Euteleostomi	ANCESTRAL SPECIES	16	ENSGT00940000160727	ENSGT00390000018775	ENSGT00940000163632	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00660000096975	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000167105	ENSGT00940000163898	ENSGT00940000158251
Sarcopterygii	ANCESTRAL SPECIES	8	ENSGT00940000166459.A	ENSGT00390000002417	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00660000096975	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00940000166459.A	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00660000096975	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000167105	ENSGT00940000163725	ENSGT00940000163898
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Theria	ANCESTRAL SPECIES	2	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Primates	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00390000017839.o.b.b.b.f	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000017839.o.b.b.b.f	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00940000153524.b.a.a.k.a	ENSGT00950000182839.A.c
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000153362.a.lb	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00910000147454	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00940000153524.b.a.a.k.a	ENSGT00950000182839.A.c
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00390000002417	ENSGT00940000156622	ENSGT01050000244986.b.b.d.a.a.b.a	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT01050000245239.a.a #12	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.a.b #13	ENSGT00940000158014 #14	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.b.c.b #20	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000153052.c.b.a.a.a.a.b.b.b #27	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Rhesus	MODERN SPECIES	2	ZDHHC17 (ENSMMUG00000018254) #7	CSRP2 (ENSMMUG00000018257) #8	ENSMMUG00000052719 #9	E2F7 (ENSMMUG00000022846) #10	ENSMMUG00000059985 #11	ENSMMUG00000055171 #12	ENSMMUG00000060140 #13	NAV3 (ENSMMUG00000021329) #14	ENSMMUG00000058640 #15	ENSMMUG00000051304 #16	ENSMMUG00000060137 #17	SYT1 (ENSMMUG00000005530) #18	PAWR (ENSMMUG00000015179) #19	ENSMMUG00000053591 #20	PPP1R12A (ENSMMUG00000019214) #21	OTOGL (ENSMMUG00000000121) #22	PTPRQ (ENSMMUG00000037711) #23	MYF6 (ENSMMUG00000011667) #24	MYF5 (ENSMMUG00000011669) #25	LIN7A (ENSMMUG00000011671) #26	ENSMMUG00000017463 #27	ACSS3 (ENSMMUG00000013800) #28	ENSMMUG00000046323 #29	PPFIA2 (ENSMMUG00000013804) #30	ENSMMUG00000050266 #31	CCDC59 (ENSMMUG00000063005) #32	METTL25 (ENSMMUG00000002514) #33	ENSMMUG00000059068 #34	TMTC2 (ENSMMUG00000011305) #35	ENSMMUG00000043159 #36	ENSMMUG00000058294 #37
Crab-eating macaque	MODERN SPECIES	2	CSRP2 (ENSMFAG00000033853) #8	E2F7 (ENSMFAG00000000355) #10	ENSMFAG00000065572 #12	ENSMFAG00000060207	ENSMFAG00000059233 #13	NAV3 (ENSMFAG00000044289) #14	ENSMFAG00000034925	ENSMFAG00000034379	ENSMFAG00000000157 ##17	SYT1 (ENSMFAG00000003495) #18	ENSMFAG00000050054	PAWR (ENSMFAG00000062333) #19	ENSMFAG00000063729 #20	ENSMFAG00000049694	PPP1R12A (ENSMFAG00000034239) #21	OTOGL (ENSMFAG00000031786) #22	PTPRQ (ENSMFAG00000044210) #23	ENSMFAG00000052094	ENSMFAG00000058049	MYF6 (ENSMFAG00000033881) #24	MYF5 (ENSMFAG00000042044) #25	LIN7A (ENSMFAG00000040160) #26	ENSMFAG00000031214 #27	ACSS3 (ENSMFAG00000040344) #28	PPFIA2 (ENSMFAG00000031204) #30	ENSMFAG00000049838	CCDC59 (ENSMFAG00000034303) #32	METTL25 (ENSMFAG00000036420) #33	ENSMFAG00000051090	ENSMFAG00000052001	TMTC2 (ENSMFAG00000038030) #35
Pig-tailed macaque	MODERN SPECIES	517	ENSMNEG00000035026	ZDHHC17 (ENSMNEG00000028456) #7	CSRP2 (ENSMNEG00000030922) #8	E2F7 (ENSMNEG00000025875) #10	NAV3 (ENSMNEG00000043424) #14	ENSMNEG00000000985	ENSMNEG00000009689	ENSMNEG00000026858	ENSMNEG00000028899 ##17	ENSMNEG00000037055	ENSMNEG00000038165	ENSMNEG00000031657	SYT1 (ENSMNEG00000030551) #18	PAWR (ENSMNEG00000004020) #19	PPP1R12A (ENSMNEG00000033679) #21	OTOGL (ENSMNEG00000034772) #22	PTPRQ (ENSMNEG00000045562) #23	MYF6 (ENSMNEG00000019739) #24	MYF5 (ENSMNEG00000039510) #25	LIN7A (ENSMNEG00000040769) #26	ACSS3 (ENSMNEG00000030423) #28	ENSMNEG00000021297	PPFIA2 (ENSMNEG00000041825) #30	CCDC59 (ENSMNEG00000037462) #32	METTL25 (ENSMNEG00000042500) #33	TMTC2 (ENSMNEG00000028808) #35	ENSMNEG00000032829	SLC6A15 (ENSMNEG00000005563)	TSPAN19 (ENSMNEG00000036225)	LRRIQ1 (ENSMNEG00000037379)	ALX1 (ENSMNEG00000034993)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000158854.ab.a	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000014818.g.b.a.a.a.b.b	ENSGT00940000153294.m.b.s.f	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898
Olive baboon	MODERN SPECIES	19	NAP1L1 (ENSPANG00000009165)	BBS10 (ENSPANG00000026355)	OSBPL8 (ENSPANG00000009379)	ENSPANG00000028903	ZDHHC17 (ENSPANG00000004050) #7	CSRP2 (ENSPANG00000023047) #8	E2F7 (ENSPANG00000004929) #10	NAV3 (ENSPANG00000007911) #14	ENSPANG00000043139	ENSPANG00000015985	ENSPANG00000040020 ##9	SYT1 (ENSPANG00000009048) #18	PAWR (ENSPANG00000009557) #19	PPP1R12A (ENSPANG00000026354) #21	ENSPANG00000047805	OTOGL (ENSPANG00000012907) #22	PTPRQ (ENSPANG00000014456) #23	ENSPANG00000005319	MYF6 (ENSPANG00000044306) #24	MYF5 (ENSPANG00000020394) #25	LIN7A (ENSPANG00000005931) #26	ACSS3 (ENSPANG00000019084) #28	PPFIA2 (ENSPANG00000019704) #30	ENSPANG00000035488	ENSPANG00000042647 ##20	ENSPANG00000049322	CCDC59 (ENSPANG00000023011) #32	METTL25 (ENSPANG00000033969) #33	ENSPANG00000032275	TMTC2 (ENSPANG00000008622) #35	ENSPANG00000049628
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00390000009168.hb	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000163914.c.a	ENSGT00390000003133.i.a ##17	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000014818.g.b.a.a.a.b.a	ENSGT00940000153294.m.b.s.f	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898
Sooty mangabey	MODERN SPECIES	582	BBS10 (ENSCATG00000042101)	OSBPL8 (ENSCATG00000036635)	ENSCATG00000005498	ENSCATG00000039522	ENSCATG00000044128	ZDHHC17 (ENSCATG00000040479) #7	CSRP2 (ENSCATG00000040566) #8	E2F7 (ENSCATG00000035481) #10	NAV3 (ENSCATG00000032040) #14	ENSCATG00000017337	ENSCATG00000040529 ##17	ENSCATG00000044466	SYT1 (ENSCATG00000033541) #18	PAWR (ENSCATG00000034935) #19	PPP1R12A (ENSCATG00000038278) #21	OTOGL (ENSCATG00000038125) #22	PTPRQ (ENSCATG00000039610) #23	MYF6 (ENSCATG00000029151) #24	MYF5 (ENSCATG00000042162) #25	LIN7A (ENSCATG00000029939) #26	ACSS3 (ENSCATG00000030914) #28	PPFIA2 (ENSCATG00000040747) #30	ENSCATG00000038856	ENSCATG00000031323	ENSCATG00000034351	CCDC59 (ENSCATG00000044760) #32	METTL25 (ENSCATG00000044852) #33	TMTC2 (ENSCATG00000040764) #35	ENSCATG00000022828	SLC6A15 (ENSCATG00000041025)	TSPAN19 (ENSCATG00000034141)
Drill	MODERN SPECIES	1141																OTOGL (ENSMLEG00000040646) #22	PTPRQ (ENSMLEG00000039303) #23	MYF6 (ENSMLEG00000034432) #24	MYF5 (ENSMLEG00000038211) #25	LIN7A (ENSMLEG00000020249) #26	ACSS3 (ENSMLEG00000042153) #28	ENSMLEG00000000975	PPFIA2 (ENSMLEG00000042213) #30
Vervet Monkey	MODERN SPECIES	2	GLIPR1 (ENSCSAG00000004038)	KRR1 (ENSCSAG00000004034)	ENSCSAG00000018909	NAP1L1 (ENSCSAG00000004030)	BBS10 (ENSCSAG00000004028)	OSBPL8 (ENSCSAG00000004024)	ZDHHC17 (ENSCSAG00000004014) #7	CSRP2 (ENSCSAG00000004009) #8	E2F7 (ENSCSAG00000003998) #10	ENSCSAG00000003979 #14	ENSCSAG00000018912	ENSCSAG00000018914	SYT1 (ENSCSAG00000003971) #18	PAWR (ENSCSAG00000003962) #19	PPP1R12A (ENSCSAG00000003956) #21	OTOGL (ENSCSAG00000003939) #22	PTPRQ (ENSCSAG00000003913) #23	MYF6 (ENSCSAG00000003893) #24	MYF5 (ENSCSAG00000003889) #25	LIN7A (ENSCSAG00000003887) #26	ACSS3 (ENSCSAG00000003882) #28	PPFIA2 (ENSCSAG00000003876) #30	ENSCSAG00000003868 #30	CCDC59 (ENSCSAG00000003867) #32	METTL25 (ENSCSAG00000003863) #33	ENSCSAG00000018917	TMTC2 (ENSCSAG00000003860) #35	ENSCSAG00000018919	ENSCSAG00000018921	ENSCSAG00000018923	SLC6A15 (ENSCSAG00000003858)
Rhinopithecus	ANCESTRAL SPECIES	603																ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30
Golden snub-nosed monkey	MODERN SPECIES	2447																OTOGL (ENSRROG00000003053) #22	PTPRQ (ENSRROG00000040104) #23	MYF6 (ENSRROG00000040631) #24	MYF5 (ENSRROG00000040728) #25	LIN7A (ENSRROG00000035008) #26	ACSS3 (ENSRROG00000030884) #28	PPFIA2 (ENSRROG00000012213) #30
Black snub-nosed monkey	MODERN SPECIES	316												SYT1 (ENSRBIG00000027508) #18	PAWR (ENSRBIG00000029572) #19	PPP1R12A (ENSRBIG00000039895) #21	ENSRBIG00000036936	OTOGL (ENSRBIG00000041963) #22
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546.c #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Hominidae	ANCESTRAL SPECIES	4	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00910000147072	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546.c #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546.c #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546.c #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Pan	ANCESTRAL SPECIES	4	ENSGT00940000153362.a	ENSGT00880000138028.b.b.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.a	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000154389.b.e	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155142.i.a.a	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546.c #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Chimpanzee	MODERN SPECIES	3	OSBPL8 (ENSPTRG00000005242)	ENSPTRG00000045883	ENSPTRG00000048649	ZDHHC17 (ENSPTRG00000005243) #7	CSRP2 (ENSPTRG00000005244) #8	ENSPTRG00000051009	E2F7 (ENSPTRG00000005245) #10	NAV3 (ENSPTRG00000005247) #14	ENSPTRG00000046920	ENSPTRG00000044151	ENSPTRG00000050322	SYT1 (ENSPTRG00000024064) #18	PAWR (ENSPTRG00000005250) #19	PPP1R12A (ENSPTRG00000005252) #21	ENSPTRG00000045837	OTOGL (ENSPTRG00000005257) #22	PTPRQ (ENSPTRG00000039205) #23	MYF6 (ENSPTRG00000005260) #24	MYF5 (ENSPTRG00000005261) #25	LIN7A (ENSPTRG00000005262) #26	ACSS3 (ENSPTRG00000005263) #28	PPFIA2 (ENSPTRG00000005265) #30	CCDC59 (ENSPTRG00000005266) #32	METTL25 (ENSPTRG00000005267) #33	TMTC2 (ENSPTRG00000005268) #35	SLC6A15 (ENSPTRG00000005269)	TSPAN19 (ENSPTRG00000040421)	LRRIQ1 (ENSPTRG00000005271)	ALX1 (ENSPTRG00000005272)	RASSF9 (ENSPTRG00000005273)	NTS (ENSPTRG00000005274)
Bonobo	MODERN SPECIES	3	NAP1L1 (ENSPPAG00000043344)	ENSPPAG00000043638	BBS10 (ENSPPAG00000028532)	OSBPL8 (ENSPPAG00000043423)	ENSPPAG00000040481	ZDHHC17 (ENSPPAG00000030097) #7	ENSPPAG00000042089 #8	ENSPPAG00000042681	E2F7 (ENSPPAG00000002532) #10	NAV3 (ENSPPAG00000036134) #14	ENSPPAG00000015674	ENSPPAG00000028521	SYT1 (ENSPPAG00000029261) #18	PAWR (ENSPPAG00000043711) #19	PPP1R12A (ENSPPAG00000030740) #21	OTOGL (ENSPPAG00000014085) #22	PTPRQ (ENSPPAG00000000830) #23	MYF6 (ENSPPAG00000032290) #24	MYF5 (ENSPPAG00000028699) #25	LIN7A (ENSPPAG00000026771) #26	ACSS3 (ENSPPAG00000040977) #28	PPFIA2 (ENSPPAG00000033118) #30	CCDC59 (ENSPPAG00000030113) #32	METTL25 (ENSPPAG00000028130) #33	TMTC2 (ENSPPAG00000043706) #35	SLC6A15 (ENSPPAG00000043054)	TSPAN19 (ENSPPAG00000042222)	LRRIQ1 (ENSPPAG00000029539)	ALX1 (ENSPPAG00000034056)	RASSF9 (ENSPPAG00000019366)	NTS (ENSPPAG00000032540)
Human	MODERN SPECIES	3	GLIPR1L1 (ENSG00000173401)	GLIPR1L2 (ENSG00000180481)	GLIPR1 (ENSG00000139278)	KRR1 (ENSG00000111615)	PHLDA1 (ENSG00000139289)	NAP1L1 (ENSG00000187109)	BBS10 (ENSG00000179941)	OSBPL8 (ENSG00000091039)	ZDHHC17 (ENSG00000186908) #7	CSRP2 (ENSG00000175183) #8	E2F7 (ENSG00000165891) #10	NAV3 (ENSG00000067798) #14	SYT1 (ENSG00000067715) #18	PAWR (ENSG00000177425) #19	PPP1R12A (ENSG00000058272) #21	OTOGL (ENSG00000165899) #22	PTPRQ (ENSG00000139304) #23	MYF6 (ENSG00000111046) #24	MYF5 (ENSG00000111049) #25	LIN7A (ENSG00000111052) #26	ACSS3 (ENSG00000111058) #28	PPFIA2 (ENSG00000139220) #30	CCDC59 (ENSG00000133773) #32	METTL25 (ENSG00000127720) #33	TMTC2 (ENSG00000179104) #35	SLC6A15 (ENSG00000072041)	TSPAN19 (ENSG00000231738)	LRRIQ1 (ENSG00000133640)	ALX1 (ENSG00000180318)	RASSF9 (ENSG00000198774)	NTS (ENSG00000133636)
Gorilla	MODERN SPECIES	3	BBS10 (ENSGGOG00000023091)	OSBPL8 (ENSGGOG00000016140)	ENSGGOG00000023867	ZDHHC17 (ENSGGOG00000023287) #7	ENSGGOG00000039704 #8	ENSGGOG00000041578 #8	ENSGGOG00000038839	E2F7 (ENSGGOG00000012645) #10	NAV3 (ENSGGOG00000006574) #14	ENSGGOG00000002908	SYT1 (ENSGGOG00000024224) #18	ENSGGOG00000022534	PAWR (ENSGGOG00000010093) #19	PPP1R12A (ENSGGOG00000014574) #21	ENSGGOG00000025286	ENSGGOG00000015088 #22	PTPRQ (ENSGGOG00000011494) #23	MYF6 (ENSGGOG00000004369) #24	MYF5 (ENSGGOG00000004366) #25	LIN7A (ENSGGOG00000038053) #26	ACSS3 (ENSGGOG00000010105) #28	PPFIA2 (ENSGGOG00000026460) #30	CCDC59 (ENSGGOG00000025296) #32	METTL25 (ENSGGOG00000023239) #33	TMTC2 (ENSGGOG00000028180) #35	ENSGGOG00000025311	SLC6A15 (ENSGGOG00000010440)	TSPAN19 (ENSGGOG00000022316)	LRRIQ1 (ENSGGOG00000010081)	ALX1 (ENSGGOG00000000168)	RASSF9 (ENSGGOG00000028426)
Orangutan	MODERN SPECIES	3	ENSPPYG00000038710	NAP1L1 (ENSPPYG00000004786)	ENSPPYG00000032561	BBS10 (ENSPPYG00000004787)	ENSPPYG00000037353	OSBPL8 (ENSPPYG00000004788)	ZDHHC17 (ENSPPYG00000004789) #7	ENSPPYG00000031243 #8	E2F7 (ENSPPYG00000004791) #10	NAV3 (ENSPPYG00000004792) #14	ENSPPYG00000004793	SYT1 (ENSPPYG00000004794) #18	PAWR (ENSPPYG00000004795) #19	ENSPPYG00000025853	PPP1R12A (ENSPPYG00000004796) #21	OTOGL (ENSPPYG00000004797) #22	PTPRQ (ENSPPYG00000041069) #23	MYF6 (ENSPPYG00000004799) #24	MYF5 (ENSPPYG00000004800) #25	LIN7A (ENSPPYG00000039262) #26	ACSS3 (ENSPPYG00000004802) #28	PPFIA2 (ENSPPYG00000004803) #30	CCDC59 (ENSPPYG00000004804) #32	METTL25 (ENSPPYG00000004805) #33	TMTC2 (ENSPPYG00000004806) #35	SLC6A15 (ENSPPYG00000004807)	TSPAN19 (ENSPPYG00000038266)	LRRIQ1 (ENSPPYG00000004808)	RASSF9 (ENSPPYG00000033145)	NTS (ENSPPYG00000004810)	MGAT4C (ENSPPYG00000004811)
Gibbon	MODERN SPECIES		GLIPR1 (ENSNLEG00000004629)	KRR1 (ENSNLEG00000004647)	ENSNLEG00000004680	NAP1L1 (ENSNLEG00000004682)	ENSNLEG00000031630	BBS10 (ENSNLEG00000004748)	OSBPL8 (ENSNLEG00000004750)	ZDHHC17 (ENSNLEG00000004841) #7	ENSNLEG00000004885 #8	ENSNLEG00000028737	E2F7 (ENSNLEG00000004897) #10	NAV3 (ENSNLEG00000004917) #14	SYT1 (ENSNLEG00000004995) #18	PAWR (ENSNLEG00000005035) #19	PPP1R12A (ENSNLEG00000005041) #21	OTOGL (ENSNLEG00000005115) #22	PTPRQ (ENSNLEG00000005154) #23	MYF6 (ENSNLEG00000032583) #24	MYF5 (ENSNLEG00000005207) #25	LIN7A (ENSNLEG00000032491) #26	ACSS3 (ENSNLEG00000005227) #28	PPFIA2 (ENSNLEG00000005251) #30	CCDC59 (ENSNLEG00000033968) #32	METTL25 (ENSNLEG00000005299) #33	TMTC2 (ENSNLEG00000005311) #35	SLC6A15 (ENSNLEG00000005336)	LRRIQ1 (ENSNLEG00000005358)	ALX1 (ENSNLEG00000005381)	RASSF9 (ENSNLEG00000005386)	NTS (ENSNLEG00000005388)	MGAT4C (ENSNLEG00000005393)
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00440000039564.b	ENSGT00910000147072.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.u.a.a #8	ENSGT00940000154980.u.a.b #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00910000148286	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00390000014620.j	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00910000147072.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.u.a.a #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00390000014620.j	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00910000147072.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.u.a.a #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00550000074807.d	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00390000008708.o.a	ENSGT00940000157277	ENSGT00390000014620.j	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251
Bolivian squirrel monkey	MODERN SPECIES	67	GLIPR1 (ENSSBOG00000033770)	KRR1 (ENSSBOG00000029569)	ENSSBOG00000034714	BBS10 (ENSSBOG00000022169)	OSBPL8 (ENSSBOG00000030671)	ZDHHC17 (ENSSBOG00000036173) #7	ENSSBOG00000014459 #8	E2F7 (ENSSBOG00000028674) #10	NAV3 (ENSSBOG00000036099) #14	ENSSBOG00000036163	ENSSBOG00000025849	SYT1 (ENSSBOG00000033271) #18	PAWR (ENSSBOG00000025731) #19	PPP1R12A (ENSSBOG00000033660) #21	ENSSBOG00000026289	OTOGL (ENSSBOG00000033681) #22	PTPRQ (ENSSBOG00000027538) #23	MYF6 (ENSSBOG00000021822) #24	MYF5 (ENSSBOG00000019536) #25	LIN7A (ENSSBOG00000030034) #26	ENSSBOG00000034028	ENSSBOG00000022040	ACSS3 (ENSSBOG00000018710) #28	PPFIA2 (ENSSBOG00000021244) #30	CCDC59 (ENSSBOG00000029711) #32	METTL25 (ENSSBOG00000025680) #33	ENSSBOG00000025592	TMTC2 (ENSSBOG00000024696) #35	ENSSBOG00000032046	ENSSBOG00000035574	SLC6A15 (ENSSBOG00000036273)
Capuchin	MODERN SPECIES	156													PAWR (ENSCCAG00000026556) #19	PPP1R12A (ENSCCAG00000027422) #21	ENSCCAG00000033086	OTOGL (ENSCCAG00000019837) #22	PTPRQ (ENSCCAG00000033930) #23	MYF6 (ENSCCAG00000032873) #24	MYF5 (ENSCCAG00000029028) #25	LIN7A (ENSCCAG00000033374) #26	ACSS3 (ENSCCAG00000035103) #28	PPFIA2 (ENSCCAG00000029694) #30	CCDC59 (ENSCCAG00000021997) #32	METTL25 (ENSCCAG00000032764) #33	ENSCCAG00000034003	TMTC2 (ENSCCAG00000037661) #35	ENSCCAG00000032890
Marmoset	MODERN SPECIES	21	ENSCJAG00000075772 ##9	PHLDA1 (ENSCJAG00000072700)	NAP1L1 (ENSCJAG00000001115)	ENSCJAG00000078161	BBS10 (ENSCJAG00000001113)	OSBPL8 (ENSCJAG00000001055)	ZDHHC17 (ENSCJAG00000019075) #7	ENSCJAG00000019153 #8	E2F7 (ENSCJAG00000019162) #10	NAV3 (ENSCJAG00000019176) #14	ENSCJAG00000078124	ENSCJAG00000078194	SYT1 (ENSCJAG00000019262) #18	PAWR (ENSCJAG00000019265) #19	PPP1R12A (ENSCJAG00000019271) #21	OTOGL (ENSCJAG00000019323) #22	PTPRQ (ENSCJAG00000019332) #23	MYF6 (ENSCJAG00000081789) #24	MYF5 (ENSCJAG00000019340) #25	LIN7A (ENSCJAG00000019343) #26	ACSS3 (ENSCJAG00000019352) #28	PPFIA2 (ENSCJAG00000019370) #30	CCDC59 (ENSCJAG00000019396) #32	METTL25 (ENSCJAG00000019400) #33	TMTC2 (ENSCJAG00000019420) #35	ENSCJAG00000073753	ENSCJAG00000081141	ENSCJAG00000086215	SLC6A15 (ENSCJAG00000019425)	TSPAN19 (ENSCJAG00000039345)	LRRIQ1 (ENSCJAG00000019445)
Mas night monkey	MODERN SPECIES	833		ZDHHC17 (ENSANAG00000030636) #7	ENSANAG00000023471	ENSANAG00000028981	ENSANAG00000021237 #8	E2F7 (ENSANAG00000036545) #10	ENSANAG00000032226	NAV3 (ENSANAG00000037686) #14	ENSANAG00000023582	ENSANAG00000023157	SYT1 (ENSANAG00000025826) #18	PAWR (ENSANAG00000022396) #19	PPP1R12A (ENSANAG00000034824) #21	ENSANAG00000019658	ENSANAG00000036662	OTOGL (ENSANAG00000024695) #22	PTPRQ (ENSANAG00000035871) #23	MYF6 (ENSANAG00000024892) #24	MYF5 (ENSANAG00000023208) #25	LIN7A (ENSANAG00000032889) #26	ACSS3 (ENSANAG00000034361) #28	PPFIA2 (ENSANAG00000023020) #30	CCDC59 (ENSANAG00000033505) #32	METTL25 (ENSANAG00000035794) #33	TMTC2 (ENSANAG00000036537) #35	ENSANAG00000022029	SLC6A15 (ENSANAG00000025270)	ENSANAG00000032039	TSPAN19 (ENSANAG00000013117)	LRRIQ1 (ENSANAG00000027300)	ALX1 (ENSANAG00000031059)
Tarsier	MODERN SPECIES	4455																OTOGL (ENSTSYG00000036620) #22	ENSTSYG00000026335	PTPRQ (ENSTSYG00000027505) #23	MYF6 (ENSTSYG00000003275) #24	MYF5 (ENSTSYG00000003282) #25	ENSTSYG00000010879 #26
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394.b #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394.b #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Mouse lemur	MODERN SPECIES	29	GLIPR1 (ENSMICG00000015121)	KRR1 (ENSMICG00000015127)	NAP1L1 (ENSMICG00000006036)	BBS10 (ENSMICG00000042947)	OSBPL8 (ENSMICG00000000969)	ENSMICG00000029525	ZDHHC17 (ENSMICG00000033453) #7	CSRP2 (ENSMICG00000047076) #8	ENSMICG00000014368	E2F7 (ENSMICG00000013872) #10	NAV3 (ENSMICG00000003403) #14	SYT1 (ENSMICG00000015517) #18	PAWR (ENSMICG00000031649) #19	ENSMICG00000032513	PPP1R12A (ENSMICG00000032335) #21	OTOGL (ENSMICG00000026871) #22	PTPRQ (ENSMICG00000038737) #23	MYF6 (ENSMICG00000004274) #24	MYF5 (ENSMICG00000036139) #25	LIN7A (ENSMICG00000033894) #26	ACSS3 (ENSMICG00000010809) #28	PPFIA2 (ENSMICG00000010822) #30	CCDC59 (ENSMICG00000041747) #32	METTL25 (ENSMICG00000027175) #33	TMTC2 (ENSMICG00000031682) #35	SLC6A15 (ENSMICG00000026324)	TSPAN19 (ENSMICG00000038361)	LRRIQ1 (ENSMICG00000037929)	ALX1 (ENSMICG00000032710)	RASSF9 (ENSMICG00000042014)	NTS (ENSMICG00000037863)
Lemuriformes_a	ANCESTRAL SPECIES	190													ENSGT00940000155394.b #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Greater bamboo lemur	MODERN SPECIES	95									PANK3 (ENSPSMG00000017197)	ENSPSMG00000017175	CPEB4 (ENSPSMG00000017067)	ENSPSMG00000016953	SYT1 (ENSPSMG00000016943) #18	PAWR (ENSPSMG00000016915) #19	PPP1R12A (ENSPSMG00000016837) #21	OTOGL (ENSPSMG00000016582) #22	PTPRQ (ENSPSMG00000016269) #23	MYF6 (ENSPSMG00000016092) #24	MYF5 (ENSPSMG00000016083) #25	LIN7A (ENSPSMG00000016071) #26	ACSS3 (ENSPSMG00000016037) #28	PPFIA2 (ENSPSMG00000015931) #30	CCDC59 (ENSPSMG00000015532) #32	METTL25 (ENSPSMG00000015523) #33	TMTC2 (ENSPSMG00000015469) #35	SLC6A15 (ENSPSMG00000015347)	TSPAN19 (ENSPSMG00000015246)	LRRIQ1 (ENSPSMG00000015231)
Coquerels sifaka	MODERN SPECIES	654	CXorf58 (ENSPCOG00000011026)	ENSPCOG00000008920	APOO (ENSPCOG00000020962)	SAT1 (ENSPCOG00000022263)	ACOT9 (ENSPCOG00000017631)	PRDX4 (ENSPCOG00000021645)	PTCHD1 (ENSPCOG00000010244)	PHEX (ENSPCOG00000025455)	ENSPCOG00000017400	MBTPS2 (ENSPCOG00000008143)	SMPX (ENSPCOG00000025800)	CNKSR2 (ENSPCOG00000014884)	SYT1 (ENSPCOG00000025512) #18	PAWR (ENSPCOG00000018957) #19	PPP1R12A (ENSPCOG00000018987) #21	OTOGL (ENSPCOG00000027646) #22	PTPRQ (ENSPCOG00000012150) #23	MYF6 (ENSPCOG00000021756) #24	MYF5 (ENSPCOG00000012709) #25
Bushbaby	MODERN SPECIES	122	GLIPR1L2 (ENSOGAG00000010303)	GLIPR1 (ENSOGAG00000010309)	ENSOGAG00000010313	PHLDA1 (ENSOGAG00000010317)	NAP1L1 (ENSOGAG00000010319)	BBS10 (ENSOGAG00000025855)	OSBPL8 (ENSOGAG00000017084)	ZDHHC17 (ENSOGAG00000013994) #7	CSRP2 (ENSOGAG00000013999) #8	E2F7 (ENSOGAG00000010821) #10	ENSOGAG00000030290	NAV3 (ENSOGAG00000010604) #14	SYT1 (ENSOGAG00000009943) #18	PAWR (ENSOGAG00000027944) #19	PPP1R12A (ENSOGAG00000010740) #21	OTOGL (ENSOGAG00000030466) #22	PTPRQ (ENSOGAG00000025362) #23	MYF6 (ENSOGAG00000001038) #24	MYF5 (ENSOGAG00000001039) #25	LIN7A (ENSOGAG00000004616) #26	ACSS3 (ENSOGAG00000014813) #28	PPFIA2 (ENSOGAG00000014823) #30	ENSOGAG00000025088	CCDC59 (ENSOGAG00000004383) #32	METTL25 (ENSOGAG00000004384) #33	TMTC2 (ENSOGAG00000000477) #35	SLC6A15 (ENSOGAG00000014207)	LRRIQ1 (ENSOGAG00000014209)	ALX1 (ENSOGAG00000014211)	RASSF9 (ENSOGAG00000003208)	NTS (ENSOGAG00000003210)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Glires	ANCESTRAL SPECIES	4	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Lagomorpha	ANCESTRAL SPECIES	113	ENSGT00940000162547.f.b	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Rabbit	MODERN SPECIES	15	BBS10 (ENSOCUG00000010522)	OSBPL8 (ENSOCUG00000010527)	ENSOCUG00000032449	ENSOCUG00000028124	ZDHHC17 (ENSOCUG00000010401) #7	ENSOCUG00000027238	ENSOCUG00000008330 #8	E2F7 (ENSOCUG00000004932) #10	ENSOCUG00000025947	NAV3 (ENSOCUG00000004936) #14	ENSOCUG00000005148	SYT1 (ENSOCUG00000014829) #18	PAWR (ENSOCUG00000013722) #19	PPP1R12A (ENSOCUG00000016701) #21	ENSOCUG00000037584	OTOGL (ENSOCUG00000014963) #22	PTPRQ (ENSOCUG00000011455) #23	MYF6 (ENSOCUG00000001457) #24	MYF5 (ENSOCUG00000025477) #25	LIN7A (ENSOCUG00000004203) #26	ACSS3 (ENSOCUG00000015752) #28	PPFIA2 (ENSOCUG00000015770) #30	ENSOCUG00000036764	CCDC59 (ENSOCUG00000017824) #32	METTL25 (ENSOCUG00000017825) #33	TMTC2 (ENSOCUG00000017847) #35	SLC6A15 (ENSOCUG00000014066)	TSPAN19 (ENSOCUG00000037319)	ENSOCUG00000034706	LRRIQ1 (ENSOCUG00000017527)	ALX1 (ENSOCUG00000009125)
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Kangaroo rat	MODERN SPECIES	322	ENSDORG00000027121	Glipr1 (ENSDORG00000004613)	ENSDORG00000004614	ENSDORG00000023399	Phlda1 (ENSDORG00000027757)	Nap1l1 (ENSDORG00000029138)	Bbs10 (ENSDORG00000000668)	Osbpl8 (ENSDORG00000000670)	Zdhhc17 (ENSDORG00000012435) #7	Csrp2 (ENSDORG00000012441) #8	ENSDORG00000026154 #10	Nav3 (ENSDORG00000011080) #14	Syt1 (ENSDORG00000003724) #18	Pawr (ENSDORG00000029489) #19	Ppp1r12a (ENSDORG00000007157) #21	Otogl (ENSDORG00000028677) #22	Ptprq (ENSDORG00000023208) #23	Myf6 (ENSDORG00000015435) #24	Myf5 (ENSDORG00000015437) #25	Lin7a (ENSDORG00000014355) #26	Acss3 (ENSDORG00000007288) #28	Ppfia2 (ENSDORG00000007289) #30	Mettl25 (ENSDORG00000003006) #33	Tmtc2 (ENSDORG00000005875) #35	Slc6a15 (ENSDORG00000000388)	ENSDORG00000008703	ENSDORG00000011012	Alx1 (ENSDORG00000011021)	Rassf9 (ENSDORG00000029782)	Nts (ENSDORG00000016284)	Mgat4c (ENSDORG00000025545)
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Lesser Egyptian jerboa	MODERN SPECIES	42	Phlda1 (ENSJJAG00000023924)	Nap1l1 (ENSJJAG00000023205)	ENSJJAG00000024142	Bbs10 (ENSJJAG00000023405)	Osbpl8 (ENSJJAG00000024252)	ENSJJAG00000011419 #7	ENSJJAG00000014135 #8	ENSJJAG00000005723	E2f7 (ENSJJAG00000007878) #10	ENSJJAG00000010552	Nav3 (ENSJJAG00000012332) #14	ENSJJAG00000022372	Syt1 (ENSJJAG00000023399) #18	Pawr (ENSJJAG00000018666) #19	Ppp1r12a (ENSJJAG00000023796) #21	Otogl (ENSJJAG00000019493) #22	Ptprq (ENSJJAG00000017741) #23	Myf6 (ENSJJAG00000011250) #24	Myf5 (ENSJJAG00000003407) #25	Lin7a (ENSJJAG00000023503) #26	Acss3 (ENSJJAG00000008308) #28	Ppfia2 (ENSJJAG00000006298) #30	ENSJJAG00000003779	Ccdc59 (ENSJJAG00000015263) #32	Mettl25 (ENSJJAG00000023860) #33	Tmtc2 (ENSJJAG00000016641) #35	Slc6a15 (ENSJJAG00000006373)	Alx1 (ENSJJAG00000006817)	ENSJJAG00000002806	Rassf9 (ENSJJAG00000013251)	Nts (ENSJJAG00000014653)
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Upper Galilee mountains blind mole rat	MODERN SPECIES	494			ENSNGAG00000022884	ENSNGAG00000014133	Bbs10 (ENSNGAG00000022298)	Osbpl8 (ENSNGAG00000014231)	Zdhhc17 (ENSNGAG00000009049) #7	ENSNGAG00000023257 #8	E2f7 (ENSNGAG00000023644) #10	ENSNGAG00000024182	Nav3 (ENSNGAG00000024210) #14	Syt1 (ENSNGAG00000020988) #18	Pawr (ENSNGAG00000015922) #19	Ppp1r12a (ENSNGAG00000023300) #21	ENSNGAG00000024231	Otogl (ENSNGAG00000022483) #22	Ptprq (ENSNGAG00000024172) #23	Myf6 (ENSNGAG00000023390) #24	Myf5 (ENSNGAG00000003539) #25	Lin7a (ENSNGAG00000022827) #26	Acss3 (ENSNGAG00000015078) #28	Ppfia2 (ENSNGAG00000022807) #30	ENSNGAG00000012599	Ccdc59 (ENSNGAG00000023637) #32	Mettl25 (ENSNGAG00000016246) #33	Tmtc2 (ENSNGAG00000023652) #35
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000160727	ENSGT00390000018775	ENSGT00940000167051	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Chinese hamster chok1gshd	MODERN SPECIES	83	Phlda1 (ENSCGRG00001012896)	ENSCGRG00001019257	Bbs10 (ENSCGRG00001010466)	Osbpl8 (ENSCGRG00001021286)	Zdhhc17 (ENSCGRG00001007660) #7	Csrp2 (ENSCGRG00001000844) #8	E2f7 (ENSCGRG00001006568) #10	ENSCGRG00001011762	Nav3 (ENSCGRG00001022037) #14	Brcc3dc (ENSCGRG00001009076)	Syt1 (ENSCGRG00001000069) #18	ENSCGRG00001010398	ENSCGRG00001009057	Pawr (ENSCGRG00001011044) #19	Ppp1r12a (ENSCGRG00001017263) #21	Otogl (ENSCGRG00001018530) #22	Ptprq (ENSCGRG00001017128) #23	Myf6 (ENSCGRG00001006341) #24	Myf5 (ENSCGRG00001009370) #25	Lin7a (ENSCGRG00001003313) #26	Acss3 (ENSCGRG00001009906) #28	Ppfia2 (ENSCGRG00001020914) #30	ENSCGRG00001016413 #33	Syn3 (ENSCGRG00001000589)	Timp3 (ENSCGRG00001016875)	Fbxo7 (ENSCGRG00001019488)	Bpifc (ENSCGRG00001023438)	Rtcb (ENSCGRG00001011173)	Ascl4 (ENSCGRG00001008661)	ENSCGRG00001015102	Pwp1 (ENSCGRG00001019668)
Golden Hamster	MODERN SPECIES	628	ENSMAUG00000022161	Glipr1l2 (ENSMAUG00000017252)	Krr1 (ENSMAUG00000021283)	ENSMAUG00000021584	Nap1l1 (ENSMAUG00000016700)	Bbs10 (ENSMAUG00000018240)	Osbpl8 (ENSMAUG00000022092)	Zdhhc17 (ENSMAUG00000021687) #7	Csrp2 (ENSMAUG00000018727) #8	E2f7 (ENSMAUG00000010792) #10	Nav3 (ENSMAUG00000012505) #14	ENSMAUG00000014224	Syt1 (ENSMAUG00000012263) #18	ENSMAUG00000008984	Ppp1r12a (ENSMAUG00000021712) #21	Otogl (ENSMAUG00000009930) #22	Ptprq (ENSMAUG00000014282) #23	Myf6 (ENSMAUG00000019329) #24	Myf5 (ENSMAUG00000000933) #25	Lin7a (ENSMAUG00000007088) #26	Acss3 (ENSMAUG00000014131) #28	ENSMAUG00000019031	Ppfia2 (ENSMAUG00000021622) #30	Ccdc59 (ENSMAUG00000017516) #32	Mettl25 (ENSMAUG00000020950) #33	Tmtc2 (ENSMAUG00000015691) #35	Slc6a15 (ENSMAUG00000018360)	ENSMAUG00000001372	Alx1 (ENSMAUG00000015563)	Rassf9 (ENSMAUG00000012420)	Nts (ENSMAUG00000013146)
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Prairie vole	MODERN SPECIES	10	Glipr1l2 (ENSMOCG00000002411)	Glipr1 (ENSMOCG00000022141)	Krr1 (ENSMOCG00000018635)	Phlda1 (ENSMOCG00000021889)	Nap1l1 (ENSMOCG00000012136)	Bbs10 (ENSMOCG00000020010)	Osbpl8 (ENSMOCG00000016633)	Zdhhc17 (ENSMOCG00000002407) #7	Csrp2 (ENSMOCG00000007217) #8	E2f7 (ENSMOCG00000021130) #10	Nav3 (ENSMOCG00000018391) #14	ENSMOCG00000020523	Syt1 (ENSMOCG00000012503) #18	Pawr (ENSMOCG00000019570) #19	Ppp1r12a (ENSMOCG00000018418) #21	Otogl (ENSMOCG00000018409) #22	Ptprq (ENSMOCG00000017842) #23	Myf6 (ENSMOCG00000015833) #24	Myf5 (ENSMOCG00000017847) #25	Lin7a (ENSMOCG00000021369) #26	Acss3 (ENSMOCG00000012086) #28	Ppfia2 (ENSMOCG00000007873) #30	Ccdc59 (ENSMOCG00000006690) #32	Mettl25 (ENSMOCG00000018000) #33	Tmtc2 (ENSMOCG00000012479) #35	ENSMOCG00000016887	ENSMOCG00000010194	Slc6a15 (ENSMOCG00000002838)	ENSMOCG00000019991	Alx1 (ENSMOCG00000007046)	Rassf9 (ENSMOCG00000010972)
Northern American deer mouse	MODERN SPECIES	9	ENSPEMG00000020146	Glipr1 (ENSPEMG00000020190)	Krr1 (ENSPEMG00000020228)	Phlda1 (ENSPEMG00000020277)	Nap1l1 (ENSPEMG00000000646)	Bbs10 (ENSPEMG00000031116)	Osbpl8 (ENSPEMG00000008934)	Zdhhc17 (ENSPEMG00000011257) #7	Csrp2 (ENSPEMG00000012653) #8	E2f7 (ENSPEMG00000013555) #10	Nav3 (ENSPEMG00000003783) #14	Brcc3dc (ENSPEMG00000012864)	Syt1 (ENSPEMG00000011853) #18	Pawr (ENSPEMG00000031267) #19	Ppp1r12a (ENSPEMG00000011824) #21	Otogl (ENSPEMG00000005921) #22	Ptprq (ENSPEMG00000019976) #23	Myf6 (ENSPEMG00000019751) #24	Myf5 (ENSPEMG00000018818) #25	Lin7a (ENSPEMG00000018576) #26	Acss3 (ENSPEMG00000017696) #28	Ppfia2 (ENSPEMG00000015993) #30	Ccdc59 (ENSPEMG00000031144) #32	Mettl25 (ENSPEMG00000013112) #33	Tmtc2 (ENSPEMG00000020725) #35	Mgat4c (ENSPEMG00000019377)	Nts (ENSPEMG00000024525)	Rassf9 (ENSPEMG00000012691)	Alx1 (ENSPEMG00000011110)	Lrriq1 (ENSPEMG00000012353)	Slc6a15 (ENSPEMG00000010154)
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Rat	MODERN SPECIES	17	Glipr1 (ENSRNOG00000026644)	Krr1 (ENSRNOG00000004035)	Phlda1 (ENSRNOG00000004019)	Nap1l1 (ENSRNOG00000003890)	Bbs10 (ENSRNOG00000026913)	ENSRNOG00000062798	Osbpl8 (ENSRNOG00000026962)	Zdhhc17 (ENSRNOG00000003803) #7	Csrp2 (ENSRNOG00000003772) #8	E2f7 (ENSRNOG00000026252) #10	Nav3 (ENSRNOG00000052157) #14	Brcc3dc (ENSRNOG00000070196)	Syt1 (ENSRNOG00000006426) #18	Pawr (ENSRNOG00000005917) #19	Ppp1r12a (ENSRNOG00000004925) #21	Otogl (ENSRNOG00000030316) #22	Ptprq (ENSRNOG00000056915) #23	Myf6 (ENSRNOG00000004878) #24	Myf5 (ENSRNOG00000004768) #25	Lin7a (ENSRNOG00000004527) #26	Acss3 (ENSRNOG00000004448) #28	Ppfia2 (ENSRNOG00000004353) #30	ENSRNOG00000063471	Ccdc59 (ENSRNOG00000004183) #32	Mettl25 (ENSRNOG00000027451) #33	Tmtc2 (ENSRNOG00000004585) #35	Slc6a15 (ENSRNOG00000027468)	Lrriq1 (ENSRNOG00000004564)	Alx1 (ENSRNOG00000004390)	Rassf9 (ENSRNOG00000038574)	Nts (ENSRNOG00000004179)
Mus	ANCESTRAL SPECIES	23	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Shrew mouse	MODERN SPECIES	22	MGP_PahariEiJ_G0031284	Glipr1l2 (MGP_PahariEiJ_G0031285)	Glipr1 (MGP_PahariEiJ_G0031286)	Krr1 (MGP_PahariEiJ_G0031287)	Phlda1 (MGP_PahariEiJ_G0031288)	MGP_PahariEiJ_G0031289	Bbs10 (MGP_PahariEiJ_G0031290)	Osbpl8 (MGP_PahariEiJ_G0031291)	Zdhhc17 (MGP_PahariEiJ_G0031292) #7	Csrp2 (MGP_PahariEiJ_G0031293) #8	E2f7 (MGP_PahariEiJ_G0031294) #10	MGP_PahariEiJ_G0031295 #14	Syt1 (MGP_PahariEiJ_G0031296) #18	Pawr (MGP_PahariEiJ_G0031297) #19	Ppp1r12a (MGP_PahariEiJ_G0031298) #21	MGP_PahariEiJ_G0031299 #22	Ptprq (MGP_PahariEiJ_G0031300) #23	Myf6 (MGP_PahariEiJ_G0031301) #24	Myf5 (MGP_PahariEiJ_G0031302) #25	Lin7a (MGP_PahariEiJ_G0031303) #26	Acss3 (MGP_PahariEiJ_G0031304) #28	Ppfia2 (MGP_PahariEiJ_G0031305) #30	Ccdc59 (MGP_PahariEiJ_G0031306) #32	Mettl25 (MGP_PahariEiJ_G0031307) #33	Tmtc2 (MGP_PahariEiJ_G0031308) #35	Slc6a15 (MGP_PahariEiJ_G0031309)	MGP_PahariEiJ_G0031310	Alx1 (MGP_PahariEiJ_G0031311)	Rassf9 (MGP_PahariEiJ_G0031312)	Nts (MGP_PahariEiJ_G0031313)	Mgat4c (MGP_PahariEiJ_G0031314)
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000162547.i.a	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00390000000360.r.b.a.b	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000162357	ENSGT00940000162547.i.a	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Steppe mouse	MODERN SPECIES	3222										Nav3 (ENSMSIG00000028730) #14	Syt1 (ENSMSIG00000028850) #18	Pawr (ENSMSIG00000028867) #19	Ppp1r12a (ENSMSIG00000028882) #21	ENSMSIG00000029031	ENSMSIG00000029033	Otogl (ENSMSIG00000029034) #22	Ptprq (ENSMSIG00000029070) #23	Myf6 (ENSMSIG00000029104) #24	Myf5 (ENSMSIG00000029106) #25
spretus	MODERN SPECIES	1	MGP_SPRETEiJ_G0016625	MGP_SPRETEiJ_G0016624	Glipr1 (MGP_SPRETEiJ_G0016623)	Krr1 (MGP_SPRETEiJ_G0016622)	Phlda1 (MGP_SPRETEiJ_G0016621)	Nap1l1 (MGP_SPRETEiJ_G0016620)	Bbs10 (MGP_SPRETEiJ_G0016619)	Osbpl8 (MGP_SPRETEiJ_G0016618)	Zdhhc17 (MGP_SPRETEiJ_G0016617) #7	Csrp2 (MGP_SPRETEiJ_G0016616) #8	E2f7 (MGP_SPRETEiJ_G0016615) #10	Nav3 (MGP_SPRETEiJ_G0016614) #14	Syt1 (MGP_SPRETEiJ_G0016613) #18	Pawr (MGP_SPRETEiJ_G0016612) #19	Ppp1r12a (MGP_SPRETEiJ_G0016611) #21	Otogl (MGP_SPRETEiJ_G0016610) #22	Ptprq (MGP_SPRETEiJ_G0016609) #23	Myf6 (MGP_SPRETEiJ_G0016608) #24	Myf5 (MGP_SPRETEiJ_G0016607) #25	Lin7a (MGP_SPRETEiJ_G0016606) #26	Acss3 (MGP_SPRETEiJ_G0016605) #28	Ppfia2 (MGP_SPRETEiJ_G0016604) #30	Ccdc59 (MGP_SPRETEiJ_G0016603) #32	Mettl25 (MGP_SPRETEiJ_G0016602) #33	Tmtc2 (MGP_SPRETEiJ_G0016601) #35	Slc6a15 (MGP_SPRETEiJ_G0016600)	MGP_SPRETEiJ_G0016599	Alx1 (MGP_SPRETEiJ_G0016598)	Rassf9 (MGP_SPRETEiJ_G0016597)	Nts (MGP_SPRETEiJ_G0016596)	Mgat4c (MGP_SPRETEiJ_G0016595)
Mouse	MODERN SPECIES	1	Glipr1l1 (ENSMUSG00000020213)	Glipr1 (ENSMUSG00000056888)	Krr1 (ENSMUSG00000063334)	Phlda1 (ENSMUSG00000020205)	Nap1l1 (ENSMUSG00000058799)	Bbs10 (ENSMUSG00000035759)	Osbpl8 (ENSMUSG00000020189)	Zdhhc17 (ENSMUSG00000035798) #7	Csrp2 (ENSMUSG00000020186) #8	E2f7 (ENSMUSG00000020185) #10	Nav3 (ENSMUSG00000020181) #14	Brcc3dc (ENSMUSG00000112039)	Syt1 (ENSMUSG00000035864) #18	Pawr (ENSMUSG00000035873) #19	Ppp1r12a (ENSMUSG00000019907) #21	Otogl (ENSMUSG00000091455) #22	Ptprq (ENSMUSG00000035916) #23	Myf6 (ENSMUSG00000035923) #24	Myf5 (ENSMUSG00000000435) #25	Lin7a (ENSMUSG00000019906) #26	Acss3 (ENSMUSG00000035948) #28	Ppfia2 (ENSMUSG00000053825) #30	Ccdc59 (ENSMUSG00000019897) #32	Mettl25 (ENSMUSG00000036009) #33	Tmtc2 (ENSMUSG00000036019) #35	Gm4340 (ENSMUSG00000090854)	Gm20765 (ENSMUSG00000095022)	Gm21312 (ENSMUSG00000094144)	Gm21304 (ENSMUSG00000097550)	Gm8764 (ENSMUSG00000097878)	Gm6763 (ENSMUSG00000097427)
Ryukyu mouse	MODERN SPECIES	1	MGP_CAROLIEiJ_G0015803	Glipr1l2 (MGP_CAROLIEiJ_G0015802)	Glipr1 (MGP_CAROLIEiJ_G0015801)	Krr1 (MGP_CAROLIEiJ_G0015800)	Phlda1 (MGP_CAROLIEiJ_G0015799)	Nap1l1 (MGP_CAROLIEiJ_G0015798)	Bbs10 (MGP_CAROLIEiJ_G0015797)	Osbpl8 (MGP_CAROLIEiJ_G0015796)	Zdhhc17 (MGP_CAROLIEiJ_G0015795) #7	Csrp2 (MGP_CAROLIEiJ_G0015794) #8	E2f7 (MGP_CAROLIEiJ_G0015793) #10	Nav3 (MGP_CAROLIEiJ_G0015792) #14	Syt1 (MGP_CAROLIEiJ_G0015791) #18	MGP_CAROLIEiJ_G0015790 #19	Ppp1r12a (MGP_CAROLIEiJ_G0015789) #21	Otogl (MGP_CAROLIEiJ_G0015788) #22	Ptprq (MGP_CAROLIEiJ_G0015787) #23	Myf6 (MGP_CAROLIEiJ_G0015786) #24	Myf5 (MGP_CAROLIEiJ_G0015785) #25	Lin7a (MGP_CAROLIEiJ_G0015784) #26	Acss3 (MGP_CAROLIEiJ_G0015783) #28	Ppfia2 (MGP_CAROLIEiJ_G0015782) #30	Ccdc59 (MGP_CAROLIEiJ_G0015781) #32	Mettl25 (MGP_CAROLIEiJ_G0015780) #33	Tmtc2 (MGP_CAROLIEiJ_G0015779) #35	Slc6a15 (MGP_CAROLIEiJ_G0015778)	MGP_CAROLIEiJ_G0015777	Alx1 (MGP_CAROLIEiJ_G0015776)	Rassf9 (MGP_CAROLIEiJ_G0015775)	Nts (MGP_CAROLIEiJ_G0015774)	Mgat4c (MGP_CAROLIEiJ_G0015773)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Guinea pig	MODERN SPECIES	9	ENSCPOG00000011301	ENSCPOG00000013925	GLIPR1 (ENSCPOG00000014351)	KRR1 (ENSCPOG00000014353)	PHLDA1 (ENSCPOG00000003245)	NAP1L1 (ENSCPOG00000019420)	BBS10 (ENSCPOG00000038158)	OSBPL8 (ENSCPOG00000001130)	ZDHHC17 (ENSCPOG00000012534) #7	CSRP2 (ENSCPOG00000031460) #8	E2F7 (ENSCPOG00000007375) #10	NAV3 (ENSCPOG00000015431) #14	SYT1 (ENSCPOG00000002054) #18	PAWR (ENSCPOG00000002469) #19	PPP1R12A (ENSCPOG00000004019) #21	OTOGL (ENSCPOG00000022231) #22	PTPRQ (ENSCPOG00000031105) #23	MYF6 (ENSCPOG00000030745) #24	MYF5 (ENSCPOG00000007766) #25	LIN7A (ENSCPOG00000001373) #26	ACSS3 (ENSCPOG00000003451) #28	PPFIA2 (ENSCPOG00000003459) #30	CCDC59 (ENSCPOG00000036718) #32	METTL25 (ENSCPOG00000011621) #33	TMTC2 (ENSCPOG00000005425) #35	SLC6A15 (ENSCPOG00000003103)	ENSCPOG00000022026	ALX1 (ENSCPOG00000027131)	ENSCPOG00000040399	RASSF9 (ENSCPOG00000030989)	NTS (ENSCPOG00000006576)
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Long-tailed chinchilla	MODERN SPECIES	112	GLIPR1 (ENSCLAG00000006364)	KRR1 (ENSCLAG00000005111)	PHLDA1 (ENSCLAG00000006934)	ENSCLAG00000005333	BBS10 (ENSCLAG00000007902)	OSBPL8 (ENSCLAG00000010204)	ENSCLAG00000017859	ZDHHC17 (ENSCLAG00000011124) #7	CSRP2 (ENSCLAG00000008899) #8	E2F7 (ENSCLAG00000007164) #10	NAV3 (ENSCLAG00000012036) #14	ENSCLAG00000005685	SYT1 (ENSCLAG00000004862) #18	PAWR (ENSCLAG00000008196) #19	PPP1R12A (ENSCLAG00000006399) #21	OTOGL (ENSCLAG00000006526) #22	PTPRQ (ENSCLAG00000012232) #23	MYF6 (ENSCLAG00000013875) #24	MYF5 (ENSCLAG00000014410) #25	ENSCLAG00000013764 #26	ACSS3 (ENSCLAG00000005808) #28	PPFIA2 (ENSCLAG00000008120) #30	CCDC59 (ENSCLAG00000015050) #32	METTL25 (ENSCLAG00000014989) #33	TMTC2 (ENSCLAG00000008519) #35	SLC6A15 (ENSCLAG00000009597)	LRRIQ1 (ENSCLAG00000007042)	ALX1 (ENSCLAG00000007151)	RASSF9 (ENSCLAG00000007610)	NTS (ENSCLAG00000007844)	MGAT4C (ENSCLAG00000008726)
Degu	MODERN SPECIES	45	PHLDA1 (ENSODEG00000019456)	ENSODEG00000007344	BBS10 (ENSODEG00000007380)	OSBPL8 (ENSODEG00000007618)	ENSODEG00000007367	ZDHHC17 (ENSODEG00000010670) #7	CSRP2 (ENSODEG00000008449) #8	ENSODEG00000008575 #10	NAV3 (ENSODEG00000010398) #14	ENSODEG00000007970	SYT1 (ENSODEG00000008387) #18	ENSODEG00000007440	PAWR (ENSODEG00000008160) #19	ENSODEG00000019636	PPP1R12A (ENSODEG00000009363) #21	OTOGL (ENSODEG00000007895) #22	PTPRQ (ENSODEG00000007761) #23	MYF6 (ENSODEG00000007305) #24	MYF5 (ENSODEG00000007510) #25	LIN7A (ENSODEG00000007832) #26	ENSODEG00000019454	ACSS3 (ENSODEG00000007503) #28	PPFIA2 (ENSODEG00000007419) #30	CCDC59 (ENSODEG00000009427) #32	METTL25 (ENSODEG00000010203) #33	TMTC2 (ENSODEG00000007730) #35	ENSODEG00000009267	ENSODEG00000009875	SLC6A15 (ENSODEG00000007508)	ENSODEG00000007801	ALX1 (ENSODEG00000008008)
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000039577	ENSHGLG00000033319	ENSHGLG00000008641	ENSHGLG00000044176	ENSHGLG00000004489	ENSHGLG00000009233 #7	ENSHGLG00000008206 #8	E2F7 (ENSHGLG00000006491) #10	NAV3 (ENSHGLG00000012083) #14	ENSHGLG00000010015	ENSHGLG00000042592	SYT1 (ENSHGLG00000047548) #18	PAWR (ENSHGLG00000017940) #19	ENSHGLG00000036431	PPP1R12A (ENSHGLG00000014201) #21	OTOGL (ENSHGLG00000013295) #22	PTPRQ (ENSHGLG00000011762) #23	MYF6 (ENSHGLG00000003419) #24	MYF5 (ENSHGLG00000003654) #25	ENSHGLG00000003757 #26	ACSS3 (ENSHGLG00000004579) #28	PPFIA2 (ENSHGLG00000000429) #30	ENSHGLG00000036317	CCDC59 (ENSHGLG00000001711) #32	METTL25 (ENSHGLG00000038393) #33	TMTC2 (ENSHGLG00000000320) #35	ENSHGLG00000018244	ENSHGLG00000000758	ENSHGLG00000000965	LRRIQ1 (ENSHGLG00000000302)	ALX1 (ENSHGLG00000000937)
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775.ab	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417	ENSGT00960000192410	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775.ab	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775.ab	ENSGT00440000039564.b	ENSGT00940000153362.a.hb.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Arctic ground squirrel	MODERN SPECIES	177					ENSUPAG00010004960	ENSUPAG00010004967	BBS10 (ENSUPAG00010005089)	OSBPL8 (ENSUPAG00010005095)	ZDHHC17 (ENSUPAG00010005181) #7	CSRP2 (ENSUPAG00010005224) #8	E2F7 (ENSUPAG00010005233) #10	NAV3 (ENSUPAG00010005261) #14	SYT1 (ENSUPAG00010005294) #18	PAWR (ENSUPAG00010005305) #19	PPP1R12A (ENSUPAG00010005325) #21	OTOGL (ENSUPAG00010005372) #22
Squirrel	MODERN SPECIES	298													SYT1 (ENSSTOG00000022817) #18	PAWR (ENSSTOG00000015765) #19	PPP1R12A (ENSSTOG00000011329) #21	OTOGL (ENSSTOG00000019523) #22	PTPRQ (ENSSTOG00000024058) #23	MYF6 (ENSSTOG00000015808) #24	MYF5 (ENSSTOG00000015810) #25	LIN7A (ENSSTOG00000015812) #26	ACSS3 (ENSSTOG00000013956) #28	PPFIA2 (ENSSTOG00000013971) #30
Alpin marmot	MODERN SPECIES	11	CAPS2 (ENSMMMG00000002609)	GLIPR1L1 (ENSMMMG00000002592)	GLIPR1L2 (ENSMMMG00000002582)	GLIPR1 (ENSMMMG00000002546)	KRR1 (ENSMMMG00000002493)	PHLDA1 (ENSMMMG00000002474)	ENSMMMG00000002289	BBS10 (ENSMMMG00000002273)	OSBPL8 (ENSMMMG00000002240)	ZDHHC17 (ENSMMMG00000002185) #7	ENSMMMG00000002164 #8	E2F7 (ENSMMMG00000002119) #10	NAV3 (ENSMMMG00000002035) #14	SYT1 (ENSMMMG00000001991) #18	PPP1R12A (ENSMMMG00000001751) #21	OTOGL (ENSMMMG00000001599) #22	PTPRQ (ENSMMMG00000001485) #23	MYF6 (ENSMMMG00000001463) #24	MYF5 (ENSMMMG00000001446) #25	LIN7A (ENSMMMG00000001429) #26	ACSS3 (ENSMMMG00000001391) #28	PPFIA2 (ENSMMMG00000001244) #30	CCDC59 (ENSMMMG00000001213) #32	METTL25 (ENSMMMG00000001158) #33	TMTC2 (ENSMMMG00000001120) #35	ENSMMMG00000001090	SLC6A15 (ENSMMMG00000001050)	TSPAN19 (ENSMMMG00000001031)	LRRIQ1 (ENSMMMG00000000979)	ALX1 (ENSMMMG00000000949)	NTS (ENSMMMG00000000924)
Eurasian red squirrel	MODERN SPECIES	14	GLIPR1 (ENSSVLG00005023023)	KRR1 (ENSSVLG00005023069)	ENSSVLG00005023108	NAP1L1 (ENSSVLG00005023160)	BBS10 (ENSSVLG00005023257)	ENSSVLG00005023266	OSBPL8 (ENSSVLG00005023307)	ZDHHC17 (ENSSVLG00005023480) #7	ENSSVLG00005023521 #8	E2F7 (ENSSVLG00005023615) #10	ENSSVLG00005023728	NAV3 (ENSSVLG00005023837) #14	SYT1 (ENSSVLG00005024299) #18	PAWR (ENSSVLG00005024360) #19	PPP1R12A (ENSSVLG00005024407) #21	OTOGL (ENSSVLG00005024601) #22	PTPRQ (ENSSVLG00005025041) #23	MYF6 (ENSSVLG00005025222) #24	MYF5 (ENSSVLG00005025239) #25	LIN7A (ENSSVLG00005025250) #26	BLVRB (ENSSVLG00005025266)	ACSS3 (ENSSVLG00005000239) #28	PPFIA2 (ENSSVLG00005001201) #30	CCDC59 (ENSSVLG00005002316) #32	METTL25 (ENSSVLG00005002343) #33	TMTC2 (ENSSVLG00005002395) #35	SLC6A15 (ENSSVLG00005002476)	TSPAN19 (ENSSVLG00005002560)	LRRIQ1 (ENSSVLG00005002609)	ALX1 (ENSSVLG00005002747)	RASSF9 (ENSSVLG00005002780)
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898	ENSGT00940000158251
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000160727	ENSGT00390000018775	ENSGT00390000014572.eb.b	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000154172.ab.b	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000160727	ENSGT00390000018775	ENSGT00390000014572.eb.b	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000154172.ab.b	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00390000014572.eb.b	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000154172.ab.b	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000160727	ENSGT00390000018775	ENSGT00390000014572.eb.b	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000154172.ab.b	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00390000004735.A.n	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00390000018775	ENSGT00390000014572.eb.b	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.bb.a #8	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000154172.ab.b	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00390000004735.A.n	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Narwhal	MODERN SPECIES	313	ENSMMNG00015016472	PHLDA1 (ENSMMNG00015016497)	NAP1L1 (ENSMMNG00015016626)	BBS10 (ENSMMNG00015017120)	OSBPL8 (ENSMMNG00015017163)	ZDHHC17 (ENSMMNG00015017285) #7	ENSMMNG00015017474	CSRP2 (ENSMMNG00015017494) #8	E2F7 (ENSMMNG00015017553) #10	NAV3 (ENSMMNG00015017728) #14	SYT1 (ENSMMNG00015017994) #18	PAWR (ENSMMNG00015018035) #19	ENSMMNG00015018085	PPP1R12A (ENSMMNG00015018194) #21	ENSMMNG00015018420	OTOGL (ENSMMNG00015018567) #22	PTPRQ (ENSMMNG00015019359) #23	MYF6 (ENSMMNG00015019715) #24	MYF5 (ENSMMNG00015019736) #25	LIN7A (ENSMMNG00015019774) #26	ENSMMNG00015019830	ACSS3 (ENSMMNG00015019853) #28	PPFIA2 (ENSMMNG00015020218) #30	CCDC59 (ENSMMNG00015020720) #32	METTL25 (ENSMMNG00015020747) #33	TMTC2 (ENSMMNG00015020798) #35	FAM50A (ENSMMNG00015020820)	SLC6A15 (ENSMMNG00015020847)	TSPAN19 (ENSMMNG00015020883)	LRRIQ1 (ENSMMNG00015020965)	ALX1 (ENSMMNG00015020997)
Beluga whale	MODERN SPECIES	39	PHLDA1 (ENSDLEG00000007521)	ENSDLEG00000007438	BBS10 (ENSDLEG00000007426)	OSBPL8 (ENSDLEG00000007401)	ENSDLEG00000007371	ZDHHC17 (ENSDLEG00000007362) #7	CSRP2 (ENSDLEG00000007353) #8	ENSDLEG00000007329 #10	ENSDLEG00000007322 #10	NAV3 (ENSDLEG00000006608) #14	SYT1 (ENSDLEG00000006456) #18	ENSDLEG00000006452	PAWR (ENSDLEG00000006445) #19	ENSDLEG00000006442	PPP1R12A (ENSDLEG00000006433) #21	OTOGL (ENSDLEG00000006234) #22	PTPRQ (ENSDLEG00000006066) #23	MYF6 (ENSDLEG00000006023) #24	MYF5 (ENSDLEG00000006018) #25	LIN7A (ENSDLEG00000005973) #26	ACSS3 (ENSDLEG00000005911) #28	PPFIA2 (ENSDLEG00000005438) #30
Vaquita	MODERN SPECIES	1	ENSPSNG00000011534	ENSPSNG00000011336	BBS10 (ENSPSNG00000011255)	OSBPL8 (ENSPSNG00000010975)	ENSPSNG00000010941	ENSPSNG00000010920	ZDHHC17 (ENSPSNG00000010872) #7	CSRP2 (ENSPSNG00000010823) #8	E2F7 (ENSPSNG00000010547) #10	NAV3 (ENSPSNG00000009074) #14	ENSPSNG00000008562	SYT1 (ENSPSNG00000008513) #18	PAWR (ENSPSNG00000008439) #19	ENSPSNG00000008403	PPP1R12A (ENSPSNG00000008207) #21	OTOGL (ENSPSNG00000007188) #22	PTPRQ (ENSPSNG00000006652) #23	MYF6 (ENSPSNG00000006531) #24	MYF5 (ENSPSNG00000006510) #25	LIN7A (ENSPSNG00000006484) #26	ACSS3 (ENSPSNG00000006403) #28	PPFIA2 (ENSPSNG00000005685) #30	ENSPSNG00000005450 #32	METTL25 (ENSPSNG00000005420) #33	FAM50A (ENSPSNG00000005402)	TMTC2 (ENSPSNG00000005299) #35	ENSPSNG00000005260	SLC6A15 (ENSPSNG00000005229)	TSPAN19 (ENSPSNG00000005188)	LRRIQ1 (ENSPSNG00000005070)	ALX1 (ENSPSNG00000005010)
Sperm whale	MODERN SPECIES	17	ENSPCTG00005009342	PHLDA1 (ENSPCTG00005009371)	NAP1L1 (ENSPCTG00005009406)	ENSPCTG00005009623	ENSPCTG00005009647	BBS10 (ENSPCTG00005009666)	OSBPL8 (ENSPCTG00005009709)	ZDHHC17 (ENSPCTG00005009874) #7	CSRP2 (ENSPCTG00005009938) #8	E2F7 (ENSPCTG00005009995) #10	NAV3 (ENSPCTG00005010415) #14	SYT1 (ENSPCTG00005012311) #18	PAWR (ENSPCTG00005012474) #19	PPP1R12A (ENSPCTG00005012575) #21	ENSPCTG00005012953	OTOGL (ENSPCTG00005013033) #22	PTPRQ (ENSPCTG00005015293) #23	MYF6 (ENSPCTG00005016374) #24	MYF5 (ENSPCTG00005016429) #25	LIN7A (ENSPCTG00005016469) #26	ACSS3 (ENSPCTG00005016578) #28	PPFIA2 (ENSPCTG00005017124) #30	CCDC59 (ENSPCTG00005020122) #32	METTL25 (ENSPCTG00005020146) #33	ENSPCTG00005020220	TMTC2 (ENSPCTG00005020242) #35	SLC6A15 (ENSPCTG00005020350)	TSPAN19 (ENSPCTG00005020436)	LRRIQ1 (ENSPCTG00005020500)	ALX1 (ENSPCTG00005020630)	RASSF9 (ENSPCTG00005020645)
Blue whale	MODERN SPECIES	1	KRR1 (ENSBMSG00010020702)	ENSBMSG00010020727	PHLDA1 (ENSBMSG00010020734)	NAP1L1 (ENSBMSG00010020766)	BBS10 (ENSBMSG00010020864)	OSBPL8 (ENSBMSG00010020883)	ZDHHC17 (ENSBMSG00010020913) #7	CSRP2 (ENSBMSG00010020929) #8	E2F7 (ENSBMSG00010020948) #10	NAV3 (ENSBMSG00010021020) #14	ENSBMSG00010021165	SYT1 (ENSBMSG00010021177) #18	PAWR (ENSBMSG00010021183) #19	PPP1R12A (ENSBMSG00010021198) #21	ENSBMSG00010021208	OTOGL (ENSBMSG00010021255) #22	PTPRQ (ENSBMSG00010007468) #23	MYF6 (ENSBMSG00010007564) #24	MYF5 (ENSBMSG00010007571) #25	LIN7A (ENSBMSG00010007592) #26	ENSBMSG00010007609	ACSS3 (ENSBMSG00010007621) #28	PPFIA2 (ENSBMSG00010007808) #30	CCDC59 (ENSBMSG00010008631) #32	METTL25 (ENSBMSG00010008637) #33	ENSBMSG00010008650	TMTC2 (ENSBMSG00010008658) #35	ENSBMSG00010008664	SLC6A15 (ENSBMSG00010008679)	TSPAN19 (ENSBMSG00010008692)	LRRIQ1 (ENSBMSG00010008720)
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00390000012446.o.b	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000013187.b	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251
Bovinae	ANCESTRAL SPECIES	17	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb.b.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00390000012446.o.b	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000013187.b	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251
Bos	ANCESTRAL SPECIES	2	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb.b.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00390000012446.o.b	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000003710.c.a.b.b	ENSGT00390000006546.i #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb.b.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00390000012446.o.b	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000168324	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.a.a.b.a.a.a	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000013187.b	ENSGT00390000003710.c.a.b.b	ENSGT00390000006546.i #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725
Domestic yak	MODERN SPECIES	24	BBS10 (ENSBGRG00000010078)	OSBPL8 (ENSBGRG00000009892)	ENSBGRG00000009858	ZDHHC17 (ENSBGRG00000009471) #7	ENSBGRG00000009376 #8	E2F7 (ENSBGRG00000009145) #10	ENSBGRG00000009095	ENSBGRG00000009079	ENSBGRG00000009036	NAV3 (ENSBGRG00000007767) #14	SYT1 (ENSBGRG00000007621) #18	ENSBGRG00000007603	PAWR (ENSBGRG00000007479) #19	ENSBGRG00000007448	PPP1R12A (ENSBGRG00000006560) #21	OTOGL (ENSBGRG00000005461) #22	ENSBGRG00000005290	PTPRQ (ENSBGRG00000003831) #23	MYF6 (ENSBGRG00000003786) #24	MYF5 (ENSBGRG00000003759) #25	ENSBGRG00000003736	LIN7A (ENSBGRG00000003708) #26	ENSBGRG00000003689	ACSS3 (ENSBGRG00000003619) #28	ENSBGRG00000003602	ENSBGRG00000003592	PPFIA2 (ENSBGRG00000003359) #30	CCDC59 (ENSBGRG00000003316) #32	ENSBGRG00000003305	METTL25 (ENSBGRG00000003283) #33	ENSBGRG00000003272
Wild yak	MODERN SPECIES	1349																OTOGL (ENSBMUG00000015677) #22
Bos_b	ANCESTRAL SPECIES	4	ENSGT00440000039564.b	ENSGT00940000153362.a.cb.b.b.f.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00390000012446.o.b	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT01030000234758.a.a.b.a.a.b.b.a.a	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000013187.b	ENSGT00390000006546.i #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00390000005003.k.b	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251
Hybrid Bos Indicus	MODERN SPECIES	24	PHLDA1 (ENSBIXG00005029359)	ENSBIXG00005029325	BBS10 (ENSBIXG00005029298)	ENSBIXG00005029293	OSBPL8 (ENSBIXG00005007884)	ZDHHC17 (ENSBIXG00005000041) #7	CSRP2 (ENSBIXG00005007979) #8	E2F7 (ENSBIXG00005008016) #10	ENSBIXG00005008045	NAV3 (ENSBIXG00005000135) #14	ENSBIXG00005008283	SYT1 (ENSBIXG00005008356) #18	PAWR (ENSBIXG00005000179) #19	ENSBIXG00005000182	PPP1R12A (ENSBIXG00005000226) #21	OTOGL (ENSBIXG00005008900) #22	PTPRQ (ENSBIXG00005009087) #23	MYF6 (ENSBIXG00005009131) #24	MYF5 (ENSBIXG00005009143) #25	LIN7A (ENSBIXG00005009155) #26	ENSBIXG00005009169	ACSS3 (ENSBIXG00005009198) #28	ENSBIXG00005009217	ENSBIXG00005006705	PPFIA2 (ENSBIXG00005009447) #30	ENSBIXG00005009547 #32	ENSBIXG00005009553	METTL25 (ENSBIXG00005009587) #33	TMTC2 (ENSBIXG00005009679) #35	ENSBIXG00005000567	SLC6A15 (ENSBIXG00005009785)
Cow	MODERN SPECIES	24	GLIPR1 (ENSBTAG00000011590)	KRR1 (ENSBTAG00000011591)	PHLDA1 (ENSBTAG00000034985)	BBS10 (ENSBTAG00000050467)	OSBPL8 (ENSBTAG00000004427)	ZDHHC17 (ENSBTAG00000021756) #7	CSRP2 (ENSBTAG00000013406) #8	E2F7 (ENSBTAG00000016931) #10	ENSBTAG00000054109	NAV3 (ENSBTAG00000009852) #14	ENSBTAG00000054695	SYT1 (ENSBTAG00000034693) #18	PAWR (ENSBTAG00000043949) #19	ENSBTAG00000048833	PPP1R12A (ENSBTAG00000014609) #21	OTOGL (ENSBTAG00000011336) #22	PTPRQ (ENSBTAG00000026977) #23	MYF6 (ENSBTAG00000014003) #24	MYF5 (ENSBTAG00000026972) #25	LIN7A (ENSBTAG00000011367) #26	ACSS3 (ENSBTAG00000018694) #28	PPFIA2 (ENSBTAG00000003036) #30	ENSBTAG00000053526	ENSBTAG00000052152	CCDC59 (ENSBTAG00000036282) #32	METTL25 (ENSBTAG00000008382) #33	TMTC2 (ENSBTAG00000002888) #35	ENSBTAG00000014765	SLC6A15 (ENSBTAG00000018432)	LRRIQ1 (ENSBTAG00000027900)	TSPAN19 (ENSBTAG00000047203)
American bison	MODERN SPECIES	3377													SYT1 (ENSBBBG00000005031) #18	PAWR (ENSBBBG00000006786) #19	PPP1R12A (ENSBBBG00000020255) #21	OTOGL (ENSBBBG00000020070) #22	PTPRQ (ENSBBBG00000005139) #23	MYF6 (ENSBBBG00000007672) #24	MYF5 (ENSBBBG00000005327) #25	LIN7A (ENSBBBG00000019615) #26	ACSS3 (ENSBBBG00000019602) #28	PPFIA2 (ENSBBBG00000006966) #30	ENSBBBG00000004945	CCDC59 (ENSBBBG00000019197) #32	METTL25 (ENSBBBG00000004939) #33	TMTC2 (ENSBBBG00000009162) #35	SLC6A15 (ENSBBBG00000004924)	TSPAN19 (ENSBBBG00000019123)	LRRIQ1 (ENSBBBG00000004903)	ALX1 (ENSBBBG00000004860)	RASSF9 (ENSBBBG00000019025)
Caprinae	ANCESTRAL SPECIES		ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.cb.b	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a.n #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000013187.b	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c
Goat	MODERN SPECIES	24	GLIPR1 (ENSCHIG00000024224)	KRR1 (ENSCHIG00000018496)	PHLDA1 (ENSCHIG00000005054)	BBS10 (ENSCHIG00000016567)	OSBPL8 (ENSCHIG00000010416)	ZDHHC17 (ENSCHIG00000009471) #7	CSRP2 (ENSCHIG00000025767) #8	E2F7 (ENSCHIG00000023455) #10	ENSCHIG00000017418	ENSCHIG00000009714	NAV3 (ENSCHIG00000012255) #14	ENSCHIG00000020619	SYT1 (ENSCHIG00000027174) #18	PAWR (ENSCHIG00000014049) #19	PPP1R12A (ENSCHIG00000007263) #21	OTOGL (ENSCHIG00000001357) #22	PTPRQ (ENSCHIG00000026657) #23	MYF6 (ENSCHIG00000021667) #24	MYF5 (ENSCHIG00000015029) #25	LIN7A (ENSCHIG00000003123) #26	ACSS3 (ENSCHIG00000023281) #28	PPFIA2 (ENSCHIG00000022919) #30	ENSCHIG00000005384	ENSCHIG00000025817 #32	METTL25 (ENSCHIG00000003929) #33	TMTC2 (ENSCHIG00000021548) #35	SLC6A15 (ENSCHIG00000017725)	TSPAN19 (ENSCHIG00000013366)	LRRIQ1 (ENSCHIG00000027155)	ALX1 (ENSCHIG00000025423)	RASSF9 (ENSCHIG00000024146)
Siberian musk deer	MODERN SPECIES	162												NAV3 (ENSMMSG00000008114) #14	SYT1 (ENSMMSG00000009031) #18	PAWR (ENSMMSG00000009120) #19	PPP1R12A (ENSMMSG00000009175) #21	OTOGL (ENSMMSG00000009620) #22	PTPRQ (ENSMMSG00000010710) #23	MYF6 (ENSMMSG00000011253) #24	MYF5 (ENSMMSG00000011275) #25	LIN7A (ENSMMSG00000011300) #26	ACSS3 (ENSMMSG00000011333) #28	ENSMMSG00000011493	PPFIA2 (ENSMMSG00000011641) #30	CCDC59 (ENSMMSG00000013247) #32	METTL25 (ENSMMSG00000013268) #33	TMTC2 (ENSMMSG00000013292) #35	SLC6A15 (ENSMMSG00000013333)	TSPAN19 (ENSMMSG00000013408)	LRRIQ1 (ENSMMSG00000013457)	ALX1 (ENSMMSG00000013694)	RASSF9 (ENSMMSG00000013706)
Yarkand deer	MODERN SPECIES	22	KRR1 (ENSCHYG00000008210)	PHLDA1 (ENSCHYG00000008287)	ENSCHYG00000008327	OSBPL8 (ENSCHYG00000008637)	ZDHHC17 (ENSCHYG00000009052) #7	CSRP2 (ENSCHYG00000009422) #8	ENSCHYG00000009520	E2F7 (ENSCHYG00000009596) #10	ENSCHYG00000009932	NAV3 (ENSCHYG00000010069) #14	ENSCHYG00000011512	SYT1 (ENSCHYG00000011518) #18	PAWR (ENSCHYG00000011616) #19	ENSCHYG00000011841	PPP1R12A (ENSCHYG00000011940) #21	OTOGL (ENSCHYG00000013254) #22	PTPRQ (ENSCHYG00000015685) #23	MYF6 (ENSCHYG00000017934) #24	MYF5 (ENSCHYG00000018006) #25	LIN7A (ENSCHYG00000018063) #26	ACSS3 (ENSCHYG00000018161) #28	PPFIA2 (ENSCHYG00000018601) #30	ENSCHYG00000021532	CCDC59 (ENSCHYG00000021567) #32	METTL25 (ENSCHYG00000021623) #33	TMTC2 (ENSCHYG00000021769) #35	SLC6A15 (ENSCHYG00000021957)	TSPAN19 (ENSCHYG00000022031)	LRRIQ1 (ENSCHYG00000022133)	ALX1 (ENSCHYG00000022696)	RASSF9 (ENSCHYG00000022760)
Camelidae	ANCESTRAL SPECIES	39	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Arabian camel	MODERN SPECIES	3	ENSCDRG00005017179	ENSCDRG00005017149	ENSCDRG00005017128	ENSCDRG00005017029	PHLDA1 (ENSCDRG00005016995)	NAP1L1 (ENSCDRG00005016698)	BBS10 (ENSCDRG00005016659)	OSBPL8 (ENSCDRG00005016392)	ZDHHC17 (ENSCDRG00005016120) #7	CSRP2 (ENSCDRG00005016043) #8	E2F7 (ENSCDRG00005015968) #10	NAV3 (ENSCDRG00005014880) #14	SYT1 (ENSCDRG00005014660) #18	PAWR (ENSCDRG00005014596) #19	PPP1R12A (ENSCDRG00005012542) #21	OTOGL (ENSCDRG00005010509) #22	PTPRQ (ENSCDRG00005009356) #23	MYF6 (ENSCDRG00005009281) #24	MYF5 (ENSCDRG00005009235) #25	LIN7A (ENSCDRG00005009181) #26	ACSS3 (ENSCDRG00005008842) #28	PPFIA2 (ENSCDRG00005005786) #30	CCDC59 (ENSCDRG00005005635) #32	METTL25 (ENSCDRG00005005578) #33	TMTC2 (ENSCDRG00005005499) #35	SLC6A15 (ENSCDRG00005005426)	TSPAN19 (ENSCDRG00005005374)	LRRIQ1 (ENSCDRG00005005175)	ALX1 (ENSCDRG00005005138)	RASSF9 (ENSCDRG00005005130)	NTS (ENSCDRG00005005109)
Suina	ANCESTRAL SPECIES	4	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Chacoan peccary	MODERN SPECIES	871	GLIPR1L2 (ENSCWAG00000005529)	GLIPR1 (ENSCWAG00000005686)	KRR1 (ENSCWAG00000005721)	ENSCWAG00000005880	PHLDA1 (ENSCWAG00000005900)	NAP1L1 (ENSCWAG00000005937)	BBS10 (ENSCWAG00000006105)	OSBPL8 (ENSCWAG00000006143)	ZDHHC17 (ENSCWAG00000006304) #7	CSRP2 (ENSCWAG00000006361) #8	E2F7 (ENSCWAG00000006403) #10	NAV3 (ENSCWAG00000006671) #14	SYT1 (ENSCWAG00000007382) #18	PAWR (ENSCWAG00000007454) #19	PPP1R12A (ENSCWAG00000007564) #21	OTOGL (ENSCWAG00000007720) #22	PTPRQ (ENSCWAG00000009402) #23	MYF6 (ENSCWAG00000010168) #24	MYF5 (ENSCWAG00000010199) #25	LIN7A (ENSCWAG00000010238) #26	ACSS3 (ENSCWAG00000010300) #28	PPFIA2 (ENSCWAG00000010523) #30	CCDC59 (ENSCWAG00000013098) #32	METTL25 (ENSCWAG00000013127) #33	TMTC2 (ENSCWAG00000013168) #35
Pig	MODERN SPECIES	13				ENSSSCG00000025041	ZDHHC17 (ENSSSCG00000000952) #7	CSRP2 (ENSSSCG00000000951) #8	ENSSSCG00000043521	E2F7 (ENSSSCG00000000950) #10	ENSSSCG00000044299	NAV3 (ENSSSCG00000029249) #14	ENSSSCG00000052129	ENSSSCG00000049637	SYT1 (ENSSSCG00000000948) #18	PAWR (ENSSSCG00000036560) #19	PPP1R12A (ENSSSCG00000038973) #21	OTOGL (ENSSSCG00000000943) #22	PTPRQ (ENSSSCG00000031716) #23	MYF6 (ENSSSCG00000026533) #24	MYF5 (ENSSSCG00000000937) #25	ENSSSCG00000042719	LIN7A (ENSSSCG00000040348) #26	ACSS3 (ENSSSCG00000000939) #28	PPFIA2 (ENSSSCG00000000940) #30	CCDC59 (ENSSSCG00000038987) #32	METTL25 (ENSSSCG00000000941) #33	TMTC2 (ENSSSCG00000024065) #35	ENSSSCG00000042278	SLC6A15 (ENSSSCG00000000936)	TSPAN19 (ENSSSCG00000040399)	LRRIQ1 (ENSSSCG00000000934)	ALX1 (ENSSSCG00000036744)
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Giant Panda	MODERN SPECIES	6	GLIPR1L2 (ENSAMEG00000006424)	GLIPR1 (ENSAMEG00000006427)	KRR1 (ENSAMEG00000006437)	PHLDA1 (ENSAMEG00000006460)	NAP1L1 (ENSAMEG00000006463)	BBS10 (ENSAMEG00000006510)	OSBPL8 (ENSAMEG00000006513)	ZDHHC17 (ENSAMEG00000006600) #7	CSRP2 (ENSAMEG00000006632) #8	E2F7 (ENSAMEG00000007247) #10	ENSAMEG00000024301	NAV3 (ENSAMEG00000006673) #14	SYT1 (ENSAMEG00000013376) #18	PAWR (ENSAMEG00000013370) #19	PPP1R12A (ENSAMEG00000013280) #21	OTOGL (ENSAMEG00000013267) #22	PTPRQ (ENSAMEG00000013219) #23	MYF6 (ENSAMEG00000027013) #24	MYF5 (ENSAMEG00000013193) #25	LIN7A (ENSAMEG00000013191) #26	ACSS3 (ENSAMEG00000013162) #28	PPFIA2 (ENSAMEG00000013096) #30	CCDC59 (ENSAMEG00000016875) #32	METTL25 (ENSAMEG00000016877) #33	TMTC2 (ENSAMEG00000016881) #35	SLC6A15 (ENSAMEG00000009013)	TSPAN19 (ENSAMEG00000009009)	LRRIQ1 (ENSAMEG00000024972)	ALX1 (ENSAMEG00000009049)	RASSF9 (ENSAMEG00000006110)	NTS (ENSAMEG00000006112)
Ursus	ANCESTRAL SPECIES	260														ENSGT00940000155394 #18	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30
Polar bear	MODERN SPECIES	410														SYT1 (ENSUMAG00000004449) #18	PPP1R12A (ENSUMAG00000004409) #21	OTOGL (ENSUMAG00000004235) #22	PTPRQ (ENSUMAG00000004116) #23	MYF6 (ENSUMAG00000004099) #24	MYF5 (ENSUMAG00000004083) #25	LIN7A (ENSUMAG00000004070) #26	ACSS3 (ENSUMAG00000003597) #28	PPFIA2 (ENSUMAG00000003393) #30
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215.b.a #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
American mink	MODERN SPECIES	22	KRR1 (ENSNVIG00000003506)	PHLDA1 (ENSNVIG00000003490)	ENSNVIG00000003475	ENSNVIG00000003110	BBS10 (ENSNVIG00000003073)	OSBPL8 (ENSNVIG00000002847)	ZDHHC17 (ENSNVIG00000002801) #7	ENSNVIG00000002763 #8	E2F7 (ENSNVIG00000002695) #10	NAV3 (ENSNVIG00000002412) #14	ENSNVIG00000002371	SYT1 (ENSNVIG00000002313) #18	PAWR (ENSNVIG00000002283) #19	PPP1R12A (ENSNVIG00000001940) #21	ENSNVIG00000001919	OTOGL (ENSNVIG00000001579) #22	PTPRQ (ENSNVIG00000001320) #23	MYF6 (ENSNVIG00000001298) #24	MYF5 (ENSNVIG00000001283) #25	LIN7A (ENSNVIG00000001269) #26	ACSS3 (ENSNVIG00000001229) #28	PPFIA2 (ENSNVIG00000000848) #30	TAP26 (ENSNVIG00000000828) #32	METTL25 (ENSNVIG00000000819) #33	TMTC2 (ENSNVIG00000000786) #35	ENSNVIG00000000773	S6A15 (ENSNVIG00000000728)	TSN19 (ENSNVIG00000000703)	LRRIQ1 (ENSNVIG00000000618)	ALX1 (ENSNVIG00000000603)	RASSF9 (ENSNVIG00000000592)
Ferret	MODERN SPECIES	196	NAP1L1 (ENSMPUG00000017474)	BBS10 (ENSMPUG00000017473)	OSBPL8 (ENSMPUG00000017472)	ENSMPUG00000017471	ZDHHC17 (ENSMPUG00000017470) #7	CSRP2 (ENSMPUG00000017469) #8	E2F7 (ENSMPUG00000017468) #10	ENSMPUG00000017467	ENSMPUG00000017466	NAV3 (ENSMPUG00000017465) #14	ENSMPUG00000017464	SYT1 (ENSMPUG00000017463) #18	PAWR (ENSMPUG00000017462) #19	ENSMPUG00000017461	PPP1R12A (ENSMPUG00000017460) #21	OTOGL (ENSMPUG00000017459) #22	ENSMPUG00000017458	ENSMPUG00000017457
Canidae	ANCESTRAL SPECIES	12	ENSGT00940000163058	ENSGT00390000018775	ENSGT00390000005922.b.d.b.a.j	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT01090000260040.a.a.a.c.b
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00390000005922.b.d.b.a.j	ENSGT00940000154612.m.a.g.a.b	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713.q #10	ENSGT00940000158890.p.a.f	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT01090000260040.a.a.a.c.b
Dingo	MODERN SPECIES	277	ENSCAFG00020015316	NAP1L1 (ENSCAFG00020015328)	BBS10 (ENSCAFG00020015335)	OSBPL8 (ENSCAFG00020015356)	ZDHHC17 (ENSCAFG00020015453) #7	CSRP2 (ENSCAFG00020015512) #8	ENSCAFG00020015518 #10	ENSCAFG00020015522 #10	ENSCAFG00020015528	ENSCAFG00020015535	NAV3 (ENSCAFG00020015546) #14	ENSCAFG00020015601	SYT1 (ENSCAFG00020015603) #18	PAWR (ENSCAFG00020015607) #19	PPP1R12A (ENSCAFG00020015626) #21	OTOGL (ENSCAFG00020015840) #22	PTPRQ (ENSCAFG00020015957) #23	MYF6 (ENSCAFG00020016005) #24	MYF5 (ENSCAFG00020016010) #25	LIN7A (ENSCAFG00020016013) #26	ACSS3 (ENSCAFG00020016033) #28	PPFIA2 (ENSCAFG00020016113) #30	CCDC59 (ENSCAFG00020016153) #32	METTL25 (ENSCAFG00020016154) #33	TMTC2 (ENSCAFG00020016159) #35	ENSCAFG00020016180	SLC6A15 (ENSCAFG00020016183)	TSPAN19 (ENSCAFG00020016187)	LRRIQ1 (ENSCAFG00020016192)	ALX1 (ENSCAFG00020016217)	RASSF9 (ENSCAFG00020016220)
Dog	MODERN SPECIES	6	ENSCAFG00845005752	NAP1L1 (ENSCAFG00845005932)	ENSCAFG00845006055	OSBPL8 (ENSCAFG00845006103)	OSBPL8 (ENSCAFG00845006249)	ZDHHC17 (ENSCAFG00845006644) #7	ENSCAFG00845006746 #8	E2F7 (ENSCAFG00845006897) #10	ENSCAFG00845007259	NAV3 (ENSCAFG00845007345) #14	SYT1 (ENSCAFG00845007651) #18	PAWR (ENSCAFG00845007786) #19	PPP1R12A (ENSCAFG00845007952) #21	ENSCAFG00845008317	ENSCAFG00845008343	OTOGL (ENSCAFG00845008423) #22	PTPRQ (ENSCAFG00845008887) #23	MYF6 (ENSCAFG00845009704) #24	ENSCAFG00845009734 #25	LIN7A (ENSCAFG00845009762) #26	ACSS3 (ENSCAFG00845009887) #28	PPFIA2 (ENSCAFG00845010311) #30	CCDC59 (ENSCAFG00845011151) #32	METTL25 (ENSCAFG00845011219) #33	TMTC2 (ENSCAFG00845011393) #35	SLC6A15 (ENSCAFG00845011599)	TSPAN19 (ENSCAFG00845011710)	LRRIQ1 (ENSCAFG00845011806)	ALX1 (ENSCAFG00845012248)	RASSF9 (ENSCAFG00845012311)	ENSCAFG00845012341
Red fox	MODERN SPECIES	9	ENSVVUG00000009540	OR4E2 (ENSVVUG00000009557)	OR4E1 (ENSVVUG00000009561)	KRR1 (ENSVVUG00000009566)	ENSVVUG00000009581	NAP1L1 (ENSVVUG00000009610)	BBS10 (ENSVVUG00000009650)	OSBPL8 (ENSVVUG00000009692)	ZDHHC17 (ENSVVUG00000009811) #7	CSRP2 (ENSVVUG00000009828) #8	E2F7 (ENSVVUG00000009839) #10	NAV3 (ENSVVUG00000009882) #14	SYT1 (ENSVVUG00000009998) #18	PAWR (ENSVVUG00000010028) #19	PPP1R12A (ENSVVUG00000010043) #21	OTOGL (ENSVVUG00000010103) #22	ENSVVUG00000010366	PTPRQ (ENSVVUG00000010403) #23	MYF6 (ENSVVUG00000010529) #24	ENSVVUG00000010537 #25	LIN7A (ENSVVUG00000010554) #26	ACSS3 (ENSVVUG00000010570) #28	PPFIA2 (ENSVVUG00000010745) #30	ENSVVUG00000010950	CCDC59 (ENSVVUG00000010954) #32	METTL25 (ENSVVUG00000010971) #33	TMTC2 (ENSVVUG00000011020) #35	SLC6A15 (ENSVVUG00000011094)	ENSVVUG00000011115	TSPAN19 (ENSVVUG00000011198)	LRRIQ1 (ENSVVUG00000011218)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Panthera	ANCESTRAL SPECIES		ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000263748	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
lion	MODERN SPECIES	7	GLIPR1L2 (ENSPLOG00000001854)	GLIPR1 (ENSPLOG00000001884)	KRR1 (ENSPLOG00000001901)	PHLDA1 (ENSPLOG00000001933)	NAP1L1 (ENSPLOG00000001982)	BBS10 (ENSPLOG00000002053)	OSBPL8 (ENSPLOG00000002092)	ZDHHC17 (ENSPLOG00000002249) #7	CSRP2 (ENSPLOG00000002279) #8	E2F7 (ENSPLOG00000002314) #10	NAV3 (ENSPLOG00000002454) #14	ENSPLOG00000002650	SYT1 (ENSPLOG00000002662) #18	PAWR (ENSPLOG00000002686) #19	PPP1R12A (ENSPLOG00000002780) #21	OTOGL (ENSPLOG00000003151) #22	PTPRQ (ENSPLOG00000003543) #23	MYF6 (ENSPLOG00000003667) #24	MYF5 (ENSPLOG00000003675) #25	LIN7A (ENSPLOG00000003686) #26	ACSS3 (ENSPLOG00000003703) #28	PPFIA2 (ENSPLOG00000003973) #30	CCDC59 (ENSPLOG00000004335) #32	METTL25 (ENSPLOG00000004346) #33	TMTC2 (ENSPLOG00000004411) #35	SLC6A15 (ENSPLOG00000004444)	TSPAN19 (ENSPLOG00000004469)	ENSPLOG00000004490	ALX1 (ENSPLOG00000004563)	RASSF9 (ENSPLOG00000004571)	NTS (ENSPLOG00000004580)
leopard	MODERN SPECIES	27	KRR1 (ENSPPRG00000002897)	ENSPPRG00000002277	NAP1L1 (ENSPPRG00000001906)	ENSPPRG00000000117	BBS10 (ENSPPRG00000022774)	OSBPL8 (ENSPPRG00000023047)	ENSPPRG00000023878	ZDHHC17 (ENSPPRG00000024071) #7	CSRP2 (ENSPPRG00000024205) #8	E2F7 (ENSPPRG00000024442) #10	NAV3 (ENSPPRG00000022007) #14	SYT1 (ENSPPRG00000014210) #18	PAWR (ENSPPRG00000013959) #19	ENSPPRG00000013642	PPP1R12A (ENSPPRG00000012756) #21	OTOGL (ENSPPRG00000007761) #22	PTPRQ (ENSPPRG00000005300) #23	MYF6 (ENSPPRG00000003909) #24	MYF5 (ENSPPRG00000003820) #25	LIN7A (ENSPPRG00000003439) #26	ACSS3 (ENSPPRG00000003248) #28	PPFIA2 (ENSPPRG00000001816) #30	ENSPPRG00000024977	CCDC59 (ENSPPRG00000022500) #32	METTL25 (ENSPPRG00000020885) #33	TMTC2 (ENSPPRG00000018820) #35
Tiger	MODERN SPECIES	285	CAPS2 (ENSPTIG00000012593)	GLIPR1L1 (ENSPTIG00000011807)	GLIPR1L2 (ENSPTIG00000011160)	GLIPR1 (ENSPTIG00000010519)	KRR1 (ENSPTIG00000009202)	NAP1L1 (ENSPTIG00000003186)	BBS10 (ENSPTIG00000020383)	OSBPL8 (ENSPTIG00000019983)	ZDHHC17 (ENSPTIG00000019755) #7	CSRP2 (ENSPTIG00000019308) #8	E2F7 (ENSPTIG00000016920) #10	NAV3 (ENSPTIG00000013673) #14	SYT1 (ENSPTIG00000013094) #18	PAWR (ENSPTIG00000012722) #19	PPP1R12A (ENSPTIG00000003820) #21	OTOGL (ENSPTIG00000017536) #22	PTPRQ (ENSPTIG00000014182) #23	MYF6 (ENSPTIG00000014009) #24	MYF5 (ENSPTIG00000013849) #25	LIN7A (ENSPTIG00000013465) #26	ACSS3 (ENSPTIG00000013083) #28	PPFIA2 (ENSPTIG00000008257) #30
Cat	MODERN SPECIES	238	GLIPR1L2 (ENSFCAG00000036590)	GLIPR1 (ENSFCAG00000005203)	KRR1 (ENSFCAG00000025788)	ENSFCAG00000050261	PHLDA1 (ENSFCAG00000032023)	NAP1L1 (ENSFCAG00000000279)	OSBPL8 (ENSFCAG00000027470)	ZDHHC17 (ENSFCAG00000027034) #7	CSRP2 (ENSFCAG00000006548) #8	E2F7 (ENSFCAG00000010756) #10	NAV3 (ENSFCAG00000013128) #14	ENSFCAG00000048215	SYT1 (ENSFCAG00000024865) #18	PAWR (ENSFCAG00000026300) #19	PPP1R12A (ENSFCAG00000027965) #21	OTOGL (ENSFCAG00000022141) #22	PTPRQ (ENSFCAG00000026313) #23	MYF6 (ENSFCAG00000015010) #24	MYF5 (ENSFCAG00000015011) #25	LIN7A (ENSFCAG00000015014) #26	ACSS3 (ENSFCAG00000012992) #28	PPFIA2 (ENSFCAG00000012993) #30	CCDC59 (ENSFCAG00000028462) #32	METTL25 (ENSFCAG00000013377) #33	ENSFCAG00000035513	TMTC2 (ENSFCAG00000024338) #35	SLC6A15 (ENSFCAG00000029283)	TSPAN19 (ENSFCAG00000025693)	LRRIQ1 (ENSFCAG00000031743)	ALX1 (ENSFCAG00000034933)	RASSF9 (ENSFCAG00000006978)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Equus	ANCESTRAL SPECIES	21	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Donkey	MODERN SPECIES	11	GLIPR1L1 (ENSEASG00005032803)	GLIPR1L2 (ENSEASG00005021956)	GLIPR1 (ENSEASG00005024066)	KRR1 (ENSEASG00005021952)	PHLDA1 (ENSEASG00005027836)	NAP1L1 (ENSEASG00005021946)	BBS10 (ENSEASG00005021945)	OSBPL8 (ENSEASG00005021942)	ZDHHC17 (ENSEASG00005021939) #7	ENSEASG00005021936 #8	E2F7 (ENSEASG00005021935) #10	NAV3 (ENSEASG00005021551) #14	SYT1 (ENSEASG00005021375) #18	PAWR (ENSEASG00005033077) #19	PPP1R12A (ENSEASG00005021353) #21	OTOGL (ENSEASG00005021304) #22	PTPRQ (ENSEASG00005021271) #23	MYF6 (ENSEASG00005021268) #24	MYF5 (ENSEASG00005021266) #25	LIN7A (ENSEASG00005021265) #26	ENSEASG00005024557	ACSS3 (ENSEASG00005021261) #28	PPFIA2 (ENSEASG00005021241) #30	ENSEASG00005011113	CCDC59 (ENSEASG00005021237) #32	METTL25 (ENSEASG00005021236) #33	TMTC2 (ENSEASG00005021228) #35	SLC6A15 (ENSEASG00005021226)	TSPAN19 (ENSEASG00005021223)	LRRIQ1 (ENSEASG00005021215)	ALX1 (ENSEASG00005021209)
Horse	MODERN SPECIES	20	ENSECAG00000054232	GLIPR1 (ENSECAG00000015687)	KRR1 (ENSECAG00000017498)	ENSECAG00000001900	NAP1L1 (ENSECAG00000000066)	BBS10 (ENSECAG00000015525)	OSBPL8 (ENSECAG00000015542)	ENSECAG00000058140	ZDHHC17 (ENSECAG00000006626) #7	CSRP2 (ENSECAG00000015606) #8	E2F7 (ENSECAG00000017963) #10	NAV3 (ENSECAG00000000121) #14	SYT1 (ENSECAG00000012832) #18	PAWR (ENSECAG00000019505) #19	PPP1R12A (ENSECAG00000020406) #21	OTOGL (ENSECAG00000009954) #22	PTPRQ (ENSECAG00000013221) #23	MYF5 (ENSECAG00000020047) #24	LIN7A (ENSECAG00000002823) #26	ACSS3 (ENSECAG00000008242) #28	PPFIA2 (ENSECAG00000011682) #30	CCDC59 (ENSECAG00000010450) #32	METTL25 (ENSECAG00000010894) #33	TMTC2 (ENSECAG00000014638) #35	SLC6A15 (ENSECAG00000018897)	TSPAN19 (ENSECAG00000037294)	LRRIQ1 (ENSECAG00000007701)	ALX1 (ENSECAG00000008597)	RASSF9 (ENSECAG00000002601)	NTS (ENSECAG00000010879)	MGAT4C (ENSECAG00000011971)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00940000167051	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00940000167051	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980.cb #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Greater horseshoe bat	MODERN SPECIES	1	GLIPR1L1 (ENSRFEG00010004502)	GLIPR1L2 (ENSRFEG00010004536)	GLIPR1 (ENSRFEG00010004575)	ENSRFEG00010004593	ENSRFEG00010004601	NAP1L1 (ENSRFEG00010004645)	BBS10 (ENSRFEG00010004681)	OSBPL8 (ENSRFEG00010006253)	ZDHHC17 (ENSRFEG00010006316) #7	CSRP2 (ENSRFEG00010006389) #8	E2F7 (ENSRFEG00010006442) #10	NAV3 (ENSRFEG00010006668) #14	SYT1 (ENSRFEG00010007403) #18	PAWR (ENSRFEG00010007574) #19	PPP1R12A (ENSRFEG00010007686) #21	OTOGL (ENSRFEG00010007970) #22	PTPRQ (ENSRFEG00010009562) #23	MYF6 (ENSRFEG00010010368) #24	MYF5 (ENSRFEG00010010395) #25	LIN7A (ENSRFEG00010010463) #26	ACSS3 (ENSRFEG00010010509) #28	PPFIA2 (ENSRFEG00010011014) #30	CCDC59 (ENSRFEG00010014412) #32	METTL25 (ENSRFEG00010014462) #33	TMTC2 (ENSRFEG00010014525) #35	ENSRFEG00010014611	SLC6A15 (ENSRFEG00010014671)	TSPAN19 (ENSRFEG00010014831)	LRRIQ1 (ENSRFEG00010014978)	ALX1 (ENSRFEG00010015730)	RASSF9 (ENSRFEG00010015800)
Microbat	MODERN SPECIES	946			NAP1L1 (ENSMLUG00000029307)	BBS10 (ENSMLUG00000001850)	OSBPL8 (ENSMLUG00000005046)	ENSMLUG00000029930	ENSMLUG00000003587	ZDHHC17 (ENSMLUG00000002375) #7	CSRP2 (ENSMLUG00000002384) #8	E2F7 (ENSMLUG00000012116) #10	NAV3 (ENSMLUG00000010374) #14	ENSMLUG00000027140	SYT1 (ENSMLUG00000005752) #18	ENSMLUG00000005757 #19	PPP1R12A (ENSMLUG00000005477) #21	OTOGL (ENSMLUG00000005553) #22	PTPRQ (ENSMLUG00000006091) #23	MYF6 (ENSMLUG00000004940) #24	MYF5 (ENSMLUG00000004943) #25	LIN7A (ENSMLUG00000001526) #26	ACSS3 (ENSMLUG00000001527) #28	PPFIA2 (ENSMLUG00000001537) #30	CCDC59 (ENSMLUG00000008071) #32	METTL25 (ENSMLUG00000008084) #33	TMTC2 (ENSMLUG00000010233) #35	SLC6A15 (ENSMLUG00000011461)	TSPAN19 (ENSMLUG00000030562)	ALX1 (ENSMLUG00000008586)	RASSF9 (ENSMLUG00000008746)	NTS (ENSMLUG00000008733)	ENSMLUG00000022318
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00940000162547	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00940000159670	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00940000159670	ENSGT00940000162357	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Elephant	MODERN SPECIES	196	GLIPR1L2 (ENSLAFG00000006750)	GLIPR1 (ENSLAFG00000031551)	KRR1 (ENSLAFG00000015986)	ENSLAFG00000008030	NAP1L1 (ENSLAFG00000005711)	BBS10 (ENSLAFG00000009397)	OSBPL8 (ENSLAFG00000009398)	ZDHHC17 (ENSLAFG00000006732) #7	CSRP2 (ENSLAFG00000006735) #8	ENSLAFG00000028909	E2F7 (ENSLAFG00000017902) #10	NAV3 (ENSLAFG00000001793) #14	SYT1 (ENSLAFG00000013359) #18	ENSLAFG00000007186 #19	PPP1R12A (ENSLAFG00000014619) #21	ENSLAFG00000016020 #22	PTPRQ (ENSLAFG00000009382) #23	MYF6 (ENSLAFG00000016476) #24	MYF5 (ENSLAFG00000016473) #25	LIN7A (ENSLAFG00000014801) #26	ACSS3 (ENSLAFG00000011051) #28	PPFIA2 (ENSLAFG00000011055) #30	CCDC59 (ENSLAFG00000015368) #32	METTL25 (ENSLAFG00000015370) #33	TMTC2 (ENSLAFG00000018670) #35	ENSLAFG00000029547	SLC6A15 (ENSLAFG00000006073)	ENSLAFG00000020855	ALX1 (ENSLAFG00000013544)	RASSF9 (ENSLAFG00000028247)	NTS (ENSLAFG00000005894)
Xenarthra	ANCESTRAL SPECIES	724																ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30
Armadillo	MODERN SPECIES	1911																OTOGL (ENSDNOG00000036627) #22	PTPRQ (ENSDNOG00000031827) #23	MYF6 (ENSDNOG00000019387) #24	MYF5 (ENSDNOG00000034747) #25	LIN7A (ENSDNOG00000024299) #26	ACSS3 (ENSDNOG00000015337) #28	PPFIA2 (ENSDNOG00000015350) #30
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000162547	ENSGT00940000162357.b	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.k	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000162547	ENSGT00940000162357.b	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.k	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000162547	ENSGT00940000162357.b	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.k	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000162547	ENSGT00940000162357.b	ENSGT00940000160727	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a.k	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000162858	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574	ENSGT00940000155352
koala	MODERN SPECIES	51								ZDHHC17 (ENSPCIG00000005890) #7	CSRP2 (ENSPCIG00000005894) #8	E2F7 (ENSPCIG00000025823) #10	NAV3 (ENSPCIG00000025666) #14	ENSPCIG00000026362	SYT1 (ENSPCIG00000032719) #18	PAWR (ENSPCIG00000026365) #19	PPP1R12A (ENSPCIG00000026366) #21	OTOGL (ENSPCIG00000026368) #22	PTPRQ (ENSPCIG00000029148) #23	MYF6 (ENSPCIG00000029149) #24	MYF5 (ENSPCIG00000029150) #25	LIN7A (ENSPCIG00000029151) #26	ACSS3 (ENSPCIG00000035215) #28	PPFIA2 (ENSPCIG00000024777) #30	CCDC59 (ENSPCIG00000007808) #32	METTL25 (ENSPCIG00000007809) #33	TMTC2 (ENSPCIG00000032378) #35	ENSPCIG00000011311	SLC6A15 (ENSPCIG00000027156)	ENSPCIG00000009153	ALX1 (ENSPCIG00000021266)	RASSF9 (ENSPCIG00000002684)	NTS (ENSPCIG00000009584)
Common wonbat	MODERN SPECIES	1095	ENSVURG00010002166	ENSVURG00010002140	OSBPL8 (ENSVURG00010002089)	ZDHHC17 (ENSVURG00010002037) #7	CSRP2 (ENSVURG00010002008) #8	E2F7 (ENSVURG00010001992) #10	ENSVURG00010001969	ENSVURG00010001942	ENSVURG00010001934	NAV3 (ENSVURG00010001745) #14	ENSVURG00010001638	ENSVURG00010001581	SYT1 (ENSVURG00010001565) #18	PAWR (ENSVURG00010001479) #19	PPP1R12A (ENSVURG00010001421) #21	OTOGL (ENSVURG00010001281) #22	PTPRQ (ENSVURG00010001162) #23	MYF6 (ENSVURG00010001122) #24	MYF5 (ENSVURG00010001088) #25	LIN7A (ENSVURG00010001078) #26	ACSS3 (ENSVURG00010000986) #28	PPFIA2 (ENSVURG00010000931) #30	CCDC59 (ENSVURG00010000865) #32	METTL25 (ENSVURG00010000829) #33	TMTC2 (ENSVURG00010000692) #35	ENSVURG00010000644	ENSVURG00010000614 ##34	ENSVURG00010000610	SLC6A15 (ENSVURG00010000556)	ENSVURG00010000506	ALX1 (ENSVURG00010000474)
Wallaby	MODERN SPECIES	7271																ENSMEUG00000010492 #22
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000022579	ENSSHAG00000003351	ENSSHAG00000000387	KRR1 (ENSSHAG00000001646)	ENSSHAG00000031318	NAP1L1 (ENSSHAG00000002304)	BBS10 (ENSSHAG00000001800)	OSBPL8 (ENSSHAG00000023268)	ZDHHC17 (ENSSHAG00000022371) #7	CSRP2 (ENSSHAG00000005571) #8	E2F7 (ENSSHAG00000002919) #10	NAV3 (ENSSHAG00000001971) #14	SYT1 (ENSSHAG00000009436) #18	ENSSHAG00000022708 #19	PPP1R12A (ENSSHAG00000005280) #21	OTOGL (ENSSHAG00000010191) #22	PTPRQ (ENSSHAG00000022062) #23	MYF6 (ENSSHAG00000013331) #24	MYF5 (ENSSHAG00000013391) #25	LIN7A (ENSSHAG00000029974) #26	ENSSHAG00000025569 #34	ACSS3 (ENSSHAG00000005298) #28	PPFIA2 (ENSSHAG00000007734) #30	ENSSHAG00000032226 #34	CCDC59 (ENSSHAG00000031706) #32	METTL25 (ENSSHAG00000007147) #33	ENSSHAG00000030042	TMTC2 (ENSSHAG00000031167) #35	SLC6A15 (ENSSHAG00000003371)	ENSSHAG00000031034	ALX1 (ENSSHAG00000010658)
Opossum	MODERN SPECIES	7	ENSMODG00000037882	GLIPR1 (ENSMODG00000020450)	KRR1 (ENSMODG00000020451)	ENSMODG00000044376	ENSMODG00000020456	ENSMODG00000020458	OSBPL8 (ENSMODG00000020459)	ENSMODG00000048422 #7	ENSMODG00000020464 #8	E2F7 (ENSMODG00000020465) #10	NAV3 (ENSMODG00000020466) #14	SYT1 (ENSMODG00000020467) #18	PAWR (ENSMODG00000020468) #19	PPP1R12A (ENSMODG00000020471) #21	ENSMODG00000025012	OTOGL (ENSMODG00000020473) #22	PTPRQ (ENSMODG00000020476) #23	MYF6 (ENSMODG00000039074) #24	MYF5 (ENSMODG00000020478) #25	LIN7A (ENSMODG00000020479) #26	ENSMODG00000037278 ##34	ACSS3 (ENSMODG00000020480) #28	ENSMODG00000020481 #30	ENSMODG00000020484 #32	METTL25 (ENSMODG00000020485) #33	TMTC2 (ENSMODG00000020487) #35	ENSMODG00000020488	SLC6A15 (ENSMODG00000020492)	ALX1 (ENSMODG00000020494)	ENSMODG00000041685	RASSF9 (ENSMODG00000020496)
Platypus	MODERN SPECIES	5	CAPS2 (ENSOANG00000029950)	ENSOANG00000022184	ENSOANG00000012140	KRR1 (ENSOANG00000014451)	ENSOANG00000047378	ENSOANG00000004688	ENSOANG00000037830	OSBPL8 (ENSOANG00000011301)	ZDHHC17 (ENSOANG00000047613) #7	CSRP2 (ENSOANG00000007447) #8	E2F7 (ENSOANG00000007450) #10	NAV3 (ENSOANG00000007451) #14	SYT1 (ENSOANG00000007531) #18	PAWR (ENSOANG00000043356) #19	PPP1R12A (ENSOANG00000001685) #21	OTOGL (ENSOANG00000004859) #22	PTPRQ (ENSOANG00000004855) #23	MYF6 (ENSOANG00000004854) #24	MYF5 (ENSOANG00000004853) #25	ENSOANG00000041857 #26	ACSS3 (ENSOANG00000004851) #28	PPFIA2 (ENSOANG00000004850) #30	ENSOANG00000042867 #32	ENSOANG00000004849 #33	TMTC2 (ENSOANG00000015210) #35	SLC6A15 (ENSOANG00000006324)	ENSOANG00000050599	ENSOANG00000006648	ALX1 (ENSOANG00000006647)	RASSF9 (ENSOANG00000006646)	NTS (ENSOANG00000006645)
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Aves	ANCESTRAL SPECIES	1	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Neognathae	ANCESTRAL SPECIES	3	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Anatidae	ANCESTRAL SPECIES	14	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT01100000267073	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Pink-footed goose	MODERN SPECIES	36	ENSABRG00000002091	KRR1 (ENSABRG00000002114)	PHLDA1 (ENSABRG00000002143)	NAP1L1 (ENSABRG00000002153)	BBS10 (ENSABRG00000002187)	OSBPL8 (ENSABRG00000002275)	ZDHHC17 (ENSABRG00000002383) #7	CSRP2 (ENSABRG00000002441) #8	E2F7 (ENSABRG00000002456) #10	NAV3 (ENSABRG00000002539) #14	ENSABRG00000002691	SYT1 (ENSABRG00000002806) #18	PAWR (ENSABRG00000002832) #19	PPP1R12A (ENSABRG00000002856) #21	RPS16 (ENSABRG00000002997)	OTOGL (ENSABRG00000003060) #22	PTPRQ (ENSABRG00000003711) #23	MYF6 (ENSABRG00000003882) #24	MYF5 (ENSABRG00000003896) #25	LIN7A (ENSABRG00000003928) #26	ENSABRG00000003943 #28	ENSABRG00000003973 ##30	CHADL (ENSABRG00000003979)	RANGAP1 (ENSABRG00000004047)	ZC3H7B (ENSABRG00000004538)	TEF (ENSABRG00000004576)	TOB2 (ENSABRG00000004605)	PHF5A (ENSABRG00000004614)	ACO2 (ENSABRG00000004640)	POLR3H (ENSABRG00000004688)	CSDC2 (ENSABRG00000004705)
Duck	MODERN SPECIES		ENSAPLG00000020051	ENSAPLG00000011934	KRR1 (ENSAPLG00000016378)	PHLDA1 (ENSAPLG00000002044)	NAP1L1 (ENSAPLG00000016178)	OSBPL8 (ENSAPLG00000016005)	ZDHHC17 (ENSAPLG00000014034) #7	ENSAPLG00000014346	E2F7 (ENSAPLG00000014506) #10	NAV3 (ENSAPLG00000014672) #14	ENSAPLG00000029309	SYT1 (ENSAPLG00000014912) #18	PAWR (ENSAPLG00000027740) #19	PPP1R12A (ENSAPLG00000015197) #21	RPS16 (ENSAPLG00000015907)	OTOGL (ENSAPLG00000015946) #22	ENSAPLG00000019979	PTPRQ (ENSAPLG00000016187) #23	MYF6 (ENSAPLG00000002254) #24	MYF5 (ENSAPLG00000001124) #25	ENSAPLG00000001136 #26	LIN7A (ENSAPLG00000017756) #26	ENSAPLG00000029393	RANGAP1 (ENSAPLG00000006767)	ZC3H7B (ENSAPLG00000005880)	TEF (ENSAPLG00000005838)	TOB2 (ENSAPLG00000023708)	PHF5A (ENSAPLG00000021195)	ACO2 (ENSAPLG00000005198)	POLR3H (ENSAPLG00000005063)	CSDC2 (ENSAPLG00000005057)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Chicken	MODERN SPECIES		GLIPR1 (ENSGALG00010012924)	GLIPR1L (ENSGALG00010012966)	KRR1 (ENSGALG00010012975)	PHLDA1 (ENSGALG00010014238)	NAP1L1 (ENSGALG00010013389)	BBS10 (ENSGALG00010013400)	OSBPL8 (ENSGALG00010013444)	ZDHHC17 (ENSGALG00010013476) #7	CSRP2 (ENSGALG00010013516) #8	E2F7 (ENSGALG00010013538) #10	NAV3 (ENSGALG00010013648) #14	SYT1 (ENSGALG00010012026) #18	PAWR (ENSGALG00010013283) #19	PPP1R12A (ENSGALG00010013333) #21	RPS16 (ENSGALG00010013358)	OTOGL (ENSGALG00010013364) #22	PTPRQ (ENSGALG00010012230) #23	MYF6 (ENSGALG00010012253) #24	MYF5 (ENSGALG00010012264) #25	ENSGALG00010012271 #26	ENSGALG00010014881 #26	ACSS3 (ENSGALG00010012337) #28	PPFIA2 (ENSGALG00010012450) #30	ENSGALG00010013569	CCDC59 (ENSGALG00010010017) #32	METTL25 (ENSGALG00010010042) #33	TMTC2 (ENSGALG00010011067) #35	SLC6A15 (ENSGALG00010011117)	TSPAN19 (ENSGALG00010011168)	ENSGALG00010011199	ALX1 (ENSGALG00010011243)
Turkey	MODERN SPECIES		ENSMGAG00000010832	ENSMGAG00000010833	ENSMGAG00000010839	KRR1 (ENSMGAG00000010844)	ENSMGAG00000010856	NAP1L1 (ENSMGAG00000010858)	OSBPL8 (ENSMGAG00000010890)	ZDHHC17 (ENSMGAG00000010911) #7	CSRP2 (ENSMGAG00000010931) #8	E2F7 (ENSMGAG00000010943) #10	NAV3 (ENSMGAG00000010956) #14	SYT1 (ENSMGAG00000011006) #18	PAWR (ENSMGAG00000011010) #19	PPP1R12A (ENSMGAG00000011011) #21	ENSMGAG00000011060	OTOGL (ENSMGAG00000011065) #22	PTPRQ (ENSMGAG00000011081) #23	ENSMGAG00000018753	MYF6 (ENSMGAG00000011091) #24	LIN7A (ENSMGAG00000011093) #26	ACSS3 (ENSMGAG00000011096) #28	ENSMGAG00000011103 #30	SLC6A15 (ENSMGAG00000011123)	TSPAN19 (ENSMGAG00000017647)	ENSMGAG00000011134	ALX1 (ENSMGAG00000011132)	RASSF9 (ENSMGAG00000011136)	NTS (ENSMGAG00000011142)	MGAT4C (ENSMGAG00000011146)	ENSMGAG00000015695	C12orf29 (ENSMGAG00000011149)
Japanese quail	MODERN SPECIES		ENSCJPG00005016145	KRR1 (ENSCJPG00005016146)	PHLDA1 (ENSCJPG00005016153)	NAP1L1 (ENSCJPG00005016162)	BBS10 (ENSCJPG00005016163)	OSBPL8 (ENSCJPG00005016164)	ZDHHC17 (ENSCJPG00005016170) #7	CSRP2 (ENSCJPG00005016171) #8	E2F7 (ENSCJPG00005016173) #10	ENSCJPG00005016175	NAV3 (ENSCJPG00005016185) #14	SYT1 (ENSCJPG00005016211) #18	PAWR (ENSCJPG00005016216) #19	PPP1R12A (ENSCJPG00005016217) #21	RPS16 (ENSCJPG00005000776)	OTOGL (ENSCJPG00005000816) #22	PTPRQ (ENSCJPG00005001013) #23	MYF6 (ENSCJPG00005001103) #24	MYF5 (ENSCJPG00005001107) #25	LIN7A (ENSCJPG00005001112) #26	ACSS3 (ENSCJPG00005001150) #28	PPFIA2 (ENSCJPG00005001332) #30	CCDC59 (ENSCJPG00005004695) #32	METTL25 (ENSCJPG00005004697) #33	TMTC2 (ENSCJPG00005004705) #35	SLC6A15 (ENSCJPG00005004747)	ENSCJPG00005004764	ALX1 (ENSCJPG00005004774)	RASSF9 (ENSCJPG00005004777)	NTS (ENSCJPG00005004778)	MGAT4C (ENSCJPG00005004780)
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Golden eagle	MODERN SPECIES	18	ENSACCG00020011297	ENSACCG00020011291	KRR1 (ENSACCG00020011277)	PHLDA1 (ENSACCG00020011262)	NAP1L1 (ENSACCG00020011243)	BBS10 (ENSACCG00020011231)	OSBPL8 (ENSACCG00020011213)	ZDHHC17 (ENSACCG00020011189) #7	CSRP2 (ENSACCG00020011176) #8	E2F7 (ENSACCG00020011147) #10	NAV3 (ENSACCG00020011091) #14	SYT1 (ENSACCG00020011033) #18	PAWR (ENSACCG00020011015) #19	PPP1R12A (ENSACCG00020010939) #21	RPS16 (ENSACCG00020010874)	OTOGL (ENSACCG00020010835) #22	ENSACCG00020010786	PTPRQ (ENSACCG00020010748) #23	MYF6 (ENSACCG00020010717) #24	MYF5 (ENSACCG00020010710) #25	LIN7A (ENSACCG00020010701) #26	ACSS3 (ENSACCG00020010468) #28	PPFIA2 (ENSACCG00020010168) #30	ENSACCG00020010123	CCDC59 (ENSACCG00020010109) #32	ENSACCG00020016084	METTL25 (ENSACCG00020016068) #33	TMTC2 (ENSACCG00020016051) #35	ENSACCG00020016040	SLC6A15 (ENSACCG00020016027)	TSPAN19 (ENSACCG00020016013)
Kakapo	MODERN SPECIES	20	KRR1 (ENSSHBG00005003376)	PHLDA1 (ENSSHBG00005003397)	NAP1L1 (ENSSHBG00005003406)	BBS10 (ENSSHBG00005003419)	ENSSHBG00005003428	OSBPL8 (ENSSHBG00005003509)	ZDHHC17 (ENSSHBG00005003761) #7	CSRP2 (ENSSHBG00005003817) #8	E2F7 (ENSSHBG00005003861) #10	NAV3 (ENSSHBG00005004247) #14	ENSSHBG00005004847	SYT1 (ENSSHBG00005004867) #18	PAWR (ENSSHBG00005004872) #19	PPP1R12A (ENSSHBG00005004881) #21	RPS16 (ENSSHBG00005004902)	OTOGL (ENSSHBG00005004951) #22	ENSSHBG00005004998	PTPRQ (ENSSHBG00005005034) #23	MYF6 (ENSSHBG00005005072) #24	MYF5 (ENSSHBG00005005076) #25	LIN7A (ENSSHBG00005005088) #26	ACSS3 (ENSSHBG00005005107) #28	PPFIA2 (ENSSHBG00005005123) #30	CCDC59 (ENSSHBG00005005147) #32	METTL25 (ENSSHBG00005005155) #33	TMTC2 (ENSSHBG00005005167) #35	SLC6A15 (ENSSHBG00005005181)	TSPAN19 (ENSSHBG00005005237)	ENSSHBG00005005257	ALX1 (ENSSHBG00005005283)	ENSSHBG00005005293
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Great tit	MODERN SPECIES	10	ENSPMJG00000012647	ENSPMJG00000012648	KRR1 (ENSPMJG00000012649)	PHLDA1 (ENSPMJG00000012650)	NAP1L1 (ENSPMJG00000012651)	OSBPL8 (ENSPMJG00000012652)	ZDHHC17 (ENSPMJG00000012653) #7	CSRP2 (ENSPMJG00000012654) #8	E2F7 (ENSPMJG00000012655) #10	NAV3 (ENSPMJG00000012656) #14	SYT1 (ENSPMJG00000012662) #18	ENSPMJG00000012663	PAWR (ENSPMJG00000012664) #19	PPP1R12A (ENSPMJG00000012665) #21	RPS16 (ENSPMJG00000012667)	OTOGL (ENSPMJG00000012668) #22	ENSPMJG00000012669	PTPRQ (ENSPMJG00000012670) #23	MYF6 (ENSPMJG00000012671) #24	MYF5 (ENSPMJG00000012672) #25	LIN7A (ENSPMJG00000012673) #26	ACSS3 (ENSPMJG00000012674) #28	PPFIA2 (ENSPMJG00000012675) #30	CCDC59 (ENSPMJG00000012676) #32	METTL25 (ENSPMJG00000012677) #33	TMTC2 (ENSPMJG00000012678) #35	SLC6A15 (ENSPMJG00000012682)	ENSPMJG00000012685	ALX1 (ENSPMJG00000012686)	RASSF9 (ENSPMJG00000012688)	NTS (ENSPMJG00000012689)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Medium ground finch	MODERN SPECIES	13	KCNC2 (ENSGFOG00000005392)	ENSGFOG00000005379	ENSGFOG00000005369	ENSGFOG00000005356	ENSGFOG00000005348	KRR1 (ENSGFOG00000005331)	NAP1L1 (ENSGFOG00000005292)	OSBPL8 (ENSGFOG00000005268)	ZDHHC17 (ENSGFOG00000005185) #7	CSRP2 (ENSGFOG00000005156) #8	E2F7 (ENSGFOG00000005143) #10	NAV3 (ENSGFOG00000005066) #14	SYT1 (ENSGFOG00000005048) #18	PPP1R12A (ENSGFOG00000005009) #21	RPS16 (ENSGFOG00000004986)	OTOGL (ENSGFOG00000004777) #22	PTPRQ (ENSGFOG00000004653) #23	MYF6 (ENSGFOG00000004628) #24	MYF5 (ENSGFOG00000004624) #25	LIN7A (ENSGFOG00000004616) #26	ACSS3 (ENSGFOG00000004536) #28	ENSGFOG00000000855 #30	CCDC59 (ENSGFOG00000000604) #32	METTL25 (ENSGFOG00000000588) #33	TMTC2 (ENSGFOG00000000573) #35
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Zebra finch	MODERN SPECIES	11	ENSTGUG00000007373	ENSTGUG00000007376	KRR1 (ENSTGUG00000007385)	PHLDA1 (ENSTGUG00000018888)	NAP1L1 (ENSTGUG00000007412)	BBS10 (ENSTGUG00000007444)	OSBPL8 (ENSTGUG00000007445)	ZDHHC17 (ENSTGUG00000007477) #7	CSRP2 (ENSTGUG00000028299) #8	E2F7 (ENSTGUG00000007515) #10	NAV3 (ENSTGUG00000007519) #14	SYT1 (ENSTGUG00000007572) #18	PAWR (ENSTGUG00000020006) #19	PPP1R12A (ENSTGUG00000007603) #21	RPS16 (ENSTGUG00000007667)	OTOGL (ENSTGUG00000007680) #22	ENSTGUG00000023557	PTPRQ (ENSTGUG00000007720) #23	MYF6 (ENSTGUG00000007751) #24	MYF5 (ENSTGUG00000007755) #25	LIN7A (ENSTGUG00000007757) #26	ACSS3 (ENSTGUG00000007763) #28	PPFIA2 (ENSTGUG00000007778) #30	CCDC59 (ENSTGUG00000007835) #32	METTL25 (ENSTGUG00000007841) #33	TMTC2 (ENSTGUG00000007855) #35	SLC6A15 (ENSTGUG00000007865)	ENSTGUG00000007889	ALX1 (ENSTGUG00000007899)	RASSF9 (ENSTGUG00000007908)	NTS (ENSTGUG00000027877)
Common canary	MODERN SPECIES	6	ENSSCAG00000008881	ENSSCAG00000008874	KRR1 (ENSSCAG00000008870)	PHLDA1 (ENSSCAG00000008868)	NAP1L1 (ENSSCAG00000008861)	OSBPL8 (ENSSCAG00000008836)	ZDHHC17 (ENSSCAG00000008792) #7	CSRP2 (ENSSCAG00000008783) #8	E2F7 (ENSSCAG00000008773) #10	ENSSCAG00000008755 #14	ENSSCAG00000008738 #14	SYT1 (ENSSCAG00000008697) #18	PAWR (ENSSCAG00000008657) #19	PPP1R12A (ENSSCAG00000008580) #21	RPS16 (ENSSCAG00000008547)	OTOGL (ENSSCAG00000008492) #22	ENSSCAG00000008481	PTPRQ (ENSSCAG00000008462) #23	MYF6 (ENSSCAG00000008454) #24	MYF5 (ENSSCAG00000008451) #25	LIN7A (ENSSCAG00000008443) #26	ACSS3 (ENSSCAG00000008416) #28	PPFIA2 (ENSSCAG00000008164) #30	CCDC59 (ENSSCAG00000008055) #32	METTL25 (ENSSCAG00000007930) #33	MGAT4C (ENSSCAG00000007907)	NTS (ENSSCAG00000007904)	RASSF9 (ENSSCAG00000007901)	ALX1 (ENSSCAG00000007890)	ENSSCAG00000007880	SLC6A15 (ENSSCAG00000007869)
Flycatcher	MODERN SPECIES	10	ENSFALG00000024791	ENSFALG00000029079	ENSFALG00000010384	ENSFALG00000010390	KRR1 (ENSFALG00000010395)	PHLDA1 (ENSFALG00000014745)	NAP1L1 (ENSFALG00000010403)	OSBPL8 (ENSFALG00000010404)	ZDHHC17 (ENSFALG00000010415) #7	CSRP2 (ENSFALG00000010426) #8	E2F7 (ENSFALG00000010433) #10	NAV3 (ENSFALG00000010449) #14	SYT1 (ENSFALG00000010476) #18	PPP1R12A (ENSFALG00000010487) #21	ENSFALG00000028909	OTOGL (ENSFALG00000010495) #22	ENSFALG00000026391	PTPRQ (ENSFALG00000010498) #23	MYF6 (ENSFALG00000010503) #24	MYF5 (ENSFALG00000010507) #25	LIN7A (ENSFALG00000010511) #26	ACSS3 (ENSFALG00000010517) #28	PPFIA2 (ENSFALG00000010521) #30	CCDC59 (ENSFALG00000010525) #32	METTL25 (ENSFALG00000010529) #33	TMTC2 (ENSFALG00000010537) #35	SLC6A15 (ENSFALG00000010541)	ENSFALG00000028693	ALX1 (ENSFALG00000010547)	RASSF9 (ENSFALG00000027104)	NTS (ENSFALG00000025234)
African ostrich	MODERN SPECIES	426	ENSSCUG00000009194	ENSSCUG00000009192	ENSSCUG00000009190	ENSSCUG00000009187	KRR1 (ENSSCUG00000009184)	NAP1L1 (ENSSCUG00000009180)	OSBPL8 (ENSSCUG00000009164)	ZDHHC17 (ENSSCUG00000009151) #7	CSRP2 (ENSSCUG00000009147) #8	E2F7 (ENSSCUG00000009145) #10	ENSSCUG00000009143	NAV3 (ENSSCUG00000009108) #14	SYT1 (ENSSCUG00000009090) #18	PPP1R12A (ENSSCUG00000009087) #21	RPS16 (ENSSCUG00000009078)	OTOGL (ENSSCUG00000009047) #22	PTPRQ (ENSSCUG00000009002) #23	MYF6 (ENSSCUG00000008999) #24	ENSSCUG00000008997 #26	LIN7A (ENSSCUG00000008995) #26	ACSS3 (ENSSCUG00000008985) #28	PPFIA2 (ENSSCUG00000008966) #30	CCDC59 (ENSSCUG00000008956) #32	METTL25 (ENSSCUG00000008954) #33	TMTC2 (ENSSCUG00000008949) #35
Australian saltwater crocodile	MODERN SPECIES	49	ENSCPRG00005006174	KRR1 (ENSCPRG00005006167)	PHLDA1 (ENSCPRG00005006137)	NAP1L1 (ENSCPRG00005006105)	BBS10 (ENSCPRG00005006087)	OSBPL8 (ENSCPRG00005006069)	ZDHHC17 (ENSCPRG00005006020) #7	CSRP2 (ENSCPRG00005005963) #8	E2F7 (ENSCPRG00005005958) #10	ENSCPRG00005005917	NAV3 (ENSCPRG00005004050) #14	SYT1 (ENSCPRG00005003800) #18	PAWR (ENSCPRG00005003774) #19	PPP1R12A (ENSCPRG00005003724) #21	RPS16 (ENSCPRG00005003696)	OTOGL (ENSCPRG00005003554) #22	ENSCPRG00005003525	PTPRQ (ENSCPRG00005003495) #23	MYF6 (ENSCPRG00005003486) #24	MYF5 (ENSCPRG00005003473) #25	ENSCPRG00005003470 #26	LIN7A (ENSCPRG00005003468) #26	ACSS3 (ENSCPRG00005003271) #28	PPFIA2 (ENSCPRG00005003178) #30	CCDC59 (ENSCPRG00005003134) #32	METTL25 (ENSCPRG00005003132) #33	TMTC2 (ENSCPRG00005003097) #35	SLC6A15 (ENSCPRG00005003057)	TSPAN19 (ENSCPRG00005003030)	ENSCPRG00005003015	ENSCPRG00005003000
Cryptodira	ANCESTRAL SPECIES	11	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713.u #10	ENSGT00940000157713.v #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Emydidae	ANCESTRAL SPECIES	10	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713.u #10	ENSGT00940000157713.v #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163725	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
painted turtle	MODERN SPECIES		UCP2 (ENSCPBG00000000047)	UCP3 (ENSCPBG00000000048)	C2CD3 (ENSCPBG00000000049)	PPME1 (ENSCPBG00000000050)	P4HA3 (ENSCPBG00000000051)	ENSCPBG00000000052	ENSCPBG00000000053	SPCS2 (ENSCPBG00000000054)	XRRA1 (ENSCPBG00000000055)	RNF169 (ENSCPBG00000000056)	SYT1 (ENSCPBG00000000057) #18	ENSCPBG00000000058	PAWR (ENSCPBG00000000059) #19	PPP1R12A (ENSCPBG00000000060) #21	RPS16 (ENSCPBG00000000062)	OTOGL (ENSCPBG00000000063) #22	ENSCPBG00000000065	PTPRQ (ENSCPBG00000000067) #23	MYF6 (ENSCPBG00000000068) #24	MYF5 (ENSCPBG00000000069) #25	LIN7A (ENSCPBG00000000070) #26	ACSS3 (ENSCPBG00000000071) #28	ENSCPBG00000000072	PPFIA2 (ENSCPBG00000000073) #30	CCDC59 (ENSCPBG00000000075) #32	METTL25 (ENSCPBG00000000076) #33	TMTC2 (ENSCPBG00000000077) #35	SLC6A15 (ENSCPBG00000000079)	TSPAN19 (ENSCPBG00000000080)	ENSCPBG00000000081	ENSCPBG00000000082
Three-toed box turtle	MODERN SPECIES	28	ENSTMTG00000017924	KRR1 (ENSTMTG00000017936)	PHLDA1 (ENSTMTG00000017953)	NAP1L1 (ENSTMTG00000017966)	BBS10 (ENSTMTG00000017983)	OSBPL8 (ENSTMTG00000018028)	ZDHHC17 (ENSTMTG00000018059) #7	CSRP2 (ENSTMTG00000018107) #8	ENSTMTG00000018112 #10	ENSTMTG00000018124 #10	NAV3 (ENSTMTG00000018146) #14	SYT1 (ENSTMTG00000018366) #18	PAWR (ENSTMTG00000018399) #19	PPP1R12A (ENSTMTG00000018415) #21	RPS16 (ENSTMTG00000018474)	OTOGL (ENSTMTG00000018509) #22	PTPRQ (ENSTMTG00000018868) #23	MYF6 (ENSTMTG00000018967) #24	MYF5 (ENSTMTG00000000077) #25	ENSTMTG00000000099 #26	LIN7A (ENSTMTG00000000157) #26	ACSS3 (ENSTMTG00000000183) #28	ENSTMTG00000000244 #30	ENSTMTG00000000306 #30	CCDC59 (ENSTMTG00000000341) #32	METTL25 (ENSTMTG00000000386) #33	TMTC2 (ENSTMTG00000000433) #35	SLC6A15 (ENSTMTG00000000460)	ENSTMTG00000000487	TSPAN19 (ENSTMTG00000000501)	ENSTMTG00000000530
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713.u #10	ENSGT00940000157713.v #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Abingdon island giant tortoise	MODERN SPECIES	2351							ENSCABG00000020097	ENSCABG00000020235	ENSCABG00000020236	ENSCABG00000020237	KLF8 (ENSCABG00000020238)	ENSCABG00000020239	ENSCABG00000020241	ENSCABG00000020242	ENSCABG00000020244	OTOGL (ENSCABG00000020245) #22	ENSCABG00000020248	PTPRQ (ENSCABG00000020251) #23	MYF6 (ENSCABG00000020254) #24	MYF5 (ENSCABG00000020256) #25
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005000031	KRR1 (ENSGEVG00005000023)	PHLDA1 (ENSGEVG00005000018)	NAP1L1 (ENSGEVG00005000012)	BBS10 (ENSGEVG00005008898)	OSBPL8 (ENSGEVG00005008789)	ZDHHC17 (ENSGEVG00005008730) #7	CSRP2 (ENSGEVG00005008707) #8	ENSGEVG00005008668 #10	ENSGEVG00005008646 #10	NAV3 (ENSGEVG00005008397) #14	SYT1 (ENSGEVG00005008297) #18	PAWR (ENSGEVG00005008262) #19	PPP1R12A (ENSGEVG00005008199) #21	RPS16 (ENSGEVG00005008158)	OTOGL (ENSGEVG00005007663) #22	PTPRQ (ENSGEVG00005007409) #23	MYF6 (ENSGEVG00005007365) #24	MYF5 (ENSGEVG00005007350) #25	LIN7A (ENSGEVG00005007306) #26	ACSS3 (ENSGEVG00005007236) #28	PPFIA2 (ENSGEVG00005007013) #30	CCDC59 (ENSGEVG00005006965) #32	METTL25 (ENSGEVG00005006938) #33	TMTC2 (ENSGEVG00005006853) #35	ENSGEVG00005006829	ENSGEVG00005006780	ENSGEVG00005006758	ENSGEVG00005006696	ALX1 (ENSGEVG00005006662)	RASSF9 (ENSGEVG00005006645)
Chinese turtle	MODERN SPECIES	718						ENSPSIG00000001298	ZDHHC17 (ENSPSIG00000012905) #7	CSRP2 (ENSPSIG00000012637) #8	E2F7 (ENSPSIG00000012629) #10	NAV3 (ENSPSIG00000009060) #14	SYT1 (ENSPSIG00000007501) #18	PAWR (ENSPSIG00000007487) #19	PPP1R12A (ENSPSIG00000017200) #21	ENSPSIG00000016930	ENSPSIG00000016823	OTOGL (ENSPSIG00000014034) #22	ENSPSIG00000013550	MYF6 (ENSPSIG00000012468) #24	MYF5 (ENSPSIG00000012000) #25	LIN7A (ENSPSIG00000011871) #26	ACSS3 (ENSPSIG00000009322) #28	PPFIA2 (ENSPSIG00000007454) #30	METTL25 (ENSPSIG00000007019) #33	TMTC2 (ENSPSIG00000006034) #35
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000166459.B	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00940000166459.B	ENSGT00940000165853.i	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Elapidae	ANCESTRAL SPECIES	6	ENSGT00440000034107.b	ENSGT00940000166459.B	ENSGT00940000166459.A.b	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b.f.a #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277.k	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00940000166459.A.b	ENSGT00940000166459.A.a	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b.f.a #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277.k	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00940000166459.B	ENSGT00940000166459.A.b	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00960000190133	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b.f.a #30	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277.k	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c	ENSGT00640000091574
Mainland tiger snake	MODERN SPECIES	20	ENSNSUG00000002098	KRR1 (ENSNSUG00000002095)	PHLDA1 (ENSNSUG00000002091)	NAP1L1 (ENSNSUG00000001802)	ENSNSUG00000001793	ZDHHC17 (ENSNSUG00000001783) #7	CSRP2 (ENSNSUG00000001781) #8	E2F7 (ENSNSUG00000001756) #10	ENSNSUG00000001751	NAV3 (ENSNSUG00000001737) #14	SYT1 (ENSNSUG00000001720) #18	PAWR (ENSNSUG00000001717) #19	PPP1R12A (ENSNSUG00000000977) #21	ENSNSUG00000000970	ENSNSUG00000000966	OTOGL (ENSNSUG00000000909) #22	ENSNSUG00000000905	PTPRQ (ENSNSUG00000000888) #23	MYF6 (ENSNSUG00000000885) #24	MYF5 (ENSNSUG00000000881) #25	LIN7A (ENSNSUG00000000879) #26	ACSS3 (ENSNSUG00000000722) #28	PPFIA2 (ENSNSUG00000000679) #30	CCDC59 (ENSNSUG00000000657) #32	METTL25 (ENSNSUG00000000356) #33	TMTC2 (ENSNSUG00000000314) #35	ENSNSUG00000000296	ENSNSUG00000000286	ENSNSUG00000000256	ALX1 (ENSNSUG00000000235)	RASSF9 (ENSNSUG00000000215)
Eastern brown snake	MODERN SPECIES		ENSPTXG00000007387	ENSPTXG00000007385	KRR1 (ENSPTXG00000007383)	PHLDA1 (ENSPTXG00000007382)	NAP1L1 (ENSPTXG00000007381)	ENSPTXG00000007380	OSBPL8 (ENSPTXG00000007376)	ZDHHC17 (ENSPTXG00000007375) #7	CSRP2 (ENSPTXG00000007374) #8	E2F7 (ENSPTXG00000007372) #10	NAV3 (ENSPTXG00000007360) #14	SYT1 (ENSPTXG00000007357) #18	PAWR (ENSPTXG00000007356) #19	PPP1R12A (ENSPTXG00000007355) #21	RPS16 (ENSPTXG00000007353)	OTOGL (ENSPTXG00000007346) #22	ENSPTXG00000007343	PTPRQ (ENSPTXG00000007341) #23	MYF6 (ENSPTXG00000007339) #24	MYF5 (ENSPTXG00000007338) #25	LIN7A (ENSPTXG00000007335) #26	ACSS3 (ENSPTXG00000007330) #28	PPFIA2 (ENSPTXG00000007321) #30	CCDC59 (ENSPTXG00000007319) #32	METTL25 (ENSPTXG00000007317) #33	TMTC2 (ENSPTXG00000007315) #35	ENSPTXG00000007314	ENSPTXG00000007312	ENSPTXG00000007310	ALX1 (ENSPTXG00000007309)	RASSF9 (ENSPTXG00000007307)
Indian cobra	MODERN SPECIES	6	ENSNNAG00000005878	KRR1 (ENSNNAG00000005951)	ENSNNAG00000006071	ENSNNAG00000006093	PHLDA1 (ENSNNAG00000006109)	NAP1L1 (ENSNNAG00000006156)	OSBPL8 (ENSNNAG00000006212)	ZDHHC17 (ENSNNAG00000006609) #7	CSRP2 (ENSNNAG00000006626) #8	E2F7 (ENSNNAG00000006676) #10	NAV3 (ENSNNAG00000007065) #14	SYT1 (ENSNNAG00000007300) #18	PAWR (ENSNNAG00000007341) #19	PPP1R12A (ENSNNAG00000007491) #21	RPS16 (ENSNNAG00000010459)	OTOGL (ENSNNAG00000010528) #22	ENSNNAG00000011195	PTPRQ (ENSNNAG00000011257) #23	MYF6 (ENSNNAG00000011423) #24	MYF5 (ENSNNAG00000011436) #25	LIN7A (ENSNNAG00000011463) #26	ACSS3 (ENSNNAG00000011558) #28	PPFIA2 (ENSNNAG00000011658) #30	CCDC59 (ENSNNAG00000012004) #32	METTL25 (ENSNNAG00000012065) #33	TMTC2 (ENSNNAG00000012643) #35	SLC6A15 (ENSNNAG00000012726)	ENSNNAG00000012826	ALX1 (ENSNNAG00000012891)	RASSF9 (ENSNNAG00000012912)	NTS (ENSNNAG00000012925)
Lizard	MODERN SPECIES	4	RAB21 (ENSACAG00000007432)	TMEM19 (ENSACAG00000007396)	ZFC3H1 (ENSACAG00000007327)	LGR5 (ENSACAG00000007193)	TSPAN8 (ENSACAG00000007164)	PTPRR (ENSACAG00000021144)	PTPRB (ENSACAG00000001460)	ENSACAG00000045283	ENSACAG00000045240	SYT1 (ENSACAG00000013826) #18	ENSACAG00000039009	PAWR (ENSACAG00000038363) #19	PPP1R12A (ENSACAG00000014016) #21	ENSACAG00000042872	ENSACAG00000014176	OTOGL (ENSACAG00000014205) #22	PTPRQ (ENSACAG00000014272) #23	MYF6 (ENSACAG00000042468) #24	MYF5 (ENSACAG00000014431) #25	LIN7A (ENSACAG00000014452) #26	ACSS3 (ENSACAG00000014473) #28	ENSACAG00000039448	PPFIA2 (ENSACAG00000014550) #30	ENSACAG00000014707	METTL25 (ENSACAG00000014713) #33	ENSACAG00000044939	ENSACAG00000034859	TMTC2 (ENSACAG00000014731) #35	ENSACAG00000042686	ENSACAG00000005259	SLC6A15 (ENSACAG00000010944)
Laterata	ANCESTRAL SPECIES	6	ENSGT00440000034107.b	ENSGT00940000166459.B.e	ENSGT00940000166459.A	ENSGT00390000018775	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT01040000241648	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000163898	ENSGT00940000158251	ENSGT00950000182839.A.c
Common wall lizard	MODERN SPECIES	1	ENSPMRG00000018446	KRR1 (ENSPMRG00000018460)	PHLDA1 (ENSPMRG00000018474)	NAP1L1 (ENSPMRG00000018484)	OSBPL8 (ENSPMRG00000018504)	ZDHHC17 (ENSPMRG00000018520) #7	ENSPMRG00000018530	CSRP2 (ENSPMRG00000018535) #8	E2F7 (ENSPMRG00000018546) #10	NAV3 (ENSPMRG00000018638) #14	SYT1 (ENSPMRG00000018726) #18	PAWR (ENSPMRG00000018731) #19	PPP1R12A (ENSPMRG00000018742) #21	ENSPMRG00000018764	ENSPMRG00000018768	OTOGL (ENSPMRG00000018808) #22	ENSPMRG00000019031	PTPRQ (ENSPMRG00000019053) #23	MYF6 (ENSPMRG00000019140) #24	MYF5 (ENSPMRG00000019143) #25	LIN7A (ENSPMRG00000019147) #26	ACSS3 (ENSPMRG00000019167) #28	PPFIA2 (ENSPMRG00000019499) #30	ENSPMRG00000021433	CCDC59 (ENSPMRG00000021438) #32	METTL25 (ENSPMRG00000021455) #33	ENSPMRG00000021479	TMTC2 (ENSPMRG00000021488) #35	ENSPMRG00000021497	SLC6A15 (ENSPMRG00000021501)	ENSPMRG00000021518
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000001806	ENSSMRG00000001811	ENSSMRG00000001816	KRR1 (ENSSMRG00000001818)	PHLDA1 (ENSSMRG00000001842)	NAP1L1 (ENSSMRG00000001927)	OSBPL8 (ENSSMRG00000002083)	ZDHHC17 (ENSSMRG00000002140) #7	CSRP2 (ENSSMRG00000002146) #8	E2F7 (ENSSMRG00000002156) #10	NAV3 (ENSSMRG00000002199) #14	SYT1 (ENSSMRG00000010234) #18	PAWR (ENSSMRG00000010238) #19	PPP1R12A (ENSSMRG00000010257) #21	RPS16 (ENSSMRG00000010263)	OTOGL (ENSSMRG00000010267) #22	ENSSMRG00000010274	ENSSMRG00000010275	PTPRQ (ENSSMRG00000010276) #23	MYF6 (ENSSMRG00000010285) #24	MYF5 (ENSSMRG00000010286) #25	LIN7A (ENSSMRG00000010290) #26	ACSS3 (ENSSMRG00000010292) #28	PPFIA2 (ENSSMRG00000010302) #30	ENSSMRG00000010304	METTL25 (ENSSMRG00000010319) #33	TMTC2 (ENSSMRG00000010414) #35	SLC6A15 (ENSSMRG00000010425)	ENSSMRG00000010470	ENSSMRG00000010489	ALX1 (ENSSMRG00000010491)
tuatara	MODERN SPECIES	1779	ENSSPUG00000007522	KRR1 (ENSSPUG00000007513)	ENSSPUG00000007507	PHLDA1 (ENSSPUG00000007502)	NAP1L1 (ENSSPUG00000007452)	BBS10 (ENSSPUG00000007433)	OSBPL8 (ENSSPUG00000007161)	ZDHHC17 (ENSSPUG00000007115) #7	CSRP2 (ENSSPUG00000007078) #8	E2F7 (ENSSPUG00000007017) #10	NAV3 (ENSSPUG00000006945) #14	SYT1 (ENSSPUG00000006892) #18	PAWR (ENSSPUG00000006881) #19	PPP1R12A (ENSSPUG00000006848) #21	RPS16 (ENSSPUG00000006832)	OTOGL (ENSSPUG00000006721) #22	PTPRQ (ENSSPUG00000006635) #23	MYF6 (ENSSPUG00000006611) #24	ENSSPUG00000006578 #26	ENSSPUG00000006572 #26	ACSS3 (ENSSPUG00000006460) #28	PPFIA2 (ENSSPUG00000006051) #30
Anura	ANCESTRAL SPECIES		ENSGT00390000002524	ENSGT00940000158319	ENSGT00940000156375	ENSGT00940000157129	ENSGT00940000155834	ENSGT00940000162446	ENSGT00940000164439	ENSGT00940000154098.a	ENSGT00730000111360	ENSGT00390000008708	ENSGT00940000157255	ENSGT01050000244882.a.a.a.a	ENSGT00940000160095	ENSGT00390000013286	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00660000096975	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000167105	ENSGT00940000163898	ENSGT00940000158251
Frog	MODERN SPECIES	3	elk3 (ENSXETG00000001891)	cdk17 (ENSXETG00000001892)	ENSXETG00000049231	c12orf63 (ENSXETG00000045266)	nedd1 (ENSXETG00000021683)	ENSXETG00000034921	ENSXETG00000032908	tmpo (ENSXETG00000018759)	slc25a3 (ENSXETG00000018767)	ENSXETG00000045338	nuak1 (ENSXETG00000018772)	avpr1a (ENSXETG00000018781)	ppm1h (ENSXETG00000018793)	ptpn3 (ENSXETG00000018796)	rps16 (ENSXETG00000018809)	OTOGL (ENSXETG00000014502) #22	PTPRQ (ENSXETG00000030349) #23	myf6 (ENSXETG00000027340) #24	myf5 (ENSXETG00000014520) #25	lin7a (ENSXETG00000014525) #26	acss3 (ENSXETG00000014528) #28	ppfia2 (ENSXETG00000014532) #30	ccdc59 (ENSXETG00000014539) #32	mettl25 (ENSXETG00000014540) #33	ENSXETG00000047662	tmtc2 (ENSXETG00000021370) #35	ENSXETG00000042111	slc6a15 (ENSXETG00000021372)	lrriq1 (ENSXETG00000037765)	alx1 (ENSXETG00000021397)	rassf9 (ENSXETG00000011745)
Leishan spiny toad	MODERN SPECIES	6	CFAP54 (ENSLLEG00000012736)	ENSLLEG00000013973	ENSLLEG00000013992	ENSLLEG00000014201	ENSLLEG00000016337	ENSLLEG00000016597	ENSLLEG00000016633	ENSLLEG00000016847	NUAK1 (ENSLLEG00000017219)	AVPR1A (ENSLLEG00000017308)	PPM1H (ENSLLEG00000017365)	ENSLLEG00000017515	MON2 (ENSLLEG00000017568)	ENSLLEG00000018351	ENSLLEG00000018379	OTOGL (ENSLLEG00000018482) #22	ENSLLEG00000019169	PTPRQ (ENSLLEG00000019234) #23	MYF6 (ENSLLEG00000020820) #24	MYF5 (ENSLLEG00000020856) #25	LIN7A (ENSLLEG00000020908) #26	ENSLLEG00000021060	ACSS3 (ENSLLEG00000021119) #28	ENSLLEG00000021608	PPFIA2 (ENSLLEG00000021708) #30	ENSLLEG00000023610	CCDC59 (ENSLLEG00000023716) #32	METTL25 (ENSLLEG00000023763) #33	ENSLLEG00000024005	TMTC2 (ENSLLEG00000024034) #35	SLC6A15 (ENSLLEG00000024199)
Coelacanth	MODERN SPECIES	502								ENSLACG00000005818	ENSLACG00000006968	SYT1 (ENSLACG00000009958) #18	ENSLACG00000011915	ENSLACG00000012356 #19	pawr (ENSLACG00000013694) #19	PPP1R12A (ENSLACG00000014167) #21	RPS16 (ENSLACG00000015556)	OTOGL (ENSLACG00000015790) #22	ENSLACG00000016284
Actinopterygii	ANCESTRAL SPECIES	17	ENSGT00940000160727	ENSGT00390000018775	ENSGT00940000163632	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00960000187527	ENSGT00940000159215 #23	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00660000096975	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000167105	ENSGT00940000163898	ENSGT00940000158251
Reedfish	MODERN SPECIES		uhrf1bp1l (ENSECRG00000009040)	ENSECRG00000009080	IKBIP (ENSECRG00000009093)	arfgap3 (ENSECRG00000009110)	pacsin2 (ENSECRG00000009143)	ttll1 (ENSECRG00000009159)	mcat (ENSECRG00000009176)	ENSECRG00000009184	nav3 (ENSECRG00000009243) #14	syt1a (ENSECRG00000009372) #18	pawr (ENSECRG00000009402) #19	ENSECRG00000009415	ENSECRG00000009427 #21	ENSECRG00000009442	rps16 (ENSECRG00000009451)	OTOGL (ENSECRG00000009486) #22	ENSECRG00000009546	PTPRQ (ENSECRG00000009623) #23	myf6 (ENSECRG00000009908) #24	ENSECRG00000009918 ##25	lin7a (ENSECRG00000009937) #26	ACSS3 (ENSECRG00000009948) #28	ppfia2 (ENSECRG00000010095) #30	ccdc59 (ENSECRG00000010497) #32	mettl25 (ENSECRG00000010503) #33	ENSECRG00000010511	tmtc2a (ENSECRG00000010528) #35	SLC6A15 (ENSECRG00000010556)	alx1 (ENSECRG00000010569)	RASSF9 (ENSECRG00000010575)	NTS (ENSECRG00000010584)
Neopterygii	ANCESTRAL SPECIES	21	ENSGT00390000018775	ENSGT00940000163632	ENSGT00940000165334	ENSGT00440000039564.b	ENSGT00940000153362.a	ENSGT00390000002417	ENSGT00940000156622	ENSGT00530000063074.b.b #7	ENSGT00940000154980 #8	ENSGT00940000157713 #10	ENSGT00940000158014 #14	ENSGT00940000155394 #18	ENSGT00390000000406 #19	ENSGT00940000156120.a #21	ENSGT00390000013067	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00960000187527	ENSGT00950000182959.a.b.b.a #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b #30	ENSGT00660000096975	ENSGT00390000006546 #32	ENSGT00530000063745.b #33	ENSGT00940000156144 #35	ENSGT00940000157277	ENSGT00940000167105	ENSGT00940000163898	ENSGT00940000158251
Osteoglossocephalai	ANCESTRAL SPECIES	657															ENSGT00390000013067.l	ENSGT00940000160698 #22	ENSGT00940000159215 #23
Osteoglossiformes	ANCESTRAL SPECIES	251	ENSGT00940000159670	ENSGT00440000034107.b	ENSGT00390000010830	ENSGT00390000018775	ENSGT00940000165334	ENSGT00440000039564.b.a	ENSGT00940000153362.a.d	ENSGT00940000156622.a	ENSGT00530000063074.b.b.c #7	ENSGT00940000154980.db #8	ENSGT00940000157713.b #10	ENSGT00940000158014.a.b #14	ENSGT00390000000406.n #19	ENSGT00940000156120.a.a #21	ENSGT00390000013067.l	ENSGT00940000160698 #22	ENSGT00940000167492.i	ENSGT00950000182959.a.b.b.a.k #24	ENSGT00950000182959.a.a #25	ENSGT00940000153222.a.a #26	ENSGT00940000157479 #28	ENSGT01050000244900.a.a.a.a.b.`b #30
P. kingsleyae	MODERN SPECIES	330											ENSPKIG00000003485 #14	syt1a (ENSPKIG00000003538) #18	PAWR (ENSPKIG00000003600) #19	ppp1r12a (ENSPKIG00000003762) #21	rps16 (ENSPKIG00000004000)	OTOGL (ENSPKIG00000004061) #22	ENSPKIG00000004182	myf6 (ENSPKIG00000004248) #24	myf5 (ENSPKIG00000004272) #25	lin7a (ENSPKIG00000004317) #26	ACSS3 (ENSPKIG00000004377) #28	ppfia2 (ENSPKIG00000004590) #30
Asian bonytongue	MODERN SPECIES	16	tph2 (ENSSFOG00015018320)	TRHDE (ENSSFOG00015018357)	cmah (ENSSFOG00015018402)	krr1 (ENSSFOG00015031941)	phlda1 (ENSSFOG00015033220)	nap1l1 (ENSSFOG00015018510)	OSBPL8 (ENSSFOG00015018553)	zdhhc17 (ENSSFOG00015018700) #7	csrp2 (ENSSFOG00015018779) #8	nav3 (ENSSFOG00015018832) #14	ENSSFOG00015018791	syt1a (ENSSFOG00015031929) #18	PAWR (ENSSFOG00015019109) #19	ppp1r12a (ENSSFOG00015019159) #21	rps16 (ENSSFOG00015019382)	OTOGL (ENSSFOG00015019419) #22	ENSSFOG00015019468	myf6 (ENSSFOG00015019606) #24	myf5 (ENSSFOG00015019621) #25	lin7a (ENSSFOG00015019629) #26	ACSS3 (ENSSFOG00015019639) #28	ppfia2 (ENSSFOG00015019713) #30	TMTC2 (ENSSFOG00015019839) #35	ENSSFOG00015029516	IQSEC3 (ENSSFOG00015019895)	ENSSFOG00015019921	ddx11 (ENSSFOG00015019931)	fkbp4 (ENSSFOG00015019964)	ENSSFOG00015019985	ENSSFOG00015020008	ENSSFOG00015020016
Clupeocephala	ANCESTRAL SPECIES	111																ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT01010000229699	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Euteleosteomorpha	ANCESTRAL SPECIES	238														ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT01010000229699	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Protacanthopterygii	ANCESTRAL SPECIES	45	ENSGT00940000155209.lb	ENSGT00940000156019.c.a	ENSGT00940000159260.g	ENSGT01060000248920	ENSGT00550000074976	ENSGT00530000064743.a	ENSGT00730000111591.a	ENSGT00940000154156.c.a	ENSGT00940000165999	ENSGT00940000164357.a	ENSGT00940000166153	ENSGT00940000156149.A	ENSGT00390000000510	ENSGT01010000222360.E.c	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT01010000229699	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	602													ENSGT01100000263547.a.b.b.a.a.b.a.b	ENSGT01010000222360.E.c.r	ENSGT00940000155394.i.b.n #18	ENSGT00940000160698.a #22	ENSGT00940000167492.h	ENSGT00940000155908.b.y.b	ENSGT00390000016717.f	ENSGT00940000157200.z	ENSGT01050000244857.A.a.a.c	ENSGT00390000000212.e	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n.e	ENSGT00940000154688.a.b.b.e	ENSGT00940000157493.n	ENSGT00940000155083.b.a.a.c	ENSGT00940000165406.e
Huchen	DUPLICATION
Huchen	DUPLICATION
Huchen	MODERN SPECIES	536	rbm28 (ENSHHUG00000045631)	ENSHHUG00000045626	PRRT4 (ENSHHUG00000045621)	IMPDH1 (ENSHHUG00000045480)	ENSHHUG00000045470	gcsha (ENSHHUG00000045460)	ENSHHUG00000045453	ENSHHUG00000045447	ENSHHUG00000045434	ENSHHUG00000045430	ENSHHUG00000045425	calub (ENSHHUG00000045417)	ENSHHUG00000045371 #18	ENSHHUG00000045363 #22	ENSHHUG00000045361 #22	ENSHHUG00000045359 #22	ENSHHUG00000045356	ENSHHUG00000045354	ENSHHUG00000045321	wash1 (ENSHHUG00000045294)	fkbp4 (ENSHHUG00000045241)	ENSHHUG00000045237	ENSHHUG00000045236	c2cd5 (ENSHHUG00000045068)	ENSHHUG00000045064	ENSHHUG00000045062	ENSHHUG00000045046	dnaja2b (ENSHHUG00000045038)	ENSHHUG00000045033	cd9a (ENSHHUG00000045009)	ENSHHUG00000045005
Huchen	MODERN SPECIES	536		ENSHHUG00000045647	rbm28 (ENSHHUG00000045631)	ENSHHUG00000045626	PRRT4 (ENSHHUG00000045621)	IMPDH1 (ENSHHUG00000045480)	ENSHHUG00000045470	gcsha (ENSHHUG00000045460)	ENSHHUG00000045453	ENSHHUG00000045447	ENSHHUG00000045434	ENSHHUG00000045430	ENSHHUG00000045425	calub (ENSHHUG00000045417)	ENSHHUG00000045371 #18	ENSHHUG00000045363 #22	ENSHHUG00000045361 #22	ENSHHUG00000045359 #22	ENSHHUG00000045356	ENSHHUG00000045354	ENSHHUG00000045321	wash1 (ENSHHUG00000045294)	fkbp4 (ENSHHUG00000045241)	ENSHHUG00000045237	ENSHHUG00000045236	c2cd5 (ENSHHUG00000045068)	ENSHHUG00000045064	ENSHHUG00000045062	ENSHHUG00000045046	dnaja2b (ENSHHUG00000045038)	ENSHHUG00000045033
Huchen	MODERN SPECIES	536	ENSHHUG00000045647	rbm28 (ENSHHUG00000045631)	ENSHHUG00000045626	PRRT4 (ENSHHUG00000045621)	IMPDH1 (ENSHHUG00000045480)	ENSHHUG00000045470	gcsha (ENSHHUG00000045460)	ENSHHUG00000045453	ENSHHUG00000045447	ENSHHUG00000045434	ENSHHUG00000045430	ENSHHUG00000045425	calub (ENSHHUG00000045417)	ENSHHUG00000045371 #18	ENSHHUG00000045363 #22	ENSHHUG00000045361 #22	ENSHHUG00000045359 #22	ENSHHUG00000045356	ENSHHUG00000045354	ENSHHUG00000045321	wash1 (ENSHHUG00000045294)	fkbp4 (ENSHHUG00000045241)	ENSHHUG00000045237	ENSHHUG00000045236	c2cd5 (ENSHHUG00000045068)	ENSHHUG00000045064	ENSHHUG00000045062	ENSHHUG00000045046	dnaja2b (ENSHHUG00000045038)	ENSHHUG00000045033	cd9a (ENSHHUG00000045009)
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00940000158437.f	ENSGT00620000087961.a.a.a	ENSGT00940000155209.lb.g.b	ENSGT00940000156019.c.a.c	ENSGT00940000159260.g.d	ENSGT01060000248920.b	ENSGT00550000074976.k.b	ENSGT00530000064743.a.e	ENSGT00730000111591.a.c	ENSGT00940000154156.c.a.h	ENSGT00940000164357.a	ENSGT00940000166153	ENSGT01100000263547.a.b.b.a.a.b.a.b	ENSGT01010000222360.E.c.r	ENSGT00940000155394.i.b.n #18	ENSGT00940000160698.a #22	ENSGT00940000167492.h	ENSGT00940000155908.b.y.b	ENSGT00390000016717.f	ENSGT00940000157200.z	ENSGT01050000244857.A.a.a.c	ENSGT00390000000212.e	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n.e	ENSGT00940000154688.a.b.b.e	ENSGT00940000165748.b.b	ENSGT00940000155083.b.a.a.c	ENSGT00940000165406.e	ENSGT00940000163804	ENSGT00390000000950.c.b.t	ENSGT01060000248595.b.a.a.l
Salmo	ANCESTRAL SPECIES	45													ENSGT01100000263547.a.b.b.a.a.b.a.b	ENSGT01010000222360.E.c.r	ENSGT00940000155394.i.b.n #18	ENSGT00940000160698.a #22	ENSGT00940000167492.h	ENSGT00940000155908.b.y.b	ENSGT00390000016717.f	ENSGT00940000157200.z	ENSGT00390000000212.e	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n.e	ENSGT00940000154688.a.b.b.e	ENSGT00940000165748.b.b	ENSGT00940000155083.b.a.a.c	ENSGT00940000165406.e	ENSGT00940000163804	ENSGT00390000000950.c.b.t	ENSGT01060000248595.b.a.a.l	ENSGT00940000165068
Atlantic salmon	MODERN SPECIES	7	CACNA2D1 (ENSSSAG00000008399)	HGF (ENSSSAG00000008283)	lrrc4.2 (ENSSSAG00000116053)	ENSSSAG00000044405	rbm28 (ENSSSAG00000008259)	ENSSSAG00000008254	ENSSSAG00000008246	IMPDH1 (ENSSSAG00000007869)	ENSSSAG00000007830	ENSSSAG00000007803	ENSSSAG00000086348	ENSSSAG00000109325	ENSSSAG00000089142	calub (ENSSSAG00000007784)	ENSSSAG00000094211 #18	ENSSSAG00000007625 #22	ENSSSAG00000007546	ENSSSAG00000007501	wash1 (ENSSSAG00000007490)	fkbp4 (ENSSSAG00000007460)	ENSSSAG00000107863	ENSSSAG00000007346	ENSSSAG00000093333	ENSSSAG00000006921	dnaja2b (ENSSSAG00000006895)	ENSSSAG00000006883	ENSSSAG00000106492	ENSSSAG00000006852	ENSSSAG00000006844	sephs1 (ENSSSAG00000071049)	cpt1b (ENSSSAG00000116589)
River trout	MODERN SPECIES	8	CACNA2D1 (ENSSTUG00000035304)	HGF (ENSSTUG00000035604)	ENSSTUG00000035681	lrrc4.2 (ENSSTUG00000035686)	ENSSTUG00000035693	rbm28 (ENSSTUG00000035697)	ENSSTUG00000035708	ENSSTUG00000035713	ENSSTUG00000035718	IMPDH1 (ENSSTUG00000035744)	gcsha (ENSSTUG00000035871)	ENSSTUG00000035883	ENSSTUG00000035892	calub (ENSSTUG00000035914)	ENSSTUG00000035939 #18	ENSSTUG00000035980 #22	ENSSTUG00000036635	IQSEC3 (ENSSTUG00000036849)	ENSSTUG00000036971	wash1 (ENSSTUG00000036992)	fkbp4 (ENSSTUG00000037296)	c2cd5 (ENSSTUG00000038351)	ENSSTUG00000038816	ENSSTUG00000038825	dnaja2b (ENSSTUG00000039012)	ENSSTUG00000039131	ENSSTUG00000039137	cd9a (ENSSTUG00000039163)	zgc:77752 (ENSSTUG00000039179)	ENSSTUG00000039199	ENSSTUG00000039204
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000158203.g	ENSGT00940000158437.f.a.a	ENSGT00620000087961.a.a.a	ENSGT00940000155209.lb.g.b	ENSGT00940000156019.c.a.c	ENSGT00940000159260.g.d	ENSGT01060000248920.b	ENSGT00550000074976.k.a.b	ENSGT00730000111591.a.c	ENSGT00940000154156.c.a.h	ENSGT00940000164357.a.a	ENSGT00940000166153	ENSGT01100000263547.a.b.b.a.a.b.a.b	ENSGT01010000222360.E.c.r	ENSGT00940000155394.i.b.n #18	ENSGT00940000160698.a #22	ENSGT00940000167492.h	ENSGT00940000155908.b.y.b	ENSGT00390000016717.f	ENSGT00940000157200.z	ENSGT01050000244857.A.a.a.c	ENSGT00390000000212.e	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n.e	ENSGT00940000154688.a.b.b.e	ENSGT00940000165748.b.b	ENSGT00940000155083.b.a.a.c	ENSGT00940000165406.e	ENSGT00940000163804	ENSGT00390000000950.c.b.t	ENSGT01060000248595.b.a.a.l
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000158203.g	ENSGT00940000158437.f.a.a	ENSGT00940000158437.f.b	ENSGT00620000087961.a.a.a	ENSGT00940000155209.lb.g.b	ENSGT00940000156019.c.a.c	ENSGT00940000159260.g.d	ENSGT01060000248920.b	ENSGT00550000074976.k.a.b	ENSGT00730000111591.a.c	ENSGT00940000154156.c.a.h	ENSGT00940000164357.a.a	ENSGT00940000166153	ENSGT01100000263547.a.b.b.a.a.b.a.b	ENSGT01010000222360.E.c.r	ENSGT00940000160698.a #22	ENSGT00940000167492.h	ENSGT00940000155908.b.y.b	ENSGT00390000016717.f	ENSGT00940000157200.z	ENSGT01050000244857.A.a.a.c	ENSGT00390000000212.e	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n.e	ENSGT00940000154688.a.b.b.e	ENSGT00940000165748.b.b	ENSGT00940000155083.b.a.a.c	ENSGT00940000165406.e	ENSGT00940000163804	ENSGT00390000000950.c.b.t	ENSGT01060000248595.b.a.a.l
Coho salmon	MODERN SPECIES	24	sema3ab (ENSOKIG00005023857)	sema3e (ENSOKIG00005026672)	ENSOKIG00005026785	CACNA2D1 (ENSOKIG00005027948)	HGF (ENSOKIG00005029076)	lrrc4.2 (ENSOKIG00005029244)	ENSOKIG00005029257	ENSOKIG00005029267	rbm28 (ENSOKIG00005029301)	PRRT4 (ENSOKIG00005029354)	IMPDH1 (ENSOKIG00005029396)	ENSOKIG00005030596	ENSOKIG00005030620	ENSOKIG00005030652	calub (ENSOKIG00005030689)	ENSOKIG00005030720 #22	ENSOKIG00005031359	IQSEC3 (ENSOKIG00005031688)	wash1 (ENSOKIG00005031745)	fkbp4 (ENSOKIG00005031833)	B4GALNT3 (ENSOKIG00005033227)	c2cd5 (ENSOKIG00005033850)	ENSOKIG00005034157	ENSOKIG00005034219	dnaja2b (ENSOKIG00005034597)	ENSOKIG00005034678	CD9 (ENSOKIG00005034702)	ENSOKIG00005034770	zgc:77752 (ENSOKIG00005034776)	ENSOKIG00005034786	ENSOKIG00005034796
Chinook salmon	MODERN SPECIES	30	sema3d (ENSOTSG00005028773)	sema3ab (ENSOTSG00005029165)	sema3e (ENSOTSG00005032067)	ENSOTSG00005032174	CACNA2D1 (ENSOTSG00005032179)	HGF (ENSOTSG00005032187)	lrrc4.2 (ENSOTSG00005032191)	ENSOTSG00005032193	rbm28 (ENSOTSG00005032194)	ENSOTSG00005032195	impdh1a (ENSOTSG00005032197)	ENSOTSG00005033059	ENSOTSG00005033061	ENSOTSG00005033063	calub (ENSOTSG00005033066)	ENSOTSG00005033068 #22	ENSOTSG00005033069 #23	ENSOTSG00005033070	ENSOTSG00005033071	wash1 (ENSOTSG00005033072)	fkbp4 (ENSOTSG00005033076)	B4GALNT3 (ENSOTSG00005035314)	c2cd5 (ENSOTSG00005035473)	ENSOTSG00005035867	ENSOTSG00005035869	dnaja2b (ENSOTSG00005035870)	cd9a (ENSOTSG00005035909)	zgc:77752 (ENSOTSG00005035910)	ENSOTSG00005035912	sephs1 (ENSOTSG00005035915)	cpt1b (ENSOTSG00005035919)
Salmoninae	ANCESTRAL SPECIES	71	ENSGT00940000159260.g.d	ENSGT01060000248920.b	ENSGT00550000074976.k.b	ENSGT00530000064743.a.e	ENSGT00730000111591.a.c	ENSGT00940000154156.c.a.h	ENSGT00940000177602	ENSGT00940000165999.c	ENSGT00940000164357.a	ENSGT00940000166153	ENSGT00940000156149.A	ENSGT00940000160537.ab	ENSGT00390000000510	ENSGT01010000222360.E.c.q	ENSGT00940000155394.i.b.m #18	ENSGT00940000160698.b #22	ENSGT00940000167492.g	ENSGT00940000155908.b.y.a	ENSGT01010000229699	ENSGT00940000165002.q.b.b	ENSGT00940000155908.a.y	ENSGT00940000155908.b.z	ENSGT00390000016717.e	ENSGT00950000182970.B	ENSGT00940000157200.y	ENSGT01050000244857.A.a.a.d	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212.f	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00620000087961.a.b.a.a.a.a	ENSGT00620000087961.a.a.b	ENSGT00940000155209.lb.g.a.b	ENSGT00940000156019.c.a.d	ENSGT00940000159260.g.c	ENSGT01060000248920.a	ENSGT00550000074976.k.a.a.a	ENSGT00530000064743.a.f	ENSGT00730000111591.a.d	ENSGT00940000154156.c.a.g	ENSGT00940000165999.d	ENSGT00940000156149.A	ENSGT00390000000510	ENSGT01010000222360.E.c.q	ENSGT00940000155394.i.b.m #18	ENSGT00940000160698.b #22	ENSGT00940000167492.g	ENSGT00940000155908.b.y.a	ENSGT01010000229699	ENSGT00940000155908.b.z	ENSGT00390000016717.e	ENSGT00950000182970.B	ENSGT00940000157200.y	ENSGT01050000244857.A.a.a.d	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212.f	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT00390000009899.b.n.f	ENSGT00940000154688.a.b.b.f
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00940000158437.e	ENSGT00620000087961.a.b.a.a.a.a	ENSGT00620000087961.a.a.b	ENSGT00940000155209.lb.g.a.b	ENSGT00940000156019.c.a.d	ENSGT00940000159260.g.c	ENSGT01060000248920.a	ENSGT00530000064743.a.f	ENSGT00730000111591.a.d	ENSGT00940000154156.c.a.g	ENSGT00940000165999.d	ENSGT00940000156149.A	ENSGT00390000000510	ENSGT01010000222360.E.c.q	ENSGT00940000155394.i.b.m #18	ENSGT00940000160698.b #22	ENSGT00940000167492.g	ENSGT00940000155908.b.y.a	ENSGT01010000229699	ENSGT00940000155908.b.z	ENSGT00390000016717.e	ENSGT00950000182970.B	ENSGT00940000157200.y	ENSGT01050000244857.A.a.a.d	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212.f	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT00390000009899.b.n.f	ENSGT00940000154688.a.b.b.f
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00620000087961.a.a.b	ENSGT00940000155209.lb.g.a.b	ENSGT00940000156019.c.a.d	ENSGT00940000159260.g.c	ENSGT01060000248920.a	ENSGT00550000074976.l	ENSGT01030000237278	ENSGT00530000064743.a.f	ENSGT00730000111591.a.d	ENSGT00940000154156.c.a.g	ENSGT00940000165999.d	ENSGT00940000156149.A	ENSGT00390000000510	ENSGT01010000222360.E.c.q	ENSGT00940000155394.i.b.m #18	ENSGT00940000160698.b #22	ENSGT00940000167492.g	ENSGT00940000155908.b.y.a	ENSGT00940000155908.b.z	ENSGT00390000016717.e	ENSGT00950000182970.B	ENSGT00940000157200.y	ENSGT01050000244857.A.a.a.d	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212.f	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT00390000009899.b.n.f	ENSGT00940000154688.a.b.b.f	ENSGT00940000160243
Coho salmon	MODERN SPECIES	14	ENSOKIG00005014556	CACNA2D1 (ENSOKIG00005014910)	HGF (ENSOKIG00005015882)	lrrc4.2 (ENSOKIG00005015942)	ENSOKIG00005015947	ENSOKIG00005015950	ENSOKIG00005015959	ENSOKIG00005015972	ENSOKIG00005015979	impdh1a (ENSOKIG00005015999)	ENSOKIG00005016137	ENSOKIG00005016159	ENSOKIG00005016168	ENSOKIG00005016188	ENSOKIG00005016199 #18	OTOGL (ENSOKIG00005016221) #22	ENSOKIG00005016435	IQSEC3 (ENSOKIG00005016535)	ENSOKIG00005016552	wash1 (ENSOKIG00005016564)	ddx11 (ENSOKIG00005016733)	fkbp4 (ENSOKIG00005016990)	ENSOKIG00005019060	tnni1c (ENSOKIG00005019505)	c2cd5 (ENSOKIG00005019703)	lmf2a (ENSOKIG00005023382)	miox (ENSOKIG00005023494)	ADM2 (ENSOKIG00005023716)	PPP6R2 (ENSOKIG00005023734)	dnaja2b (ENSOKIG00005023856)	ENSOKIG00005024110
Chinook salmon	MODERN SPECIES	10	ENSOTSG00005025747	CACNA2D1 (ENSOTSG00005025754)	HGF (ENSOTSG00005025764)	lrrc4.2 (ENSOTSG00005025769)	ENSOTSG00005025774	rbm28 (ENSOTSG00005025776)	ENSOTSG00005025778	ENSOTSG00005025780	ENSOTSG00005025782	IMPDH1 (ENSOTSG00005025796)	gcsha (ENSOTSG00005027453)	ENSOTSG00005027454	ENSOTSG00005027455	ENSOTSG00005027456	ENSOTSG00005027457 #18	OTOGL (ENSOTSG00005027458) #22	ENSOTSG00005034428	ENSOTSG00005034448	wash1 (ENSOTSG00005034481)	ddx11 (ENSOTSG00005034572)	fkbp4 (ENSOTSG00005034589)	ENSOTSG00005034597	tnni1c (ENSOTSG00005034664)	ENSOTSG00005034665	c2cd5 (ENSOTSG00005034683)	lmf2a (ENSOTSG00005039837)	miox (ENSOTSG00005039851)	ADM2 (ENSOTSG00005039882)	PPP6R2 (ENSOTSG00005039883)	dnaja2b (ENSOTSG00005039952)	cd9a (ENSOTSG00005039992)
Rainbow trout	MODERN SPECIES	11	CACNA2D1 (ENSOMYG00000023217)	HGF (ENSOMYG00000023379)	ENSOMYG00000055236	lrrc4.2 (ENSOMYG00000023489)	lep (ENSOMYG00000023515)	ENSOMYG00000023568	ENSOMYG00000050335	ENSOMYG00000055771	ENSOMYG00000023597	IMPDH1 (ENSOMYG00000023786)	ENSOMYG00000024278	ENSOMYG00000024293	ENSOMYG00000024301	ENSOMYG00000024327	ENSOMYG00000024356 #18	ENSOMYG00000024767 #22	ENSOMYG00000056387	ENSOMYG00000050936	ENSOMYG00000062352	wash1 (ENSOMYG00000025521)	ddx11 (ENSOMYG00000026110)	fkbp4 (ENSOMYG00000026619)	ENSOMYG00000028875	tnni1c (ENSOMYG00000028916)	c2cd5 (ENSOMYG00000029143)	lmf2a (ENSOMYG00000029508)	miox (ENSOMYG00000029635)	ENSOMYG00000029731	ADM2 (ENSOMYG00000029745)	PPP6R2 (ENSOMYG00000029763)	dnaja2b (ENSOMYG00000051387)
Salmo	ANCESTRAL SPECIES	9	ENSGT00620000087961.a.a.a	ENSGT00940000155209.lb.g.b	ENSGT00940000156019.c.a.c	ENSGT00940000159260.g.d	ENSGT01060000248920.b	ENSGT00550000074976.k.b	ENSGT00530000064743.a.e	ENSGT00730000111591.a.c	ENSGT00940000154156.c.a.h	ENSGT00940000164357.a	ENSGT00940000166153	ENSGT00940000156149.A	ENSGT00390000000510	ENSGT01010000222360.E.c.q	ENSGT00940000155394.i.b.m.a #18	ENSGT00940000160698.b #22	ENSGT00940000167492.g	ENSGT00940000155908.b.y.a	ENSGT00940000155908.b.z	ENSGT00390000016717.e	ENSGT00950000182970.B	ENSGT00940000157200.y.b	ENSGT01050000244857.A.a.a.d	ENSGT01030000234588.b.b.a.a.g	ENSGT00390000000212.f.a	ENSGT00530000063702.a.a.e	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT00390000009899.b.n.f.a	ENSGT00940000154688.a.b.b.f.b	ENSGT00940000160243
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	8	zc3hf (ENSSSAG00000056593)	sema3ab (ENSSSAG00000088799)	sema3e (ENSSSAG00000093380)	ENSSSAG00000083616	CACNA2D1 (ENSSSAG00000040218)	HGF (ENSSSAG00000047982)	lrrc4.2 (ENSSSAG00000118341)	ENSSSAG00000090687	ENSSSAG00000106753	ENSSSAG00000088337	ENSSSAG00000048471	ENSSSAG00000104178	gtf3c6 (ENSSSAG00000095233)	ENSSSAG00000049973	ENSSSAG00000083332 #18	ENSSSAG00000091928 #22	ENSSSAG00000105437	ENSSSAG00000116954	ENSSSAG00000108569	wash1 (ENSSSAG00000112811)	ddx11 (ENSSSAG00000051092)	fkbp4 (ENSSSAG00000099561)	ENSSSAG00000095297	ENSSSAG00000051476	tnni1c (ENSSSAG00000093685)	c2cd5 (ENSSSAG00000113213)	miox (ENSSSAG00000110651)	lmf2a (ENSSSAG00000112836)	ADM2 (ENSSSAG00000092589)	ENSSSAG00000064423	ENSSSAG00000104308
Atlantic salmon	MODERN SPECIES	1	sema3d (ENSSSAG00000078958)	sema3ab (ENSSSAG00000006417)	sema3e (ENSSSAG00000015762)	ENSSSAG00000113429	ENSSSAG00000038393	CACNA2D1 (ENSSSAG00000095335)	HGF (ENSSSAG00000104250)	lrrc4.2 (ENSSSAG00000119398)	ENSSSAG00000095549	ENSSSAG00000048333	ENSSSAG00000002340	ENSSSAG00000049923	ENSSSAG00000049952	ENSSSAG00000114404	ENSSSAG00000120434 #18	ENSSSAG00000050091 #22	ENSSSAG00000050614	ENSSSAG00000114372	wash1 (ENSSSAG00000050658)	ddx11 (ENSSSAG00000094143)	fkbp4 (ENSSSAG00000051318)	tnni1c (ENSSSAG00000051692)	c2cd5 (ENSSSAG00000051950)	lmf2a (ENSSSAG00000061031)	miox (ENSSSAG00000064272)	ADM2 (ENSSSAG00000085234)	PPP6R2 (ENSSSAG00000082593)	dnaja2b (ENSSSAG00000070822)	ENSSSAG00000070953	ENSSSAG00000108004	ENSSSAG00000092991
River trout	MODERN SPECIES	37	sema3e (ENSSTUG00000034352)	ENSSTUG00000033982	CACNA2D1 (ENSSTUG00000033613)	HGF (ENSSTUG00000033453)	lrrc4.2 (ENSSTUG00000033438)	ENSSTUG00000033426	ENSSTUG00000033423	ENSSTUG00000033413	ENSSTUG00000033408	impdh1a (ENSSTUG00000033085)	gcsha (ENSSTUG00000033067)	ENSSTUG00000033058	ENSSTUG00000033053	ENSSTUG00000033039	ENSSTUG00000033030 #18	OTOGL (ENSSTUG00000032890) #22	IQSEC3 (ENSSTUG00000032664)	wash1 (ENSSTUG00000032216)	ddx11 (ENSSTUG00000031226)	fkbp4 (ENSSTUG00000030386)	B4GALNT3 (ENSSTUG00000029346)	tnni1c (ENSSTUG00000031882)
Huchen	MODERN SPECIES	2113					ENSHHUG00000022800	ENSHHUG00000022812	ENSHHUG00000022815	ENSHHUG00000022818	IMPDH1 (ENSHHUG00000022823)	gcsha (ENSHHUG00000022944)	ENSHHUG00000022954	ENSHHUG00000022957	ENSHHUG00000022961	ENSHHUG00000022980	ENSHHUG00000022999 #18	OTOGL (ENSHHUG00000023037) #22	ENSHHUG00000023104	wash1 (ENSHHUG00000023115)	ddx11 (ENSHHUG00000023125)	fkbp4 (ENSHHUG00000023151)	B4GALNT3 (ENSHHUG00000023482)	tnni1c (ENSHHUG00000023496)	c2cd5 (ENSHHUG00000023503)	lmf2a (ENSHHUG00000023576)	miox (ENSHHUG00000023778)
Acanthomorphata	ANCESTRAL SPECIES	4	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495	ENSGT00940000154688.a.b.b
Cod	MODERN SPECIES	22	ENSGMOG00000032612	mef2aa (ENSGMOG00000015431)	ENSGMOG00000026749	ENSGMOG00000015381	igf1ra (ENSGMOG00000015335)	ENSGMOG00000023120	ENSGMOG00000015286	ENSGMOG00000033152	cers3b (ENSGMOG00000015263)	ANO2 (ENSGMOG00000015196)	ENSGMOG00000024913	vwf (ENSGMOG00000015064)	cd9a (ENSGMOG00000015042)	ENSGMOG00000031723	ENSGMOG00000008570 #18	ENSGMOG00000014855 #22	ENSGMOG00000025767	ENSGMOG00000029964	ENSGMOG00000014687	ENSGMOG00000016320	ENSGMOG00000034862	ENSGMOG00000016333	cnot2 (ENSGMOG00000016382)	ENSGMOG00000020359	ENSGMOG00000016402	fnbp4 (ENSGMOG00000016410)	agbl2 (ENSGMOG00000016458)	tmem17 (ENSGMOG00000016564)	ENSGMOG00000016574	ccdc34 (ENSGMOG00000016587)	ENSGMOG00000016598
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n
Pinecone sodierfish	MODERN SPECIES	20	MCTP2 (ENSMMDG00005012971)	mef2aa (ENSMMDG00005012981)	ENSMMDG00005013143	synm (ENSMMDG00005013262)	ENSMMDG00005013265	igf1ra (ENSMMDG00005013270)	ENSMMDG00005013271	cfap161 (ENSMMDG00005013272)	cers3b (ENSMMDG00005013277)	ENSMMDG00005013297	ENSMMDG00005013299	ENSMMDG00005013306	cd9a (ENSMMDG00005013314)	ENSMMDG00005013326	ENSMMDG00005013334 #18	OTOGL (ENSMMDG00005013346) #22	ENSMMDG00005013354	ENSMMDG00005013358	ENSMMDG00005013368	wash1 (ENSMMDG00005013374)	ddx11 (ENSMMDG00005013416)	fkbp4 (ENSMMDG00005014705)	B4GALNT3 (ENSMMDG00005014721)	tnni1c (ENSMMDG00005014728)	c2cd5 (ENSMMDG00005014752)	lmf2a (ENSMMDG00005014848)	miox (ENSMMDG00005014880)	ADM2 (ENSMMDG00005014884)	ENSMMDG00005014886	PPP6R2 (ENSMMDG00005014900)	dnaja2b (ENSMMDG00005014977)
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n
Tiger tail seahorse	MODERN SPECIES	394								ENSHCOG00000017697	cfap161 (ENSHCOG00000017606)	cers3b (ENSHCOG00000017559)	ANO2 (ENSHCOG00000017295)	vwf (ENSHCOG00000017149)	cd9a (ENSHCOG00000017035)	ENSHCOG00000017015	ENSHCOG00000016988 #18	OTOGL (ENSHCOG00000016963) #22	ENSHCOG00000016847	ENSHCOG00000016827	ENSHCOG00000016692	wash1 (ENSHCOG00000016683)	ddx11 (ENSHCOG00000016657)	fkbp4 (ENSHCOG00000016612)	ENSHCOG00000016607	B4GALNT3 (ENSHCOG00000016546)	c2cd5 (ENSHCOG00000000462)	lmf2a (ENSHCOG00000000460)
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
Oryzias	ANCESTRAL SPECIES	16	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
Indian medaka	MODERN SPECIES	15	synm (ENSOMEG00000006009)	ENSOMEG00000006018	igf1ra (ENSOMEG00000006084)	ENSOMEG00000006108	cfap161 (ENSOMEG00000006124)	cers3b (ENSOMEG00000006160)	ENSOMEG00000006175	ENSOMEG00000006188	ENSOMEG00000006199	ENSOMEG00000006217	ENSOMEG00000006233	ENSOMEG00000006259	cd9a (ENSOMEG00000006285)	ENSOMEG00000006293	ENSOMEG00000006338 #18	OTOGL (ENSOMEG00000006482) #22	ENSOMEG00000006505	ENSOMEG00000006517	ENSOMEG00000006529	IQSEC3 (ENSOMEG00000006565)	wash1 (ENSOMEG00000006586)	ddx11 (ENSOMEG00000006612)	fkbp4 (ENSOMEG00000006643)	B4GALNT3 (ENSOMEG00000006673)	c2cd5 (ENSOMEG00000006711)	lmf2a (ENSOMEG00000006731)	miox (ENSOMEG00000006753)	ADM2 (ENSOMEG00000006772)	ENSOMEG00000006815	PPP6R2 (ENSOMEG00000006880)	ENSOMEG00000006895
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT01080000257495.c.b	ENSGT00940000160243
Japanese Medaka HdrR	MODERN SPECIES	20	nr2f2 (ENSORLG00000008429)	ENSORLG00000008458	mef2aa (ENSORLG00000008489)	synm (ENSORLG00000008497)	ENSORLG00000024147	igf1ra (ENSORLG00000008532)	ENSORLG00000008549	cfap161 (ENSORLG00000008557)	cers3b (ENSORLG00000023203)	ENSORLG00000008575	ENSORLG00000027716	vwf (ENSORLG00000008677)	cd9a (ENSORLG00000008738)	ENSORLG00000030069	ENSORLG00000008768 #18	ENSORLG00000026155 #22	ENSORLG00000022622	ENSORLG00000008853	ENSORLG00000008881	wash1 (ENSORLG00000008908)	ddx11 (ENSORLG00000008936)	fkbp4 (ENSORLG00000008977)	ENSORLG00000009004	c2cd5 (ENSORLG00000009069)	lmf2a (ENSORLG00000009109)	miox (ENSORLG00000022873)	adm2 (ENSORLG00000009147)	ENSORLG00000009155	PPP6R2 (ENSORLG00000009217)	dnaja2b (ENSORLG00000009254)	ENSORLG00000026056
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
Aplocheiloidei	ANCESTRAL SPECIES	1	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT00940000160243
Mangrove rivulus	MODERN SPECIES	6	nr2f2 (ENSKMAG00000015717)	ENSKMAG00000015682	mef2aa (ENSKMAG00000015546)	TTC23 (ENSKMAG00000015468)	synm (ENSKMAG00000015444)	ENSKMAG00000015417	igf1ra (ENSKMAG00000015332)	ENSKMAG00000015298	cfap161 (ENSKMAG00000015273)	cers3b (ENSKMAG00000015238)	ANO2 (ENSKMAG00000015137)	vwf (ENSKMAG00000014966)	cd9a (ENSKMAG00000014873)	ENSKMAG00000014828	ENSKMAG00000014791 #18	OTOGL (ENSKMAG00000014696) #22	ENSKMAG00000014668	ENSKMAG00000014597	IQSEC3 (ENSKMAG00000014557)	wash1 (ENSKMAG00000014511)	ddx11 (ENSKMAG00000014450)	fkbp4 (ENSKMAG00000014406)	B4GALNT3 (ENSKMAG00000014375)	c2cd5 (ENSKMAG00000014328)	lmf2a (ENSKMAG00000014290)	miox (ENSKMAG00000014261)	ADM2 (ENSKMAG00000014243)	ENSKMAG00000014203	PPP6R2 (ENSKMAG00000014127)	dnaja2b (ENSKMAG00000014076)	ENSKMAG00000014060
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
Poecilia	ANCESTRAL SPECIES	5	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b
NAME_6	ANCESTRAL SPECIES	26		ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495.c.b	ENSGT00940000154688.a.b.b	ENSGT00940000160243
Amazon molly	MODERN SPECIES	265		ENSPFOG00000019209	mef2aa (ENSPFOG00000019202)	TTC23 (ENSPFOG00000019200)	synm (ENSPFOG00000019198)	PGPEP1L (ENSPFOG00000024508)	igf1ra (ENSPFOG00000019184)	ENSPFOG00000019170	ENSPFOG00000022648	cers3b (ENSPFOG00000019166)	ANO2 (ENSPFOG00000019147)	vwf (ENSPFOG00000019119)	cd9a (ENSPFOG00000019107)	ENSPFOG00000019097	ENSPFOG00000019093 #18	OTOGL (ENSPFOG00000019067) #22	ENSPFOG00000019026	IQSEC3 (ENSPFOG00000018979)	wash1 (ENSPFOG00000018970)	ddx11 (ENSPFOG00000018929)	fkbp4 (ENSPFOG00000018881)	B4GALNT3 (ENSPFOG00000018828)	c2cd5 (ENSPFOG00000018794)	lmf2a (ENSPFOG00000018767)	miox (ENSPFOG00000018753)	ADM2 (ENSPFOG00000023168)	ENSPFOG00000018749	ENSPFOG00000024613	PPP6R2 (ENSPFOG00000018710)	dnaja2b (ENSPFOG00000018692)	KCP (ENSPFOG00000018664)
Sailfin molly	MODERN SPECIES	2154																OTOGL (ENSPLAG00000014401) #22	ENSPLAG00000014657
Guppy	MODERN SPECIES	458	ENSPREG00000006337	mef2aa (ENSPREG00000006266)	TTC23 (ENSPREG00000006235)	synm (ENSPREG00000006229)	PGPEP1L (ENSPREG00000006211)	igf1ra (ENSPREG00000006183)	ENSPREG00000006156	ENSPREG00000006131	cers3b (ENSPREG00000006120)	ANO2 (ENSPREG00000006076)	ENSPREG00000006054	ENSPREG00000006037	cd9a (ENSPREG00000005943)	ENSPREG00000005922	ENSPREG00000005894 #18	OTOGL (ENSPREG00000005746) #22	ENSPREG00000005724	ENSPREG00000005685	ENSPREG00000005664	wash1 (ENSPREG00000005633)	ddx11 (ENSPREG00000005612)	fkbp4 (ENSPREG00000005588)	B4GALNT3 (ENSPREG00000005558)	c2cd5 (ENSPREG00000005347)	lmf2a (ENSPREG00000005302)	miox (ENSPREG00000005240)	ADM2 (ENSPREG00000005222)	ENSPREG00000005165	ENSPREG00000005147	PPP6R2 (ENSPREG00000005100)	ENSPREG00000005083
Platyfish	MODERN SPECIES	11	nr2f2 (ENSXMAG00000014103)	ENSXMAG00000009271	mef2aa (ENSXMAG00000029609)	TTC23 (ENSXMAG00000003704)	synm (ENSXMAG00000003710)	ENSXMAG00000025552	igf1ra (ENSXMAG00000003717)	ENSXMAG00000017827	cfap161 (ENSXMAG00000003746)	cers3b (ENSXMAG00000023244)	ANO2 (ENSXMAG00000003764)	vwf (ENSXMAG00000003784)	cd9a (ENSXMAG00000003798)	ENSXMAG00000028027	ENSXMAG00000003808 #18	ENSXMAG00000030010 #22	ENSXMAG00000003867	IQSEC3 (ENSXMAG00000003890)	wash1 (ENSXMAG00000003916)	ddx11 (ENSXMAG00000003929)	fkbp4 (ENSXMAG00000003963)	ENSXMAG00000003989	c2cd5 (ENSXMAG00000004004)	lmf2a (ENSXMAG00000004047)	miox (ENSXMAG00000004061)	ADM2 (ENSXMAG00000004075)	ENSXMAG00000004076	PPP6R2 (ENSXMAG00000004084)	dnaja2b (ENSXMAG00000004107)	ENSXMAG00000026145	ENSXMAG00000027237
NAME_4	ANCESTRAL SPECIES	39	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f.h	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT00940000160243	ENSGT00960000187354
Sheepshead minnow	MODERN SPECIES	411															ENSCVAG00000005722 #18	OTOGL (ENSCVAG00000005695) #22	ENSCVAG00000005571	ENSCVAG00000004857	wash1 (ENSCVAG00000004835)	ddx11 (ENSCVAG00000004796)	B4GALNT3 (ENSCVAG00000004742)	c2cd5 (ENSCVAG00000004677)	lmf2a (ENSCVAG00000004426)	miox (ENSCVAG00000000125)	ADM2 (ENSCVAG00000004381)	ENSCVAG00000004372	PPP6R2 (ENSCVAG00000004326)	dnaja2b (ENSCVAG00000004292)	ENSCVAG00000004270	ENSCVAG00000004217	ENSCVAG00000004208
Mummichog	MODERN SPECIES	2320	ENSFHEG00000004731	ENSFHEG00000004682	mef2aa (ENSFHEG00000004666)	synm (ENSFHEG00000004554)	PGPEP1L (ENSFHEG00000004545)	igf1ra (ENSFHEG00000004520)	ENSFHEG00000004438	cfap161 (ENSFHEG00000004419)	cers3b (ENSFHEG00000004377)	ANO2 (ENSFHEG00000004340)	ENSFHEG00000004320	vwf (ENSFHEG00000004280)	cd9a (ENSFHEG00000004144)	ENSFHEG00000004113	ENSFHEG00000004090 #18	ENSFHEG00000004083 #22	ENSFHEG00000004073	ENSFHEG00000004061	ENSFHEG00000003986	wash1 (ENSFHEG00000003974)	ddx11 (ENSFHEG00000003962)	fkbp4 (ENSFHEG00000003887)	c2cd5 (ENSFHEG00000003861)	ENSFHEG00000003830	lmf2a (ENSFHEG00000003826)	miox (ENSFHEG00000003800)	ADM2 (ENSFHEG00000003784)	ENSFHEG00000003776	PPP6R2 (ENSFHEG00000003755)	dnaja2b (ENSFHEG00000003748)	ENSFHEG00000003723
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00950000183112.a	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00950000183112.a	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000160583	ENSGT01100000263664.b.a	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00940000160583	ENSGT01100000263664.b.a	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Haplochromini_B	ANCESTRAL SPECIES	28	ENSGT00940000160583	ENSGT01100000263664.b.a	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Zebra mbuna	MODERN SPECIES	1110	lysmd4 (ENSMZEG00005021324)	ENSMZEG00005021320	nr2f2 (ENSMZEG00005021316)	ENSMZEG00005021310	mef2aa (ENSMZEG00005021299)	synm (ENSMZEG00005021288)	ENSMZEG00005021285	igf1ra (ENSMZEG00005021278)	cfap161 (ENSMZEG00005021271)	cers3b (ENSMZEG00005021267)	ANO2 (ENSMZEG00005021258)	vwf (ENSMZEG00005021239)	cd9a (ENSMZEG00005020211)	ENSMZEG00005020195	ENSMZEG00005020187 #18	OTOGL (ENSMZEG00005020165) #22	ENSMZEG00005020153	ENSMZEG00005020146	ENSMZEG00005020145	ENSMZEG00005020140	wash1 (ENSMZEG00005020132)	ddx11 (ENSMZEG00005020109)	fkbp4 (ENSMZEG00005020093)	B4GALNT3 (ENSMZEG00005020081)	tnni1c (ENSMZEG00005020074)	c2cd5 (ENSMZEG00005020066)	lmf2a (ENSMZEG00005020049)	miox (ENSMZEG00005020038)	ADM2 (ENSMZEG00005020032)	ENSMZEG00005020027	PPP6R2 (ENSMZEG00005020015)
Eastern happy	MODERN SPECIES	19	ENSACLG00000021472	nr2f2 (ENSACLG00000021486)	ENSACLG00000021565	mef2aa (ENSACLG00000021682)	ENSACLG00000021871	synm (ENSACLG00000021881)	ENSACLG00000021901	igf1ra (ENSACLG00000021919)	cfap161 (ENSACLG00000022028)	cers3b (ENSACLG00000022045)	ANO2 (ENSACLG00000022109)	vwf (ENSACLG00000022187)	cd9a (ENSACLG00000022342)	ENSACLG00000022366	ENSACLG00000022382 #18	OTOGL (ENSACLG00000022514) #22	ENSACLG00000022620	ENSACLG00000022673	IQSEC3 (ENSACLG00000022970)	wash1 (ENSACLG00000023001)	ddx11 (ENSACLG00000023040)	fkbp4 (ENSACLG00000023200)	B4GALNT3 (ENSACLG00000023227)	tnni1c (ENSACLG00000023266)	c2cd5 (ENSACLG00000023330)	lmf2a (ENSACLG00000023718)	miox (ENSACLG00000023771)	ADM2 (ENSACLG00000023795)	ENSACLG00000023807	PPP6R2 (ENSACLG00000023841)	dnaja2b (ENSACLG00000023903)
P. nyererei	MODERN SPECIES	330	lysmd4 (ENSPNYG00000010220)	ENSPNYG00000010203	nr2f2 (ENSPNYG00000010176)	ENSPNYG00000010077	mef2aa (ENSPNYG00000009994)	synm (ENSPNYG00000009951)	PGPEP1L (ENSPNYG00000009943)	igf1ra (ENSPNYG00000009876)	cfap161 (ENSPNYG00000009833)	cers3b (ENSPNYG00000009746)	ANO2 (ENSPNYG00000009646)	vwf (ENSPNYG00000009311)	cd9a (ENSPNYG00000009249)	ENSPNYG00000009233	ENSPNYG00000009208 #18	OTOGL (ENSPNYG00000009050) #22	ENSPNYG00000009024	ENSPNYG00000008918	wash1 (ENSPNYG00000008862)	ddx11 (ENSPNYG00000008436)	fkbp4 (ENSPNYG00000008286)	B4GALNT3 (ENSPNYG00000008237)	c2cd5 (ENSPNYG00000008167)	lmf2a (ENSPNYG00000008138)	miox (ENSPNYG00000008102)	ADM2 (ENSPNYG00000008090)	ENSPNYG00000008064	PPP6R2 (ENSPNYG00000007951)	dnaja2b (ENSPNYG00000007921)	ENSPNYG00000007891	calub (ENSPNYG00000007871)
Burton s mouthbrooder	MODERN SPECIES	421	lysmd4 (ENSHBUG00000017760)	ENSHBUG00000017755	nr2f2 (ENSHBUG00000017737)	ENSHBUG00000017717	mef2aa (ENSHBUG00000017680)	synm (ENSHBUG00000017588)	ENSHBUG00000017575	igf1ra (ENSHBUG00000017562)	cfap161 (ENSHBUG00000017492)	cers3b (ENSHBUG00000017453)	ANO2 (ENSHBUG00000017414)	vwf (ENSHBUG00000017350)	cd9a (ENSHBUG00000017214)	ENSHBUG00000017209	ENSHBUG00000017194 #18	OTOGL (ENSHBUG00000017181) #22	ENSHBUG00000016994	ENSHBUG00000000485	wash1 (ENSHBUG00000000885)	ddx11 (ENSHBUG00000016478)	fkbp4 (ENSHBUG00000016387)	B4GALNT3 (ENSHBUG00000016333)	tnni1c (ENSHBUG00000016236)	c2cd5 (ENSHBUG00000016111)	lmf2a (ENSHBUG00000016018)	miox (ENSHBUG00000015978)	ADM2 (ENSHBUG00000015895)	ENSHBUG00000015886	PPP6R2 (ENSHBUG00000015857)	dnaja2b (ENSHBUG00000015836)	ENSHBUG00000000466
Lyretail cichlid	MODERN SPECIES	305	ENSNBRG00000020713	nr2f2 (ENSNBRG00000020733)	ENSNBRG00000020791	mef2aa (ENSNBRG00000020999)	synm (ENSNBRG00000021019)	PGPEP1L (ENSNBRG00000021032)	igf1ra (ENSNBRG00000021047)	cfap161 (ENSNBRG00000021088)	cers3b (ENSNBRG00000021110)	ANO2 (ENSNBRG00000021153)	vwf (ENSNBRG00000021266)	cd9a (ENSNBRG00000021366)	ENSNBRG00000021388	ENSNBRG00000021441 #18	ENSNBRG00000021455 #18	OTOGL (ENSNBRG00000021488) #22	ENSNBRG00000021593	ENSNBRG00000021637	ENSNBRG00000021848	wash1 (ENSNBRG00000021855)	ddx11 (ENSNBRG00000021884)	fkbp4 (ENSNBRG00000021937)	B4GALNT3 (ENSNBRG00000021981)	tnni1c (ENSNBRG00000022064)	c2cd5 (ENSNBRG00000022203)	lmf2a (ENSNBRG00000022258)	miox (ENSNBRG00000022318)	ADM2 (ENSNBRG00000022346)	ENSNBRG00000022353	PPP6R2 (ENSNBRG00000022401)	dnaja2b (ENSNBRG00000022438)
Midas cichlid	MODERN SPECIES	385	lysmd4 (ENSACIG00000023559)	nr2f2 (ENSACIG00000023557)	ENSACIG00000023507	mef2aa (ENSACIG00000023491)	ENSACIG00000023488	ENSACIG00000023484	PGPEP1L (ENSACIG00000023469)	igf1ra (ENSACIG00000023462)	cfap161 (ENSACIG00000023454)	cers3b (ENSACIG00000023372)	ANO2 (ENSACIG00000023359)	vwf (ENSACIG00000023236)	cd9a (ENSACIG00000023059)	ENSACIG00000023003	ENSACIG00000022976 #18	OTOGL (ENSACIG00000022912) #22	ENSACIG00000022899	ENSACIG00000022866	IQSEC3 (ENSACIG00000022824)	wash1 (ENSACIG00000022808)	ddx11 (ENSACIG00000022787)	fkbp4 (ENSACIG00000022780)	B4GALNT3 (ENSACIG00000022768)	tnni1c (ENSACIG00000022717)	c2cd5 (ENSACIG00000022688)	lmf2a (ENSACIG00000022667)	miox (ENSACIG00000022653)	ADM2 (ENSACIG00000022650)	ENSACIG00000022637	PPP6R2 (ENSACIG00000022627)	dnaja2b (ENSACIG00000022612)
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Pomacentridae_A	ANCESTRAL SPECIES	9	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Amphiprion	ANCESTRAL SPECIES	4	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b.g
Orange clownfish	MODERN SPECIES	18	lysmd4 (ENSAPEG00000016599)	nr2f2 (ENSAPEG00000016561)	ENSAPEG00000016136	mef2aa (ENSAPEG00000016007)	synm (ENSAPEG00000015974)	PGPEP1L (ENSAPEG00000015958)	igf1ra (ENSAPEG00000015850)	ENSAPEG00000015782	cfap161 (ENSAPEG00000015750)	cers3b (ENSAPEG00000015701)	ENSAPEG00000015657	vwf (ENSAPEG00000015482)	cd9a (ENSAPEG00000015396)	ENSAPEG00000015374	ENSAPEG00000015327 #18	OTOGL (ENSAPEG00000015020) #22	ENSAPEG00000014972	ENSAPEG00000014835	IQSEC3 (ENSAPEG00000014760)	wash1 (ENSAPEG00000014721)	ddx11 (ENSAPEG00000014634)	fkbp4 (ENSAPEG00000014582)	B4GALNT3 (ENSAPEG00000014508)	tnni1c (ENSAPEG00000014478)	c2cd5 (ENSAPEG00000014237)	lmf2a (ENSAPEG00000014185)	miox (ENSAPEG00000014153)	ADM2 (ENSAPEG00000014142)	ENSAPEG00000014097	PPP6R2 (ENSAPEG00000014064)	dnaja2b (ENSAPEG00000014013)
Clown anemonefish	MODERN SPECIES	1277						ENSAOCG00000007743	igf1ra (ENSAOCG00000000439)	ENSAOCG00000007843	cfap161 (ENSAOCG00000007859)	cers3b (ENSAOCG00000007896)	ANO2 (ENSAOCG00000007980)	vwf (ENSAOCG00000008133)	cd9a (ENSAOCG00000008161)	ENSAOCG00000008186	ENSAOCG00000008218 #18	OTOGL (ENSAOCG00000008472) #22	ENSAOCG00000008511	ENSAOCG00000008601	IQSEC3 (ENSAOCG00000008658)	wash1 (ENSAOCG00000008685)	ddx11 (ENSAOCG00000008779)	fkbp4 (ENSAOCG00000008819)	B4GALNT3 (ENSAOCG00000000524)	tnni1c (ENSAOCG00000008854)	c2cd5 (ENSAOCG00000000527)	lmf2a (ENSAOCG00000008958)	miox (ENSAOCG00000008990)	ENSAOCG00000009014	trps1 (ENSAOCG00000009068)	clptm1l (ENSAOCG00000002628)	rplp1 (ENSAOCG00000009145)
Spiny chromis	MODERN SPECIES	119															ENSAPOG00000015159 #18	OTOGL (ENSAPOG00000000900) #22	ENSAPOG00000014833	ENSAPOG00000014510	wash1 (ENSAPOG00000014463)	ddx11 (ENSAPOG00000014400)	fkbp4 (ENSAPOG00000014254)	B4GALNT3 (ENSAPOG00000014191)	tnni1c (ENSAPOG00000014181)	c2cd5 (ENSAPOG00000014125)	lmf2a (ENSAPOG00000013873)	miox (ENSAPOG00000013863)	ADM2 (ENSAPOG00000013823)	ENSAPOG00000013813	PPP6R2 (ENSAPOG00000013766)	dnaja2b (ENSAPOG00000013756)	ENSAPOG00000013715
Bicolor damselfish	MODERN SPECIES	551						igf1ra (ENSSPAG00000012068)	ENSSPAG00000012020	cfap161 (ENSSPAG00000012002)	cers3b (ENSSPAG00000011979)	ANO2 (ENSSPAG00000011952)	ENSSPAG00000011928	vwf (ENSSPAG00000011831)	cd9a (ENSSPAG00000011773)	ENSSPAG00000011743	ENSSPAG00000011703 #18	ENSSPAG00000011693 #22	ENSSPAG00000011677	ENSSPAG00000011585	IQSEC3 (ENSSPAG00000011550)	ENSSPAG00000011510	ENSSPAG00000011495	sema3aa (ENSSPAG00000011388)	tspan11 (ENSSPAG00000011336)
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000159215 #23	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Ballan wrasse	MODERN SPECIES	40																OTOGL (ENSLBEG00000020259) #22	ENSLBEG00000020227	ENSLBEG00000020060	ENSLBEG00000019952	wash1 (ENSLBEG00000019900)	ddx11 (ENSLBEG00000019698)	fkbp4 (ENSLBEG00000019600)	B4GALNT3 (ENSLBEG00000019581)	tnni1c (ENSLBEG00000019552)	c2cd5 (ENSLBEG00000019481)	lmf2a (ENSLBEG00000019423)	miox (ENSLBEG00000019396)	ADM2 (ENSLBEG00000019381)	ENSLBEG00000019371	PPP6R2 (ENSLBEG00000019321)	dnaja2b (ENSLBEG00000019270)
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Perciformes	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000177018	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT00940000160243
Stickleback	MODERN SPECIES	14	lysmd4 (ENSGACG00000013238)	nr2f2 (ENSGACG00000013235)	ENSGACG00000013219	mef2aa (ENSGACG00000013182)	ENSGACG00000013177	ENSGACG00000013175	igf1ra (ENSGACG00000013170)	cfap161 (ENSGACG00000013167)	cers3b (ENSGACG00000013162)	ANO2 (ENSGACG00000013149)	vwf (ENSGACG00000013135)	cd9a (ENSGACG00000013122)	ENSGACG00000013120	ENSGACG00000013113 #18	ENSGACG00000013107	OTOGL (ENSGACG00000013089) #22	ENSGACG00000013064	IQSEC3 (ENSGACG00000013060)	wash1 (ENSGACG00000013049)	ddx11 (ENSGACG00000013030)	fkbp4 (ENSGACG00000012979)	B4GALNT3 (ENSGACG00000012971)	tnni1c (ENSGACG00000012962)	c2cd5 (ENSGACG00000012946)	lmf2a (ENSGACG00000012928)	miox (ENSGACG00000012900)	ADM2 (ENSGACG00000012899)	ENSGACG00000012891	PPP6R2 (ENSGACG00000012874)	dnaja2b (ENSGACG00000012845)	KCP (ENSGACG00000012835)
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Channel bull blenny	MODERN SPECIES	20	mef2aa (ENSCGOG00000009429)	TTC23 (ENSCGOG00000009420)	ENSCGOG00000009416	ENSCGOG00000009411	igf1ra (ENSCGOG00000004785)	ENSCGOG00000004682	cfap161 (ENSCGOG00000004638)	cers3b (ENSCGOG00000004620)	ENSCGOG00000004606	ENSCGOG00000004600	vwf (ENSCGOG00000003599)	cd9a (ENSCGOG00000003575)	ENSCGOG00000003570	ENSCGOG00000003569 #18	ENSCGOG00000003567 #18	OTOGL (ENSCGOG00000003551) #22	ENSCGOG00000003547	IQSEC3 (ENSCGOG00000003503)	wash1 (ENSCGOG00000003469)	ddx11 (ENSCGOG00000002638)	fkbp4 (ENSCGOG00000002296)	B4GALNT3 (ENSCGOG00000002269)	tnni1c (ENSCGOG00000002243)	c2cd5 (ENSCGOG00000001717)	lmf2a (ENSCGOG00000001450)	miox (ENSCGOG00000001434)	ADM2 (ENSCGOG00000001431)	ENSCGOG00000001429	PPP6R2 (ENSCGOG00000000839)	ENSCGOG00000000694	dnaja2b (ENSCGOG00000000612)
Pike perch	MODERN SPECIES	98	mef2aa (ENSSLUG00000022760)	ENSSLUG00000022775	TTC23 (ENSSLUG00000022777)	synm (ENSSLUG00000022781)	ENSSLUG00000022786	igf1ra (ENSSLUG00000023057)	cfap161 (ENSSLUG00000024767)	cers3b (ENSSLUG00000024770)	ENSSLUG00000024772	ENSSLUG00000024775	vwf (ENSSLUG00000024816)	cd9a (ENSSLUG00000024978)	ENSSLUG00000001512	ENSSLUG00000001523 #18	ENSSLUG00000001530 #18	OTOGL (ENSSLUG00000001616) #22	ENSSLUG00000001712	ENSSLUG00000001739	ENSSLUG00000001772	wash1 (ENSSLUG00000001782)	ddx11 (ENSSLUG00000001884)	fkbp4 (ENSSLUG00000002082)	tnni1c (ENSSLUG00000002115)	c2cd5 (ENSSLUG00000002166)	lmf2a (ENSSLUG00000002306)	miox (ENSSLUG00000002636)	ADM2 (ENSSLUG00000002654)	ENSSLUG00000002667	PPP6R2 (ENSSLUG00000002760)	dnaja2b (ENSSLUG00000003263)	ENSSLUG00000003325
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
European seabass	MODERN SPECIES	19	nr2f2 (ENSDLAG00005006290)	ENSDLAG00005006109	mef2aa (ENSDLAG00005005967)	TTC23 (ENSDLAG00005029088)	ENSDLAG00005005925	PGPEP1L (ENSDLAG00005005911)	igf1ra (ENSDLAG00005002853)	ENSDLAG00005002409	ENSDLAG00005002388	cers3b (ENSDLAG00005002321)	ANO2 (ENSDLAG00005002272)	vwf (ENSDLAG00005001829)	cd9a (ENSDLAG00005027910)	ENSDLAG00005001752 #18	ENSDLAG00005001764	ENSDLAG00005001599 #22	ENSDLAG00005001567	ENSDLAG00005024666	ENSDLAG00005024652	wash1 (ENSDLAG00005024645)	ddx11 (ENSDLAG00005024505)	fkbp4 (ENSDLAG00005024486)	ENSDLAG00005024478	tnni1c (ENSDLAG00005024465)	c2cd5 (ENSDLAG00005024401)	lmf2a (ENSDLAG00005024380)	miox (ENSDLAG00005024345)	ADM2 (ENSDLAG00005024338)	ENSDLAG00005034181	PPP6R2 (ENSDLAG00005024129)	dnaja2b (ENSDLAG00005024093)
Tetraodontidae	ANCESTRAL SPECIES	342																ENSGT00940000160698 #22	ENSGT00940000159215 #23
Tetraodon	MODERN SPECIES	4	nr2f2 (ENSTNIG00000000166)	nr2f2 (ENSTNIG00000001348)	ENSTNIG00000019232	mef2aa (ENSTNIG00000019231)	ENSTNIG00000019230	TTC23 (ENSTNIG00000019229)	synm (ENSTNIG00000019228)	igf1ra (ENSTNIG00000019227)	cfap161 (ENSTNIG00000001175)	cers3b (ENSTNIG00000019226)	ANO2 (ENSTNIG00000019225)	vwf (ENSTNIG00000019224)	cd9a (ENSTNIG00000019223)	ENSTNIG00000019222 #18	ENSTNIG00000019221	OTOGL (ENSTNIG00000019220) #22	ENSTNIG00000019219 #23	wash1 (ENSTNIG00000019217)	IQSEC3 (ENSTNIG00000019218)	ddx11 (ENSTNIG00000019216)	B4GALNT3 (ENSTNIG00000019215)	c2cd5 (ENSTNIG00000019214)	lmf2a (ENSTNIG00000019213)	miox (ENSTNIG00000019212)	ADM2 (ENSTNIG00000000994)	PPP6R2 (ENSTNIG00000019211)	dnaja2b (ENSTNIG00000019210)	ENSTNIG00000019209	ENSTNIG00000019208	calub (ENSTNIG00000019207)	GTF3C6 (ENSTNIG00000019206)
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Carangaria	ANCESTRAL SPECIES	6	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200.u.a	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200.u.a	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT01010000222360.E.c
Tongue sole	MODERN SPECIES	16	slc23a4 (ENSCSEG00000003583)	ENSCSEG00000003588	TMTC2 (ENSCSEG00000003594) #35	CRACR2A (ENSCSEG00000003612)	PRMT8 (ENSCSEG00000003619)	ENSCSEG00000003624	TSPAN9 (ENSCSEG00000003626)	tspan33b (ENSCSEG00000003633)	rgma (ENSCSEG00000003638)	nr2f2 (ENSCSEG00000003641)	chd2 (ENSCSEG00000003646)	slco3a1a (ENSCSEG00000003666)	vwf (ENSCSEG00000003695)	cd9a (ENSCSEG00000003858)	ENSCSEG00000003863	OTOGL (ENSCSEG00000003874) #22	ENSCSEG00000003901	IQSEC3 (ENSCSEG00000003939)	wash1 (ENSCSEG00000003949)	ddx11 (ENSCSEG00000003961)	fkbp4 (ENSCSEG00000003985)	ENSCSEG00000003994	c2cd5 (ENSCSEG00000004016)	lmf2a (ENSCSEG00000004030)	miox (ENSCSEG00000004038)	ADM2 (ENSCSEG00000004066)	ENSCSEG00000004070	ENSCSEG00000004076	dnaja2b (ENSCSEG00000004078)	ENSCSEG00000004083	ENSCSEG00000004087
Turbot	MODERN SPECIES	1	nr2f2 (ENSSMAG00000001895)	ENSSMAG00000024931	ENSSMAG00000001909	mef2aa (ENSSMAG00000001961)	synm (ENSSMAG00000002028)	ENSSMAG00000002044	igf1ra (ENSSMAG00000002101)	ENSSMAG00000002147	ENSSMAG00000002161	cers3b (ENSSMAG00000002185)	ANO2 (ENSSMAG00000002206)	vwf (ENSSMAG00000002256)	cd9a (ENSSMAG00000002351)	ENSSMAG00000002393	ENSSMAG00000002411 #18	ENSSMAG00000002436 #22	ENSSMAG00000002530	ENSSMAG00000002634	wash1 (ENSSMAG00000002713)	ddx11 (ENSSMAG00000002771)	fkbp4 (ENSSMAG00000002822)	ENSSMAG00000002877	tnni1c (ENSSMAG00000002906)	c2cd5 (ENSSMAG00000002930)	lmf2a (ENSSMAG00000003088)	miox (ENSSMAG00000003096)	ADM2 (ENSSMAG00000003128)	ENSSMAG00000003137	PPP6R2 (ENSSMAG00000003158)	dnaja2b (ENSSMAG00000003205)	calub (ENSSMAG00000034261)
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200.u.a	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Barramundi perch	MODERN SPECIES	97	nr2f2 (ENSLCAG00010006634)	ENSLCAG00010006673	mef2aa (ENSLCAG00010006701)	TTC23 (ENSLCAG00010006718)	synm (ENSLCAG00010006725)	PGPEP1L (ENSLCAG00010006729)	igf1ra (ENSLCAG00010007343)	ENSLCAG00010009614	cfap161 (ENSLCAG00010009616)	cers3b (ENSLCAG00010009623)	ANO2 (ENSLCAG00010009653)	vwf (ENSLCAG00010009725)	cd9a (ENSLCAG00010009837)	ENSLCAG00010009841	ENSLCAG00010009842 #18	OTOGL (ENSLCAG00010009853) #22	ENSLCAG00010009888	IQSEC3 (ENSLCAG00010009909)	wash1 (ENSLCAG00010009916)	ddx11 (ENSLCAG00010010019)	fkbp4 (ENSLCAG00010010350)	B4GALNT3 (ENSLCAG00010010392)	tnni1c (ENSLCAG00010010409)	c2cd5 (ENSLCAG00010010424)	lmf2a (ENSLCAG00010010460)	miox (ENSLCAG00010010470)	ADM2 (ENSLCAG00010010474)	ENSLCAG00010010475	PPP6R2 (ENSLCAG00010010533)	dnaja2b (ENSLCAG00010010654)	calub (ENSLCAG00010010707)
Seriola	ANCESTRAL SPECIES	5	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00940000163454.a.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200.u.a	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Greater amberjack	MODERN SPECIES	82	MCTP2 (ENSSDUG00000012092)	mef2aa (ENSSDUG00000012126)	TTC23 (ENSSDUG00000012169)	synm (ENSSDUG00000012177)	PGPEP1L (ENSSDUG00000012180)	igf1ra (ENSSDUG00000012197)	ENSSDUG00000012285	cfap161 (ENSSDUG00000012294)	cers3b (ENSSDUG00000012314)	ENSSDUG00000012337	ENSSDUG00000012362	vwf (ENSSDUG00000012407)	cd9a (ENSSDUG00000012530)	ENSSDUG00000012549	ENSSDUG00000012564 #18	OTOGL (ENSSDUG00000012590) #22	ENSSDUG00000012730	IQSEC3 (ENSSDUG00000012824)	wash1 (ENSSDUG00000012855)	ddx11 (ENSSDUG00000012889)	fkbp4 (ENSSDUG00000013003)	B4GALNT3 (ENSSDUG00000013036)	tnni1c (ENSSDUG00000013077)	c2cd5 (ENSSDUG00000013104)	lmf2a (ENSSDUG00000013158)	miox (ENSSDUG00000013180)	ADM2 (ENSSDUG00000013200)	ENSSDUG00000013217	PPP6R2 (ENSSDUG00000013247)	dnaja2b (ENSSDUG00000013297)	ENSSDUG00000013340
Yellowtail amberjack	MODERN SPECIES	2641		MCTP2 (ENSSLDG00000016290)	mef2aa (ENSSLDG00000016369)	TTC23 (ENSSLDG00000016486)	synm (ENSSLDG00000016510)	PGPEP1L (ENSSLDG00000016519)	igf1ra (ENSSLDG00000016537)	ENSSLDG00000016617	cfap161 (ENSSLDG00000016637)	cers3b (ENSSLDG00000016672)	ANO2 (ENSSLDG00000016720)	vwf (ENSSLDG00000016934)	cd9a (ENSSLDG00000017617)	ENSSLDG00000017646	ENSSLDG00000017686 #18	ENSSLDG00000017705 #22	ENSSLDG00000017715	ENSSLDG00000017827	ENSSLDG00000018370	wash1 (ENSSLDG00000018390)	ddx11 (ENSSLDG00000018470)	fkbp4 (ENSSLDG00000018585)	B4GALNT3 (ENSSLDG00000018635)	tnni1c (ENSSLDG00000018691)	c2cd5 (ENSSLDG00000018762)	miox (ENSSLDG00000019090)	ADM2 (ENSSLDG00000019142)	ENSSLDG00000019152	PPP6R2 (ENSSLDG00000019173)	dnaja2b (ENSSLDG00000019211)	ENSSLDG00000019272
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000177018	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT00940000165748.b
Zig-zag eel	MODERN SPECIES	20	lysmd4 (ENSMAMG00000027150)	nr2f2 (ENSMAMG00000009329)	ENSMAMG00000009351	mef2aa (ENSMAMG00000009369)	TTC23 (ENSMAMG00000009502)	synm (ENSMAMG00000009518)	PGPEP1L (ENSMAMG00000009527)	igf1ra (ENSMAMG00000009545)	ENSMAMG00000009685	cers3b (ENSMAMG00000009696)	ENSMAMG00000009779	vwf (ENSMAMG00000009852)	cd9a (ENSMAMG00000026334)	ENSMAMG00000010131	ENSMAMG00000010177 #18	ENSMAMG00000010219 #22	ENSMAMG00000010306	ENSMAMG00000010331	ENSMAMG00000010526	wash1 (ENSMAMG00000010562)	ddx11 (ENSMAMG00000010598)	fkbp4 (ENSMAMG00000010684)	ENSMAMG00000010703	c2cd5 (ENSMAMG00000010750)	lmf2a (ENSMAMG00000010878)	miox (ENSMAMG00000010886)	ADM2 (ENSMAMG00000010921)	ENSMAMG00000010933	ENSMAMG00000010952	ENSMAMG00000010975	ENSMAMG00000025706
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00940000160583	ENSGT00940000157540.A	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00530000063847.a	ENSGT00940000159268	ENSGT00390000015368.a.b	ENSGT00940000156682.e.b	ENSGT00390000018488	ENSGT01030000234515.a.b.a.b.b	ENSGT00940000155840.A	ENSGT00940000155810	ENSGT00940000155083.b.a.a	ENSGT00390000002417	ENSGT00940000155394.i.b #18	ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT00940000165748.b	ENSGT01010000222360.E.c
Climbing perch	MODERN SPECIES	19	nr2f2 (ENSATEG00000003471)	ENSATEG00000005182	mef2aa (ENSATEG00000005135)	TTC23 (ENSATEG00000005128)	synm (ENSATEG00000005115)	ENSATEG00000005043	igf1ra (ENSATEG00000004963)	ENSATEG00000004952	cers3b (ENSATEG00000004897)	ENSATEG00000028374	ENSATEG00000004782	vwf (ENSATEG00000004353)	cd9a (ENSATEG00000003995)	ENSATEG00000003953	ENSATEG00000003879 #18	ENSATEG00000003590 #22	ENSATEG00000003377	ENSATEG00000025982	wash1 (ENSATEG00000003299)	ddx11 (ENSATEG00000003156)	fkbp4 (ENSATEG00000003145)	ENSATEG00000003136	c2cd5 (ENSATEG00000003112)	lmf2a (ENSATEG00000003095)	miox (ENSATEG00000003031)	ADM2 (ENSATEG00000003001)	ENSATEG00000002957	PPP6R2 (ENSATEG00000002936)	dnaja2b (ENSATEG00000002885)	ENSATEG00000002861	calub (ENSATEG00000002832)
Otomorpha	ANCESTRAL SPECIES	321																ENSGT00940000160698 #22	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT01010000229699	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Otophysi	ANCESTRAL SPECIES	33	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159082	ENSGT00940000153725.a.b.a	ENSGT00940000156519.o	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000011262.e.b	ENSGT00940000156149.A	ENSGT00940000166153	ENSGT00940000165999	ENSGT00940000160698 #22	ENSGT00990000206491	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Characiphysae	ANCESTRAL SPECIES	25	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159082	ENSGT00940000153725.a.b.a	ENSGT00940000156519.o	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000011262.e.b	ENSGT00940000156149.A	ENSGT00940000166153	ENSGT00940000165999	ENSGT00940000160698 #22	ENSGT00990000206491	ENSGT00940000167492.d	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B.g	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Channel catfish	MODERN SPECIES	23	mvd (ENSIPUG00000007071)	pdcd5 (ENSIPUG00000007119)	ENSIPUG00000007225	ENSIPUG00000007242	CLEC18A (ENSIPUG00000007273)	ENSIPUG00000007303	PDPR (ENSIPUG00000007337)	Zdhhc7 (ENSIPUG00000007456)	nip7 (ENSIPUG00000007516)	cog8 (ENSIPUG00000007548)	nob1 (ENSIPUG00000007579)	wdr59 (ENSIPUG00000007601)	glg1 (ENSIPUG00000007707)	ENSIPUG00000007774	gcsha (ENSIPUG00000007808)	OTOGL (ENSIPUG00000007858) #22	ENSIPUG00000007942	ENSIPUG00000007986	ENSIPUG00000008306	ENSIPUG00000008364	wash1 (ENSIPUG00000008382)	ddx11 (ENSIPUG00000008500)	Fkbp4 (ENSIPUG00000008654)	ENSIPUG00000008707	ENSIPUG00000008710	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890)
Characiphysae_b	ANCESTRAL SPECIES	22	ENSGT00390000015359	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159082	ENSGT00940000153725.a.b.a	ENSGT00940000156519.o	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000011262.e.b	ENSGT00940000156149.A	ENSGT00940000166153	ENSGT00940000165999	ENSGT00940000160698 #22	ENSGT00990000206491	ENSGT00940000167492.d	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B.g	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b
Characoidei	ANCESTRAL SPECIES	13	ENSGT00390000002290	ENSGT00390000015359	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159082	ENSGT00940000156519.o	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000011262.e.b	ENSGT00940000156149.A	ENSGT00940000166153	ENSGT00940000165999	ENSGT00940000160698 #22	ENSGT00940000167492.d	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B.g	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT00940000154688.a.b.b	ENSGT01030000237885
Red-bellied piranha	MODERN SPECIES		mvda (ENSPNAG00000028013)	ENSPNAG00000027927	ENSPNAG00000027906	CLEC18A (ENSPNAG00000005313)	ENSPNAG00000005220	PDPR (ENSPNAG00000006069)	zdhhc7 (ENSPNAG00000027719)	nip7 (ENSPNAG00000027680)	cog8 (ENSPNAG00000027640)	NOB1 (ENSPNAG00000004244)	WDR59 (ENSPNAG00000027504)	glg1b (ENSPNAG00000004782)	ENSPNAG00000005515	ENSPNAG00000027067	gcsha (ENSPNAG00000005569)	OTOGL (ENSPNAG00000026963) #22	ENSPNAG00000026768	B4GALNT3 (ENSPNAG00000026450)	tnni1c (ENSPNAG00000026430)	c2cd5 (ENSPNAG00000026377)	lmf2a (ENSPNAG00000026271)	miox (ENSPNAG00000026257)	ADM2 (ENSPNAG00000004024)	ENSPNAG00000006549	PPP6R2 (ENSPNAG00000005207)	dnaja2b (ENSPNAG00000004014)	ENSPNAG00000006060	KCP (ENSPNAG00000026062)	ENSPNAG00000003949	calub (ENSPNAG00000025643)	utp15 (ENSPNAG00000025612)
Mexicana tetra	MODERN SPECIES	9	pdcd5 (ENSAMXG00000035216)	ENSAMXG00000031613	ENSAMXG00000032244	CLEC18A (ENSAMXG00000003606)	ENSAMXG00000003622	PDPR (ENSAMXG00000003624)	zdhhc7 (ENSAMXG00000003631)	nip7 (ENSAMXG00000003634)	cog8 (ENSAMXG00000003639)	NOB1 (ENSAMXG00000003642)	WDR59 (ENSAMXG00000003648)	glg1b (ENSAMXG00000003665)	ENSAMXG00000034166	ENSAMXG00000003688	gcsha (ENSAMXG00000003694)	OTOGL (ENSAMXG00000003708) #22	ENSAMXG00000003740	IQSEC3 (ENSAMXG00000003755)	wash1 (ENSAMXG00000003770)	ddx11 (ENSAMXG00000003800)	fkbp4 (ENSAMXG00000003846)	ENSAMXG00000030277	tnni1c (ENSAMXG00000003900)	c2cd5 (ENSAMXG00000003912)	lmf2a (ENSAMXG00000003926)	miox (ENSAMXG00000003957)	ADM2 (ENSAMXG00000003970)	ENSAMXG00000043614	PPP6R2 (ENSAMXG00000003997)	dnaja2b (ENSAMXG00000004014)	ENSAMXG00000037689
Electric eel	MODERN SPECIES	35	pdcd5 (ENSEEEG00000016650)	ENSEEEG00000016649	ENSEEEG00000016648	CLEC18A (ENSEEEG00000016642)	ENSEEEG00000016635	PDPR (ENSEEEG00000016546)	RGS9BP (ENSEEEG00000016537)	zdhhc7 (ENSEEEG00000016528)	nip7 (ENSEEEG00000016525)	cog8 (ENSEEEG00000016523)	NOB1 (ENSEEEG00000016518)	WDR59 (ENSEEEG00000016513)	glg1b (ENSEEEG00000015667)	ENSEEEG00000015639	gcsha (ENSEEEG00000015637)	OTOGL (ENSEEEG00000015624) #22	ENSEEEG00000015621	ENSEEEG00000015614	ENSEEEG00000015606	ENSEEEG00000015605	wash1 (ENSEEEG00000015603)	ddx11 (ENSEEEG00000015601)	ENSEEEG00000015600	fkbp4 (ENSEEEG00000015599)	B4GALNT3 (ENSEEEG00000015598)	tnni1c (ENSEEEG00000015597)	c2cd5 (ENSEEEG00000015592)	lmf2a (ENSEEEG00000015564)	miox (ENSEEEG00000015560)	ADM2 (ENSEEEG00000015559)	ENSEEEG00000015558
Cyprinoidei	ANCESTRAL SPECIES	10						ENSGT00940000153725.a.b.a	ENSGT00940000156519.o	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000011262.e.b	ENSGT00940000160537.y	ENSGT00940000166153	ENSGT00940000165999	ENSGT00940000160698 #22	ENSGT00990000206491	ENSGT00940000167492	ENSGT00940000155908.b	ENSGT00390000016717	ENSGT00950000182970.B.e	ENSGT00940000157200	ENSGT01050000244857.A.a.a	ENSGT01030000234588.b.b.a.a	ENSGT00390000000212	ENSGT00530000063702.a.a	ENSGT00390000016211	ENSGT00940000154380.a.a.a	ENSGT01050000244956.a.b	ENSGT00390000009899.b.n	ENSGT01080000257495
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	260					ENSGT00940000163723.A.f.b.b.b	ENSGT00940000153725.a.b.a	ENSGT00940000156519.o.b	ENSGT00950000182971.A.m	ENSGT00390000015893.e	ENSGT00390000015857.a	ENSGT00940000157600.d	ENSGT00390000011262.e.b.b	ENSGT00940000160537.y.b	ENSGT00940000166153	ENSGT00940000165999.b	ENSGT00940000160698.c #22	ENSGT00990000206491	ENSGT00940000167492	ENSGT00940000155908.b.a	ENSGT00390000016717.b	ENSGT00950000182970.B.e	ENSGT00940000157200.r	ENSGT01050000244857.A.a.a.b	ENSGT01030000234588.b.b.a.a.c	ENSGT00390000000212.c	ENSGT00530000063702.a.a.b	ENSGT00390000016211.b	ENSGT00940000154380.a.a.a.d	ENSGT01050000244956.a.b.c	ENSGT00390000009899.b.n.h	ENSGT00940000154688.a.b.b.b
Goldfish	MODERN SPECIES	450																OTOGL (ENSCARG00000045181) #22	IQSEC3 (ENSCARG00000045589)	wash1 (ENSCARG00000045761)	ddx11 (ENSCARG00000045798)	fkbp4 (ENSCARG00000046821)	ENSCARG00000047863	tnni1c (ENSCARG00000048385)	c2cd5 (ENSCARG00000048447)	lmf2a (ENSCARG00000049047)	ENSCARG00000049442	ENSCARG00000049461	ENSCARG00000049520	dnaja2b (ENSCARG00000049785)	ENSCARG00000049972	calub (ENSCARG00000049994)	utp15 (ENSCARG00000050015)
Cyprininae_a	ANCESTRAL SPECIES	70	ENSGT00390000015980.d	ENSGT00940000164637.ab.f	ENSGT00940000163723.A.e.g.a	ENSGT00940000163723.A.f.b.a.a.a	ENSGT00940000163723.A.f.b.b.a	ENSGT00940000153725.a.b.a.h	ENSGT00940000156519.o.b	ENSGT00950000182971.A.m	ENSGT00390000015893.e	ENSGT00390000015857.a	ENSGT00940000157600.d	ENSGT00390000011262.e.b.b	ENSGT00940000160537.y.b	ENSGT00940000166153	ENSGT00940000165999.b	ENSGT00940000160698.c #22	ENSGT00940000155908.b.a	ENSGT00390000016717.b	ENSGT00950000182970.B.e	ENSGT00940000157200.r	ENSGT01050000244857.A.a.a.b	ENSGT01030000234588.b.b.a.a.c	ENSGT00390000000212.c	ENSGT00530000063702.a.a.b	ENSGT00390000016211.b	ENSGT00940000154380.a.a.a.d	ENSGT01050000244956.a.b.c	ENSGT00390000009899.b.n.h	ENSGT00940000154688.a.b.b.b	ENSGT01080000257495.a.a	ENSGT01010000222360.E.c.n
Golden-line barbel	MODERN SPECIES	13	pdcd10a (ENSSGRG00000033123)	serpini1 (ENSSGRG00000033122)	ENSSGRG00000033121	ENSSGRG00000033120	ENSSGRG00000033110	RGS9BP (ENSSGRG00000033109)	zdhhc7 (ENSSGRG00000033107)	nip7 (ENSSGRG00000033106)	cog8 (ENSSGRG00000033105)	NOB1 (ENSSGRG00000033104)	WDR59 (ENSSGRG00000033031)	glg1b (ENSSGRG00000032887)	ENSSGRG00000032884	ENSSGRG00000032883	gcsha (ENSSGRG00000032882)	OTOGL (ENSSGRG00000032881) #22	ENSSGRG00000032880	ENSSGRG00000032879	ENSSGRG00000032876	wash1 (ENSSGRG00000032875)	ddx11 (ENSSGRG00000032872)	fkbp4 (ENSSGRG00000032797)	c2cd5 (ENSSGRG00000032770)	lmf2a (ENSSGRG00000032745)	miox (ENSSGRG00000032743)	ADM2 (ENSSGRG00000032742)	PPP6R2 (ENSSGRG00000032636)	dnaja2b (ENSSGRG00000032635)	utp15 (ENSSGRG00000032626)	ENSSGRG00000032625	cfap161 (ENSSGRG00000032623)
Common carp reference	MODERN SPECIES	9	ENSCCRG00000021716	ENSCCRG00000067834	ENSCCRG00000058521	ENSCCRG00000056704	ENSCCRG00000057421	ENSCCRG00000076253	zdhhc7 (ENSCCRG00000021801)	nip7 (ENSCCRG00000002701)	cog8 (ENSCCRG00000021820)	ENSCCRG00000002834	ENSCCRG00000011993	glg1b (ENSCCRG00000003114)	ENSCCRG00000078860	ENSCCRG00000002757	gcsha (ENSCCRG00000081895)	ENSCCRG00000002036 #22	ENSCCRG00000012863	wash1 (ENSCCRG00000042778)	ddx11 (ENSCCRG00000041966)	fkbp4 (ENSCCRG00000041945)	ENSCCRG00000032594	tnni1c (ENSCCRG00000011971)	c2cd5 (ENSCCRG00000011827)	lmf2a (ENSCCRG00000010088)	ADM2 (ENSCCRG00000011807)	ENSCCRG00000077820	ENSCCRG00000073192	dnaja2b (ENSCCRG00000047332)	ENSCCRG00000056574	calub (ENSCCRG00000009440)	utp15 (ENSCCRG00000009437)
Cyprininae	ANCESTRAL SPECIES	1126														ENSGT00940000160537.y.a	ENSGT00940000165999.a	ENSGT00940000160698.d #22
Goldfish	MODERN SPECIES	148														ENSCARG00000055661	gcsha (ENSCARG00000055678)	OTOGL (ENSCARG00000055724) #22	ENSCARG00000056577
Cyprininae_a	ANCESTRAL SPECIES	25	ENSGT00940000158168.l	ENSGT00390000015980.c	ENSGT00940000164637.ab.e	ENSGT00940000163723.A.e.g.b	ENSGT00940000163723.A.f.b.a.a.b	ENSGT00940000163723.A.f.b.b.b	ENSGT00940000153725.a.b.a.g	ENSGT00940000156519.o.a	ENSGT00950000182971.A.n	ENSGT00390000015893.f	ENSGT00390000015857.b	ENSGT00940000157600.c	ENSGT00390000011262.e.b.a	ENSGT00940000160537.y.a	ENSGT00940000165999.a	ENSGT00940000160698.d #22	ENSGT00990000206491	ENSGT00940000167492	ENSGT00940000155908.b.b	ENSGT00390000016717.a	ENSGT00950000182970.B.f	ENSGT00940000157200.q	ENSGT01050000244857.A.a.a.a	ENSGT01030000234588.b.b.a.a.d	ENSGT00390000000212.d	ENSGT00530000063702.a.a.a	ENSGT00390000016211.a	ENSGT00940000154380.a.a.a.c	ENSGT01050000244956.a.b.d	ENSGT00390000009899.b.n.g	ENSGT01080000257495.a.b
Common carp reference	MODERN SPECIES	19	serpini1 (ENSCCRG00000021656)	ENSCCRG00000055000	ENSCCRG00000021726	ENSCCRG00000021758	ENSCCRG00000054346	ENSCCRG00000021775	ENSCCRG00000065742	zdhhc7 (ENSCCRG00000055152)	nip7 (ENSCCRG00000021815)	cog8 (ENSCCRG00000002812)	ENSCCRG00000067608	ENSCCRG00000002936	glg1b (ENSCCRG00000008661)	ENSCCRG00000002742	gcsha (ENSCCRG00000068836)	ENSCCRG00000007168 #22	ENSCCRG00000007185	ENSCCRG00000007215	ENSCCRG00000042783	wash1 (ENSCCRG00000022814)	fkbp4 (ENSCCRG00000009121)	ENSCCRG00000072822	tnni1c (ENSCCRG00000032503)	c2cd5 (ENSCCRG00000044615)	miox (ENSCCRG00000010103)	lmf2a (ENSCCRG00000011809)	ADM2 (ENSCCRG00000010113)	ENSCCRG00000068435	ENSCCRG00000076979	ENSCCRG00000075294	dnaja2b (ENSCCRG00000072143)
Golden-line barbel	MODERN SPECIES	968														ENSSGRG00000034789	gcsha (ENSSGRG00000034790)	OTOGL (ENSSGRG00000034791) #22	ENSSGRG00000034793	ENSSGRG00000034794	ENSSGRG00000034800	ENSSGRG00000034802	wash1 (ENSSGRG00000034808)	ENSSGRG00000034837	fkbp4 (ENSSGRG00000034841)	B4GALNT3 (ENSSGRG00000034935)	tnni1c (ENSSGRG00000034990)	ENSSGRG00000035074	lmf2a (ENSSGRG00000035284)	miox (ENSSGRG00000035411)	ADM2 (ENSSGRG00000035416)	ENSSGRG00000035417	PPP6R2 (ENSSGRG00000035432)
Zebrafish	MODERN SPECIES	9	spata5l1 (ENSDARG00000061763)	ENSDARG00000092522	cyp1a (ENSDARG00000098315)	ulk3 (ENSDARG00000101661)	cplx3b (ENSDARG00000089486)	RGS9BP (ENSDARG00000086756)	zdhhc7 (ENSDARG00000019484)	nip7 (ENSDARG00000059075)	cog8 (ENSDARG00000002798)	NOB1 (ENSDARG00000016080)	WDR59 (ENSDARG00000088817)	glg1b (ENSDARG00000101210)	ENSDARG00000073944	ENSDARG00000088549	gcsha (ENSDARG00000091655)	OTOGL (ENSDARG00000088750) #22	ENSDARG00000008849	IQSEC3 (ENSDARG00000093091)	wash1 (ENSDARG00000063457)	ddx11 (ENSDARG00000011072)	fkbp4 (ENSDARG00000008447)	B4GALNT3 (ENSDARG00000058939)	tnni1c (ENSDARG00000042559)	c2cd5 (ENSDARG00000094590)	lmf2a (ENSDARG00000078094)	miox (ENSDARG00000002764)	ADM2 (ENSDARG00000078875)	ENSDARG00000076548	PPP6R2 (ENSDARG00000069654)	dnaja2b (ENSDARG00000010745)	ENSDARG00000112957
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00940000160698 #22
Atlantic herring	MODERN SPECIES	19	ENSCHAG00000020538	CALML4 (ENSCHAG00000020526)	ENSCHAG00000020509	ENSCHAG00000020492	ENSCHAG00000020485	DNAJA2 (ENSCHAG00000020477)	ENSCHAG00000020465	dnaja2b (ENSCHAG00000020455)	calub (ENSCHAG00000020289)	utp15 (ENSCHAG00000020221)	ENSCHAG00000020050	fkbp4 (ENSCHAG00000019626)	ddx11 (ENSCHAG00000019582)	wash1 (ENSCHAG00000019522)	IQSEC3 (ENSCHAG00000019475)	ENSCHAG00000019121 #22	ENSCHAG00000019072	ENSCHAG00000019053	septin15 (ENSCHAG00000017881)	ENSCHAG00000017834	ENSCHAG00000017816	ENSCHAG00000017803	ENSCHAG00000017774	ENSCHAG00000017768	ap3s2 (ENSCHAG00000017703)	ANPEP (ENSCHAG00000017064)	ENSCHAG00000017022	ENSCHAG00000017002	ENSCHAG00000016994	SV2B (ENSCHAG00000016734)	ENSCHAG00000016722
Spotted gar	MODERN SPECIES	674	krr1 (ENSLOCG00000016262)	ENSLOCG00000016264	ENSLOCG00000016266	nap1l1 (ENSLOCG00000016269)	BBS10 (ENSLOCG00000016274)	OSBPL8 (ENSLOCG00000016275)	zdhhc17 (ENSLOCG00000016277) #7	csrp2 (ENSLOCG00000016278) #8	e2f7 (ENSLOCG00000016279) #10	nav3 (ENSLOCG00000016281) #14	SYT1 (ENSLOCG00000016283) #18	pawr (ENSLOCG00000016287) #19	pawr (ENSLOCG00000017914) #19	ppp1r12a (ENSLOCG00000016288) #21	rps16 (ENSLOCG00000016289)	OTOGL (ENSLOCG00000016290) #22	PTPRQ (ENSLOCG00000016300) #23	ENSLOCG00000016302 ##25	lin7a (ENSLOCG00000016303) #26	ACSS3 (ENSLOCG00000016308) #28	ppfia2 (ENSLOCG00000016312) #30	ENSLOCG00000016320	ccdc59 (ENSLOCG00000016324) #32	mettl25 (ENSLOCG00000016327) #33	tmtc2a (ENSLOCG00000016332) #35	SLC6A15 (ENSLOCG00000016334)	ENSLOCG00000016339	ENSLOCG00000016340	alx1 (ENSLOCG00000016343)	RASSF9 (ENSLOCG00000016344)	NTS (ENSLOCG00000016345)