Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Sarcopterygii	ANCESTRAL SPECIES	353																ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00950000183189.a.a	ENSGT00940000153916.A	ENSGT01000000217921	ENSGT00940000153783.b.a	ENSGT00940000153889	ENSGT00940000156309.B	ENSGT01030000234567.B.b
Tetrapoda	ANCESTRAL SPECIES	137			ENSGT00930000151033	ENSGT00940000153249.b.c	ENSGT00940000161268	ENSGT00940000165567	ENSGT00940000156022.a	ENSGT00940000159844 #36	ENSGT00940000159372 #35	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000162310 #31	ENSGT00940000161727 #30
Amniota	ANCESTRAL SPECIES	79			ENSGT00940000161488	ENSGT00940000163167	ENSGT00930000151033	ENSGT00940000153249.b.c	ENSGT00940000161268	ENSGT00940000154035.a	ENSGT00940000165258	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00940000156022.a
Mammalia	ANCESTRAL SPECIES	58	ENSGT01010000225782	ENSGT00940000158661	ENSGT00940000158058	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37	ENSGT00940000155191.b	ENSGT00730000111225	ENSGT00950000182887.C.a.a.b
Theria	ANCESTRAL SPECIES	32	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #8	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37	ENSGT00390000016066	ENSGT00940000155191.b
Eutheria	ANCESTRAL SPECIES	4	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000016066
Primates	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Haplorrhini	ANCESTRAL SPECIES	29	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Simiiformes	ANCESTRAL SPECIES	23	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Catarrhini	ANCESTRAL SPECIES	24	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Cercopithecidae	ANCESTRAL SPECIES	26	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Rhinopithecus	ANCESTRAL SPECIES	6	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Black snub-nosed monkey	MODERN SPECIES	1512	SPEM3 (ENSRBIG00000041166) #7	SPEM2 (ENSRBIG00000040229) #8	SPEM1 (ENSRBIG00000019816) #9	NLGN2 (ENSRBIG00000039537) #10	TMEM256 (ENSRBIG00000040286) #11	PLSCR3 (ENSRBIG00000021022) #12	TNK1 (ENSRBIG00000044312) #13	TMEM95 (ENSRBIG00000035953) #14	KCTD11 (ENSRBIG00000010955) #15	ACAP1 (ENSRBIG00000028132) #16	NEURL4 (ENSRBIG00000038362) #17	GPS2 (ENSRBIG00000022093) #18	ENSRBIG00000032310 #19	YBX2 (ENSRBIG00000040919) #20	SLC2A4 (ENSRBIG00000033840) #21	CLDN7 (ENSRBIG00000042592) #22	ELP5 (ENSRBIG00000034570) #23	CTDNEP1 (ENSRBIG00000042434) #24	ENSRBIG00000027710 #25	PHF23 (ENSRBIG00000027808) #26	DVL2 (ENSRBIG00000031987) #27	ACADVL (ENSRBIG00000032751) #28	DLG4 (ENSRBIG00000038115) #29	ASGR1 (ENSRBIG00000036163) #30	ASGR2 (ENSRBIG00000034825) #31	CLEC10A (ENSRBIG00000034862) #32	ENSRBIG00000028578 #33	SLC16A11 (ENSRBIG00000040249) #34	SLC16A13 (ENSRBIG00000030006) #35	BCL6B (ENSRBIG00000041742) #36	RNASEK (ENSRBIG00000007939) #37
Golden snub-nosed monkey	MODERN SPECIES	2022										NEURL4 (ENSRROG00000029947) #17	GPS2 (ENSRROG00000040753) #18	ENSRROG00000040501 #19	YBX2 (ENSRROG00000041728) #20	SLC2A4 (ENSRROG00000025121) #21	ELP5 (ENSRROG00000030050) #23	CLDN7 (ENSRROG00000031667) #22	CTDNEP1 (ENSRROG00000034686) #24	GABARAP (ENSRROG00000001438) #25	PHF23 (ENSRROG00000043124) #26	DVL2 (ENSRROG00000033817) #27	ACADVL (ENSRROG00000038075) #28	DLG4 (ENSRROG00000040395) #29	ASGR1 (ENSRROG00000033532) #30	ASGR2 (ENSRROG00000032073) #31	CLEC10A (ENSRROG00000036649) #32	SLC16A11 (ENSRROG00000041729) #34	SLC16A13 (ENSRROG00000030913) #35	BCL6B (ENSRROG00000044570) #36	C17orf49 (ENSRROG00000031346)	RNASEK (ENSRROG00000032168) ##37	ALOX12 (ENSRROG00000005708)
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000166898.a.a.b.b.a.b.a.a.a.a	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Rhesus	MODERN SPECIES	7	SPEM2 (ENSMMUG00000015623) #8	SPEM1 (ENSMMUG00000015622) #9	NLGN2 (ENSMMUG00000055083) #10	TMEM256 (ENSMMUG00000015618) #11	PLSCR3 (ENSMMUG00000015617) #12	TNK1 (ENSMMUG00000015616) #13	TMEM95 (ENSMMUG00000006213) #14	KCTD11 (ENSMMUG00000039331) #15	ACAP1 (ENSMMUG00000006211) #16	NEURL4 (ENSMMUG00000006207) #17	GPS2 (ENSMMUG00000043527) #18	ENSMMUG00000006206 #19	YBX2 (ENSMMUG00000022712) #20	SLC2A4 (ENSMMUG00000022709) #21	ENSMMUG00000055331	CLDN7 (ENSMMUG00000010551) #22	ELP5 (ENSMMUG00000010549) #23	CTDNEP1 (ENSMMUG00000010547) #24	GABARAP (ENSMMUG00000010545) #25	PHF23 (ENSMMUG00000010543) #26	DVL2 (ENSMMUG00000052091) #27	ACADVL (ENSMMUG00000010538) #28	DLG4 (ENSMMUG00000010536) #29	ASGR1 (ENSMMUG00000003247) #30	ASGR2 (ENSMMUG00000040495) #31	CLEC10A (ENSMMUG00000021177) #32	SLC16A11 (ENSMMUG00000021176) #34	SLC16A13 (ENSMMUG00000055158) #35	BCL6B (ENSMMUG00000016268) #36	C16H17orf49 (ENSMMUG00000016266)	ALOX12 (ENSMMUG00000016264)
Crab-eating macaque	MODERN SPECIES	7	TMEM102 (ENSMFAG00000032693)	ENSMFAG00000058204	SPEM1 (ENSMFAG00000041099) #9	NLGN2 (ENSMFAG00000042656) #10	TMEM256 (ENSMFAG00000039608) #11	ENSMFAG00000040179 #12	TNK1 (ENSMFAG00000031134) #13	TMEM95 (ENSMFAG00000028065) #14	ACAP1 (ENSMFAG00000039943) #16	NEURL4 (ENSMFAG00000026826) #17	GPS2 (ENSMFAG00000035529) #18	ENSMFAG00000038518 #19	YBX2 (ENSMFAG00000039921) #20	SLC2A4 (ENSMFAG00000030627) #21	ENSMFAG00000065540	CLDN7 (ENSMFAG00000041154) #22	ELP5 (ENSMFAG00000038563) #23	CTDNEP1 (ENSMFAG00000002243) #24	GABARAP (ENSMFAG00000003346) #25	PHF23 (ENSMFAG00000032158) #26	DVL2 (ENSMFAG00000040838) #27	DLG4 (ENSMFAG00000032206) #29	ASGR1 (ENSMFAG00000035586) #30	ASGR2 (ENSMFAG00000051211) #31	CLEC10A (ENSMFAG00000043516) #32	ACADVL (ENSMFAG00000040305) #28	ENSMFAG00000058869 #33	SLC16A11 (ENSMFAG00000045121) #34	SLC16A13 (ENSMFAG00000009701) #35	BCL6B (ENSMFAG00000042774) #36	C17orf49 (ENSMFAG00000031742)
Pig-tailed macaque	MODERN SPECIES	94	SPEM1 (ENSMNEG00000045294) #9	NLGN2 (ENSMNEG00000028214) #10	TMEM256 (ENSMNEG00000044431) #11	PLSCR3 (ENSMNEG00000042064) #12	TNK1 (ENSMNEG00000037411) #13	ENSMNEG00000002232	ENSMNEG00000008269	TMEM95 (ENSMNEG00000038840) #14	KCTD11 (ENSMNEG00000022058) #15	ACAP1 (ENSMNEG00000031113) #16	NEURL4 (ENSMNEG00000043796) #17	GPS2 (ENSMNEG00000030659) #18	ENSMNEG00000033978 #19	YBX2 (ENSMNEG00000045221) #20	SLC2A4 (ENSMNEG00000035083) #21	CLDN7 (ENSMNEG00000042130) #22	ELP5 (ENSMNEG00000029548) #23	CTDNEP1 (ENSMNEG00000044513) #24	GABARAP (ENSMNEG00000044432) #25	PHF23 (ENSMNEG00000042981) #26	DVL2 (ENSMNEG00000030065) #27	ACADVL (ENSMNEG00000018968) #28	DLG4 (ENSMNEG00000000151) #29	ASGR1 (ENSMNEG00000035740) #30	ASGR2 (ENSMNEG00000031700) #31	CLEC10A (ENSMNEG00000036531) #32	SLC16A11 (ENSMNEG00000044695) #34	SLC16A13 (ENSMNEG00000026561) #35	BCL6B (ENSMNEG00000041667) #36	C17orf49 (ENSMNEG00000029035)	RNASEK (ENSMNEG00000041447) ##37
Cercopithecinae_b	ANCESTRAL SPECIES	26	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816.v #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000154514.d.b #33	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Cercopithecinae_d	ANCESTRAL SPECIES	14	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816.v #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.o ##37
Sooty mangabey	MODERN SPECIES	111	SPEM2 (ENSCATG00000028613) #8	SPEM1 (ENSCATG00000043977) #9	NLGN2 (ENSCATG00000044679) #10	TMEM256 (ENSCATG00000024245) #11	PLSCR3 (ENSCATG00000044542) #12	TNK1 (ENSCATG00000041204) #13	TMEM95 (ENSCATG00000041866) #14	ACAP1 (ENSCATG00000029717) #16	NEURL4 (ENSCATG00000031328) #17	ENSCATG00000020683 #18	ENSCATG00000007470 #18	ENSCATG00000043556 #19	YBX2 (ENSCATG00000036919) #20	SLC2A4 (ENSCATG00000040614) #21	ELP5 (ENSCATG00000030737) #23	CLDN7 (ENSCATG00000034734) #22	CTDNEP1 (ENSCATG00000043726) #24	GABARAP (ENSCATG00000011089) #25	PHF23 (ENSCATG00000033239) #26	DVL2 (ENSCATG00000044527) #27	ACADVL (ENSCATG00000033884) #28	DLG4 (ENSCATG00000006943) #29	ASGR1 (ENSCATG00000041107) #30	ASGR2 (ENSCATG00000043894) #31	CLEC10A (ENSCATG00000037042) #32	ENSCATG00000040713 #33	SLC16A13 (ENSCATG00000044626) #35	SLC16A11 (ENSCATG00000028441) #34	BCL6B (ENSCATG00000006169) #36	C17orf49 (ENSCATG00000028606)	RNASEK (ENSCATG00000042447) ##37
Drill	MODERN SPECIES	1146	SPEM3 (ENSMLEG00000026102) #7	SPEM2 (ENSMLEG00000036637) #8	SPEM1 (ENSMLEG00000009129) #9	NLGN2 (ENSMLEG00000036099) #10	TMEM256 (ENSMLEG00000042750) #11	PLSCR3 (ENSMLEG00000032026) #12	TNK1 (ENSMLEG00000041665) #13	TMEM95 (ENSMLEG00000041500) #14	KCTD11 (ENSMLEG00000023466) #15	ACAP1 (ENSMLEG00000028095) #16	NEURL4 (ENSMLEG00000042547) #17	GPS2 (ENSMLEG00000040366) #18	ENSMLEG00000037572 #19	YBX2 (ENSMLEG00000039452) #20	SLC2A4 (ENSMLEG00000029712) #21	CLDN7 (ENSMLEG00000029531) #22	ELP5 (ENSMLEG00000031259) #23	CTDNEP1 (ENSMLEG00000014681) #24	GABARAP (ENSMLEG00000038470) #25	PHF23 (ENSMLEG00000031839) #26	DVL2 (ENSMLEG00000035047) #27	ACADVL (ENSMLEG00000034444) #28	DLG4 (ENSMLEG00000040249) #29	ASGR1 (ENSMLEG00000031877) #30	ASGR2 (ENSMLEG00000043032) #31	CLEC10A (ENSMLEG00000028686) #32	SLC16A11 (ENSMLEG00000040831) #34	SLC16A13 (ENSMLEG00000038425) #35	BCL6B (ENSMLEG00000037861) #36	C17orf49 (ENSMLEG00000040153)	ALOX12 (ENSMLEG00000012272)
Olive baboon	MODERN SPECIES	8	TMEM102 (ENSPANG00000024095)	SPEM2 (ENSPANG00000024094) #8	SPEM1 (ENSPANG00000024184) #9	NLGN2 (ENSPANG00000024185) #10	TMEM256 (ENSPANG00000024193) #11	PLSCR3 (ENSPANG00000024192) #12	TNK1 (ENSPANG00000024191) #13	TMEM95 (ENSPANG00000024190) #14	KCTD11 (ENSPANG00000032916) #15	ACAP1 (ENSPANG00000024189) #16	NEURL4 (ENSPANG00000024188) #17	GPS2 (ENSPANG00000024187) #18	ENSPANG00000024186 #19	YBX2 (ENSPANG00000024250) #20	SLC2A4 (ENSPANG00000024215) #21	CLDN7 (ENSPANG00000024214) #22	ELP5 (ENSPANG00000029962) #23	CTDNEP1 (ENSPANG00000024212) #24	GABARAP (ENSPANG00000045623) #25	PHF23 (ENSPANG00000024211) #26	DVL2 (ENSPANG00000024210) #27	ACADVL (ENSPANG00000024209) #28	DLG4 (ENSPANG00000024208) #29	ASGR1 (ENSPANG00000024207) #30	ASGR2 (ENSPANG00000024206) #31	CLEC10A (ENSPANG00000024205) #32	ENSPANG00000024204 #33	SLC16A11 (ENSPANG00000024203) #34	SLC16A13 (ENSPANG00000024202) #35	BCL6B (ENSPANG00000024201) #36	C17orf49 (ENSPANG00000024200)
Vervet Monkey	MODERN SPECIES	7	TMEM102 (ENSCSAG00000011729)	SPEM2 (ENSCSAG00000011734) #8	SPEM1 (ENSCSAG00000011740) #9	NLGN2 (ENSCSAG00000011745) #10	TMEM256 (ENSCSAG00000011751) #11	PLSCR3 (ENSCSAG00000011756) #12	TNK1 (ENSCSAG00000011764) #13	TMEM95 (ENSCSAG00000011774) #14	KCTD11 (ENSCSAG00000000567) #15	ACAP1 (ENSCSAG00000011788) #16	NEURL4 (ENSCSAG00000011806) #17	ENSCSAG00000011825 #19	GPS2 (ENSCSAG00000011817) #18	YBX2 (ENSCSAG00000011857) #20	SLC2A4 (ENSCSAG00000011874) #21	CLDN7 (ENSCSAG00000011879) #22	ELP5 (ENSCSAG00000011886) #23	CTDNEP1 (ENSCSAG00000011895) #24	GABARAP (ENSCSAG00000011904) #25	PHF23 (ENSCSAG00000011910) #26	DVL2 (ENSCSAG00000011919) #27	ACADVL (ENSCSAG00000012021) #28	DLG4 (ENSCSAG00000012054) #29	ASGR1 (ENSCSAG00000012076) #30	ASGR2 (ENSCSAG00000012099) #31	CLEC10A (ENSCSAG00000012123) #32	SLC16A11 (ENSCSAG00000012139) #34	SLC16A13 (ENSCSAG00000012161) #35	BCL6B (ENSCSAG00000012171) #36	C17orf49 (ENSCSAG00000012189)	ENSCSAG00000012198
Hominoidea	ANCESTRAL SPECIES	25	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.o ##37
Hominidae	ANCESTRAL SPECIES	20	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.o ##37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b.y.a #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.o ##37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b.y.a #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.o ##37
Pan	ANCESTRAL SPECIES	3	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.bb #18	ENSGT00390000003738.a.a.b.y.a #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210.i #23	ENSGT01040000240503.B.eb.a.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.o ##37
Chimpanzee	MODERN SPECIES	8	FGF11 (ENSPTRG00000050130)	TMEM102 (ENSPTRG00000008688)	SPEM3 (ENSPTRG00000046239) #7	SPEM2 (ENSPTRG00000008686) #8	SPEM1 (ENSPTRG00000008685) #9	NLGN2 (ENSPTRG00000008684) #10	TMEM256 (ENSPTRG00000030987) #11	PLSCR3 (ENSPTRG00000008683) #12	TNK1 (ENSPTRG00000008681) #13	TMEM95 (ENSPTRG00000008680) #14	KCTD11 (ENSPTRG00000008679) #15	ACAP1 (ENSPTRG00000033884) #16	GPS2 (ENSPTRG00000023046) #18	NEURL4 (ENSPTRG00000033982) #17	EIF5A (ENSPTRG00000008674) #19	CLDN7 (ENSPTRG00000008671) #22	ENSPTRG00000039212 #23	CTDNEP1 (ENSPTRG00000008668) #24	GABARAP (ENSPTRG00000034115) #25	PHF23 (ENSPTRG00000008666) #26	DVL2 (ENSPTRG00000008665) #27	ACADVL (ENSPTRG00000008664) #28	DLG4 (ENSPTRG00000008663) #29	ASGR1 (ENSPTRG00000008662) #30	ASGR2 (ENSPTRG00000008661) #31	CLEC10A (ENSPTRG00000008659) #32	SLC16A11 (ENSPTRG00000008658) #34	SLC16A13 (ENSPTRG00000008657) #35	BCL6B (ENSPTRG00000008656) #36	RNASEK (ENSPTRG00000030994) ##37	C17H17orf49 (ENSPTRG00000008655)
Bonobo	MODERN SPECIES	8	SPEM3 (ENSPPAG00000030365) #7	SPEM2 (ENSPPAG00000039663) #8	SPEM1 (ENSPPAG00000043589) #9	ENSPPAG00000039960 #10	TMEM256 (ENSPPAG00000038645) #11	PLSCR3 (ENSPPAG00000031373) #12	TNK1 (ENSPPAG00000030669) #13	ENSPPAG00000021799 #14	KCTD11 (ENSPPAG00000016953) #15	ACAP1 (ENSPPAG00000037176) #16	NEURL4 (ENSPPAG00000035488) #17	GPS2 (ENSPPAG00000035090) #18	EIF5A (ENSPPAG00000033628) #19	YBX2 (ENSPPAG00000041892) #20	SLC2A4 (ENSPPAG00000003711) #21	CLDN7 (ENSPPAG00000035150) #22	ENSPPAG00000043134 #23	CTDNEP1 (ENSPPAG00000035521) #24	GABARAP (ENSPPAG00000030015) #25	PHF23 (ENSPPAG00000042657) #26	DVL2 (ENSPPAG00000031206) #27	ACADVL (ENSPPAG00000039986) #28	DLG4 (ENSPPAG00000037759) #29	ASGR1 (ENSPPAG00000033474) #30	ASGR2 (ENSPPAG00000031315) #31	CLEC10A (ENSPPAG00000036312) #32	ENSPPAG00000041737 #34	SLC16A13 (ENSPPAG00000037248) #35	BCL6B (ENSPPAG00000033435) #36	C17orf49 (ENSPPAG00000030457)	ENSPPAG00000039384 ##37
Human	MODERN SPECIES	8	SPEM3 (ENSG00000283439) #7	SPEM2 (ENSG00000184560) #8	SPEM1 (ENSG00000181323) #9	NLGN2 (ENSG00000169992) #10	TMEM256 (ENSG00000205544) #11	PLSCR3 (ENSG00000187838) #12	TNK1 (ENSG00000174292) #13	TMEM95 (ENSG00000182896) #14	KCTD11 (ENSG00000213859) #15	ACAP1 (ENSG00000072818) #16	NEURL4 (ENSG00000215041) #17	GPS2 (ENSG00000132522) #18	EIF5A (ENSG00000132507) #19	YBX2 (ENSG00000006047) #20	SLC2A4 (ENSG00000181856) #21	CLDN7 (ENSG00000181885) #22	ELP5 (ENSG00000170291) #23	CTDNEP1 (ENSG00000175826) #24	GABARAP (ENSG00000170296) #25	PHF23 (ENSG00000040633) #26	DVL2 (ENSG00000004975) #27	ACADVL (ENSG00000072778) #28	DLG4 (ENSG00000132535) #29	ASGR1 (ENSG00000141505) #30	ASGR2 (ENSG00000161944) #31	CLEC10A (ENSG00000132514) #32	SLC16A11 (ENSG00000174326) #34	SLC16A13 (ENSG00000174327) #35	BCL6B (ENSG00000161940) #36	C17orf49 (ENSG00000258315)	RNASEK-C17orf49 (ENSG00000161939)
Gorilla	MODERN SPECIES	8	NLGN2 (ENSGGOG00000011800) #10	TMEM256 (ENSGGOG00000000113) #11	PLSCR3 (ENSGGOG00000002013) #12	TNK1 (ENSGGOG00000002000) #13	ENSGGOG00000037297 #16	ENSGGOG00000040573 #15	ENSGGOG00000039735 #14	ENSGGOG00000042434 #14	ENSGGOG00000038897 #15	ENSGGOG00000001685 #16	NEURL4 (ENSGGOG00000001677) #17	GPS2 (ENSGGOG00000001672) #18	EIF5A (ENSGGOG00000012032) #19	YBX2 (ENSGGOG00000007399) #20	SLC2A4 (ENSGGOG00000007389) #21	CLDN7 (ENSGGOG00000025438) #22	ELP5 (ENSGGOG00000025027) #23	CTDNEP1 (ENSGGOG00000013777) #24	GABARAP (ENSGGOG00000013770) #25	PHF23 (ENSGGOG00000005820) #26	DVL2 (ENSGGOG00000006765) #27	ACADVL (ENSGGOG00000006756) #28	DLG4 (ENSGGOG00000006737) #29	ASGR1 (ENSGGOG00000008200) #30	ASGR2 (ENSGGOG00000013515) #31	SLC16A11 (ENSGGOG00000001277) #34	SLC16A13 (ENSGGOG00000001274) #35	BCL6B (ENSGGOG00000009787) #36	ENSGGOG00000009778 ##37	ENSGGOG00000009783	ALOX12 (ENSGGOG00000009757)
Orangutan	MODERN SPECIES	8	SPEM3 (ENSPPYG00000031603) #7	SPEM2 (ENSPPYG00000007918) #8	SPEM1 (ENSPPYG00000007917) #9	NLGN2 (ENSPPYG00000007916) #10	TMEM256 (ENSPPYG00000007915) #11	PLSCR3 (ENSPPYG00000007914) #12	TNK1 (ENSPPYG00000007913) #13	ENSPPYG00000007912 #14	KCTD11 (ENSPPYG00000040408) #15	ACAP1 (ENSPPYG00000007909) #16	NEURL4 (ENSPPYG00000007908) #17	GPS2 (ENSPPYG00000035492) #18	ENSPPYG00000007907 #19	ENSPPYG00000034206 #20	SLC2A4 (ENSPPYG00000007905) #21	CLDN7 (ENSPPYG00000007904) #22	ELP5 (ENSPPYG00000007903) #23	CTDNEP1 (ENSPPYG00000007902) #24	GABARAP (ENSPPYG00000007901) #25	PHF23 (ENSPPYG00000007900) #26	DVL2 (ENSPPYG00000007899) #27	ACADVL (ENSPPYG00000007898) #28	DLG4 (ENSPPYG00000007897) #29	ASGR1 (ENSPPYG00000007896) #30	ASGR2 (ENSPPYG00000007895) #31	CLEC10A (ENSPPYG00000007894) #32	SLC16A11 (ENSPPYG00000007893) #34	SLC16A13 (ENSPPYG00000007892) #35	BCL6B (ENSPPYG00000007891) #36	C17orf49 (ENSPPYG00000007890)	ENSPPYG00000007889 ##37
Gibbon	MODERN SPECIES	144														ENSNLEG00000008063 #20	SLC2A4 (ENSNLEG00000008058) #21	ENSNLEG00000008054 #22	ENSNLEG00000008053 #23	ENSNLEG00000035429 ##24	GABARAP (ENSNLEG00000028899) #25	DVL2 (ENSNLEG00000008027) #27	ACADVL (ENSNLEG00000007995) #28	DLG4 (ENSNLEG00000007961) #29
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.`b #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00490000043413.a.a.b	ENSGT00940000162310 #31	ENSGT00940000153472.a.a.db.a.b	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.`b #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00490000043413.b.b.a	ENSGT00940000162310 #31	ENSGT00940000153472.a.a.db.a.b	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Marmoset	MODERN SPECIES	17	SPEM3 (ENSCJAG00000042010) #7	SPEM2 (ENSCJAG00000016391) #8	SPEM1 (ENSCJAG00000016399) #9	NLGN2 (ENSCJAG00000016351) #10	TMEM256 (ENSCJAG00000037786) #11	PLSCR3 (ENSCJAG00000016410) #12	TNK1 (ENSCJAG00000016438) #13	TMEM95 (ENSCJAG00000016445) #14	KCTD11 (ENSCJAG00000047213) #15	ACAP1 (ENSCJAG00000016450) #16	NEURL4 (ENSCJAG00000016494) #17	GPS2 (ENSCJAG00000036993) #18	ENSCJAG00000041936 #19	ENSCJAG00000016581 #20	SLC2A4 (ENSCJAG00000016587) #21	CLDN7 (ENSCJAG00000016622) #22	ELP5 (ENSCJAG00000016633) #23	CTDNEP1 (ENSCJAG00000016644) #24	GABARAP (ENSCJAG00000044745) #25	PHF23 (ENSCJAG00000016665) #26	DVL2 (ENSCJAG00000016678) #27	ACADVL (ENSCJAG00000016703) #28	DLG4 (ENSCJAG00000016759) #29	ASGR1 (ENSCJAG00000044555) #30	ENSCJAG00000014693	ASGR2 (ENSCJAG00000043957) #31	CLEC10A (ENSCJAG00000016819) #32	SLC16A11 (ENSCJAG00000016855) #34	SLC16A13 (ENSCJAG00000016892) #35	BCL6B (ENSCJAG00000016905) #36	C17orf49 (ENSCJAG00000045672)
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000164517 #7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049.`b #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00490000043413.b.b.a	ENSGT00940000162310 #31	ENSGT00940000153472.a.a.db.a.b	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Capuchin	MODERN SPECIES	72	SPEM3 (ENSCCAG00000024983) #7	SPEM2 (ENSCCAG00000029641) #8	SPEM1 (ENSCCAG00000027323) #9	NLGN2 (ENSCCAG00000027559) #10	TMEM256 (ENSCCAG00000032517) #11	PLSCR3 (ENSCCAG00000023748) #12	TNK1 (ENSCCAG00000027718) #13	TMEM95 (ENSCCAG00000018559) #14	ACAP1 (ENSCCAG00000027603) #16	NEURL4 (ENSCCAG00000024857) #17	GPS2 (ENSCCAG00000022434) #18	ENSCCAG00000027102 #19	YBX2 (ENSCCAG00000025671) #20	SLC2A4 (ENSCCAG00000033065) #21	ENSCCAG00000019546	CLDN7 (ENSCCAG00000009643) #22	ENSCCAG00000031077 #23	CTDNEP1 (ENSCCAG00000029663) #24	GABARAP (ENSCCAG00000026092) #25	DVL2 (ENSCCAG00000032602) #27	ACADVL (ENSCCAG00000025058) #28	DLG4 (ENSCCAG00000035701) #29	ASGR1 (ENSCCAG00000033493) #30	ENSCCAG00000032851	ASGR2 (ENSCCAG00000014111) #31	CLEC10A (ENSCCAG00000034585) #32	SLC16A11 (ENSCCAG00000033233) #34	SLC16A13 (ENSCCAG00000032968) #35	BCL6B (ENSCCAG00000023607) #36	RNASEK-C17orf49 (ENSCCAG00000022343)	ENSCCAG00000028552 ##37
Bolivian squirrel monkey	MODERN SPECIES	74	SPEM3 (ENSSBOG00000035363) #7	SPEM2 (ENSSBOG00000035215) #8	SPEM1 (ENSSBOG00000030260) #9	NLGN2 (ENSSBOG00000023613) #10	TMEM256 (ENSSBOG00000019595) #11	PLSCR3 (ENSSBOG00000034606) #12	TNK1 (ENSSBOG00000035858) #13	TMEM95 (ENSSBOG00000027103) #14	KCTD11 (ENSSBOG00000013416) #15	ACAP1 (ENSSBOG00000023970) #16	NEURL4 (ENSSBOG00000011062) #17	ENSSBOG00000024039 #18	ENSSBOG00000035796 #19	YBX2 (ENSSBOG00000029566) #20	SLC2A4 (ENSSBOG00000011610) #21	CLDN7 (ENSSBOG00000024660) #22	ELP5 (ENSSBOG00000003805) #23	CTDNEP1 (ENSSBOG00000026432) #24	GABARAP (ENSSBOG00000026308) #25	PHF23 (ENSSBOG00000030570) #26	DVL2 (ENSSBOG00000023994) #27	ACADVL (ENSSBOG00000022789) #28	DLG4 (ENSSBOG00000035902) #29	ASGR1 (ENSSBOG00000021147) #30	ENSSBOG00000022646	ASGR2 (ENSSBOG00000000186) #31	ENSSBOG00000024197	CLEC10A (ENSSBOG00000033411) #32	SLC16A11 (ENSSBOG00000028639) #34	SLC16A13 (ENSSBOG00000036117) #35	BCL6B (ENSSBOG00000025653) #36
Mas night monkey	MODERN SPECIES	807	SPEM3 (ENSANAG00000030842) #7	SPEM2 (ENSANAG00000028796) #8	SPEM1 (ENSANAG00000019788) #9	NLGN2 (ENSANAG00000035171) #10	TMEM256 (ENSANAG00000032721) #11	PLSCR3 (ENSANAG00000038187) #12	TNK1 (ENSANAG00000029133) #13	TMEM95 (ENSANAG00000028552) #14	KCTD11 (ENSANAG00000020172) #15	ACAP1 (ENSANAG00000031333) #16	NEURL4 (ENSANAG00000021923) #17	GPS2 (ENSANAG00000025289) #18	ENSANAG00000021881 #19	YBX2 (ENSANAG00000019540) #20	SLC2A4 (ENSANAG00000011190) #21	CLDN7 (ENSANAG00000033943) #22	ELP5 (ENSANAG00000022276) #23	CTDNEP1 (ENSANAG00000035132) #24	GABARAP (ENSANAG00000027944) #25	DVL2 (ENSANAG00000029709) #27	ACADVL (ENSANAG00000021917) #28	DLG4 (ENSANAG00000001842) #29	ASGR1 (ENSANAG00000021359) #30	ENSANAG00000010015	ASGR2 (ENSANAG00000036322) #31	ENSANAG00000033926	CLEC10A (ENSANAG00000029703) #32	SLC16A11 (ENSANAG00000023371) #34	SLC16A13 (ENSANAG00000023139) #35	BCL6B (ENSANAG00000038241) #36	C17orf49 (ENSANAG00000016676)
Tarsier	MODERN SPECIES	4929							PLSCR3 (ENSTSYG00000034744) #12	TNK1 (ENSTSYG00000007455) #13	TMEM95 (ENSTSYG00000028979) #14	ACAP1 (ENSTSYG00000035079) #16	NEURL4 (ENSTSYG00000014159) #17	GPS2 (ENSTSYG00000014157) #18	EIF5A (ENSTSYG00000028146) #19	YBX2 (ENSTSYG00000030765) #20	SLC2A4 (ENSTSYG00000010734) #21	CLDN7 (ENSTSYG00000031793) #22	ELP5 (ENSTSYG00000011620) #23	CTDNEP1 (ENSTSYG00000011593) #24	GABARAP (ENSTSYG00000031305) #25	PHF23 (ENSTSYG00000030412) #26	DVL2 (ENSTSYG00000002261) #27	ACADVL (ENSTSYG00000002190) #28	DLG4 (ENSTSYG00000012919) #29	ASGR1 (ENSTSYG00000026893) #30	ASGR2 (ENSTSYG00000002009) #31	CLEC10A (ENSTSYG00000013939) #32	SLC16A11 (ENSTSYG00000002416) #34	SLC16A13 (ENSTSYG00000002406) #35	BCL6B (ENSTSYG00000010666) #36	CUNH17orf49 (ENSTSYG00000006904)	RNASEK (ENSTSYG00000006902) #37
Strepsirrhini	ANCESTRAL SPECIES	21	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Lemuriformes	ANCESTRAL SPECIES	33	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.u.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Lemuriformes_a	ANCESTRAL SPECIES	45	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.u.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.eb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.p.a #37
Greater bamboo lemur	MODERN SPECIES	365	TMEM102 (ENSPSMG00000019436)	SPEM2 (ENSPSMG00000019442) #8	NLGN2 (ENSPSMG00000019454) #10	TMEM256 (ENSPSMG00000019461) #11	PLSCR3 (ENSPSMG00000019506) #12	TNK1 (ENSPSMG00000019520) #13	TMEM95 (ENSPSMG00000019531) #14	KCTD11 (ENSPSMG00000019536) #15	ACAP1 (ENSPSMG00000019565) #16	ENSPSMG00000019603	NEURL4 (ENSPSMG00000019672) #17	GPS2 (ENSPSMG00000019707) #18	ENSPSMG00000019784 #19	YBX2 (ENSPSMG00000019815) #20	SLC2A4 (ENSPSMG00000019885) #21	CLDN7 (ENSPSMG00000019920) #22	ELP5 (ENSPSMG00000019969) #23	CTDNEP1 (ENSPSMG00000020003) #24	GABARAP (ENSPSMG00000020022) #25	PHF23 (ENSPSMG00000020041) #26	DVL2 (ENSPSMG00000020077) #27	ACADVL (ENSPSMG00000020091) #28	DLG4 (ENSPSMG00000020384) #29	ASGR1 (ENSPSMG00000020635) #30	ASGR2 (ENSPSMG00000020649) #31	CLEC10A (ENSPSMG00000020674) #32	SLC16A11 (ENSPSMG00000020683) #34	SLC16A13 (ENSPSMG00000020691) #35	BCL6B (ENSPSMG00000020700) #36	C17orf49 (ENSPSMG00000020742)	ALOX12 (ENSPSMG00000020787)
Coquerels sifaka	MODERN SPECIES	637	SPEM3 (ENSPCOG00000027458) #7	SPEM2 (ENSPCOG00000020475) #8	SPEM1 (ENSPCOG00000005919) #9	NLGN2 (ENSPCOG00000026978) #10	TMEM256 (ENSPCOG00000027293) #11	PLSCR3 (ENSPCOG00000019945) #12	TNK1 (ENSPCOG00000016772) #13	TMEM95 (ENSPCOG00000021816) #14	KCTD11 (ENSPCOG00000003158) #15	ACAP1 (ENSPCOG00000023219) #16	NEURL4 (ENSPCOG00000027884) #17	GPS2 (ENSPCOG00000019041) #18	ENSPCOG00000019535 #19	YBX2 (ENSPCOG00000006030) #20	SLC2A4 (ENSPCOG00000018310) #21	CLDN7 (ENSPCOG00000023094) #22	ELP5 (ENSPCOG00000027171) #23	CTDNEP1 (ENSPCOG00000015273) #24	GABARAP (ENSPCOG00000022187) #25	PHF23 (ENSPCOG00000007415) #26	DVL2 (ENSPCOG00000014485) #27	ACADVL (ENSPCOG00000020753) #28	DLG4 (ENSPCOG00000020354) #29	ASGR1 (ENSPCOG00000014855) #30	ASGR2 (ENSPCOG00000028328) #31	CLEC10A (ENSPCOG00000012952) #32	SLC16A11 (ENSPCOG00000018552) #34	SLC16A13 (ENSPCOG00000020281) #35	BCL6B (ENSPCOG00000026491) #36	C17orf49 (ENSPCOG00000028223)	RNASEK (ENSPCOG00000016702) #37
Mouse lemur	MODERN SPECIES	7	SPEM3 (ENSMICG00000042623) #7	SPEM2 (ENSMICG00000028897) #8	SPEM1 (ENSMICG00000012137) #9	NLGN2 (ENSMICG00000027843) #10	TMEM256 (ENSMICG00000048046) #11	PLSCR3 (ENSMICG00000012544) #12	TNK1 (ENSMICG00000017889) #13	ENSMICG00000010844	TMEM95 (ENSMICG00000012536) #14	ACAP1 (ENSMICG00000012513) #16	NEURL4 (ENSMICG00000012465) #17	GPS2 (ENSMICG00000036660) #18	ENSMICG00000028821 #19	YBX2 (ENSMICG00000012453) #20	SLC2A4 (ENSMICG00000012447) #21	CLDN7 (ENSMICG00000012478) #22	ELP5 (ENSMICG00000026605) #23	CTDNEP1 (ENSMICG00000032783) #24	GABARAP (ENSMICG00000035720) #25	ENSMICG00000004320 #26	DVL2 (ENSMICG00000004315) #27	ACADVL (ENSMICG00000004298) #28	DLG4 (ENSMICG00000004288) #29	ASGR1 (ENSMICG00000004281) #30	ASGR2 (ENSMICG00000012091) #31	CLEC10A (ENSMICG00000037927) #32	SLC16A11 (ENSMICG00000005931) #34	SLC16A13 (ENSMICG00000005926) #35	BCL6B (ENSMICG00000041989) #36	C17orf49 (ENSMICG00000014069)	ENSMICG00000045291 #37
Bushbaby	MODERN SPECIES	161	TMEM102 (ENSOGAG00000031432)	SPEM2 (ENSOGAG00000034681) #8	SPEM1 (ENSOGAG00000011428) #9	NLGN2 (ENSOGAG00000011427) #10	TMEM256 (ENSOGAG00000011378) #11	PLSCR3 (ENSOGAG00000014242) #12	TNK1 (ENSOGAG00000014239) #13	KCTD11 (ENSOGAG00000028322) #15	ACAP1 (ENSOGAG00000032602) #16	ENSOGAG00000034278	NEURL4 (ENSOGAG00000001072) #17	GPS2 (ENSOGAG00000031484) #18	ENSOGAG00000014230 #19	YBX2 (ENSOGAG00000004392) #20	SLC2A4 (ENSOGAG00000004391) #21	CLDN7 (ENSOGAG00000026987) #22	ENSOGAG00000004390 #23	CTDNEP1 (ENSOGAG00000004389) #24	GABARAP (ENSOGAG00000004388) #25	PHF23 (ENSOGAG00000030652) #26	DVL2 (ENSOGAG00000004386) #27	ACADVL (ENSOGAG00000004382) #28	DLG4 (ENSOGAG00000004379) #29	ASGR1 (ENSOGAG00000004377) #30	ASGR2 (ENSOGAG00000004376) #31	CLEC10A (ENSOGAG00000004374) #32	SLC16A11 (ENSOGAG00000004373) #34	SLC16A13 (ENSOGAG00000031541) #35	BCL6B (ENSOGAG00000027908) #36	C17orf49 (ENSOGAG00000001835)	ALOX12 (ENSOGAG00000004365)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Glires	ANCESTRAL SPECIES	3	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Hystricomorpha_b	ANCESTRAL SPECIES	22	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Long-tailed chinchilla	MODERN SPECIES	174	SPEM2 (ENSCLAG00000008313) #8	SPEM1 (ENSCLAG00000008667) #9	NLGN2 (ENSCLAG00000014101) #10	TMEM256 (ENSCLAG00000013372) #11	PLSCR3 (ENSCLAG00000014430) #12	TNK1 (ENSCLAG00000012522) #13	TMEM95 (ENSCLAG00000013396) #14	ACAP1 (ENSCLAG00000011835) #16	ENSCLAG00000013536	NEURL4 (ENSCLAG00000014798) #17	GPS2 (ENSCLAG00000012750) #18	ENSCLAG00000013712 #19	YBX2 (ENSCLAG00000010306) #20	SLC2A4 (ENSCLAG00000014647) #21	ELP5 (ENSCLAG00000014750) #23	CLDN7 (ENSCLAG00000015583) #22	CTDNEP1 (ENSCLAG00000011085) #24	GABARAP (ENSCLAG00000007883) #25	PHF23 (ENSCLAG00000007184) #26	DVL2 (ENSCLAG00000008610) #27	ACADVL (ENSCLAG00000009521) #28	DLG4 (ENSCLAG00000010331) #29	ASGR1 (ENSCLAG00000012374) #30	ASGR2 (ENSCLAG00000007744) #31	CLEC10A (ENSCLAG00000007810) #32	SLC16A11 (ENSCLAG00000010002) #34	SLC16A13 (ENSCLAG00000013278) #35	BCL6B (ENSCLAG00000014925) #36	C17orf49 (ENSCLAG00000009875)	RNASEK (ENSCLAG00000008824) #37	ALOX12 (ENSCLAG00000009075)
Degu	MODERN SPECIES	139	SPEM1 (ENSODEG00000017419) #9	NLGN2 (ENSODEG00000017940) #10	TMEM256 (ENSODEG00000017543) #11	PLSCR3 (ENSODEG00000017471) #12	TNK1 (ENSODEG00000017461) #13	ENSODEG00000020426	TMEM95 (ENSODEG00000017467) #14	KCTD11 (ENSODEG00000020512) #15	ACAP1 (ENSODEG00000017479) #16	NEURL4 (ENSODEG00000017430) #17	GPS2 (ENSODEG00000017752) #18	ENSODEG00000017377 #19	YBX2 (ENSODEG00000017530) #20	SLC2A4 (ENSODEG00000017582) #21	ENSODEG00000020514	CLDN7 (ENSODEG00000017387) #22	ELP5 (ENSODEG00000017304) #23	ENSODEG00000017490 #24	GABARAP (ENSODEG00000017476) #25	PHF23 (ENSODEG00000017333) #26	DVL2 (ENSODEG00000017448) #27	ACADVL (ENSODEG00000017418) #28	DLG4 (ENSODEG00000017252) #29	ASGR1 (ENSODEG00000017268) #30	ENSODEG00000020478	ASGR2 (ENSODEG00000017289) #31	ENSODEG00000017527	CLEC10A (ENSODEG00000017450) #32	ENSODEG00000017420	SLC16A11 (ENSODEG00000017518) #34	SLC16A13 (ENSODEG00000017767) #35
Guinea pig	MODERN SPECIES	61	TMEM102 (ENSCPOG00000033790)	SPEM2 (ENSCPOG00000023905) #8	SPEM1 (ENSCPOG00000022568) #9	NLGN2 (ENSCPOG00000019317) #10	TMEM256 (ENSCPOG00000036227) #11	PLSCR3 (ENSCPOG00000009287) #12	TNK1 (ENSCPOG00000009564) #13	TMEM95 (ENSCPOG00000033494) #14	ACAP1 (ENSCPOG00000009885) #16	ENSCPOG00000021214	NEURL4 (ENSCPOG00000009550) #17	GPS2 (ENSCPOG00000035566) #18	ENSCPOG00000038013 #19	YBX2 (ENSCPOG00000009543) #20	SLC2A4 (ENSCPOG00000031830) #21	CLDN7 (ENSCPOG00000020951) #22	ELP5 (ENSCPOG00000032736) #23	CTDNEP1 (ENSCPOG00000037721) #24	ENSCPOG00000012853 #25	PHF23 (ENSCPOG00000033111) #26	DVL2 (ENSCPOG00000023401) #27	ACADVL (ENSCPOG00000020114) #28	DLG4 (ENSCPOG00000020815) #29	ASGR1 (ENSCPOG00000009813) #30	ASGR2 (ENSCPOG00000039341) #31	ENSCPOG00000009682 #32	SLC16A13 (ENSCPOG00000030718) #35	SLC16A11 (ENSCPOG00000005851) #34	BCL6B (ENSCPOG00000004066) #36	C17orf49 (ENSCPOG00000004065)	RNASEK (ENSCPOG00000004064) #37
Naked mole-rat female	MODERN SPECIES	12	TNFSF12 (ENSHGLG00000010122)	ENSHGLG00000011091	ENSHGLG00000046218	FGF11 (ENSHGLG00000042024)	ENSHGLG00000049999	SPEM2 (ENSHGLG00000009650) #8	NLGN2 (ENSHGLG00000041822) #10	TMEM256 (ENSHGLG00000018691) #11	PLSCR3 (ENSHGLG00000019015) #12	KCTD11 (ENSHGLG00000047152) #15	ENSHGLG00000018261	GPS2 (ENSHGLG00000011192) #18	ENSHGLG00000014186 #20	ENSHGLG00000044131 #19	SLC2A4 (ENSHGLG00000013185) #21	CLDN7 (ENSHGLG00000011140) #22	ELP5 (ENSHGLG00000041587) #23	CTDNEP1 (ENSHGLG00000016839) #24	GABARAP (ENSHGLG00000037772) #25	DVL2 (ENSHGLG00000009952) #27	ACADVL (ENSHGLG00000011018) #28	DLG4 (ENSHGLG00000010073) #29	ASGR1 (ENSHGLG00000011616) #30	ENSHGLG00000009539 #31	ENSHGLG00000034256 #32	ENSHGLG00000039896	ENSHGLG00000045230	ENSHGLG00000010039	ENSHGLG00000010750	RNASEK (ENSHGLG00000012296) #37	C17orf49 (ENSHGLG00000009897)
Sciuridae	ANCESTRAL SPECIES	25	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Marmotini	ANCESTRAL SPECIES	42	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Alpin marmot	MODERN SPECIES	92	SPEM2 (ENSMMMG00000019557) #8	SPEM1 (ENSMMMG00000019555) #9	NLGN2 (ENSMMMG00000019538) #10	TMEM256 (ENSMMMG00000019534) #11	PLSCR3 (ENSMMMG00000019507) #12	TNK1 (ENSMMMG00000019484) #13	TMEM95 (ENSMMMG00000019482) #14	KCTD11 (ENSMMMG00000019479) #15	ACAP1 (ENSMMMG00000019466) #16	ENSMMMG00000019415	NEURL4 (ENSMMMG00000019309) #17	GPS2 (ENSMMMG00000019304) #18	ENSMMMG00000019282 #19	YBX2 (ENSMMMG00000019268) #20	SLC2A4 (ENSMMMG00000019260) #21	CLDN7 (ENSMMMG00000019254) #22	ELP5 (ENSMMMG00000019251) #23	CTDNEP1 (ENSMMMG00000019241) #24	GABARAP (ENSMMMG00000019236) #25	PHF23 (ENSMMMG00000019227) #26	DVL2 (ENSMMMG00000019219) #27	ACADVL (ENSMMMG00000019195) #28	DLG4 (ENSMMMG00000018940) #29	ASGR1 (ENSMMMG00000018913) #30	ASGR2 (ENSMMMG00000018905) #31	ENSMMMG00000018884 #32	SLC16A11 (ENSMMMG00000018851) #34	SLC16A13 (ENSMMMG00000018850) #35	BCL6B (ENSMMMG00000018844) #36	C17orf49 (ENSMMMG00000018813)	RNASEK (ENSMMMG00000018806) #37
Marmotini_b	ANCESTRAL SPECIES	35	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Squirrel	MODERN SPECIES	195	SPEM2 (ENSSTOG00000030621) #8	SPEM1 (ENSSTOG00000031005) #9	NLGN2 (ENSSTOG00000000335) #10	TMEM256 (ENSSTOG00000007712) #11	PLSCR3 (ENSSTOG00000007695) #12	TNK1 (ENSSTOG00000007672) #13	TMEM95 (ENSSTOG00000030735) #14	KCTD11 (ENSSTOG00000022117) #15	ACAP1 (ENSSTOG00000007588) #16	ENSSTOG00000024856	NEURL4 (ENSSTOG00000007523) #17	GPS2 (ENSSTOG00000020716) #18	ENSSTOG00000020652 #19	YBX2 (ENSSTOG00000008630) #20	SLC2A4 (ENSSTOG00000008616) #21	CLDN7 (ENSSTOG00000001197) #22	ELP5 (ENSSTOG00000001194) #23	CTDNEP1 (ENSSTOG00000020211) #24	GABARAP (ENSSTOG00000024711) #25	PHF23 (ENSSTOG00000022541) #26	DVL2 (ENSSTOG00000008603) #27	ACADVL (ENSSTOG00000008582) #28	DLG4 (ENSSTOG00000008559) #29	ASGR1 (ENSSTOG00000008541) #30	ENSSTOG00000029607	ASGR2 (ENSSTOG00000027578) #31	SLC16A11 (ENSSTOG00000024724) #34	SLC16A13 (ENSSTOG00000025634) #35	BCL6B (ENSSTOG00000006365) #36	C17orf49 (ENSSTOG00000023220)	RNASEK (ENSSTOG00000006350) #37
Arctic ground squirrel	MODERN SPECIES	77	TMEM102 (ENSUPAG00010015024)	ENSUPAG00010014988 #8	NLGN2 (ENSUPAG00010014953) #10	TMEM256 (ENSUPAG00010014946) #11	PLSCR3 (ENSUPAG00010014906) #12	TNK1 (ENSUPAG00010014874) #13	TMEM95 (ENSUPAG00010014860) #14	KCTD11 (ENSUPAG00010014856) #15	ACAP1 (ENSUPAG00010014808) #16	ENSUPAG00010014750	NEURL4 (ENSUPAG00010014532) #17	GPS2 (ENSUPAG00010014484) #18	ENSUPAG00010014451 #19	YBX2 (ENSUPAG00010014438) #20	SLC2A4 (ENSUPAG00010014416) #21	CLDN7 (ENSUPAG00010014405) #22	ELP5 (ENSUPAG00010014373) #23	CTDNEP1 (ENSUPAG00010014358) #24	GABARAP (ENSUPAG00010014341) #25	PHF23 (ENSUPAG00010014321) #26	DVL2 (ENSUPAG00010014286) #27	ACADVL (ENSUPAG00010014220) #28	DLG4 (ENSUPAG00010014047) #29	ASGR1 (ENSUPAG00010013997) #30	ASGR2 (ENSUPAG00010013970) #31	CLEC10A (ENSUPAG00010013954) #32
Eurasian red squirrel	MODERN SPECIES	12	TMEM102 (ENSSVLG00005006623)	SPEM2 (ENSSVLG00005006720) #8	SPEM1 (ENSSVLG00005006743) #9	NLGN2 (ENSSVLG00005006780) #10	TMEM256 (ENSSVLG00005006818) #11	PLSCR3 (ENSSVLG00005006852) #12	TNK1 (ENSSVLG00005006897) #13	TMEM95 (ENSSVLG00005006999) #14	KCTD11 (ENSSVLG00005007059) #15	ACAP1 (ENSSVLG00005007080) #16	ENSSVLG00005007180	NEURL4 (ENSSVLG00005007333) #17	GPS2 (ENSSVLG00005007679) #18	ENSSVLG00005007756 #19	SLC2A4 (ENSSVLG00005007987) #21	CLDN7 (ENSSVLG00005008134) #22	ELP5 (ENSSVLG00005008205) #23	CTDNEP1 (ENSSVLG00005008230) #24	ENSSVLG00005008294 #25	PHF23 (ENSSVLG00005008326) #26	DVL2 (ENSSVLG00005008374) #27	ACADVL (ENSSVLG00005008422) #28	DLG4 (ENSSVLG00005008616) #29	ASGR1 (ENSSVLG00005008890) #30	ASGR2 (ENSSVLG00005009019) #31	ENSSVLG00005009098 #32	ENSSVLG00005009269	SLC16A11 (ENSSVLG00005009286) #34	SLC16A13 (ENSSVLG00005009320) #35	BCL6B (ENSSVLG00005009352) #36	C17orf49 (ENSSVLG00005009498)
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000161727.a #30	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Myomorpha	ANCESTRAL SPECIES		ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000161727.a #30	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Muroidea	ANCESTRAL SPECIES		ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000161727.a #30	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000161727.a #30	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Cricetidae	ANCESTRAL SPECIES		ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.k.a #19	ENSGT00390000003738.a.a.b.l #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Chinese hamster chok1gshd	MODERN SPECIES	229	Spem2 (ENSCGRG00001024800) #8	Nlgn2 (ENSCGRG00001001172) #10	Spem1 (ENSCGRG00001020989) #9	Tmem256 (ENSCGRG00001011894) #11	Plscr3 (ENSCGRG00001012938) #12	Tnk1 (ENSCGRG00001016895) #13	Tmem95 (ENSCGRG00001018271) #14	Kctd11 (ENSCGRG00001010083) #15	Acap1 (ENSCGRG00001021682) #16	2810408A11Rik (ENSCGRG00001007134)	Neurl4 (ENSCGRG00001004519) #17	Gps2 (ENSCGRG00001024581) #18	ENSCGRG00001022619 #19	Ybx2 (ENSCGRG00001000751) #20	Slc2a4 (ENSCGRG00001014901) #21	Cldn7 (ENSCGRG00001017802) #22	Elp5 (ENSCGRG00001022354) #23	Ctdnep1 (ENSCGRG00001018299) #24	Gabarap (ENSCGRG00001022984) #25	Phf23 (ENSCGRG00001012022) #26	Dvl2 (ENSCGRG00001003711) #27	Acadvl (ENSCGRG00001012717) #28	Dlg4 (ENSCGRG00001023688) #29	Asgr1 (ENSCGRG00001018875) #30	Asgr2 (ENSCGRG00001021621) #31	ENSCGRG00001010936	ENSCGRG00001023521 #32	ENSCGRG00001024648 #32	Slc16a11 (ENSCGRG00001002856) #34	Slc16a13 (ENSCGRG00001023380) #35	Bcl6b (ENSCGRG00001013044) #36
Golden Hamster	MODERN SPECIES	627	Chrnb1 (ENSMAUG00000020789)	Fgf11 (ENSMAUG00000007523)	Tmem102 (ENSMAUG00000008694)	Spem2 (ENSMAUG00000012929) #8	Spem1 (ENSMAUG00000012060) #9	Nlgn2 (ENSMAUG00000022123) #10	Tmem256 (ENSMAUG00000019936) #11	Plscr3 (ENSMAUG00000021880) #12	Tnk1 (ENSMAUG00000002211) #13	Kctd11 (ENSMAUG00000010535) #15	Acap1 (ENSMAUG00000020062) #16	ENSMAUG00000001091 #19	ENSMAUG00000022188	Ybx2 (ENSMAUG00000022062) #20	Slc2a4 (ENSMAUG00000016931) #21	Cldn7 (ENSMAUG00000010692) #22	Ctdnep1 (ENSMAUG00000009307) #24	Gabarap (ENSMAUG00000009749) #25	Phf23 (ENSMAUG00000022236) #26	Acadvl (ENSMAUG00000022104) #28	Dlg4 (ENSMAUG00000019871) #29	Asgr1 (ENSMAUG00000007436) #30	Slc16a11 (ENSMAUG00000020604) #34	Slc16a13 (ENSMAUG00000020213) #35	Bcl6b (ENSMAUG00000018651) #36	0610010K14Rik (ENSMAUG00000022065)	Rnasek (ENSMAUG00000021868) #37	Alox12 (ENSMAUG00000021600)	Alox12e (ENSMAUG00000020297)	Pelp1 (ENSMAUG00000012869)	Med11 (ENSMAUG00000020621)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Northern American deer mouse	MODERN SPECIES	21	Spem2 (ENSPEMG00000001259) #8	Spem1 (ENSPEMG00000010523) #9	Nlgn2 (ENSPEMG00000017384) #10	Tmem256 (ENSPEMG00000011910) #11	Plscr3 (ENSPEMG00000012190) #12	Tnk1 (ENSPEMG00000019033) #13	Tmem95 (ENSPEMG00000019221) #14	Kctd11 (ENSPEMG00000006289) #15	Acap1 (ENSPEMG00000001348) #16	2810408A11Rik (ENSPEMG00000019019)	Neurl4 (ENSPEMG00000008124) #17	Gps2 (ENSPEMG00000009124) #18	ENSPEMG00000017457 #19	Ybx2 (ENSPEMG00000018382) #20	ENSPEMG00000019078 #21	Cldn7 (ENSPEMG00000025686) #22	ENSPEMG00000031352	Ctdnep1 (ENSPEMG00000008546) #24	Gabarap (ENSPEMG00000028299) #25	Phf23 (ENSPEMG00000016623) #26	Dvl2 (ENSPEMG00000013323) #27	ENSPEMG00000017590 #28	Dlg4 (ENSPEMG00000010669) #29	Asgr1 (ENSPEMG00000015766) #30	Asgr2 (ENSPEMG00000016855) #31	ENSPEMG00000012334 #32	ENSPEMG00000016916 #32	Slc16a11 (ENSPEMG00000008237) #34	Slc16a13 (ENSPEMG00000007251) #35	Bcl6b (ENSPEMG00000016932) #36	0610010K14Rik (ENSPEMG00000018977)
Prairie vole	MODERN SPECIES	15	Spem2 (ENSMOCG00000017128) #8	Spem1 (ENSMOCG00000006619) #9	Nlgn2 (ENSMOCG00000002770) #10	Tmem256 (ENSMOCG00000022774) #11	Plscr3 (ENSMOCG00000021492) #12	Tnk1 (ENSMOCG00000015877) #13	Tmem95 (ENSMOCG00000012325) #14	Kctd11 (ENSMOCG00000002277) #15	Acap1 (ENSMOCG00000019117) #16	ENSMOCG00000012374	Neurl4 (ENSMOCG00000007919) #17	ENSMOCG00000018481 #18	Eif5a (ENSMOCG00000017275) #19	Ybx2 (ENSMOCG00000013958) #20	Slc2a4 (ENSMOCG00000022395) #21	Cldn7 (ENSMOCG00000013341) #22	Elp5 (ENSMOCG00000015136) #23	Ctdnep1 (ENSMOCG00000020823) #24	Gabarap (ENSMOCG00000020064) #25	Phf23 (ENSMOCG00000008393) #26	Dvl2 (ENSMOCG00000013386) #27	Acadvl (ENSMOCG00000010073) #28	Dlg4 (ENSMOCG00000012746) #29	Asgr1 (ENSMOCG00000022069) #30	ENSMOCG00000001963	Asgr2 (ENSMOCG00000011407) #31	ENSMOCG00000004972 #32	ENSMOCG00000020735 #32	Slc16a11 (ENSMOCG00000019282) #34	Slc16a13 (ENSMOCG00000002637) #35	Bcl6b (ENSMOCG00000019797) #36
Murinae	ANCESTRAL SPECIES	7	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000161727.a #30	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Mus	ANCESTRAL SPECIES	2	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036.h #32	ENSGT00940000161727.a #30	ENSGT00940000162036.g #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.m #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036.h #32	ENSGT00940000161727.a #30	ENSGT00940000162036.g #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.m #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036.h #32	ENSGT00940000161727.a #30	ENSGT00940000162036.g #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Mouse	MODERN SPECIES	2	Spem2 (ENSMUSG00000044084) #8	Spem1 (ENSMUSG00000041165) #9	Nlgn2 (ENSMUSG00000051790) #10	Tmem256 (ENSMUSG00000070394) #11	Plscr3 (ENSMUSG00000019461) #12	Tnk1 (ENSMUSG00000001583) #13	Tmem95 (ENSMUSG00000094845) #14	Kctd11 (ENSMUSG00000046731) #15	Acap1 (ENSMUSG00000001588) #16	2810408A11Rik (ENSMUSG00000018570)	Neurl4 (ENSMUSG00000047284) #17	Gps2 (ENSMUSG00000023170) #18	Eif5a (ENSMUSG00000078812) #19	Ybx2 (ENSMUSG00000018554) #20	Slc2a4 (ENSMUSG00000018566) #21	Cldn7 (ENSMUSG00000018569) #22	Elp5 (ENSMUSG00000018565) #23	Ctdnep1 (ENSMUSG00000018559) #24	Gabarap (ENSMUSG00000018567) #25	Phf23 (ENSMUSG00000018572) #26	Dvl2 (ENSMUSG00000020888) #27	Acadvl (ENSMUSG00000018574) #28	Dlg4 (ENSMUSG00000020886) #29	Asgr1 (ENSMUSG00000020884) #30	Asgr2 (ENSMUSG00000040963) #31	Mgl2 (ENSMUSG00000040950) #32	Clec10a (ENSMUSG00000000318) #32	Slc16a11 (ENSMUSG00000040938) #34	Slc16a13 (ENSMUSG00000044367) #35	Bcl6b (ENSMUSG00000000317) #36	0610010K14Rik (ENSMUSG00000020831)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.m #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727.b #30	ENSGT00940000162310 #31	ENSGT00940000162036.h #32	ENSGT00940000161727.a #30	ENSGT00940000162036.g #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
spretus	MODERN SPECIES	2	Spem2 (MGP_SPRETEiJ_G0017429) #8	Spem1 (MGP_SPRETEiJ_G0017430) #9	Nlgn2 (MGP_SPRETEiJ_G0017431) #10	Tmem256 (MGP_SPRETEiJ_G0017432) #11	Plscr3 (MGP_SPRETEiJ_G0017433) #12	Tnk1 (MGP_SPRETEiJ_G0017434) #13	Tmem95 (MGP_SPRETEiJ_G0017435) #14	Kctd11 (MGP_SPRETEiJ_G0017436) #15	Acap1 (MGP_SPRETEiJ_G0017437) #16	2810408A11Rik (MGP_SPRETEiJ_G0017438)	Neurl4 (MGP_SPRETEiJ_G0017439) #17	Gps2 (MGP_SPRETEiJ_G0017440) #18	Eif5a (MGP_SPRETEiJ_G0017441) #19	Ybx2 (MGP_SPRETEiJ_G0017442) #20	Slc2a4 (MGP_SPRETEiJ_G0017443) #21	Cldn7 (MGP_SPRETEiJ_G0017444) #22	Elp5 (MGP_SPRETEiJ_G0017445) #23	Ctdnep1 (MGP_SPRETEiJ_G0017446) #24	Gabarap (MGP_SPRETEiJ_G0017447) #25	Phf23 (MGP_SPRETEiJ_G0017448) #26	Dvl2 (MGP_SPRETEiJ_G0017449) #27	Acadvl (MGP_SPRETEiJ_G0017450) #28	Dlg4 (MGP_SPRETEiJ_G0017451) #29	Asgr1 (MGP_SPRETEiJ_G0017452) #30	Asgr2 (MGP_SPRETEiJ_G0017453) #31	MGP_SPRETEiJ_G0017454 #32	Clec10a (MGP_SPRETEiJ_G0017455) #32	Slc16a11 (MGP_SPRETEiJ_G0017456) #34	Slc16a13 (MGP_SPRETEiJ_G0017457) #35	Bcl6b (MGP_SPRETEiJ_G0017458) #36	0610010K14Rik (MGP_SPRETEiJ_G0017459)
Steppe mouse	MODERN SPECIES	2655																Cldn7 (ENSMSIG00000019075) #22	Elp5 (ENSMSIG00000019096) #23	ENSMSIG00000019119 #24	ENSMSIG00000019179 #25	Phf23 (ENSMSIG00000019212) #26	Dvl2 (ENSMSIG00000019225) #27	Acadvl (ENSMSIG00000019318) #28	Dlg4 (ENSMSIG00000019442) #29	Asgr1 (ENSMSIG00000019751) #30	Asgr2 (ENSMSIG00000019851) #31	Clec10a (ENSMSIG00000019875) #32	ENSMSIG00000019908 #30	ENSMSIG00000019917 #34	Slc16a13 (ENSMSIG00000019931) #35	Bcl6b (ENSMSIG00000019940) #36	0610010K14Rik (ENSMSIG00000019980)
Ryukyu mouse	MODERN SPECIES	2	Spem2 (MGP_CAROLIEiJ_G0016593) #8	Spem1 (MGP_CAROLIEiJ_G0016594) #9	Nlgn2 (MGP_CAROLIEiJ_G0016595) #10	Tmem256 (MGP_CAROLIEiJ_G0016596) #11	Plscr3 (MGP_CAROLIEiJ_G0016597) #12	Tnk1 (MGP_CAROLIEiJ_G0016598) #13	Tmem95 (MGP_CAROLIEiJ_G0016599) #14	Kctd11 (MGP_CAROLIEiJ_G0016600) #15	Acap1 (MGP_CAROLIEiJ_G0016601) #16	2810408A11Rik (MGP_CAROLIEiJ_G0016602)	Neurl4 (MGP_CAROLIEiJ_G0016603) #17	Gps2 (MGP_CAROLIEiJ_G0016604) #18	Eif5a (MGP_CAROLIEiJ_G0016605) #19	Ybx2 (MGP_CAROLIEiJ_G0016606) #20	Slc2a4 (MGP_CAROLIEiJ_G0016607) #21	Cldn7 (MGP_CAROLIEiJ_G0016608) #22	Elp5 (MGP_CAROLIEiJ_G0016609) #23	MGP_CAROLIEiJ_G0016610 #24	Gabarap (MGP_CAROLIEiJ_G0016611) #25	Phf23 (MGP_CAROLIEiJ_G0016612) #26	Dvl2 (MGP_CAROLIEiJ_G0016613) #27	Acadvl (MGP_CAROLIEiJ_G0016614) #28	Dlg4 (MGP_CAROLIEiJ_G0016615) #29	Asgr1 (MGP_CAROLIEiJ_G0016616) #30	Asgr2 (MGP_CAROLIEiJ_G0016617) #31	MGP_CAROLIEiJ_G0016618 #30	MGP_CAROLIEiJ_G0016619 #32	Slc16a11 (MGP_CAROLIEiJ_G0016620) #34	Slc16a13 (MGP_CAROLIEiJ_G0016621) #35	Bcl6b (MGP_CAROLIEiJ_G0016622) #36	0610010K14Rik (MGP_CAROLIEiJ_G0016624)
Shrew mouse	MODERN SPECIES	5	Spem2 (MGP_PahariEiJ_G0017724) #8	Spem1 (MGP_PahariEiJ_G0017725) #9	Nlgn2 (MGP_PahariEiJ_G0017726) #10	Tmem256 (MGP_PahariEiJ_G0017727) #11	Plscr3 (MGP_PahariEiJ_G0017728) #12	Tnk1 (MGP_PahariEiJ_G0017729) #13	Tmem95 (MGP_PahariEiJ_G0017730) #14	Kctd11 (MGP_PahariEiJ_G0017731) #15	Acap1 (MGP_PahariEiJ_G0017732) #16	2810408A11Rik (MGP_PahariEiJ_G0017733)	Neurl4 (MGP_PahariEiJ_G0017734) #17	Gps2 (MGP_PahariEiJ_G0017735) #18	Eif5a (MGP_PahariEiJ_G0017736) #19	Ybx2 (MGP_PahariEiJ_G0017737) #20	Slc2a4 (MGP_PahariEiJ_G0017738) #21	Cldn7 (MGP_PahariEiJ_G0017739) #22	Elp5 (MGP_PahariEiJ_G0017740) #23	Ctdnep1 (MGP_PahariEiJ_G0017741) #24	Gabarap (MGP_PahariEiJ_G0017742) #25	Phf23 (MGP_PahariEiJ_G0017743) #26	Dvl2 (MGP_PahariEiJ_G0017744) #27	Acadvl (MGP_PahariEiJ_G0017745) #28	Dlg4 (MGP_PahariEiJ_G0017746) #29	Asgr1 (MGP_PahariEiJ_G0017747) #30	Asgr2 (MGP_PahariEiJ_G0017748) #31	MGP_PahariEiJ_G0017749 #30	Clec10a (MGP_PahariEiJ_G0017750) #32	Slc16a11 (MGP_PahariEiJ_G0017751) #34	Slc16a13 (MGP_PahariEiJ_G0017752) #35	Bcl6b (MGP_PahariEiJ_G0017753) #36	0610010K14Rik (MGP_PahariEiJ_G0017755)
Rat	MODERN SPECIES	1	Spem1 (ENSRNOG00000015419) #9	Nlgn2 (ENSRNOG00000015430) #10	Tmem256 (ENSRNOG00000037540) #11	Plscr3 (ENSRNOG00000027914) #12	Tnk1 (ENSRNOG00000015578) #13	Kctd11 (ENSRNOG00000015669) #15	Tmem95 (ENSRNOG00000043507) #14	Acap1 (ENSRNOG00000015674) #16	LOC497940 (ENSRNOG00000015975)	Neurl4 (ENSRNOG00000016109) #17	Gps2 (ENSRNOG00000016360) #18	Eif5a (ENSRNOG00000016478) #19	Ybx2 (ENSRNOG00000017117) #20	Slc2a4 (ENSRNOG00000017226) #21	AABR07029863.4 (ENSRNOG00000061193)	Cldn7 (ENSRNOG00000017325) #22	Elp5 (ENSRNOG00000027628) #23	Ctdnep1 (ENSRNOG00000017352) #24	Gabarap (ENSRNOG00000017417) #25	Phf23 (ENSRNOG00000017657) #26	Dvl2 (ENSRNOG00000017915) #27	Acadvl (ENSRNOG00000018114) #28	Dlg4 (ENSRNOG00000018526) #29	Asgr1 (ENSRNOG00000018693) #30	Asgr2 (ENSRNOG00000030726) #31	Clec10a (ENSRNOG00000018715) #32	Slc16a13 (ENSRNOG00000018785) #35	Slc16a11 (ENSRNOG00000018748) #34	Bcl6b (ENSRNOG00000059956) #36	RGD1308134 (ENSRNOG00000018829)	Alox12 (ENSRNOG00000027037)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1746	Spem2 (ENSNGAG00000020043) #8	Spem1 (ENSNGAG00000005715) #9	Nlgn2 (ENSNGAG00000009216) #10	Tmem256 (ENSNGAG00000010038) #11	Plscr3 (ENSNGAG00000010681) #12	Tnk1 (ENSNGAG00000021925) #13	Tmem95 (ENSNGAG00000022940) #14	Kctd11 (ENSNGAG00000010241) #15	Acap1 (ENSNGAG00000019699) #16	2810408A11Rik (ENSNGAG00000020654)	Neurl4 (ENSNGAG00000023441) #17	Gps2 (ENSNGAG00000010025) #18	Eif5a (ENSNGAG00000011003) #19	Ybx2 (ENSNGAG00000011707) #20	Slc2a4 (ENSNGAG00000013748) #21	Cldn7 (ENSNGAG00000015141) #22	Elp5 (ENSNGAG00000016691) #23	Ctdnep1 (ENSNGAG00000018537) #24	Gabarap (ENSNGAG00000019179) #25	Phf23 (ENSNGAG00000019840) #26	Dvl2 (ENSNGAG00000021399) #27	Acadvl (ENSNGAG00000009001) #28	Dlg4 (ENSNGAG00000014371) #29	Asgr1 (ENSNGAG00000022038) #30	Asgr2 (ENSNGAG00000023552) #31	ENSNGAG00000024124 #30	Slc16a13 (ENSNGAG00000024247) #35	Slc16a11 (ENSNGAG00000024329) #34	Bcl6b (ENSNGAG00000017106) #36	0610010K14Rik (ENSNGAG00000019863)	Rnasek (ENSNGAG00000021419) #37
Lesser Egyptian jerboa	MODERN SPECIES	168	Spem2 (ENSJJAG00000016321) #8	Spem1 (ENSJJAG00000016635) #9	Nlgn2 (ENSJJAG00000020774) #10	Tmem256 (ENSJJAG00000020908) #11	Plscr3 (ENSJJAG00000021244) #12	Tnk1 (ENSJJAG00000021919) #13	Tmem95 (ENSJJAG00000000201) #14	Kctd11 (ENSJJAG00000013654) #15	Acap1 (ENSJJAG00000000486) #16	2810408A11Rik (ENSJJAG00000002636)	Neurl4 (ENSJJAG00000008773) #17	Gps2 (ENSJJAG00000011156) #18	Eif5a (ENSJJAG00000011834) #19	Ybx2 (ENSJJAG00000013072) #20	Slc2a4 (ENSJJAG00000013398) #21	Cldn7 (ENSJJAG00000023638) #22	Elp5 (ENSJJAG00000000138) #23	Ctdnep1 (ENSJJAG00000000567) #24	Gabarap (ENSJJAG00000002820) #25	Phf23 (ENSJJAG00000003815) #26	Dvl2 (ENSJJAG00000005340) #27	Acadvl (ENSJJAG00000010548) #28	Dlg4 (ENSJJAG00000012014) #29	Asgr1 (ENSJJAG00000013892) #30	ENSJJAG00000014250
Kangaroo rat	MODERN SPECIES	338	Tmem102 (ENSDORG00000008659)	Spem2 (ENSDORG00000008657) #8	Spem1 (ENSDORG00000008656) #9	Nlgn2 (ENSDORG00000008653) #10	Neurl4 (ENSDORG00000000321) #17	Tmem256 (ENSDORG00000008651) #11	Plscr3 (ENSDORG00000008647) #12	Tnk1 (ENSDORG00000008646) #13	Tmem95 (ENSDORG00000000329) #14	Kctd11 (ENSDORG00000000326) #15	Acap1 (ENSDORG00000000323) #16	Gps2 (ENSDORG00000000318) #18	Eif5a (ENSDORG00000000315) #19	Ybx2 (ENSDORG00000010882) #20	Slc2a4 (ENSDORG00000010881) #21	Cldn7 (ENSDORG00000005235) #22	Elp5 (ENSDORG00000005233) #23	Ctdnep1 (ENSDORG00000005231) #24	Phf23 (ENSDORG00000005227) #26	Dvl2 (ENSDORG00000005221) #27	Acadvl (ENSDORG00000005215) #28	Dlg4 (ENSDORG00000029363) #29	Asgr1 (ENSDORG00000006793) #30	Asgr2 (ENSDORG00000012345) #31	Slc16a11 (ENSDORG00000005540) #34	Slc16a13 (ENSDORG00000005539) #35	Bcl6b (ENSDORG00000005538) #36	0610010K14Rik (ENSDORG00000005536)	Rnasek (ENSDORG00000023374) #37	Alox12 (ENSDORG00000005528)	ENSDORG00000015933
Lagomorpha	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37	ENSGT00940000155191.b
Rabbit	MODERN SPECIES	10	FGF11 (ENSOCUG00000004215)	TMEM102 (ENSOCUG00000004211)	SPEM2 (ENSOCUG00000005547) #8	SPEM1 (ENSOCUG00000005542) #9	NLGN2 (ENSOCUG00000005539) #10	ENSOCUG00000005534 #11	PLSCR3 (ENSOCUG00000000983) #12	TNK1 (ENSOCUG00000025052) #13	TMEM95 (ENSOCUG00000021294) #14	ACAP1 (ENSOCUG00000015300) #16	ENSOCUG00000032904	GPS2 (ENSOCUG00000024249) #18	ENSOCUG00000015255 #19	YBX2 (ENSOCUG00000015064) #20	SLC2A4 (ENSOCUG00000015240) #21	CLDN7 (ENSOCUG00000007002) #22	ELP5 (ENSOCUG00000007000) #23	CTDNEP1 (ENSOCUG00000027494) #24	GABARAP (ENSOCUG00000006997) #25	PHF23 (ENSOCUG00000006990) #26	DVL2 (ENSOCUG00000006978) #27	ACADVL (ENSOCUG00000006966) #28	DLG4 (ENSOCUG00000025772) #29	ASGR1 (ENSOCUG00000025713) #30	ASGR2 (ENSOCUG00000024115) #31	SLC16A11 (ENSOCUG00000007017) #34	SLC16A13 (ENSOCUG00000007013) #35	C17orf49 (ENSOCUG00000025664)	RNASEK (ENSOCUG00000032834) #37	ALOX12 (ENSOCUG00000021659)	ALOX15 (ENSOCUG00000022477)
Pika	MODERN SPECIES	3617																ENSOPRG00000002863 #22	ENSOPRG00000002843 #23	ENSOPRG00000002811 #24
Tree shrew	MODERN SPECIES	1429												ENSTBEG00000001682 #19	YBX2 (ENSTBEG00000001266) #20	SLC2A4 (ENSTBEG00000000866) #21	ENSTBEG00000000807	CLDN7 (ENSTBEG00000000624) #22	ELP5 (ENSTBEG00000000525) #23
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Eulipotyphla	ANCESTRAL SPECIES	6								ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT01050000245793	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28
Hedgehog	MODERN SPECIES	6542																CLDN7 (ENSEEUG00000006415) #22	ENSEEUG00000006363
Common shrew	MODERN SPECIES	708										TMEM95 (ENSSARG00000000540) #14	ACAP1 (ENSSARG00000000520) #16	NEURL4 (ENSSARG00000000497) #17	ENSSARG00000000495 #19	YBX2 (ENSSARG00000000488) #20	SLC2A4 (ENSSARG00000000479) #21	CLDN7 (ENSSARG00000000476) #22	ENSSARG00000000470	GABARAP (ENSSARG00000000468) #25	PHF23 (ENSSARG00000000449) #26	DVL2 (ENSSARG00000000435) #27	ACADVL (ENSSARG00000000400) #28
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Suina	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Chacoan peccary	MODERN SPECIES	67	SPEM2 (ENSCWAG00000003617) #8	SPEM1 (ENSCWAG00000003610) #9	NLGN2 (ENSCWAG00000003600) #10	TMEM256 (ENSCWAG00000003593) #11	PLSCR3 (ENSCWAG00000003581) #12	TNK1 (ENSCWAG00000003555) #13	TMEM95 (ENSCWAG00000003541) #14	KCTD11 (ENSCWAG00000003533) #15	ACAP1 (ENSCWAG00000003510) #16	ENSCWAG00000003461	NEURL4 (ENSCWAG00000003360) #17	ENSCWAG00000003311 #18	ENSCWAG00000003284 #19	YBX2 (ENSCWAG00000003262) #20	SLC2A4 (ENSCWAG00000003179) #21	CLDN7 (ENSCWAG00000003146) #22	ELP5 (ENSCWAG00000003121) #23	CTDNEP1 (ENSCWAG00000003100) #24	GABARAP (ENSCWAG00000003088) #25	PHF23 (ENSCWAG00000003062) #26	DVL2 (ENSCWAG00000003040) #27	ACADVL (ENSCWAG00000002995) #28	DLG4 (ENSCWAG00000002442) #29	ASGR1 (ENSCWAG00000002332) #30	ASGR2 (ENSCWAG00000002299) #31	CLEC10A (ENSCWAG00000002278) #32	SLC16A11 (ENSCWAG00000002252) #34	SLC16A13 (ENSCWAG00000002235) #35	BCL6B (ENSCWAG00000002215) #36	C17orf49 (ENSCWAG00000002185)	RNASEK (ENSCWAG00000002170) #37
Pig	MODERN SPECIES	3	FGF11 (ENSSSCG00000051794)	ENSSSCG00000058172	TMEM102 (ENSSSCG00000028725)	SPEM2 (ENSSSCG00000024584) #8	PLSCR3 (ENSSSCG00000029391) #12	TNK1 (ENSSSCG00000026142) #13	TMEM95 (ENSSSCG00000017945) #14	KCTD11 (ENSSSCG00000042089) #15	ACAP1 (ENSSSCG00000017943) #16	ENSSSCG00000017942	NEURL4 (ENSSSCG00000017941) #17	GPS2 (ENSSSCG00000017940) #18	ENSSSCG00000038359 #19	YBX2 (ENSSSCG00000017938) #20	SLC2A4 (ENSSSCG00000023915) #21	CLDN7 (ENSSSCG00000017934) #22	ELP5 (ENSSSCG00000027514) #23	CTDNEP1 (ENSSSCG00000017935) #24	GABARAP (ENSSSCG00000017936) #25	PHF23 (ENSSSCG00000017937) #26	DVL2 (ENSSSCG00000025689) #27	ACADVL (ENSSSCG00000017947) #28	DLG4 (ENSSSCG00000024285) #29	ASGR1 (ENSSSCG00000024926) #30	ASGR2 (ENSSSCG00000017932) #31	CLEC10A (ENSSSCG00000056060) #32	SLC16A11 (ENSSSCG00000017925) #34	SLC16A13 (ENSSSCG00000017926) #35	BCL6B (ENSSSCG00000017927) #36	C17orf49 (ENSSSCG00000017928)	RNASEK (ENSSSCG00000017929) #37
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Cetacea	ANCESTRAL SPECIES	5	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Blue whale	MODERN SPECIES	12	SPEM1 (ENSBMSG00010021944) #9	NLGN2 (ENSBMSG00010021940) #10	ENSBMSG00010021932 #11	PLSCR3 (ENSBMSG00010021922) #12	TNK1 (ENSBMSG00010021918) #13	TMEM95 (ENSBMSG00010021909) #14	KCTD11 (ENSBMSG00010021906) #15	ACAP1 (ENSBMSG00010021900) #16	ENSBMSG00010021881	NEURL4 (ENSBMSG00010021858) #17	GPS2 (ENSBMSG00010021850) #18	ENSBMSG00010021837 #19	ENSBMSG00010021828 #20	ENSBMSG00010021822 #20	SLC2A4 (ENSBMSG00010021819) #21	CLDN7 (ENSBMSG00010021815) #22	ELP5 (ENSBMSG00010021799) #23	CTDNEP1 (ENSBMSG00010021782) #24	GABARAP (ENSBMSG00010021779) #25	PHF23 (ENSBMSG00010021764) #26	ENSBMSG00010021758 #27	ENSBMSG00010021756 #27	ACADVL (ENSBMSG00010021746) #28	DLG4 (ENSBMSG00010021144) #29	ASGR2 (ENSBMSG00010020744) #31	SLC16A11 (ENSBMSG00010020651) #34	SLC16A13 (ENSBMSG00010020623) #35	BCL6B (ENSBMSG00010020606) #36	C17orf49 (ENSBMSG00010020546)	RNASEK (ENSBMSG00010020512) #37	ALOX12 (ENSBMSG00010020498)
Odontoceti	ANCESTRAL SPECIES	17	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.c #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Sperm whale	MODERN SPECIES	252														YBX2 (ENSPCTG00005013246) #20	SLC2A4 (ENSPCTG00005013364) #21	CLDN7 (ENSPCTG00005013537) #22	ELP5 (ENSPCTG00005013717) #23	CTDNEP1 (ENSPCTG00005013857) #24	GABARAP (ENSPCTG00005014005) #25	PHF23 (ENSPCTG00005014142) #26	DVL2 (ENSPCTG00005014347) #27	ACADVL (ENSPCTG00005014428) #28
Odontoceti_a	ANCESTRAL SPECIES	18	ENSGT00940000158058	ENSGT00510000049389 #9	ENSGT00940000160598.q #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b.c #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Dolphin	MODERN SPECIES	1362			ENSTTRG00000009796 #9	ENSTTRG00000009795 #10	TMEM256 (ENSTTRG00000009794) #11	PLSCR3 (ENSTTRG00000009793) #12	TNK1 (ENSTTRG00000009791) #13	ENSTTRG00000009790 #14	KCTD11 (ENSTTRG00000009789) #15	ACAP1 (ENSTTRG00000009788) #16	NEURL4 (ENSTTRG00000009786) #17	GPS2 (ENSTTRG00000009784) #18	ENSTTRG00000009783 #19	YBX2 (ENSTTRG00000009780) #20	SLC2A4 (ENSTTRG00000009776) #21	CLDN7 (ENSTTRG00000009775) #22	ELP5 (ENSTTRG00000009772) #23	CTDNEP1 (ENSTTRG00000009770) #24	GABARAP (ENSTTRG00000009768) #25	PHF23 (ENSTTRG00000009766) #26	DVL2 (ENSTTRG00000009756) #27	ACADVL (ENSTTRG00000009737) #28	DLG4 (ENSTTRG00000009704) #29	ASGR1 (ENSTTRG00000009672) #30	ASGR2 (ENSTTRG00000009646) #31
Odontoceti_b	ANCESTRAL SPECIES	20	ENSGT00950000183608	ENSGT00510000049558.a #8	ENSGT00510000049389 #9	ENSGT00940000160598.q #10	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049.r #18	ENSGT00390000003738.a.a.b.c #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Monodontidae	ANCESTRAL SPECIES	21	ENSGT01050000244976.b.b.b.a.a.a.a.a	ENSGT00950000183608	ENSGT00510000049558.a #8	ENSGT00510000049389 #9	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049.r #18	ENSGT00390000003738.a.a.b.c #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Narwhal	MODERN SPECIES	316	ENSMMNG00015017486	ENSMMNG00015017515	ENSMMNG00015017576	ENSMMNG00015017618 #11	PLSCR3 (ENSMMNG00015017648) #12	TNK1 (ENSMMNG00015017686) #13	TMEM95 (ENSMMNG00015017714) #14	KCTD11 (ENSMMNG00015017769) #15	ACAP1 (ENSMMNG00015017802) #16	ENSMMNG00015017846	NEURL4 (ENSMMNG00015017966) #17	ENSMMNG00015018411 #18	ENSMMNG00015018476 #19	YBX2 (ENSMMNG00015018537) #20	SLC2A4 (ENSMMNG00015018591) #21	CLDN7 (ENSMMNG00015018623) #22	ELP5 (ENSMMNG00015018672) #23	CTDNEP1 (ENSMMNG00015018745) #24	GABARAP (ENSMMNG00015018803) #25	PHF23 (ENSMMNG00015018878) #26	DVL2 (ENSMMNG00015018997) #27	ACADVL (ENSMMNG00015019102) #28	DLG4 (ENSMMNG00015019382) #29	ASGR1 (ENSMMNG00015019627) #30	ENSMMNG00015019661	ASGR2 (ENSMMNG00015019675) #31	CLEC10A (ENSMMNG00015019698) #32	SLC16A11 (ENSMMNG00015019733) #34	SLC16A13 (ENSMMNG00015019762) #35	BCL6B (ENSMMNG00015019792) #36	C17orf49 (ENSMMNG00015019895)
Beluga whale	MODERN SPECIES	43	POLR2A (ENSDLEG00000021049)	ENSDLEG00000021044	ZBTB4 (ENSDLEG00000021042)	ENSDLEG00000021039 #11	PLSCR3 (ENSDLEG00000021033) #12	TNK1 (ENSDLEG00000021019) #13	TMEM95 (ENSDLEG00000021008) #14	ACAP1 (ENSDLEG00000021002) #16	ENSDLEG00000020994	NEURL4 (ENSDLEG00000020984) #17	ENSDLEG00000020982 #18	ENSDLEG00000020979	ENSDLEG00000020976 #19	YBX2 (ENSDLEG00000020968) #20	SLC2A4 (ENSDLEG00000020954) #21	CLDN7 (ENSDLEG00000020941) #22	ELP5 (ENSDLEG00000020933) #23	CTDNEP1 (ENSDLEG00000020918) #24	GABARAP (ENSDLEG00000020910) #25	PHF23 (ENSDLEG00000020903) #26	DVL2 (ENSDLEG00000020853) #27	ACADVL (ENSDLEG00000020522) #28	DLG4 (ENSDLEG00000018956) #29	ASGR2 (ENSDLEG00000018738) #31	CLEC10A (ENSDLEG00000018726) #32	SLC16A11 (ENSDLEG00000018719) #34	SLC16A13 (ENSDLEG00000018712) #35	BCL6B (ENSDLEG00000018691) #36	C17orf49 (ENSDLEG00000018641)	RNASEK (ENSDLEG00000018622) #37	ALOX12 (ENSDLEG00000018597)
Vaquita	MODERN SPECIES	12	ENSPSNG00000011985	ENSPSNG00000012036 #8	SPEM1 (ENSPSNG00000012095) #9	ENSPSNG00000012182 #10	PLSCR3 (ENSPSNG00000012274) #12	TNK1 (ENSPSNG00000012413) #13	TMEM95 (ENSPSNG00000012657) #14	KCTD11 (ENSPSNG00000012799) #15	ACAP1 (ENSPSNG00000012902) #16	ENSPSNG00000013030	NEURL4 (ENSPSNG00000013138) #17	ENSPSNG00000014284 #18	ENSPSNG00000014364 #19	YBX2 (ENSPSNG00000014540) #20	SLC2A4 (ENSPSNG00000014687) #21	CLDN7 (ENSPSNG00000014878) #22	ELP5 (ENSPSNG00000015066) #23	CTDNEP1 (ENSPSNG00000015367) #24	GABARAP (ENSPSNG00000015452) #25	PHF23 (ENSPSNG00000015556) #26	DVL2 (ENSPSNG00000015755) #27	ACADVL (ENSPSNG00000015875) #28	DLG4 (ENSPSNG00000016309) #29	ASGR1 (ENSPSNG00000016894) #30	ASGR2 (ENSPSNG00000016960) #31	CLEC10A (ENSPSNG00000017153) #32	SLC16A11 (ENSPSNG00000017413) #34	SLC16A13 (ENSPSNG00000017493) #35	BCL6B (ENSPSNG00000017539) #36	ENSPSNG00000017667	RNASEK (ENSPSNG00000017798) #37
Pecora	ANCESTRAL SPECIES	1	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Yarkand deer	MODERN SPECIES	28	SPEM2 (ENSCHYG00000008464) #8	SPEM1 (ENSCHYG00000008442) #9	NLGN2 (ENSCHYG00000008415) #10	ENSCHYG00000008386 #11	PLSCR3 (ENSCHYG00000008333) #12	TNK1 (ENSCHYG00000008282) #13	TMEM95 (ENSCHYG00000008232) #14	KCTD11 (ENSCHYG00000008213) #15	ACAP1 (ENSCHYG00000008077) #16	ENSCHYG00000008013	NEURL4 (ENSCHYG00000007461) #17	GPS2 (ENSCHYG00000007354) #18	ENSCHYG00000007256 #19	YBX2 (ENSCHYG00000007191) #20	SLC2A4 (ENSCHYG00000007096) #21	CLDN7 (ENSCHYG00000007033) #22	ELP5 (ENSCHYG00000006986) #23	CTDNEP1 (ENSCHYG00000006924) #24	GABARAP (ENSCHYG00000006879) #25	PHF23 (ENSCHYG00000006709) #26	DVL2 (ENSCHYG00000006392) #27	ACADVL (ENSCHYG00000022231) #28	DLG4 (ENSCHYG00000020909) #29	ENSCHYG00000020655 #30	ENSCHYG00000020619	ENSCHYG00000020562	ASGR2 (ENSCHYG00000020490) #31	CLEC10A (ENSCHYG00000020300) #32	SLC16A11 (ENSCHYG00000020413) #34	SLC16A13 (ENSCHYG00000020250) #35	BCL6B (ENSCHYG00000020161) #36
Percora_a	ANCESTRAL SPECIES	2	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Siberian musk deer	MODERN SPECIES	1135	SPEM2 (ENSMMSG00000011652) #8	SPEM1 (ENSMMSG00000011630) #9	NLGN2 (ENSMMSG00000011606) #10	ENSMMSG00000011580 #11	PLSCR3 (ENSMMSG00000011542) #12	TNK1 (ENSMMSG00000011445) #13	TMEM95 (ENSMMSG00000011410) #14	KCTD11 (ENSMMSG00000011389) #15	ACAP1 (ENSMMSG00000011353) #16	ENSMMSG00000011324	NEURL4 (ENSMMSG00000010852) #17	GPS2 (ENSMMSG00000010738) #18	ENSMMSG00000010649 #19	YBX2 (ENSMMSG00000010606) #20	SLC2A4 (ENSMMSG00000010516) #21	CLDN7 (ENSMMSG00000010449) #22	ELP5 (ENSMMSG00000010403) #23	CTDNEP1 (ENSMMSG00000010304) #24	ENSMMSG00000010211 #25	PHF23 (ENSMMSG00000010084) #26	DVL2 (ENSMMSG00000010027) #27	ACADVL (ENSMMSG00000009809) #28	DLG4 (ENSMMSG00000009318) #29	ASGR1 (ENSMMSG00000009174) #30	ASGR2 (ENSMMSG00000009118) #31	SLC16A11 (ENSMMSG00000008996) #34	SLC16A13 (ENSMMSG00000008955) #35	BCL6B (ENSMMSG00000008917) #36	C17orf49 (ENSMMSG00000008857)	RNASEK (ENSMMSG00000008768) #37	ALOX12 (ENSMMSG00000008692)
Bovidae	ANCESTRAL SPECIES	2	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Caprinae	ANCESTRAL SPECIES	1	ENSGT00950000183608	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020014662	SPEM2 (ENSOARG00020014676) #8	SPEM1 (ENSOARG00020014716) #9	EIF5A (ENSOARG00020014758) #19	NLGN2 (ENSOARG00020014909) #10	TMEM256 (ENSOARG00020014986) #11	PLSCR3 (ENSOARG00020015038) #12	TNK1 (ENSOARG00020015110) #13	TMEM95 (ENSOARG00020015173) #14	ACAP1 (ENSOARG00020015243) #16	ENSOARG00020015367	NEURL4 (ENSOARG00020016228) #17	GPS2 (ENSOARG00020017230) #18	YBX2 (ENSOARG00020017354) #20	SLC2A4 (ENSOARG00020017448) #21	CLDN7 (ENSOARG00020017686) #22	ELP5 (ENSOARG00020017795) #23	CTDNEP1 (ENSOARG00020017866) #24	GABARAP (ENSOARG00020017939) #25	PHF23 (ENSOARG00020018070) #26	DVL2 (ENSOARG00020018284) #27	ACADVL (ENSOARG00020018512) #28	DLG4 (ENSOARG00020019051) #29	ENSOARG00020021001 #30	ASGR2 (ENSOARG00020021046) #31	CLEC10A (ENSOARG00020021092) #32	SLC16A11 (ENSOARG00020021137) #34	SLC16A13 (ENSOARG00020021188) #35	BCL6B (ENSOARG00020021221) #36	C17orf49 (ENSOARG00020021294)	RNASEK (ENSOARG00020021492) #37
Goat	MODERN SPECIES	10	TMEM102 (ENSCHIG00000014552)	SPEM2 (ENSCHIG00000016697) #8	SPEM1 (ENSCHIG00000023917) #9	NLGN2 (ENSCHIG00000021280) #10	TMEM256 (ENSCHIG00000013855) #11	PLSCR3 (ENSCHIG00000021167) #12	TNK1 (ENSCHIG00000008836) #13	TMEM95 (ENSCHIG00000024443) #14	ACAP1 (ENSCHIG00000017749) #16	ENSCHIG00000024951	NEURL4 (ENSCHIG00000018834) #17	GPS2 (ENSCHIG00000004094) #18	ENSCHIG00000025365 #19	YBX2 (ENSCHIG00000016407) #20	SLC2A4 (ENSCHIG00000020405) #21	CLDN7 (ENSCHIG00000025376) #22	ELP5 (ENSCHIG00000010521) #23	CTDNEP1 (ENSCHIG00000006144) #24	GABARAP (ENSCHIG00000021470) #25	PHF23 (ENSCHIG00000007385) #26	DVL2 (ENSCHIG00000025716) #27	ACADVL (ENSCHIG00000025328) #28	DLG4 (ENSCHIG00000009974) #29	ASGR1 (ENSCHIG00000016569) #30	ASGR2 (ENSCHIG00000003690) #31	SLC16A11 (ENSCHIG00000019140) #34	SLC16A13 (ENSCHIG00000019049) #35	BCL6B (ENSCHIG00000013253) #36	C17orf49 (ENSCHIG00000019869)	RNASEK (ENSCHIG00000009505) #37	ALOX12 (ENSCHIG00000025520)
Bovinae	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B.cb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Bos	ANCESTRAL SPECIES	1	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210.g #23	ENSGT01040000240503.B.cb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Bos_b	ANCESTRAL SPECIES	15	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210.g #23	ENSGT01040000240503.B.cb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Cow	MODERN SPECIES	10	TMEM102 (ENSBTAG00000031737)	SPEM2 (ENSBTAG00000048416) #8	SPEM1 (ENSBTAG00000020253) #9	NLGN2 (ENSBTAG00000020252) #10	TMEM256 (ENSBTAG00000031752) #11	PLSCR3 (ENSBTAG00000017747) #12	TNK1 (ENSBTAG00000017739) #13	TMEM95 (ENSBTAG00000052395) #14	KCTD11 (ENSBTAG00000010532) #16	ENSBTAG00000045892	NEURL4 (ENSBTAG00000010519) #17	GPS2 (ENSBTAG00000010513) #18	EIF5A (ENSBTAG00000002018) #19	YBX2 (ENSBTAG00000009126) #20	SLC2A4 (ENSBTAG00000009190) #21	CLDN7 (ENSBTAG00000019448) #22	ELP5 (ENSBTAG00000019446) #23	CTDNEP1 (ENSBTAG00000019443) #24	GABARAP (ENSBTAG00000014883) #25	PHF23 (ENSBTAG00000014881) #26	DVL2 (ENSBTAG00000003075) #27	ACADVL (ENSBTAG00000003072) #28	DLG4 (ENSBTAG00000002564) #29	ASGR1 (ENSBTAG00000012071) #30	ASGR2 (ENSBTAG00000025101) #31	CLEC10A (ENSBTAG00000017895) #32	SLC16A11 (ENSBTAG00000020852) #34	SLC16A13 (ENSBTAG00000020853) #35	BCL6B (ENSBTAG00000020854) #36	C19H17orf49 (ENSBTAG00000021931)	RNASEK (ENSBTAG00000021932) #37
Hybrid Bos Indicus	MODERN SPECIES	10	TMEM102 (ENSBIXG00005007617)	SPEM2 (ENSBIXG00005023189) #8	SPEM1 (ENSBIXG00005023199) #9	NLGN2 (ENSBIXG00005003966) #10	TMEM256 (ENSBIXG00005023227) #11	PLSCR3 (ENSBIXG00005003986) #12	TNK1 (ENSBIXG00005023345) #13	TMEM95 (ENSBIXG00005023385) #14	KCTD11 (ENSBIXG00005023396) #15	ENSBIXG00005007232	ACAP1 (ENSBIXG00005023621) #16	NEURL4 (ENSBIXG00005023902) #17	GPS2 (ENSBIXG00005023970) #18	ENSBIXG00005024068 #19	YBX2 (ENSBIXG00005024122) #20	CLDN7 (ENSBIXG00005024167) #22	SLC2A4 (ENSBIXG00005004176) #21	CTDNEP1 (ENSBIXG00005024608) #24	GABARAP (ENSBIXG00005024650) #25	PHF23 (ENSBIXG00005024750) #26	DVL2 (ENSBIXG00005024794) #27	ACADVL (ENSBIXG00005024981) #28	DLG4 (ENSBIXG00005025633) #29	ASGR1 (ENSBIXG00005025712) #30	ASGR2 (ENSBIXG00005025811) #31	CLEC10A (ENSBIXG00005025845) #32	SLC16A11 (ENSBIXG00005025874) #34	SLC16A13 (ENSBIXG00005025912) #35	BCL6B (ENSBIXG00005025984) #36	C17orf49 (ENSBIXG00005026070)	ALOX12 (ENSBIXG00005026201)
Bos_a	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334.s #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210.h #23	ENSGT00390000009210.g #23	ENSGT01040000240503.B.cb.a #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
Wild yak	MODERN SPECIES	286	SPEM1 (ENSBMUG00000006590) #9	NLGN2 (ENSBMUG00000006594) #10	ENSBMUG00000006607 #11	PLSCR3 (ENSBMUG00000006627) #12	TNK1 (ENSBMUG00000006642) #13	TMEM95 (ENSBMUG00000006650) #14	KCTD11 (ENSBMUG00000006660) #15	ACAP1 (ENSBMUG00000006676) #16	ENSBMUG00000006684	ENSBMUG00000006688	NEURL4 (ENSBMUG00000006717) #17	GPS2 (ENSBMUG00000006753) #18	ENSBMUG00000006766 #19	YBX2 (ENSBMUG00000006793) #20	SLC2A4 (ENSBMUG00000006799) #21	CLDN7 (ENSBMUG00000006825) #22	ELP5 (ENSBMUG00000006843) #23	CTDNEP1 (ENSBMUG00000006861) #24	GABARAP (ENSBMUG00000006873) #25	PHF23 (ENSBMUG00000006921) #26	DVL2 (ENSBMUG00000006989) #27	ENSBMUG00000007006 #28
Domestic yak	MODERN SPECIES	10	TMEM102 (ENSBGRG00000019375)	SPEM2 (ENSBGRG00000019492) #8	SPEM1 (ENSBGRG00000019536) #9	NLGN2 (ENSBGRG00000019591) #10	TMEM256 (ENSBGRG00000019702) #11	PLSCR3 (ENSBGRG00000019762) #12	TNK1 (ENSBGRG00000019860) #13	TMEM95 (ENSBGRG00000020097) #14	ACAP1 (ENSBGRG00000020229) #16	ENSBGRG00000020404	NEURL4 (ENSBGRG00000020466) #17	GPS2 (ENSBGRG00000021162) #18	ENSBGRG00000021275 #19	YBX2 (ENSBGRG00000021388) #20	SLC2A4 (ENSBGRG00000021445) #21	CLDN7 (ENSBGRG00000021527) #22	ENSBGRG00000021626 #23	ENSBGRG00000021678 #24	GABARAP (ENSBGRG00000021792) #25	PHF23 (ENSBGRG00000021863) #26	DVL2 (ENSBGRG00000022017) #27	ACADVL (ENSBGRG00000022258) #28	DLG4 (ENSBGRG00000023062) #29	ASGR1 (ENSBGRG00000024416) #30	ASGR2 (ENSBGRG00000024459) #31	CLEC10A (ENSBGRG00000024558) #32	SLC16A11 (ENSBGRG00000024648) #34	SLC16A13 (ENSBGRG00000024689) #35	BCL6B (ENSBGRG00000024699) #36	C17orf49 (ENSBGRG00000024751)	RNASEK (ENSBGRG00000024780) #37
American bison	MODERN SPECIES	3166	SPEM2 (ENSBBBG00000015116) #8	SPEM1 (ENSBBBG00000015101) #9	ENSBBBG00000015099 #10	TMEM256 (ENSBBBG00000003744) #11	PLSCR3 (ENSBBBG00000015093) #12	TNK1 (ENSBBBG00000015053) #13	TMEM95 (ENSBBBG00000000804) #14	KCTD11 (ENSBBBG00000015018) #15	ACAP1 (ENSBBBG00000015001) #16	ENSBBBG00000003626	NEURL4 (ENSBBBG00000000855) #17	GPS2 (ENSBBBG00000001059) #18	ENSBBBG00000001095 #19	YBX2 (ENSBBBG00000001150) #20	SLC2A4 (ENSBBBG00000001170) #21	ENSBBBG00000001226 #22	ELP5 (ENSBBBG00000001242) #23	ENSBBBG00000003673 #24	GABARAP (ENSBBBG00000003665) #25	PHF23 (ENSBBBG00000003661) #26	DVL2 (ENSBBBG00000014849) #27	ACADVL (ENSBBBG00000014766) #28	DLG4 (ENSBBBG00000014616) #29	ENSBBBG00000003298 #30	ASGR2 (ENSBBBG00000003294) #31	CLEC10A (ENSBBBG00000003285) #32	SLC16A11 (ENSBBBG00000014363) #34	SLC16A13 (ENSBBBG00000014357) #35	BCL6B (ENSBBBG00000014349) #36	C17orf49 (ENSBBBG00000014332)	RNASEK (ENSBBBG00000014328) #37
Camelidae	ANCESTRAL SPECIES	34	ENSGT00950000183608	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36
Arabian camel	MODERN SPECIES	7	ENSCDRG00005007431	TMEM102 (ENSCDRG00005007414)	SPEM2 (ENSCDRG00005007316) #8	SPEM1 (ENSCDRG00005007307) #9	TMEM256 (ENSCDRG00005007283) #11	PLSCR3 (ENSCDRG00005020933) #12	TNK1 (ENSCDRG00005020924) #13	TMEM95 (ENSCDRG00005020912) #14	ACAP1 (ENSCDRG00005020896) #16	ENSCDRG00005020888	NEURL4 (ENSCDRG00005020846) #17	GPS2 (ENSCDRG00005020826) #18	ENSCDRG00005020816 #19	YBX2 (ENSCDRG00005020806) #20	SLC2A4 (ENSCDRG00005020775) #21	CLDN7 (ENSCDRG00005020758) #22	ELP5 (ENSCDRG00005020747) #23	ENSCDRG00005020733 #24	GABARAP (ENSCDRG00005020726) #25	PHF23 (ENSCDRG00005020637) #26	DVL2 (ENSCDRG00005020618) #27	ACADVL (ENSCDRG00005020549) #28	DLG4 (ENSCDRG00005018407) #29	ASGR1 (ENSCDRG00005018292) #30	ASGR2 (ENSCDRG00005018256) #31	CLEC10A (ENSCDRG00005018221) #32	SLC16A11 (ENSCDRG00005018182) #34	SLC16A13 (ENSCDRG00005018168) #35	BCL6B (ENSCDRG00005018114) #36	ENSCDRG00005018086	ENSCDRG00005018040 #37
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Carnivora	ANCESTRAL SPECIES	24	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Caniformia	ANCESTRAL SPECIES	27	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Caniformia_b	ANCESTRAL SPECIES	28	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.f #37
Ursidae	ANCESTRAL SPECIES	31	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535.p #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.f #37
Ursus	ANCESTRAL SPECIES	24	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT01050000245793	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535.p #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721
American black bear	MODERN SPECIES	196														YBX2 (ENSUAMG00000014725) #20	SLC2A4 (ENSUAMG00000014728) #21	CLDN7 (ENSUAMG00000014731) #22	ENSUAMG00000014735	CTDNEP1 (ENSUAMG00000014737) #24	GABARAP (ENSUAMG00000014741) #25	PHF23 (ENSUAMG00000014762) #26	DVL2 (ENSUAMG00000014764) #27	ACADVL (ENSUAMG00000014768) #28	DLG4 (ENSUAMG00000014776) #29	ASGR1 (ENSUAMG00000014781) #30	ASGR2 (ENSUAMG00000014786) #31
Giant Panda	MODERN SPECIES	8	TMEM102 (ENSAMEG00000030198)	SPEM2 (ENSAMEG00000016687) #8	SPEM1 (ENSAMEG00000016685) #9	NLGN2 (ENSAMEG00000025939) #10	PLSCR3 (ENSAMEG00000016659) #12	TNK1 (ENSAMEG00000016650) #13	TMEM95 (ENSAMEG00000016648) #14	KCTD11 (ENSAMEG00000030333) #15	ACAP1 (ENSAMEG00000016614) #16	ENSAMEG00000016605	NEURL4 (ENSAMEG00000016578) #17	GPS2 (ENSAMEG00000016576) #18	ENSAMEG00000023620 #19	YBX2 (ENSAMEG00000029011) #20	SLC2A4 (ENSAMEG00000016542) #21	CLDN7 (ENSAMEG00000016535) #22	ELP5 (ENSAMEG00000029386) #23	CTDNEP1 (ENSAMEG00000016529) #24	GABARAP (ENSAMEG00000016523) #25	PHF23 (ENSAMEG00000016519) #26	DVL2 (ENSAMEG00000016497) #27	ACADVL (ENSAMEG00000016448) #28	DLG4 (ENSAMEG00000016396) #29	ASGR1 (ENSAMEG00000016382) #30	ASGR2 (ENSAMEG00000016377) #31	CLEC10A (ENSAMEG00000028679) #32	SLC16A11 (ENSAMEG00000016346) #34	SLC16A13 (ENSAMEG00000016333) #35	BCL6B (ENSAMEG00000016319) #36	C17orf49 (ENSAMEG00000016312)	ENSAMEG00000029141 #37
Mustelinae	ANCESTRAL SPECIES	27	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664.f #37
Ferret	MODERN SPECIES	237	TMEM102 (ENSMPUG00000009776)	ENSMPUG00000009781 #7	SPEM2 (ENSMPUG00000009788) #8	NLGN2 (ENSMPUG00000009795) #10	PLSCR3 (ENSMPUG00000009978) #12	TNK1 (ENSMPUG00000010053) #13	ACAP1 (ENSMPUG00000010117) #16	ENSMPUG00000010131	NEURL4 (ENSMPUG00000010156) #17	ENSMPUG00000019730	ENSMPUG00000010298 #18	ENSMPUG00000010364 #19	YBX2 (ENSMPUG00000010386) #20	SLC2A4 (ENSMPUG00000010408) #21	ELP5 (ENSMPUG00000010415) #23	CLDN7 (ENSMPUG00000010463) #22	CTDNEP1 (ENSMPUG00000010467) #24	GABARAP (ENSMPUG00000010473) #25	PHF23 (ENSMPUG00000010478) #26	DVL2 (ENSMPUG00000010482) #27	ACADVL (ENSMPUG00000010603) #28	DLG4 (ENSMPUG00000010615) #29	ASGR1 (ENSMPUG00000010621) #30	ASGR2 (ENSMPUG00000010653) #31	CLEC10A (ENSMPUG00000010660) #32	SLC16A13 (ENSMPUG00000010664) #35	SLC16A11 (ENSMPUG00000010666) #34	BCL6B (ENSMPUG00000010670) #36	C17orf49 (ENSMPUG00000010673)	ENSMPUG00000010687	ALOX12 (ENSMPUG00000010689)
American mink	MODERN SPECIES	204	SPEM2 (ENSNVIG00000003178) #8	SPEM1 (ENSNVIG00000003159) #9	ENSNVIG00000003148 #10	CQ061 (ENSNVIG00000003126) #11	PLSCR3 (ENSNVIG00000003088) #12	TNK1 (ENSNVIG00000002992) #13	TMEM95 (ENSNVIG00000002969) #14	KCTD11 (ENSNVIG00000002955) #15	ACAP1 (ENSNVIG00000002925) #16	ENSNVIG00000002885	NEURL4 (ENSNVIG00000002658) #17	GPS2 (ENSNVIG00000002621) #18	ENSNVIG00000002591 #19	ENSNVIG00000002573 #20	SLC2A4 (ENSNVIG00000002528) #21	CLDN7 (ENSNVIG00000002508) #22	ELP5 (ENSNVIG00000002421) #23	CNEP1 (ENSNVIG00000002384) #24	ENSNVIG00000002363	PHF23 (ENSNVIG00000002353) #26	DVL2 (ENSNVIG00000002277) #27	ACADVL (ENSNVIG00000000794) #28	DLG4 (ENSNVIG00000000149) #29	ASGR2 (ENSNVIG00000000124) #31	CLC10 (ENSNVIG00000000116) #32	SLC16A11 (ENSNVIG00000000108) #34	SLC16A13 (ENSNVIG00000000096) #35	BCL6B (ENSNVIG00000020335) #36	ENSNVIG00000020282 #37	ALOX12 (ENSNVIG00000020245)	ENSNVIG00000020239
Canidae	ANCESTRAL SPECIES	30	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Dog	MODERN SPECIES	33	TMEM102 (ENSCAFG00845022362)	SPEM2 (ENSCAFG00845022220) #8	SPEM1 (ENSCAFG00845022190) #9	NLGN2 (ENSCAFG00845022150) #10	TMEM256 (ENSCAFG00845022094) #11	PLSCR3 (ENSCAFG00845022022) #12	TNK1 (ENSCAFG00845021921) #13	TMEM95 (ENSCAFG00845021838) #14	KCTD11 (ENSCAFG00845021807) #15	ACAP1 (ENSCAFG00845021641) #16	NEURL4 (ENSCAFG00845021188) #17	GPS2 (ENSCAFG00845021055) #18	EIF5A (ENSCAFG00845020953) #19	YBX2 (ENSCAFG00845020876) #20	SLC2A4 (ENSCAFG00845020724) #21	CLDN7 (ENSCAFG00845020640) #22	ELP5 (ENSCAFG00845020498) #23	CTDNEP1 (ENSCAFG00845020365) #24	GABARAP (ENSCAFG00845020288) #25	PHF23 (ENSCAFG00845020187) #26	DVL2 (ENSCAFG00845020074) #27	ACADVL (ENSCAFG00845019619) #28	DLG4 (ENSCAFG00845018777) #29	ASGR1 (ENSCAFG00845018304) #30	ASGR2 (ENSCAFG00845017847) #31	CLEC10A (ENSCAFG00845017661) #32	SLC16A11 (ENSCAFG00845017537) #34	SLC16A13 (ENSCAFG00845017438) #35	BCL6B (ENSCAFG00845017365) #36	C5H17orf49 (ENSCAFG00845017228)	RNASEK (ENSCAFG00845017097) #37
Dingo	MODERN SPECIES	373	SPEM2 (ENSCAFG00020008429) #8	SPEM1 (ENSCAFG00020008432) #9	NLGN2 (ENSCAFG00020008436) #10	ENSCAFG00020008449 #11	PLSCR3 (ENSCAFG00020008451) #12	TNK1 (ENSCAFG00020008454) #13	TMEM95 (ENSCAFG00020008455) #14	KCTD11 (ENSCAFG00020008470) #15	ACAP1 (ENSCAFG00020008474) #16	ENSCAFG00020008512	NEURL4 (ENSCAFG00020008545) #17	GPS2 (ENSCAFG00020008815) #18	ENSCAFG00020008847 #19	YBX2 (ENSCAFG00020008884) #20	SLC2A4 (ENSCAFG00020008980) #21	CLDN7 (ENSCAFG00020010303) #22	ELP5 (ENSCAFG00020010306) #23	CTDNEP1 (ENSCAFG00020010308) #24	GABARAP (ENSCAFG00020010313) #25	PHF23 (ENSCAFG00020010314) #26	DVL2 (ENSCAFG00020010329) #27	ACADVL (ENSCAFG00020010520) #28	DLG4 (ENSCAFG00020010529) #29	ASGR1 (ENSCAFG00020010538) #30	ASGR2 (ENSCAFG00020010540) #31	CLEC10A (ENSCAFG00020010589) #32	SLC16A11 (ENSCAFG00020010595) #34	SLC16A13 (ENSCAFG00020010598) #35	BCL6B (ENSCAFG00020010599) #36	C17orf49 (ENSCAFG00020010639)	RNASEK (ENSCAFG00020010649) #37
Red fox	MODERN SPECIES	52	SPEM2 (ENSVVUG00000027867) #8	SPEM1 (ENSVVUG00000027866) #9	NLGN2 (ENSVVUG00000027863) #10	ENSVVUG00000027862 #11	PLSCR3 (ENSVVUG00000027861) #12	TNK1 (ENSVVUG00000027852) #13	ENSVVUG00000027848 #14	KCTD11 (ENSVVUG00000027847) #15	ACAP1 (ENSVVUG00000027844) #16	ENSVVUG00000027843	NEURL4 (ENSVVUG00000027834) #17	GPS2 (ENSVVUG00000027833) #18	ENSVVUG00000027832 #19	ENSVVUG00000027830 #20	SLC2A4 (ENSVVUG00000027827) #21	CLDN7 (ENSVVUG00000027824) #22	ELP5 (ENSVVUG00000027822) #23	CTDNEP1 (ENSVVUG00000027819) #24	GABARAP (ENSVVUG00000027812) #25	PHF23 (ENSVVUG00000027809) #26	DVL2 (ENSVVUG00000027808) #27	ACADVL (ENSVVUG00000027653) #28	DLG4 (ENSVVUG00000027620) #29	ASGR1 (ENSVVUG00000027615) #30	ASGR2 (ENSVVUG00000027614) #31	CLEC10A (ENSVVUG00000027612) #32	SLC16A11 (ENSVVUG00000027609) #34	SLC16A13 (ENSVVUG00000027608) #35	BCL6B (ENSVVUG00000027606) #36	C17orf49 (ENSVVUG00000027599)	ALOX12 (ENSVVUG00000027589)
Felidae	DUPLICATION
Felidae	ANCESTRAL SPECIES																	ENSGT00940000160672.c #22
Panthera	ANCESTRAL SPECIES																	ENSGT00940000160672.c #22
Tiger	MODERN SPECIES	361	ENSPTIG00000020354	ENSPTIG00000005583	ENSPTIG00000007434	ENSPTIG00000008415	CHRNB1 (ENSPTIG00000009669)	ENSPTIG00000012444	ENSPTIG00000013663	TMEM256 (ENSPTIG00000016291) #11	TNK1 (ENSPTIG00000016665) #13	TMEM95 (ENSPTIG00000018690) #14	KCTD11 (ENSPTIG00000000855) #15	ACAP1 (ENSPTIG00000020662) #16	ENSPTIG00000009653 #18	ENSPTIG00000010219 #19	SLC2A4 (ENSPTIG00000014127) #21	ENSPTIG00000016017 #22	ELP5 (ENSPTIG00000017367) #23	CTDNEP1 (ENSPTIG00000006733) #24	ENSPTIG00000008435	PHF23 (ENSPTIG00000009384) #26	DVL2 (ENSPTIG00000016716) #27	DLG4 (ENSPTIG00000021800) #29	ENSPTIG00000022113 #32	SLC16A11 (ENSPTIG00000001119) #34	SLC16A13 (ENSPTIG00000004460) #35	BCL6B (ENSPTIG00000005476) #36	C17orf49 (ENSPTIG00000007009)	RNASEK (ENSPTIG00000007947) #37	ALOX12 (ENSPTIG00000009455)	ARRB2 (ENSPTIG00000011951)	MED11 (ENSPTIG00000017423)
Felidae	DUPLICATION
Felidae	ANCESTRAL SPECIES	26	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672.d.a #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Panthera	ANCESTRAL SPECIES	25	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672.d.a #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Panthera_a	ANCESTRAL SPECIES	28	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00900000143511	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672.d.a #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
lion	MODERN SPECIES	14	SPEM1 (ENSPLOG00000021691) #9	NLGN2 (ENSPLOG00000021709) #10	TMEM256 (ENSPLOG00000021736) #11	PLSCR3 (ENSPLOG00000021754) #12	TNK1 (ENSPLOG00000021811) #13	TMEM95 (ENSPLOG00000021833) #14	KCTD11 (ENSPLOG00000021862) #15	ACAP1 (ENSPLOG00000021892) #16	ENSPLOG00000021934	NEURL4 (ENSPLOG00000022005) #17	GPS2 (ENSPLOG00000022098) #18	ENSPLOG00000022122 #19	ENSPLOG00000022141	YBX2 (ENSPLOG00000022153) #20	SLC2A4 (ENSPLOG00000011121) #21	CLDN7 (ENSPLOG00000011296) #22	ELP5 (ENSPLOG00000011384) #23	CTDNEP1 (ENSPLOG00000011458) #24	GABARAP (ENSPLOG00000011500) #25	PHF23 (ENSPLOG00000011594) #26	DVL2 (ENSPLOG00000011811) #27	ACADVL (ENSPLOG00000011896) #28	DLG4 (ENSPLOG00000012400) #29	ASGR1 (ENSPLOG00000012704) #30	ASGR2 (ENSPLOG00000012902) #31	ENSPLOG00000013019 #32	SLC16A11 (ENSPLOG00000013159) #34	SLC16A13 (ENSPLOG00000013252) #35	BCL6B (ENSPLOG00000013284) #36	C17orf49 (ENSPLOG00000013376)	RNASEK (ENSPLOG00000013471) #37
leopard	MODERN SPECIES	61	ENSPPRG00000016939	SPEM3 (ENSPPRG00000024038) #7	SPEM2 (ENSPPRG00000024115) #8	SPEM1 (ENSPPRG00000024396) #9	NLGN2 (ENSPPRG00000021351) #10	TMEM256 (ENSPPRG00000018439) #11	PLSCR3 (ENSPPRG00000016904) #12	TNK1 (ENSPPRG00000011921) #13	TMEM95 (ENSPPRG00000010755) #14	KCTD11 (ENSPPRG00000016621) #15	ACAP1 (ENSPPRG00000009789) #16	GPS2 (ENSPPRG00000003151) #18	ENSPPRG00000001944 #19	YBX2 (ENSPPRG00000000782) #20	SLC2A4 (ENSPPRG00000000403) #21	ENSPPRG00000022910 #22	ELP5 (ENSPPRG00000023883) #23	CTDNEP1 (ENSPPRG00000016200) #24	GABARAP (ENSPPRG00000014203) #25	PHF23 (ENSPPRG00000013604) #26	DVL2 (ENSPPRG00000011549) #27	DLG4 (ENSPPRG00000007755) #29	ASGR2 (ENSPPRG00000005075) #31	CLEC10A (ENSPPRG00000003304) #32	SLC16A11 (ENSPPRG00000001405) #34	SLC16A13 (ENSPPRG00000001041) #35	BCL6B (ENSPPRG00000001009) #36	C17orf49 (ENSPPRG00000000806)	RNASEK (ENSPPRG00000023471) #37	ALOX12 (ENSPPRG00000023711)	PELP1 (ENSPPRG00000024690)
Cat	MODERN SPECIES	245	TMEM102 (ENSFCAG00000009613)	SPEM2 (ENSFCAG00000012582) #8	SPEM1 (ENSFCAG00000044575) #9	NLGN2 (ENSFCAG00000031923) #10	TMEM256 (ENSFCAG00000029899) #11	PLSCR3 (ENSFCAG00000010894) #12	TNK1 (ENSFCAG00000010893) #13	TMEM95 (ENSFCAG00000010892) #14	ACAP1 (ENSFCAG00000010890) #16	ENSFCAG00000050178	NEURL4 (ENSFCAG00000010887) #17	GPS2 (ENSFCAG00000030260) #18	ENSFCAG00000010886 #19	YBX2 (ENSFCAG00000018097) #20	SLC2A4 (ENSFCAG00000003061) #21	CLDN7 (ENSFCAG00000031173) #22	ELP5 (ENSFCAG00000002827) #23	CTDNEP1 (ENSFCAG00000018399) #24	GABARAP (ENSFCAG00000030191) #25	PHF23 (ENSFCAG00000025727) #26	DVL2 (ENSFCAG00000024333) #27	ACADVL (ENSFCAG00000002826) #28	DLG4 (ENSFCAG00000002824) #29	ASGR1 (ENSFCAG00000037175) #30	SLC16A11 (ENSFCAG00000001354) #34	BCL6B (ENSFCAG00000001356) #36	CE1H17orf49 (ENSFCAG00000049344)	RNASEK (ENSFCAG00000001358) #37	ALOX12 (ENSFCAG00000001355)	PELP1 (ENSFCAG00000022191)	ARRB2 (ENSFCAG00000013022)
Felidae	ANCESTRAL SPECIES																	ENSGT00940000160672.d.b #22
Panthera	ANCESTRAL SPECIES																	ENSGT00940000160672.d.b #22
Panthera_a	ANCESTRAL SPECIES																	ENSGT00940000160672.d.b #22
leopard	MODERN SPECIES	172	SCRIB (ENSPPRG00000005252)	FAM83H (ENSPPRG00000005660)	ENSPPRG00000006128	CCDC166 (ENSPPRG00000006252)	ENSPPRG00000006461	ZNF623 (ENSPPRG00000017952)	ENSPPRG00000006499	GFUS (ENSPPRG00000006571)	PYCR3 (ENSPPRG00000007124)	TIGD5 (ENSPPRG00000018004)	ENSPPRG00000007970	NAPRT (ENSPPRG00000008927)	GSDMD (ENSPPRG00000011299)	ZC3H3 (ENSPPRG00000011707)	RHPN1 (ENSPPRG00000014507)	ENSPPRG00000015929 #22	ENSPPRG00000016348	ENSPPRG00000016530	GLI4 (ENSPPRG00000016835)	GPIHBP1 (ENSPPRG00000018096)	LY6H (ENSPPRG00000019245)	ENSPPRG00000019531	ENSPPRG00000022558
Tiger	MODERN SPECIES	358	SPATC1 (ENSPTIG00000020852)	GRINA (ENSPTIG00000000243)	ENSPTIG00000006447	ENSPTIG00000007265	PUF60 (ENSPTIG00000009795)	ENSPTIG00000014644	ENSPTIG00000021194	ENSPTIG00000001201	ZNF623 (ENSPTIG00000007289)	GFUS (ENSPTIG00000006785)	PYCR3 (ENSPTIG00000009262)	ENSPTIG00000010781	NAPRT (ENSPTIG00000013460)	ZC3H3 (ENSPTIG00000016438)	ENSPTIG00000017525	ENSPTIG00000018176 #22	ENSPTIG00000019116	GPIHBP1 (ENSPTIG00000020632)	LY6H (ENSPTIG00000021111)	ENSPTIG00000007419
Cat	MODERN SPECIES	249	SCRIB (ENSFCAG00000001044)	FAM83H (ENSFCAG00000025159)	MAPK15 (ENSFCAG00000046313)	ENSFCAG00000042746	ZNF623 (ENSFCAG00000041239)	GFUS (ENSFCAG00000001041)	PYCR3 (ENSFCAG00000001040)	TIGD5 (ENSFCAG00000001039)	EEF1D (ENSFCAG00000027237)	NAPRT (ENSFCAG00000001037)	MROH6 (ENSFCAG00000027723)	GSDMD (ENSFCAG00000013242)	ENSFCAG00000052780	ZC3H3 (ENSFCAG00000013238)	MAFA (ENSFCAG00000042412)	ENSFCAG00000050951 #22	ENSFCAG00000049557	RHPN1 (ENSFCAG00000010785)	ZNF696 (ENSFCAG00000044269)	GLI4 (ENSFCAG00000033573)	ZFP41 (ENSFCAG00000046632)	GPIHBP1 (ENSFCAG00000043732)	LY6H (ENSFCAG00000010480)	LY6L (ENSFCAG00000043161)	ENSFCAG00000053793	LY6E (ENSFCAG00000028394)	CYP11B1 (ENSFCAG00000018677)	GML (ENSFCAG00000045069)	ENSFCAG00000051543	LY6D (ENSFCAG00000042478)	ENSFCAG00000012001
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844.b #36	ENSGT00390000014721	ENSGT00390000009664 #37
Chiroptera	ANCESTRAL SPECIES	29	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844.b #36	ENSGT00390000009664 #37	ENSGT00390000014721	ENSGT00940000162807	ENSGT00730000111225
Microchiroptera	ANCESTRAL SPECIES		ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.a.b #31	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844.b #36	ENSGT00390000009664 #37	ENSGT00390000014721	ENSGT00940000155191.b
Greater horseshoe bat	MODERN SPECIES	13	SPEM3 (ENSRFEG00010013716) #7	SPEM2 (ENSRFEG00010013784) #8	SPEM1 (ENSRFEG00010013902) #9	NLGN2 (ENSRFEG00010013979) #10	TMEM256 (ENSRFEG00010014063) #11	PLSCR3 (ENSRFEG00010014123) #12	TNK1 (ENSRFEG00010014238) #13	TMEM95 (ENSRFEG00010014293) #14	ACAP1 (ENSRFEG00010014531) #16	ENSRFEG00010014623	NEURL4 (ENSRFEG00010014729) #17	GPS2 (ENSRFEG00010016061) #18	ENSRFEG00010016202 #19	YBX2 (ENSRFEG00010016386) #20	Slc2a4 (ENSRFEG00010010483) #21	CLDN7 (ENSRFEG00010010829) #22	ELP5 (ENSRFEG00010010931) #23	CTDNEP1 (ENSRFEG00010010984) #24	PHF23 (ENSRFEG00010011156) #26	DVL2 (ENSRFEG00010011518) #27	ACADVL (ENSRFEG00010011639) #28	DLG4 (ENSRFEG00010011756) #29	ASGR1 (ENSRFEG00010012624) #30	ENSRFEG00010012668	ASGR2 (ENSRFEG00010012739) #31	ENSRFEG00010013044 #32	ENSRFEG00010013071 #32	SLC16A11 (ENSRFEG00010013260) #34	SLC16A13 (ENSRFEG00010013416) #35	BCL6B (ENSRFEG00010013464) #36	C17orf49 (ENSRFEG00010013817)
Microbat	MODERN SPECIES	1616	POLR2A (ENSMLUG00000009088)	ZBTB4 (ENSMLUG00000009961)	CHRNB1 (ENSMLUG00000009921)	FGF11 (ENSMLUG00000009905)	PLSCR3 (ENSMLUG00000013303) #12	TNK1 (ENSMLUG00000013295) #13	TMEM95 (ENSMLUG00000013285) #14	KCTD11 (ENSMLUG00000029294) #15	ACAP1 (ENSMLUG00000013263) #16	ENSMLUG00000026735	NEURL4 (ENSMLUG00000013237) #17	GPS2 (ENSMLUG00000026169) #18	ENSMLUG00000013230 #19	YBX2 (ENSMLUG00000004686) #20	SLC2A4 (ENSMLUG00000004672) #21	CLDN7 (ENSMLUG00000004664) #22	ELP5 (ENSMLUG00000004657) #23	CTDNEP1 (ENSMLUG00000004636) #24	GABARAP (ENSMLUG00000004631) #25
Megabat	MODERN SPECIES	988	FGF11 (ENSPVAG00000005066)	TMEM102 (ENSPVAG00000005065)	SPEM2 (ENSPVAG00000005064) #8	SPEM1 (ENSPVAG00000005063) #9	NLGN2 (ENSPVAG00000005062) #10	TMEM256 (ENSPVAG00000005061) #11	PLSCR3 (ENSPVAG00000005060) #12	TNK1 (ENSPVAG00000005059) #13	TMEM95 (ENSPVAG00000005058) #14	ACAP1 (ENSPVAG00000005056) #16	NEURL4 (ENSPVAG00000005054) #17	GPS2 (ENSPVAG00000005052) #18	ENSPVAG00000005051 #19	YBX2 (ENSPVAG00000005050) #20	SLC2A4 (ENSPVAG00000005048) #21	CLDN7 (ENSPVAG00000005046) #22	ELP5 (ENSPVAG00000005045) #23	CTDNEP1 (ENSPVAG00000005044) #24	DVL2 (ENSPVAG00000005043) #27	ACADVL (ENSPVAG00000005042) #28	DLG4 (ENSPVAG00000005040) #29	ASGR1 (ENSPVAG00000005039) #30
Equus	ANCESTRAL SPECIES	31	ENSGT00950000183608	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310.b #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844.b #36	ENSGT00390000014721	ENSGT00390000009664 #37
Donkey	MODERN SPECIES	4	ENSEASG00005019083	SPEM2 (ENSEASG00005019077) #8	SPEM1 (ENSEASG00005027077) #9	NLGN2 (ENSEASG00005019070) #10	TMEM256 (ENSEASG00005019066) #11	PLSCR3 (ENSEASG00005019060) #12	TNK1 (ENSEASG00005019057) #13	KCTD11 (ENSEASG00005031326) #15	ACAP1 (ENSEASG00005019039) #16	ENSEASG00005019031	NEURL4 (ENSEASG00005018984) #17	ENSEASG00005018941 #18	ENSEASG00005018931 #19	YBX2 (ENSEASG00005018928) #20	SLC2A4 (ENSEASG00005018713) #21	CLDN7 (ENSEASG00005018688) #22	ELP5 (ENSEASG00005026605) #23	CTDNEP1 (ENSEASG00005018685) #24	GABARAP (ENSEASG00005028737) #25	PHF23 (ENSEASG00005018679) #26	DVL2 (ENSEASG00005018657) #27	ACADVL (ENSEASG00005018265) #28	DLG4 (ENSEASG00005017976) #29	ENSEASG00005033101 #30	ASGR2 (ENSEASG00005017930) #31	ENSEASG00005037122 #32	SLC16A11 (ENSEASG00005017919) #34	SLC16A13 (ENSEASG00005017917) #35	BCL6B (ENSEASG00005017913) #36	C17orf49 (ENSEASG00005030495)	RNASEK (ENSEASG00005017906) #37
Horse	MODERN SPECIES	2	ZBTB4 (ENSECAG00000018353)	CHRNB1 (ENSECAG00000018244)	TMEM102 (ENSECAG00000017412)	FGF11 (ENSECAG00000017426)	SPEM2 (ENSECAG00000003006) #8	TMEM256 (ENSECAG00000059628) #11	NLGN2 (ENSECAG00000016513) #10	PLSCR3 (ENSECAG00000015600) #12	TNK1 (ENSECAG00000015435) #13	KCTD11 (ENSECAG00000002911) #15	ACAP1 (ENSECAG00000014119) #16	NEURL4 (ENSECAG00000012093) #17	ENSECAG00000010480 #19	SLC2A4 (ENSECAG00000007684) #21	YBX2 (ENSECAG00000009996) #20	CLDN7 (ENSECAG00000007289) #22	ELP5 (ENSECAG00000031994) #23	CTDNEP1 (ENSECAG00000006787) #24	PHF23 (ENSECAG00000029915) #26	DVL2 (ENSECAG00000002833) #27	ACADVL (ENSECAG00000024844) #28	DLG4 (ENSECAG00000024301) #29	ASGR1 (ENSECAG00000024206) #30	ASGR2 (ENSECAG00000023898) #31	CLEC10A (ENSECAG00000023871) #32	BCL6B (ENSECAG00000023771) #35	C17orf49 (ENSECAG00000023364)	ALOX12 (ENSECAG00000022015)	SLC16A11 (ENSECAG00000023791) #34	ALOX15 (ENSECAG00000038698)	ARRB2 (ENSECAG00000018471)
Atlantogenata	ANCESTRAL SPECIES	37	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Xenarthra	ANCESTRAL SPECIES	77											ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37	ENSGT00940000155191.b
Armadillo	MODERN SPECIES	3361											NEURL4 (ENSDNOG00000025485) #17	GPS2 (ENSDNOG00000044904) #18	ENSDNOG00000033912 #19	YBX2 (ENSDNOG00000013746) #20	SLC2A4 (ENSDNOG00000013728) #21	CLDN7 (ENSDNOG00000045733) #22	ELP5 (ENSDNOG00000013687) #23	CTDNEP1 (ENSDNOG00000013673) #24	ENSDNOG00000011393 #26	DVL2 (ENSDNOG00000023990) #27	ACADVL (ENSDNOG00000046949) #28	DLG4 (ENSDNOG00000001199) #29	ASGR1 (ENSDNOG00000008415) #30	ASGR2 (ENSDNOG00000043671) #31	CLEC10A (ENSDNOG00000019467) #32	SLC16A11 (ENSDNOG00000036613) #34	SLC16A13 (ENSDNOG00000043315) #35	BCL6B (ENSDNOG00000035586) #36	C17orf49 (ENSDNOG00000039235)	ENSDNOG00000023883 #37	ALOX12 (ENSDNOG00000015512)
Afrotheria	ANCESTRAL SPECIES	27	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Afrotheria_a	ANCESTRAL SPECIES	27	ENSGT00510000049558 #8	ENSGT00510000049389 #9	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00940000162159 #13	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162310 #31	ENSGT00940000162036 #32	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37
Hyrax	MODERN SPECIES	2308																CLDN7 (ENSPCAG00000015633) #22	ELP5 (ENSPCAG00000015579) #23	CTDNEP1 (ENSPCAG00000015525) #24	GABARAP (ENSPCAG00000015502) #25	PHF23 (ENSPCAG00000015459) #26	ACADVL (ENSPCAG00000015310) #28	DLG4 (ENSPCAG00000015207) #29
Tenrec	MODERN SPECIES	6354																CLDN7 (ENSETEG00000005832) #22	ELP5 (ENSETEG00000005828) #23
Marsupialia	ANCESTRAL SPECIES	22	ENSGT00940000158058	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #8	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721	ENSGT00390000009664 #37	ENSGT00390000016066	ENSGT00940000155191.b	ENSGT00940000162807
Marsupialia_b	ANCESTRAL SPECIES	25	ENSGT00940000158058	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00510000049558 #8	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721.k.a	ENSGT00390000009664 #37	ENSGT00390000016066	ENSGT00940000155191.b	ENSGT00940000162807
Diprotodontia	ANCESTRAL SPECIES	38	ENSGT01050000244976.b.b.b.a.a.a	ENSGT00970000197553	ENSGT00940000170600	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721.k.a	ENSGT00390000009664 #37	ENSGT00390000016066	ENSGT00940000155191.b	ENSGT00940000162807
Diprotodontia_a	ANCESTRAL SPECIES	37	ENSGT00940000158058	ENSGT00970000197553	ENSGT00940000170600	ENSGT00940000160598 #10	ENSGT00390000000334 #11	ENSGT00940000161755 #12	ENSGT00390000018162 #14	ENSGT00940000162799 #15	ENSGT00940000160289 #16	ENSGT00940000163910	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000158535 #28	ENSGT00940000157956 #29	ENSGT00940000161727 #30	ENSGT00940000162017 #34	ENSGT00940000159372 #35	ENSGT00940000159844 #36	ENSGT00390000014721.k.a	ENSGT00390000009664 #37	ENSGT00940000155191.b	ENSGT00940000162807	ENSGT00730000111225
Common wonbat	MODERN SPECIES	746	ENSVURG00010003028	ZBTB4 (ENSVURG00010003009)	CHRNB1 (ENSVURG00010002988)	FGF11 (ENSVURG00010002946)	ENSVURG00010002926	TMEM102 (ENSVURG00010002920)	NLGN2 (ENSVURG00010002903) #10	TMEM256 (ENSVURG00010002894) #11	PLSCR3 (ENSVURG00010002874) #12	TMEM95 (ENSVURG00010002859) #14	KCTD11 (ENSVURG00010002856) #15	ACAP1 (ENSVURG00010002817) #16	ENSVURG00010002791	YBX2 (ENSVURG00010002776) #20	SLC2A4 (ENSVURG00010002768) #21	CLDN7 (ENSVURG00010002741) #22	CTDNEP1 (ENSVURG00010002702) #24	GABARAP (ENSVURG00010002663) #25	PHF23 (ENSVURG00010002654) #26	DVL2 (ENSVURG00010002644) #27	ACADVL (ENSVURG00010002594) #28	DLG4 (ENSVURG00010002536) #29	ASGR1 (ENSVURG00010002494) #30	SLC16A11 (ENSVURG00010002485) #34	SLC16A13 (ENSVURG00010002473) #35	BCL6B (ENSVURG00010002457) #36	C17orf49 (ENSVURG00010002431)	ENSVURG00010002419 #37	ALOX12 (ENSVURG00010002413)	ALOX15 (ENSVURG00010002198)	PELP1 (ENSVURG00010002128)
koala	MODERN SPECIES	167	FGF11 (ENSPCIG00000028847)	ENSPCIG00000028846	ENSPCIG00000034217	NLGN2 (ENSPCIG00000028840) #10	TMEM256 (ENSPCIG00000037010) #11	PLSCR3 (ENSPCIG00000028839) #12	TMEM95 (ENSPCIG00000028837) #14	KCTD11 (ENSPCIG00000033874) #15	ACAP1 (ENSPCIG00000028835) #16	ENSPCIG00000031869	NEURL4 (ENSPCIG00000028823) #17	GPS2 (ENSPCIG00000028822) #18	ENSPCIG00000028821 #19	YBX2 (ENSPCIG00000028819) #20	SLC2A4 (ENSPCIG00000028812) #21	CLDN7 (ENSPCIG00000019579) #22	CTDNEP1 (ENSPCIG00000019577) #24	GABARAP (ENSPCIG00000019575) #25	PHF23 (ENSPCIG00000035547) #26	DVL2 (ENSPCIG00000019572) #27	ACADVL (ENSPCIG00000019571) #28	DLG4 (ENSPCIG00000019570) #29	ASGR1 (ENSPCIG00000019568) #30	SLC16A11 (ENSPCIG00000009637) #34	SLC16A13 (ENSPCIG00000009638) #35	BCL6B (ENSPCIG00000009639) #36	ENSPCIG00000009640	ENSPCIG00000036275 #37	ALOX12 (ENSPCIG00000009641)	ENSPCIG00000033022	ALOX15 (ENSPCIG00000017315)
Tasmanian devil	MODERN SPECIES	3	ZBTB4 (ENSSHAG00000027974)	CHRNB1 (ENSSHAG00000009163)	ENSSHAG00000028446	TMEM102 (ENSSHAG00000004346)	ENSSHAG00000004553 #8	NLGN2 (ENSSHAG00000024935) #10	TMEM256 (ENSSHAG00000030265) #11	PLSCR3 (ENSSHAG00000005753) #12	TMEM95 (ENSSHAG00000028736) #14	KCTD11 (ENSSHAG00000029375) #15	ACAP1 (ENSSHAG00000006376) #16	NEURL4 (ENSSHAG00000006810) #17	ENSSHAG00000007027 #19	YBX2 (ENSSHAG00000007786) #20	ENSSHAG00000007858 #21	CLDN7 (ENSSHAG00000008040) #22	GABARAP (ENSSHAG00000008127) #25	CTDNEP1 (ENSSHAG00000023184) #24	PHF23 (ENSSHAG00000008252) #26	DVL2 (ENSSHAG00000008295) #27	ACADVL (ENSSHAG00000008353) #28	DLG4 (ENSSHAG00000008419) #29	ASGR1 (ENSSHAG00000008647) #30	SLC16A11 (ENSSHAG00000001029) #34	SLC16A13 (ENSSHAG00000000686) #35	BCL6B (ENSSHAG00000000166) #36	ENSSHAG00000000989	ENSSHAG00000000343	ENSSHAG00000000754	ARRB2 (ENSSHAG00000000114)	ENSSHAG00000027155
Opossum	MODERN SPECIES	1	POLR2A (ENSMODG00000007009)	ZBTB4 (ENSMODG00000006962)	CHRNB1 (ENSMODG00000006951)	FGF11 (ENSMODG00000006934)	TMEM102 (ENSMODG00000006926)	ENSMODG00000049809	ENSMODG00000006922 #10	PLSCR3 (ENSMODG00000006876) #12	TMEM95 (ENSMODG00000027509) #14	ACAP1 (ENSMODG00000006852) #16	NEURL4 (ENSMODG00000006733) #17	GPS2 (ENSMODG00000006668) #18	ENSMODG00000006652 #19	ENSMODG00000038830	SLC2A4 (ENSMODG00000006646) #21	CLDN7 (ENSMODG00000006609) #22	CTDNEP1 (ENSMODG00000006588) #24	PHF23 (ENSMODG00000006563) #26	DVL2 (ENSMODG00000006553) #27	ACADVL (ENSMODG00000006498) #28	DLG4 (ENSMODG00000006427) #29	ASGR1 (ENSMODG00000006260) #30	SLC16A11 (ENSMODG00000047654) #34	SLC16A13 (ENSMODG00000006181) #35	BCL6B (ENSMODG00000006161) #36	ENSMODG00000049190	RNASEK (ENSMODG00000038870) #37	ENSMODG00000043842	ENSMODG00000040251	ENSMODG00000050156	ENSMODG00000037675
Platypus	MODERN SPECIES	88	ENSOANG00000036766	ENSOANG00000049743	ENSOANG00000007203	ENSOANG00000040838	ENSOANG00000002509	NLGN2 (ENSOANG00000038162) #10	TMEM256 (ENSOANG00000048373) #11	PLSCR3 (ENSOANG00000044513) #12	TNK1 (ENSOANG00000042604) #13	ENSOANG00000050582 #15	ENSOANG00000049255 #16	GPS2 (ENSOANG00000038447) #18	ENSOANG00000050785 #19	ENSOANG00000050173 #20	SLC2A4 (ENSOANG00000050559) #21	CLDN7 (ENSOANG00000036502) #22	ENSOANG00000031574 #23	CTDNEP1 (ENSOANG00000039629) #24	GABARAP (ENSOANG00000014546) #25	PHF23 (ENSOANG00000045296) #26	DVL2 (ENSOANG00000037917) #27	ACADVL (ENSOANG00000008230) #28	DLG4 (ENSOANG00000040309) #29	ENSOANG00000038430 #30	BCL6B (ENSOANG00000030076) #36	C17orf49 (ENSOANG00000022439)	RNASEK (ENSOANG00000049485) #37	ALOX12 (ENSOANG00000051347)	PELP1 (ENSOANG00000047313)	ENSOANG00000020297	MED11 (ENSOANG00000049055)
Sauria	ANCESTRAL SPECIES	9	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000166623	ENSGT00940000154694	ENSGT00940000163166.b.a.b.a.a	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00960000192626	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000165683	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.b.a.a	ENSGT00940000163166.b.a.b.a.b	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00960000192626	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000165683	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b
Cryptodira	ANCESTRAL SPECIES	16	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.b.b.b	ENSGT00940000163166.b.a.b.a.b	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00960000192626	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000165683	ENSGT00940000155604	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00950000182903.a.b #27	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b
Testudinoidea	ANCESTRAL SPECIES	43	ENSGT01030000234579.A.a	ENSGT00950000183153.c.a	ENSGT00950000183121.a.a.a.a	ENSGT00940000156022.a	ENSGT00940000159844 #36	ENSGT00940000159372.i.a #35	ENSGT00940000159372.i.b.a #35	ENSGT00940000159372.i.b.b #35	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688.h #21	ENSGT00940000160688.g #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24
Emydidae	ANCESTRAL SPECIES	95	ENSGT01030000234579.A.a	ENSGT00950000183153.c.a	ENSGT00950000183121.a.a.a.a	ENSGT00940000156022.a	ENSGT00950000185848	ENSGT00940000159372.i.a #35	ENSGT00940000159372.i.b.a #35	ENSGT00940000159372.i.b.b #35	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688.h #21	ENSGT00940000160688.g #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24
painted turtle	MODERN SPECIES	1126	ENSCPBG00000022157	ATP1B2 (ENSCPBG00000022159)	TP53 (ENSCPBG00000022162)	ENSCPBG00000022166	ENSCPBG00000022169	ENSCPBG00000022174	ENSCPBG00000022178 #35	ENSCPBG00000022181 #35	ENSCPBG00000022184 #35	ACAP1 (ENSCPBG00000022194) #16	NEURL4 (ENSCPBG00000022251) #17	GPS2 (ENSCPBG00000022286) #18	ENSCPBG00000022287 #19	YBX2 (ENSCPBG00000022288) #20	SLC2A4 (ENSCPBG00000022291) #21	CLDN7 (ENSCPBG00000022296) #22	ELP5 (ENSCPBG00000022298) #23	CTDNEP1 (ENSCPBG00000022300) #24	GABARAP (ENSCPBG00000022301) #25	ENSCPBG00000022303 #26	ENSCPBG00000022305 #26	ENSCPBG00000022307 #27	ENSCPBG00000022310 #27	ACADVL (ENSCPBG00000022314) #28
Testudinidae	ANCESTRAL SPECIES	160																ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24
Goode s thornscrub tortoise	MODERN SPECIES	70																CLDN7 (ENSGEVG00005012659) #22	ENSGEVG00005012621 #23	CTDNEP1 (ENSGEVG00005012599) #24
Chinese turtle	MODERN SPECIES	194	ZBTB4 (ENSPSIG00000001270)	SHBG (ENSPSIG00000013826)	ENSPSIG00000013762	ATP1B2 (ENSPSIG00000013357)	TP53 (ENSPSIG00000013302)	ENSPSIG00000013297	BCL6B (ENSPSIG00000013071) #36	SLC16A13 (ENSPSIG00000012961) #35	ENSPSIG00000012957 #16	ENSPSIG00000012951 #16	NEURL4 (ENSPSIG00000012457) #17	GPS2 (ENSPSIG00000012441) #18	ENSPSIG00000012414 #19	YBX2 (ENSPSIG00000012364) #20	SLC2A4 (ENSPSIG00000011968) #21	CLDN7 (ENSPSIG00000011946) #22	ELP5 (ENSPSIG00000011869) #23	CTDNEP1 (ENSPSIG00000011844) #24	PHF23 (ENSPSIG00000011810) #26	DVL2 (ENSPSIG00000011726) #27	ACADVL (ENSPSIG00000011582) #28	ENSPSIG00000001254	DLG4 (ENSPSIG00000011575) #29	ENSPSIG00000011537 #32	KCTD11 (ENSPSIG00000001241) #15	ENSPSIG00000011526	PLSCR3 (ENSPSIG00000011418) #12	NLGN2 (ENSPSIG00000010559) #10	TMEM102 (ENSPSIG00000010488)	FGF11 (ENSPSIG00000010452)	ENSPSIG00000010147
Archosauria	ANCESTRAL SPECIES	10	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.a	ENSGT00940000163166.b.a.b.a.a	ENSGT00940000163166.b.a.b.a.b	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00960000192626	ENSGT00940000155470.b	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000165683	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682
Aves	ANCESTRAL SPECIES	13	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.a	ENSGT00940000163166.b.a.b.a.a.d	ENSGT00940000163166.b.a.b.a.a.c	ENSGT00940000163166.b.a.b.a.b.b	ENSGT00940000163166.b.a.b.a.b.a	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682
Neognathae	ANCESTRAL SPECIES	9	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.b.a.a.d	ENSGT00940000163166.b.a.b.a.a.c	ENSGT00940000163166.b.a.b.a.b.b	ENSGT00940000163166.b.a.b.a.b.a	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.b.a.a.d	ENSGT00940000163166.b.a.b.a.a.c	ENSGT00940000163166.b.a.b.a.b.b	ENSGT00940000163166.b.a.b.a.b.a	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00940000164152	ENSGT00940000157183.b	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000154694	ENSGT00940000163166.b.a.b.a.a.d	ENSGT00940000163166.b.a.b.a.a.c	ENSGT00940000163497	ENSGT00940000159706	ENSGT00940000160400	ENSGT00940000155470.b	ENSGT00510000047568	ENSGT00950000182903.a.a ##27	ENSGT00940000159223	ENSGT00940000155604	ENSGT00940000160672 #22	ENSGT01040000240503.B #24	ENSGT00940000157496 #25	ENSGT00530000063882.b #26	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000161767
Golden eagle	MODERN SPECIES	64		ENSACCG00020012718	LAMTOR4 (ENSACCG00020012729)	TRAPPC14 (ENSACCG00020012752)	GAL3ST4 (ENSACCG00020012773)	ENSACCG00020012802	ENSACCG00020012819	ENSACCG00020012837	AP4M1 (ENSACCG00020012860)	MCM7 (ENSACCG00020012894)	COPS6 (ENSACCG00020012926)	PELP1 (ENSACCG00020012945)	ARRB2 (ENSACCG00020012987)	ENSACCG00020013022	ZMYND15 (ENSACCG00020013038)	CLDN7 (ENSACCG00020013066) #22	CTDNEP1 (ENSACCG00020013091) #24	GABARAP (ENSACCG00020013107) #25	PHF23 (ENSACCG00020013125) #26	ACADVL (ENSACCG00020013197) #28
Lepidosauria	ANCESTRAL SPECIES	184											ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22
tuatara	MODERN SPECIES	1445	ENSSPUG00000018072	ENSSPUG00000018078	DVL2 (ENSSPUG00000018112) #27	PHF23 (ENSSPUG00000018155) #26	GABARAP (ENSSPUG00000018166) #25	CTDNEP1 (ENSSPUG00000018176) #24	ENSSPUG00000018190	NEURL4 (ENSSPUG00000018200) #17	ENSSPUG00000018229	ENSSPUG00000018239	ENSSPUG00000018242 #19	YBX2 (ENSSPUG00000018250) #20	ENSSPUG00000018254 #21	ENSSPUG00000018257 #21	ENSSPUG00000018261 #21	CLDN7 (ENSSPUG00000018265) #22	NLGN2 (ENSSPUG00000018270) #10	FGF11 (ENSSPUG00000018278)	ENSSPUG00000018284	ENSSPUG00000018288	ENSSPUG00000018293	ENSSPUG00000018301	EIF4A1 (ENSSPUG00000018309)	ENSSPUG00000018327	MPDU1 (ENSSPUG00000018334)	ENSSPUG00000018337	ENSSPUG00000018340	ENSSPUG00000018347	ENSSPUG00000018351	GNB2 (ENSSPUG00000018355)
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000004940.a.a	ENSGT00940000164140	ENSGT00390000013904	ENSGT00940000157096	ENSGT00940000171017	ENSGT00950000182903.a.b #27	ENSGT00530000063882.b #26	ENSGT00940000157496 #25	ENSGT01040000240503.B #24	ENSGT00390000009210 #23	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00940000155604
Laterata	ANCESTRAL SPECIES	26	ENSGT00960000191608	ENSGT00940000162799 #15	ENSGT00940000161727.c.a.a #30	ENSGT00940000157956 #29	ENSGT00940000158535 #28	ENSGT00950000182903.a.b.c #27	ENSGT00530000063882.b #26	ENSGT00940000157496 #25	ENSGT01040000240503.B #24	ENSGT00390000009210 #23	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00390000003738.a.a.b #19	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00940000160289 #16	ENSGT00940000162017 #34	ENSGT00940000159372.i.b.b #35	ENSGT00940000159372.i.b.a #35	ENSGT00940000159372.i.a #35	ENSGT00940000159844 #36	ENSGT00950000185848	ENSGT00940000156022.a	ENSGT00950000183121.a.a.a.a	ENSGT00950000183153.c.a	ENSGT01030000234579.A.a	ENSGT00940000165258	ENSGT00940000154035.a	ENSGT00940000161268	ENSGT00940000153249.b.c
Argentine black and white tegu	MODERN SPECIES	38	KCTD11 (ENSSMRG00000003072) #15	ENSSMRG00000003075	ENSSMRG00000003081 #30	DLG4 (ENSSMRG00000003093) #29	ACADVL (ENSSMRG00000003140) #28	DVL2 (ENSSMRG00000003154) #27	PHF23 (ENSSMRG00000003160) #26	GABARAP (ENSSMRG00000003164) #25	CTDNEP1 (ENSSMRG00000003176) #24	ENSSMRG00000003177 #23	NEURL4 (ENSSMRG00000003181) #17	GPS2 (ENSSMRG00000003191) #18	ENSSMRG00000003202 #19	YBX2 (ENSSMRG00000003205) #20	SLC2A4 (ENSSMRG00000003207) #21	CLDN7 (ENSSMRG00000003210) #22	ACAP1 (ENSSMRG00000003212) #16	ENSSMRG00000003216 #35	ENSSMRG00000003217 #35	ENSSMRG00000003218 #35	ENSSMRG00000003220	ENSSMRG00000003223	ENSSMRG00000003226	TP53 (ENSSMRG00000003228)	ATP1B2 (ENSSMRG00000003235)	ENSSMRG00000003236	ENSSMRG00000003239	ZBTB4 (ENSSMRG00000003240)	ENSSMRG00000003241	POLR2A (ENSSMRG00000003243)	TNFSF12 (ENSSMRG00000003244)
Common wall lizard	MODERN SPECIES	4	ENSPMRG00000011978	KCTD11 (ENSPMRG00000011974) #15	ENSPMRG00000011968 #30	DLG4 (ENSPMRG00000011916) #29	ENSPMRG00000011901 #28	ENSPMRG00000011895 #27	PHF23 (ENSPMRG00000011891) #26	GABARAP (ENSPMRG00000011885) #25	CTDNEP1 (ENSPMRG00000011878) #24	ENSPMRG00000011875 #23	NEURL4 (ENSPMRG00000011857) #17	GPS2 (ENSPMRG00000011843) #18	ENSPMRG00000011836 #19	YBX2 (ENSPMRG00000011832) #20	SLC2A4 (ENSPMRG00000011830) #21	CLDN7 (ENSPMRG00000011827) #22	ACAP1 (ENSPMRG00000011823) #16	SLC16A11 (ENSPMRG00000011818) #34	ENSPMRG00000011816 #35	ENSPMRG00000011811 #35	ENSPMRG00000011807	ENSPMRG00000011803 #35	BCL6B (ENSPMRG00000011791) #36	ENSPMRG00000011787	ENSPMRG00000011783	ENSPMRG00000011777	ENSPMRG00000011772	ENSPMRG00000011770	ENSPMRG00000011764	TP53 (ENSPMRG00000011759)	ATP1B2 (ENSPMRG00000011752)
Toxicofera	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Lizard	MODERN SPECIES	2160																ENSACAG00000038110 #22
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Acanthophiinae	DUPLICATION
Acanthophiinae	ANCESTRAL SPECIES	270																ENSGT00940000160672.e #22	ENSGT00940000154717.xb.b
Mainland tiger snake	MODERN SPECIES	585																ENSNSUG00000001416 #22	ENSNSUG00000001404
Eastern brown snake	MODERN SPECIES	328																ENSPTXG00000014849 #22	ENSPTXG00000014848
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000160672.f #22
Eastern brown snake	MODERN SPECIES	321																ENSPTXG00000013091 #22	ENSPTXG00000013093 #30	ENSPTXG00000013097	ENSPTXG00000013100	ENSPTXG00000013102	TMEM102 (ENSPTXG00000013106)
Blue-lipped sea krait	MODERN SPECIES	4129																ENSLLTG00000008189 #22
Anura	ANCESTRAL SPECIES	276										ENSGT00940000159372 #35	ENSGT00940000160289 #16	ENSGT00940000159866 #17	ENSGT00390000004049 #18	ENSGT00940000159816 #20	ENSGT00940000160688 #21	ENSGT00940000160672 #22	ENSGT00390000009210 #23	ENSGT01040000240503.B #24
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000001139	ENSLLEG00000001129	ENSLLEG00000000942	ZMYND15 (ENSLLEG00000000736)	ENSLLEG00000000672	ENSLLEG00000000604	ENSLLEG00000000563	ENSLLEG00000010024	CAMTA2 (ENSLLEG00000009666)	SPAG7 (ENSLLEG00000009497)	ENO3 (ENSLLEG00000009166)	NEURL4 (ENSLLEG00000008936) #17	ENSLLEG00000008709 #16	ENSLLEG00000008678	SLC16A13 (ENSLLEG00000008586) #35	CLDN7 (ENSLLEG00000008533) #22	ENSLLEG00000008509	GABARAP (ENSLLEG00000008445) #25	POLR2A (ENSLLEG00000008237)
Frog	MODERN SPECIES	3	ENSXETG00000041869	lcmt2 (ENSXETG00000012450)	ENSXETG00000012465	SHBG (ENSXETG00000043264)	atp1b2 (ENSXETG00000025056)	tp53 (ENSXETG00000025055)	ENSXETG00000046585	slc16a13 (ENSXETG00000046558) #35	acap1 (ENSXETG00000017847) #16	neurl4 (ENSXETG00000017842) #17	GPS2 (ENSXETG00000027787) #18	ybx2 (ENSXETG00000041917) #20	ENSXETG00000044000	ENSXETG00000045980	slc2a4 (ENSXETG00000045346) #21	cldn7 (ENSXETG00000049181) #22	elp5 (ENSXETG00000041810) #23	ctdnep1 (ENSXETG00000043462) #24	phf23 (ENSXETG00000049315) #26	dvl2 (ENSXETG00000046940) #27	ENSXETG00000042676	ENSXETG00000044730	ENSXETG00000035305	ENSXETG00000041571	XB5946328 [provisional:or11l1] (ENSXETG00000041979)	ENSXETG00000048316	or1s1 (ENSXETG00000045394)	ENSXETG00000047633	ENSXETG00000046951	ENSXETG00000048992	ENSXETG00000047242
Coelacanth	MODERN SPECIES	2177																CLDN7 (ENSLACG00000008566) #22	ENSLACG00000008294 #23	ENSLACG00000022381	acap1 (ENSLACG00000006752) #16	ENSLACG00000006452 #35	ENSLACG00000006126	plod3 (ENSLACG00000005187)	MPDU1 (ENSLACG00000004545)	ENSLACG00000004080	eif4a1a (ENSLACG00000003242)	ENSLACG00000003095	ENSLACG00000002554	ENSLACG00000001864
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000160672 #22
Osteoglossocephalai	ANCESTRAL SPECIES	439														ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b
Clupeocephala	ANCESTRAL SPECIES	32	ENSGT00950000182887.C.a.a.a.a.b	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000158370	ENSGT00940000159217	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.c.b	ENSGT00940000158761.b	ENSGT00990000204690	ENSGT00940000155521.a.b	ENSGT01050000244823.d.a.a.b	ENSGT00940000156324.f.b
Otomorpha	ANCESTRAL SPECIES	70	ENSGT00390000009664.b #37	ENSGT00950000182887.C.a.a.a.a.b	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159217	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.d	ENSGT00940000158761.b	ENSGT00990000204690	ENSGT00940000166432.c.b.b.a	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000159553.a	ENSGT00940000155898.q
Otophysi	ANCESTRAL SPECIES	18	ENSGT00390000010184	ENSGT00730000113701	ENSGT00950000182887.C.a.a.a.a.b	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541.b	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.c.b	ENSGT00940000158761.b	ENSGT00990000204690	ENSGT00940000178703	ENSGT00940000166432.d.g	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b
Characiphysae	ANCESTRAL SPECIES	42	ENSGT00530000063691.b	ENSGT00990000203589.a.b.a.b.sb	ENSGT00940000161558.a	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541.b	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.d	ENSGT00940000158761.b	ENSGT00990000204690	ENSGT00940000164173.b.a.c.b	ENSGT00940000164173.a.b	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000159553.a
Channel catfish	MODERN SPECIES	7	ENSIPUG00000018979	hmgb1a (ENSIPUG00000018990)	ENSIPUG00000019000	lhfpl6 (ENSIPUG00000019025)	foxo1b (ENSIPUG00000019054)	AP4M1 (ENSIPUG00000019060)	and3 (ENSIPUG00000019118)	vamp2 (ENSIPUG00000019130)	pcolcea (ENSIPUG00000019138)	tmem88a (ENSIPUG00000019150)	kdm6bb (ENSIPUG00000019157)	EFNB3 (ENSIPUG00000019274)	GIGYF1 (ENSIPUG00000019293)	nlgn2b (ENSIPUG00000019333)	ENSIPUG00000019379	cldn7b (ENSIPUG00000019390) #22	ponzr2 (ENSIPUG00000019403)	ENSIPUG00000019418	tlx3b (ENSIPUG00000019432)	npm1 (ENSIPUG00000019452)	kcnip1b (ENSIPUG00000019503)	ENSIPUG00000019562	ENSIPUG00000019762	HRH2 (ENSIPUG00000019788)	ENSIPUG00000019799	ENSIPUG00000019821	ENSIPUG00000019907	pcdh1gc5 (ENSIPUG00000019913)	ENSIPUG00000019937	ENSIPUG00000019943	ENSIPUG00000019960
Characiphysae_b	ANCESTRAL SPECIES	79	ENSGT00530000063691.b	ENSGT00990000203589.a.b.a.b.sb	ENSGT00940000161558.a	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541.b	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000175544	ENSGT00940000165390.b.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000163777.a.j.b	ENSGT00940000164983.c.a.a.a	ENSGT00940000164983.d.b	ENSGT00940000164468.a.b.a.b.e
Electric eel	MODERN SPECIES	667															ENSEEEG00000001359	cldn7b (ENSEEEG00000001364) #22	ponzr2 (ENSEEEG00000001368)	ENSEEEG00000001369	tlx3b (ENSEEEG00000001370)	npm1a (ENSEEEG00000001373)	kcnip1b (ENSEEEG00000001376)	ENSEEEG00000001377	ENSEEEG00000001378	hrh2b (ENSEEEG00000001379)	pcdh1g32 (ENSEEEG00000001383)	ENSEEEG00000001399	ENSEEEG00000001401	ENSEEEG00000001402
Characoidei	ANCESTRAL SPECIES	40	ENSGT00530000063691.b	ENSGT00990000203589.a.b.a.b.sb	ENSGT00940000161558.a	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541.b	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000175544	ENSGT00940000165390.b.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000164983.c.a.a.b.b	ENSGT00940000164468.a.a.b.b.f.b.a	ENSGT00940000178703	ENSGT00940000166432.d.g.b.a
Mexicana tetra	MODERN SPECIES	12	med13a (ENSAMXG00000000955)	ENSAMXG00000033893	ENSAMXG00000043765	uqcc3 (ENSAMXG00000032388)	cnih2 (ENSAMXG00000030753)	wdr74 (ENSAMXG00000018135)	ehd1b (ENSAMXG00000031892)	cxadr (ENSAMXG00000013194)	ENSAMXG00000037150	ENSAMXG00000041670	ENSAMXG00000039541	ENSAMXG00000031254	nlgn2b (ENSAMXG00000010270)	ENSAMXG00000010260	ENSAMXG00000029655	cldn7b (ENSAMXG00000043439) #22	ENSAMXG00000032409	ENSAMXG00000041907	ENSAMXG00000043923	ponzr2 (ENSAMXG00000038603)	ENSAMXG00000043487	ENSAMXG00000034892	tlx3b (ENSAMXG00000043493)	npm1a (ENSAMXG00000010155)	kcnip1b (ENSAMXG00000033269)	ENSAMXG00000010127	ENSAMXG00000034384	ENSAMXG00000031328	ENSAMXG00000033777	ENSAMXG00000040407	ENSAMXG00000010091
Red-bellied piranha	MODERN SPECIES	659																cldn7b (ENSPNAG00000027073) #22	ENSPNAG00000026957	ponzr2 (ENSPNAG00000004150)	ENSPNAG00000004970	ugt5g2 (ENSPNAG00000026927)	tlx3b (ENSPNAG00000026910)	npm1a (ENSPNAG00000026891)	kcnip1b (ENSPNAG00000026866)	ENSPNAG00000026804	ENSPNAG00000004111	ENSPNAG00000006145	ENSPNAG00000026750	ENSPNAG00000005029	HRH2 (ENSPNAG00000026629)	ENSPNAG00000007141	ENSPNAG00000026601
Cyprinoidei	ANCESTRAL SPECIES	6	ENSGT00950000182887.C.a.a.a.a.b	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159217	ENSGT00940000159264.e	ENSGT00940000176904.b	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541.b	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.d.g.b	ENSGT00940000165390.b.d.h	ENSGT00940000167565	ENSGT00940000166432.c.b.b.a.b.b.b	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000159553.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	778															ENSGT00940000158058.b.k.a	ENSGT00940000160672.a #22	ENSGT00940000163701.b.a.b.d.a	ENSGT00940000163701.b.a.b.d.b	ENSGT00940000163701.b.a.a.a.b.e.a	ENSGT00940000166282.B.b	ENSGT00940000160629.a.d	ENSGT00940000166176.b	ENSGT00940000158048.d.c	ENSGT00940000165390.b.d.h
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1	rassf2b (ENSCARG00000014656)	kcnip3b (ENSCARG00000014591)	PCDH1 (ENSCARG00000014587)	avd (ENSCARG00000014581)	trpc7a (ENSCARG00000014465)	etf1b (ENSCARG00000014436)	fbxw11b (ENSCARG00000013466)	fgf18b (ENSCARG00000013420)	ENSCARG00000013412	ENSCARG00000013404	ENSCARG00000013401	ENSCARG00000013396	ENSCARG00000013392	ENSCARG00000013390	ENSCARG00000013387	cldn7b (ENSCARG00000013380) #22	ponzr2 (ENSCARG00000013377)	ponzr2 (ENSCARG00000013370)	ENSCARG00000013373	tlx3b (ENSCARG00000013368)	npm1a (ENSCARG00000013362)	kcnip1b (ENSCARG00000013351)	ENSCARG00000013345	ENSCARG00000013284	ENSCARG00000013262	golga7 (ENSCARG00000013252)	loxl2a (ENSCARG00000012846)	ENSCARG00000012806	ENSCARG00000012803	ENSCARG00000012801	ENSCARG00000012797
Goldfish	MODERN SPECIES	441																cldn7b (ENSCARG00000051490) #22
Cyprininae_a	ANCESTRAL SPECIES	293	ENSGT00940000159929.k	ENSGT00390000005067.b.a	ENSGT00940000164382.a.b	ENSGT00940000159217.d.a	ENSGT00940000159264.e.b	ENSGT00940000163776.a.b.d	ENSGT00940000160414.d.c	ENSGT00940000160323.a.b.b	ENSGT00940000159845.a.b.a	ENSGT01030000234592.A.b.b.a.b.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b.c.a	ENSGT00390000017226.k.b	ENSGT00940000166430.d	ENSGT00940000158058.b.k.b	ENSGT00940000160672.b.b #22	ENSGT00940000160672.a #22	ENSGT00940000163701.b.a.b.c	ENSGT00940000163701.b.a.a.a.b.f.a	ENSGT00940000163701.b.a.a.a.b.e.b	ENSGT00940000166282.B.a	ENSGT00940000160629.a.c	ENSGT00940000166176.a	ENSGT00940000158048.d.d	ENSGT00940000165390.b.c.b	ENSGT00940000165390.b.d.g.b.a.a.b	ENSGT00940000167565.a
Common carp reference	MODERN SPECIES	32	arrb2a (ENSCCRG00000013975)	ap4m1 (ENSCCRG00000029097)	and3 (ENSCCRG00000082346)	vamp2 (ENSCCRG00000052870)	per1a (ENSCCRG00000042463)	pcolcea (ENSCCRG00000042449)	tmem88a (ENSCCRG00000064126)	kdm6bb (ENSCCRG00000058827)	ENSCCRG00000071610	ENSCCRG00000067150	zgc:172339 (ENSCCRG00000042141)	ENSCCRG00000019473	epob (ENSCCRG00000019487)	nlgn2b (ENSCCRG00000020748)	ENSCCRG00000069985	cldn7b (ENSCCRG00000058719) #22	ponzr2 (ENSCCRG00000073185)	ENSCCRG00000067679	ENSCCRG00000078589	tlx3b (ENSCCRG00000024597)	ENSCCRG00000076971	npm1a (ENSCCRG00000068898)	kcnip1b (ENSCCRG00000073511)	ENSCCRG00000082198	ENSCCRG00000024545	ENSCCRG00000044543	hrh2b (ENSCCRG00000044553)	ENSCCRG00000044558	pcdh1g31 (ENSCCRG00000055289)	ENSCCRG00000080636	ENSCCRG00000003523
Cyprininae	ANCESTRAL SPECIES	333	ENSGT00950000182887.C.a.a.a.a.b.b	ENSGT00940000159929.k	ENSGT00390000005067.b.a	ENSGT00940000164382.a.b	ENSGT00940000159217.d.a	ENSGT00940000159264.e.b	ENSGT00940000163776.a.b.d	ENSGT00940000160414.d.c	ENSGT00940000160323.a.b.b	ENSGT00940000159845.a.b.a	ENSGT01030000234592.A.b.b.a.b.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b.c.a	ENSGT00390000017226.k.b	ENSGT00940000166430.d	ENSGT00940000158058.b.k.b	ENSGT00940000160672.b #22	ENSGT00940000163701.b.a.b.c	ENSGT00940000163701.b.a.a.a.b.f	ENSGT00940000163701.b.a.a.a.b.e.b	ENSGT00940000166282.B.a	ENSGT00940000160629.a.c	ENSGT00940000166176.a	ENSGT00940000158048.d.d	ENSGT00940000165390.b.d.g.b.a.a.b	ENSGT00940000167565.a
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	231	ENSGT00390000005067.b.b	ENSGT00940000164382.a.a	ENSGT00940000159217.d.b	ENSGT00940000159264.e.a	ENSGT00940000176904.b	ENSGT00940000163776.a.b.c	ENSGT00940000160414.d.d	ENSGT00940000160323.a.b.a	ENSGT00940000159845.a.b.b	ENSGT01030000234592.A.b.b.a.b.b.b.a	ENSGT01030000234592.A.b.b.a.b.a.b.c.b	ENSGT00390000017226.k.a	ENSGT00940000166430.c	ENSGT00940000158058.b.l	ENSGT00940000158058.b.k.a	ENSGT00940000160672.b.a #22	ENSGT00940000174541.b	ENSGT00940000163701.b.a.b.d.a	ENSGT00940000163701.b.a.b.d.b	ENSGT00940000163701.b.a.a.a.b.f.b	ENSGT00940000163701.b.a.a.a.b.e.a	ENSGT00940000166282.B.b	ENSGT00940000160629.a.d	ENSGT00940000166176.b	ENSGT00940000158048.d.c	ENSGT00940000165390.b.d.g.b.a.a.a.a	ENSGT00940000165390.b.d.g.b.b	ENSGT00940000167565.b	ENSGT00940000164983.c.a.a.a.a.a.a	ENSGT00940000164983.c.a.a.b.b	ENSGT00940000164468.a.b.b.b.a
Golden-line barbel	MODERN SPECIES	439															ENSSGRG00000055335	cldn7b (ENSSGRG00000055336) #22	ponzr2 (ENSSGRG00000055338)	ENSSGRG00000055339	ENSSGRG00000055344	ugt5g2 (ENSSGRG00000055345)	tlx3b (ENSSGRG00000055346)	npm1a (ENSSGRG00000055347)	kcnip1b (ENSSGRG00000055348)	ENSSGRG00000055350	ENSSGRG00000055352	ENSSGRG00000055353	ENSSGRG00000055354	ENSSGRG00000055355	hrh2b (ENSSGRG00000055356)	pcdh1gc5 (ENSSGRG00000055359)	ENSSGRG00000055360
Common carp reference	MODERN SPECIES	24	si:ch1073-143l10.2 (ENSCCRG00000014063)	ap4m1 (ENSCCRG00000015640)	vamp2 (ENSCCRG00000060905)	per1a (ENSCCRG00000042808)	pcolcea (ENSCCRG00000040830)	ENSCCRG00000077258	tmem88a (ENSCCRG00000040856)	kdm6bb (ENSCCRG00000040864)	ENSCCRG00000058557	ENSCCRG00000019477	zgc:172339 (ENSCCRG00000082842)	ENSCCRG00000053626	epob (ENSCCRG00000056696)	nlgn2b (ENSCCRG00000064856)	ENSCCRG00000075872	cldn7b (ENSCCRG00000049811) #22	ENSCCRG00000078150	ponzr2 (ENSCCRG00000068605)	ponzr2 (ENSCCRG00000049807)	ENSCCRG00000026564	ENSCCRG00000026513	ugt5g2 (ENSCCRG00000026507)	tlx3b (ENSCCRG00000049801)	npm1a (ENSCCRG00000068283)	kcnip1b (ENSCCRG00000075219)	ENSCCRG00000061744	ENSCCRG00000050194	hrh2b (ENSCCRG00000038098)	ENSCCRG00000038102	cbln17 (ENSCCRG00000080170)	ENSCCRG00000058111
Cyprininae_a	ANCESTRAL SPECIES	293	ENSGT00950000182887.C.a.a.a.a.b.b	ENSGT00940000159929.k	ENSGT00390000005067.b.a	ENSGT00940000164382.a.b	ENSGT00940000159217.d.a	ENSGT00940000159264.e.b	ENSGT00940000163776.a.b.d	ENSGT00940000160414.d.c	ENSGT00940000160323.a.b.b	ENSGT00940000159845.a.b.a	ENSGT01030000234592.A.b.b.a.b.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b.c.a	ENSGT00390000017226.k.b	ENSGT00940000166430.d	ENSGT00940000158058.b.k.b	ENSGT00940000160672.b.b #22	ENSGT00940000160672.a #22	ENSGT00940000163701.b.a.b.c	ENSGT00940000163701.b.a.a.a.b.f.a	ENSGT00940000163701.b.a.a.a.b.e.b	ENSGT00940000166282.B.a	ENSGT00940000160629.a.c	ENSGT00940000166176.a	ENSGT00940000158048.d.d	ENSGT00940000165390.b.c.b	ENSGT00940000165390.b.d.g.b.a.a.b	ENSGT00940000167565.a
Golden-line barbel	MODERN SPECIES	77	arrb2a (ENSSGRG00000048227)	ap4m1 (ENSSGRG00000048151)	and3 (ENSSGRG00000048147)	vamp2 (ENSSGRG00000048142)	per1a (ENSSGRG00000048014)	pcolcea (ENSSGRG00000048012)	tmem88a (ENSSGRG00000048010)	kdm6bb (ENSSGRG00000048008)	ENSSGRG00000048007	GIGYF1 (ENSSGRG00000048003)	zgc:172339 (ENSSGRG00000048001)	ENSSGRG00000048000	epob (ENSSGRG00000047999)	nlgn2b (ENSSGRG00000047711)	ENSSGRG00000047705	cldn7b (ENSSGRG00000047702) #22	ENSSGRG00000047690	ENSSGRG00000047684	ugt5g2 (ENSSGRG00000047682)	tlx3b (ENSSGRG00000047680)	npm1a (ENSSGRG00000047679)	kcnip1b (ENSSGRG00000047669)	ENSSGRG00000047668	ENSSGRG00000047661	ENSSGRG00000047659	ENSSGRG00000047646	hrh2b (ENSSGRG00000047645)	ENSSGRG00000047644	cbln17 (ENSSGRG00000047643)	ENSSGRG00000047642	ENSSGRG00000047641
Goldfish	MODERN SPECIES	28	med11 (ENSCARG00000005895)	arrb2a (ENSCARG00000043060)	ap4m1 (ENSCARG00000043002)	and3 (ENSCARG00000042982)	vamp2 (ENSCARG00000042965)	per1a (ENSCARG00000042052)	pcolcea (ENSCARG00000041907)	tmem88a (ENSCARG00000041885)	kdm6bb (ENSCARG00000041723)	ENSCARG00000041698	GIGYF1 (ENSCARG00000041644)	zgc:172339 (ENSCARG00000041632)	ENSCARG00000041626	nlgn2b (ENSCARG00000040995)	ENSCARG00000040916	cldn7b (ENSCARG00000040904) #22	ponzr2 (ENSCARG00000040893)	ENSCARG00000040881	ENSCARG00000040842	ugt5g2 (ENSCARG00000040831)	tlx3b (ENSCARG00000040816)	npm1a (ENSCARG00000040800)	kcnip1b (ENSCARG00000040653)	ENSCARG00000040442	hrh2b (ENSCARG00000040399)	ENSCARG00000040388	vldlr (ENSCARG00000025678)	KCNV2 (ENSCARG00000025308)	pum3 (ENSCARG00000024944)	trappc13 (ENSCARG00000024749)	sgtb (ENSCARG00000024701)
Zebrafish	MODERN SPECIES	1	ap4m1 (ENSDARG00000056871)	and3 (ENSDARG00000056873)	vamp2 (ENSDARG00000056877)	per1a (ENSDARG00000056885)	pcolcea (ENSDARG00000056913)	si:ch211-237l4.6 (ENSDARG00000056915)	tmem88a (ENSDARG00000056920)	kdm6bb (ENSDARG00000056929)	ENSDARG00000112993	GIGYF1 (ENSDARG00000078691)	zgc:172339 (ENSDARG00000069190)	ENSDARG00000117144	epob (ENSDARG00000100737)	nlgn2b (ENSDARG00000079251)	ENSDARG00000043907	cldn7b (ENSDARG00000014047) #22	ENSDARG00000097477	ponzr2 (ENSDARG00000088539)	ENSDARG00000008182	ENSDARG00000109946	ENSDARG00000087764	ugt5g2 (ENSDARG00000043901)	tlx3b (ENSDARG00000017615)	npm1a (ENSDARG00000014329)	kcnip1b (ENSDARG00000034808)	ENSDARG00000107280	ENSDARG00000112454	hrh2b (ENSDARG00000057479)	cbln17 (ENSDARG00000088911)	ENSDARG00000112040	pcdh1g32 (ENSDARG00000100829)
Clupeiformes	ANCESTRAL SPECIES	165	ENSGT00390000009664.b #37	ENSGT00950000182887.C.a.a.a.a.b	ENSGT00940000159929	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159217	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000163701.b.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.d	ENSGT00940000158761.b	ENSGT00990000204690	ENSGT00940000163777.a	ENSGT00940000164983.c.a.a.b.a.b	ENSGT00940000164468.a.b.b.b
Denticle herring	MODERN SPECIES	16	ENSDCDG00000001460	zgc:103508 (ENSDCDG00000001464)	rnasekb (ENSDCDG00000001466) #37	arrb2a (ENSDCDG00000001526)	ap4m1 (ENSDCDG00000001744)	and3 (ENSDCDG00000001764)	vamp2 (ENSDCDG00000001770)	pcolcea (ENSDCDG00000001773)	tmem88a (ENSDCDG00000001778)	kdm6bb (ENSDCDG00000001779)	EFNB3 (ENSDCDG00000001783)	GIGYF1 (ENSDCDG00000001794)	ENSDCDG00000001804	nlgn2b (ENSDCDG00000001808)	FGF11 (ENSDCDG00000001836)	cldn7b (ENSDCDG00000001842) #22	ponzr2 (ENSDCDG00000001848)	ugt5g2 (ENSDCDG00000001854)	tlx3b (ENSDCDG00000001860)	npm1a (ENSDCDG00000001867)	kcnip1b (ENSDCDG00000001875)	npm1a (ENSDCDG00000001887)	kcnip1b (ENSDCDG00000001900)	kcnip1b (ENSDCDG00000001912)	npm1a (ENSDCDG00000001915)	npm1a (ENSDCDG00000001918)	ENSDCDG00000001920	HRH2 (ENSDCDG00000001925)	ENSDCDG00000001931	CLINT1 (ENSDCDG00000001938)	EBF1 (ENSDCDG00000001962)
Euteleosteomorpha	ANCESTRAL SPECIES	134	ENSGT01060000248589.C.h	ENSGT00940000158744	ENSGT00510000047092	ENSGT00530000063582.a	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166258	ENSGT00940000174541	ENSGT00940000163701.a	ENSGT00940000163701.b.b	ENSGT00940000163701.b.a.a.a.a	ENSGT00940000166282.C	ENSGT00940000166282.A	ENSGT00950000183136.b.a.b	ENSGT00940000162009.a	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d
Acanthomorphata	ANCESTRAL SPECIES	53	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b
Percomorphaceae	ANCESTRAL SPECIES	9	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b	ENSGT00940000164085.d.a.c	ENSGT00940000156995.b
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b	ENSGT00940000164085.d.a.c	ENSGT00940000156995.b
Yellowtail amberjack	MODERN SPECIES	2973	kif4 (ENSSLDG00000018355)	ammecr1 (ENSSLDG00000018329)	TMEM164 (ENSSLDG00000018272)	GABRA3 (ENSSLDG00000018231)	ENSSLDG00000018156	ENSSLDG00000018110	TMLHE (ENSSLDG00000018087)	mpp1 (ENSSLDG00000018059)	vamp2 (ENSSLDG00000018051)	pcolcea (ENSSLDG00000018038)	tmem88a (ENSSLDG00000018025)	kdm6bb (ENSSLDG00000017966)	ENSSLDG00000017950	nlgn2b (ENSSLDG00000017919)	ENSSLDG00000017891	cldn7b (ENSSLDG00000017874) #22	npm1a (ENSSLDG00000017849)	kcnip1b (ENSSLDG00000017813)	HRH2 (ENSSLDG00000017793)	PCDHAC2 (ENSSLDG00000017781)	ENSSLDG00000017772	ENSSLDG00000017759	PCDH1 (ENSSLDG00000017748)	ENSSLDG00000017699	ROBO1 (ENSSLDG00000017612)	ppm1db (ENSSLDG00000017589)	tbx2a (ENSSLDG00000017580)	ENSSLDG00000017565	acaca (ENSSLDG00000017462)	lhx1b (ENSSLDG00000017427)	SEZ6 (ENSSLDG00000017402)
Greater amberjack	MODERN SPECIES	39	ammecr1 (ENSSDUG00000015888)	TMEM164 (ENSSDUG00000015862)	GABRA3 (ENSSDUG00000015839)	ENSSDUG00000015818	ENSSDUG00000015790	TMLHE (ENSSDUG00000015774)	mpp1 (ENSSDUG00000015726)	vamp2 (ENSSDUG00000015716)	ENSSDUG00000015706	pcolcea (ENSSDUG00000015694)	tmem88a (ENSSDUG00000015683)	kdm6bb (ENSSDUG00000015668)	ENSSDUG00000015656	nlgn2b (ENSSDUG00000015644)	FGF11 (ENSSDUG00000015630)	cldn7b (ENSSDUG00000015623) #22	npm1a (ENSSDUG00000015609)	kcnip1b (ENSSDUG00000015591)	HRH2 (ENSSDUG00000015582)	PCDHAC2 (ENSSDUG00000015572)	ENSSDUG00000015563	ENSSDUG00000015390	PCDH1 (ENSSDUG00000015358)	ENSSDUG00000015333	ENSSDUG00000015322	ENSSDUG00000015309	ppm1db (ENSSDUG00000015198)	tbx2a (ENSSDUG00000015169)	acaca (ENSSDUG00000015072)	lhx1b (ENSSDUG00000015049)	SEZ6 (ENSSDUG00000014823)
Barramundi perch	MODERN SPECIES	94	kif4 (ENSLCAG00010020813)	ammecr1 (ENSLCAG00010020875)	TMEM164 (ENSLCAG00010020879)	GABRA3 (ENSLCAG00010020885)	ENSLCAG00010020897	ENSLCAG00010020906	TMLHE (ENSLCAG00010020912)	mpp1 (ENSLCAG00010020925)	vamp2 (ENSLCAG00010020964)	pcolcea (ENSLCAG00010020976)	tmem88a (ENSLCAG00010020982)	kdm6bb (ENSLCAG00010020985)	ENSLCAG00010020993	nlgn2b (ENSLCAG00010021003)	ENSLCAG00010021033	cldn7b (ENSLCAG00010021036) #22	npm1a (ENSLCAG00010021047)	kcnip1b (ENSLCAG00010021065)	HRH2 (ENSLCAG00010021072)	PCDHAC2 (ENSLCAG00010021073)	ENSLCAG00010021076	ENSLCAG00010021077	PCDH1 (ENSLCAG00010021078)	ROBO2 (ENSLCAG00010021147)	ENSLCAG00010021369	ppm1db (ENSLCAG00010021470)	tbx2a (ENSLCAG00010021471)	acaca (ENSLCAG00010021522)	lhx1b (ENSLCAG00010021635)	SEZ6 (ENSLCAG00010021648)	ENSLCAG00010021758
Pleuronectoidei	ANCESTRAL SPECIES	27	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Tongue sole	MODERN SPECIES	10	adssl (ENSCSEG00000010887)	kif4 (ENSCSEG00000010912)	ammecr1 (ENSCSEG00000010951)	TMEM164 (ENSCSEG00000010961)	GABRA3 (ENSCSEG00000010971)	ENSCSEG00000010984	TMLHE (ENSCSEG00000011005)	mpp1 (ENSCSEG00000011026)	vamp2 (ENSCSEG00000011053)	pcolcea (ENSCSEG00000011063)	tmem88a (ENSCSEG00000011069)	ENSCSEG00000011072	kdm6bb (ENSCSEG00000011085)	nlgn2b (ENSCSEG00000011119)	ENSCSEG00000011150	cldn7b (ENSCSEG00000011159) #22	npm1a (ENSCSEG00000011165)	HRH2 (ENSCSEG00000011190)	PCDHAC2 (ENSCSEG00000011194)	ENSCSEG00000011200	ENSCSEG00000011203	ENSCSEG00000011211	PCDH1 (ENSCSEG00000011244)	ROBO2 (ENSCSEG00000011288)	ROBO1 (ENSCSEG00000011320)	ppm1db (ENSCSEG00000011407)	ENSCSEG00000011423	acaca (ENSCSEG00000011442)	lhx1b (ENSCSEG00000011601)	ENSCSEG00000011612	ENSCSEG00000011645
Turbot	MODERN SPECIES	16	ENSSMAG00000019453	ENSSMAG00000019415	ENSSMAG00000019406	ENSSMAG00000019393	ENSSMAG00000019358	ENSSMAG00000019342	ENSSMAG00000019328	ENSSMAG00000019304	vamp2 (ENSSMAG00000033547)	pcolcea (ENSSMAG00000019284)	tmem88a (ENSSMAG00000019282)	kdm6bb (ENSSMAG00000019216)	ENSSMAG00000019203	nlgn2b (ENSSMAG00000019144)	ENSSMAG00000019125	cldn7b (ENSSMAG00000019124) #22	ENSSMAG00000019090	ENSSMAG00000019010	ENSSMAG00000019007	ENSSMAG00000018999	ENSSMAG00000018993	ENSSMAG00000018984	ENSSMAG00000018975	ENSSMAG00000018935	ENSSMAG00000018887	ENSSMAG00000018817	ppm1db (ENSSMAG00000018804)	tbx2a (ENSSMAG00000018798)	acaca (ENSSMAG00000018733)	lhx1b (ENSSMAG00000018705)	ENSSMAG00000018687
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Siamese fighting fish	MODERN SPECIES	5	adssl (ENSBSLG00000011141)	kif4 (ENSBSLG00000010982)	ammecr1 (ENSBSLG00000010959)	TMEM164 (ENSBSLG00000010939)	ENSBSLG00000010723	ENSBSLG00000026103	ENSBSLG00000026066	TMLHE (ENSBSLG00000026062)	vamp2 (ENSBSLG00000026060)	pcolcea (ENSBSLG00000026054)	tmem88a (ENSBSLG00000026044)	kdm6bb (ENSBSLG00000026034)	ENSBSLG00000026030	nlgn2b (ENSBSLG00000026011)	ENSBSLG00000025980	cldn7b (ENSBSLG00000025970) #22	npm1a (ENSBSLG00000025948)	kcnip1b (ENSBSLG00000025873)	ENSBSLG00000025871	ENSBSLG00000025870	PCDHAC2 (ENSBSLG00000025869)	ENSBSLG00000025868	ENSBSLG00000025867	PCDH1 (ENSBSLG00000025866)	ENSBSLG00000025638	ENSBSLG00000025436	ppm1db (ENSBSLG00000025189)	tbx2a (ENSBSLG00000025187)	acaca (ENSBSLG00000021616)	lhx1b (ENSBSLG00000020217)	SEZ6 (ENSBSLG00000019848)
Climbing perch	MODERN SPECIES	5	ENSATEG00000008480	ENSATEG00000008511	ENSATEG00000008542	ENSATEG00000008573	ENSATEG00000008624	ENSATEG00000008652	vamp2 (ENSATEG00000008672)	pcolcea (ENSATEG00000008687)	tmem88a (ENSATEG00000008691)	kdm6bb (ENSATEG00000008705)	ENSATEG00000030165	ENSATEG00000008791	nlgn2b (ENSATEG00000030106)	ENSATEG00000027454	ENSATEG00000008836	cldn7b (ENSATEG00000008858) #22	ENSATEG00000027376	ENSATEG00000008898	ENSATEG00000009006	ENSATEG00000009029	ENSATEG00000009035	ENSATEG00000009080	ENSATEG00000027525	ENSATEG00000009342	ENSATEG00000009376	ENSATEG00000009428	ppm1db (ENSATEG00000009495)	tbx2a (ENSATEG00000009530)	acaca (ENSATEG00000009623)	lhx1b (ENSATEG00000009832)	ENSATEG00000009906
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000008754	ENSMAMG00000008796	ENSMAMG00000008814	ENSMAMG00000008831	ENSMAMG00000008850	ENSMAMG00000026131	ENSMAMG00000008884	ENSMAMG00000008897	vamp2 (ENSMAMG00000008921)	pcolcea (ENSMAMG00000009224)	tmem88a (ENSMAMG00000009236)	kdm6bb (ENSMAMG00000009257)	ENSMAMG00000009273	nlgn2b (ENSMAMG00000009287)	ENSMAMG00000009318	cldn7b (ENSMAMG00000009333) #22	ENSMAMG00000009344	ENSMAMG00000009361	ENSMAMG00000009385	ENSMAMG00000009396	ENSMAMG00000009407	ENSMAMG00000009414	ENSMAMG00000024866	ENSMAMG00000009440	ENSMAMG00000009453	ENSMAMG00000009593	ppm1db (ENSMAMG00000009633)	tbx2a (ENSMAMG00000009659)	lhx1b (ENSMAMG00000009864)	ENSMAMG00000009882	ENSMAMG00000010318
Eupercaria	ANCESTRAL SPECIES	17	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Tetraodontidae	ANCESTRAL SPECIES	6	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Tetraodon	MODERN SPECIES	22	esrra (ENSTNIG00000010789)	KCNK4 (ENSTNIG00000010788)	adssl (ENSTNIG00000010787)	kif4 (ENSTNIG00000010786)	ammecr1 (ENSTNIG00000010785)	GABRA3 (ENSTNIG00000010784)	ENSTNIG00000010783	TMLHE (ENSTNIG00000010782)	mpp1 (ENSTNIG00000010781)	vamp2 (ENSTNIG00000010780)	pcolcea (ENSTNIG00000010779)	kdm6bb (ENSTNIG00000010778)	ENSTNIG00000010777	nlgn2b (ENSTNIG00000010776)	FGF11 (ENSTNIG00000010775)	cldn7b (ENSTNIG00000010774) #22	npm1a (ENSTNIG00000010773)	kcnip1b (ENSTNIG00000010772)	HRH2 (ENSTNIG00000010771)	PCDHAC2 (ENSTNIG00000010770)	PCDH1 (ENSTNIG00000010769)	ROBO2 (ENSTNIG00000010768)	ENSTNIG00000010767	ppm1db (ENSTNIG00000010766)	tbx2a (ENSTNIG00000010765)	acaca (ENSTNIG00000010764)	lhx1b (ENSTNIG00000010763)	SEZ6 (ENSTNIG00000010762)	ENSTNIG00000011837	ENSTNIG00000001238	VEZF1 (ENSTNIG00000011836)
Fugu	MODERN SPECIES	6	adssl (ENSTRUG00000003001)	kif4 (ENSTRUG00000004160)	ammecr1 (ENSTRUG00000025282)	TMEM164 (ENSTRUG00000002371)	ENSTRUG00000002674	ENSTRUG00000004331	TMLHE (ENSTRUG00000005859)	mpp1 (ENSTRUG00000006002)	pcolcea (ENSTRUG00000006387)	tmem88a (ENSTRUG00000020844)	kdm6bb (ENSTRUG00000022289)	ENSTRUG00000024116	nlgn2a (ENSTRUG00000007038)	ENSTRUG00000025551	FGF11 (ENSTRUG00000007364)	cldn7b (ENSTRUG00000022766) #22	npm1a (ENSTRUG00000024003)	kcnip1b (ENSTRUG00000007648)	HRH2 (ENSTRUG00000007773)	ENSTRUG00000027523	PCDHAC2 (ENSTRUG00000019863)	ENSTRUG00000031769	ENSTRUG00000007848	PCDH1 (ENSTRUG00000008240)	ENSTRUG00000022748	ROBO2 (ENSTRUG00000027553)	ENSTRUG00000031147	ppm1db (ENSTRUG00000009943)	tbx2a (ENSTRUG00000009981)	acaca (ENSTRUG00000010043)	lhx1b (ENSTRUG00000010398)
Eupecaria_A	ANCESTRAL SPECIES	17	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Eupecaria_B	ANCESTRAL SPECIES	17	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Eupecaria_C	ANCESTRAL SPECIES	15	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	12	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
European seabass	MODERN SPECIES	4	ENSDLAG00005022706	ENSDLAG00005028943	ENSDLAG00005022769	ENSDLAG00005022801	ENSDLAG00005022845	ENSDLAG00005032030	ENSDLAG00005022865	vamp2 (ENSDLAG00005033206)	pcolcea (ENSDLAG00005022926)	tmem88a (ENSDLAG00005022931)	kdm6bb (ENSDLAG00005022934)	ENSDLAG00005022957	nlgn2b (ENSDLAG00005022969)	ENSDLAG00005028738	ENSDLAG00005029193	cldn7b (ENSDLAG00005023015) #22	ENSDLAG00005023017	ENSDLAG00005023019	ENSDLAG00005023027	ENSDLAG00005023028	ENSDLAG00005023039	ENSDLAG00005023043	ENSDLAG00005023047	ENSDLAG00005004176	ENSDLAG00005004407	ENSDLAG00005006594	ppm1db (ENSDLAG00005007115)	tbx2a (ENSDLAG00005007123)	acaca (ENSDLAG00005007628)	lhx1b (ENSDLAG00005019048)	ENSDLAG00005019086
Large yellow croaker	MODERN SPECIES	493	kif4 (ENSLCRG00005020564)	ammecr1 (ENSLCRG00005020573)	TMEM164 (ENSLCRG00005020575)	ENSLCRG00005020576	GABRA3 (ENSLCRG00005020578)	ENSLCRG00005020579	TMLHE (ENSLCRG00005020581)	mpp1 (ENSLCRG00005020596)	vamp2 (ENSLCRG00005020783)	pcolcea (ENSLCRG00005020784)	tmem88a (ENSLCRG00005020787)	kdm6bb (ENSLCRG00005020788)	ENSLCRG00005020791	nlgn2b (ENSLCRG00005020797)	FGF11 (ENSLCRG00005020829)	cldn7b (ENSLCRG00005020830) #22	npm1a (ENSLCRG00005020831)	kcnip1b (ENSLCRG00005020832)	HRH2 (ENSLCRG00005020833)	ENSLCRG00005020834	PCDHAC2 (ENSLCRG00005020835)	ENSLCRG00005020836	ENSLCRG00005020837	PCDH1 (ENSLCRG00005020838)	ROBO2 (ENSLCRG00005020848)	ROBO1 (ENSLCRG00005021034)	ppm1db (ENSLCRG00005021049)	tbx2a (ENSLCRG00005021051)	acaca (ENSLCRG00005021121)	lhx1b (ENSLCRG00005023312)	SEZ6 (ENSLCRG00005023316)
Gilthead seabream	MODERN SPECIES	4	kif4 (ENSSAUG00010002034)	ammecr1 (ENSSAUG00010002120)	TMEM164 (ENSSAUG00010002125)	GABRA3 (ENSSAUG00010002134)	ENSSAUG00010002147	ENSSAUG00010002161	TMLHE (ENSSAUG00010002167)	mpp1 (ENSSAUG00010002192)	vamp2 (ENSSAUG00010002387)	pcolcea (ENSSAUG00010002390)	tmem88a (ENSSAUG00010002395)	kdm6bb (ENSSAUG00010002416)	ENSSAUG00010002444	nlgn2b (ENSSAUG00010002448)	ENSSAUG00010002562	cldn7b (ENSSAUG00010002567) #22	npm1a (ENSSAUG00010002570)	kcnip1b (ENSSAUG00010002585)	HRH2 (ENSSAUG00010002644)	ENSSAUG00010002653	PCDHAC2 (ENSSAUG00010002660)	ENSSAUG00010002670	ENSSAUG00010002675	PCDH1 (ENSSAUG00010002681)	ROBO2 (ENSSAUG00010002766)	ENSSAUG00010005660	ppm1db (ENSSAUG00010005994)	tbx2a (ENSSAUG00010005995)	acaca (ENSSAUG00010006091)	lhx1b (ENSSAUG00010009136)	SEZ6 (ENSSAUG00010009150)
Perciformes	ANCESTRAL SPECIES	25	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b	ENSGT00940000155768.A
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00530000063529.B	ENSGT00940000159316	ENSGT01090000260082.d.a.a.d	ENSGT00940000155516.u	ENSGT00940000160157	ENSGT01030000234513.B.a.d	ENSGT01030000235048	ENSGT01050000244864.B.a.g.a.a.a	ENSGT00940000159451	ENSGT00940000156455	ENSGT00940000166502	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b	ENSGT00940000155768.A
Stickleback	MODERN SPECIES	7	ENSGACG00000020335	ZC3H12B (ENSGACG00000020334)	msna (ENSGACG00000020333)	AR (ENSGACG00000020332)	OPHN1 (ENSGACG00000020331)	gjb1a (ENSGACG00000020330)	gja2 (ENSGACG00000020329)	tbc1d8b (ENSGACG00000020328)	aifm1 (ENSGACG00000020327)	glra4b (ENSGACG00000020326)	KDM6B (ENSGACG00000020325)	ENSGACG00000020324	ENSGACG00000020323	nlgn2b (ENSGACG00000020322)	ENSGACG00000020321	cldn7b (ENSGACG00000020320) #22	npm1a (ENSGACG00000020319)	kcnip1b (ENSGACG00000020318)	HRH2 (ENSGACG00000020317)	ENSGACG00000020316	PCDHAC2 (ENSGACG00000020315)	ENSGACG00000020314	PCDH1 (ENSGACG00000020313)	ROBO2 (ENSGACG00000020312)	ROBO1 (ENSGACG00000020311)	ppm1db (ENSGACG00000020310)	tbx2a (ENSGACG00000020309)	acaca (ENSGACG00000020308)	lhx1b (ENSGACG00000020307)	SEZ6 (ENSGACG00000020306)	ENSGACG00000020305
Perciformes_a	ANCESTRAL SPECIES	34	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b	ENSGT00940000155768.A
Pike perch	MODERN SPECIES	37								mpp1 (ENSSLUG00000005351)	vamp2 (ENSSLUG00000005499)	pcolcea (ENSSLUG00000005533)	tmem88a (ENSSLUG00000005664)	kdm6bb (ENSSLUG00000005672)	ENSSLUG00000005695	nlgn2b (ENSSLUG00000005721)	FGF11 (ENSSLUG00000005866)	cldn7b (ENSSLUG00000005892) #22	npm1a (ENSSLUG00000005907)	kcnip1b (ENSSLUG00000005923)	HRH2 (ENSSLUG00000005947)	PCDHAC2 (ENSSLUG00000005950)	ENSSLUG00000005958	ENSSLUG00000005964	ENSSLUG00000005967	PCDH1 (ENSSLUG00000005983)	ROBO2 (ENSSLUG00000006052)	ROBO1 (ENSSLUG00000006087)	ENSSLUG00000006166	ppm1db (ENSSLUG00000006171)	tbx2a (ENSSLUG00000006180)	acaca (ENSSLUG00000006714)	lhx1b (ENSSLUG00000014024)
Channel bull blenny	MODERN SPECIES	5	kif4 (ENSCGOG00000004211)	ammecr1 (ENSCGOG00000004142)	TMEM164 (ENSCGOG00000004139)	GABRA3 (ENSCGOG00000004093)	ENSCGOG00000004069	ENSCGOG00000024547	TMLHE (ENSCGOG00000024546)	mpp1 (ENSCGOG00000024534)	vamp2 (ENSCGOG00000024529)	pcolcea (ENSCGOG00000024525)	tmem88a (ENSCGOG00000024527)	kdm6bb (ENSCGOG00000024521)	ENSCGOG00000024515	nlgn2b (ENSCGOG00000024512)	FGF11 (ENSCGOG00000024507)	cldn7b (ENSCGOG00000024505) #22	npm1a (ENSCGOG00000024504)	kcnip1b (ENSCGOG00000024503)	HRH2 (ENSCGOG00000024501)	ENSCGOG00000024500	ENSCGOG00000024499	PCDHAC2 (ENSCGOG00000024498)	ENSCGOG00000024497	PCDH1 (ENSCGOG00000024495)	ENSCGOG00000024468	ROBO1 (ENSCGOG00000024321)	ppm1db (ENSCGOG00000024285)	tbx2a (ENSCGOG00000024284)	acaca (ENSCGOG00000024122)	lhx1b (ENSCGOG00000024077)	SEZ6 (ENSCGOG00000023983)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Nile tilapia	MODERN SPECIES	1	ammecr1 (ENSONIG00000001798)	TMEM164 (ENSONIG00000033752)	GABRA3 (ENSONIG00000001804)	ENSONIG00000001813	ENSONIG00000001820	ENSONIG00000042654	TMLHE (ENSONIG00000001823)	mpp1 (ENSONIG00000033236)	vamp2 (ENSONIG00000007000)	pcolcea (ENSONIG00000001827)	tmem88a (ENSONIG00000001835)	kdm6bb (ENSONIG00000001837)	ENSONIG00000001842	nlgn2b (ENSONIG00000001843)	FGF11 (ENSONIG00000001855)	cldn7b (ENSONIG00000001856) #22	npm1a (ENSONIG00000001860)	kcnip1b (ENSONIG00000001865)	HRH2 (ENSONIG00000001869)	ENSONIG00000028883	PCDHAC2 (ENSONIG00000027636)	ENSONIG00000029439	ENSONIG00000001870	PCDH1 (ENSONIG00000001872)	ROBO2 (ENSONIG00000001873)	ROBO1 (ENSONIG00000001894)	ppm1db (ENSONIG00000001916)	tbx2a (ENSONIG00000001919)	acaca (ENSONIG00000001922)	lhx1b (ENSONIG00000001948)	SEZ6 (ENSONIG00000001950)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	21	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b.e	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Burton s mouthbrooder	MODERN SPECIES	406	kif4 (ENSHBUG00000022029)	ammecr1 (ENSHBUG00000022077)	TMEM164 (ENSHBUG00000022100)	GABRA3 (ENSHBUG00000022159)	ENSHBUG00000022194	ENSHBUG00000001103	TMLHE (ENSHBUG00000022219)	mpp1 (ENSHBUG00000022236)	vamp2 (ENSHBUG00000022241)	pcolcea (ENSHBUG00000022245)	tmem88a (ENSHBUG00000022259)	kdm6bb (ENSHBUG00000022288)	ENSHBUG00000022304	nlgn2b (ENSHBUG00000000681)	FGF11 (ENSHBUG00000000917)	cldn7b (ENSHBUG00000022415) #22	npm1a (ENSHBUG00000000776)	kcnip1b (ENSHBUG00000022452)	HRH2 (ENSHBUG00000022462)	ENSHBUG00000000687	PCDHAC2 (ENSHBUG00000022477)	ENSHBUG00000022492	ENSHBUG00000022498
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b.e	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Haplochromini_B	ANCESTRAL SPECIES	26	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b.e	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Eastern happy	MODERN SPECIES	1	GABRA3 (ENSACLG00000009161)	ENSACLG00000009150	ENSACLG00000009102	ENSACLG00000008530	TMLHE (ENSACLG00000008508)	mpp1 (ENSACLG00000008484)	vamp2 (ENSACLG00000008474)	pcolcea (ENSACLG00000008464)	tmem88a (ENSACLG00000008457)	kdm6bb (ENSACLG00000008442)	ENSACLG00000008439	nlgn2b (ENSACLG00000008426)	ENSACLG00000008413	ENSACLG00000008405	FGF11 (ENSACLG00000008398)	cldn7b (ENSACLG00000008390) #22	npm1a (ENSACLG00000008376)	kcnip1b (ENSACLG00000008347)	HRH2 (ENSACLG00000008345)	ENSACLG00000008343	PCDHAC2 (ENSACLG00000008341)	ENSACLG00000008340	ENSACLG00000008338	PCDH1 (ENSACLG00000008333)	ENSACLG00000008326	ROBO2 (ENSACLG00000008288)	ROBO1 (ENSACLG00000008219)	ppm1db (ENSACLG00000008212)	tbx2a (ENSACLG00000008196)	acaca (ENSACLG00000008135)	lhx1b (ENSACLG00000008123)
Zebra mbuna	MODERN SPECIES	1092	cyb561d1 (ENSMZEG00005013976)	aspa (ENSMZEG00005013967)	ABR (ENSMZEG00005013860)	ENSMZEG00005013840	ENSMZEG00005013820	ENSMZEG00005013807	TMLHE (ENSMZEG00005013795)	mpp1 (ENSMZEG00005013784)	vamp2 (ENSMZEG00005013780)	pcolcea (ENSMZEG00005013775)	tmem88a (ENSMZEG00005013769)	kdm6bb (ENSMZEG00005013759)	ENSMZEG00005013750	nlgn2b (ENSMZEG00005013745)	FGF11 (ENSMZEG00005013737)	cldn7b (ENSMZEG00005013733) #22	npm1a (ENSMZEG00005013717)	kcnip1b (ENSMZEG00005013696)	HRH2 (ENSMZEG00005013687)	PCDHAC2 (ENSMZEG00005013682)	ENSMZEG00005013674	ENSMZEG00005013667	PCDH1 (ENSMZEG00005013663)	ENSMZEG00005013658	zgc:85789 (ENSMZEG00005013643)	AKAP10 (ENSMZEG00005013626)	ENSMZEG00005013597	ENSMZEG00005013586	stip1 (ENSMZEG00005013574)	rps6ka4 (ENSMZEG00005013541)	FLRT1 (ENSMZEG00005013528)
P. nyererei	MODERN SPECIES	375								mpp1 (ENSPNYG00000019578)	vamp2 (ENSPNYG00000019507)	pcolcea (ENSPNYG00000019477)	tmem88a (ENSPNYG00000019468)	kdm6bb (ENSPNYG00000019447)	ENSPNYG00000019431	nlgn2b (ENSPNYG00000019410)	FGF11 (ENSPNYG00000019395)	cldn7b (ENSPNYG00000019376) #22	npm1a (ENSPNYG00000019321)	kcnip1b (ENSPNYG00000019296)	HRH2 (ENSPNYG00000019278)	PCDHAC2 (ENSPNYG00000019271)	ENSPNYG00000019260	ENSPNYG00000019247	PCDH1 (ENSPNYG00000019237)	ENSPNYG00000019208	ENSPNYG00000019150	ppm1db (ENSPNYG00000019091)	tbx2a (ENSPNYG00000019065)	acaca (ENSPNYG00000018975)	lhx1b (ENSPNYG00000018948)	SEZ6 (ENSPNYG00000018729)	ENSPNYG00000018673
Lyretail cichlid	MODERN SPECIES	354	kif4 (ENSNBRG00000012787)	ammecr1 (ENSNBRG00000012898)	TMEM164 (ENSNBRG00000012919)	GABRA3 (ENSNBRG00000012938)	ENSNBRG00000012964	ENSNBRG00000012986	TMLHE (ENSNBRG00000013003)	mpp1 (ENSNBRG00000013022)	vamp2 (ENSNBRG00000013031)	pcolcea (ENSNBRG00000013045)	tmem88a (ENSNBRG00000013062)	kdm6bb (ENSNBRG00000013075)	ENSNBRG00000013103	nlgn2b (ENSNBRG00000013121)	FGF11 (ENSNBRG00000013151)	cldn7b (ENSNBRG00000013165) #22	npm1a (ENSNBRG00000013172)	kcnip1b (ENSNBRG00000013192)	HRH2 (ENSNBRG00000013209)	PCDHAC2 (ENSNBRG00000013243)	ENSNBRG00000013313	PCDH1 (ENSNBRG00000013845)	ENSNBRG00000013878	ENSNBRG00000013907	ppm1db (ENSNBRG00000013923)	tbx2a (ENSNBRG00000014000)	acaca (ENSNBRG00000014106)	ENSNBRG00000014218	ENSNBRG00000014225	SEZ6 (ENSNBRG00000014251)	ENSNBRG00000014413
Midas cichlid	MODERN SPECIES	1216	kif4 (ENSACIG00000014584)	ammecr1 (ENSACIG00000014561)	TMEM164 (ENSACIG00000014547)	GABRA3 (ENSACIG00000014451)	ENSACIG00000014415	ENSACIG00000014404	TMLHE (ENSACIG00000014392)	mpp1 (ENSACIG00000014338)	vamp2 (ENSACIG00000014327)	pcolcea (ENSACIG00000014313)	tmem88a (ENSACIG00000014307)	kdm6bb (ENSACIG00000014279)	ENSACIG00000014265	nlgn2b (ENSACIG00000014246)	FGF11 (ENSACIG00000014232)	cldn7b (ENSACIG00000014224) #22	npm1a (ENSACIG00000014201)	kcnip1b (ENSACIG00000014180)	HRH2 (ENSACIG00000014166)	PCDHAC2 (ENSACIG00000014146)	ENSACIG00000014140	ENSACIG00000014127	PCDH1 (ENSACIG00000014114)	ENSACIG00000014085	ROBO1 (ENSACIG00000013868)	ppm1db (ENSACIG00000013809)
Pomacentridae	ANCESTRAL SPECIES	10	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Pomacentridae_A	ANCESTRAL SPECIES	3	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Amphiprion	ANCESTRAL SPECIES	3	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Clown anemonefish	MODERN SPECIES	1279		ammecr1 (ENSAOCG00000000249)	TMEM164 (ENSAOCG00000005366)	GABRA3 (ENSAOCG00000005356)	ENSAOCG00000005320	ENSAOCG00000005256	TMLHE (ENSAOCG00000005094)	mpp1 (ENSAOCG00000005081)	vamp2 (ENSAOCG00000005061)	pcolcea (ENSAOCG00000000207)	tmem88a (ENSAOCG00000005046)	kdm6bb (ENSAOCG00000005033)	ENSAOCG00000005015	nlgn2b (ENSAOCG00000005010)	FGF11 (ENSAOCG00000002646)	cldn7b (ENSAOCG00000004986) #22	npm1a (ENSAOCG00000004978)	kcnip1b (ENSAOCG00000004964)	HRH2 (ENSAOCG00000004938)	PCDHAC2 (ENSAOCG00000004930)	ENSAOCG00000004925	ENSAOCG00000000195	ENSAOCG00000004878
Orange clownfish	MODERN SPECIES	6	kif4 (ENSAPEG00000009008)	ammecr1 (ENSAPEG00000008995)	TMEM164 (ENSAPEG00000008960)	GABRA3 (ENSAPEG00000008914)	ENSAPEG00000008891	ENSAPEG00000008882	TMLHE (ENSAPEG00000008860)	mpp1 (ENSAPEG00000008835)	vamp2 (ENSAPEG00000008822)	tmem88a (ENSAPEG00000008794)	pcolcea (ENSAPEG00000008760)	kdm6bb (ENSAPEG00000008717)	ENSAPEG00000008708	nlgn2b (ENSAPEG00000008681)	FGF11 (ENSAPEG00000008651)	cldn7b (ENSAPEG00000008614) #22	npm1a (ENSAPEG00000008594)	kcnip1b (ENSAPEG00000008545)	HRH2 (ENSAPEG00000008522)	ENSAPEG00000008518	PCDHAC2 (ENSAPEG00000008491)	ENSAPEG00000008487	ENSAPEG00000008479	PCDH1 (ENSAPEG00000008451)	ENSAPEG00000008386	ENSAPEG00000008293	ENSAPEG00000008258	ppm1db (ENSAPEG00000008249)	tbx2a (ENSAPEG00000008239)	ENSAPEG00000008227	ENSAPEG00000008209
Spiny chromis	MODERN SPECIES	2603																cldn7b (ENSAPOG00000002793) #22	npm1a (ENSAPOG00000002813)	kcnip1b (ENSAPOG00000002837)
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00990000204690	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n
Oryzias	ANCESTRAL SPECIES	14	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00990000204690	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00990000204690	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000178675	ENSGT00940000156706.b
Chinese medaka	MODERN SPECIES	717															ENSOSIG00000014661	cldn7b (ENSOSIG00000014664) #22	npm1a (ENSOSIG00000014667)	kcnip1b (ENSOSIG00000014673)	HRH2 (ENSOSIG00000014711)	ENSOSIG00000014712	PCDHAC2 (ENSOSIG00000014713)	ENSOSIG00000014714	ENSOSIG00000014715	ENSOSIG00000014716	ENSOSIG00000014717	ENSOSIG00000014718	PCDH1 (ENSOSIG00000014719)	ROBO2 (ENSOSIG00000014733)	ROBO1 (ENSOSIG00000015563)	ppm1db (ENSOSIG00000015685)	TBX2 (ENSOSIG00000015687)
Japanese Medaka HdrR	MODERN SPECIES	5	TMEM164 (ENSORLG00000010427)	ENSORLG00000016291	GABRA3 (ENSORLG00000010408)	ENSORLG00000010333	TMLHE (ENSORLG00000010326)	mpp1 (ENSORLG00000010312)	vamp2 (ENSORLG00000010306)	pcolcea (ENSORLG00000010290)	ENSORLG00000030519	kdm6bb (ENSORLG00000010264)	ENSORLG00000010242	ENSORLG00000025447	nlgn2b (ENSORLG00000010232)	ENSORLG00000028085	ENSORLG00000023090	cldn7b (ENSORLG00000010194) #22	npm1a (ENSORLG00000010179)	kcnip1b (ENSORLG00000010149)	HRH2 (ENSORLG00000010128)	ENSORLG00000026282	PCDHAC2 (ENSORLG00000010124)	ENSORLG00000023878	ENSORLG00000026884	ENSORLG00000030001	ENSORLG00000028076	PCDH1 (ENSORLG00000010092)	ENSORLG00000024209	ENSORLG00000026763	ENSORLG00000010067	ENSORLG00000010043	ppm1db (ENSORLG00000010017)
Oryzias_b	ANCESTRAL SPECIES	13			ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00970000198378	ENSGT00990000204690	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b
Javanese ricefish	MODERN SPECIES	5	SPNS2 (ENSOJAG00000018511)	emc6 (ENSOJAG00000018699)	SHPK (ENSOJAG00000018708)	ammecr1 (ENSOJAG00000018723)	TMEM164 (ENSOJAG00000018757)	GABRA3 (ENSOJAG00000018791)	ENSOJAG00000018911	mpp1 (ENSOJAG00000019052)	TMLHE (ENSOJAG00000019117)	vamp2 (ENSOJAG00000019137)	pcolcea (ENSOJAG00000019146)	tmem88a (ENSOJAG00000019175)	ENSOJAG00000019192	nlgn2b (ENSOJAG00000019219)	ENSOJAG00000019367	cldn7b (ENSOJAG00000019397) #22	npm1a (ENSOJAG00000019410)	kcnip1b (ENSOJAG00000019484)	HRH2 (ENSOJAG00000019508)	ENSOJAG00000001724	ENSOJAG00000001738	PCDHAC2 (ENSOJAG00000001757)	ENSOJAG00000001794	PCDH1 (ENSOJAG00000001796)	ENSOJAG00000001810	ROBO2 (ENSOJAG00000002064)	ROBO1 (ENSOJAG00000003022)	ppm1db (ENSOJAG00000004615)	tbx2a (ENSOJAG00000004628)	lhx1b (ENSOJAG00000010453)	SEZ6 (ENSOJAG00000010565)
Indian medaka	MODERN SPECIES	4	eral1 (ENSOMEG00000007662)	flot2a (ENSOMEG00000007619)	ammecr1 (ENSOMEG00000007551)	TMEM164 (ENSOMEG00000007512)	GABRA3 (ENSOMEG00000007469)	ENSOMEG00000007438	TMLHE (ENSOMEG00000007392)	mpp1 (ENSOMEG00000007364)	vamp2 (ENSOMEG00000007317)	pcolcea (ENSOMEG00000007308)	tmem88a (ENSOMEG00000007296)	kdm6bb (ENSOMEG00000007268)	ENSOMEG00000007211	nlgn2b (ENSOMEG00000007179)	ENSOMEG00000000168	cldn7b (ENSOMEG00000007100) #22	npm1a (ENSOMEG00000007083)	kcnip1b (ENSOMEG00000007050)	HRH2 (ENSOMEG00000006985)	ENSOMEG00000006970	PCDHAC2 (ENSOMEG00000006953)	ENSOMEG00000006944	ENSOMEG00000006940	ENSOMEG00000006929	ENSOMEG00000006921	PCDH1 (ENSOMEG00000006912)	ROBO2 (ENSOMEG00000006879)	ROBO1 (ENSOMEG00000006795)	ppm1db (ENSOMEG00000006679)	ENSOMEG00000000824	acaca (ENSOMEG00000006649)
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Aplocheiloidei	ANCESTRAL SPECIES	33	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444.j	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015005350	ENSNFUG00015005347	ENSNFUG00015005317	ENSNFUG00015005311	ENSNFUG00015005308	GABRQ (ENSNFUG00015005087)	TMLHE (ENSNFUG00015005038)	MPP1 (ENSNFUG00015005016)	VAMP2 (ENSNFUG00015004991)	PCOLCE (ENSNFUG00015004929)	tmem88a (ENSNFUG00015004898)	KDM6BB (ENSNFUG00015004887)	ENSNFUG00015004876	nlgn2b (ENSNFUG00015004757)	FGF11B (ENSNFUG00015004711)	cldn7b (ENSNFUG00015004702) #22	NPM1A (ENSNFUG00015025089)	KCNIP1B (ENSNFUG00015025085)	HRH2 (ENSNFUG00015025084)	FAM196B (ENSNFUG00015025082)	PCDHAC2 (ENSNFUG00015025079)	PCDHAC2 (ENSNFUG00015025077)	PCDH10 (ENSNFUG00015025075)	ENSNFUG00015025074	PCDH1A (ENSNFUG00015025071)	ENSNFUG00015025068	ENSNFUG00015025066	ROBO2 (ENSNFUG00015024955)	ENSNFUG00015024915	ROBO1 (ENSNFUG00015024808)	ppm1db (ENSNFUG00015024772)
Mangrove rivulus	MODERN SPECIES	22	ammecr1 (ENSKMAG00000011112)	TMEM164 (ENSKMAG00000011090)	GABRA3 (ENSKMAG00000011066)	ENSKMAG00000011032	TMLHE (ENSKMAG00000011010)	mpp1 (ENSKMAG00000010969)	vamp2 (ENSKMAG00000010946)	pcolcea (ENSKMAG00000010926)	tmem88a (ENSKMAG00000010911)	kdm6bb (ENSKMAG00000010892)	ENSKMAG00000010875	nlgn2b (ENSKMAG00000010837)	ENSKMAG00000010799	ENSKMAG00000010787	ENSKMAG00000010766	cldn7b (ENSKMAG00000010737) #22	npm1a (ENSKMAG00000010709)	kcnip1b (ENSKMAG00000010676)	HRH2 (ENSKMAG00000010662)	ENSKMAG00000010648	PCDHAC2 (ENSKMAG00000010638)	ENSKMAG00000010613	ENSKMAG00000010596	ENSKMAG00000010578	PCDH1 (ENSKMAG00000010555)	ENSKMAG00000010481	ROBO1 (ENSKMAG00000010382)	ppm1db (ENSKMAG00000010343)	tbx2a (ENSKMAG00000010328)	acaca (ENSKMAG00000010202)	lhx1b (ENSKMAG00000010158)
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
NAME_4	ANCESTRAL SPECIES	5	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a	ENSGT00940000156995.b	ENSGT00940000155768.A
Sheepshead minnow	MODERN SPECIES	168	adssl (ENSCVAG00000009265)	kif4 (ENSCVAG00000009212)	ammecr1 (ENSCVAG00000009197)	TMEM164 (ENSCVAG00000009191)	GABRA3 (ENSCVAG00000009174)	ENSCVAG00000009151	TMLHE (ENSCVAG00000009148)	mpp1 (ENSCVAG00000009127)	vamp2 (ENSCVAG00000009117)	pcolcea (ENSCVAG00000009104)	tmem88a (ENSCVAG00000009096)	kdm6bb (ENSCVAG00000009082)	ENSCVAG00000009033	nlgn2b (ENSCVAG00000009024)	FGF11 (ENSCVAG00000008999)	cldn7b (ENSCVAG00000008965) #22	npm1a (ENSCVAG00000008960)	kcnip1b (ENSCVAG00000008950)	HRH2 (ENSCVAG00000008936)	PCDHAC2 (ENSCVAG00000008923)	ENSCVAG00000008913	ENSCVAG00000008901	PCDH1 (ENSCVAG00000008897)	ENSCVAG00000008883
Mummichog	MODERN SPECIES	652													ENSFHEG00000012547	ENSFHEG00000012533	FGF11 (ENSFHEG00000012521)	cldn7b (ENSFHEG00000012505) #22	npm1a (ENSFHEG00000012496)	kcnip1b (ENSFHEG00000012489)	HRH2 (ENSFHEG00000012482)
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00390000015553.a.a.a	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Platyfish	MODERN SPECIES	2	adssl (ENSXMAG00000005060)	kif4 (ENSXMAG00000005017)	ammecr1 (ENSXMAG00000026670)	TMEM164 (ENSXMAG00000004995)	GABRA3 (ENSXMAG00000004953)	ENSXMAG00000004933	TMLHE (ENSXMAG00000004928)	mpp1 (ENSXMAG00000004921)	vamp2 (ENSXMAG00000000353)	pcolcea (ENSXMAG00000000354)	tmem88a (ENSXMAG00000024040)	kdm6bb (ENSXMAG00000000363)	ENSXMAG00000000366	nlgn2b (ENSXMAG00000000369)	FGF11 (ENSXMAG00000000385)	cldn7b (ENSXMAG00000000393) #22	npm1a (ENSXMAG00000000396)	kcnip1b (ENSXMAG00000000405)	HRH2 (ENSXMAG00000024792)	ENSXMAG00000023262	PCDHAC2 (ENSXMAG00000026972)	ENSXMAG00000026894	ENSXMAG00000000418	ENSXMAG00000021668	ENSXMAG00000019451	PCDH1 (ENSXMAG00000000419)	ENSXMAG00000026173	ROBO2 (ENSXMAG00000000420)	ENSXMAG00000027104	ppm1db (ENSXMAG00000000484)	tbx2a (ENSXMAG00000000486)
Poecilia	ANCESTRAL SPECIES	7	ENSGT00390000017791	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00950000183362	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Guppy	MODERN SPECIES	444	ENSPREG00000002113	ENSPREG00000002096	ENSPREG00000002062	ENSPREG00000002011	ENSPREG00000001999	ENSPREG00000001964	ENSPREG00000001933	ENSPREG00000001903	mpp1 (ENSPREG00000001845)	vamp2 (ENSPREG00000001829)	tmem88a (ENSPREG00000001803)	kdm6bb (ENSPREG00000001746)	ENSPREG00000001729	nlgn2b (ENSPREG00000001696)	ENSPREG00000001665	cldn7b (ENSPREG00000001658) #22	npm1a (ENSPREG00000001647)	kcnip1b (ENSPREG00000001624)	HRH2 (ENSPREG00000001612)	PCDHAC2 (ENSPREG00000001597)	ENSPREG00000001582	ENSPREG00000001576	ENSPREG00000001556	PCDH1 (ENSPREG00000001526)	ENSPREG00000001469	ROBO1 (ENSPREG00000001437)	ENSPREG00000001431	ppm1db (ENSPREG00000001418)	ENSPREG00000001395	acaca (ENSPREG00000001223)	ENSPREG00000001213
NAME_6	ANCESTRAL SPECIES	16	ENSGT00390000017791	ENSGT00940000158195	ENSGT00390000010397.a	ENSGT00390000007430	ENSGT00940000159444	ENSGT00940000164188	ENSGT00530000063582.a	ENSGT00940000158744	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00940000160554.a	ENSGT00940000164725.a.b.a	ENSGT00940000163777.b.a.b	ENSGT00940000155521.a.b	ENSGT00940000156324.f.b.c	ENSGT00940000156324.f.b.d	ENSGT00940000154477.jc.b	ENSGT00940000155672.h	ENSGT00940000158439.n	ENSGT00940000156706.b	ENSGT00940000164085.d.a
Sailfin molly	MODERN SPECIES	412															ENSPLAG00000001100	cldn7b (ENSPLAG00000001097) #22	npm1a (ENSPLAG00000001093)	kcnip1b (ENSPLAG00000001089)	HRH2 (ENSPLAG00000001087)	PCDHAC2 (ENSPLAG00000001085)	ENSPLAG00000001084	ENSPLAG00000001083
Amazon molly	MODERN SPECIES	266	mthfs (ENSPFOG00000019039)	kif4 (ENSPFOG00000019046)	ammecr1 (ENSPFOG00000019068)	TMEM164 (ENSPFOG00000019076)	GABRA3 (ENSPFOG00000019092)	ENSPFOG00000019123	TMLHE (ENSPFOG00000019134)	mpp1 (ENSPFOG00000019139)	vamp2 (ENSPFOG00000019145)	pcolcea (ENSPFOG00000019150)	tmem88a (ENSPFOG00000019154)	kdm6bb (ENSPFOG00000019157)	ENSPFOG00000019160	nlgn2b (ENSPFOG00000019161)	ENSPFOG00000019167	cldn7b (ENSPFOG00000019168) #22	npm1a (ENSPFOG00000019173)	kcnip1b (ENSPFOG00000019177)	HRH2 (ENSPFOG00000019178)	ENSPFOG00000019180	PCDHAC2 (ENSPFOG00000019182)	ENSPFOG00000019185	PCDH1 (ENSPFOG00000019187)	ENSPFOG00000022631	ENSPFOG00000019197	ROBO1 (ENSPFOG00000019224)	ppm1db (ENSPFOG00000019247)	tbx2a (ENSPFOG00000021683)	acaca (ENSPFOG00000019266)	lhx1b (ENSPFOG00000019290)	SEZ6 (ENSPFOG00000019295)
Protacanthopterygii	ANCESTRAL SPECIES	11	ENSGT00510000047092	ENSGT00530000063582.a	ENSGT00390000005067.b	ENSGT00940000164382.a	ENSGT00940000158370	ENSGT00940000159217	ENSGT00940000159264.e	ENSGT00940000163776.a.b	ENSGT00940000160414.d	ENSGT00940000160323.a.b	ENSGT00940000159845.a.b	ENSGT01030000234592.A.b.b.a.b.b.b	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT01030000234592.A.b.b.a.b.a.a.b	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000166282.B	ENSGT00940000160629.a	ENSGT00940000166176	ENSGT00940000158048.d	ENSGT00940000165390.b.c.a	ENSGT00940000158761.b	ENSGT00390000017848	ENSGT00950000183116.b.a.a.b.a.a.b	ENSGT00990000210446	ENSGT00940000164173.b.a.c.b	ENSGT00940000163777.b.a.b	ENSGT00390000009004.c	ENSGT01060000248588.a.c.a.b
Northern pike	MODERN SPECIES	6	and3 (ENSELUG00000014448)	VAMP2 (ENSELUG00000014434)	per1a (ENSELUG00000014417)	pcolcea (ENSELUG00000000521)	tmem88a (ENSELUG00000014395)	kdm6bb (ENSELUG00000014376)	EFNB3 (ENSELUG00000014293)	GIGYF1 (ENSELUG00000014244)	zgc:172339 (ENSELUG00000014121)	ENSELUG00000014111	ENSELUG00000014103	epob (ENSELUG00000014065)	nlgn2b (ENSELUG00000013887)	ENSELUG00000025109	FGF11 (ENSELUG00000013849)	cldn7b (ENSELUG00000013837) #22	ponzr2 (ENSELUG00000013800)	ENSELUG00000013745	ugt5g2 (ENSELUG00000001387)	tlx3b (ENSELUG00000001456)	npm1a (ENSELUG00000013705)	kcnip1b (ENSELUG00000013683)	ENSELUG00000013643	HRH2 (ENSELUG00000013591)	ENSELUG00000013567	ENSELUG00000013559	ENSELUG00000013431	pcdh2g13 (ENSELUG00000016731)	ENSELUG00000017906	ENSELUG00000013396	ENSELUG00000032793
Osteoglossiformes	ANCESTRAL SPECIES	61	ENSGT00390000014721	ENSGT00390000009664.b #37	ENSGT00950000182887.C.a.a.a.a.a.d	ENSGT00940000159929	ENSGT00950000183073.a.a.b	ENSGT00940000164382.a	ENSGT00940000159264.e	ENSGT00940000160414.d	ENSGT00940000160323.a.a.b	ENSGT00940000159845.c	ENSGT00510000048483	ENSGT00390000017226.a	ENSGT01030000234592.A.b.b.a.b.a.b	ENSGT00940000166430	ENSGT00940000158058.b	ENSGT00940000160672 #22	ENSGT00940000174541	ENSGT00940000163701.b.a.b	ENSGT00940000163701.b.a.a.a.b	ENSGT00940000160629.c	ENSGT00940000166176	ENSGT00940000158048.d
P. kingsleyae	MODERN SPECIES	248	rnasekb (ENSPKIG00000019376) #37	ARRB2 (ENSPKIG00000019390)	ap4m1 (ENSPKIG00000019442)	COPS6 (ENSPKIG00000019588)	aurkb (ENSPKIG00000019611)	vamp2 (ENSPKIG00000019641)	pcolcea (ENSPKIG00000019688)	kdm6bb (ENSPKIG00000019736)	efnb3b (ENSPKIG00000019805)	GIGYF1 (ENSPKIG00000019832)	pop7 (ENSPKIG00000019869)	ENSPKIG00000019880	ENSPKIG00000019902	nlgn2b (ENSPKIG00000019936)	FGF11 (ENSPKIG00000019987)	cldn7b (ENSPKIG00000020007) #22	ENSPKIG00000020029	ponzr2 (ENSPKIG00000020040)	ENSPKIG00000020063	ENSPKIG00000020100	ENSPKIG00000020132
Reedfish	MODERN SPECIES	11	sox19a (ENSECRG00000010764)	fxr2 (ENSECRG00000010770)	gabarapa (ENSECRG00000010785)	ctdnep1b (ENSECRG00000010793) #24	ENSECRG00000010804 #23	phf23b (ENSECRG00000010808) #26	ENSECRG00000010810	ENSECRG00000010812	nlgn2a (ENSECRG00000010815) #10	tmem256 (ENSECRG00000010817) #11	tmem102 (ENSECRG00000010823)	ENSECRG00000010825	fgf11a (ENSECRG00000010833)	chrnb1 (ENSECRG00000010857)	chrnb1l (ENSECRG00000010872)	cldn7b (ENSECRG00000010876) #22	ENSECRG00000010882	ENSECRG00000010887	ponzr1 (ENSECRG00000010892)	ENSECRG00000010894	acadvl (ENSECRG00000010900) #28	dvl2 (ENSECRG00000010909) #27	ENSECRG00000003901	ENSECRG00000003913	ENSECRG00000003928	ENSECRG00000003931	ENSECRG00000003937	ENSECRG00000003945	ENSECRG00000003950	ENSECRG00000003955	ENSECRG00000003962
Elephant shark	MODERN SPECIES	2278															CLDN16 (ENSCMIG00000004586)	cldn7b (ENSCMIG00000004582) #22