Theria ANCESTRAL SPECIES 11 ENSGT00940000159872 ENSGT00390000008772 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01070000254624 ENSGT01030000234969 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Eutheria ANCESTRAL SPECIES 20 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Boreoeutheria ANCESTRAL SPECIES 22 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Euarchontoglires ANCESTRAL SPECIES 22 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Primates ANCESTRAL SPECIES 24 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Haplorrhini ANCESTRAL SPECIES 25 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Simiiformes ANCESTRAL SPECIES 24 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Platyrrhini ANCESTRAL SPECIES 26 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.c ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000154430.e.a #21 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301.t ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 ENSGT01030000234618.E Mas night monkey MODERN SPECIES 714 ENSANAG00000031776 #15 MRO (ENSANAG00000033105) #16 ME2 (ENSANAG00000024499) #17 ELAC1 (ENSANAG00000035626) #18 SMAD4 (ENSANAG00000025293) #19 MEX3C (ENSANAG00000031189) #20 ENSANAG00000020330 #21 DCC (ENSANAG00000025332) #22 MBD2 (ENSANAG00000030070) #23 POLI (ENSANAG00000024794) #24 STARD6 (ENSANAG00000025071) #25 C18orf54 (ENSANAG00000027978) #26 DYNAP (ENSANAG00000027647) #27 ENSANAG00000019712 #28 RAB27B (ENSANAG00000025096) #29 CCDC68 (ENSANAG00000025839) #30 TCF4 (ENSANAG00000031962) #31 Cebidae ANCESTRAL SPECIES 28 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.c ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000154430.e.a #21 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301.t ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 ENSGT01030000234618.E Marmoset MODERN SPECIES 4 ENSCJAG00000073947 ACAA2 (ENSCJAG00000004820) MYO5B (ENSCJAG00000004857) CFAP53 (ENSCJAG00000004928) MBD1 (ENSCJAG00000004959) ##23 ENSCJAG00000005044 SKA1 (ENSCJAG00000084830) ENSCJAG00000086150 MAPK4 (ENSCJAG00000001974) ME2 (ENSCJAG00000001929) #17 MRO (ENSCJAG00000041277) #16 ELAC1 (ENSCJAG00000001925) #18 SMAD4 (ENSCJAG00000001910) #19 MEX3C (ENSCJAG00000072158) #20 ENSCJAG00000084840 DCC (ENSCJAG00000001868) #22 MBD2 (ENSCJAG00000040234) #23 POLI (ENSCJAG00000001851) #24 ENSCJAG00000070038 ENSCJAG00000034626 C18orf54 (ENSCJAG00000001841) #26 ENSCJAG00000086244 #27 DYNAP (ENSCJAG00000004179) #27 RAB27B (ENSCJAG00000004175) #29 CCDC68 (ENSCJAG00000004164) #30 ENSCJAG00000086874 TCF4 (ENSCJAG00000004038) #31 TXNL1 (ENSCJAG00000004012) ENSCJAG00000034961 WDR7 (ENSCJAG00000003937) ST8SIA3 (ENSCJAG00000003917) Cebidae_a ANCESTRAL SPECIES 23 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.c ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000154430.e.a #21 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301.t ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 ENSGT01030000234618.E Bolivian squirrel monkey MODERN SPECIES 58 ACAA2 (ENSSBOG00000029056) MYO5B (ENSSBOG00000024887) MBD1 (ENSSBOG00000027169) ##23 CXXC1 (ENSSBOG00000020380) ENSSBOG00000029260 MAPK4 (ENSSBOG00000034699) MRO (ENSSBOG00000029231) #16 ENSSBOG00000032219 ME2 (ENSSBOG00000021989) #17 ELAC1 (ENSSBOG00000019881) #18 SMAD4 (ENSSBOG00000029676) #19 MEX3C (ENSSBOG00000024094) #20 ENSSBOG00000025727 #21 ENSSBOG00000017363 ENSSBOG00000032319 DCC (ENSSBOG00000032419) #22 MBD2 (ENSSBOG00000011611) #23 POLI (ENSSBOG00000025500) #24 ENSSBOG00000025779 STARD6 (ENSSBOG00000020117) #25 C18orf54 (ENSSBOG00000026155) #26 DYNAP (ENSSBOG00000032272) #27 RAB27B (ENSSBOG00000032536) #29 CCDC68 (ENSSBOG00000036015) #30 TCF4 (ENSSBOG00000021853) #31 TXNL1 (ENSSBOG00000028008) WDR7 (ENSSBOG00000031603) ST8SIA3 (ENSSBOG00000031460) ONECUT2 (ENSSBOG00000031074) ENSSBOG00000029218 FECH (ENSSBOG00000021150) Capuchin MODERN SPECIES 278 DCC (ENSCCAG00000011712) #22 ENSCCAG00000019812 MBD2 (ENSCCAG00000037922) #23 POLI (ENSCCAG00000037034) #24 ENSCCAG00000025537 STARD6 (ENSCCAG00000020754) #25 C18orf54 (ENSCCAG00000022668) #26 DYNAP (ENSCCAG00000029558) #27 Catarrhini ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Hominoidea ANCESTRAL SPECIES 24 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ENSGT00940000159394 ENSGT01030000234626.D.k ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Hominidae ANCESTRAL SPECIES 24 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ENSGT00940000159394 ENSGT01030000234626.D.k ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Homo/Pan/Gorilla group ANCESTRAL SPECIES 26 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00940000159394 ENSGT01030000234626.D.k ENSGT00940000155402.a.b.gb ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Gorilla MODERN SPECIES 9 RPL17 (ENSGGOG00000026697) LIPG (ENSGGOG00000000595) ACAA2 (ENSGGOG00000012552) MYO5B (ENSGGOG00000008585) MBD1 (ENSGGOG00000016966) ##23 CXXC1 (ENSGGOG00000016976) SKA1 (ENSGGOG00000016643) MAPK4 (ENSGGOG00000010469) MRO (ENSGGOG00000027618) #16 ME2 (ENSGGOG00000010823) #17 ELAC1 (ENSGGOG00000002624) #18 SMAD4 (ENSGGOG00000013662) #19 ENSGGOG00000036220 ENSGGOG00000014875 #20 ENSGGOG00000025730 DCC (ENSGGOG00000007343) #22 MBD2 (ENSGGOG00000013402) #23 POLI (ENSGGOG00000014321) #24 STARD6 (ENSGGOG00000007234) #25 ENSGGOG00000028549 #25 C18orf54 (ENSGGOG00000001490) #26 ENSGGOG00000036639 DYNAP (ENSGGOG00000010826) #27 RAB27B (ENSGGOG00000015655) #29 CCDC68 (ENSGGOG00000022410) #30 TCF4 (ENSGGOG00000016297) #31 TXNL1 (ENSGGOG00000009301) WDR7 (ENSGGOG00000002885) BOD1L2 (ENSGGOG00000026864) ST8SIA3 (ENSGGOG00000042477) ENSGGOG00000024651 Homo/Pan group ANCESTRAL SPECIES 25 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00940000159394 ENSGT01030000234626.D.k ENSGT00940000155402.a.b.gb ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00510000046985.h.a ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 Human MODERN SPECIES 9 RPL17-C18orf32 (ENSG00000215472) RPL17 (ENSG00000265681) LIPG (ENSG00000101670) ACAA2 (ENSG00000167315) MYO5B (ENSG00000167306) CFAP53 (ENSG00000172361) MBD1 (ENSG00000141644) ##23 CXXC1 (ENSG00000154832) SKA1 (ENSG00000154839) MAPK4 (ENSG00000141639) MRO (ENSG00000134042) #16 ME2 (ENSG00000082212) #17 ELAC1 (ENSG00000141642) #18 SMAD4 (ENSG00000141646) #19 MEX3C (ENSG00000176624) #20 DCC (ENSG00000187323) #22 MBD2 (ENSG00000134046) #23 POLI (ENSG00000101751) #24 STARD6 (ENSG00000174448) #25 C18orf54 (ENSG00000166845) #26 DYNAP (ENSG00000178690) #27 RAB27B (ENSG00000041353) #29 CCDC68 (ENSG00000166510) #30 TCF4 (ENSG00000196628) #31 TXNL1 (ENSG00000091164) WDR7 (ENSG00000091157) BOD1L2 (ENSG00000228075) ST8SIA3 (ENSG00000177511) ONECUT2 (ENSG00000119547) FECH (ENSG00000066926) NARS1 (ENSG00000134440) Pan ANCESTRAL SPECIES 24 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00390000013264.c.a ENSGT00940000159394 ENSGT01030000234626.D.k ENSGT00940000155402.a.b.gb ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Bonobo MODERN SPECIES 9 ENSPPAG00000028848 ENSPPAG00000032490 LIPG (ENSPPAG00000034597) ACAA2 (ENSPPAG00000039219) MYO5B (ENSPPAG00000042788) CFAP53 (ENSPPAG00000035491) MBD1 (ENSPPAG00000038886) ##23 CXXC1 (ENSPPAG00000028863) SKA1 (ENSPPAG00000035202) MAPK4 (ENSPPAG00000009556) MRO (ENSPPAG00000039840) #16 ME2 (ENSPPAG00000036244) #17 ELAC1 (ENSPPAG00000036817) #18 SMAD4 (ENSPPAG00000027913) #19 ENSPPAG00000038467 #20 DCC (ENSPPAG00000036460) #22 ENSPPAG00000030303 #23 POLI (ENSPPAG00000033244) #24 STARD6 (ENSPPAG00000029738) #25 C18orf54 (ENSPPAG00000015106) #26 ENSPPAG00000037542 RAB27B (ENSPPAG00000038458) #29 CCDC68 (ENSPPAG00000027404) #30 ENSPPAG00000036151 #31 TXNL1 (ENSPPAG00000036223) WDR7 (ENSPPAG00000042765) BOD1L2 (ENSPPAG00000041535) ST8SIA3 (ENSPPAG00000025859) ENSPPAG00000034611 ENSPPAG00000012630 FECH (ENSPPAG00000028098) Chimpanzee MODERN SPECIES 9 RPL17 (ENSPTRG00000010012) ENSPTRG00000043609 LIPG (ENSPTRG00000010015) ACAA2 (ENSPTRG00000010016) MYO5B (ENSPTRG00000010019) CFAP53 (ENSPTRG00000010020) MBD1 (ENSPTRG00000010021) ##23 CXXC1 (ENSPTRG00000010022) SKA1 (ENSPTRG00000010023) MAPK4 (ENSPTRG00000010024) MRO (ENSPTRG00000010025) #16 ME2 (ENSPTRG00000010026) #17 ELAC1 (ENSPTRG00000010027) #18 SMAD4 (ENSPTRG00000010028) #19 MEX3C (ENSPTRG00000010029) #20 DCC (ENSPTRG00000010031) #22 MBD2 (ENSPTRG00000010033) #23 POLI (ENSPTRG00000010034) #24 STARD6 (ENSPTRG00000010035) #25 C18H18orf54 (ENSPTRG00000010036) #26 ENSPTRG00000042762 DYNAP (ENSPTRG00000010037) #27 RAB27B (ENSPTRG00000010038) #29 CCDC68 (ENSPTRG00000010039) #30 TCF4 (ENSPTRG00000010040) #31 TXNL1 (ENSPTRG00000010041) WDR7 (ENSPTRG00000010042) BOD1L2 (ENSPTRG00000041583) ST8SIA3 (ENSPTRG00000049302) ONECUT2 (ENSPTRG00000010044) ENSPTRG00000049370 Orangutan MODERN SPECIES 9 ENSPPYG00000009151 LIPG (ENSPPYG00000009153) ACAA2 (ENSPPYG00000009154) MYO5B (ENSPPYG00000009155) CFAP53 (ENSPPYG00000009157) MBD1 (ENSPPYG00000009158) ##23 CXXC1 (ENSPPYG00000031882) SKA1 (ENSPPYG00000009159) MAPK4 (ENSPPYG00000009161) ENSPPYG00000041514 MRO (ENSPPYG00000030050) #16 ME2 (ENSPPYG00000009163) #17 ELAC1 (ENSPPYG00000029936) #18 SMAD4 (ENSPPYG00000009165) #19 MEX3C (ENSPPYG00000038962) #20 DCC (ENSPPYG00000009166) #22 MBD2 (ENSPPYG00000009168) #23 POLI (ENSPPYG00000009169) #24 STARD6 (ENSPPYG00000009170) #25 C18orf54 (ENSPPYG00000009171) #26 ENSPPYG00000040268 #27 DYNAP (ENSPPYG00000009172) #27 RAB27B (ENSPPYG00000009173) #29 CCDC68 (ENSPPYG00000009174) #30 TCF4 (ENSPPYG00000009175) #31 TXNL1 (ENSPPYG00000009178) WDR7 (ENSPPYG00000009179) ENSPPYG00000039176 ST8SIA3 (ENSPPYG00000009180) ONECUT2 (ENSPPYG00000009181) FECH (ENSPPYG00000009182) Gibbon MODERN SPECIES 19 ENSNLEG00000029836 ENSNLEG00000034341 LIPG (ENSNLEG00000011556) ACAA2 (ENSNLEG00000011576) MYO5B (ENSNLEG00000011609) CFAP53 (ENSNLEG00000011645) ENSNLEG00000011661 ##23 CXXC1 (ENSNLEG00000011746) SKA1 (ENSNLEG00000011804) MAPK4 (ENSNLEG00000011809) ENSNLEG00000011826 #16 ME2 (ENSNLEG00000011833) #17 ELAC1 (ENSNLEG00000011855) #18 SMAD4 (ENSNLEG00000011859) #19 ENSNLEG00000029756 #20 DCC (ENSNLEG00000011879) #22 ENSNLEG00000031955 #23 POLI (ENSNLEG00000011903) #24 STARD6 (ENSNLEG00000011931) #25 DYNAP (ENSNLEG00000007968) #27 RAB27B (ENSNLEG00000007971) #29 CCDC68 (ENSNLEG00000007972) #30 TCF4 (ENSNLEG00000007981) #31 TXNL1 (ENSNLEG00000008009) WDR7 (ENSNLEG00000008020) BOD1L2 (ENSNLEG00000027541) ST8SIA3 (ENSNLEG00000030534) ENSNLEG00000008061 ENSNLEG00000031671 FECH (ENSNLEG00000008062) NARS1 (ENSNLEG00000008082) Cercopithecidae ANCESTRAL SPECIES 25 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT00940000154979.s.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Cercopithecinae ANCESTRAL SPECIES 22 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170.e ENSGT00940000155301 ENSGT00940000154979.s.b.a ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00910000147117 ENSGT00390000016258 Cercopithecinae_a ANCESTRAL SPECIES 21 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT01020000230346.E.s.b.b ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183541 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170.e ENSGT00940000155301 ENSGT00940000154979.s.b.a ENSGT01030000234535.E ENSGT00910000148258 ENSGT00950000183103.d.a.b Macaca ANCESTRAL SPECIES 22 ENSGT00950000183010.a.a.a.b.a.a.a.a.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT01020000230346.E.s.b.b ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183541 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170.e ENSGT00940000155301 ENSGT00940000154979.s.b.a ENSGT01030000234535.E ENSGT00910000148258 ENSGT00950000183103.d.a.b Macaca_a ANCESTRAL SPECIES 21 ENSGT00940000155478.r ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00390000004856.w.a.a.b.b.a.b.b.a.b ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183541 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170.e ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Crab-eating macaque MODERN SPECIES 9 MBD1 (ENSMFAG00000026335) ##23 CXXC1 (ENSMFAG00000040503) ENSMFAG00000056437 SKA1 (ENSMFAG00000000025) ENSMFAG00000011076 ENSMFAG00000036294 MRO (ENSMFAG00000050667) #16 ME2 (ENSMFAG00000004061) #17 ELAC1 (ENSMFAG00000004789) #18 SMAD4 (ENSMFAG00000037003) #19 MEX3C (ENSMFAG00000056117) #20 ENSMFAG00000060015 ENSMFAG00000053354 ENSMFAG00000042123 ENSMFAG00000055405 DCC (ENSMFAG00000033415) #22 ENSMFAG00000063986 ENSMFAG00000059397 ENSMFAG00000051166 ENSMFAG00000062197 MBD2 (ENSMFAG00000030736) #23 POLI (ENSMFAG00000011788) #24 ENSMFAG00000057960 STARD6 (ENSMFAG00000046022) #25 C18orf54 (ENSMFAG00000038588) #26 DYNAP (ENSMFAG00000034603) #27 RAB27B (ENSMFAG00000002806) #29 ENSMFAG00000051025 CCDC68 (ENSMFAG00000032372) #30 TCF4 (ENSMFAG00000036909) #31 ENSMFAG00000059413 Rhesus MODERN SPECIES 9 CXXC1 (ENSMMUG00000009051) ENSMMUG00000049659 SKA1 (ENSMMUG00000000719) ENSMMUG00000063161 MAPK4 (ENSMMUG00000017290) MRO (ENSMMUG00000022472) #16 ME2 (ENSMMUG00000022001) #17 ELAC1 (ENSMMUG00000003127) #18 SMAD4 (ENSMMUG00000018334) #19 MEX3C (ENSMMUG00000023652) #20 ENSMMUG00000055836 ENSMMUG00000050881 ENSMMUG00000051621 ENSMMUG00000004431 ENSMMUG00000054260 DCC (ENSMMUG00000013999) #22 ENSMMUG00000059274 MBD2 (ENSMMUG00000003136) #23 ENSMMUG00000050079 POLI (ENSMMUG00000010911) #24 STARD6 (ENSMMUG00000010913) #25 ENSMMUG00000059012 C18H18orf54 (ENSMMUG00000010914) #26 ENSMMUG00000061695 ENSMMUG00000056385 #27 DYNAP (ENSMMUG00000013356) #27 RAB27B (ENSMMUG00000040524) #29 CCDC68 (ENSMMUG00000021598) #30 TCF4 (ENSMMUG00000012001) #31 ENSMMUG00000064753 ENSMMUG00000060128 Pig-tailed macaque MODERN SPECIES 155 ENSMNEG00000035945 LIPG (ENSMNEG00000043610) ACAA2 (ENSMNEG00000037789) MYO5B (ENSMNEG00000033529) CFAP53 (ENSMNEG00000015915) MBD1 (ENSMNEG00000038822) ##23 CXXC1 (ENSMNEG00000028715) SKA1 (ENSMNEG00000029687) MAPK4 (ENSMNEG00000038618) ENSMNEG00000000269 MRO (ENSMNEG00000033026) #16 ME2 (ENSMNEG00000034912) #17 ELAC1 (ENSMNEG00000034310) #18 SMAD4 (ENSMNEG00000030827) #19 MEX3C (ENSMNEG00000037450) #20 DCC (ENSMNEG00000044541) #22 MBD2 (ENSMNEG00000028536) #23 POLI (ENSMNEG00000041620) #24 STARD6 (ENSMNEG00000034811) #25 C18orf54 (ENSMNEG00000004827) #26 Cercopithecinae_b ANCESTRAL SPECIES 25 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183541 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170.e ENSGT00940000155301 ENSGT00940000154979.s.b.a ENSGT01030000234535.E ENSGT00910000148258 ENSGT00950000183103.d.a.b Cercopithecinae_d ANCESTRAL SPECIES 40 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT01020000230346.E.s.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a.b ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b.o #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 Drill MODERN SPECIES 403 DCC (ENSMLEG00000010190) #22 Sooty mangabey MODERN SPECIES 190 LIPG (ENSCATG00000033603) ACAA2 (ENSCATG00000031450) MYO5B (ENSCATG00000038137) CFAP53 (ENSCATG00000026928) MBD1 (ENSCATG00000029959) ##23 CXXC1 (ENSCATG00000035708) SKA1 (ENSCATG00000039979) ENSCATG00000033940 ENSCATG00000017689 MAPK4 (ENSCATG00000016401) MRO (ENSCATG00000041212) #16 ME2 (ENSCATG00000034688) #17 ELAC1 (ENSCATG00000036385) #18 SMAD4 (ENSCATG00000041132) #19 MEX3C (ENSCATG00000031557) #20 DCC (ENSCATG00000021673) #22 MBD2 (ENSCATG00000040536) #23 POLI (ENSCATG00000033055) #24 STARD6 (ENSCATG00000031540) #25 C18orf54 (ENSCATG00000032627) #26 Olive baboon MODERN SPECIES 10 ENSPANG00000037588 C18orf32 (ENSPANG00000040941) ENSPANG00000031295 LIPG (ENSPANG00000024235) ACAA2 (ENSPANG00000002878) MYO5B (ENSPANG00000022089) MBD1 (ENSPANG00000010867) ##23 CXXC1 (ENSPANG00000009435) SKA1 (ENSPANG00000030336) MAPK4 (ENSPANG00000009483) MRO (ENSPANG00000011894) #16 ME2 (ENSPANG00000016868) #17 ELAC1 (ENSPANG00000026392) #18 SMAD4 (ENSPANG00000024703) #19 MEX3C (ENSPANG00000006226) #20 DCC (ENSPANG00000006451) #22 ENSPANG00000037100 ENSPANG00000045144 ENSPANG00000043603 MBD2 (ENSPANG00000021858) #23 ENSPANG00000051300 POLI (ENSPANG00000006450) #24 STARD6 (ENSPANG00000032987) #25 C18orf54 (ENSPANG00000007505) #26 DYNAP (ENSPANG00000017680) #27 RAB27B (ENSPANG00000003498) #29 CCDC68 (ENSPANG00000007435) #30 TCF4 (ENSPANG00000009840) #31 TXNL1 (ENSPANG00000005885) WDR7 (ENSPANG00000006224) ENSPANG00000039328 Vervet Monkey MODERN SPECIES 9 LIPG (ENSCSAG00000018043) ACAA2 (ENSCSAG00000018054) MYO5B (ENSCSAG00000018060) CFAP53 (ENSCSAG00000018065) MBD1 (ENSCSAG00000018070) ##23 CXXC1 (ENSCSAG00000018072) SKA1 (ENSCSAG00000018076) ENSCSAG00000018568 MAPK4 (ENSCSAG00000018078) MRO (ENSCSAG00000018082) #16 ME2 (ENSCSAG00000018086) #17 ELAC1 (ENSCSAG00000018090) #18 ENSCSAG00000018091 SMAD4 (ENSCSAG00000018094) #19 MEX3C (ENSCSAG00000018097) #20 DCC (ENSCSAG00000018101) #22 MBD2 (ENSCSAG00000018106) #23 POLI (ENSCSAG00000018108) #24 STARD6 (ENSCSAG00000018111) #25 C18orf54 (ENSCSAG00000018117) #26 DYNAP (ENSCSAG00000018120) #27 RAB27B (ENSCSAG00000018126) #29 CCDC68 (ENSCSAG00000018134) #30 TCF4 (ENSCSAG00000018141) #31 TXNL1 (ENSCSAG00000018145) WDR7 (ENSCSAG00000018146) BOD1L2 (ENSCSAG00000018567) ST8SIA3 (ENSCSAG00000018147) ENSCSAG00000018566 ONECUT2 (ENSCSAG00000018149) FECH (ENSCSAG00000018150) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000158867 #22 Black snub-nosed monkey MODERN SPECIES 1551 RFT1 (ENSRBIG00000009631) PRKCD (ENSRBIG00000035334) TKT (ENSRBIG00000031974) DCP1A (ENSRBIG00000032220) ENSRBIG00000014675 CACNA1D (ENSRBIG00000034562) CHDH (ENSRBIG00000019361) IL17RB (ENSRBIG00000041350) ACTR8 (ENSRBIG00000037649) SELENOK (ENSRBIG00000042324) DCC (ENSRBIG00000038057) #22 ENSRBIG00000030352 Golden snub-nosed monkey MODERN SPECIES 594 DCC (ENSRROG00000028105) #22 Tarsier MODERN SPECIES 3381 DCC (ENSTSYG00000001314) #22 Strepsirrhini ANCESTRAL SPECIES 22 ENSGT00390000018741.s ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Lemuriformes ANCESTRAL SPECIES 25 ENSGT00390000018741.s ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.e ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Mouse lemur MODERN SPECIES 10 ENSMICG00000017102 LIPG (ENSMICG00000017104) ACAA2 (ENSMICG00000005278) MYO5B (ENSMICG00000005287) CFAP53 (ENSMICG00000006410) MBD1 (ENSMICG00000006414) ##23 CXXC1 (ENSMICG00000006424) SKA1 (ENSMICG00000006429) MAPK4 (ENSMICG00000015044) MRO (ENSMICG00000008008) #16 ENSMICG00000045071 ENSMICG00000017523 #17 ELAC1 (ENSMICG00000017524) #18 SMAD4 (ENSMICG00000017525) #19 MEX3C (ENSMICG00000005815) #20 DCC (ENSMICG00000003408) #22 MBD2 (ENSMICG00000008970) #23 POLI (ENSMICG00000008976) #24 STARD6 (ENSMICG00000012563) #25 C18orf54 (ENSMICG00000029715) #26 ENSMICG00000046521 DYNAP (ENSMICG00000015413) #27 RAB27B (ENSMICG00000015440) #29 CCDC68 (ENSMICG00000015449) #30 TCF4 (ENSMICG00000012305) #31 ENSMICG00000026597 TXNL1 (ENSMICG00000034326) WDR7 (ENSMICG00000017318) ST8SIA3 (ENSMICG00000003063) ONECUT2 (ENSMICG00000003067) FECH (ENSMICG00000003069) Lemuriformes_a ANCESTRAL SPECIES 62 ENSGT00390000018741.s ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.e ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Greater bamboo lemur MODERN SPECIES 606 ENSPSMG00000018846 ENSPSMG00000018857 LIPG (ENSPSMG00000018901) ACAA2 (ENSPSMG00000018945) MYO5B (ENSPSMG00000019098) CFAP53 (ENSPSMG00000019120) MBD1 (ENSPSMG00000019377) ##23 CXXC1 (ENSPSMG00000019839) SKA1 (ENSPSMG00000019864) MAPK4 (ENSPSMG00000019888) MRO (ENSPSMG00000019937) #16 ME2 (ENSPSMG00000020268) #17 ENSPSMG00000020513 SMAD4 (ENSPSMG00000020569) #19 MEX3C (ENSPSMG00000020603) #20 DCC (ENSPSMG00000020751) #22 Coquerels sifaka MODERN SPECIES 512 CFAP53 (ENSPCOG00000018350) MBD1 (ENSPCOG00000012450) ##23 CXXC1 (ENSPCOG00000019730) ENSPCOG00000014158 MAPK4 (ENSPCOG00000023971) MRO (ENSPCOG00000027267) #16 ME2 (ENSPCOG00000021599) #17 ELAC1 (ENSPCOG00000026213) #18 SMAD4 (ENSPCOG00000024716) #19 MEX3C (ENSPCOG00000027054) #20 ENSPCOG00000026622 #22 MBD2 (ENSPCOG00000013359) #23 POLI (ENSPCOG00000022543) #24 STARD6 (ENSPCOG00000014244) #25 C18orf54 (ENSPCOG00000020877) #26 DYNAP (ENSPCOG00000026854) #27 RAB27B (ENSPCOG00000011474) #29 CCDC68 (ENSPCOG00000014000) #30 TCF4 (ENSPCOG00000019229) #31 ENSPCOG00000015466 TXNL1 (ENSPCOG00000014144) WDR7 (ENSPCOG00000024980) ST8SIA3 (ENSPCOG00000016338) ONECUT2 (ENSPCOG00000022214) FECH (ENSPCOG00000017751) NARS1 (ENSPCOG00000020832) Bushbaby MODERN SPECIES 127 DYM (ENSOGAG00000013935) ENSOGAG00000029213 LIPG (ENSOGAG00000016524) ACAA2 (ENSOGAG00000016527) MYO5B (ENSOGAG00000016529) ENSOGAG00000003781 MBD1 (ENSOGAG00000003784) ##23 CXXC1 (ENSOGAG00000033715) SKA1 (ENSOGAG00000016657) MAPK4 (ENSOGAG00000016663) MRO (ENSOGAG00000016668) #16 ME2 (ENSOGAG00000010482) #17 ELAC1 (ENSOGAG00000012076) #18 SMAD4 (ENSOGAG00000012081) #19 MEX3C (ENSOGAG00000030858) #20 DCC (ENSOGAG00000010546) #22 Euarchontoglires_A ANCESTRAL SPECIES 22 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Glires ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Rodentia ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Rodentia_B ANCESTRAL SPECIES 27 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Myomorpha ANCESTRAL SPECIES 35 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Muroidea ANCESTRAL SPECIES 13 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 Muroidea_A ANCESTRAL SPECIES 18 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 Cricetidae ANCESTRAL SPECIES 18 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A Northern American deer mouse MODERN SPECIES 10 ENSPEMG00000028900 ENSPEMG00000025726 Acaa2 (ENSPEMG00000022034) Myo5b (ENSPEMG00000020539) Cfap53 (ENSPEMG00000024092) Mbd1 (ENSPEMG00000022630) ##23 Cxxc1 (ENSPEMG00000022532) Ska1 (ENSPEMG00000021084) Mapk4 (ENSPEMG00000023783) Mro (ENSPEMG00000022802) #16 Me2 (ENSPEMG00000031101) #17 Elac1 (ENSPEMG00000002394) #18 Smad4 (ENSPEMG00000013699) #19 ENSPEMG00000022227 #20 ENSPEMG00000003058 Dcc (ENSPEMG00000020947) #22 Mbd2 (ENSPEMG00000020730) #23 Poli (ENSPEMG00000016273) #24 Stard6 (ENSPEMG00000020516) #25 ENSPEMG00000030755 4930503L19Rik (ENSPEMG00000011941) #26 Dynap (ENSPEMG00000020998) Rab27b (ENSPEMG00000028957) #29 Ccdc68 (ENSPEMG00000021062) #30 Tcf4 (ENSPEMG00000013345) #31 Mc2r (ENSPEMG00000030436) Mc5r (ENSPEMG00000027856) Rnmt (ENSPEMG00000022773) Fam210a (ENSPEMG00000020500) Ldlrad4 (ENSPEMG00000009004) Cep192 (ENSPEMG00000022380) Prairie vole MODERN SPECIES 5 BC031181 (ENSMOCG00000012446) Rpl17 (ENSMOCG00000012741) Lipg (ENSMOCG00000020738) Acaa2 (ENSMOCG00000004236) Myo5b (ENSMOCG00000022368) ENSMOCG00000008152 ENSMOCG00000011976 ##23 Cxxc1 (ENSMOCG00000018819) Ska1 (ENSMOCG00000000860) Mapk4 (ENSMOCG00000017622) Mro (ENSMOCG00000001134) #16 ENSMOCG00000019370 #17 Elac1 (ENSMOCG00000013625) #18 Smad4 (ENSMOCG00000014880) #19 Mex3c (ENSMOCG00000012424) #20 Dcc (ENSMOCG00000002873) #22 ENSMOCG00000002868 Mbd2 (ENSMOCG00000016997) #23 Poli (ENSMOCG00000018932) #24 Stard6 (ENSMOCG00000022986) #25 ENSMOCG00000013893 #26 Dynap (ENSMOCG00000013696) Rab27b (ENSMOCG00000017027) #29 Ccdc68 (ENSMOCG00000021806) #30 ENSMOCG00000016473 #31 Mc2r (ENSMOCG00000002000) Mc5r (ENSMOCG00000014761) Rnmt (ENSMOCG00000011156) Fam210a (ENSMOCG00000020914) Ldlrad4 (ENSMOCG00000016058) Cep192 (ENSMOCG00000018904) Cricetinae ANCESTRAL SPECIES 14 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A Chinese hamster chok1gshd MODERN SPECIES 153 BC031181 (ENSCGRG00001018350) Rpl17 (ENSCGRG00001020137) Lipg (ENSCGRG00001017705) Acaa2 (ENSCGRG00001003556) Myo5b (ENSCGRG00001023182) ENSCGRG00001020552 Mbd1 (ENSCGRG00001014843) ##23 Cxxc1 (ENSCGRG00001024166) Ska1 (ENSCGRG00001004278) Mapk4 (ENSCGRG00001013070) Mro (ENSCGRG00001020055) #16 Me2 (ENSCGRG00001023816) #17 Elac1 (ENSCGRG00001008766) #18 Smad4 (ENSCGRG00001022246) #19 Mex3c (ENSCGRG00001014162) #20 Dcc (ENSCGRG00001019199) #22 ENSCGRG00001004249 Mbd2 (ENSCGRG00001017384) #23 Poli (ENSCGRG00001024509) #24 4930503L19Rik (ENSCGRG00001010669) #26 Dynap (ENSCGRG00001023476) Rab27b (ENSCGRG00001006027) #29 Ccdc68 (ENSCGRG00001016970) #30 Tcf4 (ENSCGRG00001010425) #31 Mc2r (ENSCGRG00001008067) Mc5r (ENSCGRG00001008528) Rnmt (ENSCGRG00001024115) Fam210a (ENSCGRG00001013093) Ldlrad4 (ENSCGRG00001021830) Cep192 (ENSCGRG00001007358) ENSCGRG00001002019 Golden Hamster MODERN SPECIES 665 Mro (ENSMAUG00000012639) #16 ENSMAUG00000008737 #17 Smad4 (ENSMAUG00000009716) #19 Mex3c (ENSMAUG00000016546) #20 Dcc (ENSMAUG00000009021) #22 ENSMAUG00000011525 Mbd2 (ENSMAUG00000013342) #23 Poli (ENSMAUG00000012508) #24 ENSMAUG00000009525 #25 4930503L19Rik (ENSMAUG00000000703) #26 Dynap (ENSMAUG00000000151) Rab27b (ENSMAUG00000012806) #29 Ccdc68 (ENSMAUG00000016227) #30 Tcf4 (ENSMAUG00000015171) #31 Mc2r (ENSMAUG00000016719) Mc5r (ENSMAUG00000013259) Rnmt (ENSMAUG00000000955) Fam210a (ENSMAUG00000009871) Ldlrad4 (ENSMAUG00000005521) ENSMAUG00000017918 Murinae ANCESTRAL SPECIES 17 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00940000168426 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 Mus ANCESTRAL SPECIES 19 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00940000168426 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00860000135602 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A Mus_A ANCESTRAL SPECIES 19 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00940000168426 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00860000135602 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A Mus_B ANCESTRAL SPECIES 19 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00940000168426 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00860000135602 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A Mouse MODERN SPECIES 9 BC031181 (ENSMUSG00000036299) Rpl17 (ENSMUSG00000062328) Lipg (ENSMUSG00000053846) Acaa2 (ENSMUSG00000036880) Myo5b (ENSMUSG00000025885) Cfap53 (ENSMUSG00000035394) Mbd1 (ENSMUSG00000024561) ##23 Cxxc1 (ENSMUSG00000024560) Ska1 (ENSMUSG00000036223) Mapk4 (ENSMUSG00000024558) Mro (ENSMUSG00000064036) #16 Me2 (ENSMUSG00000024556) #17 Elac1 (ENSMUSG00000036941) #18 Smad4 (ENSMUSG00000024515) #19 Mex3c (ENSMUSG00000037253) #20 Dcc (ENSMUSG00000060534) #22 Mbd2 (ENSMUSG00000024513) #23 Poli (ENSMUSG00000038425) #24 Stard6 (ENSMUSG00000079608) #25 4930503L19Rik (ENSMUSG00000044906) #26 Dynap (ENSMUSG00000024512) Rab27b (ENSMUSG00000024511) #29 Ccdc68 (ENSMUSG00000038903) #30 Tcf4 (ENSMUSG00000053477) #31 Mc2r (ENSMUSG00000045569) Mc5r (ENSMUSG00000007480) Rnmt (ENSMUSG00000009535) Fam210a (ENSMUSG00000038121) Ldlrad4 (ENSMUSG00000024544) Cep192 (ENSMUSG00000024542) Seh1l (ENSMUSG00000079614) Mus_C ANCESTRAL SPECIES 16 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00860000135602 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00860000135959 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 spretus MODERN SPECIES 9 MGP_SPRETEiJ_G0023317 Lipg (MGP_SPRETEiJ_G0023316) Acaa2 (MGP_SPRETEiJ_G0023315) Myo5b (MGP_SPRETEiJ_G0023314) Cfap53 (MGP_SPRETEiJ_G0023313) Cxxc1 (MGP_SPRETEiJ_G0023312) Ska1 (MGP_SPRETEiJ_G0023311) MGP_SPRETEiJ_G0023310 Mapk4 (MGP_SPRETEiJ_G0023309) Mro (MGP_SPRETEiJ_G0023308) #16 Me2 (MGP_SPRETEiJ_G0023307) #17 Elac1 (MGP_SPRETEiJ_G0023306) #18 Smad4 (MGP_SPRETEiJ_G0023305) #19 Mbd1 (MGP_SPRETEiJ_G0023304) ##23 Mex3c (MGP_SPRETEiJ_G0023303) #20 Dcc (MGP_SPRETEiJ_G0023302) #22 Mbd2 (MGP_SPRETEiJ_G0023301) #23 Poli (MGP_SPRETEiJ_G0023300) #24 Stard6 (MGP_SPRETEiJ_G0023299) #25 4930503L19Rik (MGP_SPRETEiJ_G0023298) #26 Dynap (MGP_SPRETEiJ_G0023297) Rab27b (MGP_SPRETEiJ_G0023296) #29 Ccdc68 (MGP_SPRETEiJ_G0023295) #30 Tcf4 (MGP_SPRETEiJ_G0023294) #31 MGP_SPRETEiJ_G0023293 Mc2r (MGP_SPRETEiJ_G0023292) Mc5r (MGP_SPRETEiJ_G0023291) Rnmt (MGP_SPRETEiJ_G0023290) Fam210a (MGP_SPRETEiJ_G0023289) Ldlrad4 (MGP_SPRETEiJ_G0023288) Cep192 (MGP_SPRETEiJ_G0023287) Steppe mouse MODERN SPECIES 2981 ENSMSIG00000011963 #22 ENSMSIG00000011941 #23 Poli (ENSMSIG00000011896) #24 Stard6 (ENSMSIG00000011882) #25 4930503L19Rik (ENSMSIG00000011796) #26 ENSMSIG00000011794 Ryukyu mouse MODERN SPECIES 9 BC031181 (MGP_CAROLIEiJ_G0022405) Rpl17 (MGP_CAROLIEiJ_G0022404) Lipg (MGP_CAROLIEiJ_G0022403) Acaa2 (MGP_CAROLIEiJ_G0022402) Myo5b (MGP_CAROLIEiJ_G0022401) Cfap53 (MGP_CAROLIEiJ_G0022400) Cxxc1 (MGP_CAROLIEiJ_G0022399) Ska1 (MGP_CAROLIEiJ_G0022398) MGP_CAROLIEiJ_G0022397 Mapk4 (MGP_CAROLIEiJ_G0022396) Mro (MGP_CAROLIEiJ_G0022395) #16 Me2 (MGP_CAROLIEiJ_G0022394) #17 Elac1 (MGP_CAROLIEiJ_G0022393) #18 Smad4 (MGP_CAROLIEiJ_G0022392) #19 Mex3c (MGP_CAROLIEiJ_G0022391) #20 Dcc (MGP_CAROLIEiJ_G0022390) #22 Mbd2 (MGP_CAROLIEiJ_G0022389) #23 Poli (MGP_CAROLIEiJ_G0022388) #24 Stard6 (MGP_CAROLIEiJ_G0022387) #25 4930503L19Rik (MGP_CAROLIEiJ_G0022386) #26 Dynap (MGP_CAROLIEiJ_G0022385) Rab27b (MGP_CAROLIEiJ_G0022384) #29 Ccdc68 (MGP_CAROLIEiJ_G0022383) #30 Tcf4 (MGP_CAROLIEiJ_G0022382) #31 MGP_CAROLIEiJ_G0022381 Mc2r (MGP_CAROLIEiJ_G0022380) Mc5r (MGP_CAROLIEiJ_G0022379) Rnmt (MGP_CAROLIEiJ_G0022378) Fam210a (MGP_CAROLIEiJ_G0022377) Ldlrad4 (MGP_CAROLIEiJ_G0022376) Cep192 (MGP_CAROLIEiJ_G0022375) Shrew mouse MODERN SPECIES 6 Rpl17 (MGP_PahariEiJ_G0019133) Lipg (MGP_PahariEiJ_G0019132) Acaa2 (MGP_PahariEiJ_G0019131) Myo5b (MGP_PahariEiJ_G0019130) Cfap53 (MGP_PahariEiJ_G0019129) MGP_PahariEiJ_G0019128 ##23 Cxxc1 (MGP_PahariEiJ_G0019127) Ska1 (MGP_PahariEiJ_G0019126) MGP_PahariEiJ_G0019125 Mapk4 (MGP_PahariEiJ_G0019124) MGP_PahariEiJ_G0019123 #16 Me2 (MGP_PahariEiJ_G0019122) #17 Elac1 (MGP_PahariEiJ_G0019121) #18 Smad4 (MGP_PahariEiJ_G0019120) #19 Mex3c (MGP_PahariEiJ_G0019119) #20 Dcc (MGP_PahariEiJ_G0019118) #22 Mbd2 (MGP_PahariEiJ_G0019117) #23 Poli (MGP_PahariEiJ_G0019116) #24 Stard6 (MGP_PahariEiJ_G0019115) #25 4930503L19Rik (MGP_PahariEiJ_G0019114) #26 Dynap (MGP_PahariEiJ_G0019113) Rab27b (MGP_PahariEiJ_G0019112) #29 Ccdc68 (MGP_PahariEiJ_G0019111) #30 Tcf4 (MGP_PahariEiJ_G0019110) #31 Mc2r (MGP_PahariEiJ_G0019109) Mc5r (MGP_PahariEiJ_G0019108) Rnmt (MGP_PahariEiJ_G0019107) Fam210a (MGP_PahariEiJ_G0019106) Ldlrad4 (MGP_PahariEiJ_G0019105) Cep192 (MGP_PahariEiJ_G0019104) Seh1l (MGP_PahariEiJ_G0019103) Rat MODERN SPECIES 9 Lipg (ENSRNOG00000018694) Acaa2 (ENSRNOG00000013766) Myo5b (ENSRNOG00000014104) Mbd1 (ENSRNOG00000024104) ##23 Cfap53 (ENSRNOG00000014585) Cxxc1 (ENSRNOG00000014614) Ska1 (ENSRNOG00000015275) Mapk4 (ENSRNOG00000015401) Mro (ENSRNOG00000024426) #16 LOC680512 (ENSRNOG00000033808) Me2 (ENSRNOG00000015582) #17 Elac1 (ENSRNOG00000000113) #18 Smad4 (ENSRNOG00000051965) #19 Mex3c (ENSRNOG00000015777) #20 AABR07032457.1 (ENSRNOG00000015806) Dcc (ENSRNOG00000033099) #22 ENSRNOG00000063041 AABR07032453.1 (ENSRNOG00000038592) Mbd2 (ENSRNOG00000011853) #23 Poli (ENSRNOG00000012111) #24 Stard6 (ENSRNOG00000026324) #25 LOC361346 (ENSRNOG00000028677) #26 Dynap (ENSRNOG00000063474) #27 Dynapl1 (ENSRNOG00000028712) Rab27b (ENSRNOG00000012176) #29 Ccdc68 (ENSRNOG00000021381) #30 Tcf4 (ENSRNOG00000012405) #31 Mc2r (ENSRNOG00000016681) Mc5r (ENSRNOG00000016685) Rnmt (ENSRNOG00000016698) Fam210a (ENSRNOG00000068859) Upper Galilee mountains blind mole rat MODERN SPECIES 1812 Dcc (ENSNGAG00000014870) #22 Lesser Egyptian jerboa MODERN SPECIES 143 ENSJJAG00000010768 #17 Elac1 (ENSJJAG00000010672) #18 Smad4 (ENSJJAG00000008893) #19 Mex3c (ENSJJAG00000005241) #20 ENSJJAG00000001355 ENSJJAG00000000847 ENSJJAG00000013702 Dcc (ENSJJAG00000005791) #22 ENSJJAG00000022704 Vmn2r118 (ENSJJAG00000007013) ENSJJAG00000022934 ENSJJAG00000022536 ENSJJAG00000010074 ENSJJAG00000009767 ENSJJAG00000009435 Acp5 (ENSJJAG00000002644) Elof1 (ENSJJAG00000001405) Cnn1 (ENSJJAG00000001001) ENSJJAG00000000325 Zfp653 (ENSJJAG00000000128) Elavl3 (ENSJJAG00000023513) Prkcsh (ENSJJAG00000021556) ENSJJAG00000020511 Kangaroo rat MODERN SPECIES 362 ENSDORG00000026216 Lipg (ENSDORG00000015147) Acaa2 (ENSDORG00000012365) Myo5b (ENSDORG00000013047) ENSDORG00000013915 Mbd1 (ENSDORG00000013917) ##23 Cxxc1 (ENSDORG00000000890) ENSDORG00000013704 ENSDORG00000028529 Mro (ENSDORG00000004230) #16 Me2 (ENSDORG00000010848) #17 ENSDORG00000024602 Elac1 (ENSDORG00000025215) #18 Smad4 (ENSDORG00000009089) #19 Mex3c (ENSDORG00000025473) #20 Dcc (ENSDORG00000001861) #22 Mbd2 (ENSDORG00000029792) #23 Poli (ENSDORG00000015768) #24 ENSDORG00000023494 #25 4930503L19Rik (ENSDORG00000015771) #26 Rab27b (ENSDORG00000027027) #29 Ccdc68 (ENSDORG00000012696) #30 Tcf4 (ENSDORG00000012697) #31 Txnl1 (ENSDORG00000010462) Wdr7 (ENSDORG00000010463) St8sia3 (ENSDORG00000027411) Onecut2 (ENSDORG00000008672) Fech (ENSDORG00000002794) Nars (ENSDORG00000011542) Atp8b1 (ENSDORG00000011543) Nedd4l (ENSDORG00000016653) Rodentia_A ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Sciuridae ANCESTRAL SPECIES 31 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Marmotini ANCESTRAL SPECIES 31 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788.c #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Marmotini_b ANCESTRAL SPECIES 80 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788.c #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E.z.b Squirrel MODERN SPECIES 97 C18orf32 (ENSSTOG00000024071) ENSSTOG00000005193 LIPG (ENSSTOG00000016012) ACAA2 (ENSSTOG00000020792) MYO5B (ENSSTOG00000019663) CFAP53 (ENSSTOG00000007769) MBD1 (ENSSTOG00000007780) ##23 CXXC1 (ENSSTOG00000029092) SKA1 (ENSSTOG00000003367) MAPK4 (ENSSTOG00000022822) MRO (ENSSTOG00000009940) #16 ME2 (ENSSTOG00000027218) #17 ELAC1 (ENSSTOG00000010591) #18 SMAD4 (ENSSTOG00000028580) #19 MEX3C (ENSSTOG00000022325) #20 DCC (ENSSTOG00000003557) #22 MBD2 (ENSSTOG00000011253) #23 POLI (ENSSTOG00000004392) #24 STARD6 (ENSSTOG00000004409) #25 C18orf54 (ENSSTOG00000010907) #26 ENSSTOG00000032190 RAB27B (ENSSTOG00000003409) #29 CCDC68 (ENSSTOG00000003417) #30 TCF4 (ENSSTOG00000005134) #31 TXNL1 (ENSSTOG00000000075) WDR7 (ENSSTOG00000012129) ST8SIA3 (ENSSTOG00000012260) ONECUT2 (ENSSTOG00000020775) FECH (ENSSTOG00000002138) NARS1 (ENSSTOG00000002118) ATP8B1 (ENSSTOG00000003397) Alpin marmot MODERN SPECIES 10 C18orf32 (ENSMMMG00000006157) ENSMMMG00000006135 LIPG (ENSMMMG00000006111) ACAA2 (ENSMMMG00000006091) MYO5B (ENSMMMG00000005915) CFAP53 (ENSMMMG00000005890) MBD1 (ENSMMMG00000005802) ##23 CXXC1 (ENSMMMG00000005766) SKA1 (ENSMMMG00000005747) MAPK4 (ENSMMMG00000005718) MRO (ENSMMMG00000005705) #16 ME2 (ENSMMMG00000005680) #17 ELAC1 (ENSMMMG00000005660) #18 SMAD4 (ENSMMMG00000005628) #19 MEX3C (ENSMMMG00000005613) #20 DCC (ENSMMMG00000005526) #22 ENSMMMG00000005475 MBD2 (ENSMMMG00000005285) #23 POLI (ENSMMMG00000005242) #24 STARD6 (ENSMMMG00000005217) #25 C18orf54 (ENSMMMG00000005170) #26 ENSMMMG00000005165 RAB27B (ENSMMMG00000005138) #29 CCDC68 (ENSMMMG00000005084) #30 TCF4 (ENSMMMG00000004681) #31 ENSMMMG00000004624 TXNL1 (ENSMMMG00000004568) WDR7 (ENSMMMG00000004539) ST8SIA3 (ENSMMMG00000004494) ONECUT2 (ENSMMMG00000004476) FECH (ENSMMMG00000004463) Eurasian red squirrel MODERN SPECIES 4 ENSSVLG00005020326 ENSSVLG00005020364 LIPG (ENSSVLG00005020493) ACAA2 (ENSSVLG00005020577) MYO5B (ENSSVLG00005020740) CFAP53 (ENSSVLG00005021141) ENSSVLG00005021347 ##23 CXXC1 (ENSSVLG00005021998) SKA1 (ENSSVLG00005022508) MAPK4 (ENSSVLG00005022625) MRO (ENSSVLG00005022669) #16 ENSSVLG00005022892 #17 ELAC1 (ENSSVLG00005023532) #18 SMAD4 (ENSSVLG00005023577) #19 ENSSVLG00005023623 #20 DCC (ENSSVLG00005023748) #22 ENSSVLG00005024226 MBD2 (ENSSVLG00005024263) #23 POLI (ENSSVLG00005024347) #24 STARD6 (ENSSVLG00005024449) #25 ENSSVLG00005024483 #26 ENSSVLG00005024579 RAB27B (ENSSVLG00005024625) #29 CCDC68 (ENSSVLG00005024659) #30 TCF4 (ENSSVLG00005024848) #31 ENSSVLG00005024898 TXNL1 (ENSSVLG00005024925) WDR7 (ENSSVLG00005025038) ST8SIA3 (ENSSVLG00005025139) ENSSVLG00005025154 ONECUT2 (ENSSVLG00005025166) Hystricomorpha ANCESTRAL SPECIES 32 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Hystricomorpha_a ANCESTRAL SPECIES 26 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Hystricomorpha_b ANCESTRAL SPECIES 21 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Long-tailed chinchilla MODERN SPECIES 109 ENSCLAG00000008597 ACAA2 (ENSCLAG00000008998) MYO5B (ENSCLAG00000013994) ENSCLAG00000008426 MBD1 (ENSCLAG00000007457) ##23 CXXC1 (ENSCLAG00000010473) SKA1 (ENSCLAG00000009485) MAPK4 (ENSCLAG00000007282) ENSCLAG00000007082 MRO (ENSCLAG00000007658) #16 ENSCLAG00000007635 #17 ELAC1 (ENSCLAG00000008334) #18 SMAD4 (ENSCLAG00000009301) #19 MEX3C (ENSCLAG00000006969) #20 ENSCLAG00000007427 DCC (ENSCLAG00000008360) #22 ENSCLAG00000017775 MBD2 (ENSCLAG00000010471) #23 POLI (ENSCLAG00000015942) #24 STARD6 (ENSCLAG00000015966) #25 C18orf54 (ENSCLAG00000016460) #26 ENSCLAG00000007044 RAB27B (ENSCLAG00000007524) #29 CCDC68 (ENSCLAG00000008020) #30 TCF4 (ENSCLAG00000008071) #31 TXNL1 (ENSCLAG00000009681) WDR7 (ENSCLAG00000014269) ST8SIA3 (ENSCLAG00000013101) ONECUT2 (ENSCLAG00000011237) FECH (ENSCLAG00000012523) NARS1 (ENSCLAG00000009270) Degu MODERN SPECIES 44 LIPG (ENSODEG00000018437) ENSODEG00000018376 MYO5B (ENSODEG00000018483) ENSODEG00000018463 MBD1 (ENSODEG00000018451) ##23 CXXC1 (ENSODEG00000018469) ENSODEG00000018389 ENSODEG00000018396 ENSODEG00000018450 MRO (ENSODEG00000018415) #16 ME2 (ENSODEG00000018322) #17 ELAC1 (ENSODEG00000018368) #18 SMAD4 (ENSODEG00000018472) #19 MEX3C (ENSODEG00000018398) #20 ENSODEG00000018425 DCC (ENSODEG00000018488) #22 ENSODEG00000018471 ENSODEG00000018470 MBD2 (ENSODEG00000018422) #23 ENSODEG00000018399 STARD6 (ENSODEG00000018474) #25 C18orf54 (ENSODEG00000018408) #26 ENSODEG00000018409 RAB27B (ENSODEG00000018439) #29 CCDC68 (ENSODEG00000018403) #30 TCF4 (ENSODEG00000018490) #31 TXNL1 (ENSODEG00000018479) WDR7 (ENSODEG00000018485) ST8SIA3 (ENSODEG00000018358) ONECUT2 (ENSODEG00000018371) FECH (ENSODEG00000018475) Guinea pig MODERN SPECIES 14 C18orf32 (ENSCPOG00000034745) ENSCPOG00000019337 LIPG (ENSCPOG00000008890) ACAA2 (ENSCPOG00000004734) MYO5B (ENSCPOG00000014213) CFAP53 (ENSCPOG00000001668) MBD1 (ENSCPOG00000001671) ##23 CXXC1 (ENSCPOG00000020250) SKA1 (ENSCPOG00000013281) MAPK4 (ENSCPOG00000010565) MRO (ENSCPOG00000005618) #16 ME2 (ENSCPOG00000012583) #17 ELAC1 (ENSCPOG00000012588) #18 SMAD4 (ENSCPOG00000006470) #19 MEX3C (ENSCPOG00000009646) #20 DCC (ENSCPOG00000002018) #22 MBD2 (ENSCPOG00000006832) #23 POLI (ENSCPOG00000037626) #24 STARD6 (ENSCPOG00000040582) #25 RAB27B (ENSCPOG00000034520) #29 CCDC68 (ENSCPOG00000003569) #30 TCF4 (ENSCPOG00000005267) #31 ENSCPOG00000008145 TXNL1 (ENSCPOG00000032075) WDR7 (ENSCPOG00000008220) ST8SIA3 (ENSCPOG00000021002) ONECUT2 (ENSCPOG00000000055) FECH (ENSCPOG00000013224) ENSCPOG00000040580 ENSCPOG00000013227 ATP8B1 (ENSCPOG00000006375) Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000000916 ENSHGLG00000032259 ENSHGLG00000004481 ENSHGLG00000006732 ENSHGLG00000007419 MBD1 (ENSHGLG00000008740) ##23 SKA1 (ENSHGLG00000012193) ENSHGLG00000042086 ENSHGLG00000015531 MRO (ENSHGLG00000014593) #16 ENSHGLG00000008828 #17 ELAC1 (ENSHGLG00000033818) #18 SMAD4 (ENSHGLG00000005758) #19 ENSHGLG00000045506 MEX3C (ENSHGLG00000004567) #20 DCC (ENSHGLG00000005265) #22 ENSHGLG00000033712 MBD2 (ENSHGLG00000039782) #23 ENSHGLG00000008868 #24 ENSHGLG00000004780 ENSHGLG00000045151 #25 ENSHGLG00000048044 #26 ENSHGLG00000037393 ENSHGLG00000008021 ENSHGLG00000038847 ENSHGLG00000006292 LIPG (ENSHGLG00000010224) ENSHGLG00000047452 ENSHGLG00000036153 ENSHGLG00000009081 ENSHGLG00000015030 Lagomorpha ANCESTRAL SPECIES 29 ENSGT00390000018741 ENSGT00950000183010.a.b.a.a.a.a.b.k ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000265446 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Rabbit MODERN SPECIES 20 LIPG (ENSOCUG00000013471) ACAA2 (ENSOCUG00000016540) MYO5B (ENSOCUG00000009547) ENSOCUG00000037569 ENSOCUG00000017123 MBD1 (ENSOCUG00000006554) ##23 CXXC1 (ENSOCUG00000025756) SKA1 (ENSOCUG00000007927) MAPK4 (ENSOCUG00000013016) MRO (ENSOCUG00000007663) #16 ME2 (ENSOCUG00000012433) #17 ELAC1 (ENSOCUG00000009509) #18 SMAD4 (ENSOCUG00000003929) #19 MEX3C (ENSOCUG00000012549) #20 ENSOCUG00000038228 DCC (ENSOCUG00000000384) #22 ENSOCUG00000033920 MBD2 (ENSOCUG00000021080) #23 ENSOCUG00000003746 #24 STARD6 (ENSOCUG00000029013) #25 C18orf54 (ENSOCUG00000015283) #26 ENSOCUG00000033740 #27 ENSOCUG00000030546 RAB27B (ENSOCUG00000022858) #29 CCDC68 (ENSOCUG00000014516) #30 TCF4 (ENSOCUG00000002669) #31 ENSOCUG00000037878 TXNL1 (ENSOCUG00000002505) WDR7 (ENSOCUG00000002512) ST8SIA3 (ENSOCUG00000011662) ONECUT2 (ENSOCUG00000021525) Pika MODERN SPECIES 4184 DCC (ENSOPRG00000016770) #22 Tree shrew MODERN SPECIES 4716 DCC (ENSTBEG00000016912) #22 Laurasiatheria ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Eulipotyphla ANCESTRAL SPECIES ENSGT00940000158867 #22 Hedgehog MODERN SPECIES 7874 DCC (ENSEEUG00000012927) #22 Common shrew MODERN SPECIES 6180 DCC (ENSSARG00000010153) #22 Laurasiatheria_a ANCESTRAL SPECIES 13 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Artiodactyla ANCESTRAL SPECIES 17 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Suina ANCESTRAL SPECIES 12 ENSGT00390000018741 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Chacoan peccary MODERN SPECIES 122 ENSCWAG00000018521 MYO5B (ENSCWAG00000018457) CFAP53 (ENSCWAG00000018402) MBD1 (ENSCWAG00000018326) ##23 CXXC1 (ENSCWAG00000018259) SKA1 (ENSCWAG00000018123) ENSCWAG00000018092 MRO (ENSCWAG00000017997) #16 ME2 (ENSCWAG00000017770) #17 ELAC1 (ENSCWAG00000017700) #18 SMAD4 (ENSCWAG00000017649) #19 MEX3C (ENSCWAG00000017619) #20 ENSCWAG00000017584 DCC (ENSCWAG00000017136) #22 MBD2 (ENSCWAG00000017006) #23 POLI (ENSCWAG00000016867) #24 STARD6 (ENSCWAG00000016804) #25 C18orf54 (ENSCWAG00000016630) #26 ENSCWAG00000016595 DYNAP (ENSCWAG00000016556) #27 Pig MODERN SPECIES ENSSSCG00000049462 ENSSSCG00000045942 ENSSSCG00000061513 ENSSSCG00000041158 CFAP53 (ENSSSCG00000055973) MBD1 (ENSSSCG00000004516) ##23 CXXC1 (ENSSSCG00000004517) SKA1 (ENSSSCG00000004518) ENSSSCG00000004520 MRO (ENSSSCG00000004521) #16 ME2 (ENSSSCG00000004522) #17 ELAC1 (ENSSSCG00000024479) #18 SMAD4 (ENSSSCG00000004524) #19 MEX3C (ENSSSCG00000034427) #20 ENSSSCG00000047971 DCC (ENSSSCG00000040836) #22 ENSSSCG00000043320 MBD2 (ENSSSCG00000004528) #23 POLI (ENSSSCG00000004529) #24 STARD6 (ENSSSCG00000004530) #25 C18orf54 (ENSSSCG00000004531) #26 ENSSSCG00000038606 DYNAP (ENSSSCG00000042812) #27 RAB27B (ENSSSCG00000035243) #29 CCDC68 (ENSSSCG00000004534) #30 TCF4 (ENSSSCG00000004535) #31 TXNL1 (ENSSSCG00000004537) WDR7 (ENSSSCG00000004538) ST8SIA3 (ENSSSCG00000038971) ONECUT2 (ENSSSCG00000004540) FECH (ENSSSCG00000004541) Artiodactyla_a ANCESTRAL SPECIES 17 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Artiodactyla_b ANCESTRAL SPECIES 10 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Cetacea ANCESTRAL SPECIES 11 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190376.b ENSGT00940000166688.b ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Odontoceti ANCESTRAL SPECIES 10 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190376.b ENSGT00940000166688.b ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Odontoceti_a ANCESTRAL SPECIES 9 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.i ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190376.b ENSGT00940000166688.b ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Odontoceti_b ANCESTRAL SPECIES 10 ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.i ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190376.b ENSGT00940000166688.b ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Monodontidae ANCESTRAL SPECIES 8 ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654.i ENSGT00990000210587 ENSGT00390000011654.j ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190376.b ENSGT00940000166688.b ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Narwhal MODERN SPECIES 295 DYM (ENSMMNG00015001014) ENSMMNG00015000947 ENSMMNG00015000862 LIPG (ENSMMNG00015000826) ENSMMNG00015000802 ACAA2 (ENSMMNG00015000776) ENSMMNG00015000736 ENSMMNG00015000706 MRO (ENSMMNG00015000680) #16 ME2 (ENSMMNG00015000602) #17 ELAC1 (ENSMMNG00015000560) #18 SMAD4 (ENSMMNG00015000527) #19 MEX3C (ENSMMNG00015000471) #20 ENSMMNG00015000436 ENSMMNG00015000421 DCC (ENSMMNG00015000224) #22 ENSMMNG00015000016 MBD2 (ENSMMNG00015007380) #23 POLI (ENSMMNG00015007331) #24 STARD6 (ENSMMNG00015007313) #25 C18orf54 (ENSMMNG00015007290) #26 RAB27B (ENSMMNG00015007238) #29 CCDC68 (ENSMMNG00015007197) #30 TCF4 (ENSMMNG00015006368) #31 ENSMMNG00015006103 TXNL1 (ENSMMNG00015006084) WDR7 (ENSMMNG00015005999) ST8SIA3 (ENSMMNG00015005958) ONECUT2 (ENSMMNG00015005900) FECH (ENSMMNG00015005882) NARS1 (ENSMMNG00015005856) Beluga whale MODERN SPECIES 25 ENSDLEG00000004561 ACAA2 (ENSDLEG00000004552) MYO5B (ENSDLEG00000004517) CFAP53 (ENSDLEG00000004488) MBD1 (ENSDLEG00000004462) ##23 CXXC1 (ENSDLEG00000004445) ENSDLEG00000004437 ENSDLEG00000004434 MAPK4 (ENSDLEG00000004428) MRO (ENSDLEG00000004425) #16 ME2 (ENSDLEG00000004409) #17 ELAC1 (ENSDLEG00000004401) #18 SMAD4 (ENSDLEG00000004395) #19 MEX3C (ENSDLEG00000004392) #20 ENSDLEG00000004386 DCC (ENSDLEG00000004245) #22 MBD2 (ENSDLEG00000004210) #23 POLI (ENSDLEG00000004201) #24 STARD6 (ENSDLEG00000004192) #25 CUNH18orf54 (ENSDLEG00000004187) #26 DYNAP (ENSDLEG00000004184) #27 RAB27B (ENSDLEG00000004179) #29 CCDC68 (ENSDLEG00000004169) #30 TCF4 (ENSDLEG00000004150) #31 ENSDLEG00000004143 TXNL1 (ENSDLEG00000004132) WDR7 (ENSDLEG00000004055) ST8SIA3 (ENSDLEG00000004038) ONECUT2 (ENSDLEG00000004035) FECH (ENSDLEG00000004026) NARS (ENSDLEG00000004016) Vaquita MODERN SPECIES 5 ENSPSNG00000009066 MYO5B (ENSPSNG00000008965) CFAP53 (ENSPSNG00000008868) MBD1 (ENSPSNG00000008606) ##23 CXXC1 (ENSPSNG00000008435) SKA1 (ENSPSNG00000008361) ENSPSNG00000008320 MRO (ENSPSNG00000008257) #16 ME2 (ENSPSNG00000008129) #17 ELAC1 (ENSPSNG00000008066) #18 SMAD4 (ENSPSNG00000008007) #19 MEX3C (ENSPSNG00000007985) #20 ENSPSNG00000007972 ENSPSNG00000007942 ENSPSNG00000007925 DCC (ENSPSNG00000007423) #22 MBD2 (ENSPSNG00000007268) #23 POLI (ENSPSNG00000007184) #24 STARD6 (ENSPSNG00000007129) #25 C18orf54 (ENSPSNG00000007061) #26 RAB27B (ENSPSNG00000006964) #29 CCDC68 (ENSPSNG00000006910) #30 ENSPSNG00000006882 ENSPSNG00000006776 TCF4 (ENSPSNG00000005296) #31 TXNL1 (ENSPSNG00000004744) WDR7 (ENSPSNG00000004704) ST8SIA3 (ENSPSNG00000004660) ONECUT2 (ENSPSNG00000004637) FECH (ENSPSNG00000004601) NARS1 (ENSPSNG00000004542) Dolphin MODERN SPECIES 2449 DCC (ENSTTRG00000015629) #22 Sperm whale MODERN SPECIES 10 ENSPCTG00005010783 CFAP53 (ENSPCTG00005012030) MBD1 (ENSPCTG00005012098) ##23 CXXC1 (ENSPCTG00005012649) SKA1 (ENSPCTG00005012981) ENSPCTG00005013095 MRO (ENSPCTG00005013153) #16 ME2 (ENSPCTG00005013372) #17 ELAC1 (ENSPCTG00005013645) #18 SMAD4 (ENSPCTG00005013716) #19 MEX3C (ENSPCTG00005013828) #20 ENSPCTG00005013881 ENSPCTG00005013928 ENSPCTG00005013989 ENSPCTG00005014007 DCC (ENSPCTG00005014061) #22 MBD2 (ENSPCTG00005015131) #23 POLI (ENSPCTG00005015301) #24 STARD6 (ENSPCTG00005015396) #25 C19H18orf54 (ENSPCTG00005004368) #26 ENSPCTG00005004391 #27 RAB27B (ENSPCTG00005004412) #29 CCDC68 (ENSPCTG00005004429) #30 TCF4 (ENSPCTG00005004622) #31 ENSPCTG00005005635 TXNL1 (ENSPCTG00005005651) WDR7 (ENSPCTG00005005758) ST8SIA3 (ENSPCTG00005005861) ONECUT2 (ENSPCTG00005005889) FECH (ENSPCTG00005005911) NARS1 (ENSPCTG00005005993) Blue whale MODERN SPECIES 5 LIPG (ENSBMSG00010021562) ACAA2 (ENSBMSG00010021576) MYO5B (ENSBMSG00010009537) CFAP53 (ENSBMSG00010009568) MBD1 (ENSBMSG00010009608) ##23 CXXC1 (ENSBMSG00010009732) SKA1 (ENSBMSG00010009775) ENSBMSG00010009796 ENSBMSG00010009805 MRO (ENSBMSG00010009824) #16 ME2 (ENSBMSG00010009846) #17 ELAC1 (ENSBMSG00010009858) #18 SMAD4 (ENSBMSG00010009874) #19 MEX3C (ENSBMSG00010009893) #20 ENSBMSG00010009902 DCC (ENSBMSG00010009938) #22 ENSBMSG00010010006 MBD2 (ENSBMSG00010010022) #23 POLI (ENSBMSG00010010045) #24 STARD6 (ENSBMSG00010010059) #25 C18orf54 (ENSBMSG00010010073) #26 ENSBMSG00010010086 RAB27B (ENSBMSG00010010092) #29 CCDC68 (ENSBMSG00010010114) #30 TCF4 (ENSBMSG00010010256) #31 ENSBMSG00010010977 TXNL1 (ENSBMSG00010010991) WDR7 (ENSBMSG00010011015) ST8SIA3 (ENSBMSG00010011033) FECH (ENSBMSG00010011071) NARS1 (ENSBMSG00010011098) Pecora ANCESTRAL SPECIES 26 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Percora_a ANCESTRAL SPECIES 28 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Bovidae ANCESTRAL SPECIES 28 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Caprinae ANCESTRAL SPECIES 25 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642.b #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Goat MODERN SPECIES 16 ENSCHIG00000011677 LIPG (ENSCHIG00000015994) ENSCHIG00000003894 ACAA2 (ENSCHIG00000024466) MYO5B (ENSCHIG00000016585) CFAP53 (ENSCHIG00000001175) MBD1 (ENSCHIG00000021134) ##23 CXXC1 (ENSCHIG00000014305) SKA1 (ENSCHIG00000014694) MAPK4 (ENSCHIG00000013396) ENSCHIG00000016460 #16 ME2 (ENSCHIG00000001144) #17 ELAC1 (ENSCHIG00000014278) #18 SMAD4 (ENSCHIG00000019181) #19 MEX3C (ENSCHIG00000017962) #20 DCC (ENSCHIG00000025162) #22 ENSCHIG00000019871 MBD2 (ENSCHIG00000011602) #23 POLI (ENSCHIG00000020002) #24 STARD6 (ENSCHIG00000015688) #25 C18orf54 (ENSCHIG00000022200) #26 ENSCHIG00000015134 ENSCHIG00000009672 RAB27B (ENSCHIG00000016115) #29 CCDC68 (ENSCHIG00000011317) #30 TCF4 (ENSCHIG00000019406) #31 ENSCHIG00000012821 TXNL1 (ENSCHIG00000021510) WDR7 (ENSCHIG00000002769) ST8SIA3 (ENSCHIG00000020763) ONECUT2 (ENSCHIG00000012085) Rambouillet Sheep MODERN SPECIES 15 ENSOARG00020011257 C18orf32 (ENSOARG00020011289) RPL17 (ENSOARG00020011339) LIPG (ENSOARG00020011622) ACAA2 (ENSOARG00020011796) MYO5B (ENSOARG00020012171) ENSOARG00020013652 ##23 SKA1 (ENSOARG00020015277) MAPK4 (ENSOARG00020015369) MRO (ENSOARG00020015446) #16 ME2 (ENSOARG00020015563) #17 ELAC1 (ENSOARG00020015975) #18 SMAD4 (ENSOARG00020016034) #19 MEX3C (ENSOARG00020016147) #20 ENSOARG00020016162 DCC (ENSOARG00020016246) #22 ENSOARG00020016832 MBD2 (ENSOARG00020016893) #23 POLI (ENSOARG00020017236) #24 STARD6 (ENSOARG00020017708) #25 ENSOARG00020017825 RAB27B (ENSOARG00020017852) #29 CCDC68 (ENSOARG00020017914) #30 TCF4 (ENSOARG00020018136) #31 ENSOARG00020023628 TXNL1 (ENSOARG00020023636) ENSOARG00020023680 WDR7 (ENSOARG00020023720) ST8SIA3 (ENSOARG00020023917) ONECUT2 (ENSOARG00020023929) FECH (ENSOARG00020023945) Bovinae ANCESTRAL SPECIES 28 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190719 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Bos ANCESTRAL SPECIES 29 ENSGT00390000018741.j ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190719 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Bos_a ANCESTRAL SPECIES 28 ENSGT00390000018741.j ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00970000193421.C.a ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Domestic yak MODERN SPECIES 13 ENSBGRG00000022965 LIPG (ENSBGRG00000023098) ACAA2 (ENSBGRG00000023212) ENSBGRG00000023371 ENSBGRG00000023396 MBD1 (ENSBGRG00000023527) ##23 CXXC1 (ENSBGRG00000023942) SKA1 (ENSBGRG00000024086) MAPK4 (ENSBGRG00000024208) MRO (ENSBGRG00000024247) #16 ME2 (ENSBGRG00000024333) #17 ELAC1 (ENSBGRG00000024517) #18 SMAD4 (ENSBGRG00000024537) #19 MEX3C (ENSBGRG00000024594) #20 ENSBGRG00000024631 DCC (ENSBGRG00000024683) #22 MBD2 (ENSBGRG00000025200) #23 POLI (ENSBGRG00000025249) #24 STARD6 (ENSBGRG00000025257) #25 C18orf54 (ENSBGRG00000025272) #26 ENSBGRG00000025328 ENSBGRG00000025352 #27 ENSBGRG00000025356 ENSBGRG00000025400 RAB27B (ENSBGRG00000025409) #29 CCDC68 (ENSBGRG00000025432) #30 TCF4 (ENSBGRG00000025535) #31 ENSBGRG00000026050 ENSBGRG00000026057 ENSBGRG00000010575 TXNL1 (ENSBGRG00000010589) Wild yak MODERN SPECIES 1003 ENSBMUG00000000556 ENSBMUG00000000528 ENSBMUG00000000509 DCC (ENSBMUG00000000451) #22 Bos_b ANCESTRAL SPECIES 34 ENSGT00390000018741.i.b ENSGT00950000183010.a.b.a.b.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00960000190719 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00970000197079 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Hybrid Bos Indicus MODERN SPECIES 16 ENSBIXG00005007771 LIPG (ENSBIXG00005004622) ACAA2 (ENSBIXG00005026872) MYO5B (ENSBIXG00005026770) ENSBIXG00005026615 ##23 CXXC1 (ENSBIXG00005026115) SKA1 (ENSBIXG00005004443) MAPK4 (ENSBIXG00005025994) MRO (ENSBIXG00005025968) #16 ME2 (ENSBIXG00005025823) #17 ELAC1 (ENSBIXG00005025678) #18 SMAD4 (ENSBIXG00005025648) #19 MEX3C (ENSBIXG00005025578) #20 ENSBIXG00005025566 ENSBIXG00005025532 DCC (ENSBIXG00005004333) #22 MBD2 (ENSBIXG00005004276) #23 ENSBIXG00005025041 ENSBIXG00005025038 POLI (ENSBIXG00005024986) #24 STARD6 (ENSBIXG00005024888) #25 C18orf54 (ENSBIXG00005024871) #26 RAB27B (ENSBIXG00005024664) #29 CCDC68 (ENSBIXG00005024584) #30 TCF4 (ENSBIXG00005024466) #31 ENSBIXG00005023809 TXNL1 (ENSBIXG00005023757) WDR7 (ENSBIXG00005006281) ST8SIA3 (ENSBIXG00005023483) ONECUT2 (ENSBIXG00005023442) FECH (ENSBIXG00005006900) Cow MODERN SPECIES 16 C24H18orf32 (ENSBTAG00000021334) RPL17 (ENSBTAG00000022902) LIPG (ENSBTAG00000048916) ACAA2 (ENSBTAG00000002863) MYO5B (ENSBTAG00000019455) MBD1 (ENSBTAG00000003801) ##23 CXXC1 (ENSBTAG00000021884) SKA1 (ENSBTAG00000018216) MAPK4 (ENSBTAG00000009907) MRO (ENSBTAG00000047635) #16 ME2 (ENSBTAG00000016269) #17 ELAC1 (ENSBTAG00000005683) #18 SMAD4 (ENSBTAG00000006919) #19 MEX3C (ENSBTAG00000014886) #20 ENSBTAG00000049503 DCC (ENSBTAG00000048378) #22 MBD2 (ENSBTAG00000037457) #23 ENSBTAG00000049603 POLI (ENSBTAG00000009129) #24 STARD6 (ENSBTAG00000008168) #25 C24H18orf54 (ENSBTAG00000008169) #26 CUPIN1 (ENSBTAG00000048804) ENSBTAG00000013871 RAB27B (ENSBTAG00000002788) #29 CCDC68 (ENSBTAG00000008158) #30 TCF4 (ENSBTAG00000016462) #31 TXNL1 (ENSBTAG00000015731) WDR7 (ENSBTAG00000004005) ST8SIA3 (ENSBTAG00000007347) ONECUT2 (ENSBTAG00000022819) FECH (ENSBTAG00000006393) American bison MODERN SPECIES 3263 ENSBBBG00000018605 DCC (ENSBBBG00000018654) #22 MBD2 (ENSBBBG00000018660) #23 POLI (ENSBBBG00000004646) #24 STARD6 (ENSBBBG00000018687) #25 C18orf54 (ENSBBBG00000004674) #26 RAB27B (ENSBBBG00000018758) #29 CCDC68 (ENSBBBG00000004722) #30 TCF4 (ENSBBBG00000019287) #31 ENSBBBG00000005021 TXNL1 (ENSBBBG00000019350) WDR7 (ENSBBBG00000008661) ST8SIA3 (ENSBBBG00000019465) ONECUT2 (ENSBBBG00000019474) FECH (ENSBBBG00000005210) NARS1 (ENSBBBG00000019498) ATP8B1 (ENSBBBG00000005293) Siberian musk deer MODERN SPECIES 145 DCC (ENSMMSG00000006766) #22 Yarkand deer MODERN SPECIES 19 MYO5B (ENSCHYG00000026574) ENSCHYG00000026350 ##23 CXXC1 (ENSCHYG00000026245) SKA1 (ENSCHYG00000026215) MAPK4 (ENSCHYG00000026191) MRO (ENSCHYG00000026169) #16 ME2 (ENSCHYG00000026116) #17 ELAC1 (ENSCHYG00000026085) #18 SMAD4 (ENSCHYG00000026027) #19 MEX3C (ENSCHYG00000025999) #20 ENSCHYG00000025987 ENSCHYG00000025984 ENSCHYG00000025969 ENSCHYG00000025960 ENSCHYG00000025951 DCC (ENSCHYG00000025701) #22 MBD2 (ENSCHYG00000025532) #23 POLI (ENSCHYG00000025478) #24 STARD6 (ENSCHYG00000025439) #25 C18orf54 (ENSCHYG00000025339) #26 ENSCHYG00000025310 ENSCHYG00000025287 RAB27B (ENSCHYG00000025256) #29 CCDC68 (ENSCHYG00000025233) #30 TCF4 (ENSCHYG00000024974) #31 ENSCHYG00000024892 TXNL1 (ENSCHYG00000024776) ENSCHYG00000024655 WDR7 (ENSCHYG00000024551) ENSCHYG00000024523 ST8SIA3 (ENSCHYG00000024501) Camelidae ANCESTRAL SPECIES 53 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Arabian camel MODERN SPECIES 23 RPL17 (ENSCDRG00005011453) LIPG (ENSCDRG00005010970) ENSCDRG00005010930 ACAA2 (ENSCDRG00005010799) MYO5B (ENSCDRG00005010461) CFAP53 (ENSCDRG00005010332) MBD1 (ENSCDRG00005010072) ##23 CXXC1 (ENSCDRG00005009892) SKA1 (ENSCDRG00005009696) MAPK4 (ENSCDRG00005009618) MRO (ENSCDRG00005009438) #16 ME2 (ENSCDRG00005009190) #17 ELAC1 (ENSCDRG00005009129) #18 SMAD4 (ENSCDRG00005009019) #19 MEX3C (ENSCDRG00005008924) #20 DCC (ENSCDRG00005021692) #22 MBD2 (ENSCDRG00005021689) #23 POLI (ENSCDRG00005021682) #24 STARD6 (ENSCDRG00005021679) #25 C18orf54 (ENSCDRG00005021676) #26 ENSCDRG00005021674 #27 RAB27B (ENSCDRG00005021672) #29 CCDC68 (ENSCDRG00005021671) #30 TCF4 (ENSCDRG00005020285) #31 TXNL1 (ENSCDRG00005020164) WDR7 (ENSCDRG00005020090) ST8SIA3 (ENSCDRG00005020077) ONECUT2 (ENSCDRG00005020043) FECH (ENSCDRG00005020023) NARS1 (ENSCDRG00005019984) ATP8B1 (ENSCDRG00005019962) Alpaca MODERN SPECIES 2156 MEX3C (ENSVPAG00000003137) #20 DCC (ENSVPAG00000003138) #22 Laurasiatheria_b ANCESTRAL SPECIES 13 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Carnivora ANCESTRAL SPECIES 13 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Caniformia ANCESTRAL SPECIES 9 ENSGT00390000018741 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Caniformia_b ANCESTRAL SPECIES 25 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Ursidae ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301.w.b ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Ursus ANCESTRAL SPECIES 25 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.d ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301.w.b Polar bear MODERN SPECIES 96 C18orf32 (ENSUMAG00000002755) ENSUMAG00000002766 LIPG (ENSUMAG00000002779) ACAA2 (ENSUMAG00000002792) MYO5B (ENSUMAG00000002812) MBD1 (ENSUMAG00000002947) ##23 CXXC1 (ENSUMAG00000003014) SKA1 (ENSUMAG00000003034) MAPK4 (ENSUMAG00000003042) MRO (ENSUMAG00000003055) #16 ME2 (ENSUMAG00000003096) #17 ELAC1 (ENSUMAG00000003132) #18 SMAD4 (ENSUMAG00000003120) #19 MEX3C (ENSUMAG00000003137) #20 ENSUMAG00000003148 DCC (ENSUMAG00000003174) #22 MBD2 (ENSUMAG00000003257) #23 POLI (ENSUMAG00000003446) #24 STARD6 (ENSUMAG00000003451) #25 C18orf54 (ENSUMAG00000003457) #26 ENSUMAG00000003482 RAB27B (ENSUMAG00000003499) #29 CCDC68 (ENSUMAG00000003505) #30 TCF4 (ENSUMAG00000003526) #31 ENSUMAG00000003531 #31 ENSUMAG00000003543 TXNL1 (ENSUMAG00000003547) WDR7 (ENSUMAG00000003707) Giant Panda MODERN SPECIES 5 ENSAMEG00000027976 RPL17 (ENSAMEG00000009498) LIPG (ENSAMEG00000009434) ACAA2 (ENSAMEG00000009411) MYO5B (ENSAMEG00000009253) MBD1 (ENSAMEG00000000238) ##23 CXXC1 (ENSAMEG00000000259) SKA1 (ENSAMEG00000000280) MAPK4 (ENSAMEG00000026715) MRO (ENSAMEG00000002971) #16 ME2 (ENSAMEG00000002933) #17 ELAC1 (ENSAMEG00000002931) #18 SMAD4 (ENSAMEG00000002899) #19 MEX3C (ENSAMEG00000002897) #20 ENSAMEG00000002879 DCC (ENSAMEG00000017215) #22 MBD2 (ENSAMEG00000017208) #23 POLI (ENSAMEG00000017194) #24 STARD6 (ENSAMEG00000017188) #25 C18orf54 (ENSAMEG00000017187) #26 ENSAMEG00000003344 ENSAMEG00000031262 #27 ENSAMEG00000031006 RAB27B (ENSAMEG00000017177) #29 CCDC68 (ENSAMEG00000017171) #30 TCF4 (ENSAMEG00000017162) #31 TXNL1 (ENSAMEG00000014729) WDR7 (ENSAMEG00000014743) ST8SIA3 (ENSAMEG00000014804) ONECUT2 (ENSAMEG00000025402) FECH (ENSAMEG00000014813) Mustelinae ANCESTRAL SPECIES 5 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 American mink MODERN SPECIES 1 RPL17 (ENSNVIG00000001575) LIPG (ENSNVIG00000001676) ACAA2 (ENSNVIG00000001712) MYO5B (ENSNVIG00000001798) CFAP53 (ENSNVIG00000001864) ENSNVIG00000001883 MBD1 (ENSNVIG00000001896) ##23 CXXC1 (ENSNVIG00000002380) SKA1 (ENSNVIG00000002493) MAPK4 (ENSNVIG00000002506) MSTRO (ENSNVIG00000002520) #16 ME2 (ENSNVIG00000002617) #17 RNZ1 (ENSNVIG00000002709) #18 SMAD4 (ENSNVIG00000002745) #19 MEX3C (ENSNVIG00000002828) #20 DCC (ENSNVIG00000002859) #22 MBD2 (ENSNVIG00000002943) #23 POLI (ENSNVIG00000002960) #24 ENSNVIG00000003016 #25 C18orf54 (ENSNVIG00000003027) #26 Ferret MODERN SPECIES 481 DCC (ENSMPUG00000010503) #22 ENSMPUG00000010514 #23 Canidae ANCESTRAL SPECIES 58 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Canis_lupus ANCESTRAL SPECIES ENSGT00390000000950.c.b.n ENSGT00390000001376.cb.b ENSGT00390000008294.e.a.b.e ENSGT00940000155019.a.b ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368.u ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000153112.D.h.b ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT01100000263504.a.b.a.b.a.b.ib ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Dog MODERN SPECIES ENSCAFG00845004554 ENSCAFG00845004539 CCN2 (ENSCAFG00845004492) ENSCAFG00845004478 LDLRAD4 (ENSCAFG00845004440) FAM210A (ENSCAFG00845003487) RNMT (ENSCAFG00845003471) MC5R (ENSCAFG00845003464) MC2R (ENSCAFG00845003453) MRO (ENSCAFG00845003352) #16 ME2 (ENSCAFG00845003293) #17 SMAD4 (ENSCAFG00845003249) #18 SMAD4 (ENSCAFG00845003229) #19 MEX3C (ENSCAFG00845003206) #20 ENSCAFG00845003189 DCC (ENSCAFG00845003053) #22 ENSCAFG00845002966 MBD2 (ENSCAFG00845002942) #23 POLI (ENSCAFG00845002887) #24 STARD6 (ENSCAFG00845002868) #25 CUPIN1 (ENSCAFG00845002731) #26 ENSCAFG00845002605 RAB27B (ENSCAFG00845002581) #29 CCDC68 (ENSCAFG00845002566) #30 TCF4 (ENSCAFG00845002403) #31 TXNL1 (ENSCAFG00845002269) ENSCAFG00845002237 WDR7 (ENSCAFG00845002062) ST8SIA3 (ENSCAFG00845001921) ONECUT2 (ENSCAFG00845001888) FECH (ENSCAFG00845001850) Dingo MODERN SPECIES 125 MOXD1 (ENSCAFG00020021762) ENSCAFG00020021755 ENSCAFG00020021753 CCN2 (ENSCAFG00020021747) LDLRAD4 (ENSCAFG00020021740) FAM210A (ENSCAFG00020021732) ENSCAFG00020021706 MC5R (ENSCAFG00020021703) MC2R (ENSCAFG00020021702) MRO (ENSCAFG00020021690) #16 ME2 (ENSCAFG00020021686) #17 ELAC1 (ENSCAFG00020021678) #18 SMAD4 (ENSCAFG00020021674) #19 MEX3C (ENSCAFG00020021673) #20 ENSCAFG00020021658 DCC (ENSCAFG00020021641) #22 MBD2 (ENSCAFG00020021622) #23 POLI (ENSCAFG00020021618) #24 ENSCAFG00020021615 STARD6 (ENSCAFG00020021613) #25 C18orf54 (ENSCAFG00020021611) #26 ENSCAFG00020021603 ENSCAFG00020021601 RAB27B (ENSCAFG00020021594) #29 CCDC68 (ENSCAFG00020021589) #30 ENSCAFG00020021285 #31 ENSCAFG00020021197 #31 TXNL1 (ENSCAFG00020021181) ENSCAFG00020021173 WDR7 (ENSCAFG00020021129) ST8SIA3 (ENSCAFG00020021095) Red fox MODERN SPECIES 25 ENSVVUG00000014500 LDLRAD4 (ENSVVUG00000014523) FAM210A (ENSVVUG00000014540) RNMT (ENSVVUG00000014550) MC5R (ENSVVUG00000014564) MC2R (ENSVVUG00000014566) MRO (ENSVVUG00000014571) #16 ME2 (ENSVVUG00000014587) #17 ELAC1 (ENSVVUG00000014595) #18 SMAD4 (ENSVVUG00000014609) #19 MEX3C (ENSVVUG00000014636) #20 ENSVVUG00000014654 DCC (ENSVVUG00000014667) #22 ENSVVUG00000014674 MBD2 (ENSVVUG00000014700) #23 POLI (ENSVVUG00000014845) #24 STARD6 (ENSVVUG00000014848) #25 CUNH18orf54 (ENSVVUG00000014854) #26 CUNH18orf54 (ENSVVUG00000014859) ENSVVUG00000014866 ENSVVUG00000014874 RAB27B (ENSVVUG00000014878) #29 CCDC68 (ENSVVUG00000014885) #30 TCF4 (ENSVVUG00000014890) #31 TXNL1 (ENSVVUG00000014906) WDR7 (ENSVVUG00000014912) ENSVVUG00000014923 ST8SIA3 (ENSVVUG00000014931) Felidae ANCESTRAL SPECIES 24 ENSGT00950000183010.a.a.a.b.a.a.b.a.a ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT01090000260040.a.a.a ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Panthera ANCESTRAL SPECIES 24 ENSGT00950000183010.a.a.a.b.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT01090000260040.a.a.a ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Tiger MODERN SPECIES 143 ENSPTIG00000007691 LIPG (ENSPTIG00000000449) ACAA2 (ENSPTIG00000021827) MYO5B (ENSPTIG00000019987) CFAP53 (ENSPTIG00000018895) MBD1 (ENSPTIG00000021231) ##23 CXXC1 (ENSPTIG00000017258) SKA1 (ENSPTIG00000015731) ENSPTIG00000015504 MRO (ENSPTIG00000013632) #16 ME2 (ENSPTIG00000007762) #17 ELAC1 (ENSPTIG00000006619) #18 SMAD4 (ENSPTIG00000005616) #19 MEX3C (ENSPTIG00000004865) #20 ENSPTIG00000021315 DCC (ENSPTIG00000013104) #22 MBD2 (ENSPTIG00000011491) #23 POLI (ENSPTIG00000009520) #24 STARD6 (ENSPTIG00000008640) #25 C18orf54 (ENSPTIG00000007461) #26 RAB27B (ENSPTIG00000006492) #29 CCDC68 (ENSPTIG00000004987) #30 TCF4 (ENSPTIG00000019887) #31 ENSPTIG00000001536 TXNL1 (ENSPTIG00000017663) WDR7 (ENSPTIG00000010990) ST8SIA3 (ENSPTIG00000010085) FECH (ENSPTIG00000007430) NARS1 (ENSPTIG00000006800) ATP8B1 (ENSPTIG00000021846) NEDD4L (ENSPTIG00000007076) Panthera_a ANCESTRAL SPECIES 26 ENSGT00390000018741.m ENSGT00950000183010.a.a.a.b.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E leopard MODERN SPECIES 43 LIPG (ENSPPRG00000009382) ACAA2 (ENSPPRG00000009885) MYO5B (ENSPPRG00000012444) CFAP53 (ENSPPRG00000012971) MBD1 (ENSPPRG00000021387) ##23 CXXC1 (ENSPPRG00000001170) SKA1 (ENSPPRG00000002324) MAPK4 (ENSPPRG00000003118) MRO (ENSPPRG00000004466) #16 ME2 (ENSPPRG00000008913) #17 ELAC1 (ENSPPRG00000009439) #18 SMAD4 (ENSPPRG00000010397) #19 MEX3C (ENSPPRG00000012151) #20 ENSPPRG00000013111 ENSPPRG00000015809 DCC (ENSPPRG00000000462) #22 MBD2 (ENSPPRG00000001698) #23 POLI (ENSPPRG00000003673) #24 STARD6 (ENSPPRG00000004011) #25 C18orf54 (ENSPPRG00000004732) #26 RAB27B (ENSPPRG00000004858) #29 CCDC68 (ENSPPRG00000005242) #30 TCF4 (ENSPPRG00000006150) #31 ENSPPRG00000017776 TXNL1 (ENSPPRG00000007810) WDR7 (ENSPPRG00000011801) ST8SIA3 (ENSPPRG00000012927) ONECUT2 (ENSPPRG00000013061) FECH (ENSPPRG00000014934) NARS1 (ENSPPRG00000015312) ATP8B1 (ENSPPRG00000019108) lion MODERN SPECIES 12 LIPG (ENSPLOG00000014024) ACAA2 (ENSPLOG00000013846) MYO5B (ENSPLOG00000013501) CFAP53 (ENSPLOG00000013386) MBD1 (ENSPLOG00000013232) ##23 CXXC1 (ENSPLOG00000013121) SKA1 (ENSPLOG00000013016) ENSPLOG00000012947 MRO (ENSPLOG00000012819) #16 ME2 (ENSPLOG00000012643) #17 ELAC1 (ENSPLOG00000012525) #18 SMAD4 (ENSPLOG00000012428) #19 MEX3C (ENSPLOG00000012379) #20 ENSPLOG00000012345 ENSPLOG00000012308 DCC (ENSPLOG00000011680) #22 MBD2 (ENSPLOG00000011506) #23 POLI (ENSPLOG00000011432) #24 STARD6 (ENSPLOG00000011360) #25 C18orf54 (ENSPLOG00000011291) #26 DYNAP (ENSPLOG00000011216) #27 RAB27B (ENSPLOG00000011162) #29 CCDC68 (ENSPLOG00000011056) #30 TCF4 (ENSPLOG00000010490) #31 TXNL1 (ENSPLOG00000010244) WDR7 (ENSPLOG00000010168) ST8SIA3 (ENSPLOG00000010116) ONECUT2 (ENSPLOG00000010100) NARS1 (ENSPLOG00000009844) ATP8B1 (ENSPLOG00000009656) NEDD4L (ENSPLOG00000009056) Cat MODERN SPECIES 243 DYM (ENSFCAG00000012954) ENSFCAG00000022684 RPL17 (ENSFCAG00000011342) LIPG (ENSFCAG00000012354) MYO5B (ENSFCAG00000009880) MBD1 (ENSFCAG00000015730) ##23 CXXC1 (ENSFCAG00000006135) SKA1 (ENSFCAG00000023341) MAPK4 (ENSFCAG00000012154) MRO (ENSFCAG00000030720) #16 ME2 (ENSFCAG00000005659) #17 ELAC1 (ENSFCAG00000039876) #18 SMAD4 (ENSFCAG00000005257) #19 MEX3C (ENSFCAG00000027546) #20 ENSFCAG00000022420 DCC (ENSFCAG00000012953) #22 MBD2 (ENSFCAG00000022047) #23 POLI (ENSFCAG00000039381) #24 STARD6 (ENSFCAG00000028138) #25 CD3H18orf54 (ENSFCAG00000009985) #26 ENSFCAG00000048015 ENSFCAG00000050208 RAB27B (ENSFCAG00000022264) #29 CCDC68 (ENSFCAG00000012086) #30 TCF4 (ENSFCAG00000014682) #31 TXNL1 (ENSFCAG00000022537) WDR7 (ENSFCAG00000011414) ST8SIA3 (ENSFCAG00000041173) ONECUT2 (ENSFCAG00000010819) NARS1 (ENSFCAG00000010822) ATP8B1 (ENSFCAG00000014301) Laurasiatheria_c ANCESTRAL SPECIES 24 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 Chiroptera ANCESTRAL SPECIES 26 ENSGT00950000183010.b ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Microchiroptera ANCESTRAL SPECIES 26 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Microbat DUPLICATION Microbat MODERN SPECIES 1271 ENSMLUG00000029997 #22 ENSMLUG00000009626 #22 MBD2 (ENSMLUG00000009980) #23 POLI (ENSMLUG00000010010) #24 C18orf54 (ENSMLUG00000008747) #26 ENSMLUG00000016488 ZNF24 (ENSMLUG00000016483) ENSMLUG00000014514 ENSMLUG00000025290 MAPRE2 (ENSMLUG00000016478) Microbat MODERN SPECIES 1271 ENSMLUG00000029997 #22 ENSMLUG00000009626 #22 MBD2 (ENSMLUG00000009980) #23 POLI (ENSMLUG00000010010) #24 C18orf54 (ENSMLUG00000008747) #26 ENSMLUG00000016488 ZNF24 (ENSMLUG00000016483) ENSMLUG00000014514 ENSMLUG00000025290 MAPRE2 (ENSMLUG00000016478) Greater horseshoe bat MODERN SPECIES 10 DYM (ENSRFEG00010014390) C18orf32 (ENSRFEG00010014487) LIPG (ENSRFEG00010014542) ACAA2 (ENSRFEG00010014660) MYO5B (ENSRFEG00010014892) CFAP53 (ENSRFEG00010015022) MBD1 (ENSRFEG00010015077) ##23 CXXC1 (ENSRFEG00010015320) SKA1 (ENSRFEG00010015982) MAPK4 (ENSRFEG00010016193) MRO (ENSRFEG00010016266) #16 ME2 (ENSRFEG00010016375) #17 ELAC1 (ENSRFEG00010016582) #18 SMAD4 (ENSRFEG00010016623) #19 MEX3C (ENSRFEG00010016751) #20 DCC (ENSRFEG00010016811) #22 MBD2 (ENSRFEG00010017760) #23 POLI (ENSRFEG00010017875) #24 STARD6 (ENSRFEG00010017932) #25 C18orf54 (ENSRFEG00010017994) #26 RAB27B (ENSRFEG00010018080) #29 CCDC68 (ENSRFEG00010018112) #30 TCF4 (ENSRFEG00010018296) #31 TXNL1 (ENSRFEG00010019852) WDR7 (ENSRFEG00010019915) ST8SIA3 (ENSRFEG00010020110) ONECUT2 (ENSRFEG00010020129) FECH (ENSRFEG00010020141) NARS1 (ENSRFEG00010020203) ATP8B1 (ENSRFEG00010020234) NEDD4L (ENSRFEG00010020297) Megabat MODERN SPECIES 2902 DCC (ENSPVAG00000003765) #22 Equus ANCESTRAL SPECIES 36 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT01090000263349 ENSGT00400000022381 #27 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00900000143822 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b Donkey MODERN SPECIES 27 DYM (ENSEASG00005015845) ENSEASG00005031152 ENSEASG00005025626 LIPG (ENSEASG00005005399) ACAA2 (ENSEASG00005005395) MYO5B (ENSEASG00005004025) ENSEASG00005003857 ##23 CXXC1 (ENSEASG00005003826) SKA1 (ENSEASG00005033486) MAPK4 (ENSEASG00005003821) MRO (ENSEASG00005003818) #16 ME2 (ENSEASG00005003813) #17 ELAC1 (ENSEASG00005003810) #18 SMAD4 (ENSEASG00005003805) #19 MEX3C (ENSEASG00005032865) #20 DCC (ENSEASG00005003571) #22 ENSEASG00005003504 #23 POLI (ENSEASG00005003488) #24 STARD6 (ENSEASG00005033368) #25 C18orf54 (ENSEASG00005003480) #26 ENSEASG00005003475 RAB27B (ENSEASG00005003468) #29 CCDC68 (ENSEASG00005003465) #30 TCF4 (ENSEASG00005003461) #31 ENSEASG00005037138 TXNL1 (ENSEASG00005003437) WDR7 (ENSEASG00005003421) ST8SIA3 (ENSEASG00005003406) ONECUT2 (ENSEASG00005027472) FECH (ENSEASG00005003401) NARS1 (ENSEASG00005003393) Horse MODERN SPECIES 29 LIPG (ENSECAG00000015140) ENSECAG00000059774 ACAA2 (ENSECAG00000019394) MYO5B (ENSECAG00000022515) CFAP53 (ENSECAG00000053670) MBD1 (ENSECAG00000011497) ##23 CXXC1 (ENSECAG00000017698) SKA1 (ENSECAG00000023484) MAPK4 (ENSECAG00000023749) MRO (ENSECAG00000002610) #16 ME2 (ENSECAG00000005517) #17 ELAC1 (ENSECAG00000016230) #18 SMAD4 (ENSECAG00000017857) #19 MEX3C (ENSECAG00000021727) #20 ENSECAG00000055237 DCC (ENSECAG00000021760) #22 MBD2 (ENSECAG00000022368) #23 POLI (ENSECAG00000004436) #24 STARD6 (ENSECAG00000011476) #25 C8H18orf54 (ENSECAG00000043788) #26 ENSECAG00000048982 DYNAP (ENSECAG00000039178) #27 ENSECAG00000037347 RAB27B (ENSECAG00000013138) #29 CCDC68 (ENSECAG00000015950) #30 TCF4 (ENSECAG00000017265) #31 TXNL1 (ENSECAG00000021822) WDR7 (ENSECAG00000007050) ST8SIA3 (ENSECAG00000011119) ONECUT2 (ENSECAG00000011345) FECH (ENSECAG00000012137) Atlantogenata ANCESTRAL SPECIES 22 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT01050000244995 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Afrotheria ANCESTRAL SPECIES 23 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Afrotheria_a ANCESTRAL SPECIES 22 ENSGT00390000018741 ENSGT00950000183010.a.a.a.b.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01100000263809 ENSGT00950000183005.a.a ##23 ENSGT00730000111044 ENSGT00390000011654 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00730000111785 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E Elephant MODERN SPECIES 375 RPL17 (ENSLAFG00000005569) LIPG (ENSLAFG00000003595) ACAA2 (ENSLAFG00000022796) MYO5B (ENSLAFG00000015591) ENSLAFG00000015611 MBD1 (ENSLAFG00000031328) ##23 CXXC1 (ENSLAFG00000030706) SKA1 (ENSLAFG00000005238) ENSLAFG00000026060 MAPK4 (ENSLAFG00000013022) MRO (ENSLAFG00000013029) #16 ME2 (ENSLAFG00000001536) #17 ELAC1 (ENSLAFG00000001538) #18 SMAD4 (ENSLAFG00000012595) #19 MEX3C (ENSLAFG00000027818) #20 DCC (ENSLAFG00000001980) #22 MBD2 (ENSLAFG00000014135) #23 POLI (ENSLAFG00000014138) #24 STARD6 (ENSLAFG00000014148) #25 C18orf54 (ENSLAFG00000014151) #26 ENSLAFG00000028483 ENSLAFG00000029901 RAB27B (ENSLAFG00000001220) #29 CCDC68 (ENSLAFG00000001222) #30 TCF4 (ENSLAFG00000013449) #31 TXNL1 (ENSLAFG00000009689) WDR7 (ENSLAFG00000015260) ST8SIA3 (ENSLAFG00000017954) ONECUT2 (ENSLAFG00000032649) FECH (ENSLAFG00000000056) NARS1 (ENSLAFG00000000559) Hyrax MODERN SPECIES 6538 DCC (ENSPCAG00000000173) #22 Tenrec MODERN SPECIES 7773 DCC (ENSETEG00000013210) #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000158867 #22 Sloth MODERN SPECIES 6958 DCC (ENSCHOG00000003385) #22 Armadillo MODERN SPECIES 2832 ENSDNOG00000036961 #22 AKR1B10 (ENSDNOG00000036011) BPGM (ENSDNOG00000004956) ENSDNOG00000044766 CALD1 (ENSDNOG00000038571) TMEM140 (ENSDNOG00000015106) CYREN (ENSDNOG00000015110) WDR91 (ENSDNOG00000015115) STRA8 (ENSDNOG00000003328) ENSDNOG00000033806 Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000008772 ENSGT00390000018741 ENSGT00950000183010.a.b.a.b.b.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01070000254624 ENSGT00940000164634 ENSGT00940000166139 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00390000008772 ENSGT00390000018741 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01070000254624 ENSGT00940000164634 ENSGT00940000166139 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Diprotodontia ANCESTRAL SPECIES 1 ENSGT00390000018741 ENSGT00950000183010.b ENSGT00950000183010.a.b.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01070000254624 ENSGT00940000164634 ENSGT00940000166139 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000008772 ENSGT00390000018741 ENSGT00950000183010.a.b.a.a.a.b ENSGT00940000159394 ENSGT01030000234626.D ENSGT00940000155402.a.b ENSGT01070000254624 ENSGT00940000164634 ENSGT00940000166139 ENSGT00940000159850 ENSGT00940000161642 #16 ENSGT00950000183134.c.b #17 ENSGT00730000111224 #18 ENSGT00940000157435 #19 ENSGT00940000160973 #20 ENSGT00940000158867 #22 ENSGT00950000183005.a.b #23 ENSGT00940000159487 #24 ENSGT00940000161788 #25 ENSGT00390000008823 #26 ENSGT00390000003755 ENSGT00940000157449 #29 ENSGT00950000183065.C #30 ENSGT00940000159129 #31 ENSGT00940000156170 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 koala MODERN SPECIES 224 ACAA2 (ENSPCIG00000028228) ENSPCIG00000033330 ENSPCIG00000032867 ENSPCIG00000003511 ENSPCIG00000003532 ENSPCIG00000003555 MAPK4 (ENSPCIG00000011553) ENSPCIG00000011548 #16 ME2 (ENSPCIG00000014963) #17 ELAC1 (ENSPCIG00000014958) #18 SMAD4 (ENSPCIG00000014951) #19 MEX3C (ENSPCIG00000031406) #20 ENSPCIG00000036208 DCC (ENSPCIG00000033928) #22 Common wonbat MODERN SPECIES 1028 SMAD7 (ENSVURG00010000339) DYM (ENSVURG00010000407) C18orf32 (ENSVURG00010000458) LIPG (ENSVURG00010000510) ACAA2 (ENSVURG00010000570) MYO5B (ENSVURG00010000687) ENSVURG00010000828 ENSVURG00010000841 ENSVURG00010000853 MAPK4 (ENSVURG00010001000) MRO (ENSVURG00010001023) #16 ME2 (ENSVURG00010001127) #17 ELAC1 (ENSVURG00010001144) #18 SMAD4 (ENSVURG00010001174) #19 MEX3C (ENSVURG00010001250) #20 DCC (ENSVURG00010001452) #22 MBD2 (ENSVURG00010001720) #23 POLI (ENSVURG00010001983) #24 STARD6 (ENSVURG00010002017) #25 ENSVURG00010002151 #26 ENSVURG00010002202 RAB27B (ENSVURG00010002263) #29 CCDC68 (ENSVURG00010002283) #30 TCF4 (ENSVURG00010002348) #31 ENSVURG00010003280 ENSVURG00010003325 TXNL1 (ENSVURG00010003367) WDR7 (ENSVURG00010003473) ST8SIA3 (ENSVURG00010003611) ONECUT2 (ENSVURG00010003616) FECH (ENSVURG00010003679) Wallaby MODERN SPECIES 9362 DCC (ENSMEUG00000003512) #22 Tasmanian devil MODERN SPECIES ENSSHAG00000030929 ENSSHAG00000003060 LIPG (ENSSHAG00000004911) ACAA2 (ENSSHAG00000001241) ENSSHAG00000003364 ENSSHAG00000010062 ENSSHAG00000026350 ENSSHAG00000010788 ENSSHAG00000013029 ENSSHAG00000008004 #16 ME2 (ENSSHAG00000014027) #17 ELAC1 (ENSSHAG00000028282) #18 SMAD4 (ENSSHAG00000010344) #19 MEX3C (ENSSHAG00000009408) #20 ENSSHAG00000024378 DCC (ENSSHAG00000012360) #22 ENSSHAG00000029668 #23 POLI (ENSSHAG00000004343) #24 STARD6 (ENSSHAG00000029009) #25 ENSSHAG00000001686 #26 RAB27B (ENSSHAG00000017123) #29 CCDC68 (ENSSHAG00000016955) #30 TCF4 (ENSSHAG00000014955) #31 TXNL1 (ENSSHAG00000005730) WDR7 (ENSSHAG00000002601) ST8SIA3 (ENSSHAG00000029418) ONECUT2 (ENSSHAG00000031060) FECH (ENSSHAG00000017884) NARS1 (ENSSHAG00000017850) ATP8B1 (ENSSHAG00000017716) NEDD4L (ENSSHAG00000016231) Opossum MODERN SPECIES 2 ENSMODG00000045710 ENSMODG00000047873 ENSMODG00000050985 ENSMODG00000000306 ENSMODG00000049107 PIK3C3 (ENSMODG00000000219) ENSMODG00000045630 ENSMODG00000036517 ENSMODG00000044611 RIT2 (ENSMODG00000000206) SYT4 (ENSMODG00000000187) ME2 (ENSMODG00000010968) #17 ELAC1 (ENSMODG00000010972) #18 SMAD4 (ENSMODG00000010995) #19 MEX3C (ENSMODG00000011001) #20 DCC (ENSMODG00000011028) #22 MBD2 (ENSMODG00000011041) #23 POLI (ENSMODG00000011046) #24 STARD6 (ENSMODG00000011055) #25 ENSMODG00000025604 #26 ENSMODG00000037484 ENSMODG00000003833 #16 MAPK4 (ENSMODG00000003819) ENSMODG00000003805 ENSMODG00000003795 ENSMODG00000003773 ENSMODG00000043831 MYO5B (ENSMODG00000003753) ACAA2 (ENSMODG00000003595) ENSMODG00000039010 LIPG (ENSMODG00000003564)