Rodentia_B	ANCESTRAL SPECIES	46				ENSGT01100000263486.a.b.a.a.a.a.a.b.b ##12	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ##12	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ##12	ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00940000161967 #16	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Myomorpha	ANCESTRAL SPECIES	28			ENSGT01100000263486.a.b.a.a.a.a.a.b.b ##12	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ##12	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ##12	ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Muroidea	ANCESTRAL SPECIES	10						ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Murinae	ANCESTRAL SPECIES	7	ENSGT00390000011596.a #7	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00950000183522 #34	ENSGT00940000163997 #35
Mus	ANCESTRAL SPECIES	2	ENSGT00390000011596.a #7	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00950000183522 #34	ENSGT00940000163997 #35
Shrew mouse	MODERN SPECIES	5	Nt5m (MGP_PahariEiJ_G0017576) #7	Cops3 (MGP_PahariEiJ_G0017575) #8	Flcn (MGP_PahariEiJ_G0017574) #9	Pld6 (MGP_PahariEiJ_G0017573) #10	Mprip (MGP_PahariEiJ_G0017572) #11	Or2w25 (MGP_PahariEiJ_G0008415) #12	Or2aa1 (MGP_PahariEiJ_G0017571) #13	Or2b11 (MGP_PahariEiJ_G0017570) #14	MGP_PahariEiJ_G0017569 #15	Zkscan17 (MGP_PahariEiJ_G0017568) #16	Zfp867 (MGP_PahariEiJ_G0017567) #17	Jmjd4 (MGP_PahariEiJ_G0017566) #18	MGP_PahariEiJ_G0017565 #19	Prss38 (MGP_PahariEiJ_G0017564) #20	Wnt9a (MGP_PahariEiJ_G0017563) #21	Wnt3a (MGP_PahariEiJ_G0017562) #22	Arf1 (MGP_PahariEiJ_G0017561) #23	2310033P09Rik (MGP_PahariEiJ_G0017560) #24	Mrpl55 (MGP_PahariEiJ_G0017559) #25	Guk1 (MGP_PahariEiJ_G0017558) #26	Gjc2 (MGP_PahariEiJ_G0017557) #27	Iba57 (MGP_PahariEiJ_G0017556) #28	Obscn (MGP_PahariEiJ_G0017555) #29	Trim11 (MGP_PahariEiJ_G0017554) #30	Trim17 (MGP_PahariEiJ_G0017553) #31	H2ac25 (MGP_PahariEiJ_G0017552) #32	H2bc27 (MGP_PahariEiJ_G0017551) #33	MGP_PahariEiJ_G0017550 #34	Btnl10 (MGP_PahariEiJ_G0017549) #35	Zfp39 (MGP_PahariEiJ_G0017548) #36	2810021J22Rik (MGP_PahariEiJ_G0017547) #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000011596.a #7	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b.g.a #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00950000183522 #34	ENSGT00940000163997 #35
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000011596.a #7	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b.g.a #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00950000183522 #34	ENSGT00940000163997 #35
Mouse	MODERN SPECIES	2	Nt5m (ENSMUSG00000032615) #7	Cops3 (ENSMUSG00000019373) #8	Flcn (ENSMUSG00000032633) #9	Pld6 (ENSMUSG00000043648) #10	Mprip (ENSMUSG00000005417) #11	Or2w25 (ENSMUSG00000044061) #12	Or2aa1 (ENSMUSG00000048919) #13	Or2b11 (ENSMUSG00000059610) #14	Nlrp3 (ENSMUSG00000032691) #15	Zkscan17 (ENSMUSG00000020472) #16	Zfp867 (ENSMUSG00000054519) #17	Jmjd4 (ENSMUSG00000036819) #18	Snap47 (ENSMUSG00000009894) #19	Prss38 (ENSMUSG00000049291) #20	Wnt9a (ENSMUSG00000000126) #21	Wnt3a (ENSMUSG00000009900) #22	Arf1 (ENSMUSG00000048076) #23	2310033P09Rik (ENSMUSG00000020441) #24	Mrpl55 (ENSMUSG00000036860) #25	Guk1 (ENSMUSG00000020444) #26	Gjc2 (ENSMUSG00000043448) #27	Iba57 (ENSMUSG00000049287) #28	Obscn (ENSMUSG00000061462) #29	Trim11 (ENSMUSG00000020455) #30	H3f4 (ENSMUSG00000080152)	Trim17 (ENSMUSG00000036964) #31	H2ac25 (ENSMUSG00000078851) #32	H2bc26-ps (ENSMUSG00000080712) ##33	H2bc27 (ENSMUSG00000056895) #33	Rnf187 (ENSMUSG00000020496) #34	Btnl10 (ENSMUSG00000020490) #35
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000011596.a #7	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b.g.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00950000183522 #34	ENSGT00940000163997 #35
Steppe mouse	MODERN SPECIES	3105	Flcn (ENSMSIG00000020231) #9	Pld6 (ENSMSIG00000020253) #10	Mprip (ENSMSIG00000020270) #11	Or2aa1 (ENSMSIG00000020924) #13	Or2b11 (ENSMSIG00000020930) #14	Nlrp3 (ENSMSIG00000020937) #15	ENSMSIG00000020981	ENSMSIG00000020992	Zkscan17 (ENSMSIG00000020997) #16	ENSMSIG00000021018	Zfp867 (ENSMSIG00000021023) #17	Jmjd4 (ENSMSIG00000021041) #18	Snap47 (ENSMSIG00000021067) #19	Prss38 (ENSMSIG00000021101) #20	Wnt9a (ENSMSIG00000021113) #21	Wnt3a (ENSMSIG00000021119) #22	ENSMSIG00000021128 #23	2310033P09Rik (ENSMSIG00000021149) #24	Mrpl55 (ENSMSIG00000021173) #25	Guk1 (ENSMSIG00000021189) #26	Gjc2 (ENSMSIG00000021219) #27	Iba57 (ENSMSIG00000021231) #28	ENSMSIG00000021247	Obscn (ENSMSIG00000021262) #29	ENSMSIG00000021680	Trim11 (ENSMSIG00000021692) #30	Trim17 (ENSMSIG00000021747) #31	H3f4 (ENSMSIG00000021760)	H2ac25 (ENSMSIG00000021773) #32	H2bc26-ps (ENSMSIG00000021777) ##33	H2bc27 (ENSMSIG00000021813) #33
spretus	MODERN SPECIES	2	Nt5m (MGP_SPRETEiJ_G0017281) #7	Cops3 (MGP_SPRETEiJ_G0017280) #8	Flcn (MGP_SPRETEiJ_G0017279) #9	Pld6 (MGP_SPRETEiJ_G0017278) #10	Mprip (MGP_SPRETEiJ_G0017277) #11	MGP_SPRETEiJ_G0009402 ##13	MGP_SPRETEiJ_G0017276 #13	Or2b11 (MGP_SPRETEiJ_G0017275) #14	Nlrp3 (MGP_SPRETEiJ_G0017274) #15	Zkscan17 (MGP_SPRETEiJ_G0017273) #16	Zfp867 (MGP_SPRETEiJ_G0017272) #17	Jmjd4 (MGP_SPRETEiJ_G0017271) #18	Snap47 (MGP_SPRETEiJ_G0017270) #19	Prss38 (MGP_SPRETEiJ_G0017269) #20	Wnt9a (MGP_SPRETEiJ_G0017268) #21	Wnt3a (MGP_SPRETEiJ_G0017267) #22	2310033P09Rik (MGP_SPRETEiJ_G0017266) #24	Mrpl55 (MGP_SPRETEiJ_G0017265) #25	Guk1 (MGP_SPRETEiJ_G0017264) #26	Gjc2 (MGP_SPRETEiJ_G0017263) #27	Iba57 (MGP_SPRETEiJ_G0017262) #28	Obscn (MGP_SPRETEiJ_G0017261) #29	Trim11 (MGP_SPRETEiJ_G0017260) #30	Trim17 (MGP_SPRETEiJ_G0017259) #31	H2ac25 (MGP_SPRETEiJ_G0017258) #32	H2bc27 (MGP_SPRETEiJ_G0017257) #33	MGP_SPRETEiJ_G0017256 #34	Btnl10 (MGP_SPRETEiJ_G0017255) #35	Zfp39 (MGP_SPRETEiJ_G0017254) #36	2810021J22Rik (MGP_SPRETEiJ_G0017253) #37	Gm12258 (MGP_SPRETEiJ_G0017252) ##37
Ryukyu mouse	MODERN SPECIES	2	Nt5m (MGP_CAROLIEiJ_G0016446) #7	Cops3 (MGP_CAROLIEiJ_G0016445) #8	Flcn (MGP_CAROLIEiJ_G0016444) #9	Pld6 (MGP_CAROLIEiJ_G0016443) #10	Mprip (MGP_CAROLIEiJ_G0016442) #11	Or2w25 (MGP_CAROLIEiJ_G0008942) #12	Or2aa1 (MGP_CAROLIEiJ_G0016441) #13	Or2b11 (MGP_CAROLIEiJ_G0016440) #14	Nlrp3 (MGP_CAROLIEiJ_G0016439) #15	Zkscan17 (MGP_CAROLIEiJ_G0016438) #16	Zfp867 (MGP_CAROLIEiJ_G0016437) #17	Jmjd4 (MGP_CAROLIEiJ_G0016436) #18	MGP_CAROLIEiJ_G0016435 #19	Prss38 (MGP_CAROLIEiJ_G0016434) #20	Wnt9a (MGP_CAROLIEiJ_G0016433) #21	Wnt3a (MGP_CAROLIEiJ_G0016432) #22	MGP_CAROLIEiJ_G0016431 #23	MGP_CAROLIEiJ_G0016430 #23	2310033P09Rik (MGP_CAROLIEiJ_G0016429) #24	Mrpl55 (MGP_CAROLIEiJ_G0016428) #25	Guk1 (MGP_CAROLIEiJ_G0016427) #26	Gjc2 (MGP_CAROLIEiJ_G0016426) #27	Iba57 (MGP_CAROLIEiJ_G0016425) #28	MGP_CAROLIEiJ_G0016424 #29	Trim11 (MGP_CAROLIEiJ_G0016423) #30	Trim17 (MGP_CAROLIEiJ_G0016421) #31	H2ac25 (MGP_CAROLIEiJ_G0016422) #32	H2bc27 (MGP_CAROLIEiJ_G0016420) #33	MGP_CAROLIEiJ_G0016419 #34	Btnl10 (MGP_CAROLIEiJ_G0016418) #35	Zfp39 (MGP_CAROLIEiJ_G0016417) #36
Rat	MODERN SPECIES	1	Nt5m (ENSRNOG00000003332) #7	Cops3 (ENSRNOG00000053943) #8	Flcn (ENSRNOG00000003302) #9	Pld6 (ENSRNOG00000021657) #10	Mprip (ENSRNOG00000003226) #11	Or2aa1 (ENSRNOG00000003210) #13	Or2b11 (ENSRNOG00000022244) #14	Nlrp3 (ENSRNOG00000003170) #15	Zfp496 (ENSRNOG00000003129) #16	Ftl1 (ENSRNOG00000020843)	Zfp867 (ENSRNOG00000022431) #17	Jmjd4 (ENSRNOG00000022438) #18	Snap47 (ENSRNOG00000022472) #19	Prss38 (ENSRNOG00000022548) #20	Wnt9a (ENSRNOG00000003066) #21	Wnt3a (ENSRNOG00000003039) #22	Arf1 (ENSRNOG00000060229) #23	C10h1orf35 (ENSRNOG00000002944) #24	Mrpl55 (ENSRNOG00000002943) #25	Guk1 (ENSRNOG00000002928) #26	Gjc2 (ENSRNOG00000038328) #27	Iba57 (ENSRNOG00000068756) #28	Obscn (ENSRNOG00000058068) #29	Trim11 (ENSRNOG00000002915) #30	H2ac25 (ENSRNOG00000022983) #31	H2ac25 (ENSRNOG00000064520) #32	H2bu1 (ENSRNOG00000066919) ##33	Hist3h2ba (ENSRNOG00000043419) #33	Rnf187 (ENSRNOG00000049219) #34	Btnl10 (ENSRNOG00000043019) #35	Zfp39 (ENSRNOG00000014712) #36
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.a.a #13	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00900000143207	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Golden Hamster	MODERN SPECIES	627	Cops3 (ENSMAUG00000017378) #8	Flcn (ENSMAUG00000017523) #9	Pld6 (ENSMAUG00000013977) #10	ENSMAUG00000015837 #11	Or2w25 (ENSMAUG00000020886) #12	Or2b11 (ENSMAUG00000010476) #14	Nlrp3 (ENSMAUG00000020051) #15	ENSMAUG00000006329	ENSMAUG00000017910	Zkscan17 (ENSMAUG00000016630) #16	ENSMAUG00000019046	Jmjd4 (ENSMAUG00000017265) #18	Snap47 (ENSMAUG00000020014) #19	Prss38 (ENSMAUG00000019978) #20	Wnt9a (ENSMAUG00000021643) #21	Wnt3a (ENSMAUG00000021475) #22	ENSMAUG00000022253 #23	2310033P09Rik (ENSMAUG00000019958) #24	Guk1 (ENSMAUG00000022283) #26	Gjc2 (ENSMAUG00000020150) #27	Iba57 (ENSMAUG00000020575) #28	Obscn (ENSMAUG00000022279) #29	Trim11 (ENSMAUG00000001510) #30	Trim17 (ENSMAUG00000004817) #31	H3f4 (ENSMAUG00000010700)	ENSMAUG00000010470	H2ac25 (ENSMAUG00000010628) #32	H2bc26-ps (ENSMAUG00000010794) ##33	H2bc27 (ENSMAUG00000010540) #33	ENSMAUG00000021471	ENSMAUG00000020727
Chinese hamster chok1gshd	MODERN SPECIES	229	Cops3 (ENSCGRG00001023058) #8	Flcn (ENSCGRG00001022220) #9	Pld6 (ENSCGRG00001021455) #10	Mprip (ENSCGRG00001003308) #11	ENSCGRG00001005098 ##12	Or2aa1 (ENSCGRG00001007439) #13	Or2b11 (ENSCGRG00001008156) #14	Nlrp3 (ENSCGRG00001021138) #15	ENSCGRG00001021260	Zkscan17 (ENSCGRG00001020767) #16	Zfp867 (ENSCGRG00001016010) #17	Jmjd4 (ENSCGRG00001013252) #18	Snap47 (ENSCGRG00001004500) #19	Prss38 (ENSCGRG00001019522) #20	Wnt9a (ENSCGRG00001016816) #21	Wnt3a (ENSCGRG00001015217) #22	Arf1 (ENSCGRG00001013922) #23	2310033P09Rik (ENSCGRG00001021154) #24	Mrpl55 (ENSCGRG00001020506) #25	ENSCGRG00001016847 #26	Gjc2 (ENSCGRG00001008796) #27	Iba57 (ENSCGRG00001007484) #28	Obscn (ENSCGRG00001023809) #29	Trim11 (ENSCGRG00001016227) #30	Trim17 (ENSCGRG00001017038) #31	ENSCGRG00001009610	H2bc27 (ENSCGRG00001005703) #33	H2bc26-ps (ENSCGRG00001013795) ##33	H2ac25 (ENSCGRG00001008750) #32	ENSCGRG00001017170	ENSCGRG00001015992
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000017379	ENSGT00390000011596.a #7	ENSGT00940000153653.a.b.a.b #8	ENSGT00390000009864 #9	ENSGT00390000004368 #10	ENSGT00940000155286 #11	ENSGT01100000263486.a.b.a.a.a.a.b ##12	ENSGT01090000260044.A.b.a.a.a.b #14	ENSGT00940000162415 #15	ENSGT00940000161967 #16	ENSGT00950000182755.b.a.a.a.a.b #17	ENSGT00940000159380 #18	ENSGT00950000182843.b #19	ENSGT00940000154494.a #20	ENSGT00940000159618 #21	ENSGT00940000160510 #22	ENSGT00950000183080.a.b.a.b.b #23	ENSGT00390000005590 #24	ENSGT00390000010309 #25	ENSGT00940000155815 #26	ENSGT01090000260005.a.a.a.b.a.a.a #27	ENSGT00390000006465 #28	ENSGT00940000154756.A #29	ENSGT00940000160371 #30	ENSGT00940000162155 #31	ENSGT01100000263514.A.e.b	ENSGT00940000153092.a.a.c.b #32	ENSGT01100000263474.a.b.b.e.b.a.a ##33	ENSGT01100000263474.a.b.b.e.b.a.b #33	ENSGT00390000009510	ENSGT00940000163997 #35
Northern American deer mouse	MODERN SPECIES	21	Nt5m (ENSPEMG00000018986) #7	Cops3 (ENSPEMG00000019212) #8	Flcn (ENSPEMG00000001290) #9	Pld6 (ENSPEMG00000002262) #10	Mprip (ENSPEMG00000005808) #11	ENSPEMG00000027834 ##12	Or2b11 (ENSPEMG00000027692) #14	Nlrp3 (ENSPEMG00000018349) #15	Zkscan17 (ENSPEMG00000028678) #16	Zfp867 (ENSPEMG00000015201) #17	Jmjd4 (ENSPEMG00000025158) #18	Snap47 (ENSPEMG00000003186) #19	Prss38 (ENSPEMG00000000315) #20	ENSPEMG00000026476	Wnt9a (ENSPEMG00000008917) #21	Wnt3a (ENSPEMG00000014970) #22	Arf1 (ENSPEMG00000024884) #23	2310033P09Rik (ENSPEMG00000016726) #24	Mrpl55 (ENSPEMG00000010381) #25	Guk1 (ENSPEMG00000007733) #26	Gjc2 (ENSPEMG00000015748) #27	Iba57 (ENSPEMG00000029448) #28	Obscn (ENSPEMG00000017360) #29	Trim11 (ENSPEMG00000013300) #30	Trim17 (ENSPEMG00000012957) #31	H3f4 (ENSPEMG00000028465)	H2ac25 (ENSPEMG00000025825) #32	H2bc26-ps (ENSPEMG00000029564) ##33	H2bc27 (ENSPEMG00000029370) #33	ENSPEMG00000024885	Btnl10 (ENSPEMG00000010544) #35
Prairie vole	MODERN SPECIES	15	ENSMOCG00000021960	Pld6 (ENSMOCG00000014600) #10	ENSMOCG00000020749 #11	ENSMOCG00000002772	Or2w25 (ENSMOCG00000002703) #12	Or2b11 (ENSMOCG00000002219) #14	Nlrp3 (ENSMOCG00000022962) #15	ENSMOCG00000004021	ENSMOCG00000007500	Zkscan17 (ENSMOCG00000021773) #16	Zfp867 (ENSMOCG00000017475) #17	Jmjd4 (ENSMOCG00000019517) #18	Snap47 (ENSMOCG00000021698) #19	Prss38 (ENSMOCG00000020492) #20	Wnt9a (ENSMOCG00000022972) #21	Wnt3a (ENSMOCG00000022805) #22	Arf1 (ENSMOCG00000005344) #23	2310033P09Rik (ENSMOCG00000020633) #24	Mrpl55 (ENSMOCG00000022355) #25	Guk1 (ENSMOCG00000020868) #26	Gjc2 (ENSMOCG00000015445) #27	Iba57 (ENSMOCG00000019048) #28	Obscn (ENSMOCG00000009245) #29	Trim11 (ENSMOCG00000021941) #30	Trim17 (ENSMOCG00000016644) #31	H3f4 (ENSMOCG00000002973)	H2ac25 (ENSMOCG00000002942) #32	H2bc26-ps (ENSMOCG00000003080) ##33	H2bc27 (ENSMOCG00000002061) #33	Rnf187 (ENSMOCG00000021645) #34	Btnl10 (ENSMOCG00000005486) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	361							ENSNGAG00000023903	Or2b11 (ENSNGAG00000011866) #14	Nlrp3 (ENSNGAG00000013972) #15	Zkscan17 (ENSNGAG00000021846) #16	Zfp867 (ENSNGAG00000020914) #17	Jmjd4 (ENSNGAG00000023540) #18	Snap47 (ENSNGAG00000021482) #19	Prss38 (ENSNGAG00000012956) #20	Wnt9a (ENSNGAG00000010691) #21	Wnt3a (ENSNGAG00000018479) #22	Arf1 (ENSNGAG00000015070) #23	2310033P09Rik (ENSNGAG00000016568) #24	Mrpl55 (ENSNGAG00000023889) #25
Lesser Egyptian jerboa	MODERN SPECIES	63	Or2y1e (ENSJJAG00000004331) ##12	ENSJJAG00000004545 ##12	ENSJJAG00000005004 ##12	ENSJJAG00000004303 ##12	ENSJJAG00000019586 ##12	ENSJJAG00000020201 ##12	Or2aa1 (ENSJJAG00000021579) #13	Or2b11 (ENSJJAG00000004515) #14	Nlrp3 (ENSJJAG00000007323) #15	Zkscan17 (ENSJJAG00000022828) #16	Zfp867 (ENSJJAG00000008459) #17	Jmjd4 (ENSJJAG00000012776) #18	Snap47 (ENSJJAG00000023009) #19	Prss38 (ENSJJAG00000022512) #20	Wnt9a (ENSJJAG00000020971) #21	Wnt3a (ENSJJAG00000020598) #22	ENSJJAG00000020245 #23	2310033P09Rik (ENSJJAG00000001888) #24	Mrpl55 (ENSJJAG00000021164) #25	Guk1 (ENSJJAG00000021658) #26	Gjc2 (ENSJJAG00000011405) #27	Iba57 (ENSJJAG00000023432) #28	Obscn (ENSJJAG00000023196) #29	Trim11 (ENSJJAG00000019654) #30	Trim17 (ENSJJAG00000017850) #31	ENSJJAG00000017460	H2ac25 (ENSJJAG00000004184) #32	H2bc26-ps (ENSJJAG00000003959) ##33	ENSJJAG00000011864	Btnl10 (ENSJJAG00000023413) #35	Zfp39 (ENSJJAG00000018925) #36
Kangaroo rat	MODERN SPECIES	709																ENSDORG00000003770 #22