Amniota	ANCESTRAL SPECIES	4	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Theria	ANCESTRAL SPECIES	11	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01070000254624	ENSGT01030000234969	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Eutheria	ANCESTRAL SPECIES	20	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Boreoeutheria	ANCESTRAL SPECIES	22	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Glires	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Rodentia	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Guinea pig	MODERN SPECIES	14	C18orf32 (ENSCPOG00000034745) #7	ENSCPOG00000019337 #8	LIPG (ENSCPOG00000008890) #9	ACAA2 (ENSCPOG00000004734) #10	MYO5B (ENSCPOG00000014213) #11	CFAP53 (ENSCPOG00000001668) #12	MBD1 (ENSCPOG00000001671) #13	CXXC1 (ENSCPOG00000020250) #14	SKA1 (ENSCPOG00000013281) #15	MAPK4 (ENSCPOG00000010565) #16	MRO (ENSCPOG00000005618) #17	ME2 (ENSCPOG00000012583) #18	ELAC1 (ENSCPOG00000012588) #19	SMAD4 (ENSCPOG00000006470) #20	MEX3C (ENSCPOG00000009646) #21	DCC (ENSCPOG00000002018) #22	MBD2 (ENSCPOG00000006832) #23	POLI (ENSCPOG00000037626) #24	STARD6 (ENSCPOG00000040582) #25	RAB27B (ENSCPOG00000034520) #26	CCDC68 (ENSCPOG00000003569) #27	TCF4 (ENSCPOG00000005267) #28	ENSCPOG00000008145 #29	TXNL1 (ENSCPOG00000032075) #30	WDR7 (ENSCPOG00000008220) #31	ST8SIA3 (ENSCPOG00000021002) #32	ONECUT2 (ENSCPOG00000000055) #33	FECH (ENSCPOG00000013224) #34	ENSCPOG00000040580 #35	ENSCPOG00000013227 #36	ATP8B1 (ENSCPOG00000006375) #37
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Long-tailed chinchilla	MODERN SPECIES	109	ENSCLAG00000008597	ACAA2 (ENSCLAG00000008998) #10	MYO5B (ENSCLAG00000013994) #11	ENSCLAG00000008426	MBD1 (ENSCLAG00000007457) #13	CXXC1 (ENSCLAG00000010473) #14	SKA1 (ENSCLAG00000009485) #15	MAPK4 (ENSCLAG00000007282) #16	ENSCLAG00000007082	MRO (ENSCLAG00000007658) #17	ENSCLAG00000007635 #18	ELAC1 (ENSCLAG00000008334) #19	SMAD4 (ENSCLAG00000009301) #20	MEX3C (ENSCLAG00000006969) #21	ENSCLAG00000007427	DCC (ENSCLAG00000008360) #22	ENSCLAG00000017775	MBD2 (ENSCLAG00000010471) #23	POLI (ENSCLAG00000015942) #24	STARD6 (ENSCLAG00000015966) #25	C18orf54 (ENSCLAG00000016460)	ENSCLAG00000007044	RAB27B (ENSCLAG00000007524) #26	CCDC68 (ENSCLAG00000008020) #27	TCF4 (ENSCLAG00000008071) #28	TXNL1 (ENSCLAG00000009681) #30	WDR7 (ENSCLAG00000014269) #31	ST8SIA3 (ENSCLAG00000013101) #32	ONECUT2 (ENSCLAG00000011237) #33	FECH (ENSCLAG00000012523) #34	NARS1 (ENSCLAG00000009270) #35
Degu	MODERN SPECIES	44	LIPG (ENSODEG00000018437) #9	ENSODEG00000018376 #10	MYO5B (ENSODEG00000018483) #11	ENSODEG00000018463	MBD1 (ENSODEG00000018451) #13	CXXC1 (ENSODEG00000018469) #14	ENSODEG00000018389	ENSODEG00000018396	ENSODEG00000018450 #16	MRO (ENSODEG00000018415) #17	ME2 (ENSODEG00000018322) #18	ELAC1 (ENSODEG00000018368) #19	SMAD4 (ENSODEG00000018472) #20	MEX3C (ENSODEG00000018398) #21	ENSODEG00000018425	DCC (ENSODEG00000018488) #22	ENSODEG00000018471	ENSODEG00000018470	MBD2 (ENSODEG00000018422) #23	ENSODEG00000018399	STARD6 (ENSODEG00000018474) #25	C18orf54 (ENSODEG00000018408)	ENSODEG00000018409	RAB27B (ENSODEG00000018439) #26	CCDC68 (ENSODEG00000018403) #27	TCF4 (ENSODEG00000018490) #28	TXNL1 (ENSODEG00000018479) #30	WDR7 (ENSODEG00000018485) #31	ST8SIA3 (ENSODEG00000018358) #32	ONECUT2 (ENSODEG00000018371) #33	FECH (ENSODEG00000018475) #34
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000000916	ENSHGLG00000032259	ENSHGLG00000004481 #11	ENSHGLG00000006732	ENSHGLG00000007419	MBD1 (ENSHGLG00000008740) #13	SKA1 (ENSHGLG00000012193) #15	ENSHGLG00000042086 #16	ENSHGLG00000015531	MRO (ENSHGLG00000014593) #17	ENSHGLG00000008828 #18	ELAC1 (ENSHGLG00000033818) #19	SMAD4 (ENSHGLG00000005758) #20	ENSHGLG00000045506	MEX3C (ENSHGLG00000004567) #21	DCC (ENSHGLG00000005265) #22	ENSHGLG00000033712	MBD2 (ENSHGLG00000039782) #23	ENSHGLG00000008868 #24	ENSHGLG00000004780	ENSHGLG00000045151 #25	ENSHGLG00000048044	ENSHGLG00000037393	ENSHGLG00000008021 #10	ENSHGLG00000038847	ENSHGLG00000006292	LIPG (ENSHGLG00000010224) #9	ENSHGLG00000047452 ##8	ENSHGLG00000036153 ##8	ENSHGLG00000009081 #7	ENSHGLG00000015030
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Marmotini	ANCESTRAL SPECIES	31	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788.c #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Marmotini_b	ANCESTRAL SPECIES	80	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788.c #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E.z.b #35
Squirrel	MODERN SPECIES	97	C18orf32 (ENSSTOG00000024071) #7	ENSSTOG00000005193 #8	LIPG (ENSSTOG00000016012) #9	ACAA2 (ENSSTOG00000020792) #10	MYO5B (ENSSTOG00000019663) #11	CFAP53 (ENSSTOG00000007769) #12	MBD1 (ENSSTOG00000007780) #13	CXXC1 (ENSSTOG00000029092) #14	SKA1 (ENSSTOG00000003367) #15	MAPK4 (ENSSTOG00000022822) #16	MRO (ENSSTOG00000009940) #17	ME2 (ENSSTOG00000027218) #18	ELAC1 (ENSSTOG00000010591) #19	SMAD4 (ENSSTOG00000028580) #20	MEX3C (ENSSTOG00000022325) #21	DCC (ENSSTOG00000003557) #22	MBD2 (ENSSTOG00000011253) #23	POLI (ENSSTOG00000004392) #24	STARD6 (ENSSTOG00000004409) #25	C18orf54 (ENSSTOG00000010907)	ENSSTOG00000032190	RAB27B (ENSSTOG00000003409) #26	CCDC68 (ENSSTOG00000003417) #27	TCF4 (ENSSTOG00000005134) #28	TXNL1 (ENSSTOG00000000075) #30	WDR7 (ENSSTOG00000012129) #31	ST8SIA3 (ENSSTOG00000012260) #32	ONECUT2 (ENSSTOG00000020775) #33	FECH (ENSSTOG00000002138) #34	NARS1 (ENSSTOG00000002118) #35	ATP8B1 (ENSSTOG00000003397) #37
Alpin marmot	MODERN SPECIES	10	C18orf32 (ENSMMMG00000006157) #7	ENSMMMG00000006135 #8	LIPG (ENSMMMG00000006111) #9	ACAA2 (ENSMMMG00000006091) #10	MYO5B (ENSMMMG00000005915) #11	CFAP53 (ENSMMMG00000005890) #12	MBD1 (ENSMMMG00000005802) #13	CXXC1 (ENSMMMG00000005766) #14	SKA1 (ENSMMMG00000005747) #15	MAPK4 (ENSMMMG00000005718) #16	MRO (ENSMMMG00000005705) #17	ME2 (ENSMMMG00000005680) #18	ELAC1 (ENSMMMG00000005660) #19	SMAD4 (ENSMMMG00000005628) #20	MEX3C (ENSMMMG00000005613) #21	DCC (ENSMMMG00000005526) #22	ENSMMMG00000005475	MBD2 (ENSMMMG00000005285) #23	POLI (ENSMMMG00000005242) #24	STARD6 (ENSMMMG00000005217) #25	C18orf54 (ENSMMMG00000005170)	ENSMMMG00000005165	RAB27B (ENSMMMG00000005138) #26	CCDC68 (ENSMMMG00000005084) #27	TCF4 (ENSMMMG00000004681) #28	ENSMMMG00000004624	TXNL1 (ENSMMMG00000004568) #30	WDR7 (ENSMMMG00000004539) #31	ST8SIA3 (ENSMMMG00000004494) #32	ONECUT2 (ENSMMMG00000004476) #33	FECH (ENSMMMG00000004463) #34
Eurasian red squirrel	MODERN SPECIES	4	ENSSVLG00005020326 #7	ENSSVLG00005020364 #8	LIPG (ENSSVLG00005020493) #9	ACAA2 (ENSSVLG00005020577) #10	MYO5B (ENSSVLG00005020740) #11	CFAP53 (ENSSVLG00005021141) #12	ENSSVLG00005021347 #13	CXXC1 (ENSSVLG00005021998) #14	SKA1 (ENSSVLG00005022508) #15	MAPK4 (ENSSVLG00005022625) #16	MRO (ENSSVLG00005022669) #17	ENSSVLG00005022892 #18	ELAC1 (ENSSVLG00005023532) #19	SMAD4 (ENSSVLG00005023577) #20	ENSSVLG00005023623 #21	DCC (ENSSVLG00005023748) #22	ENSSVLG00005024226	MBD2 (ENSSVLG00005024263) #23	POLI (ENSSVLG00005024347) #24	STARD6 (ENSSVLG00005024449) #25	ENSSVLG00005024483	ENSSVLG00005024579	RAB27B (ENSSVLG00005024625) #26	CCDC68 (ENSSVLG00005024659) #27	TCF4 (ENSSVLG00005024848) #28	ENSSVLG00005024898	TXNL1 (ENSSVLG00005024925) #30	WDR7 (ENSSVLG00005025038) #31	ST8SIA3 (ENSSVLG00005025139) #32	ENSSVLG00005025154	ONECUT2 (ENSSVLG00005025166) #33
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Myomorpha	ANCESTRAL SPECIES	35	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Muroidea	ANCESTRAL SPECIES	13	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A
Northern American deer mouse	MODERN SPECIES	10	ENSPEMG00000028900	ENSPEMG00000025726	Acaa2 (ENSPEMG00000022034) #10	Myo5b (ENSPEMG00000020539) #11	Cfap53 (ENSPEMG00000024092)	Mbd1 (ENSPEMG00000022630) #13	Cxxc1 (ENSPEMG00000022532) #14	Ska1 (ENSPEMG00000021084) #15	Mapk4 (ENSPEMG00000023783) #16	Mro (ENSPEMG00000022802) #17	Me2 (ENSPEMG00000031101) #18	Elac1 (ENSPEMG00000002394) #19	Smad4 (ENSPEMG00000013699) #20	ENSPEMG00000022227 #21	ENSPEMG00000003058	Dcc (ENSPEMG00000020947) #22	Mbd2 (ENSPEMG00000020730) #23	Poli (ENSPEMG00000016273) #24	Stard6 (ENSPEMG00000020516) #25	ENSPEMG00000030755	4930503L19Rik (ENSPEMG00000011941)	Dynap (ENSPEMG00000020998)	Rab27b (ENSPEMG00000028957) #26	Ccdc68 (ENSPEMG00000021062) #27	Tcf4 (ENSPEMG00000013345) #28	Mc2r (ENSPEMG00000030436)	Mc5r (ENSPEMG00000027856)	Rnmt (ENSPEMG00000022773)	Fam210a (ENSPEMG00000020500)	Ldlrad4 (ENSPEMG00000009004)	Cep192 (ENSPEMG00000022380)
Prairie vole	MODERN SPECIES	5	BC031181 (ENSMOCG00000012446) #7	Rpl17 (ENSMOCG00000012741) #8	Lipg (ENSMOCG00000020738) #9	Acaa2 (ENSMOCG00000004236) #10	Myo5b (ENSMOCG00000022368) #11	ENSMOCG00000008152	ENSMOCG00000011976 #13	Cxxc1 (ENSMOCG00000018819) #14	Ska1 (ENSMOCG00000000860) #15	Mapk4 (ENSMOCG00000017622) #16	Mro (ENSMOCG00000001134) #17	ENSMOCG00000019370 #18	Elac1 (ENSMOCG00000013625) #19	Smad4 (ENSMOCG00000014880) #20	Mex3c (ENSMOCG00000012424) #21	Dcc (ENSMOCG00000002873) #22	ENSMOCG00000002868	Mbd2 (ENSMOCG00000016997) #23	Poli (ENSMOCG00000018932) #24	Stard6 (ENSMOCG00000022986) #25	ENSMOCG00000013893	Dynap (ENSMOCG00000013696)	Rab27b (ENSMOCG00000017027) #26	Ccdc68 (ENSMOCG00000021806) #27	ENSMOCG00000016473 #28	Mc2r (ENSMOCG00000002000)	Mc5r (ENSMOCG00000014761)	Rnmt (ENSMOCG00000011156)	Fam210a (ENSMOCG00000020914)	Ldlrad4 (ENSMOCG00000016058)	Cep192 (ENSMOCG00000018904)
Cricetinae	ANCESTRAL SPECIES	14	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A
Chinese hamster chok1gshd	MODERN SPECIES	153	BC031181 (ENSCGRG00001018350) #7	Rpl17 (ENSCGRG00001020137) #8	Lipg (ENSCGRG00001017705) #9	Acaa2 (ENSCGRG00001003556) #10	Myo5b (ENSCGRG00001023182) #11	ENSCGRG00001020552	Mbd1 (ENSCGRG00001014843) #13	Cxxc1 (ENSCGRG00001024166) #14	Ska1 (ENSCGRG00001004278) #15	Mapk4 (ENSCGRG00001013070) #16	Mro (ENSCGRG00001020055) #17	Me2 (ENSCGRG00001023816) #18	Elac1 (ENSCGRG00001008766) #19	Smad4 (ENSCGRG00001022246) #20	Mex3c (ENSCGRG00001014162) #21	Dcc (ENSCGRG00001019199) #22	ENSCGRG00001004249	Mbd2 (ENSCGRG00001017384) #23	Poli (ENSCGRG00001024509) #24	4930503L19Rik (ENSCGRG00001010669)	Dynap (ENSCGRG00001023476)	Rab27b (ENSCGRG00001006027) #26	Ccdc68 (ENSCGRG00001016970) #27	Tcf4 (ENSCGRG00001010425) #28	Mc2r (ENSCGRG00001008067)	Mc5r (ENSCGRG00001008528)	Rnmt (ENSCGRG00001024115)	Fam210a (ENSCGRG00001013093)	Ldlrad4 (ENSCGRG00001021830)	Cep192 (ENSCGRG00001007358)	ENSCGRG00001002019
Golden Hamster	MODERN SPECIES	665												Mro (ENSMAUG00000012639) #17	ENSMAUG00000008737 #18	Smad4 (ENSMAUG00000009716) #20	Mex3c (ENSMAUG00000016546) #21	Dcc (ENSMAUG00000009021) #22	ENSMAUG00000011525	Mbd2 (ENSMAUG00000013342) #23	Poli (ENSMAUG00000012508) #24	ENSMAUG00000009525 #25	4930503L19Rik (ENSMAUG00000000703)	Dynap (ENSMAUG00000000151)	Rab27b (ENSMAUG00000012806) #26	Ccdc68 (ENSMAUG00000016227) #27	Tcf4 (ENSMAUG00000015171) #28	Mc2r (ENSMAUG00000016719)	Mc5r (ENSMAUG00000013259)	Rnmt (ENSMAUG00000000955)	Fam210a (ENSMAUG00000009871)	Ldlrad4 (ENSMAUG00000005521)	ENSMAUG00000017918
Murinae	ANCESTRAL SPECIES	17	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00940000168426	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187
Mus	ANCESTRAL SPECIES	19	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00940000168426	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00860000135602	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A
Mus_A	ANCESTRAL SPECIES	19	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00940000168426	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00860000135602	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A
Mus_B	ANCESTRAL SPECIES	19	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00940000168426	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00860000135602	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187	ENSGT00940000153393.A
Mouse	MODERN SPECIES	9	BC031181 (ENSMUSG00000036299) #7	Rpl17 (ENSMUSG00000062328) #8	Lipg (ENSMUSG00000053846) #9	Acaa2 (ENSMUSG00000036880) #10	Myo5b (ENSMUSG00000025885) #11	Cfap53 (ENSMUSG00000035394)	Mbd1 (ENSMUSG00000024561) #13	Cxxc1 (ENSMUSG00000024560) #14	Ska1 (ENSMUSG00000036223) #15	Mapk4 (ENSMUSG00000024558) #16	Mro (ENSMUSG00000064036) #17	Me2 (ENSMUSG00000024556) #18	Elac1 (ENSMUSG00000036941) #19	Smad4 (ENSMUSG00000024515) #20	Mex3c (ENSMUSG00000037253) #21	Dcc (ENSMUSG00000060534) #22	Mbd2 (ENSMUSG00000024513) #23	Poli (ENSMUSG00000038425) #24	Stard6 (ENSMUSG00000079608) #25	4930503L19Rik (ENSMUSG00000044906)	Dynap (ENSMUSG00000024512)	Rab27b (ENSMUSG00000024511) #26	Ccdc68 (ENSMUSG00000038903) #27	Tcf4 (ENSMUSG00000053477) #28	Mc2r (ENSMUSG00000045569)	Mc5r (ENSMUSG00000007480)	Rnmt (ENSMUSG00000009535)	Fam210a (ENSMUSG00000038121)	Ldlrad4 (ENSMUSG00000024544)	Cep192 (ENSMUSG00000024542)	Seh1l (ENSMUSG00000079614)
Mus_C	ANCESTRAL SPECIES	16	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00860000135602	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00860000135959	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368	ENSGT00940000156554	ENSGT00390000000724.c.b	ENSGT00510000048187
spretus	MODERN SPECIES	9	MGP_SPRETEiJ_G0023317 ##8	Lipg (MGP_SPRETEiJ_G0023316) #9	Acaa2 (MGP_SPRETEiJ_G0023315) #10	Myo5b (MGP_SPRETEiJ_G0023314) #11	Cfap53 (MGP_SPRETEiJ_G0023313)	Cxxc1 (MGP_SPRETEiJ_G0023312) #14	Ska1 (MGP_SPRETEiJ_G0023311) #15	MGP_SPRETEiJ_G0023310	Mapk4 (MGP_SPRETEiJ_G0023309) #16	Mro (MGP_SPRETEiJ_G0023308) #17	Me2 (MGP_SPRETEiJ_G0023307) #18	Elac1 (MGP_SPRETEiJ_G0023306) #19	Smad4 (MGP_SPRETEiJ_G0023305) #20	Mbd1 (MGP_SPRETEiJ_G0023304) #13	Mex3c (MGP_SPRETEiJ_G0023303) #21	Dcc (MGP_SPRETEiJ_G0023302) #22	Mbd2 (MGP_SPRETEiJ_G0023301) #23	Poli (MGP_SPRETEiJ_G0023300) #24	Stard6 (MGP_SPRETEiJ_G0023299) #25	4930503L19Rik (MGP_SPRETEiJ_G0023298)	Dynap (MGP_SPRETEiJ_G0023297)	Rab27b (MGP_SPRETEiJ_G0023296) #26	Ccdc68 (MGP_SPRETEiJ_G0023295) #27	Tcf4 (MGP_SPRETEiJ_G0023294) #28	MGP_SPRETEiJ_G0023293	Mc2r (MGP_SPRETEiJ_G0023292)	Mc5r (MGP_SPRETEiJ_G0023291)	Rnmt (MGP_SPRETEiJ_G0023290)	Fam210a (MGP_SPRETEiJ_G0023289)	Ldlrad4 (MGP_SPRETEiJ_G0023288)	Cep192 (MGP_SPRETEiJ_G0023287)
Steppe mouse	MODERN SPECIES	2981																ENSMSIG00000011963 #22	ENSMSIG00000011941 #23	Poli (ENSMSIG00000011896) #24	Stard6 (ENSMSIG00000011882) #25	4930503L19Rik (ENSMSIG00000011796)	ENSMSIG00000011794
Ryukyu mouse	MODERN SPECIES	9	BC031181 (MGP_CAROLIEiJ_G0022405) #7	Rpl17 (MGP_CAROLIEiJ_G0022404) #8	Lipg (MGP_CAROLIEiJ_G0022403) #9	Acaa2 (MGP_CAROLIEiJ_G0022402) #10	Myo5b (MGP_CAROLIEiJ_G0022401) #11	Cfap53 (MGP_CAROLIEiJ_G0022400)	Cxxc1 (MGP_CAROLIEiJ_G0022399) #14	Ska1 (MGP_CAROLIEiJ_G0022398) #15	MGP_CAROLIEiJ_G0022397	Mapk4 (MGP_CAROLIEiJ_G0022396) #16	Mro (MGP_CAROLIEiJ_G0022395) #17	Me2 (MGP_CAROLIEiJ_G0022394) #18	Elac1 (MGP_CAROLIEiJ_G0022393) #19	Smad4 (MGP_CAROLIEiJ_G0022392) #20	Mex3c (MGP_CAROLIEiJ_G0022391) #21	Dcc (MGP_CAROLIEiJ_G0022390) #22	Mbd2 (MGP_CAROLIEiJ_G0022389) #23	Poli (MGP_CAROLIEiJ_G0022388) #24	Stard6 (MGP_CAROLIEiJ_G0022387) #25	4930503L19Rik (MGP_CAROLIEiJ_G0022386)	Dynap (MGP_CAROLIEiJ_G0022385)	Rab27b (MGP_CAROLIEiJ_G0022384) #26	Ccdc68 (MGP_CAROLIEiJ_G0022383) #27	Tcf4 (MGP_CAROLIEiJ_G0022382) #28	MGP_CAROLIEiJ_G0022381	Mc2r (MGP_CAROLIEiJ_G0022380)	Mc5r (MGP_CAROLIEiJ_G0022379)	Rnmt (MGP_CAROLIEiJ_G0022378)	Fam210a (MGP_CAROLIEiJ_G0022377)	Ldlrad4 (MGP_CAROLIEiJ_G0022376)	Cep192 (MGP_CAROLIEiJ_G0022375)
Shrew mouse	MODERN SPECIES	6	Rpl17 (MGP_PahariEiJ_G0019133) #8	Lipg (MGP_PahariEiJ_G0019132) #9	Acaa2 (MGP_PahariEiJ_G0019131) #10	Myo5b (MGP_PahariEiJ_G0019130) #11	Cfap53 (MGP_PahariEiJ_G0019129)	MGP_PahariEiJ_G0019128 #13	Cxxc1 (MGP_PahariEiJ_G0019127) #14	Ska1 (MGP_PahariEiJ_G0019126) #15	MGP_PahariEiJ_G0019125	Mapk4 (MGP_PahariEiJ_G0019124) #16	MGP_PahariEiJ_G0019123 #17	Me2 (MGP_PahariEiJ_G0019122) #18	Elac1 (MGP_PahariEiJ_G0019121) #19	Smad4 (MGP_PahariEiJ_G0019120) #20	Mex3c (MGP_PahariEiJ_G0019119) #21	Dcc (MGP_PahariEiJ_G0019118) #22	Mbd2 (MGP_PahariEiJ_G0019117) #23	Poli (MGP_PahariEiJ_G0019116) #24	Stard6 (MGP_PahariEiJ_G0019115) #25	4930503L19Rik (MGP_PahariEiJ_G0019114)	Dynap (MGP_PahariEiJ_G0019113)	Rab27b (MGP_PahariEiJ_G0019112) #26	Ccdc68 (MGP_PahariEiJ_G0019111) #27	Tcf4 (MGP_PahariEiJ_G0019110) #28	Mc2r (MGP_PahariEiJ_G0019109)	Mc5r (MGP_PahariEiJ_G0019108)	Rnmt (MGP_PahariEiJ_G0019107)	Fam210a (MGP_PahariEiJ_G0019106)	Ldlrad4 (MGP_PahariEiJ_G0019105)	Cep192 (MGP_PahariEiJ_G0019104)	Seh1l (MGP_PahariEiJ_G0019103)
Rat	MODERN SPECIES	9	Lipg (ENSRNOG00000018694) #9	Acaa2 (ENSRNOG00000013766) #10	Myo5b (ENSRNOG00000014104) #11	Mbd1 (ENSRNOG00000024104) #13	Cfap53 (ENSRNOG00000014585)	Cxxc1 (ENSRNOG00000014614) #14	Ska1 (ENSRNOG00000015275) #15	Mapk4 (ENSRNOG00000015401) #16	Mro (ENSRNOG00000024426) #17	LOC680512 (ENSRNOG00000033808)	Me2 (ENSRNOG00000015582) #18	Elac1 (ENSRNOG00000000113) #19	Smad4 (ENSRNOG00000051965) #20	Mex3c (ENSRNOG00000015777) #21	AABR07032457.1 (ENSRNOG00000015806)	Dcc (ENSRNOG00000033099) #22	ENSRNOG00000063041	AABR07032453.1 (ENSRNOG00000038592)	Mbd2 (ENSRNOG00000011853) #23	Poli (ENSRNOG00000012111) #24	Stard6 (ENSRNOG00000026324) #25	LOC361346 (ENSRNOG00000028677)	Dynap (ENSRNOG00000063474)	Dynapl1 (ENSRNOG00000028712)	Rab27b (ENSRNOG00000012176) #26	Ccdc68 (ENSRNOG00000021381) #27	Tcf4 (ENSRNOG00000012405) #28	Mc2r (ENSRNOG00000016681)	Mc5r (ENSRNOG00000016685)	Rnmt (ENSRNOG00000016698)	Fam210a (ENSRNOG00000068859)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1812																Dcc (ENSNGAG00000014870) #22
Lesser Egyptian jerboa	MODERN SPECIES	143									ENSJJAG00000010768 #18	Elac1 (ENSJJAG00000010672) #19	Smad4 (ENSJJAG00000008893) #20	Mex3c (ENSJJAG00000005241) #21	ENSJJAG00000001355	ENSJJAG00000000847	ENSJJAG00000013702	Dcc (ENSJJAG00000005791) #22	ENSJJAG00000022704	Vmn2r118 (ENSJJAG00000007013)	ENSJJAG00000022934	ENSJJAG00000022536	ENSJJAG00000010074	ENSJJAG00000009767	ENSJJAG00000009435	Acp5 (ENSJJAG00000002644)	Elof1 (ENSJJAG00000001405)	Cnn1 (ENSJJAG00000001001)	ENSJJAG00000000325	Zfp653 (ENSJJAG00000000128)	Elavl3 (ENSJJAG00000023513)	Prkcsh (ENSJJAG00000021556)	ENSJJAG00000020511
Kangaroo rat	MODERN SPECIES	362	ENSDORG00000026216 ##8	Lipg (ENSDORG00000015147) #9	Acaa2 (ENSDORG00000012365) #10	Myo5b (ENSDORG00000013047) #11	ENSDORG00000013915 #12	Mbd1 (ENSDORG00000013917) #13	Cxxc1 (ENSDORG00000000890) #14	ENSDORG00000013704	ENSDORG00000028529 #16	Mro (ENSDORG00000004230) #17	Me2 (ENSDORG00000010848) #18	ENSDORG00000024602	Elac1 (ENSDORG00000025215) #19	Smad4 (ENSDORG00000009089) #20	Mex3c (ENSDORG00000025473) #21	Dcc (ENSDORG00000001861) #22	Mbd2 (ENSDORG00000029792) #23	Poli (ENSDORG00000015768) #24	ENSDORG00000023494 #25	4930503L19Rik (ENSDORG00000015771)	Rab27b (ENSDORG00000027027) #26	Ccdc68 (ENSDORG00000012696) #27	Tcf4 (ENSDORG00000012697) #28	Txnl1 (ENSDORG00000010462) #30	Wdr7 (ENSDORG00000010463) #31	St8sia3 (ENSDORG00000027411) #32	Onecut2 (ENSDORG00000008672) #33	Fech (ENSDORG00000002794) #34	Nars (ENSDORG00000011542) #35	Atp8b1 (ENSDORG00000011543) #37	Nedd4l (ENSDORG00000016653)
Lagomorpha	ANCESTRAL SPECIES	29	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.a.a.a.b.k ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000265446	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Rabbit	MODERN SPECIES	20	LIPG (ENSOCUG00000013471) #9	ACAA2 (ENSOCUG00000016540) #10	MYO5B (ENSOCUG00000009547) #11	ENSOCUG00000037569	ENSOCUG00000017123	MBD1 (ENSOCUG00000006554) #13	CXXC1 (ENSOCUG00000025756) #14	SKA1 (ENSOCUG00000007927) #15	MAPK4 (ENSOCUG00000013016) #16	MRO (ENSOCUG00000007663) #17	ME2 (ENSOCUG00000012433) #18	ELAC1 (ENSOCUG00000009509) #19	SMAD4 (ENSOCUG00000003929) #20	MEX3C (ENSOCUG00000012549) #21	ENSOCUG00000038228	DCC (ENSOCUG00000000384) #22	ENSOCUG00000033920	MBD2 (ENSOCUG00000021080) #23	ENSOCUG00000003746 #24	STARD6 (ENSOCUG00000029013) #25	C18orf54 (ENSOCUG00000015283)	ENSOCUG00000033740	ENSOCUG00000030546	RAB27B (ENSOCUG00000022858) #26	CCDC68 (ENSOCUG00000014516) #27	TCF4 (ENSOCUG00000002669) #28	ENSOCUG00000037878	TXNL1 (ENSOCUG00000002505) #30	WDR7 (ENSOCUG00000002512) #31	ST8SIA3 (ENSOCUG00000011662) #32	ONECUT2 (ENSOCUG00000021525) #33
Pika	MODERN SPECIES	4184																DCC (ENSOPRG00000016770) #22
Tree shrew	MODERN SPECIES	4716																DCC (ENSTBEG00000016912) #22
Primates	ANCESTRAL SPECIES	24	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ##8	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D.k #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Hominidae	ANCESTRAL SPECIES	24	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D.k #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D.k #10	ENSGT00940000155402.a.b.gb #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Gorilla	MODERN SPECIES	9	RPL17 (ENSGGOG00000026697) ##8	LIPG (ENSGGOG00000000595) #9	ACAA2 (ENSGGOG00000012552) #10	MYO5B (ENSGGOG00000008585) #11	MBD1 (ENSGGOG00000016966) #13	CXXC1 (ENSGGOG00000016976) #14	SKA1 (ENSGGOG00000016643) #15	MAPK4 (ENSGGOG00000010469) #16	MRO (ENSGGOG00000027618) #17	ME2 (ENSGGOG00000010823) #18	ELAC1 (ENSGGOG00000002624) #19	SMAD4 (ENSGGOG00000013662) #20	ENSGGOG00000036220	ENSGGOG00000014875 #21	ENSGGOG00000025730	DCC (ENSGGOG00000007343) #22	MBD2 (ENSGGOG00000013402) #23	POLI (ENSGGOG00000014321) #24	STARD6 (ENSGGOG00000007234) #25	ENSGGOG00000028549 #25	C18orf54 (ENSGGOG00000001490)	ENSGGOG00000036639	DYNAP (ENSGGOG00000010826)	RAB27B (ENSGGOG00000015655) #26	CCDC68 (ENSGGOG00000022410) #27	TCF4 (ENSGGOG00000016297) #28	TXNL1 (ENSGGOG00000009301) #30	WDR7 (ENSGGOG00000002885) #31	BOD1L2 (ENSGGOG00000026864)	ST8SIA3 (ENSGGOG00000042477) #32	ENSGGOG00000024651 #33
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D.k #10	ENSGT00940000155402.a.b.gb #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00510000046985.h.a	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117
Human	MODERN SPECIES	9	RPL17-C18orf32 (ENSG00000215472)	RPL17 (ENSG00000265681) ##8	LIPG (ENSG00000101670) #9	ACAA2 (ENSG00000167315) #10	MYO5B (ENSG00000167306) #11	CFAP53 (ENSG00000172361) #12	MBD1 (ENSG00000141644) #13	CXXC1 (ENSG00000154832) #14	SKA1 (ENSG00000154839) #15	MAPK4 (ENSG00000141639) #16	MRO (ENSG00000134042) #17	ME2 (ENSG00000082212) #18	ELAC1 (ENSG00000141642) #19	SMAD4 (ENSG00000141646) #20	MEX3C (ENSG00000176624) #21	DCC (ENSG00000187323) #22	MBD2 (ENSG00000134046) #23	POLI (ENSG00000101751) #24	STARD6 (ENSG00000174448) #25	C18orf54 (ENSG00000166845)	DYNAP (ENSG00000178690)	RAB27B (ENSG00000041353) #26	CCDC68 (ENSG00000166510) #27	TCF4 (ENSG00000196628) #28	TXNL1 (ENSG00000091164) #30	WDR7 (ENSG00000091157) #31	BOD1L2 (ENSG00000228075)	ST8SIA3 (ENSG00000177511) #32	ONECUT2 (ENSG00000119547) #33	FECH (ENSG00000066926) #34	NARS1 (ENSG00000134440) #35
Pan	ANCESTRAL SPECIES	24	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00390000013264.c.a	ENSGT00940000159394 #9	ENSGT01030000234626.D.k #10	ENSGT00940000155402.a.b.gb #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Bonobo	MODERN SPECIES	9	ENSPPAG00000028848 ##8	ENSPPAG00000032490	LIPG (ENSPPAG00000034597) #9	ACAA2 (ENSPPAG00000039219) #10	MYO5B (ENSPPAG00000042788) #11	CFAP53 (ENSPPAG00000035491) #12	MBD1 (ENSPPAG00000038886) #13	CXXC1 (ENSPPAG00000028863) #14	SKA1 (ENSPPAG00000035202) #15	MAPK4 (ENSPPAG00000009556) #16	MRO (ENSPPAG00000039840) #17	ME2 (ENSPPAG00000036244) #18	ELAC1 (ENSPPAG00000036817) #19	SMAD4 (ENSPPAG00000027913) #20	ENSPPAG00000038467 #21	DCC (ENSPPAG00000036460) #22	ENSPPAG00000030303 #23	POLI (ENSPPAG00000033244) #24	STARD6 (ENSPPAG00000029738) #25	C18orf54 (ENSPPAG00000015106)	ENSPPAG00000037542	RAB27B (ENSPPAG00000038458) #26	CCDC68 (ENSPPAG00000027404) #27	ENSPPAG00000036151 #28	TXNL1 (ENSPPAG00000036223) #30	WDR7 (ENSPPAG00000042765) #31	BOD1L2 (ENSPPAG00000041535)	ST8SIA3 (ENSPPAG00000025859) #32	ENSPPAG00000034611 #33	ENSPPAG00000012630	FECH (ENSPPAG00000028098) #34
Chimpanzee	MODERN SPECIES	9	RPL17 (ENSPTRG00000010012) ##8	ENSPTRG00000043609	LIPG (ENSPTRG00000010015) #9	ACAA2 (ENSPTRG00000010016) #10	MYO5B (ENSPTRG00000010019) #11	CFAP53 (ENSPTRG00000010020)	MBD1 (ENSPTRG00000010021) #13	CXXC1 (ENSPTRG00000010022) #14	SKA1 (ENSPTRG00000010023) #15	MAPK4 (ENSPTRG00000010024) #16	MRO (ENSPTRG00000010025) #17	ME2 (ENSPTRG00000010026) #18	ELAC1 (ENSPTRG00000010027) #19	SMAD4 (ENSPTRG00000010028) #20	MEX3C (ENSPTRG00000010029) #21	DCC (ENSPTRG00000010031) #22	MBD2 (ENSPTRG00000010033) #23	POLI (ENSPTRG00000010034) #24	STARD6 (ENSPTRG00000010035) #25	C18H18orf54 (ENSPTRG00000010036)	ENSPTRG00000042762	DYNAP (ENSPTRG00000010037)	RAB27B (ENSPTRG00000010038) #26	CCDC68 (ENSPTRG00000010039) #27	TCF4 (ENSPTRG00000010040) #28	TXNL1 (ENSPTRG00000010041) #30	WDR7 (ENSPTRG00000010042) #31	BOD1L2 (ENSPTRG00000041583)	ST8SIA3 (ENSPTRG00000049302) #32	ONECUT2 (ENSPTRG00000010044) #33	ENSPTRG00000049370
Orangutan	MODERN SPECIES	9	ENSPPYG00000009151 ##8	LIPG (ENSPPYG00000009153) #9	ACAA2 (ENSPPYG00000009154) #10	MYO5B (ENSPPYG00000009155) #11	CFAP53 (ENSPPYG00000009157) #12	MBD1 (ENSPPYG00000009158) #13	CXXC1 (ENSPPYG00000031882) #14	SKA1 (ENSPPYG00000009159) #15	MAPK4 (ENSPPYG00000009161) #16	ENSPPYG00000041514	MRO (ENSPPYG00000030050) #17	ME2 (ENSPPYG00000009163) #18	ELAC1 (ENSPPYG00000029936) #19	SMAD4 (ENSPPYG00000009165) #20	MEX3C (ENSPPYG00000038962) #21	DCC (ENSPPYG00000009166) #22	MBD2 (ENSPPYG00000009168) #23	POLI (ENSPPYG00000009169) #24	STARD6 (ENSPPYG00000009170) #25	C18orf54 (ENSPPYG00000009171)	ENSPPYG00000040268	DYNAP (ENSPPYG00000009172)	RAB27B (ENSPPYG00000009173) #26	CCDC68 (ENSPPYG00000009174) #27	TCF4 (ENSPPYG00000009175) #28	TXNL1 (ENSPPYG00000009178) #30	WDR7 (ENSPPYG00000009179) #31	ENSPPYG00000039176	ST8SIA3 (ENSPPYG00000009180) #32	ONECUT2 (ENSPPYG00000009181) #33	FECH (ENSPPYG00000009182) #34
Gibbon	MODERN SPECIES	19	ENSNLEG00000029836 ##8	ENSNLEG00000034341	LIPG (ENSNLEG00000011556) #9	ACAA2 (ENSNLEG00000011576) #10	MYO5B (ENSNLEG00000011609) #11	CFAP53 (ENSNLEG00000011645) #12	ENSNLEG00000011661 #13	CXXC1 (ENSNLEG00000011746) #14	SKA1 (ENSNLEG00000011804) #15	MAPK4 (ENSNLEG00000011809) #16	ENSNLEG00000011826 #17	ME2 (ENSNLEG00000011833) #18	ELAC1 (ENSNLEG00000011855) #19	SMAD4 (ENSNLEG00000011859) #20	ENSNLEG00000029756 #21	DCC (ENSNLEG00000011879) #22	ENSNLEG00000031955 #23	POLI (ENSNLEG00000011903) #24	STARD6 (ENSNLEG00000011931) #25	DYNAP (ENSNLEG00000007968)	RAB27B (ENSNLEG00000007971) #26	CCDC68 (ENSNLEG00000007972) #27	TCF4 (ENSNLEG00000007981) #28	TXNL1 (ENSNLEG00000008009) #30	WDR7 (ENSNLEG00000008020) #31	BOD1L2 (ENSNLEG00000027541)	ST8SIA3 (ENSNLEG00000030534) #32	ENSNLEG00000008061	ENSNLEG00000031671	FECH (ENSNLEG00000008062) #34	NARS1 (ENSNLEG00000008082) #35
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170.e #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b.a	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT01020000230346.E.s.b.b	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183541	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170.e #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b.a	ENSGT01030000234535.E #32	ENSGT00910000148258	ENSGT00950000183103.d.a.b #33
Macaca	ANCESTRAL SPECIES	22	ENSGT00950000183010.a.a.a.b.a.a.a.a.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT01020000230346.E.s.b.b	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183541	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170.e #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b.a	ENSGT01030000234535.E #32	ENSGT00910000148258	ENSGT00950000183103.d.a.b #33
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00940000155478.r	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00390000004856.w.a.a.b.b.a.b.b.a.b ##29	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183541	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170.e #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Crab-eating macaque	MODERN SPECIES	9	MBD1 (ENSMFAG00000026335) #13	CXXC1 (ENSMFAG00000040503) #14	ENSMFAG00000056437	SKA1 (ENSMFAG00000000025) #15	ENSMFAG00000011076 ##29	ENSMFAG00000036294 #16	MRO (ENSMFAG00000050667) #17	ME2 (ENSMFAG00000004061) #18	ELAC1 (ENSMFAG00000004789) #19	SMAD4 (ENSMFAG00000037003) #20	MEX3C (ENSMFAG00000056117) #21	ENSMFAG00000060015	ENSMFAG00000053354	ENSMFAG00000042123	ENSMFAG00000055405	DCC (ENSMFAG00000033415) #22	ENSMFAG00000063986	ENSMFAG00000059397	ENSMFAG00000051166	ENSMFAG00000062197	MBD2 (ENSMFAG00000030736) #23	POLI (ENSMFAG00000011788) #24	ENSMFAG00000057960	STARD6 (ENSMFAG00000046022) #25	C18orf54 (ENSMFAG00000038588)	DYNAP (ENSMFAG00000034603)	RAB27B (ENSMFAG00000002806) #26	ENSMFAG00000051025	CCDC68 (ENSMFAG00000032372) #27	TCF4 (ENSMFAG00000036909) #28	ENSMFAG00000059413
Rhesus	MODERN SPECIES	9	CXXC1 (ENSMMUG00000009051) #14	ENSMMUG00000049659	SKA1 (ENSMMUG00000000719) #15	ENSMMUG00000063161	MAPK4 (ENSMMUG00000017290) #16	MRO (ENSMMUG00000022472) #17	ME2 (ENSMMUG00000022001) #18	ELAC1 (ENSMMUG00000003127) #19	SMAD4 (ENSMMUG00000018334) #20	MEX3C (ENSMMUG00000023652) #21	ENSMMUG00000055836	ENSMMUG00000050881	ENSMMUG00000051621	ENSMMUG00000004431	ENSMMUG00000054260	DCC (ENSMMUG00000013999) #22	ENSMMUG00000059274	MBD2 (ENSMMUG00000003136) #23	ENSMMUG00000050079	POLI (ENSMMUG00000010911) #24	STARD6 (ENSMMUG00000010913) #25	ENSMMUG00000059012	C18H18orf54 (ENSMMUG00000010914)	ENSMMUG00000061695	ENSMMUG00000056385	DYNAP (ENSMMUG00000013356)	RAB27B (ENSMMUG00000040524) #26	CCDC68 (ENSMMUG00000021598) #27	TCF4 (ENSMMUG00000012001) #28	ENSMMUG00000064753	ENSMMUG00000060128
Pig-tailed macaque	MODERN SPECIES	155	ENSMNEG00000035945 ##8	LIPG (ENSMNEG00000043610) #9	ACAA2 (ENSMNEG00000037789) #10	MYO5B (ENSMNEG00000033529) #11	CFAP53 (ENSMNEG00000015915) #12	MBD1 (ENSMNEG00000038822) #13	CXXC1 (ENSMNEG00000028715) #14	SKA1 (ENSMNEG00000029687) #15	MAPK4 (ENSMNEG00000038618) #16	ENSMNEG00000000269	MRO (ENSMNEG00000033026) #17	ME2 (ENSMNEG00000034912) #18	ELAC1 (ENSMNEG00000034310) #19	SMAD4 (ENSMNEG00000030827) #20	MEX3C (ENSMNEG00000037450) #21	DCC (ENSMNEG00000044541) #22	MBD2 (ENSMNEG00000028536) #23	POLI (ENSMNEG00000041620) #24	STARD6 (ENSMNEG00000034811) #25	C18orf54 (ENSMNEG00000004827)
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183541	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170.e #30	ENSGT00940000155301 #31	ENSGT00940000154979.s.b.a	ENSGT01030000234535.E #32	ENSGT00910000148258	ENSGT00950000183103.d.a.b #33
Cercopithecinae_d	ANCESTRAL SPECIES	40	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT01020000230346.E.s.b.b	ENSGT00390000004856.w.a.a.b.b.a.b.b.a.b ##29	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b.o #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823
Drill	MODERN SPECIES	403																DCC (ENSMLEG00000010190) #22
Sooty mangabey	MODERN SPECIES	190	LIPG (ENSCATG00000033603) #9	ACAA2 (ENSCATG00000031450) #10	MYO5B (ENSCATG00000038137) #11	CFAP53 (ENSCATG00000026928) #12	MBD1 (ENSCATG00000029959) #13	CXXC1 (ENSCATG00000035708) #14	SKA1 (ENSCATG00000039979) #15	ENSCATG00000033940	ENSCATG00000017689 ##29	MAPK4 (ENSCATG00000016401) #16	MRO (ENSCATG00000041212) #17	ME2 (ENSCATG00000034688) #18	ELAC1 (ENSCATG00000036385) #19	SMAD4 (ENSCATG00000041132) #20	MEX3C (ENSCATG00000031557) #21	DCC (ENSCATG00000021673) #22	MBD2 (ENSCATG00000040536) #23	POLI (ENSCATG00000033055) #24	STARD6 (ENSCATG00000031540) #25	C18orf54 (ENSCATG00000032627)
Olive baboon	MODERN SPECIES	10	ENSPANG00000037588	C18orf32 (ENSPANG00000040941) #7	ENSPANG00000031295 ##8	LIPG (ENSPANG00000024235) #9	ACAA2 (ENSPANG00000002878) #10	MYO5B (ENSPANG00000022089) #11	MBD1 (ENSPANG00000010867) #13	CXXC1 (ENSPANG00000009435) #14	SKA1 (ENSPANG00000030336) #15	MAPK4 (ENSPANG00000009483) #16	MRO (ENSPANG00000011894) #17	ME2 (ENSPANG00000016868) #18	ELAC1 (ENSPANG00000026392) #19	SMAD4 (ENSPANG00000024703) #20	MEX3C (ENSPANG00000006226) #21	DCC (ENSPANG00000006451) #22	ENSPANG00000037100	ENSPANG00000045144	ENSPANG00000043603	MBD2 (ENSPANG00000021858) #23	ENSPANG00000051300	POLI (ENSPANG00000006450) #24	STARD6 (ENSPANG00000032987) #25	C18orf54 (ENSPANG00000007505)	DYNAP (ENSPANG00000017680)	RAB27B (ENSPANG00000003498) #26	CCDC68 (ENSPANG00000007435) #27	TCF4 (ENSPANG00000009840) #28	TXNL1 (ENSPANG00000005885) #30	WDR7 (ENSPANG00000006224) #31	ENSPANG00000039328
Vervet Monkey	MODERN SPECIES	9	LIPG (ENSCSAG00000018043) #9	ACAA2 (ENSCSAG00000018054) #10	MYO5B (ENSCSAG00000018060) #11	CFAP53 (ENSCSAG00000018065) #12	MBD1 (ENSCSAG00000018070) #13	CXXC1 (ENSCSAG00000018072) #14	SKA1 (ENSCSAG00000018076) #15	ENSCSAG00000018568 ##29	MAPK4 (ENSCSAG00000018078) #16	MRO (ENSCSAG00000018082) #17	ME2 (ENSCSAG00000018086) #18	ELAC1 (ENSCSAG00000018090) #19	ENSCSAG00000018091	SMAD4 (ENSCSAG00000018094) #20	MEX3C (ENSCSAG00000018097) #21	DCC (ENSCSAG00000018101) #22	MBD2 (ENSCSAG00000018106) #23	POLI (ENSCSAG00000018108) #24	STARD6 (ENSCSAG00000018111) #25	C18orf54 (ENSCSAG00000018117)	DYNAP (ENSCSAG00000018120)	RAB27B (ENSCSAG00000018126) #26	CCDC68 (ENSCSAG00000018134) #27	TCF4 (ENSCSAG00000018141) #28	TXNL1 (ENSCSAG00000018145) #30	WDR7 (ENSCSAG00000018146) #31	BOD1L2 (ENSCSAG00000018567)	ST8SIA3 (ENSCSAG00000018147) #32	ENSCSAG00000018566	ONECUT2 (ENSCSAG00000018149) #33	FECH (ENSCSAG00000018150) #34
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000158867 #22
Black snub-nosed monkey	MODERN SPECIES	1551						RFT1 (ENSRBIG00000009631)	PRKCD (ENSRBIG00000035334)	TKT (ENSRBIG00000031974)	DCP1A (ENSRBIG00000032220)	ENSRBIG00000014675	CACNA1D (ENSRBIG00000034562)	CHDH (ENSRBIG00000019361)	IL17RB (ENSRBIG00000041350)	ACTR8 (ENSRBIG00000037649)	SELENOK (ENSRBIG00000042324)	DCC (ENSRBIG00000038057) #22	ENSRBIG00000030352
Golden snub-nosed monkey	MODERN SPECIES	594																DCC (ENSRROG00000028105) #22
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.c #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000154430.e.a	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301.t #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Cebidae	ANCESTRAL SPECIES	28	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.c #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000154430.e.a	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301.t #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Marmoset	MODERN SPECIES	4	ENSCJAG00000073947	ACAA2 (ENSCJAG00000004820) #10	MYO5B (ENSCJAG00000004857) #11	CFAP53 (ENSCJAG00000004928) #12	MBD1 (ENSCJAG00000004959) #13	ENSCJAG00000005044 #14	SKA1 (ENSCJAG00000084830) #15	ENSCJAG00000086150	MAPK4 (ENSCJAG00000001974) #16	ME2 (ENSCJAG00000001929) #18	MRO (ENSCJAG00000041277) #17	ELAC1 (ENSCJAG00000001925) #19	SMAD4 (ENSCJAG00000001910) #20	MEX3C (ENSCJAG00000072158) #21	ENSCJAG00000084840	DCC (ENSCJAG00000001868) #22	MBD2 (ENSCJAG00000040234) #23	POLI (ENSCJAG00000001851) #24	ENSCJAG00000070038	ENSCJAG00000034626	C18orf54 (ENSCJAG00000001841)	ENSCJAG00000086244	DYNAP (ENSCJAG00000004179)	RAB27B (ENSCJAG00000004175) #26	CCDC68 (ENSCJAG00000004164) #27	ENSCJAG00000086874	TCF4 (ENSCJAG00000004038) #28	TXNL1 (ENSCJAG00000004012) #30	ENSCJAG00000034961	WDR7 (ENSCJAG00000003937) #31	ST8SIA3 (ENSCJAG00000003917) #32
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.c #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000154430.e.a	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301.t #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00910000147117	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Bolivian squirrel monkey	MODERN SPECIES	58	ACAA2 (ENSSBOG00000029056) #10	MYO5B (ENSSBOG00000024887) #11	MBD1 (ENSSBOG00000027169) #13	CXXC1 (ENSSBOG00000020380) #14	ENSSBOG00000029260 #15	MAPK4 (ENSSBOG00000034699) #16	MRO (ENSSBOG00000029231) #17	ENSSBOG00000032219	ME2 (ENSSBOG00000021989) #18	ELAC1 (ENSSBOG00000019881) #19	SMAD4 (ENSSBOG00000029676) #20	MEX3C (ENSSBOG00000024094) #21	ENSSBOG00000025727	ENSSBOG00000017363	ENSSBOG00000032319	DCC (ENSSBOG00000032419) #22	MBD2 (ENSSBOG00000011611) #23	POLI (ENSSBOG00000025500) #24	ENSSBOG00000025779	STARD6 (ENSSBOG00000020117) #25	C18orf54 (ENSSBOG00000026155)	DYNAP (ENSSBOG00000032272)	RAB27B (ENSSBOG00000032536) #26	CCDC68 (ENSSBOG00000036015) #27	TCF4 (ENSSBOG00000021853) #28	TXNL1 (ENSSBOG00000028008) #30	WDR7 (ENSSBOG00000031603) #31	ST8SIA3 (ENSSBOG00000031460) #32	ONECUT2 (ENSSBOG00000031074) #33	ENSSBOG00000029218	FECH (ENSSBOG00000021150) #34
Capuchin	MODERN SPECIES	278																DCC (ENSCCAG00000011712) #22	ENSCCAG00000019812	MBD2 (ENSCCAG00000037922) #23	POLI (ENSCCAG00000037034) #24	ENSCCAG00000025537	STARD6 (ENSCCAG00000020754) #25	C18orf54 (ENSCCAG00000022668)	DYNAP (ENSCCAG00000029558)
Mas night monkey	MODERN SPECIES	714									ENSANAG00000031776	MRO (ENSANAG00000033105) #17	ME2 (ENSANAG00000024499) #18	ELAC1 (ENSANAG00000035626) #19	SMAD4 (ENSANAG00000025293) #20	MEX3C (ENSANAG00000031189) #21	ENSANAG00000020330	DCC (ENSANAG00000025332) #22	MBD2 (ENSANAG00000030070) #23	POLI (ENSANAG00000024794) #24	STARD6 (ENSANAG00000025071) #25	C18orf54 (ENSANAG00000027978)	DYNAP (ENSANAG00000027647)	ENSANAG00000019712	RAB27B (ENSANAG00000025096) #26	CCDC68 (ENSANAG00000025839) #27	TCF4 (ENSANAG00000031962) #28
Tarsier	MODERN SPECIES	3381																DCC (ENSTSYG00000001314) #22
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT00390000018741.s #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00390000018741.s #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.e #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Mouse lemur	MODERN SPECIES	10	ENSMICG00000017102 #8	LIPG (ENSMICG00000017104) #9	ACAA2 (ENSMICG00000005278) #10	MYO5B (ENSMICG00000005287) #11	CFAP53 (ENSMICG00000006410) #12	MBD1 (ENSMICG00000006414) #13	CXXC1 (ENSMICG00000006424) #14	SKA1 (ENSMICG00000006429) #15	MAPK4 (ENSMICG00000015044) #16	MRO (ENSMICG00000008008) #17	ENSMICG00000045071	ENSMICG00000017523 #18	ELAC1 (ENSMICG00000017524) #19	SMAD4 (ENSMICG00000017525) #20	MEX3C (ENSMICG00000005815) #21	DCC (ENSMICG00000003408) #22	MBD2 (ENSMICG00000008970) #23	POLI (ENSMICG00000008976) #24	STARD6 (ENSMICG00000012563) #25	C18orf54 (ENSMICG00000029715)	ENSMICG00000046521	DYNAP (ENSMICG00000015413)	RAB27B (ENSMICG00000015440) #26	CCDC68 (ENSMICG00000015449) #27	TCF4 (ENSMICG00000012305) #28	ENSMICG00000026597	TXNL1 (ENSMICG00000034326) #30	WDR7 (ENSMICG00000017318) #31	ST8SIA3 (ENSMICG00000003063) #32	ONECUT2 (ENSMICG00000003067) #33	FECH (ENSMICG00000003069) #34
Lemuriformes_a	ANCESTRAL SPECIES	62	ENSGT00390000018741.s #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.e #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Greater bamboo lemur	MODERN SPECIES	606	ENSPSMG00000018846 #7	ENSPSMG00000018857 #8	LIPG (ENSPSMG00000018901) #9	ACAA2 (ENSPSMG00000018945) #10	MYO5B (ENSPSMG00000019098) #11	CFAP53 (ENSPSMG00000019120) #12	MBD1 (ENSPSMG00000019377) #13	CXXC1 (ENSPSMG00000019839) #14	SKA1 (ENSPSMG00000019864) #15	MAPK4 (ENSPSMG00000019888) #16	MRO (ENSPSMG00000019937) #17	ME2 (ENSPSMG00000020268) #18	ENSPSMG00000020513	SMAD4 (ENSPSMG00000020569) #20	MEX3C (ENSPSMG00000020603) #21	DCC (ENSPSMG00000020751) #22
Coquerels sifaka	MODERN SPECIES	512						CFAP53 (ENSPCOG00000018350) #12	MBD1 (ENSPCOG00000012450) #13	CXXC1 (ENSPCOG00000019730) #14	ENSPCOG00000014158 #15	MAPK4 (ENSPCOG00000023971) #16	MRO (ENSPCOG00000027267) #17	ME2 (ENSPCOG00000021599) #18	ELAC1 (ENSPCOG00000026213) #19	SMAD4 (ENSPCOG00000024716) #20	MEX3C (ENSPCOG00000027054) #21	ENSPCOG00000026622 #22	MBD2 (ENSPCOG00000013359) #23	POLI (ENSPCOG00000022543) #24	STARD6 (ENSPCOG00000014244) #25	C18orf54 (ENSPCOG00000020877)	DYNAP (ENSPCOG00000026854)	RAB27B (ENSPCOG00000011474) #26	CCDC68 (ENSPCOG00000014000) #27	TCF4 (ENSPCOG00000019229) #28	ENSPCOG00000015466	TXNL1 (ENSPCOG00000014144) #30	WDR7 (ENSPCOG00000024980) #31	ST8SIA3 (ENSPCOG00000016338) #32	ONECUT2 (ENSPCOG00000022214) #33	FECH (ENSPCOG00000017751) #34	NARS1 (ENSPCOG00000020832) #35
Bushbaby	MODERN SPECIES	127	DYM (ENSOGAG00000013935)	ENSOGAG00000029213	LIPG (ENSOGAG00000016524) #9	ACAA2 (ENSOGAG00000016527) #10	MYO5B (ENSOGAG00000016529) #11	ENSOGAG00000003781	MBD1 (ENSOGAG00000003784) #13	CXXC1 (ENSOGAG00000033715) #14	SKA1 (ENSOGAG00000016657) #15	MAPK4 (ENSOGAG00000016663) #16	MRO (ENSOGAG00000016668) #17	ME2 (ENSOGAG00000010482) #18	ELAC1 (ENSOGAG00000012076) #19	SMAD4 (ENSOGAG00000012081) #20	MEX3C (ENSOGAG00000030858) #21	DCC (ENSOGAG00000010546) #22
Laurasiatheria	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158867 #22
Hedgehog	MODERN SPECIES	7874																DCC (ENSEEUG00000012927) #22
Common shrew	MODERN SPECIES	6180																DCC (ENSSARG00000010153) #22
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Suina	ANCESTRAL SPECIES	12	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Chacoan peccary	MODERN SPECIES	122			ENSCWAG00000018521	MYO5B (ENSCWAG00000018457) #11	CFAP53 (ENSCWAG00000018402) #12	MBD1 (ENSCWAG00000018326) #13	CXXC1 (ENSCWAG00000018259) #14	SKA1 (ENSCWAG00000018123) #15	ENSCWAG00000018092 #16	MRO (ENSCWAG00000017997) #17	ME2 (ENSCWAG00000017770) #18	ELAC1 (ENSCWAG00000017700) #19	SMAD4 (ENSCWAG00000017649) #20	MEX3C (ENSCWAG00000017619) #21	ENSCWAG00000017584	DCC (ENSCWAG00000017136) #22	MBD2 (ENSCWAG00000017006) #23	POLI (ENSCWAG00000016867) #24	STARD6 (ENSCWAG00000016804) #25	C18orf54 (ENSCWAG00000016630)	ENSCWAG00000016595	DYNAP (ENSCWAG00000016556)
Pig	MODERN SPECIES		ENSSSCG00000049462	ENSSSCG00000045942	ENSSSCG00000061513	ENSSSCG00000041158	CFAP53 (ENSSSCG00000055973) #12	MBD1 (ENSSSCG00000004516) #13	CXXC1 (ENSSSCG00000004517) #14	SKA1 (ENSSSCG00000004518) #15	ENSSSCG00000004520 #16	MRO (ENSSSCG00000004521) #17	ME2 (ENSSSCG00000004522) #18	ELAC1 (ENSSSCG00000024479) #19	SMAD4 (ENSSSCG00000004524) #20	MEX3C (ENSSSCG00000034427) #21	ENSSSCG00000047971	DCC (ENSSSCG00000040836) #22	ENSSSCG00000043320	MBD2 (ENSSSCG00000004528) #23	POLI (ENSSSCG00000004529) #24	STARD6 (ENSSSCG00000004530) #25	C18orf54 (ENSSSCG00000004531)	ENSSSCG00000038606	DYNAP (ENSSSCG00000042812)	RAB27B (ENSSSCG00000035243) #26	CCDC68 (ENSSSCG00000004534) #27	TCF4 (ENSSSCG00000004535) #28	TXNL1 (ENSSSCG00000004537) #30	WDR7 (ENSSSCG00000004538) #31	ST8SIA3 (ENSSSCG00000038971) #32	ONECUT2 (ENSSSCG00000004540) #33	FECH (ENSSSCG00000004541) #34
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Cetacea	ANCESTRAL SPECIES	11	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190376.b	ENSGT00940000166688.b	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190376.b	ENSGT00940000166688.b	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.i #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190376.b	ENSGT00940000166688.b	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.i #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190376.b	ENSGT00940000166688.b	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Monodontidae	ANCESTRAL SPECIES	8	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654.i #15	ENSGT00990000210587	ENSGT00390000011654.j #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190376.b	ENSGT00940000166688.b	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Narwhal	MODERN SPECIES	295	DYM (ENSMMNG00015001014)	ENSMMNG00015000947 #7	ENSMMNG00015000862 ##8	LIPG (ENSMMNG00015000826) #9	ENSMMNG00015000802	ACAA2 (ENSMMNG00015000776) #10	ENSMMNG00015000736 #11	ENSMMNG00015000706 #16	MRO (ENSMMNG00015000680) #17	ME2 (ENSMMNG00015000602) #18	ELAC1 (ENSMMNG00015000560) #19	SMAD4 (ENSMMNG00015000527) #20	MEX3C (ENSMMNG00015000471) #21	ENSMMNG00015000436	ENSMMNG00015000421	DCC (ENSMMNG00015000224) #22	ENSMMNG00015000016	MBD2 (ENSMMNG00015007380) #23	POLI (ENSMMNG00015007331) #24	STARD6 (ENSMMNG00015007313) #25	C18orf54 (ENSMMNG00015007290)	RAB27B (ENSMMNG00015007238) #26	CCDC68 (ENSMMNG00015007197) #27	TCF4 (ENSMMNG00015006368) #28	ENSMMNG00015006103	TXNL1 (ENSMMNG00015006084) #30	WDR7 (ENSMMNG00015005999) #31	ST8SIA3 (ENSMMNG00015005958) #32	ONECUT2 (ENSMMNG00015005900) #33	FECH (ENSMMNG00015005882) #34	NARS1 (ENSMMNG00015005856) #35
Beluga whale	MODERN SPECIES	25	ENSDLEG00000004561	ACAA2 (ENSDLEG00000004552) #10	MYO5B (ENSDLEG00000004517) #11	CFAP53 (ENSDLEG00000004488) #12	MBD1 (ENSDLEG00000004462) #13	CXXC1 (ENSDLEG00000004445) #14	ENSDLEG00000004437	ENSDLEG00000004434 #15	MAPK4 (ENSDLEG00000004428) #16	MRO (ENSDLEG00000004425) #17	ME2 (ENSDLEG00000004409) #18	ELAC1 (ENSDLEG00000004401) #19	SMAD4 (ENSDLEG00000004395) #20	MEX3C (ENSDLEG00000004392) #21	ENSDLEG00000004386	DCC (ENSDLEG00000004245) #22	MBD2 (ENSDLEG00000004210) #23	POLI (ENSDLEG00000004201) #24	STARD6 (ENSDLEG00000004192) #25	CUNH18orf54 (ENSDLEG00000004187)	DYNAP (ENSDLEG00000004184)	RAB27B (ENSDLEG00000004179) #26	CCDC68 (ENSDLEG00000004169) #27	TCF4 (ENSDLEG00000004150) #28	ENSDLEG00000004143	TXNL1 (ENSDLEG00000004132) #30	WDR7 (ENSDLEG00000004055) #31	ST8SIA3 (ENSDLEG00000004038) #32	ONECUT2 (ENSDLEG00000004035) #33	FECH (ENSDLEG00000004026) #34	NARS (ENSDLEG00000004016) #35
Vaquita	MODERN SPECIES	5	ENSPSNG00000009066	MYO5B (ENSPSNG00000008965) #11	CFAP53 (ENSPSNG00000008868) #12	MBD1 (ENSPSNG00000008606) #13	CXXC1 (ENSPSNG00000008435) #14	SKA1 (ENSPSNG00000008361) #15	ENSPSNG00000008320 #16	MRO (ENSPSNG00000008257) #17	ME2 (ENSPSNG00000008129) #18	ELAC1 (ENSPSNG00000008066) #19	SMAD4 (ENSPSNG00000008007) #20	MEX3C (ENSPSNG00000007985) #21	ENSPSNG00000007972	ENSPSNG00000007942	ENSPSNG00000007925	DCC (ENSPSNG00000007423) #22	MBD2 (ENSPSNG00000007268) #23	POLI (ENSPSNG00000007184) #24	STARD6 (ENSPSNG00000007129) #25	C18orf54 (ENSPSNG00000007061)	RAB27B (ENSPSNG00000006964) #26	CCDC68 (ENSPSNG00000006910) #27	ENSPSNG00000006882	ENSPSNG00000006776	TCF4 (ENSPSNG00000005296) #28	TXNL1 (ENSPSNG00000004744) #30	WDR7 (ENSPSNG00000004704) #31	ST8SIA3 (ENSPSNG00000004660) #32	ONECUT2 (ENSPSNG00000004637) #33	FECH (ENSPSNG00000004601) #34	NARS1 (ENSPSNG00000004542) #35
Dolphin	MODERN SPECIES	2449																DCC (ENSTTRG00000015629) #22
Sperm whale	MODERN SPECIES	10	ENSPCTG00005010783 #11	CFAP53 (ENSPCTG00005012030) #12	MBD1 (ENSPCTG00005012098) #13	CXXC1 (ENSPCTG00005012649) #14	SKA1 (ENSPCTG00005012981) #15	ENSPCTG00005013095 #16	MRO (ENSPCTG00005013153) #17	ME2 (ENSPCTG00005013372) #18	ELAC1 (ENSPCTG00005013645) #19	SMAD4 (ENSPCTG00005013716) #20	MEX3C (ENSPCTG00005013828) #21	ENSPCTG00005013881	ENSPCTG00005013928	ENSPCTG00005013989	ENSPCTG00005014007	DCC (ENSPCTG00005014061) #22	MBD2 (ENSPCTG00005015131) #23	POLI (ENSPCTG00005015301) #24	STARD6 (ENSPCTG00005015396) #25	C19H18orf54 (ENSPCTG00005004368)	ENSPCTG00005004391	RAB27B (ENSPCTG00005004412) #26	CCDC68 (ENSPCTG00005004429) #27	TCF4 (ENSPCTG00005004622) #28	ENSPCTG00005005635	TXNL1 (ENSPCTG00005005651) #30	WDR7 (ENSPCTG00005005758) #31	ST8SIA3 (ENSPCTG00005005861) #32	ONECUT2 (ENSPCTG00005005889) #33	FECH (ENSPCTG00005005911) #34	NARS1 (ENSPCTG00005005993) #35
Blue whale	MODERN SPECIES	5	LIPG (ENSBMSG00010021562) #9	ACAA2 (ENSBMSG00010021576) #10	MYO5B (ENSBMSG00010009537) #11	CFAP53 (ENSBMSG00010009568) #12	MBD1 (ENSBMSG00010009608) #13	CXXC1 (ENSBMSG00010009732) #14	SKA1 (ENSBMSG00010009775) #15	ENSBMSG00010009796	ENSBMSG00010009805 #16	MRO (ENSBMSG00010009824) #17	ME2 (ENSBMSG00010009846) #18	ELAC1 (ENSBMSG00010009858) #19	SMAD4 (ENSBMSG00010009874) #20	MEX3C (ENSBMSG00010009893) #21	ENSBMSG00010009902	DCC (ENSBMSG00010009938) #22	ENSBMSG00010010006	MBD2 (ENSBMSG00010010022) #23	POLI (ENSBMSG00010010045) #24	STARD6 (ENSBMSG00010010059) #25	C18orf54 (ENSBMSG00010010073)	ENSBMSG00010010086	RAB27B (ENSBMSG00010010092) #26	CCDC68 (ENSBMSG00010010114) #27	TCF4 (ENSBMSG00010010256) #28	ENSBMSG00010010977	TXNL1 (ENSBMSG00010010991) #30	WDR7 (ENSBMSG00010011015) #31	ST8SIA3 (ENSBMSG00010011033) #32	FECH (ENSBMSG00010011071) #34	NARS1 (ENSBMSG00010011098) #35
Pecora	ANCESTRAL SPECIES	26	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Percora_a	ANCESTRAL SPECIES	28	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Bovidae	ANCESTRAL SPECIES	28	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Caprinae	ANCESTRAL SPECIES	25	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642.b #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Goat	MODERN SPECIES	16	ENSCHIG00000011677 ##8	LIPG (ENSCHIG00000015994) #9	ENSCHIG00000003894	ACAA2 (ENSCHIG00000024466) #10	MYO5B (ENSCHIG00000016585) #11	CFAP53 (ENSCHIG00000001175) #12	MBD1 (ENSCHIG00000021134) #13	CXXC1 (ENSCHIG00000014305) #14	SKA1 (ENSCHIG00000014694) #15	MAPK4 (ENSCHIG00000013396) #16	ENSCHIG00000016460 #17	ME2 (ENSCHIG00000001144) #18	ELAC1 (ENSCHIG00000014278) #19	SMAD4 (ENSCHIG00000019181) #20	MEX3C (ENSCHIG00000017962) #21	DCC (ENSCHIG00000025162) #22	ENSCHIG00000019871	MBD2 (ENSCHIG00000011602) #23	POLI (ENSCHIG00000020002) #24	STARD6 (ENSCHIG00000015688) #25	C18orf54 (ENSCHIG00000022200)	ENSCHIG00000015134	ENSCHIG00000009672	RAB27B (ENSCHIG00000016115) #26	CCDC68 (ENSCHIG00000011317) #27	TCF4 (ENSCHIG00000019406) #28	ENSCHIG00000012821	TXNL1 (ENSCHIG00000021510) #30	WDR7 (ENSCHIG00000002769) #31	ST8SIA3 (ENSCHIG00000020763) #32	ONECUT2 (ENSCHIG00000012085) #33
Rambouillet Sheep	MODERN SPECIES	15	ENSOARG00020011257	C18orf32 (ENSOARG00020011289) #7	RPL17 (ENSOARG00020011339) #8	LIPG (ENSOARG00020011622) #9	ACAA2 (ENSOARG00020011796) #10	MYO5B (ENSOARG00020012171) #11	ENSOARG00020013652 #13	SKA1 (ENSOARG00020015277) #15	MAPK4 (ENSOARG00020015369) #16	MRO (ENSOARG00020015446) #17	ME2 (ENSOARG00020015563) #18	ELAC1 (ENSOARG00020015975) #19	SMAD4 (ENSOARG00020016034) #20	MEX3C (ENSOARG00020016147) #21	ENSOARG00020016162	DCC (ENSOARG00020016246) #22	ENSOARG00020016832	MBD2 (ENSOARG00020016893) #23	POLI (ENSOARG00020017236) #24	STARD6 (ENSOARG00020017708) #25	ENSOARG00020017825	RAB27B (ENSOARG00020017852) #26	CCDC68 (ENSOARG00020017914) #27	TCF4 (ENSOARG00020018136) #28	ENSOARG00020023628	TXNL1 (ENSOARG00020023636) #30	ENSOARG00020023680	WDR7 (ENSOARG00020023720) #31	ST8SIA3 (ENSOARG00020023917) #32	ONECUT2 (ENSOARG00020023929) #33	FECH (ENSOARG00020023945) #34
Bovinae	ANCESTRAL SPECIES	28	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190719	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Bos	ANCESTRAL SPECIES	29	ENSGT00390000018741.j #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190719	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Bos_a	ANCESTRAL SPECIES	28	ENSGT00390000018741.j #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00970000193421.C.a	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Domestic yak	MODERN SPECIES	13	ENSBGRG00000022965 #8	LIPG (ENSBGRG00000023098) #9	ACAA2 (ENSBGRG00000023212) #10	ENSBGRG00000023371 #11	ENSBGRG00000023396 #11	MBD1 (ENSBGRG00000023527) #13	CXXC1 (ENSBGRG00000023942) #14	SKA1 (ENSBGRG00000024086) #15	MAPK4 (ENSBGRG00000024208) #16	MRO (ENSBGRG00000024247) #17	ME2 (ENSBGRG00000024333) #18	ELAC1 (ENSBGRG00000024517) #19	SMAD4 (ENSBGRG00000024537) #20	MEX3C (ENSBGRG00000024594) #21	ENSBGRG00000024631	DCC (ENSBGRG00000024683) #22	MBD2 (ENSBGRG00000025200) #23	POLI (ENSBGRG00000025249) #24	STARD6 (ENSBGRG00000025257) #25	C18orf54 (ENSBGRG00000025272)	ENSBGRG00000025328	ENSBGRG00000025352	ENSBGRG00000025356	ENSBGRG00000025400	RAB27B (ENSBGRG00000025409) #26	CCDC68 (ENSBGRG00000025432) #27	TCF4 (ENSBGRG00000025535) #28	ENSBGRG00000026050	ENSBGRG00000026057	ENSBGRG00000010575	TXNL1 (ENSBGRG00000010589) #30
Wild yak	MODERN SPECIES	1003													ENSBMUG00000000556	ENSBMUG00000000528	ENSBMUG00000000509	DCC (ENSBMUG00000000451) #22
Bos_b	ANCESTRAL SPECIES	34	ENSGT00390000018741.i.b #7	ENSGT00950000183010.a.b.a.b.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00960000190719	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00970000197079	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Hybrid Bos Indicus	MODERN SPECIES	16	ENSBIXG00005007771 ##8	LIPG (ENSBIXG00005004622) #9	ACAA2 (ENSBIXG00005026872) #10	MYO5B (ENSBIXG00005026770) #11	ENSBIXG00005026615 #13	CXXC1 (ENSBIXG00005026115) #14	SKA1 (ENSBIXG00005004443) #15	MAPK4 (ENSBIXG00005025994) #16	MRO (ENSBIXG00005025968) #17	ME2 (ENSBIXG00005025823) #18	ELAC1 (ENSBIXG00005025678) #19	SMAD4 (ENSBIXG00005025648) #20	MEX3C (ENSBIXG00005025578) #21	ENSBIXG00005025566	ENSBIXG00005025532	DCC (ENSBIXG00005004333) #22	MBD2 (ENSBIXG00005004276) #23	ENSBIXG00005025041	ENSBIXG00005025038	POLI (ENSBIXG00005024986) #24	STARD6 (ENSBIXG00005024888) #25	C18orf54 (ENSBIXG00005024871)	RAB27B (ENSBIXG00005024664) #26	CCDC68 (ENSBIXG00005024584) #27	TCF4 (ENSBIXG00005024466) #28	ENSBIXG00005023809	TXNL1 (ENSBIXG00005023757) #30	WDR7 (ENSBIXG00005006281) #31	ST8SIA3 (ENSBIXG00005023483) #32	ONECUT2 (ENSBIXG00005023442) #33	FECH (ENSBIXG00005006900) #34
Cow	MODERN SPECIES	16	C24H18orf32 (ENSBTAG00000021334) #7	RPL17 (ENSBTAG00000022902) ##8	LIPG (ENSBTAG00000048916) #9	ACAA2 (ENSBTAG00000002863) #10	MYO5B (ENSBTAG00000019455) #11	MBD1 (ENSBTAG00000003801) #13	CXXC1 (ENSBTAG00000021884) #14	SKA1 (ENSBTAG00000018216) #15	MAPK4 (ENSBTAG00000009907) #16	MRO (ENSBTAG00000047635) #17	ME2 (ENSBTAG00000016269) #18	ELAC1 (ENSBTAG00000005683) #19	SMAD4 (ENSBTAG00000006919) #20	MEX3C (ENSBTAG00000014886) #21	ENSBTAG00000049503	DCC (ENSBTAG00000048378) #22	MBD2 (ENSBTAG00000037457) #23	ENSBTAG00000049603	POLI (ENSBTAG00000009129) #24	STARD6 (ENSBTAG00000008168) #25	C24H18orf54 (ENSBTAG00000008169)	CUPIN1 (ENSBTAG00000048804)	ENSBTAG00000013871	RAB27B (ENSBTAG00000002788) #26	CCDC68 (ENSBTAG00000008158) #27	TCF4 (ENSBTAG00000016462) #28	TXNL1 (ENSBTAG00000015731) #30	WDR7 (ENSBTAG00000004005) #31	ST8SIA3 (ENSBTAG00000007347) #32	ONECUT2 (ENSBTAG00000022819) #33	FECH (ENSBTAG00000006393) #34
American bison	MODERN SPECIES	3263															ENSBBBG00000018605	DCC (ENSBBBG00000018654) #22	MBD2 (ENSBBBG00000018660) #23	POLI (ENSBBBG00000004646) #24	STARD6 (ENSBBBG00000018687) #25	C18orf54 (ENSBBBG00000004674)	RAB27B (ENSBBBG00000018758) #26	CCDC68 (ENSBBBG00000004722) #27	TCF4 (ENSBBBG00000019287) #28	ENSBBBG00000005021	TXNL1 (ENSBBBG00000019350) #30	WDR7 (ENSBBBG00000008661) #31	ST8SIA3 (ENSBBBG00000019465) #32	ONECUT2 (ENSBBBG00000019474) #33	FECH (ENSBBBG00000005210) #34	NARS1 (ENSBBBG00000019498) #35	ATP8B1 (ENSBBBG00000005293) #37
Siberian musk deer	MODERN SPECIES	145																DCC (ENSMMSG00000006766) #22
Yarkand deer	MODERN SPECIES	19	MYO5B (ENSCHYG00000026574) #11	ENSCHYG00000026350 #13	CXXC1 (ENSCHYG00000026245) #14	SKA1 (ENSCHYG00000026215) #15	MAPK4 (ENSCHYG00000026191) #16	MRO (ENSCHYG00000026169) #17	ME2 (ENSCHYG00000026116) #18	ELAC1 (ENSCHYG00000026085) #19	SMAD4 (ENSCHYG00000026027) #20	MEX3C (ENSCHYG00000025999) #21	ENSCHYG00000025987	ENSCHYG00000025984 #8	ENSCHYG00000025969	ENSCHYG00000025960	ENSCHYG00000025951	DCC (ENSCHYG00000025701) #22	MBD2 (ENSCHYG00000025532) #23	POLI (ENSCHYG00000025478) #24	STARD6 (ENSCHYG00000025439) #25	C18orf54 (ENSCHYG00000025339)	ENSCHYG00000025310	ENSCHYG00000025287	RAB27B (ENSCHYG00000025256) #26	CCDC68 (ENSCHYG00000025233) #27	TCF4 (ENSCHYG00000024974) #28	ENSCHYG00000024892	TXNL1 (ENSCHYG00000024776) #30	ENSCHYG00000024655	WDR7 (ENSCHYG00000024551) #31	ENSCHYG00000024523	ST8SIA3 (ENSCHYG00000024501) #32
Camelidae	ANCESTRAL SPECIES	53	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Arabian camel	MODERN SPECIES	23	RPL17 (ENSCDRG00005011453) ##8	LIPG (ENSCDRG00005010970) #9	ENSCDRG00005010930	ACAA2 (ENSCDRG00005010799) #10	MYO5B (ENSCDRG00005010461) #11	CFAP53 (ENSCDRG00005010332) #12	MBD1 (ENSCDRG00005010072) #13	CXXC1 (ENSCDRG00005009892) #14	SKA1 (ENSCDRG00005009696) #15	MAPK4 (ENSCDRG00005009618) #16	MRO (ENSCDRG00005009438) #17	ME2 (ENSCDRG00005009190) #18	ELAC1 (ENSCDRG00005009129) #19	SMAD4 (ENSCDRG00005009019) #20	MEX3C (ENSCDRG00005008924) #21	DCC (ENSCDRG00005021692) #22	MBD2 (ENSCDRG00005021689) #23	POLI (ENSCDRG00005021682) #24	STARD6 (ENSCDRG00005021679) #25	C18orf54 (ENSCDRG00005021676)	ENSCDRG00005021674	RAB27B (ENSCDRG00005021672) #26	CCDC68 (ENSCDRG00005021671) #27	TCF4 (ENSCDRG00005020285) #28	TXNL1 (ENSCDRG00005020164) #30	WDR7 (ENSCDRG00005020090) #31	ST8SIA3 (ENSCDRG00005020077) #32	ONECUT2 (ENSCDRG00005020043) #33	FECH (ENSCDRG00005020023) #34	NARS1 (ENSCDRG00005019984) #35	ATP8B1 (ENSCDRG00005019962) #37
Alpaca	MODERN SPECIES	2156															MEX3C (ENSVPAG00000003137) #21	DCC (ENSVPAG00000003138) #22
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Carnivora	ANCESTRAL SPECIES	13	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Caniformia	ANCESTRAL SPECIES	9	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Ursidae	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301.w.b #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Ursus	ANCESTRAL SPECIES	25	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.d ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301.w.b #31
Polar bear	MODERN SPECIES	96	C18orf32 (ENSUMAG00000002755) #7	ENSUMAG00000002766 ##8	LIPG (ENSUMAG00000002779) #9	ACAA2 (ENSUMAG00000002792) #10	MYO5B (ENSUMAG00000002812) #11	MBD1 (ENSUMAG00000002947) #13	CXXC1 (ENSUMAG00000003014) #14	SKA1 (ENSUMAG00000003034) #15	MAPK4 (ENSUMAG00000003042) #16	MRO (ENSUMAG00000003055) #17	ME2 (ENSUMAG00000003096) #18	ELAC1 (ENSUMAG00000003132) #19	SMAD4 (ENSUMAG00000003120) #20	MEX3C (ENSUMAG00000003137) #21	ENSUMAG00000003148	DCC (ENSUMAG00000003174) #22	MBD2 (ENSUMAG00000003257) #23	POLI (ENSUMAG00000003446) #24	STARD6 (ENSUMAG00000003451) #25	C18orf54 (ENSUMAG00000003457)	ENSUMAG00000003482	RAB27B (ENSUMAG00000003499) #26	CCDC68 (ENSUMAG00000003505) #27	TCF4 (ENSUMAG00000003526) #28	ENSUMAG00000003531 #28	ENSUMAG00000003543	TXNL1 (ENSUMAG00000003547) #30	WDR7 (ENSUMAG00000003707) #31
Giant Panda	MODERN SPECIES	5	ENSAMEG00000027976 #7	RPL17 (ENSAMEG00000009498) ##8	LIPG (ENSAMEG00000009434) #9	ACAA2 (ENSAMEG00000009411) #10	MYO5B (ENSAMEG00000009253) #11	MBD1 (ENSAMEG00000000238) #13	CXXC1 (ENSAMEG00000000259) #14	SKA1 (ENSAMEG00000000280) #15	MAPK4 (ENSAMEG00000026715) #16	MRO (ENSAMEG00000002971) #17	ME2 (ENSAMEG00000002933) #18	ELAC1 (ENSAMEG00000002931) #19	SMAD4 (ENSAMEG00000002899) #20	MEX3C (ENSAMEG00000002897) #21	ENSAMEG00000002879	DCC (ENSAMEG00000017215) #22	MBD2 (ENSAMEG00000017208) #23	POLI (ENSAMEG00000017194) #24	STARD6 (ENSAMEG00000017188) #25	C18orf54 (ENSAMEG00000017187)	ENSAMEG00000003344	ENSAMEG00000031262	ENSAMEG00000031006	RAB27B (ENSAMEG00000017177) #26	CCDC68 (ENSAMEG00000017171) #27	TCF4 (ENSAMEG00000017162) #28	TXNL1 (ENSAMEG00000014729) #30	WDR7 (ENSAMEG00000014743) #31	ST8SIA3 (ENSAMEG00000014804) #32	ONECUT2 (ENSAMEG00000025402) #33	FECH (ENSAMEG00000014813) #34
Mustelinae	ANCESTRAL SPECIES	5	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
American mink	MODERN SPECIES	1	RPL17 (ENSNVIG00000001575) ##8	LIPG (ENSNVIG00000001676) #9	ACAA2 (ENSNVIG00000001712) #10	MYO5B (ENSNVIG00000001798) #11	CFAP53 (ENSNVIG00000001864) #12	ENSNVIG00000001883	MBD1 (ENSNVIG00000001896) #13	CXXC1 (ENSNVIG00000002380) #14	SKA1 (ENSNVIG00000002493) #15	MAPK4 (ENSNVIG00000002506) #16	MSTRO (ENSNVIG00000002520) #17	ME2 (ENSNVIG00000002617) #18	RNZ1 (ENSNVIG00000002709) #19	SMAD4 (ENSNVIG00000002745) #20	MEX3C (ENSNVIG00000002828) #21	DCC (ENSNVIG00000002859) #22	MBD2 (ENSNVIG00000002943) #23	POLI (ENSNVIG00000002960) #24	ENSNVIG00000003016 #25	C18orf54 (ENSNVIG00000003027)
Ferret	MODERN SPECIES	481																DCC (ENSMPUG00000010503) #22	ENSMPUG00000010514 #23
Canidae	ANCESTRAL SPECIES	58						ENSGT00390000000724.c.b	ENSGT00940000156554	ENSGT00390000002368	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Canis_lupus	ANCESTRAL SPECIES		ENSGT00390000000950.c.b.n	ENSGT00390000001376.cb.b	ENSGT00390000008294.e.a.b.e	ENSGT00940000155019.a.b	ENSGT00390000000724.c.b	ENSGT00940000156554	ENSGT00390000002368.u	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000153112.D.h.b	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Dog	MODERN SPECIES		ENSCAFG00845004554	ENSCAFG00845004539	CCN2 (ENSCAFG00845004492)	ENSCAFG00845004478	LDLRAD4 (ENSCAFG00845004440)	FAM210A (ENSCAFG00845003487)	RNMT (ENSCAFG00845003471)	MC5R (ENSCAFG00845003464)	MC2R (ENSCAFG00845003453)	MRO (ENSCAFG00845003352) #17	ME2 (ENSCAFG00845003293) #18	SMAD4 (ENSCAFG00845003249) #19	SMAD4 (ENSCAFG00845003229) #20	MEX3C (ENSCAFG00845003206) #21	ENSCAFG00845003189	DCC (ENSCAFG00845003053) #22	ENSCAFG00845002966	MBD2 (ENSCAFG00845002942) #23	POLI (ENSCAFG00845002887) #24	STARD6 (ENSCAFG00845002868) #25	CUPIN1 (ENSCAFG00845002731)	ENSCAFG00845002605	RAB27B (ENSCAFG00845002581) #26	CCDC68 (ENSCAFG00845002566) #27	TCF4 (ENSCAFG00845002403) #28	TXNL1 (ENSCAFG00845002269) #30	ENSCAFG00845002237	WDR7 (ENSCAFG00845002062) #31	ST8SIA3 (ENSCAFG00845001921) #32	ONECUT2 (ENSCAFG00845001888) #33	FECH (ENSCAFG00845001850) #34
Dingo	MODERN SPECIES	125	MOXD1 (ENSCAFG00020021762)	ENSCAFG00020021755	ENSCAFG00020021753	CCN2 (ENSCAFG00020021747)	LDLRAD4 (ENSCAFG00020021740)	FAM210A (ENSCAFG00020021732)	ENSCAFG00020021706	MC5R (ENSCAFG00020021703)	MC2R (ENSCAFG00020021702)	MRO (ENSCAFG00020021690) #17	ME2 (ENSCAFG00020021686) #18	ELAC1 (ENSCAFG00020021678) #19	SMAD4 (ENSCAFG00020021674) #20	MEX3C (ENSCAFG00020021673) #21	ENSCAFG00020021658	DCC (ENSCAFG00020021641) #22	MBD2 (ENSCAFG00020021622) #23	POLI (ENSCAFG00020021618) #24	ENSCAFG00020021615	STARD6 (ENSCAFG00020021613) #25	C18orf54 (ENSCAFG00020021611)	ENSCAFG00020021603	ENSCAFG00020021601	RAB27B (ENSCAFG00020021594) #26	CCDC68 (ENSCAFG00020021589) #27	ENSCAFG00020021285 #28	ENSCAFG00020021197 #28	TXNL1 (ENSCAFG00020021181) #30	ENSCAFG00020021173	WDR7 (ENSCAFG00020021129) #31	ST8SIA3 (ENSCAFG00020021095) #32
Red fox	MODERN SPECIES	25				ENSVVUG00000014500	LDLRAD4 (ENSVVUG00000014523)	FAM210A (ENSVVUG00000014540)	RNMT (ENSVVUG00000014550)	MC5R (ENSVVUG00000014564)	MC2R (ENSVVUG00000014566)	MRO (ENSVVUG00000014571) #17	ME2 (ENSVVUG00000014587) #18	ELAC1 (ENSVVUG00000014595) #19	SMAD4 (ENSVVUG00000014609) #20	MEX3C (ENSVVUG00000014636) #21	ENSVVUG00000014654	DCC (ENSVVUG00000014667) #22	ENSVVUG00000014674	MBD2 (ENSVVUG00000014700) #23	POLI (ENSVVUG00000014845) #24	STARD6 (ENSVVUG00000014848) #25	CUNH18orf54 (ENSVVUG00000014854)	CUNH18orf54 (ENSVVUG00000014859)	ENSVVUG00000014866	ENSVVUG00000014874	RAB27B (ENSVVUG00000014878) #26	CCDC68 (ENSVVUG00000014885) #27	TCF4 (ENSVVUG00000014890) #28	TXNL1 (ENSVVUG00000014906) #30	WDR7 (ENSVVUG00000014912) #31	ENSVVUG00000014923	ST8SIA3 (ENSVVUG00000014931) #32
Felidae	ANCESTRAL SPECIES	24	ENSGT00950000183010.a.a.a.b.a.a.b.a.a ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT01090000260040.a.a.a	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Panthera	ANCESTRAL SPECIES	24	ENSGT00950000183010.a.a.a.b.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT01090000260040.a.a.a	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Tiger	MODERN SPECIES	143	ENSPTIG00000007691 ##8	LIPG (ENSPTIG00000000449) #9	ACAA2 (ENSPTIG00000021827) #10	MYO5B (ENSPTIG00000019987) #11	CFAP53 (ENSPTIG00000018895) #12	MBD1 (ENSPTIG00000021231) #13	CXXC1 (ENSPTIG00000017258) #14	SKA1 (ENSPTIG00000015731) #15	ENSPTIG00000015504 #16	MRO (ENSPTIG00000013632) #17	ME2 (ENSPTIG00000007762) #18	ELAC1 (ENSPTIG00000006619) #19	SMAD4 (ENSPTIG00000005616) #20	MEX3C (ENSPTIG00000004865) #21	ENSPTIG00000021315	DCC (ENSPTIG00000013104) #22	MBD2 (ENSPTIG00000011491) #23	POLI (ENSPTIG00000009520) #24	STARD6 (ENSPTIG00000008640) #25	C18orf54 (ENSPTIG00000007461)	RAB27B (ENSPTIG00000006492) #26	CCDC68 (ENSPTIG00000004987) #27	TCF4 (ENSPTIG00000019887) #28	ENSPTIG00000001536	TXNL1 (ENSPTIG00000017663) #30	WDR7 (ENSPTIG00000010990) #31	ST8SIA3 (ENSPTIG00000010085) #32	FECH (ENSPTIG00000007430) #34	NARS1 (ENSPTIG00000006800) #35	ATP8B1 (ENSPTIG00000021846) #37	NEDD4L (ENSPTIG00000007076)
Panthera_a	ANCESTRAL SPECIES	26	ENSGT00390000018741.m #7	ENSGT00950000183010.a.a.a.b.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
leopard	MODERN SPECIES	43	LIPG (ENSPPRG00000009382) #9	ACAA2 (ENSPPRG00000009885) #10	MYO5B (ENSPPRG00000012444) #11	CFAP53 (ENSPPRG00000012971) #12	MBD1 (ENSPPRG00000021387) #13	CXXC1 (ENSPPRG00000001170) #14	SKA1 (ENSPPRG00000002324) #15	MAPK4 (ENSPPRG00000003118) #16	MRO (ENSPPRG00000004466) #17	ME2 (ENSPPRG00000008913) #18	ELAC1 (ENSPPRG00000009439) #19	SMAD4 (ENSPPRG00000010397) #20	MEX3C (ENSPPRG00000012151) #21	ENSPPRG00000013111	ENSPPRG00000015809	DCC (ENSPPRG00000000462) #22	MBD2 (ENSPPRG00000001698) #23	POLI (ENSPPRG00000003673) #24	STARD6 (ENSPPRG00000004011) #25	C18orf54 (ENSPPRG00000004732)	RAB27B (ENSPPRG00000004858) #26	CCDC68 (ENSPPRG00000005242) #27	TCF4 (ENSPPRG00000006150) #28	ENSPPRG00000017776	TXNL1 (ENSPPRG00000007810) #30	WDR7 (ENSPPRG00000011801) #31	ST8SIA3 (ENSPPRG00000012927) #32	ONECUT2 (ENSPPRG00000013061) #33	FECH (ENSPPRG00000014934) #34	NARS1 (ENSPPRG00000015312) #35	ATP8B1 (ENSPPRG00000019108) #37
lion	MODERN SPECIES	12	LIPG (ENSPLOG00000014024) #9	ACAA2 (ENSPLOG00000013846) #10	MYO5B (ENSPLOG00000013501) #11	CFAP53 (ENSPLOG00000013386) #12	MBD1 (ENSPLOG00000013232) #13	CXXC1 (ENSPLOG00000013121) #14	SKA1 (ENSPLOG00000013016) #15	ENSPLOG00000012947 #16	MRO (ENSPLOG00000012819) #17	ME2 (ENSPLOG00000012643) #18	ELAC1 (ENSPLOG00000012525) #19	SMAD4 (ENSPLOG00000012428) #20	MEX3C (ENSPLOG00000012379) #21	ENSPLOG00000012345	ENSPLOG00000012308	DCC (ENSPLOG00000011680) #22	MBD2 (ENSPLOG00000011506) #23	POLI (ENSPLOG00000011432) #24	STARD6 (ENSPLOG00000011360) #25	C18orf54 (ENSPLOG00000011291)	DYNAP (ENSPLOG00000011216)	RAB27B (ENSPLOG00000011162) #26	CCDC68 (ENSPLOG00000011056) #27	TCF4 (ENSPLOG00000010490) #28	TXNL1 (ENSPLOG00000010244) #30	WDR7 (ENSPLOG00000010168) #31	ST8SIA3 (ENSPLOG00000010116) #32	ONECUT2 (ENSPLOG00000010100) #33	NARS1 (ENSPLOG00000009844) #35	ATP8B1 (ENSPLOG00000009656) #37	NEDD4L (ENSPLOG00000009056)
Cat	MODERN SPECIES	243	DYM (ENSFCAG00000012954)	ENSFCAG00000022684 #7	RPL17 (ENSFCAG00000011342) ##8	LIPG (ENSFCAG00000012354) #9	MYO5B (ENSFCAG00000009880) #11	MBD1 (ENSFCAG00000015730) #13	CXXC1 (ENSFCAG00000006135) #14	SKA1 (ENSFCAG00000023341) #15	MAPK4 (ENSFCAG00000012154) #16	MRO (ENSFCAG00000030720) #17	ME2 (ENSFCAG00000005659) #18	ELAC1 (ENSFCAG00000039876) #19	SMAD4 (ENSFCAG00000005257) #20	MEX3C (ENSFCAG00000027546) #21	ENSFCAG00000022420	DCC (ENSFCAG00000012953) #22	MBD2 (ENSFCAG00000022047) #23	POLI (ENSFCAG00000039381) #24	STARD6 (ENSFCAG00000028138) #25	CD3H18orf54 (ENSFCAG00000009985)	ENSFCAG00000048015	ENSFCAG00000050208	RAB27B (ENSFCAG00000022264) #26	CCDC68 (ENSFCAG00000012086) #27	TCF4 (ENSFCAG00000014682) #28	TXNL1 (ENSFCAG00000022537) #30	WDR7 (ENSFCAG00000011414) #31	ST8SIA3 (ENSFCAG00000041173) #32	ONECUT2 (ENSFCAG00000010819) #33	NARS1 (ENSFCAG00000010822) #35	ATP8B1 (ENSFCAG00000014301) #37
Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00950000183010.b ##8	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1271															ENSMLUG00000029997 #22	ENSMLUG00000009626 #22	MBD2 (ENSMLUG00000009980) #23	POLI (ENSMLUG00000010010) #24	C18orf54 (ENSMLUG00000008747)	ENSMLUG00000016488	ZNF24 (ENSMLUG00000016483)	ENSMLUG00000014514	ENSMLUG00000025290	MAPRE2 (ENSMLUG00000016478)
Microbat	MODERN SPECIES	1271																ENSMLUG00000029997 #22	ENSMLUG00000009626 #22	MBD2 (ENSMLUG00000009980) #23	POLI (ENSMLUG00000010010) #24	C18orf54 (ENSMLUG00000008747)	ENSMLUG00000016488	ZNF24 (ENSMLUG00000016483)	ENSMLUG00000014514	ENSMLUG00000025290	MAPRE2 (ENSMLUG00000016478)
Greater horseshoe bat	MODERN SPECIES	10	DYM (ENSRFEG00010014390)	C18orf32 (ENSRFEG00010014487) #7	LIPG (ENSRFEG00010014542) #9	ACAA2 (ENSRFEG00010014660) #10	MYO5B (ENSRFEG00010014892) #11	CFAP53 (ENSRFEG00010015022) #12	MBD1 (ENSRFEG00010015077) #13	CXXC1 (ENSRFEG00010015320) #14	SKA1 (ENSRFEG00010015982) #15	MAPK4 (ENSRFEG00010016193) #16	MRO (ENSRFEG00010016266) #17	ME2 (ENSRFEG00010016375) #18	ELAC1 (ENSRFEG00010016582) #19	SMAD4 (ENSRFEG00010016623) #20	MEX3C (ENSRFEG00010016751) #21	DCC (ENSRFEG00010016811) #22	MBD2 (ENSRFEG00010017760) #23	POLI (ENSRFEG00010017875) #24	STARD6 (ENSRFEG00010017932) #25	C18orf54 (ENSRFEG00010017994)	RAB27B (ENSRFEG00010018080) #26	CCDC68 (ENSRFEG00010018112) #27	TCF4 (ENSRFEG00010018296) #28	TXNL1 (ENSRFEG00010019852) #30	WDR7 (ENSRFEG00010019915) #31	ST8SIA3 (ENSRFEG00010020110) #32	ONECUT2 (ENSRFEG00010020129) #33	FECH (ENSRFEG00010020141) #34	NARS1 (ENSRFEG00010020203) #35	ATP8B1 (ENSRFEG00010020234) #37	NEDD4L (ENSRFEG00010020297)
Megabat	MODERN SPECIES	2902																DCC (ENSPVAG00000003765) #22
Equus	ANCESTRAL SPECIES	36	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT01090000263349	ENSGT00400000022381	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00900000143822	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33
Donkey	MODERN SPECIES	27	DYM (ENSEASG00005015845)	ENSEASG00005031152 #7	ENSEASG00005025626 #8	LIPG (ENSEASG00005005399) #9	ACAA2 (ENSEASG00005005395) #10	MYO5B (ENSEASG00005004025) #11	ENSEASG00005003857 #13	CXXC1 (ENSEASG00005003826) #14	SKA1 (ENSEASG00005033486) #15	MAPK4 (ENSEASG00005003821) #16	MRO (ENSEASG00005003818) #17	ME2 (ENSEASG00005003813) #18	ELAC1 (ENSEASG00005003810) #19	SMAD4 (ENSEASG00005003805) #20	MEX3C (ENSEASG00005032865) #21	DCC (ENSEASG00005003571) #22	ENSEASG00005003504 #23	POLI (ENSEASG00005003488) #24	STARD6 (ENSEASG00005033368) #25	C18orf54 (ENSEASG00005003480)	ENSEASG00005003475	RAB27B (ENSEASG00005003468) #26	CCDC68 (ENSEASG00005003465) #27	TCF4 (ENSEASG00005003461) #28	ENSEASG00005037138	TXNL1 (ENSEASG00005003437) #30	WDR7 (ENSEASG00005003421) #31	ST8SIA3 (ENSEASG00005003406) #32	ONECUT2 (ENSEASG00005027472) #33	FECH (ENSEASG00005003401) #34	NARS1 (ENSEASG00005003393) #35
Horse	MODERN SPECIES	29	LIPG (ENSECAG00000015140) #9	ENSECAG00000059774	ACAA2 (ENSECAG00000019394) #10	MYO5B (ENSECAG00000022515) #11	CFAP53 (ENSECAG00000053670) #12	MBD1 (ENSECAG00000011497) #13	CXXC1 (ENSECAG00000017698) #14	SKA1 (ENSECAG00000023484) #15	MAPK4 (ENSECAG00000023749) #16	MRO (ENSECAG00000002610) #17	ME2 (ENSECAG00000005517) #18	ELAC1 (ENSECAG00000016230) #19	SMAD4 (ENSECAG00000017857) #20	MEX3C (ENSECAG00000021727) #21	ENSECAG00000055237	DCC (ENSECAG00000021760) #22	MBD2 (ENSECAG00000022368) #23	POLI (ENSECAG00000004436) #24	STARD6 (ENSECAG00000011476) #25	C8H18orf54 (ENSECAG00000043788)	ENSECAG00000048982	DYNAP (ENSECAG00000039178)	ENSECAG00000037347	RAB27B (ENSECAG00000013138) #26	CCDC68 (ENSECAG00000015950) #27	TCF4 (ENSECAG00000017265) #28	TXNL1 (ENSECAG00000021822) #30	WDR7 (ENSECAG00000007050) #31	ST8SIA3 (ENSECAG00000011119) #32	ONECUT2 (ENSECAG00000011345) #33	FECH (ENSECAG00000012137) #34
Atlantogenata	ANCESTRAL SPECIES	22	ENSGT00950000183010.a.a.a.b.a.a.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT01050000244995 #12	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Afrotheria	ANCESTRAL SPECIES	23	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Afrotheria_a	ANCESTRAL SPECIES	22	ENSGT00390000018741 #7	ENSGT00950000183010.a.a.a.b.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01100000263809	ENSGT00950000183005.a.a #13	ENSGT00730000111044 #14	ENSGT00390000011654 #15	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00730000111785	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Elephant	MODERN SPECIES	375	RPL17 (ENSLAFG00000005569) ##8	LIPG (ENSLAFG00000003595) #9	ACAA2 (ENSLAFG00000022796) #10	MYO5B (ENSLAFG00000015591) #11	ENSLAFG00000015611	MBD1 (ENSLAFG00000031328) #13	CXXC1 (ENSLAFG00000030706) #14	SKA1 (ENSLAFG00000005238) #15	ENSLAFG00000026060	MAPK4 (ENSLAFG00000013022) #16	MRO (ENSLAFG00000013029) #17	ME2 (ENSLAFG00000001536) #18	ELAC1 (ENSLAFG00000001538) #19	SMAD4 (ENSLAFG00000012595) #20	MEX3C (ENSLAFG00000027818) #21	DCC (ENSLAFG00000001980) #22	MBD2 (ENSLAFG00000014135) #23	POLI (ENSLAFG00000014138) #24	STARD6 (ENSLAFG00000014148) #25	C18orf54 (ENSLAFG00000014151)	ENSLAFG00000028483	ENSLAFG00000029901	RAB27B (ENSLAFG00000001220) #26	CCDC68 (ENSLAFG00000001222) #27	TCF4 (ENSLAFG00000013449) #28	TXNL1 (ENSLAFG00000009689) #30	WDR7 (ENSLAFG00000015260) #31	ST8SIA3 (ENSLAFG00000017954) #32	ONECUT2 (ENSLAFG00000032649) #33	FECH (ENSLAFG00000000056) #34	NARS1 (ENSLAFG00000000559) #35
Hyrax	MODERN SPECIES	6538																DCC (ENSPCAG00000000173) #22
Tenrec	MODERN SPECIES	7773																DCC (ENSETEG00000013210) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000158867 #22
Sloth	MODERN SPECIES	6958																DCC (ENSCHOG00000003385) #22
Armadillo	MODERN SPECIES	2832																ENSDNOG00000036961 #22	AKR1B10 (ENSDNOG00000036011)	BPGM (ENSDNOG00000004956)	ENSDNOG00000044766	CALD1 (ENSDNOG00000038571)	TMEM140 (ENSDNOG00000015106)	CYREN (ENSDNOG00000015110)	WDR91 (ENSDNOG00000015115)	STRA8 (ENSDNOG00000003328)	ENSDNOG00000033806
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01070000254624	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01070000254624	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00390000018741 #7	ENSGT00950000183010.b ##8	ENSGT00950000183010.a.b.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01070000254624	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.a.a.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01070000254624	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00940000161642 #17	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
koala	MODERN SPECIES	224			ACAA2 (ENSPCIG00000028228) #10	ENSPCIG00000033330 #11	ENSPCIG00000032867 #11	ENSPCIG00000003511	ENSPCIG00000003532	ENSPCIG00000003555	MAPK4 (ENSPCIG00000011553) #16	ENSPCIG00000011548 #17	ME2 (ENSPCIG00000014963) #18	ELAC1 (ENSPCIG00000014958) #19	SMAD4 (ENSPCIG00000014951) #20	MEX3C (ENSPCIG00000031406) #21	ENSPCIG00000036208	DCC (ENSPCIG00000033928) #22
Common wonbat	MODERN SPECIES	1028	SMAD7 (ENSVURG00010000339)	DYM (ENSVURG00010000407)	C18orf32 (ENSVURG00010000458) #7	LIPG (ENSVURG00010000510) #9	ACAA2 (ENSVURG00010000570) #10	MYO5B (ENSVURG00010000687) #11	ENSVURG00010000828	ENSVURG00010000841	ENSVURG00010000853	MAPK4 (ENSVURG00010001000) #16	MRO (ENSVURG00010001023) #17	ME2 (ENSVURG00010001127) #18	ELAC1 (ENSVURG00010001144) #19	SMAD4 (ENSVURG00010001174) #20	MEX3C (ENSVURG00010001250) #21	DCC (ENSVURG00010001452) #22	MBD2 (ENSVURG00010001720) #23	POLI (ENSVURG00010001983) #24	STARD6 (ENSVURG00010002017) #25	ENSVURG00010002151	ENSVURG00010002202	RAB27B (ENSVURG00010002263) #26	CCDC68 (ENSVURG00010002283) #27	TCF4 (ENSVURG00010002348) #28	ENSVURG00010003280	ENSVURG00010003325	TXNL1 (ENSVURG00010003367) #30	WDR7 (ENSVURG00010003473) #31	ST8SIA3 (ENSVURG00010003611) #32	ONECUT2 (ENSVURG00010003616) #33	FECH (ENSVURG00010003679) #34
Wallaby	MODERN SPECIES	9362																DCC (ENSMEUG00000003512) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000030929 #7	ENSSHAG00000003060 ##8	LIPG (ENSSHAG00000004911) #9	ACAA2 (ENSSHAG00000001241) #10	ENSSHAG00000003364 #11	ENSSHAG00000010062	ENSSHAG00000026350	ENSSHAG00000010788	ENSSHAG00000013029 #16	ENSSHAG00000008004 #17	ME2 (ENSSHAG00000014027) #18	ELAC1 (ENSSHAG00000028282) #19	SMAD4 (ENSSHAG00000010344) #20	MEX3C (ENSSHAG00000009408) #21	ENSSHAG00000024378	DCC (ENSSHAG00000012360) #22	ENSSHAG00000029668 #23	POLI (ENSSHAG00000004343) #24	STARD6 (ENSSHAG00000029009) #25	ENSSHAG00000001686	RAB27B (ENSSHAG00000017123) #26	CCDC68 (ENSSHAG00000016955) #27	TCF4 (ENSSHAG00000014955) #28	TXNL1 (ENSSHAG00000005730) #30	WDR7 (ENSSHAG00000002601) #31	ST8SIA3 (ENSSHAG00000029418) #32	ONECUT2 (ENSSHAG00000031060) #33	FECH (ENSSHAG00000017884) #34	NARS1 (ENSSHAG00000017850) #35	ATP8B1 (ENSSHAG00000017716) #37	NEDD4L (ENSSHAG00000016231)
Opossum	MODERN SPECIES	2	ENSMODG00000045710	ENSMODG00000047873	ENSMODG00000050985	ENSMODG00000000306	ENSMODG00000049107	PIK3C3 (ENSMODG00000000219)	ENSMODG00000045630	ENSMODG00000036517	ENSMODG00000044611	RIT2 (ENSMODG00000000206)	SYT4 (ENSMODG00000000187)	ME2 (ENSMODG00000010968) #18	ELAC1 (ENSMODG00000010972) #19	SMAD4 (ENSMODG00000010995) #20	MEX3C (ENSMODG00000011001) #21	DCC (ENSMODG00000011028) #22	MBD2 (ENSMODG00000011041) #23	POLI (ENSMODG00000011046) #24	STARD6 (ENSMODG00000011055) #25	ENSMODG00000025604	ENSMODG00000037484	ENSMODG00000003833 #17	MAPK4 (ENSMODG00000003819) #16	ENSMODG00000003805	ENSMODG00000003795	ENSMODG00000003773	ENSMODG00000043831	MYO5B (ENSMODG00000003753) #11	ACAA2 (ENSMODG00000003595) #10	ENSMODG00000039010	LIPG (ENSMODG00000003564) #9
Platypus	MODERN SPECIES	14	ENSOANG00000007611	DYM (ENSOANG00000007612)	ENSOANG00000002910 ##8	LIPG (ENSOANG00000001131) #9	ACAA2 (ENSOANG00000002559) #10	MYO5B (ENSOANG00000008127) #11	ENSOANG00000008126	ENSOANG00000008125	ENSOANG00000008124	ENSOANG00000045887 #16	ENSOANG00000008122 #17	ME2 (ENSOANG00000008119) #18	ELAC1 (ENSOANG00000008118) #19	SMAD4 (ENSOANG00000008117) #20	ENSOANG00000008116	DCC (ENSOANG00000008115) #22	MBD2 (ENSOANG00000001797) #23	POLI (ENSOANG00000001796) #24	STARD6 (ENSOANG00000041469) #25	C3H18orf54 (ENSOANG00000001795)	ENSOANG00000044861	RAB27B (ENSOANG00000051201) #26	ENSOANG00000031527 #27	ENSOANG00000036676	TCF4 (ENSOANG00000003082) #28	TXNL1 (ENSOANG00000001710) #30	WDR7 (ENSOANG00000001712) #31	ST8SIA3 (ENSOANG00000001713) #32	ONECUT2 (ENSOANG00000001715) #33	FECH (ENSOANG00000001716) #34	NARS1 (ENSOANG00000001717) #35
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Aves	ANCESTRAL SPECIES	4	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Neognathae	ANCESTRAL SPECIES	12	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Golden eagle	MODERN SPECIES	91	C18orf32 (ENSACCG00020016535) #7	RPL17 (ENSACCG00020016537) ##8	LIPG (ENSACCG00020016557) #9	ACAA2 (ENSACCG00020016573) #10	MYO5B (ENSACCG00020016656) #11	ENSACCG00020009495	ENSACCG00020009516	ENSACCG00020009534	MAPK4 (ENSACCG00020009547) #16	ME2 (ENSACCG00020009563) #18	ENSACCG00020009582	ELAC1 (ENSACCG00020009599) #19	SMAD4 (ENSACCG00020009624) #20	MEX3C (ENSACCG00020009646) #21	ENSACCG00020009660	DCC (ENSACCG00020009773) #22	MBD2 (ENSACCG00020009819) #23	POLI (ENSACCG00020009836) #24	STARD6 (ENSACCG00020009847) #25	ENSACCG00020009877	ENSACCG00020009898	RAB27B (ENSACCG00020009910) #26	TCF4 (ENSACCG00020009960) #28	TXNL1 (ENSACCG00020010009) #30	WDR7 (ENSACCG00020010051) #31	ST8SIA3 (ENSACCG00020010073) #32	ONECUT2 (ENSACCG00020010082) #33	FECH (ENSACCG00020010089) #34	NARS1 (ENSACCG00020010122) #35	ATP8B1 (ENSACCG00020010228) #37	NEDD4L (ENSACCG00020010386)
Kakapo	MODERN SPECIES	19	ENSSHBG00005011002	SMAD7 (ENSSHBG00005011025)	DYM (ENSSHBG00005011046)	C18orf32 (ENSSHBG00005011080) #7	ENSSHBG00005011099 #8	LIPG (ENSSHBG00005011192) #9	ACAA2 (ENSSHBG00005011224) #10	MYO5B (ENSSHBG00005011309) #11	ENSSHBG00005011586	ENSSHBG00005011601	MAPK4 (ENSSHBG00005011621) #16	ME2 (ENSSHBG00005011635) #18	ELAC1 (ENSSHBG00005011655) #19	ENSSHBG00005011666 #20	ENSSHBG00005011679 #21	DCC (ENSSHBG00005011789) #22	MBD2 (ENSSHBG00005012233) #23
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129.p #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Anatidae	ANCESTRAL SPECIES	55	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT01030000234969	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129.o.b #28	ENSGT00940000159129.p #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Pink-footed goose	MODERN SPECIES	124		DYM (ENSABRG00000018382)	C18orf32 (ENSABRG00000018400) #7	ENSABRG00000018405 #8	LIPG (ENSABRG00000018414) #9	ACAA2 (ENSABRG00000018424) #10	MYO5B (ENSABRG00000018754) #11	ENSABRG00000020857	ENSABRG00000020860	ENSABRG00000020863	MAPK4 (ENSABRG00000020865) #16	ME2 (ENSABRG00000020867) #18	ELAC1 (ENSABRG00000020869) #19	SMAD4 (ENSABRG00000020871) #20	MEX3C (ENSABRG00000020874) #21	DCC (ENSABRG00000020894) #22	MBD2 (ENSABRG00000020912) #23	POLI (ENSABRG00000020917) #24	STARD6 (ENSABRG00000020923) #25	ENSABRG00000020928	ENSABRG00000020934	RAB27B (ENSABRG00000020939) #26	CCDC68 (ENSABRG00000020946) #27	TCF4 (ENSABRG00000020955) #28	TXNL1 (ENSABRG00000020980) #30	WDR7 (ENSABRG00000020984) #31	ST8SIA3 (ENSABRG00000020992) #32	ONECUT2 (ENSABRG00000020995) #33	FECH (ENSABRG00000020998) #34	NARS1 (ENSABRG00000021002) #35	ATP8B1 (ENSABRG00000021054) #37
Duck	MODERN SPECIES	4281	ENSAPLG00000022343	DYM (ENSAPLG00000007759)	C18orf32 (ENSAPLG00000017090) #7	ENSAPLG00000008451 ##8	LIPG (ENSAPLG00000008809) #9	ACAA2 (ENSAPLG00000006058) #10	MYO5B (ENSAPLG00000005427) #11	ENSAPLG00000005297	ENSAPLG00000004971	ENSAPLG00000004736	MAPK4 (ENSAPLG00000004651) #16	ME2 (ENSAPLG00000004164) #18	ELAC1 (ENSAPLG00000007218) #19	SMAD4 (ENSAPLG00000003924) #20	MEX3C (ENSAPLG00000003916) #21	DCC (ENSAPLG00000009368) #22	MBD2 (ENSAPLG00000010058) #23	POLI (ENSAPLG00000010510) #24	STARD6 (ENSAPLG00000021618) #25	C18orf54 (ENSAPLG00000010526)	ENSAPLG00000030416	RAB27B (ENSAPLG00000023455) #26	CCDC68 (ENSAPLG00000010764) #27	TCF4 (ENSAPLG00000011135) #28	ENSAPLG00000017851 #28	TXNL1 (ENSAPLG00000015099) #30	WDR7 (ENSAPLG00000014993) #31	FECH (ENSAPLG00000015242) #34	ATP8B1 (ENSAPLG00000002575) #37	ENSAPLG00000020951	NEDD4L (ENSAPLG00000008925)
African ostrich	MODERN SPECIES	306	ENSSCUG00000001573	DYM (ENSSCUG00000001566)	C18orf32 (ENSSCUG00000001562) #7	ENSSCUG00000001555 #8	LIPG (ENSSCUG00000001552) #9	ACAA2 (ENSSCUG00000001545) #10	MYO5B (ENSSCUG00000001541) #11	ENSSCUG00000001539	ENSSCUG00000001536	ENSSCUG00000001533	MAPK4 (ENSSCUG00000001532) #16	ME2 (ENSSCUG00000001529) #18	ELAC1 (ENSSCUG00000001521) #19	SMAD4 (ENSSCUG00000001512) #20	MEX3C (ENSSCUG00000001508) #21	DCC (ENSSCUG00000001506) #22	MBD2 (ENSSCUG00000001502) #23	POLI (ENSSCUG00000001500) #24	STARD6 (ENSSCUG00000001499) #25	C18orf54 (ENSSCUG00000001496)	ENSSCUG00000001491	RAB27B (ENSSCUG00000001487) #26	CCDC68 (ENSSCUG00000001483) #27	TCF4 (ENSSCUG00000001476) #28	TXNL1 (ENSSCUG00000001464) #30	ENSSCUG00000001460 #31	ENSSCUG00000001456 #31	ST8SIA3 (ENSSCUG00000001452) #32	FECH (ENSSCUG00000001448) #34	NARS1 (ENSSCUG00000001444) #35	ATP8B1 (ENSSCUG00000001441) #37
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	809																ENSPSIG00000010844 #22
Chinese turtle	MODERN SPECIES	2138	C18orf32 (ENSPSIG00000005560) #7	ENSPSIG00000005516 #8	LIPG (ENSPSIG00000005431) #9	ACAA2 (ENSPSIG00000005335) #10	MYO5B (ENSPSIG00000005153) #11	ENSPSIG00000017286	ENSPSIG00000017234	ENSPSIG00000016894	ENSPSIG00000015886	MAPK4 (ENSPSIG00000015783) #16	ENSPSIG00000015770 #18	ENSPSIG00000015649 #18	ELAC1 (ENSPSIG00000015619) #19	SMAD4 (ENSPSIG00000014614) #20	MEX3C (ENSPSIG00000014521) #21	ENSPSIG00000014508 #22
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873
Three-toed box turtle	MODERN SPECIES	29	DYM (ENSTMTG00000001505)	C18orf32 (ENSTMTG00000001516) #7	ENSTMTG00000001521 ##8	LIPG (ENSTMTG00000001568) #9	ACAA2 (ENSTMTG00000001632) #10	MYO5B (ENSTMTG00000001656) #11	ENSTMTG00000001691	ENSTMTG00000001700	ENSTMTG00000001712	ENSTMTG00000001717	MAPK4 (ENSTMTG00000001722) #16	ME2 (ENSTMTG00000001747) #18	ELAC1 (ENSTMTG00000000045) #19	SMAD4 (ENSTMTG00000000068) #20	MEX3C (ENSTMTG00000000104) #21	DCC (ENSTMTG00000000292) #22	MBD2 (ENSTMTG00000000580) #23	POLI (ENSTMTG00000000593) #24	C18orf54 (ENSTMTG00000000605)	RAB27B (ENSTMTG00000000618) #26	CCDC68 (ENSTMTG00000000639) #27	TCF4 (ENSTMTG00000000670) #28	TXNL1 (ENSTMTG00000000698) #30	ENSTMTG00000000713 #31	ENSTMTG00000000724 #31	ST8SIA3 (ENSTMTG00000000736) #32	ONECUT2 (ENSTMTG00000000742) #33	FECH (ENSTMTG00000000750) #34	NARS1 (ENSTMTG00000000755) #35	ATP8B1 (ENSTMTG00000000778) #37	NEDD4L (ENSTMTG00000000822)
painted turtle	MODERN SPECIES	15	SMAD7 (ENSCPBG00000025649)	DYM (ENSCPBG00000025646)	C18orf32 (ENSCPBG00000025643) #7	ENSCPBG00000025638 #8	LIPG (ENSCPBG00000025633) #9	ACAA2 (ENSCPBG00000025630) #10	MYO5B (ENSCPBG00000025623) #11	ENSCPBG00000025621	ENSCPBG00000025620	ENSCPBG00000025618	MAPK4 (ENSCPBG00000025615) #16	ME2 (ENSCPBG00000025614) #18	ELAC1 (ENSCPBG00000025613) #19	SMAD4 (ENSCPBG00000025612) #20	MEX3C (ENSCPBG00000025611) #21	DCC (ENSCPBG00000025608) #22	MBD2 (ENSCPBG00000025606) #23	ENSCPBG00000025604	POLI (ENSCPBG00000025603) #24	C18orf54 (ENSCPBG00000025602)	ENSCPBG00000025600	RAB27B (ENSCPBG00000025596) #26	CCDC68 (ENSCPBG00000025595) #27	TCF4 (ENSCPBG00000025587) #28	TXNL1 (ENSCPBG00000025577) #30	WDR7 (ENSCPBG00000025566) #31	ST8SIA3 (ENSCPBG00000025559) #32	ONECUT2 (ENSCPBG00000025558) #33	FECH (ENSCPBG00000025557) #34	NARS1 (ENSCPBG00000025555) #35	ATP8B1 (ENSCPBG00000025509) #37
Testudinidae	ANCESTRAL SPECIES	30	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.b ##8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT01030000234969	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973 #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00390000008823	ENSGT00940000157449 #26	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873	ENSGT00940000160524	ENSGT00390000018044.b.a
Goode s thornscrub tortoise	MODERN SPECIES	20	SMAD7 (ENSGEVG00005019841)	DYM (ENSGEVG00005019836)	C18orf32 (ENSGEVG00005019829) #7	ENSGEVG00005019793 ##8	LIPG (ENSGEVG00005019740) #9	ACAA2 (ENSGEVG00005019715) #10	MYO5B (ENSGEVG00005019665) #11	ENSGEVG00005019638	ENSGEVG00005019631	ENSGEVG00005019617	MAPK4 (ENSGEVG00005019610) #16	ME2 (ENSGEVG00005019582) #18	ELAC1 (ENSGEVG00005019575) #19	SMAD4 (ENSGEVG00005019562) #20	MEX3C (ENSGEVG00005019557) #21	DCC (ENSGEVG00005019491) #22	ENSGEVG00005019471	MBD2 (ENSGEVG00005019458) #23	POLI (ENSGEVG00005019445) #24	C18orf54 (ENSGEVG00005019438)	RAB27B (ENSGEVG00005019432) #26	TCF4 (ENSGEVG00005017791) #28	TXNL1 (ENSGEVG00005017445) #30	WDR7 (ENSGEVG00005017398) #31	ST8SIA3 (ENSGEVG00005017359) #32	ONECUT2 (ENSGEVG00005017340) #33	FECH (ENSGEVG00005017318) #34	NARS1 (ENSGEVG00005017281) #35	ATP8B1 (ENSGEVG00005017024) #37	ENSGEVG00005016959	NEDD4L (ENSGEVG00005015391)
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	537																ENSCABG00000008110 #22
Abingdon island giant tortoise	MODERN SPECIES	2051	SCARA3 (ENSCABG00000021066)	CLU (ENSCABG00000021069)	SLC35F6 (ENSCABG00000021074)	KCNK3 (ENSCABG00000021078)	FAM166C (ENSCABG00000021079)	OTOF (ENSCABG00000021084)	DRC1 (ENSCABG00000021101)	ENSCABG00000021131	ENSCABG00000021133	ENSCABG00000021136	ENSCABG00000021139	ENSCABG00000021140	ENSCABG00000021142	ENSCABG00000021145	ENSCABG00000021146	ENSCABG00000021149 #22	ENSCABG00000021151
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
tuatara	MODERN SPECIES	1805	DYM (ENSSPUG00000017251)	C18orf32 (ENSSPUG00000017262) #7	RPL17 (ENSSPUG00000017264) ##8	LIPG (ENSSPUG00000017288) #9	ACAA2 (ENSSPUG00000017306) #10	MYO5B (ENSSPUG00000017329) #11	ENSSPUG00000017366	ENSSPUG00000017375	ENSSPUG00000017384	MAPK4 (ENSSPUG00000017389) #16	ME2 (ENSSPUG00000017432) #18	ELAC1 (ENSSPUG00000017500) #19	SMAD4 (ENSSPUG00000017513) #20	MEX3C (ENSSPUG00000017527) #21	IER3IP1 (ENSSPUG00000017534)	DCC (ENSSPUG00000017554) #22	ENSSPUG00000017567 #23	POLI (ENSSPUG00000017687) #24	C18orf54 (ENSSPUG00000017917)	ENSSPUG00000017944	RAB27B (ENSSPUG00000017954) #26
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37
Common wall lizard	MODERN SPECIES	2	DYM (ENSPMRG00000009531)	C18orf32 (ENSPMRG00000009571) #7	ENSPMRG00000009575 #8	LIPG (ENSPMRG00000009592) #9	ACAA2 (ENSPMRG00000009605) #10	MYO5B (ENSPMRG00000009756) #11	ENSPMRG00000010121	ENSPMRG00000010128	ENSPMRG00000010134	ENSPMRG00000010136	MAPK4 (ENSPMRG00000010141) #16	ME2 (ENSPMRG00000010147) #18	ELAC1 (ENSPMRG00000010152) #19	SMAD4 (ENSPMRG00000010161) #20	MEX3C (ENSPMRG00000010170) #21	DCC (ENSPMRG00000010220) #22	ENSPMRG00000010553	MBD2 (ENSPMRG00000010558) #23	POLI (ENSPMRG00000010577) #24	STARD6 (ENSPMRG00000010581) #25	C18orf54 (ENSPMRG00000010588)	ENSPMRG00000010597	RAB27B (ENSPMRG00000010608) #26	CCDC68 (ENSPMRG00000010618) #27	TCF4 (ENSPMRG00000010643) #28	TXNL1 (ENSPMRG00000010692) #30	WDR7 (ENSPMRG00000010716) #31	ST8SIA3 (ENSPMRG00000010766) #32	ONECUT2 (ENSPMRG00000010772) #33	FECH (ENSPMRG00000010778) #34	NARS1 (ENSPMRG00000010785) #35
Argentine black and white tegu	MODERN SPECIES	34	DYM (ENSSMRG00000016587)	C18orf32 (ENSSMRG00000016584) #7	RPL17 (ENSSMRG00000016581) ##8	LIPG (ENSSMRG00000016580) #9	ACAA2 (ENSSMRG00000016578) #10	MYO5B (ENSSMRG00000016569) #11	ENSSMRG00000016557	ENSSMRG00000016555	ENSSMRG00000016552	MAPK4 (ENSSMRG00000016550) #16	ME2 (ENSSMRG00000016542) #18	ELAC1 (ENSSMRG00000016541) #19	SMAD4 (ENSSMRG00000016533) #20	MEX3C (ENSSMRG00000016531) #21	ENSSMRG00000016529	DCC (ENSSMRG00000016526) #22	MBD2 (ENSSMRG00000016511) #23	POLI (ENSSMRG00000016509) #24	ENSSMRG00000016508	STARD6 (ENSSMRG00000016506) #25	C18orf54 (ENSSMRG00000016505)	RAB27B (ENSSMRG00000016503) #26	CCDC68 (ENSSMRG00000016500) #27	ENSSMRG00000016495	TCF4 (ENSSMRG00000016480) #28	ENSSMRG00000016478	TXNL1 (ENSSMRG00000016477) #30	WDR7 (ENSSMRG00000016474) #31	ENSSMRG00000016473	ST8SIA3 (ENSSMRG00000016471) #32	ONECUT2 (ENSSMRG00000016470) #33
Toxicofera	ANCESTRAL SPECIES	18	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT00940000166139	ENSGT01030000234969	ENSGT00940000159850 #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00390000003755	ENSGT00940000157449 #26	ENSGT00950000183065.C #27	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35
Lizard	MODERN SPECIES	903																ENSACAG00000008602 #22	ENSACAG00000036021	ENSACAG00000043450
Elapidae	ANCESTRAL SPECIES	19	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT01030000234969	ENSGT00940000159850.i #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00940000157449 #26	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873
Indian cobra	MODERN SPECIES	1	DYM (ENSNNAG00000014278)	C18orf32 (ENSNNAG00000014266) #7	ENSNNAG00000014239 #8	LIPG (ENSNNAG00000013974) #9	ACAA2 (ENSNNAG00000013909) #10	MYO5B (ENSNNAG00000013682) #11	ENSNNAG00000013638	ENSNNAG00000013628	ENSNNAG00000013618	MAPK4 (ENSNNAG00000013604) #16	ME2 (ENSNNAG00000013386) #18	ELAC1 (ENSNNAG00000013355) #19	SMAD4 (ENSNNAG00000013239) #20	MEX3C (ENSNNAG00000013225) #21	ENSNNAG00000013210 #21	DCC (ENSNNAG00000012608) #22	MBD2 (ENSNNAG00000012567) #23	POLI (ENSNNAG00000012495) #24	STARD6 (ENSNNAG00000012457) #25	C18orf54 (ENSNNAG00000012379)	RAB27B (ENSNNAG00000012352) #26	ENSNNAG00000011771 #28	ENSNNAG00000011735 #28	TXNL1 (ENSNNAG00000011691) #30	WDR7 (ENSNNAG00000009085) #31	ST8SIA3 (ENSNNAG00000008903) #32	ONECUT2 (ENSNNAG00000008882) #33	FECH (ENSNNAG00000008818) #34	NARS1 (ENSNNAG00000007667) #35	ATP8B1 (ENSNNAG00000007463) #37	NEDD4L (ENSNNAG00000015704)
Elapidae_a	ANCESTRAL SPECIES	24	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT01030000234969	ENSGT00940000159850.i #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00940000157449 #26	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873
Acanthophiinae	ANCESTRAL SPECIES	24	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741 #7	ENSGT00950000183010.a.b.a.b.b.b #8	ENSGT00940000159394 #9	ENSGT01030000234626.D #10	ENSGT00940000155402.a.b #11	ENSGT01030000235140	ENSGT00940000164634	ENSGT01030000234969	ENSGT00940000159850.i #16	ENSGT00950000183134.c.b #18	ENSGT00730000111224 #19	ENSGT00940000157435 #20	ENSGT00940000160973.h #21	ENSGT00940000158867 #22	ENSGT00950000183005.a.b #23	ENSGT00940000159487 #24	ENSGT00940000161788 #25	ENSGT00390000008823	ENSGT00940000157449 #26	ENSGT00940000159129 #28	ENSGT01050000245095	ENSGT00940000156170 #30	ENSGT00940000155301 #31	ENSGT01030000234535.E #32	ENSGT00950000183103.d.a.b #33	ENSGT00390000016258 #34	ENSGT01030000234618.E #35	ENSGT00940000158002 #37	ENSGT00940000156873
Mainland tiger snake	MODERN SPECIES	15	DYM (ENSNSUG00000012943)	C18orf32 (ENSNSUG00000012944) #7	ENSNSUG00000012945 ##8	LIPG (ENSNSUG00000012949) #9	ACAA2 (ENSNSUG00000013087) #10	ENSNSUG00000013090 #11	ENSNSUG00000013091 #11	ENSNSUG00000013092	ENSNSUG00000013093	ENSNSUG00000013094	MAPK4 (ENSNSUG00000013095) #16	ME2 (ENSNSUG00000013096) #18	ELAC1 (ENSNSUG00000013099) #19	SMAD4 (ENSNSUG00000013101) #20	MEX3C (ENSNSUG00000013103) #21	DCC (ENSNSUG00000013107) #22	ENSNSUG00000013111	MBD2 (ENSNSUG00000013112) #23	POLI (ENSNSUG00000013113) #24	STARD6 (ENSNSUG00000013114) #25	C18orf54 (ENSNSUG00000013115)	RAB27B (ENSNSUG00000013116) #26	TCF4 (ENSNSUG00000013120) #28	TXNL1 (ENSNSUG00000013203) #30	WDR7 (ENSNSUG00000013204) #31	ST8SIA3 (ENSNSUG00000013206) #32	ONECUT2 (ENSNSUG00000013207) #33	FECH (ENSNSUG00000013208) #34	NARS1 (ENSNSUG00000013209) #35	ATP8B1 (ENSNSUG00000013746) #37	NEDD4L (ENSNSUG00000013749)
Eastern brown snake	MODERN SPECIES	2	SMAD7 (ENSPTXG00000006582)	DYM (ENSPTXG00000006583)	C18orf32 (ENSPTXG00000006692) #7	ENSPTXG00000006694 #8	LIPG (ENSPTXG00000006699) #9	ACAA2 (ENSPTXG00000006871) #10	MYO5B (ENSPTXG00000006873) #11	ENSPTXG00000017817	ENSPTXG00000017818	ENSPTXG00000017819	MAPK4 (ENSPTXG00000017820) #16	ME2 (ENSPTXG00000017821) #18	ELAC1 (ENSPTXG00000017822) #19	SMAD4 (ENSPTXG00000017823) #20	MEX3C (ENSPTXG00000017824) #21	DCC (ENSPTXG00000017825) #22	MBD2 (ENSPTXG00000017827) #23	POLI (ENSPTXG00000017828) #24	ENSPTXG00000017829	C18orf54 (ENSPTXG00000017830)	RAB27B (ENSPTXG00000017831) #26	TCF4 (ENSPTXG00000017832) #28	ENSPTXG00000017834	TXNL1 (ENSPTXG00000017835) #30	WDR7 (ENSPTXG00000017836) #31	ST8SIA3 (ENSPTXG00000017837) #32	FECH (ENSPTXG00000017838) #34	NARS1 (ENSPTXG00000017839) #35	ATP8B1 (ENSPTXG00000017843) #37	NEDD4L (ENSPTXG00000017848)	MALT1 (ENSPTXG00000017849)
Blue-lipped sea krait	MODERN SPECIES	3777																ENSLLTG00000003293 #22