENSGMOG00000002124 ENSGMOG00000036454 ENSGMOG00000030380 ENSGMOG00000032214 ENSGMOG00000016907 ENSGMOG00000016875 ENSGMOG00000016855 ENSGMOG00000031632 prickle2a (ENSGMOG00000016816) ENSGMOG00000031308 ENSGMOG00000020380 Protacanthopterygii ANCESTRAL SPECIES 37 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00660000097455 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.b.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a.a ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000157007.i.a ENSGT00940000157261.k.b ENSGT00550000074865 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 160 ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b.f.b ENSGT00940000157794.n ENSGT00940000161421.r ENSGT00940000168503.B ENSGT00940000160255.i ENSGT00390000001016.b.i ENSGT01030000234549.a.a.a.a.a.b.b.b.e ENSGT01020000230394.e.b.a.j.b ENSGT00940000155189.pb.b.b ENSGT00390000016951.e ENSGT00940000158219.a ENSGT00390000007159.d ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798.`b #22 ENSGT00390000007075.e #23 ENSGT00940000163342.a.b.b.e ENSGT00940000163342.a.b.b.f ENSGT00730000111360.a.c ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00940000154814.b.oc ENSGT00390000016228.b.a ENSGT00940000153629.a.a.a.d ENSGT01030000234549.a.a.a.a.a.b.b.a.a ENSGT00940000155820.b.c ENSGT00940000157898.j ENSGT00390000015805.b.d ENSGT00940000157007.i.a Huchen MODERN SPECIES 1239 ENSHHUG00000015077 ENSHHUG00000015090 CRELD1 (ENSHHUG00000015131) IFT122 (ENSHHUG00000015168) RHO (ENSHHUG00000015650) PLXND1 (ENSHHUG00000015893) TMCC1 (ENSHHUG00000015908) ENSHHUG00000015917 trh (ENSHHUG00000015933) ENSHHUG00000015936 RBSN (ENSHHUG00000015942) mrps25 (ENSHHUG00000015950) nr2c2 (ENSHHUG00000015960) ENSHHUG00000016008 #22 wdr46 (ENSHHUG00000016021) #23 ENSHHUG00000016037 ENSHHUG00000016148 ENSHHUG00000016163 ogg1 (ENSHHUG00000016171) qars1 (ENSHHUG00000016189) QRICH1 (ENSHHUG00000016451) ENSHHUG00000016472 ENSHHUG00000016474 Salmoninae_a ANCESTRAL SPECIES 26 ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b.f.b ENSGT00940000157794.n ENSGT00940000161421.r ENSGT00940000168503.B ENSGT00940000160255.i ENSGT00390000001016.b.i ENSGT01030000234549.a.a.a.a.a.b.b.b.e ENSGT01020000230394.e.b.a.j.b ENSGT00940000155189.pb.b.b ENSGT00390000016951.e ENSGT00940000158219.a ENSGT00390000007159.d ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798.`b #22 ENSGT00390000007075.e #23 ENSGT00940000163342.a.b.b.e.a.a ENSGT00940000163342.a.b.b.e.a.b ENSGT00940000163342.a.b.b.f ENSGT00730000111360.a.c ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b.a ENSGT00940000153629.a.a.a.d ENSGT01030000234549.a.a.a.a.a.b.b.a.a ENSGT00940000155820.b.c ENSGT00940000157898.j ENSGT00390000015805.b.d ENSGT00940000157007.i.a Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000164282.a.a ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b.f.b ENSGT00940000157794.n ENSGT00940000161421.r ENSGT00940000168503.B ENSGT00940000160255.i ENSGT00390000001016.b.i ENSGT01020000230394.e.b.a.j.b ENSGT00940000155189.pb.b.b ENSGT00390000016951.e ENSGT00940000158219.a ENSGT00390000007159.d ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798.`b #22 ENSGT00390000007075.e #23 ENSGT00940000163342.a.b.b.e.a.a.a ENSGT00940000163342.a.b.b.e.a.b ENSGT00940000163342.a.b.b.f ENSGT00730000111360.a.c ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b.a ENSGT00940000153629.a.a.a.d ENSGT01030000234549.a.a.a.a.a.b.b.a.a ENSGT00940000155820.b.c ENSGT00940000157898.j ENSGT00390000015805.b.d ENSGT00940000157261.k.b.c Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000164282.a.a ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b.f.b ENSGT00940000157794.n ENSGT00940000161421.r ENSGT00940000168503.B ENSGT00940000160255.i ENSGT00390000001016.b.i ENSGT01020000230394.e.b.a.j.b ENSGT00940000155189.pb.b.b ENSGT00390000016951.e ENSGT00940000158219.a ENSGT00390000007159.d ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798.`b #22 ENSGT00390000007075.e #23 ENSGT00940000163342.a.b.b.e.b ENSGT00940000163342.a.b.b.e.a.b ENSGT00730000111360.a.c ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b.a ENSGT00940000153629.a.a.a.d ENSGT01030000234549.a.a.a.a.a.b.b.a.a ENSGT00940000155820.b.c ENSGT00940000157898.j ENSGT00390000015805.b.d ENSGT00940000157261.k.b.c ENSGT00550000074865.j Chinook salmon MODERN SPECIES 14 ENSOTSG00005028447 ENSOTSG00005028449 ENSOTSG00005028450 BRPF1 (ENSOTSG00005028451) ENSOTSG00005028452 ENSOTSG00005028453 CRELD1 (ENSOTSG00005028455) IFT122 (ENSOTSG00005028482) PLXND1 (ENSOTSG00005032355) ENSOTSG00005032361 trh (ENSOTSG00005032366) ENSOTSG00005032370 RBSN (ENSOTSG00005032374) mrps25 (ENSOTSG00005032376) nr2c2 (ENSOTSG00005032379) B3GALT4 (ENSOTSG00005033054) #22 wdr46 (ENSOTSG00005033056) #23 ENSOTSG00005033134 ENSOTSG00005033167 ENSOTSG00005033168 ogg1 (ENSOTSG00005033170) qars1 (ENSOTSG00005033175) QRICH1 (ENSOTSG00005036390) ENSOTSG00005036393 prickle2a (ENSOTSG00005036394) rho (ENSOTSG00005036395) MAGI1 (ENSOTSG00005036397) ren (ENSOTSG00005036679) ENSOTSG00005037103 mapkapk2b (ENSOTSG00005037107) ENSOTSG00005037110 Coho salmon MODERN SPECIES 16 ENSOKIG00005018389 ENSOKIG00005018415 ENSOKIG00005018461 BRPF1 (ENSOKIG00005018645) ENSOKIG00005018817 ENSOKIG00005018841 CRELD1 (ENSOKIG00005018885) IFT122 (ENSOKIG00005019097) PLXND1 (ENSOKIG00005022004) ENSOKIG00005022166 mrps25 (ENSOKIG00005022188) trh (ENSOKIG00005022200) ENSOKIG00005022226 RBSN (ENSOKIG00005022235) nr2c2 (ENSOKIG00005022281) ENSOKIG00005023072 #22 wdr46 (ENSOKIG00005023089) #23 ENSOKIG00005023167 ENSOKIG00005023330 ENSOKIG00005023411 ogg1 (ENSOKIG00005023434) qars1 (ENSOKIG00005023491) QRICH1 (ENSOKIG00005025765) ENSOKIG00005006173 prickle2a (ENSOKIG00005006218) rho (ENSOKIG00005006244) MAGI1 (ENSOKIG00005006281) REN (ENSOKIG00005006402) ENSOKIG00005006474 mapkapk2b (ENSOKIG00005006524) ENSOKIG00005006940 Rainbow trout MODERN SPECIES 7 ENSOMYG00000055939 ENSOMYG00000057368 ENSOMYG00000032522 ENSOMYG00000032533 ift122 (ENSOMYG00000032634) PLXND1 (ENSOMYG00000033026) ENSOMYG00000064032 ENSOMYG00000033065 trh (ENSOMYG00000033088) ENSOMYG00000033103 ENSOMYG00000033128 mrps25 (ENSOMYG00000033140) ENSOMYG00000066076 ENSOMYG00000060283 nr2c2 (ENSOMYG00000033215) ENSOMYG00000033511 #22 wdr46 (ENSOMYG00000033533) #23 ENSOMYG00000033620 ENSOMYG00000033696 ENSOMYG00000033881 ENSOMYG00000033867 ENSOMYG00000033900 qars1 (ENSOMYG00000033968) ENSOMYG00000034441 ENSOMYG00000034465 prickle2a (ENSOMYG00000034488) rho (ENSOMYG00000034515) ENSOMYG00000034539 ENSOMYG00000034641 csf1-2 (ENSOMYG00000034839) ENSOMYG00000034995 Salmo ANCESTRAL SPECIES 4 ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b.f.b ENSGT00940000157794.n ENSGT00940000161421.r ENSGT00940000168503.B ENSGT00940000160255.i ENSGT00390000001016.b.i ENSGT01030000234549.a.a.a.a.a.b.b.b.e ENSGT01020000230394.e.b.a.j.b ENSGT00940000155189.pb.b.b ENSGT00390000016951.e ENSGT00940000158219.a ENSGT00390000007159.d ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798.`b #22 ENSGT00390000007075.e #23 ENSGT00940000163342.a.b.b.e.a.a ENSGT00940000163342.a.b.b.e.a.b ENSGT00730000111360.a.c ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c.a ENSGT00390000016228.b.a ENSGT00940000153629.a.a.a.d ENSGT01030000234549.a.a.a.a.a.b.b.a.a ENSGT00940000155820.b.c ENSGT00940000157898.j ENSGT00390000015805.b.d ENSGT00940000157007.i.a ENSGT00940000157261.k.b.c River trout MODERN SPECIES 23 ENSSTUG00000007293 NINJ1 (ENSSTUG00000007320) WNK2 (ENSSTUG00000007335) BRPF1 (ENSSTUG00000007498) ENSSTUG00000007592 ENSSTUG00000007602 CRELD1 (ENSSTUG00000007614) IFT122 (ENSSTUG00000007689) PLXND1 (ENSSTUG00000009225) ENSSTUG00000009405 trh (ENSSTUG00000009415) ENSSTUG00000009428 RBSN (ENSSTUG00000009436) mrps25 (ENSSTUG00000009557) nr2c2 (ENSSTUG00000009579) ENSSTUG00000009753 #22 wdr46 (ENSSTUG00000009762) #23 ENSSTUG00000009782 ENSSTUG00000009871 ENSSTUG00000009961 ogg1 (ENSSTUG00000009971) qars1 (ENSSTUG00000010084) QRICH1 (ENSSTUG00000013207) ENSSTUG00000013221 rho (ENSSTUG00000013243) MAGI1 (ENSSTUG00000013270) ren (ENSSTUG00000013416) ENSSTUG00000013584 ENSSTUG00000013636 mapkapk2b (ENSSTUG00000013649) eif2d (ENSSTUG00000013871) Atlantic salmon MODERN SPECIES 4 ENSSSAG00000007466 ENSSSAG00000098234 ENSSSAG00000007436 ENSSSAG00000102076 ENSSSAG00000007212 ENSSSAG00000101866 IFT122 (ENSSSAG00000004394) RHO (ENSSSAG00000083338) PLXND1 (ENSSSAG00000079145) TMCC1 (ENSSSAG00000079133) trh (ENSSSAG00000079119) ENSSSAG00000084122 ENSSSAG00000079043 mrps25 (ENSSSAG00000079033) nr2c2 (ENSSSAG00000078763) ENSSSAG00000078743 #22 wdr46 (ENSSSAG00000078719) #23 st1s3 (ENSSSAG00000078712) ENSSSAG00000078689 ENSSSAG00000095223 ogg1 (ENSSSAG00000078670) qars (ENSSSAG00000078464) ENSSSAG00000078423 ENSSSAG00000078419 ENSSSAG00000122027 prickle2a (ENSSSAG00000078410) ENSSSAG00000078406 ENSSSAG00000078255 ENSSSAG00000078153 ENSSSAG00000078129 ENSSSAG00000078124 Salmoninae ANCESTRAL SPECIES 1349 ENSGT00940000161798.ab #22 ENSGT00390000007075.f #23 ENSGT00940000163342.a.b.a.b.a.a Huchen MODERN SPECIES 436 MAGI1 (ENSHHUG00000025899) prickle2a (ENSHHUG00000025892) ENSHHUG00000025882 ENSHHUG00000025881 ENSHHUG00000025876 ENSHHUG00000025875 RBSN (ENSHHUG00000025864) ENSHHUG00000025856 ENSHHUG00000025853 ENSHHUG00000025834 #22 wdr46 (ENSHHUG00000025746) #23 ENSHHUG00000025738 trh (ENSHHUG00000025730) ENSHHUG00000025715 ENSHHUG00000025709 Salmoninae_a ANCESTRAL SPECIES 128 ENSGT00940000157869.f ENSGT00940000155306.a.o.b ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c ENSGT00940000157898.i ENSGT00940000155820.b.d ENSGT00940000153629.a.a.a.c ENSGT00390000016228.b.b ENSGT01010000229500 ENSGT00730000111360.a.d ENSGT00390000007159.c ENSGT00940000161798.ab #22 ENSGT00390000016951.f ENSGT00940000155189.pb.b.a ENSGT01020000230394.e.b.a.j.a ENSGT01030000234549.a.a.a.a.a.b.b.b.f ENSGT00390000001016.b.j ENSGT00530000063687.b.b.a ENSGT00660000097455 ENSGT00940000160255.j ENSGT00940000175110 ENSGT00940000161421.q ENSGT00940000157794.m ENSGT00940000157161.a.b.f.a Salmo ANCESTRAL SPECIES 39 ENSGT00940000157869.f ENSGT00940000155306.a.o.b ENSGT01090000260040.b.a.b.y.a.d ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c ENSGT00940000157898.i ENSGT00940000155820.b.d ENSGT00940000153629.a.a.a.c ENSGT00390000016228.b.b ENSGT00730000111360.a.d ENSGT00390000007159.c ENSGT00940000161798.ab #22 ENSGT00390000016951.f ENSGT00940000155189.pb.b.a ENSGT01020000230394.e.b.a.j.a ENSGT01030000234549.a.a.a.a.a.b.b.b.f ENSGT00390000001016.b.j ENSGT00530000063687.b.b.a ENSGT00940000160255.j ENSGT00940000161421.q ENSGT00940000157794.m ENSGT00940000157161.a.b.f.a River trout MODERN SPECIES 20 YWHAB (ENSSTUG00000029462) or90j1 (ENSSTUG00000029476) rbm39b (ENSSTUG00000029482) ENSSTUG00000029665 ENSSTUG00000029681 eif2d (ENSSTUG00000030030) mapkapk2b (ENSSTUG00000032003) ENSSTUG00000032365 ren (ENSSTUG00000032390) MAGI1 (ENSSTUG00000032508) ENSSTUG00000032611 prickle2a (ENSSTUG00000032625) ENSSTUG00000032629 ENSSTUG00000032638 RBSN (ENSSTUG00000032654) ENSSTUG00000033134 #22 ENSSTUG00000033145 trh (ENSSTUG00000033159) TMCC1 (ENSSTUG00000033166) PLXND1 (ENSSTUG00000033209) exorh (ENSSTUG00000033486) ENSSTUG00000033508 CRELD1 (ENSSTUG00000033532) ENSSTUG00000033640 BRPF1 (ENSSTUG00000033770) ENSSTUG00000033862 knstrn (ENSSTUG00000034099) Oncorhynchus ANCESTRAL SPECIES 93 ENSGT00940000157238.b.f ENSGT01090000260040.b.a.b.y.a.d ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c ENSGT00940000157898.i ENSGT00940000155820.b.d ENSGT00940000153629.a.a.a.c ENSGT00390000016228.b.b ENSGT01010000229500 ENSGT00730000111360.a.d ENSGT00390000007159.c ENSGT00940000161798.ab #22 ENSGT00390000016951.f ENSGT00940000155189.pb.b.a ENSGT01020000230394.e.b.a.j.a ENSGT01030000234549.a.a.a.a.a.b.b.b.f ENSGT00390000001016.b.j ENSGT00530000063687.b.b.a ENSGT00660000097455 ENSGT00940000160255.j ENSGT00940000175110 ENSGT00940000161421.q ENSGT00940000157794.m ENSGT00940000157161.a.b.f.a Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00390000012445.a.b ENSGT01090000260040.b.a.b.y.a.d ENSGT00940000154468.tb.b.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a.c ENSGT00550000074865.i ENSGT00940000157261.k.b.d ENSGT00390000015805.b.c ENSGT00940000157898.i ENSGT00940000155820.b.d ENSGT00940000153629.a.a.a.c ENSGT00390000016228.b.b ENSGT01010000229500 ENSGT00730000111360.a.d ENSGT00390000007159.c ENSGT00940000161798.ab #22 ENSGT00390000016951.f ENSGT00940000155189.pb.b.a ENSGT01020000230394.e.b.a.j.a ENSGT01030000234549.a.a.a.a.a.b.b.b.f ENSGT00530000063687.b.b.a ENSGT00660000097455 ENSGT00940000160255.j ENSGT00940000175110 ENSGT00940000161421.q ENSGT00940000157794.m ENSGT00940000160145.b ENSGT00940000153385.b.b ENSGT00950000182843.a.b ENSGT00440000039084.a.a ENSGT00940000164282.a.b Coho salmon MODERN SPECIES 8 rbm39b (ENSOKIG00005032574) rh50 (ENSOKIG00005032704) ENSOKIG00005032869 ENSOKIG00005032926 eif2d (ENSOKIG00005033500) mapkapk2b (ENSOKIG00005034502) ENSOKIG00005034759 REN (ENSOKIG00005034802) MAGI1 (ENSOKIG00005034935) PRICKLE2 (ENSOKIG00005035312) ENSOKIG00005035353 ENSOKIG00005035406 ENSOKIG00005035457 ENSOKIG00005035464 RBSN (ENSOKIG00005035505) ENSOKIG00005036324 #22 trh (ENSOKIG00005036568) TMCC1 (ENSOKIG00005036589) PLXND1 (ENSOKIG00005036680) exorh (ENSOKIG00005037616) ENSOKIG00005037650 ENSOKIG00005037687 ENSOKIG00005037696 CRELD1 (ENSOKIG00005037740) ENSOKIG00005037955 BRPF1 (ENSOKIG00005037995) ENSOKIG00005038149 ENSOKIG00005038167 ENSOKIG00005038199 ENSOKIG00005038207 ENSOKIG00005038224 Chinook salmon MODERN SPECIES 7 YWHAB (ENSOTSG00005041470) or90j1 (ENSOTSG00005041472) rbm39b (ENSOTSG00005004633) rh50 (ENSOTSG00005004642) ENSOTSG00005004654 eif2d (ENSOTSG00005005726) mapkapk2b (ENSOTSG00005006808) ENSOTSG00005006823 ENSOTSG00005006824 ren (ENSOTSG00005006825) MAGI1 (ENSOTSG00005006837) prickle2a (ENSOTSG00005006860) ENSOTSG00005006862 ENSOTSG00005006865 RBSN (ENSOTSG00005006868) ENSOTSG00005006962 #22 trh (ENSOTSG00005006965) TMCC1 (ENSOTSG00005006966) PLXND1 (ENSOTSG00005006970) RHO (ENSOTSG00005007029) ENSOTSG00005007031 ENSOTSG00005007032 CRELD1 (ENSOTSG00005007034) ENSOTSG00005007043 ENSOTSG00005007047 BRPF1 (ENSOTSG00005007054) ENSOTSG00005007126 ENSOTSG00005007148 ENSOTSG00005007150 snap29 (ENSOTSG00005007169) ENSOTSG00005007171 Rainbow trout MODERN SPECIES 30 ENSOMYG00000032798 ENSOMYG00000048233 ENSOMYG00000032832 ENSOMYG00000033000 ENSOMYG00000072577 ENSOMYG00000054285 ENSOMYG00000069855 ENSOMYG00000033059 ENSOMYG00000051482 ENSOMYG00000033091 ENSOMYG00000058926 ENSOMYG00000033123 ENSOMYG00000065103 ENSOMYG00000033198 ENSOMYG00000072323 ENSOMYG00000049575 #22 trh (ENSOMYG00000033292) ENSOMYG00000067067 TMCC1 (ENSOMYG00000033319) PLXND1 (ENSOMYG00000033458) ENSOMYG00000033713 exorh (ENSOMYG00000033723) ENSOMYG00000077025 ENSOMYG00000033732 ENSOMYG00000033741 ENSOMYG00000033751 ENSOMYG00000033773 ENSOMYG00000033788 ENSOMYG00000033861 ENSOMYG00000052684 ENSOMYG00000012769 Northern pike MODERN SPECIES 11 ENSELUG00000018395 ENSELUG00000018450 CRELD1 (ENSELUG00000000786) ENSELUG00000018473 ENSELUG00000018483 IFT122 (ENSELUG00000018672) exorh (ENSELUG00000022948) PLXND1 (ENSELUG00000023407) TMCC1 (ENSELUG00000023499) ENSELUG00000031756 trh (ENSELUG00000023514) RBSN (ENSELUG00000023595) mrps25 (ENSELUG00000023537) ENSELUG00000031650 nr2c2 (ENSELUG00000023672) B3GALT4 (ENSELUG00000023696) #22 wdr46 (ENSELUG00000023712) #23 sult1st1 (ENSELUG00000023977) ENSELUG00000024008 ogg1 (ENSELUG00000024024) qars1 (ENSELUG00000024142) QRICH1 (ENSELUG00000024155) ENSELUG00000024192 prickle2a (ENSELUG00000024293) rho (ENSELUG00000024311) MAGI1 (ENSELUG00000024590) ren (ENSELUG00000024611) ENSELUG00000001787 ENSELUG00000024616 FMOD (ENSELUG00000001788) ENSELUG00000001789 Otomorpha ANCESTRAL SPECIES 106 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00730000111286 ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00960000189798 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.a.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00940000155241.c ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT01030000234549.a.a.a.a.a.b.b.a.d ENSGT00940000155820.b ENSGT00940000157898 ENSGT00390000015805.b ENSGT00940000154468.tb.b.b ENSGT00950000182844.a.a.b ENSGT00940000165387.a Otophysi ANCESTRAL SPECIES 220 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00730000111286 ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT00960000189798 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.a.b ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00930000151037 ENSGT00940000157064.a.a ENSGT00390000015408 Characiphysae ANCESTRAL SPECIES 69 ENSGT01030000235645 ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.a.b.b ENSGT00940000163342.a.a.b.a ENSGT00940000163342.a.a.a ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00930000151037 ENSGT00940000157064.a.a ENSGT00390000015408 ENSGT00940000172767 ENSGT00940000154721 ENSGT00940000153341 ENSGT01030000234571.a.b ENSGT00940000160408 Channel catfish MODERN SPECIES 24 susd3 (ENSIPUG00000023585) ENSIPUG00000023564 ENSIPUG00000023557 brpf1 (ENSIPUG00000023545) ENSIPUG00000023537 ENSIPUG00000023536 Creld1 (ENSIPUG00000023523) ENSIPUG00000023518 ift122 (ENSIPUG00000023491) exorh (ENSIPUG00000022599) plxnd1 (ENSIPUG00000022519) tmcc1 (ENSIPUG00000022503) trh (ENSIPUG00000022493) mrps25 (ENSIPUG00000022462) nr2c2 (ENSIPUG00000022437) ENSIPUG00000022431 #22 wdr46 (ENSIPUG00000022420) #23 st1s3 (ENSIPUG00000022384) ENSIPUG00000022375 ENSIPUG00000022361 ENSIPUG00000022192 ENSIPUG00000022172 prrt3 (ENSIPUG00000022168) Ogg1 (ENSIPUG00000022146) qars1 (ENSIPUG00000022101) angptl7 (ENSIPUG00000022088) mtor (ENSIPUG00000022002) exosc10 (ENSIPUG00000021971) ENSIPUG00000021960 ppih (ENSIPUG00000021904) ybx1 (ENSIPUG00000021584) Characiphysae_b ANCESTRAL SPECIES 68 ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.a.b.a.a ENSGT00940000163342.a.a.b.a.b.a.a ENSGT00940000163342.a.a.a ENSGT00730000111360.a ENSGT00640000091554 ENSGT00550000074972 ENSGT00930000151037 ENSGT00940000157064.a.a ENSGT00390000015408 ENSGT00940000172767 ENSGT00940000154721 ENSGT00940000153341 ENSGT01030000234571.a.b ENSGT00940000160408 Characoidei ANCESTRAL SPECIES 114 ENSGT00940000158892.b.i.b ENSGT00940000157161.a.b ENSGT00940000157794 ENSGT00940000161421 ENSGT00940000168503.B ENSGT00940000160255 ENSGT00530000063687.b.b.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.a.b.a.a.a Red-bellied piranha MODERN SPECIES 113 ENSPNAG00000008018 ENSPNAG00000000581 BRPF1 (ENSPNAG00000007904) ENSPNAG00000007881 ENSPNAG00000007864 CRELD1 (ENSPNAG00000007855) ENSPNAG00000000509 IFT122 (ENSPNAG00000007835) exorh (ENSPNAG00000000255) PLXND1 (ENSPNAG00000007399) TMCC1 (ENSPNAG00000007398) trh (ENSPNAG00000007396) RBSN (ENSPNAG00000000161) mrps25 (ENSPNAG00000000160) nr2c2 (ENSPNAG00000007395) B3GALT4 (ENSPNAG00000007394) #22 wdr46 (ENSPNAG00000007393) #23 ENSPNAG00000000159 ENSPNAG00000007392 ENSPNAG00000007391 ENSPNAG00000000158 ENSPNAG00000007390 ENSPNAG00000029502 ENSPNAG00000029498 ENSPNAG00000029467 ogg1 (ENSPNAG00000029459) qars1 (ENSPNAG00000029441) mtor (ENSPNAG00000006286) angptl7 (ENSPNAG00000005287) exosc10 (ENSPNAG00000028864) ppih (ENSPNAG00000006568) Mexicana tetra MODERN SPECIES 21 ENSAMXG00000030759 ENSAMXG00000039873 ENSAMXG00000037200 LRRTM4 (ENSAMXG00000019110) ENSAMXG00000037733 CRELD1 (ENSAMXG00000036937) ENSAMXG00000017271 IFT122 (ENSAMXG00000017213) exorh (ENSAMXG00000017182) PLXND1 (ENSAMXG00000017099) TMCC1 (ENSAMXG00000034799) trh (ENSAMXG00000029674) RBSN (ENSAMXG00000019879) mrps25 (ENSAMXG00000019894) nr2c2 (ENSAMXG00000019916) B3GALT4 (ENSAMXG00000024986) #22 wdr46 (ENSAMXG00000019928) #23 ENSAMXG00000014616 ENSAMXG00000003670 BRPF1 (ENSAMXG00000003661) WNK2 (ENSAMXG00000003641) ENSAMXG00000003632 NINJ1 (ENSAMXG00000032325) ENSAMXG00000041555 ENSAMXG00000043578 FGD3 (ENSAMXG00000015438) BICD2 (ENSAMXG00000015418) ENSAMXG00000026348 ENSAMXG00000037634 ENSAMXG00000031961 ENSAMXG00000043825 Electric eel MODERN SPECIES 382 IFT122 (ENSEEEG00000000912) exorh (ENSEEEG00000000876) PLXND1 (ENSEEEG00000000830) TMCC1 (ENSEEEG00000000801) RBSN (ENSEEEG00000000780) mrps25 (ENSEEEG00000000773) nr2c2 (ENSEEEG00000000716) ENSEEEG00000000697 #22 wdr46 (ENSEEEG00000000550) #23 ENSEEEG00000000522 ENSEEEG00000000507 ENSEEEG00000000489 ENSEEEG00000000457 ENSEEEG00000000443 ogg1 (ENSEEEG00000000432) qars1 (ENSEEEG00000000275) angptl7 (ENSEEEG00000021451) mtor (ENSEEEG00000019515) exosc10 (ENSEEEG00000019443) ENSEEEG00000019442 ppih (ENSEEEG00000019439) ybx1 (ENSEEEG00000019438) arhgef16 (ENSEEEG00000019436) Cyprinoidei ANCESTRAL SPECIES 158 ENSGT00940000158894 ENSGT00940000158933 ENSGT00390000001763 ENSGT01030000235284 ENSGT00530000063260 ENSGT00920000150085 ENSGT00940000154839.A ENSGT00940000158818 ENSGT00940000154471.a.b.a.a.b.b ENSGT01000000214413.b.a.b.b.a ENSGT00900000141054 ENSGT00940000160122 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00390000013792 Cyprininae ANCESTRAL SPECIES 419 ENSGT00390000001763 ENSGT01030000235284 ENSGT00530000063260.e ENSGT00940000154839.A.d ENSGT00530000063260.f ENSGT00940000154839.A.c ENSGT00940000158818 ENSGT00940000154471.a.b.a.a.b.b ENSGT01000000214413.b.a.b.b.a ENSGT00940000160122.a ENSGT00940000160122.b ENSGT00940000163342.a.a.b.c.a.b ENSGT00390000007159.a ENSGT00640000091558.a.b ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075.b #23 Cyprininae_a ANCESTRAL SPECIES 371 ENSGT00940000163875.a.a.a.b ENSGT00940000158933.h ENSGT01090000262132 ENSGT00390000001763 ENSGT01030000235284 ENSGT00530000063260.e ENSGT00940000154839.A.d ENSGT00940000158818.q ENSGT00940000154471.a.b.a.a.b.b.f ENSGT01000000214413.b.a.b.b.a ENSGT00940000160122.b ENSGT00940000163342.a.a.b.c.a.b ENSGT00390000007159.a.b ENSGT00640000091558.a.b ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075.b #23 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 17 ENSCCRG00000033619 ENSCCRG00000053714 ENSCCRG00000073451 ENSCCRG00000056742 ENSCCRG00000061328 ENSCCRG00000065532 ENSCCRG00000046674 ENSCCRG00000064723 ENSCCRG00000017100 gnb1a (ENSCCRG00000053128) ENSCCRG00000038378 ENSCCRG00000030229 ENSCCRG00000026154 mrps25 (ENSCCRG00000061150) nr2c2 (ENSCCRG00000047474) ENSCCRG00000070323 #22 wdr46 (ENSCCRG00000007638) #23 ENSCCRG00000053571 ENSCCRG00000080665 ENSCCRG00000053157 angptl7 (ENSCCRG00000074090) mtor (ENSCCRG00000034992) si:dkey-75a21.2 (ENSCCRG00000070106) qars1 (ENSCCRG00000020784) ENSCCRG00000020772 ENSCCRG00000055544 tas1r2.1 (ENSCCRG00000065318) tas1r2.2 (ENSCCRG00000055062) her3 (ENSCCRG00000044994) GPR153 (ENSCCRG00000059389) ENSCCRG00000076568 Common carp reference MODERN SPECIES 23 ENSCCRG00000080889 parapinopsina (ENSCCRG00000029119) selenok (ENSCCRG00000016099) actr8 (ENSCCRG00000016095) ENSCCRG00000075412 CHDH (ENSCCRG00000064884) CACNA1D (ENSCCRG00000035647) DCP1A (ENSCCRG00000038283) ENSCCRG00000052275 gnb1a (ENSCCRG00000052254) ENSCCRG00000066513 ENSCCRG00000073256 ENSCCRG00000021261 mrps25 (ENSCCRG00000061250) nr2c2 (ENSCCRG00000043684) ENSCCRG00000065409 #22 wdr46 (ENSCCRG00000043753) #23 ENSCCRG00000059544 ENSCCRG00000069263 ENSCCRG00000059163 ENSCCRG00000063940 qars1 (ENSCCRG00000082161) ENSCCRG00000061211 ENSCCRG00000020752 tas1r2.2 (ENSCCRG00000038293) her3 (ENSCCRG00000038290) GPR153 (ENSCCRG00000038288) acot7 (ENSCCRG00000000265) hes2.2 (ENSCCRG00000000261) hes2.1 (ENSCCRG00000070850) hes2.1 (ENSCCRG00000000276) Golden-line barbel MODERN SPECIES 374 ENSSGRG00000022529 LRTM1 (ENSSGRG00000022530) ENSSGRG00000022531 actr8 (ENSSGRG00000022532) ENSSGRG00000022535 CHDH (ENSSGRG00000022537) CACNA1D (ENSSGRG00000022576) dcp1a (ENSSGRG00000022758) ENSSGRG00000022759 BICD2 (ENSSGRG00000022762) gnb1a (ENSSGRG00000022970) GABRD (ENSSGRG00000023342) RBSN (ENSSGRG00000023441) nr2c2 (ENSSGRG00000023457) ENSSGRG00000023534 #22 wdr46 (ENSSGRG00000023536) #23 NADK (ENSSGRG00000023539) Goldfish MODERN SPECIES 48 ENSCARG00000024247 ENSCARG00000024257 ENSCARG00000024263 ENSCARG00000024278 ENSCARG00000024371 ENSCARG00000024378 ENSCARG00000024388 ENSCARG00000024523 dcp1a (ENSCARG00000027232) BICD2 (ENSCARG00000027285) gnb1a (ENSCARG00000028149) GABRD (ENSCARG00000028188) ENSCARG00000028496 mrps25 (ENSCARG00000028498) RBSN (ENSCARG00000028516) ENSCARG00000028571 #22 wdr46 (ENSCARG00000028584) #23 nadka (ENSCARG00000028705) ENSCARG00000031494 BSN (ENSCARG00000031499) DCAF1 (ENSCARG00000031653) ubiad1 (ENSCARG00000034895) MMP23B (ENSCARG00000034915) cdk11b (ENSCARG00000034998) SLC35E2B (ENSCARG00000035227) ENSCARG00000035251 ENSCARG00000035252 ENSCARG00000035255 FGD3 (ENSCARG00000035264) ENSCARG00000035297 ENSCARG00000035305 Zebrafish MODERN SPECIES 23 selenok (ENSDARG00000100823) actr8 (ENSDARG00000103610) CHDH (ENSDARG00000100304) ENSDARG00000101589 ENSDARG00000115603 ENSDARG00000110642 dcp1a (ENSDARG00000100136) BICD2 (ENSDARG00000098215) gnb1a (ENSDARG00000090454) ENSDARG00000075917 GABRD (ENSDARG00000059763) sult1st4 (ENSDARG00000003181) RBSN (ENSDARG00000078215) mrps25 (ENSDARG00000041306) nr2c2 (ENSDARG00000042477) ENSDARG00000076218 #22 wdr46 (ENSDARG00000095879) #23 nadka (ENSDARG00000098313) ENSDARG00000006577 ENSDARG00000096224 nr6a1a (ENSDARG00000101508) nr5a1a (ENSDARG00000103176) ADGRD2 (ENSDARG00000103067) fgf17 (ENSDARG00000102778) tubb2b (ENSDARG00000098591) bcl2l16 (ENSDARG00000114237) ENSDARG00000103676 ccn1l2 (ENSDARG00000099985) ENSDARG00000099294 stambpb (ENSDARG00000086906) ENSDARG00000102599 Clupeiformes ANCESTRAL SPECIES 154 ENSGT00940000155769.`b.a ENSGT00390000005874.i ENSGT00940000155514.d ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189.pb.b ENSGT00390000016951 ENSGT00940000156963.a.a ENSGT00390000006813 ENSGT00940000164642 ENSGT00940000163342.a.a.a ENSGT00730000111360.a ENSGT00640000091554 ENSGT00940000158393 ENSGT00940000161798 #22 ENSGT00390000007075 #23 ENSGT00940000163342.a.a.b.e ENSGT00940000163873.c.a ENSGT00940000155615.i.b ENSGT00940000154583.f ENSGT00390000017131 ENSGT00950000182846.a.a.b.b ENSGT00940000161090.B.c.b.b.b ENSGT01100000263573.b.b ENSGT00390000003114.e.a.a ENSGT00940000158414 ENSGT00940000159780 ENSGT00390000010463.a.a.a.b ENSGT00940000155224.c.b ENSGT00940000154663.a.a Denticle herring MODERN SPECIES 17 GNAS (ENSDCDG00000012458) ENSDCDG00000012506 VAPB (ENSDCDG00000012511) DCAF1 (ENSDCDG00000012534) IFT122 (ENSDCDG00000013175) RHO (ENSDCDG00000016639) PLXND1 (ENSDCDG00000016646) TMCC1 (ENSDCDG00000016677) ENSDCDG00000016678 ENSDCDG00000016690 cs (ENSDCDG00000018730) ENSDCDG00000020100 ENSDCDG00000020110 ogg1 (ENSDCDG00000020113) nr2c2 (ENSDCDG00000020122) B3GALT4 (ENSDCDG00000020152) #22 ENSDCDG00000020157 ENSDCDG00000020167 ENSDCDG00000020169 ENSDCDG00000020171 ENSDCDG00000020174 ENSDCDG00000020179 ssuh2rs1 (ENSDCDG00000020185) grip2a (ENSDCDG00000020265) ENSDCDG00000022389 ENSDCDG00000022393 mvp (ENSDCDG00000022409) tlcd3ba (ENSDCDG00000022809) nlk1 (ENSDCDG00000022811) MAZ (ENSDCDG00000022912) cdipt (ENSDCDG00000022913) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 23 ENSCHAG00000026539 kif2a (ENSCHAG00000026560) dimt1l (ENSCHAG00000026650) cenph (ENSCHAG00000026675) mrps36 (ENSCHAG00000026678) mier3b (ENSCHAG00000026693) plk2b (ENSCHAG00000026726) si:dkey-190g11.3 (ENSCHAG00000026738) rab3c (ENSCHAG00000026746) PDE4D (ENSCHAG00000026756) elovl7a (ENSCHAG00000026800) zcchc8 (ENSCHAG00000026801) DAB2 (ENSCHAG00000026804) TMEM8B (ENSCHAG00000026814) ENSCHAG00000026822 ENSCHAG00000026831 #22 tars1 (ENSCHAG00000026904) gas1a (ENSCHAG00000027396) dapk1 (ENSCHAG00000027445) ctsla (ENSCHAG00000027488) fbp2 (ENSCHAG00000000965) ENSCHAG00000001123 dmrt1 (ENSCHAG00000001231) dmrt3a (ENSCHAG00000001256) dmrt2a (ENSCHAG00000001301) smarca2 (ENSCHAG00000001539) adamts3 (ENSCHAG00000003933) NPFFR2 (ENSCHAG00000009148) gc (ENSCHAG00000009172) slc4a4a (ENSCHAG00000009209) mob1ba (ENSCHAG00000010808) Atlantic herring MODERN SPECIES GNAS (ENSCHAG00000026666) VAPB (ENSCHAG00000026656) DCAF1 (ENSCHAG00000026637) DOCK3 (ENSCHAG00000025595) IFT122 (ENSCHAG00000024796) exorh (ENSCHAG00000024744) PLXND1 (ENSCHAG00000024489) TMCC1 (ENSCHAG00000024474) trh (ENSCHAG00000024472) ENSCHAG00000024394 cs (ENSCHAG00000024358) ENSCHAG00000024341 ENSCHAG00000024336 ogg1 (ENSCHAG00000024331) nr2c2 (ENSCHAG00000024228) ENSCHAG00000024212 #22 wdr46 (ENSCHAG00000024207) #23 sult1st3 (ENSCHAG00000024205) ssuh2rs1 (ENSCHAG00000024187) grip2a (ENSCHAG00000023254) slc6a6a (ENSCHAG00000022868) ABTB1 (ENSCHAG00000022805) dnase1l4.1 (ENSCHAG00000022692) ENSCHAG00000022674 ENSCHAG00000022665 gpd1a (ENSCHAG00000022645) asic1a (ENSCHAG00000022515) spryd4 (ENSCHAG00000022481) GLS2 (ENSCHAG00000020304) col2a1a (ENSCHAG00000017343) chmp4bb (ENSCHAG00000017253) Cyclostomata ANCESTRAL SPECIES ENSGT00940000161798 #22 Lamprey MODERN SPECIES 2907 ENSPMAG00000003825 #22 ENSPMAG00000003823 Hagfish MODERN SPECIES 812 ENSEBUG00000008877 TLR7 (ENSEBUG00000002548) ENSEBUG00000013185 ENSEBUG00000010172 ENSEBUG00000009036 ENSEBUG00000007755 ENSEBUG00000014068 ENSEBUG00000008214 #22 ENSEBUG00000014745 ENSEBUG00000015219 ENSEBUG00000007574 ENSEBUG00000013162 ENSEBUG00000007554 ENSEBUG00000013799 ENSEBUG00000014414 ENSEBUG00000002680 cisd1 (ENSEBUG00000002657) pcna (ENSEBUG00000001137) ENSEBUG00000000370 ENSEBUG00000016163 ENSEBUG00000000890 ENSEBUG00000012399 ENSEBUG00000016577