Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Primates	ANCESTRAL SPECIES	3	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898.a #29	ENSGT00550000074898.b ##29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00940000154172.gb.b.b.b #13	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898.a #29	ENSGT00550000074898.b ##29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00940000154172.gb.b.b.b #13	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898.a #29	ENSGT00550000074898.b ##29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Capuchin	MODERN SPECIES	228	HOXB6 (ENSCCAG00000022842) #7	HOXB5 (ENSCCAG00000036867) #8	HOXB4 (ENSCCAG00000020311) #9	HOXB3 (ENSCCAG00000013598) #10	HOXB2 (ENSCCAG00000024035) #11	HOXB1 (ENSCCAG00000027667) #12	ENSCCAG00000019181 #13	SKAP1 (ENSCCAG00000035663) #14	SNX11 (ENSCCAG00000030167) #15	CBX1 (ENSCCAG00000025085) #16	NFE2L1 (ENSCCAG00000029090) #17	COPZ2 (ENSCCAG00000021292) #18	CDK5RAP3 (ENSCCAG00000038053) #19	PNPO (ENSCCAG00000029175) #20	SP2 (ENSCCAG00000038047) #21	SP6 (ENSCCAG00000020330) #22	SCRN2 (ENSCCAG00000031435) #23	LRRC46 (ENSCCAG00000030568) #24	MRPL10 (ENSCCAG00000023150) #25	OSBPL7 (ENSCCAG00000034097) #26	TBX21 (ENSCCAG00000026112) #27	TBKBP1 (ENSCCAG00000026129) #28	ENSCCAG00000029263 #29	NPEPPS (ENSCCAG00000035472) #30	MRPL45 (ENSCCAG00000034579) #31	GPR179 (ENSCCAG00000037056) #32	SOCS7 (ENSCCAG00000033044) #33	ARHGAP23 (ENSCCAG00000025162) #34	SRCIN1 (ENSCCAG00000029783) #35	ENSCCAG00000023743 #36	MLLT6 (ENSCCAG00000028213) #37
Bolivian squirrel monkey	MODERN SPECIES	86	HOXB5 (ENSSBOG00000018198) #8	HOXB4 (ENSSBOG00000024432) #9	HOXB3 (ENSSBOG00000030844) #10	HOXB2 (ENSSBOG00000025070) #11	HOXB1 (ENSSBOG00000034875) #12	ENSSBOG00000019520 ##13	SKAP1 (ENSSBOG00000029434) #14	SNX11 (ENSSBOG00000026967) #15	ENSSBOG00000031880 ##16	NFE2L1 (ENSSBOG00000023867) #17	COPZ2 (ENSSBOG00000033633) #18	CDK5RAP3 (ENSSBOG00000033272) #19	PRR15L (ENSSBOG00000019240)	PNPO (ENSSBOG00000021213) #20	SP2 (ENSSBOG00000029098) #21	SP6 (ENSSBOG00000014210) #22	SCRN2 (ENSSBOG00000027391) #23	LRRC46 (ENSSBOG00000026980) #24	MRPL10 (ENSSBOG00000004214) #25	OSBPL7 (ENSSBOG00000033435) #26	TBX21 (ENSSBOG00000028744) #27	ENSSBOG00000029189 #28	ENSSBOG00000014766 ##13	KPNB1 (ENSSBOG00000030025) ##29	NPEPPS (ENSSBOG00000032725) #30	MRPL45 (ENSSBOG00000028242) #31	GPR179 (ENSSBOG00000022698) #32	SOCS7 (ENSSBOG00000031544) #33	ARHGAP23 (ENSSBOG00000017157) #34	ENSSBOG00000020882 #36	SRCIN1 (ENSSBOG00000015321) #35
Marmoset	MODERN SPECIES	17	HOXB4 (ENSCJAG00000007480) #9	HOXB3 (ENSCJAG00000007487) #10	HOXB2 (ENSCJAG00000007494) #11	HOXB1 (ENSCJAG00000007496) #12	ENSCJAG00000038853 #13	SKAP1 (ENSCJAG00000007504) #14	SNX11 (ENSCJAG00000039549) #15	CBX1 (ENSCJAG00000042052) #16	NFE2L1 (ENSCJAG00000007542) #17	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #18	CDK5RAP3 (ENSCJAG00000007669) #19	PRR15L (ENSCJAG00000044487)	PNPO (ENSCJAG00000007693) #20	SP2 (ENSCJAG00000007713) #21	SP6 (ENSCJAG00000043946) #22	SCRN2 (ENSCJAG00000047705) #23	LRRC46 (ENSCJAG00000007776) #24	MRPL10 (ENSCJAG00000007787) #25	OSBPL7 (ENSCJAG00000007585) #26	TBX21 (ENSCJAG00000007796) #27	TBKBP1 (ENSCJAG00000045710) #28	KPNB1 (ENSCJAG00000007834) ##29	NPEPPS (ENSCJAG00000007985) #30	ENSCJAG00000048573	MRPL45 (ENSCJAG00000008080) #31	GPR179 (ENSCJAG00000008100) #32	SOCS7 (ENSCJAG00000008108) #33	ENSCJAG00000008111	ARHGAP23 (ENSCJAG00000008112) #34	SRCIN1 (ENSCJAG00000008123) #35
Mas night monkey	MODERN SPECIES	481	HOXB6 (ENSANAG00000023964) #7	HOXB5 (ENSANAG00000024299) #8	HOXB4 (ENSANAG00000024005) #9	HOXB3 (ENSANAG00000032072) #10	HOXB2 (ENSANAG00000023626) #11	HOXB1 (ENSANAG00000032306) #12	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #14	SNX11 (ENSANAG00000022588) #15	ENSANAG00000036853 ##16	NFE2L1 (ENSANAG00000027606) #17	COPZ2 (ENSANAG00000023309) #18	CDK5RAP3 (ENSANAG00000021880) #19	PNPO (ENSANAG00000026080) #20	SP2 (ENSANAG00000032738) #21	SP6 (ENSANAG00000019338) #22	SCRN2 (ENSANAG00000021482) #23	LRRC46 (ENSANAG00000028496) #24	MRPL10 (ENSANAG00000022792) #25	OSBPL7 (ENSANAG00000021406) #26	TBX21 (ENSANAG00000037999) #27	TBKBP1 (ENSANAG00000020710) #28	ENSANAG00000024932 #29	ENSANAG00000019395	NPEPPS (ENSANAG00000028371) #30	MRPL45 (ENSANAG00000028167) #31	GPR179 (ENSANAG00000033667) #32	SOCS7 (ENSANAG00000028278) #33	ARHGAP23 (ENSANAG00000026348) #34	ENSANAG00000022130 #36	SRCIN1 (ENSANAG00000027395) #35
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713.h.b #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246.i #30	ENSGT00940000155246.j.b.b #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713.h.a #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246.i #30	ENSGT00940000155246.j.b.b #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713.h.a.a.b #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246.j.b.a #30	ENSGT00390000004027	ENSGT01090000259987.b.b.a.a.b	ENSGT01030000234570.d.b.a.b.a	ENSGT00950000182950.C.a.a	ENSGT00940000155111.h	ENSGT00530000063282.t.h.a.b.d	ENSGT00390000010523.c.a
Gorilla	MODERN SPECIES	18	HOXB7 (ENSGGOG00000002637)	HOXB6 (ENSGGOG00000002634) #7	HOXB5 (ENSGGOG00000023582) #8	HOXB3 (ENSGGOG00000012838) #10	HOXB2 (ENSGGOG00000009910) #11	HOXB1 (ENSGGOG00000009904) #12	SKAP1 (ENSGGOG00000012624) #14	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #16	NFE2L1 (ENSGGOG00000002268) #17	COPZ2 (ENSGGOG00000002264) #18	ENSGGOG00000022994 #19	PRR15L (ENSGGOG00000037816)	PNPO (ENSGGOG00000003786) #20	SP2 (ENSGGOG00000005330) #21	SP6 (ENSGGOG00000036261) #22	SCRN2 (ENSGGOG00000004547) #23	LRRC46 (ENSGGOG00000012667) #24	MRPL10 (ENSGGOG00000015353) #25	OSBPL7 (ENSGGOG00000015344) #26	TBX21 (ENSGGOG00000002208) #27	TBKBP1 (ENSGGOG00000002206) #28	KPNB1 (ENSGGOG00000008089) #29	ENSGGOG00000022991 #30	EFCAB13 (ENSGGOG00000022715)	ENSGGOG00000023488	ITGB3 (ENSGGOG00000007757)	MYL4 (ENSGGOG00000009722)	CDC27 (ENSGGOG00000014729)	ENSGGOG00000040439	RPRML (ENSGGOG00000000099)
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713.h.a.a.b #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246.j.b.a #30	ENSGT00390000004027	ENSGT01090000259987.b.b.a.a.b	ENSGT01030000234570.d.b.a.b.a	ENSGT00950000182950.C.a.b.a	ENSGT00950000182950.C.a.a	ENSGT00530000063282.t.h.a.b.d	ENSGT00390000010523.c.a
Pan	ANCESTRAL SPECIES	3	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713.h.a.a.b #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246.j.b.a #30	ENSGT00940000153464.A.b.b	ENSGT00390000004027	ENSGT01090000259987.b.b.a.a.b	ENSGT01030000234570.d.b.a.b.a	ENSGT00950000182950.C.a.a	ENSGT00530000063282.t.h.a.b.d	ENSGT00390000010523.c.a
Chimpanzee	MODERN SPECIES	8	HOXB6 (ENSPTRG00000009356) #7	HOXB5 (ENSPTRG00000009355) #8	HOXB4 (ENSPTRG00000009354) #9	HOXB3 (ENSPTRG00000052423) #10	HOXB2 (ENSPTRG00000009352) #11	HOXB1 (ENSPTRG00000009351) #12	SKAP1 (ENSPTRG00000009350) #14	SNX11 (ENSPTRG00000009349) #15	CBX1 (ENSPTRG00000052115) #16	NFE2L1 (ENSPTRG00000022631) #17	COPZ2 (ENSPTRG00000009346) #18	CDK5RAP3 (ENSPTRG00000009345) #19	PRR15L (ENSPTRG00000047216)	PNPO (ENSPTRG00000009343) #20	SP2 (ENSPTRG00000009342) #21	SP6 (ENSPTRG00000009340) #22	SCRN2 (ENSPTRG00000009339) #23	LRRC46 (ENSPTRG00000009338) #24	MRPL10 (ENSPTRG00000009337) #25	OSBPL7 (ENSPTRG00000009336) #26	TBX21 (ENSPTRG00000009335) #27	TBKBP1 (ENSPTRG00000009334) #28	KPNB1 (ENSPTRG00000009333) #29	NPEPPS (ENSPTRG00000009330) #30	ENSPTRG00000048037	ENSPTRG00000045761	EFCAB13 (ENSPTRG00000009329)	MYL4 (ENSPTRG00000024314)	CDC27 (ENSPTRG00000009326)	ENSPTRG00000051416	ENSPTRG00000052446
Bonobo	MODERN SPECIES	8	HOXB6 (ENSPPAG00000032229) #7	HOXB5 (ENSPPAG00000039181) #8	HOXB4 (ENSPPAG00000040659) #9	HOXB3 (ENSPPAG00000032630) #10	HOXB2 (ENSPPAG00000027417) #11	HOXB1 (ENSPPAG00000039129) #12	SKAP1 (ENSPPAG00000039277) #14	SNX11 (ENSPPAG00000033185) #15	ENSPPAG00000030413 #16	NFE2L1 (ENSPPAG00000031737) #17	COPZ2 (ENSPPAG00000043351) #18	ENSPPAG00000029145 #19	PRR15L (ENSPPAG00000003316)	PNPO (ENSPPAG00000038148) #20	SP2 (ENSPPAG00000027065) #21	SP6 (ENSPPAG00000026169) #22	SCRN2 (ENSPPAG00000028214) #23	LRRC46 (ENSPPAG00000038983) #24	MRPL10 (ENSPPAG00000034452) #25	OSBPL7 (ENSPPAG00000027887) #26	TBX21 (ENSPPAG00000033988) #27	ENSPPAG00000040088 #28	KPNB1 (ENSPPAG00000028842) #29	ENSPPAG00000041383 #30	ENSPPAG00000031240	ENSPPAG00000041328	ENSPPAG00000019537	ITGB3 (ENSPPAG00000030328)	MYL4 (ENSPPAG00000032176)	CDC27 (ENSPPAG00000035989)	RPRML (ENSPPAG00000021337)
Human	MODERN SPECIES	8	HOXB6 (ENSG00000108511) #7	HOXB5 (ENSG00000120075) #8	HOXB4 (ENSG00000182742) #9	HOXB3 (ENSG00000120093) #10	HOXB2 (ENSG00000173917) #11	HOXB1 (ENSG00000120094) #12	SKAP1 (ENSG00000141293) #14	SNX11 (ENSG00000002919) #15	CBX1 (ENSG00000108468) #16	NFE2L1 (ENSG00000082641) #17	COPZ2 (ENSG00000005243) #18	CDK5RAP3 (ENSG00000108465) #19	PRR15L (ENSG00000167183)	PNPO (ENSG00000108439) #20	SP2 (ENSG00000167182) #21	SP6 (ENSG00000189120) #22	SCRN2 (ENSG00000141295) #23	LRRC46 (ENSG00000141294) #24	MRPL10 (ENSG00000159111) #25	OSBPL7 (ENSG00000006025) #26	TBX21 (ENSG00000073861) #27	TBKBP1 (ENSG00000198933) #28	KPNB1 (ENSG00000108424) #29	NPEPPS (ENSG00000141279) #30	EFCAB13 (ENSG00000178852)	ITGB3 (ENSG00000259207)	MYL4 (ENSG00000198336)	CDC27 (ENSG00000004897)	RPRML (ENSG00000179673)	GOSR2 (ENSG00000108433)	WNT9B (ENSG00000158955)
Orangutan	MODERN SPECIES	8	HOXB6 (ENSPPYG00000008899) #7	HOXB5 (ENSPPYG00000008898) #8	HOXB4 (ENSPPYG00000008897) #9	HOXB3 (ENSPPYG00000008896) #10	HOXB2 (ENSPPYG00000008895) #11	HOXB1 (ENSPPYG00000008894) #12	SKAP1 (ENSPPYG00000008893) #14	SNX11 (ENSPPYG00000008892) #15	ENSPPYG00000008891 ##16	NFE2L1 (ENSPPYG00000036998) #17	ENSPPYG00000008889 #18	CDK5RAP3 (ENSPPYG00000008888) #19	PRR15L (ENSPPYG00000008887)	PNPO (ENSPPYG00000040967) #20	SP2 (ENSPPYG00000008885) #21	SP6 (ENSPPYG00000008884) #22	SCRN2 (ENSPPYG00000008883) #23	LRRC46 (ENSPPYG00000032761) #24	MRPL10 (ENSPPYG00000008881) #25	OSBPL7 (ENSPPYG00000008880) #26	TBX21 (ENSPPYG00000008879) #27	TBKBP1 (ENSPPYG00000008878) #28	KPNB1 (ENSPPYG00000025935) #29	NPEPPS (ENSPPYG00000008877) #30	MRPL45 (ENSPPYG00000008876) #31	GPR179 (ENSPPYG00000008874) #32	ENSPPYG00000039847	SOCS7 (ENSPPYG00000008873) #33	ARHGAP23 (ENSPPYG00000008872) #34	SRCIN1 (ENSPPYG00000008871) #35	ENSPPYG00000032356 #36
Gibbon	MODERN SPECIES	105	ENSNLEG00000029075	HOXB6 (ENSNLEG00000002585) #7	HOXB5 (ENSNLEG00000002574) #8	HOXB4 (ENSNLEG00000002570) #9	HOXB2 (ENSNLEG00000002566) #11	ENSNLEG00000018815 #12	SKAP1 (ENSNLEG00000002519) #14	SNX11 (ENSNLEG00000002479) #15	ENSNLEG00000002435 #16	NFE2L1 (ENSNLEG00000002415) #17	ENSNLEG00000002409 #18	ENSNLEG00000002109 #19	PRR15L (ENSNLEG00000002102)	PNPO (ENSNLEG00000002062) #20	ENSNLEG00000002058 #21	SP6 (ENSNLEG00000002050) #22	SCRN2 (ENSNLEG00000001940) #23	LRRC46 (ENSNLEG00000001902) #24	MRPL10 (ENSNLEG00000001803) #25	OSBPL7 (ENSNLEG00000001657) #26	ENSNLEG00000001655 #27	ENSNLEG00000032565 #28	KPNB1 (ENSNLEG00000001446) #29
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Sooty mangabey	MODERN SPECIES	564	HOXB5 (ENSCATG00000027616) #8	HOXB3 (ENSCATG00000031126) #10	HOXB4 (ENSCATG00000040704) #9	HOXB2 (ENSCATG00000035238) #11	HOXB1 (ENSCATG00000035575) #12	SKAP1 (ENSCATG00000044458) #14	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #15	ENSCATG00000034735 ##16	NFE2L1 (ENSCATG00000040775) #17	COPZ2 (ENSCATG00000042708) #18	CDK5RAP3 (ENSCATG00000006699) #19	PRR15L (ENSCATG00000020186)	PNPO (ENSCATG00000039934) #20	ENSCATG00000003341 #21	SP6 (ENSCATG00000020123) #22	SCRN2 (ENSCATG00000038846) #23	LRRC46 (ENSCATG00000031406) #24	MRPL10 (ENSCATG00000035686) #25	OSBPL7 (ENSCATG00000033623) #26	TBX21 (ENSCATG00000010529) #27	TBKBP1 (ENSCATG00000040564) #28	KPNB1 (ENSCATG00000037124) #29	NPEPPS (ENSCATG00000011160) #30	ENSCATG00000005112 #31	GPR179 (ENSCATG00000016000) #32	SOCS7 (ENSCATG00000038123) #33	ARHGAP23 (ENSCATG00000031687) #34	SRCIN1 (ENSCATG00000035063) #35	ENSCATG00000032235 #36	EPOP (ENSCATG00000021365)
Drill	MODERN SPECIES	1297	HOXB6 (ENSMLEG00000029580) #7	HOXB5 (ENSMLEG00000009970) #8	HOXB3 (ENSMLEG00000026268) #10	HOXB4 (ENSMLEG00000029897) #9	HOXB2 (ENSMLEG00000031955) #11	HOXB1 (ENSMLEG00000037557) #12	SKAP1 (ENSMLEG00000029308) #14	SNX11 (ENSMLEG00000039008) #15	CBX1 (ENSMLEG00000038745) #16	NFE2L1 (ENSMLEG00000039330) #17	COPZ2 (ENSMLEG00000039090) #18	CDK5RAP3 (ENSMLEG00000033869) #19	PRR15L (ENSMLEG00000020212)	PNPO (ENSMLEG00000040872) #20	SP2 (ENSMLEG00000032228) #21	SP6 (ENSMLEG00000027177) #22	SCRN2 (ENSMLEG00000041491) #23	LRRC46 (ENSMLEG00000031583) #24	MRPL10 (ENSMLEG00000042780) #25	OSBPL7 (ENSMLEG00000040663) #26
Olive baboon	MODERN SPECIES	8	HOXB6 (ENSPANG00000022891) #7	HOXB5 (ENSPANG00000022889) #8	HOXB4 (ENSPANG00000022888) #9	ENSPANG00000045928	HOXB2 (ENSPANG00000034765) #11	HOXB1 (ENSPANG00000022886) #12	SKAP1 (ENSPANG00000022897) #14	ENSPANG00000026200	SNX11 (ENSPANG00000022898) #15	CBX1 (ENSPANG00000022906) #16	NFE2L1 (ENSPANG00000022904) #17	COPZ2 (ENSPANG00000022903) #18	CDK5RAP3 (ENSPANG00000022902) #19	PNPO (ENSPANG00000022924) #20	SP2 (ENSPANG00000022922) #21	SP6 (ENSPANG00000017158) #22	SCRN2 (ENSPANG00000022920) #23	LRRC46 (ENSPANG00000022918) #24	MRPL10 (ENSPANG00000022926) #25	OSBPL7 (ENSPANG00000022928) #26	TBX21 (ENSPANG00000022107) #27	TBKBP1 (ENSPANG00000022108) #28	KPNB1 (ENSPANG00000022099) #29	NPEPPS (ENSPANG00000022080) #30	MRPL45 (ENSPANG00000022083) #31	GPR179 (ENSPANG00000022074) #32	SOCS7 (ENSPANG00000022062) #33	ARHGAP23 (ENSPANG00000022030) #34	SRCIN1 (ENSPANG00000022035) #35	ENSPANG00000041026	EPOP (ENSPANG00000041909)
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.n #31	ENSGT00940000160776 #32	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.a.b	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Rhesus	MODERN SPECIES	7	HOXB5 (ENSMMUG00000051420) #8	ENSMMUG00000045203	HOXB4 (ENSMMUG00000052130) #9	HOXB2 (ENSMMUG00000057001) #11	HOXB1 (ENSMMUG00000022212) #12	SKAP1 (ENSMMUG00000050742) #14	SNX11 (ENSMMUG00000020658) #15	CBX1 (ENSMMUG00000019882) #16	NFE2L1 (ENSMMUG00000021935) #17	COPZ2 (ENSMMUG00000021934) #18	CDK5RAP3 (ENSMMUG00000004760) #19	PRR15L (ENSMMUG00000050551)	PNPO (ENSMMUG00000003325) #20	SP2 (ENSMMUG00000004765) #21	ENSMMUG00000053935	SP6 (ENSMMUG00000061952) #22	MRPL10 (ENSMMUG00000021486) #23	LRRC46 (ENSMMUG00000061605) #24	OSBPL7 (ENSMMUG00000019039) #26	TBX21 (ENSMMUG00000057231) #27	TBKBP1 (ENSMMUG00000019762) #28	KPNB1 (ENSMMUG00000019760) #29	NPEPPS (ENSMMUG00000005869) #30	MRPL45 (ENSMMUG00000030213) #31	GPR179 (ENSMMUG00000020528) #32	ENSMMUG00000055904	SOCS7 (ENSMMUG00000020531) #33	ARHGAP23 (ENSMMUG00000020020) #34	SRCIN1 (ENSMMUG00000005041) #35	EPOP (ENSMMUG00000013378)	MLLT6 (ENSMMUG00000002637) #37
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000062776	HOXB2 (ENSMFAG00000034146) #11	HOXB1 (ENSMFAG00000052359) #12	SKAP1 (ENSMFAG00000038763) #14	ENSMFAG00000048147	ENSMFAG00000047205	SNX11 (ENSMFAG00000001845) #15	CBX1 (ENSMFAG00000036790) #16	NFE2L1 (ENSMFAG00000035583) #17	COPZ2 (ENSMFAG00000045896) #18	CDK5RAP3 (ENSMFAG00000046364) #19	PRR15L (ENSMFAG00000030161)	PNPO (ENSMFAG00000039285) #20	SP2 (ENSMFAG00000038712) #21	ENSMFAG00000052999	SP6 (ENSMFAG00000030247) #22	ENSMFAG00000030335 #23	LRRC46 (ENSMFAG00000031915) #24	OSBPL7 (ENSMFAG00000001330) #26	TBX21 (ENSMFAG00000042504) #27	TBKBP1 (ENSMFAG00000001252) #28	KPNB1 (ENSMFAG00000030197) #29	NPEPPS (ENSMFAG00000003608) #30	MRPL45 (ENSMFAG00000043718) #31	GPR179 (ENSMFAG00000002774) #32	ENSMFAG00000064016	SOCS7 (ENSMFAG00000044702) #33	ENSMFAG00000062343	ENSMFAG00000049053	SRCIN1 (ENSMFAG00000031842) #35	MLLT6 (ENSMFAG00000039477) #37
Pig-tailed macaque	MODERN SPECIES	494	HOXB5 (ENSMNEG00000039003) #8	HOXB4 (ENSMNEG00000032435) #9	HOXB3 (ENSMNEG00000032425) #10	HOXB2 (ENSMNEG00000043416) #11	HOXB1 (ENSMNEG00000036848) #12	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #14	SNX11 (ENSMNEG00000034920) #15	CBX1 (ENSMNEG00000039720) #16	NFE2L1 (ENSMNEG00000037921) #17	COPZ2 (ENSMNEG00000038720) #18	CDK5RAP3 (ENSMNEG00000029039) #19	PRR15L (ENSMNEG00000028174)	PNPO (ENSMNEG00000037010) #20	SP2 (ENSMNEG00000029577) #21	SP6 (ENSMNEG00000023861) #22	SCRN2 (ENSMNEG00000031786) #23	LRRC46 (ENSMNEG00000037035) #24	MRPL10 (ENSMNEG00000030905) #25	OSBPL7 (ENSMNEG00000042829) #26	TBX21 (ENSMNEG00000036627) #27	TBKBP1 (ENSMNEG00000039009) #28	KPNB1 (ENSMNEG00000040927) #29	NPEPPS (ENSMNEG00000000757) #30	ENSMNEG00000044663 #31	GPR179 (ENSMNEG00000042928) #32	SOCS7 (ENSMNEG00000032316) #33	ARHGAP23 (ENSMNEG00000037605) #34	ENSMNEG00000035424 #36	SRCIN1 (ENSMNEG00000015519) #35	EPOP (ENSMNEG00000026740)
Vervet Monkey	MODERN SPECIES	7	HOXB5 (ENSCSAG00000002529) #8	HOXB4 (ENSCSAG00000002530) #9	HOXB3 (ENSCSAG00000002533) #10	HOXB2 (ENSCSAG00000002536) #11	HOXB1 (ENSCSAG00000002538) #12	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #14	SNX11 (ENSCSAG00000002545) #15	CBX1 (ENSCSAG00000002547) #16	NFE2L1 (ENSCSAG00000002550) #17	COPZ2 (ENSCSAG00000002558) #18	CDK5RAP3 (ENSCSAG00000002562) #19	PRR15L (ENSCSAG00000019042)	PNPO (ENSCSAG00000002565) #20	SP2 (ENSCSAG00000002567) #21	SP6 (ENSCSAG00000019041) #22	SCRN2 (ENSCSAG00000002569) #23	LRRC46 (ENSCSAG00000002574) #24	MRPL10 (ENSCSAG00000002576) #25	OSBPL7 (ENSCSAG00000002580) #26	TBX21 (ENSCSAG00000002587) #27	TBKBP1 (ENSCSAG00000002598) #28	KPNB1 (ENSCSAG00000002605) #29	NPEPPS (ENSCSAG00000002610) #30	ENSCSAG00000002616 #31	GPR179 (ENSCSAG00000002621) #32	SOCS7 (ENSCSAG00000002628) #33	ARHGAP23 (ENSCSAG00000002632) #34	SRCIN1 (ENSCSAG00000002635) #35	EPOP (ENSCSAG00000019040)	MLLT6 (ENSCSAG00000002640) #37
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603.b #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.m #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Black snub-nosed monkey	MODERN SPECIES	614																SP6 (ENSRBIG00000030852) #22	LRRC46 (ENSRBIG00000036612) #24	SCRN2 (ENSRBIG00000017158) #23	MRPL10 (ENSRBIG00000008990) #25	OSBPL7 (ENSRBIG00000042030) #26	TBX21 (ENSRBIG00000043622) #27	TBKBP1 (ENSRBIG00000042820) #28	KPNB1 (ENSRBIG00000002254) #29	NPEPPS (ENSRBIG00000031000) #30	MRPL45 (ENSRBIG00000042781) #31	GPR179 (ENSRBIG00000038216) #32	SOCS7 (ENSRBIG00000034893) #33	ARHGAP23 (ENSRBIG00000044119) #34	SRCIN1 (ENSRBIG00000044193) #35	EPOP (ENSRBIG00000041584)	MLLT6 (ENSRBIG00000042606) #37
Golden snub-nosed monkey	MODERN SPECIES	585	HOXB7 (ENSRROG00000035066)	HOXB6 (ENSRROG00000028093) #7	HOXB5 (ENSRROG00000030674) #8	HOXB3 (ENSRROG00000037630) #10	HOXB2 (ENSRROG00000044849) #11	HOXB1 (ENSRROG00000042747) #12	SKAP1 (ENSRROG00000031517) #14	SNX11 (ENSRROG00000029464) #15	CBX1 (ENSRROG00000041227) #16	NFE2L1 (ENSRROG00000044774) #17	COPZ2 (ENSRROG00000030969) #18	CDK5RAP3 (ENSRROG00000044651) #19	PRR15L (ENSRROG00000009484)	PNPO (ENSRROG00000044027) #20	SP2 (ENSRROG00000037481) #21	SP6 (ENSRROG00000008983) #22	SCRN2 (ENSRROG00000037252) #23	LRRC46 (ENSRROG00000039559) #24	MRPL10 (ENSRROG00000033938) #25	OSBPL7 (ENSRROG00000017659) #26
Tarsier	MODERN SPECIES	7208								SKAP1 (ENSTSYG00000008218) #14	SNX11 (ENSTSYG00000035487) #15	CBX1 (ENSTSYG00000034806) #16	NFE2L1 (ENSTSYG00000011468) #17	COPZ2 (ENSTSYG00000030074) #18	CDK5RAP3 (ENSTSYG00000010313) #19	PNPO (ENSTSYG00000002012) #20	SP2 (ENSTSYG00000013766) #21	SP6 (ENSTSYG00000031192) #22	SCRN2 (ENSTSYG00000003730) #23	LRRC46 (ENSTSYG00000003710) #24	MRPL10 (ENSTSYG00000034759) #25	OSBPL7 (ENSTSYG00000014378) #26
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590.h #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590.h #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Mouse lemur	MODERN SPECIES	7	HOXB6 (ENSMICG00000042216) #7	HOXB5 (ENSMICG00000047139) #8	HOXB4 (ENSMICG00000043173) #9	HOXB3 (ENSMICG00000007522) #10	HOXB2 (ENSMICG00000038222) #11	HOXB1 (ENSMICG00000048152) #12	SKAP1 (ENSMICG00000047158) #14	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #15	NFE2L1 (ENSMICG00000014716) #17	ENSMICG00000009510 #16	COPZ2 (ENSMICG00000014097) #18	CDK5RAP3 (ENSMICG00000014077) #19	ENSMICG00000014065 #20	SP2 (ENSMICG00000036051) #21	SP6 (ENSMICG00000047695) #22	SCRN2 (ENSMICG00000004823) #23	LRRC46 (ENSMICG00000004816) #24	MRPL10 (ENSMICG00000048091) #25	OSBPL7 (ENSMICG00000004799) #26	TBX21 (ENSMICG00000035345) #27	TBKBP1 (ENSMICG00000012069) #28	KPNB1 (ENSMICG00000012059) #29	NPEPPS (ENSMICG00000012034) #30	MRPL45 (ENSMICG00000000626) #31	GPR179 (ENSMICG00000000628) #32	SOCS7 (ENSMICG00000000636) #33	ARHGAP23 (ENSMICG00000000638) #34	SRCIN1 (ENSMICG00000000639) #35	MLLT6 (ENSMICG00000002976) #37	CISD3 (ENSMICG00000030046)
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590.h #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Coquerels sifaka	MODERN SPECIES	120	HOXB7 (ENSPCOG00000028248)	HOXB6 (ENSPCOG00000019931) #7	HOXB5 (ENSPCOG00000015692) #8	HOXB4 (ENSPCOG00000022963) #9	HOXB3 (ENSPCOG00000020113) #10	HOXB2 (ENSPCOG00000017380) #11	HOXB1 (ENSPCOG00000025930) #12	SKAP1 (ENSPCOG00000022221) #14	SNX11 (ENSPCOG00000011015) #15	ENSPCOG00000010902 #16	NFE2L1 (ENSPCOG00000021740) #17	COPZ2 (ENSPCOG00000018359) #18	CDK5RAP3 (ENSPCOG00000016598) #19	PNPO (ENSPCOG00000017906) #20	SP2 (ENSPCOG00000017198) #21	SP6 (ENSPCOG00000008529) #22	SCRN2 (ENSPCOG00000014438) #23	LRRC46 (ENSPCOG00000015829) #24	MRPL10 (ENSPCOG00000025492) #25	OSBPL7 (ENSPCOG00000019714) #26	TBX21 (ENSPCOG00000014387) #27	TBKBP1 (ENSPCOG00000026427) #28	KPNB1 (ENSPCOG00000026259) #29	ENSPCOG00000014331 #30	ENSPCOG00000027158 #30	MRPL45 (ENSPCOG00000014660) #31	GPR179 (ENSPCOG00000007958) #32	SOCS7 (ENSPCOG00000023874) #33	ARHGAP23 (ENSPCOG00000013530) #34	SRCIN1 (ENSPCOG00000008761) #35	MLLT6 (ENSPCOG00000016436) #37
Greater bamboo lemur	MODERN SPECIES	107								NFE2L1 (ENSPSMG00000007285) #17	ENSPSMG00000007339 #18	ENSPSMG00000007342	ENSPSMG00000007395 #19	PRR15L (ENSPSMG00000007406)	PNPO (ENSPSMG00000007445) #20	SP2 (ENSPSMG00000007456) #21	ENSPSMG00000007462 #21	SP6 (ENSPSMG00000007463) #22	SCRN2 (ENSPSMG00000007491) #23	LRRC46 (ENSPSMG00000007500) #24	MRPL10 (ENSPSMG00000007514) #25	OSBPL7 (ENSPSMG00000007730) #26	TBX21 (ENSPSMG00000007791) #27	TBKBP1 (ENSPSMG00000007810) #28	KPNB1 (ENSPSMG00000007848) #29	NPEPPS (ENSPSMG00000007984) #30	MRPL45 (ENSPSMG00000008060) #31	GPR179 (ENSPSMG00000008075) #32	SOCS7 (ENSPSMG00000008100) #33	ARHGAP23 (ENSPSMG00000008194) #34	SRCIN1 (ENSPSMG00000008297) #35	ENSPSMG00000008308 #36	EPOP (ENSPSMG00000008312)
Bushbaby	MODERN SPECIES	133	HOXB6 (ENSOGAG00000008661) #7	HOXB5 (ENSOGAG00000032432) #8	HOXB4 (ENSOGAG00000033709) #9	HOXB3 (ENSOGAG00000032090) #10	HOXB2 (ENSOGAG00000029280) #11	HOXB1 (ENSOGAG00000031645) #12	SKAP1 (ENSOGAG00000015855) #14	SNX11 (ENSOGAG00000015854) #15	CBX1 (ENSOGAG00000005658) #16	NFE2L1 (ENSOGAG00000025191) #17	COPZ2 (ENSOGAG00000004954) #18	CDK5RAP3 (ENSOGAG00000004951) #19	PRR15L (ENSOGAG00000006187)	PNPO (ENSOGAG00000006186) #20	SP2 (ENSOGAG00000030380) #21	SP6 (ENSOGAG00000030282) #22	SCRN2 (ENSOGAG00000006181) #23	LRRC46 (ENSOGAG00000006177) #24	MRPL10 (ENSOGAG00000006173) #25	OSBPL7 (ENSOGAG00000006166) #26	TBX21 (ENSOGAG00000006160) #27	TBKBP1 (ENSOGAG00000032523) #28	KPNB1 (ENSOGAG00000006153) #29	NPEPPS (ENSOGAG00000006365) #30	MRPL45 (ENSOGAG00000015816) #31	GPR179 (ENSOGAG00000031431) #32	SOCS7 (ENSOGAG00000012422) #33	ARHGAP23 (ENSOGAG00000030856) #34	SRCIN1 (ENSOGAG00000009948) #35	EPOP (ENSOGAG00000030366)	MLLT6 (ENSOGAG00000011422) #37
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Glires	ANCESTRAL SPECIES	3	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.a.a ##16	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.a.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Golden Hamster	MODERN SPECIES	674	Hoxb7 (ENSMAUG00000021297)	Hoxb6 (ENSMAUG00000021423) #7	Hoxb5 (ENSMAUG00000021419) #8	Hoxb4 (ENSMAUG00000009367) #9	Hoxb3 (ENSMAUG00000011251) #10	Hoxb2 (ENSMAUG00000021979) #11	Hoxb1 (ENSMAUG00000013237) #12	Skap1 (ENSMAUG00000022191) #14	Snx11 (ENSMAUG00000021528) #15	ENSMAUG00000003463 #16	Nfe2l1 (ENSMAUG00000020456) #17	Copz2 (ENSMAUG00000010560) #18	Cdk5rap3 (ENSMAUG00000007991) #19	Pnpo (ENSMAUG00000021706) #20	Sp2 (ENSMAUG00000019269) #21	Sp6 (ENSMAUG00000009667) #22	Scrn2 (ENSMAUG00000010014) #23	Lrrc46 (ENSMAUG00000019416) #24	Mrpl10 (ENSMAUG00000000820) #25	Osbpl7 (ENSMAUG00000013876) #26	Tbx21 (ENSMAUG00000017507) #27	Tbkbp1 (ENSMAUG00000018604) #28	Kpnb1 (ENSMAUG00000006211) #29	Npepps (ENSMAUG00000017383) #30	Mrpl45 (ENSMAUG00000021636) #31	ENSMAUG00000015632 #32	Socs7 (ENSMAUG00000015461) #33	Arhgap23 (ENSMAUG00000018856) #34	Srcin1 (ENSMAUG00000021175) #35	Epop (ENSMAUG00000015662)	ENSMAUG00000019155
Chinese hamster chok1gshd	MODERN SPECIES	33	Hoxb5 (ENSCGRG00001016167) #8	Hoxb4 (ENSCGRG00001022431) #9	Hoxb3 (ENSCGRG00001016667) #10	Hoxb2 (ENSCGRG00001017587) #11	Hoxb1 (ENSCGRG00001024619) #12	ENSCGRG00001023355 #14	ENSCGRG00001020759 #14	Snx11 (ENSCGRG00001022221) #15	Cbx1 (ENSCGRG00001014799) ##16	Nfe2l1 (ENSCGRG00001015287) #17	Copz2 (ENSCGRG00001014767) #18	Cdk5rap3 (ENSCGRG00001006966) #19	Prr15l (ENSCGRG00001008926)	Pnpo (ENSCGRG00001018189) #20	Sp2 (ENSCGRG00001010976) #21	Sp6 (ENSCGRG00001002797) #22	Scrn2 (ENSCGRG00001022143) #23	Lrrc46 (ENSCGRG00001019758) #24	Mrpl10 (ENSCGRG00001024199) #25	Osbpl7 (ENSCGRG00001013737) #26	Tbx21 (ENSCGRG00001008276) #27	Tbkbp1 (ENSCGRG00001018526) #28	Kpnb1 (ENSCGRG00001016042) #29	Npepps (ENSCGRG00001005930) #30	Mrpl45 (ENSCGRG00001000066) #31	Gpr179 (ENSCGRG00001014708) #32	Socs7 (ENSCGRG00001021949) #33	Arhgap23 (ENSCGRG00001018199) #34	Srcin1 (ENSCGRG00001017021) #35	ENSCGRG00001002748	Epop (ENSCGRG00001011711)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Northern American deer mouse	MODERN SPECIES	21	Hoxb4 (ENSPEMG00000029805) #9	Hoxb3 (ENSPEMG00000028692) #10	Hoxb2 (ENSPEMG00000029510) #11	Hoxb1 (ENSPEMG00000023977) #12	Skap1 (ENSPEMG00000000585) #14	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #15	Cbx1 (ENSPEMG00000020976) ##16	Nfe2l1 (ENSPEMG00000010512) #17	Copz2 (ENSPEMG00000011137) #18	Cdk5rap3 (ENSPEMG00000020712) #19	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436)	Pnpo (ENSPEMG00000025094) #20	Sp2 (ENSPEMG00000017112) #21	Sp6 (ENSPEMG00000001231) #22	Scrn2 (ENSPEMG00000020381) #23	Lrrc46 (ENSPEMG00000020507) #24	Mrpl10 (ENSPEMG00000014613) #25	Osbpl7 (ENSPEMG00000001423) #26	Tbx21 (ENSPEMG00000010056) #27	Tbkbp1 (ENSPEMG00000027762) #28	Kpnb1 (ENSPEMG00000017783) #29	Npepps (ENSPEMG00000012220) #30	Mrpl45 (ENSPEMG00000005654) #31	ENSPEMG00000027307 #32	Socs7 (ENSPEMG00000000521) #33	Arhgap23 (ENSPEMG00000004296) #34	Srcin1 (ENSPEMG00000014663) #35	Epop (ENSPEMG00000026437)	Mllt6 (ENSPEMG00000015310) #37
Prairie vole	MODERN SPECIES	114	Hoxb6 (ENSMOCG00000020355) #7	Hoxb5 (ENSMOCG00000014523) #8	Hoxb4 (ENSMOCG00000022964) #9	Hoxb3 (ENSMOCG00000020739) #10	Hoxb2 (ENSMOCG00000014846) #11	Hoxb1 (ENSMOCG00000002452) #12	Skap1 (ENSMOCG00000018431) #14	Snx11 (ENSMOCG00000019303) #15	Cbx1 (ENSMOCG00000001520) #16	Nfe2l1 (ENSMOCG00000016002) #17	Copz2 (ENSMOCG00000022427) #18	Cdk5rap3 (ENSMOCG00000019534) #19	Prr15l (ENSMOCG00000006695)	Pnpo (ENSMOCG00000011655) #20	Sp2 (ENSMOCG00000020935) #21	Sp6 (ENSMOCG00000007065) #22	Scrn2 (ENSMOCG00000019511) #23	Lrrc46 (ENSMOCG00000016707) #24	Mrpl10 (ENSMOCG00000019451) #25	Osbpl7 (ENSMOCG00000021054) #26	Tbx21 (ENSMOCG00000004097) #27	Tbkbp1 (ENSMOCG00000017020) #28	Kpnb1 (ENSMOCG00000003683) #29	Npepps (ENSMOCG00000011600) #30	Mrpl45 (ENSMOCG00000002139) #31	ENSMOCG00000022822 #32	Socs7 (ENSMOCG00000015144) #33	Arhgap23 (ENSMOCG00000005846) #34	Srcin1 (ENSMOCG00000017212) #35	Epop (ENSMOCG00000020613)	Mllt6 (ENSMOCG00000002332) #37
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00800000125316	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00800000125316	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00800000125316	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Mouse	MODERN SPECIES	2	Hoxb6 (ENSMUSG00000000690) #7	Hoxb5 (ENSMUSG00000038700) #8	Hoxb4 (ENSMUSG00000038692) #9	Hoxb3 (ENSMUSG00000048763) #10	Hoxb2 (ENSMUSG00000075588) #11	Hoxb1 (ENSMUSG00000018973) #12	Skap1 (ENSMUSG00000057058) #14	Snx11 (ENSMUSG00000020876) #15	Cbx1 (ENSMUSG00000018666) #16	Nfe2l1 (ENSMUSG00000038615) #17	Copz2 (ENSMUSG00000018672) #18	Cdk5rap3 (ENSMUSG00000018669) #19	Prr15l (ENSMUSG00000047040)	Pnpo (ENSMUSG00000018659) #20	Sp2 (ENSMUSG00000018678) #21	Sp6 (ENSMUSG00000038560) #22	Scrn2 (ENSMUSG00000020877) #23	Lrrc46 (ENSMUSG00000020878) #24	Mrpl10 (ENSMUSG00000001445) #25	Osbpl7 (ENSMUSG00000038534) #26	Tbx21 (ENSMUSG00000001444) #27	Tbkbp1 (ENSMUSG00000038517) #28	Kpnb1 (ENSMUSG00000001440) #29	Npepps (ENSMUSG00000001441) #30	Mrpl45 (ENSMUSG00000018882) #31	Gpr179 (ENSMUSG00000070337) #32	Socs7 (ENSMUSG00000038485) #33	Arhgap23 (ENSMUSG00000049807) #34	Srcin1 (ENSMUSG00000038453) #35	Epop (ENSMUSG00000043439)	Mllt6 (ENSMUSG00000038437) #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00800000125316	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
spretus	MODERN SPECIES	2	Hoxb5 (MGP_SPRETEiJ_G0017874) #8	Hoxb4 (MGP_SPRETEiJ_G0017875) #9	Hoxb3 (MGP_SPRETEiJ_G0017876) #10	Hoxb2 (MGP_SPRETEiJ_G0017877) #11	Hoxb1 (MGP_SPRETEiJ_G0017878) #12	MGP_SPRETEiJ_G0017879 #14	Snx11 (MGP_SPRETEiJ_G0017880) #15	Cbx1 (MGP_SPRETEiJ_G0017881) #16	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #17	Copz2 (MGP_SPRETEiJ_G0017884) #18	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #19	Prr15l (MGP_SPRETEiJ_G0017886)	Pnpo (MGP_SPRETEiJ_G0017887) #20	Sp2 (MGP_SPRETEiJ_G0017888) #21	Sp6 (MGP_SPRETEiJ_G0017889) #22	Scrn2 (MGP_SPRETEiJ_G0017890) #23	Lrrc46 (MGP_SPRETEiJ_G0017891) #24	Mrpl10 (MGP_SPRETEiJ_G0017892) #25	Osbpl7 (MGP_SPRETEiJ_G0017893) #26	Tbx21 (MGP_SPRETEiJ_G0017894) #27	Tbkbp1 (MGP_SPRETEiJ_G0017895) #28	Kpnb1 (MGP_SPRETEiJ_G0017896) #29	Npepps (MGP_SPRETEiJ_G0017897) #30	Mrpl45 (MGP_SPRETEiJ_G0017898) #31	Gpr179 (MGP_SPRETEiJ_G0017899) #32	Socs7 (MGP_SPRETEiJ_G0017900) #33	Arhgap23 (MGP_SPRETEiJ_G0017901) #34	MGP_SPRETEiJ_G0017902	Srcin1 (MGP_SPRETEiJ_G0017903) #35	Epop (MGP_SPRETEiJ_G0017904)
Steppe mouse	MODERN SPECIES	3291	Hoxb4 (ENSMSIG00000018777) #9	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #10	Hoxb2 (ENSMSIG00000018769) #11	Hoxb1 (ENSMSIG00000018752) #12	Skap1 (ENSMSIG00000018601) #14	Snx11 (ENSMSIG00000018546) #15	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #16	Nfe2l1 (ENSMSIG00000018374) #17	Copz2 (ENSMSIG00000018337) #18	Cdk5rap3 (ENSMSIG00000018309) #19	ENSMSIG00000018270	ENSMSIG00000018267 #20	Sp2 (ENSMSIG00000018237) #21	Sp6 (ENSMSIG00000018223) #22	Scrn2 (ENSMSIG00000018202) #23	Lrrc46 (ENSMSIG00000018171) #24	Mrpl10 (ENSMSIG00000018160) #25	Osbpl7 (ENSMSIG00000018093) #26	Tbx21 (ENSMSIG00000018069) #27	Tbkbp1 (ENSMSIG00000018040) #28	Kpnb1 (ENSMSIG00000017971) #29	Npepps (ENSMSIG00000017886) #30	Mrpl45 (ENSMSIG00000017873) #31	Gpr179 (ENSMSIG00000017852) #32	Socs7 (ENSMSIG00000017810) #33	ENSMSIG00000017794	Arhgap23 (ENSMSIG00000017701) #34	Srcin1 (ENSMSIG00000017360) #35	Epop (ENSMSIG00000017344)
Ryukyu mouse	MODERN SPECIES	2	Hoxb5 (MGP_CAROLIEiJ_G0017028) #8	Hoxb4 (MGP_CAROLIEiJ_G0017029) #9	Hoxb3 (MGP_CAROLIEiJ_G0017030) #10	Hoxb2 (MGP_CAROLIEiJ_G0017031) #11	Hoxb1 (MGP_CAROLIEiJ_G0017032) #12	Skap1 (MGP_CAROLIEiJ_G0017033) #14	Snx11 (MGP_CAROLIEiJ_G0017034) #15	Cbx1 (MGP_CAROLIEiJ_G0017035) #16	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #17	Copz2 (MGP_CAROLIEiJ_G0017038) #18	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #19	Prr15l (MGP_CAROLIEiJ_G0017040)	Pnpo (MGP_CAROLIEiJ_G0017041) #20	Sp2 (MGP_CAROLIEiJ_G0017042) #21	Sp6 (MGP_CAROLIEiJ_G0017043) #22	MGP_CAROLIEiJ_G0017044 #23	Lrrc46 (MGP_CAROLIEiJ_G0017045) #24	Mrpl10 (MGP_CAROLIEiJ_G0017046) #25	Osbpl7 (MGP_CAROLIEiJ_G0017047) #26	Tbx21 (MGP_CAROLIEiJ_G0017048) #27	Tbkbp1 (MGP_CAROLIEiJ_G0017049) #28	Kpnb1 (MGP_CAROLIEiJ_G0017050) #29	Npepps (MGP_CAROLIEiJ_G0017051) #30	Mrpl45 (MGP_CAROLIEiJ_G0017052) #31	Gpr179 (MGP_CAROLIEiJ_G0017053) #32	Socs7 (MGP_CAROLIEiJ_G0017054) #33	Arhgap23 (MGP_CAROLIEiJ_G0017055) #34	MGP_CAROLIEiJ_G0017056	Srcin1 (MGP_CAROLIEiJ_G0017057) #35	Epop (MGP_CAROLIEiJ_G0017058)
Shrew mouse	MODERN SPECIES	5	Hoxb5 (MGP_PahariEiJ_G0018158) #8	Hoxb4 (MGP_PahariEiJ_G0018159) #9	Hoxb3 (MGP_PahariEiJ_G0018160) #10	Hoxb2 (MGP_PahariEiJ_G0018161) #11	Hoxb1 (MGP_PahariEiJ_G0018162) #12	Skap1 (MGP_PahariEiJ_G0018163) #14	Snx11 (MGP_PahariEiJ_G0018164) #15	Cbx1 (MGP_PahariEiJ_G0018165) #16	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #17	Copz2 (MGP_PahariEiJ_G0018168) #18	Cdk5rap3 (MGP_PahariEiJ_G0018169) #19	Prr15l (MGP_PahariEiJ_G0018170)	Pnpo (MGP_PahariEiJ_G0018171) #20	Sp2 (MGP_PahariEiJ_G0018172) #21	Sp6 (MGP_PahariEiJ_G0018173) #22	Scrn2 (MGP_PahariEiJ_G0018174) #23	Lrrc46 (MGP_PahariEiJ_G0018175) #24	Mrpl10 (MGP_PahariEiJ_G0018176) #25	Osbpl7 (MGP_PahariEiJ_G0018177) #26	Tbx21 (MGP_PahariEiJ_G0018178) #27	Tbkbp1 (MGP_PahariEiJ_G0018179) #28	Npepps (MGP_PahariEiJ_G0018180) #30	MGP_PahariEiJ_G0018181 #31	Gpr179 (MGP_PahariEiJ_G0018182) #32	Socs7 (MGP_PahariEiJ_G0018183) #33	Arhgap23 (MGP_PahariEiJ_G0018184) #34	MGP_PahariEiJ_G0018185	Srcin1 (MGP_PahariEiJ_G0018186) #35	Epop (MGP_PahariEiJ_G0018187)	Mllt6 (MGP_PahariEiJ_G0018188) #37
Rat	MODERN SPECIES	1	Hoxb6 (ENSRNOG00000007823) #7	Hoxb5 (ENSRNOG00000008010) #8	Hoxb4 (ENSRNOG00000008191) #9	Hoxb3 (ENSRNOG00000008313) #10	Hoxb2 (ENSRNOG00000008365) #11	Hoxb1 (ENSRNOG00000008506) #12	Skap1 (ENSRNOG00000023881) #14	Snx11 (ENSRNOG00000008642) #15	Cbx1 (ENSRNOG00000008689) #16	Nfe2l1 (ENSRNOG00000008830) #17	Copz2 (ENSRNOG00000009225) #18	Cdk5rap3 (ENSRNOG00000048747) #19	Prr15l (ENSRNOG00000049162)	Pnpo (ENSRNOG00000046493) #20	Sp2 (ENSRNOG00000010492) #21	Sp6 (ENSRNOG00000023551) #22	Scrn2 (ENSRNOG00000010214) #23	Lrrc46 (ENSRNOG00000009902) #24	Mrpl10 (ENSRNOG00000009567) #25	Osbpl7 (ENSRNOG00000009473) #26	Tbx21 (ENSRNOG00000009427) #27	Tbkbp1 (ENSRNOG00000009370) #28	Kpnb1 (ENSRNOG00000009275) #29	AABR07030425.1 (ENSRNOG00000056057)	Npepps (ENSRNOG00000023095) #30	Mrpl45 (ENSRNOG00000010540) #31	Gpr179 (ENSRNOG00000029245) #32	Socs7 (ENSRNOG00000059008) #33	Arhgap23 (ENSRNOG00000022771) #34	Srcin1 (ENSRNOG00000011475) #35	Epop (ENSRNOG00000048187)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Hoxb5 (ENSNGAG00000023238) #8	Hoxb4 (ENSNGAG00000021768) #9	Hoxb3 (ENSNGAG00000020227) #10	Hoxb2 (ENSNGAG00000019089) #11	Hoxb1 (ENSNGAG00000018593) #12	Skap1 (ENSNGAG00000012571) #14	Snx11 (ENSNGAG00000010446) #15	Cbx1 (ENSNGAG00000006760) #16	Nfe2l1 (ENSNGAG00000000736) #17	Copz2 (ENSNGAG00000023713) #18	ENSNGAG00000000747 #19	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432)	Pnpo (ENSNGAG00000020016) #20	Sp2 (ENSNGAG00000017612) #21	Sp6 (ENSNGAG00000015868) #22	Scrn2 (ENSNGAG00000023806) #23	Lrrc46 (ENSNGAG00000022557) #24	Mrpl10 (ENSNGAG00000022195) #25	Osbpl7 (ENSNGAG00000019382) #26	Tbx21 (ENSNGAG00000002476) #27	Tbkbp1 (ENSNGAG00000021163) #28	Kpnb1 (ENSNGAG00000017610) #29	Plekhm1 (ENSNGAG00000013194)	Arhgap27 (ENSNGAG00000021239)	Map3k14 (ENSNGAG00000018057)	Efcab15 (ENSNGAG00000014012)	Fmnl1 (ENSNGAG00000018866)	Hexim2 (ENSNGAG00000008154)	Hexim1 (ENSNGAG00000004671)	Acbd4 (ENSNGAG00000003147)
Lesser Egyptian jerboa	MODERN SPECIES	56	Hoxb6 (ENSJJAG00000000997) #7	Hoxb5 (ENSJJAG00000000763) #8	Hoxb4 (ENSJJAG00000002642) #9	Hoxb3 (ENSJJAG00000007804) #10	Hoxb2 (ENSJJAG00000009465) #11	Hoxb1 (ENSJJAG00000001073) #12	Skap1 (ENSJJAG00000003458) #14	ENSJJAG00000005754 #15	ENSJJAG00000007753 #16	Nfe2l1 (ENSJJAG00000006432) #17	Copz2 (ENSJJAG00000001025) #18	ENSJJAG00000002511 #19	Prr15l (ENSJJAG00000006478)	Pnpo (ENSJJAG00000023608) #20	Sp2 (ENSJJAG00000003061) #21	Sp6 (ENSJJAG00000006452) #22	Scrn2 (ENSJJAG00000023635) #23	Lrrc46 (ENSJJAG00000010412) #24	Mrpl10 (ENSJJAG00000004046) #25	Osbpl7 (ENSJJAG00000004477) #26	Tbx21 (ENSJJAG00000000813) #27	ENSJJAG00000010141 #28	Kpnb1 (ENSJJAG00000010909) #29	Npepps (ENSJJAG00000005423) #30	ENSJJAG00000009505	ENSJJAG00000002004 #32	Socs7 (ENSJJAG00000007563) #33	ENSJJAG00000002946 #34	Srcin1 (ENSJJAG00000000573) #35	Epop (ENSJJAG00000023234)	Mllt6 (ENSJJAG00000000902) #37
Kangaroo rat	MODERN SPECIES	326	Hoxb8 (ENSDORG00000007906)	Hoxb7 (ENSDORG00000007905)	Hoxb6 (ENSDORG00000023877) #7	Hoxb5 (ENSDORG00000007900) #8	Hoxb4 (ENSDORG00000007899) #9	Hoxb3 (ENSDORG00000007898) #10	Hoxb2 (ENSDORG00000007897) #11	Hoxb1 (ENSDORG00000007896) #12	Snx11 (ENSDORG00000029078) #15	Cbx1 (ENSDORG00000026399) #16	Nfe2l1 (ENSDORG00000000715) #17	Copz2 (ENSDORG00000013441) #18	Prr15l (ENSDORG00000027427)	Pnpo (ENSDORG00000014110) #20	Sp2 (ENSDORG00000014109) #21	Sp6 (ENSDORG00000026201) #22	Scrn2 (ENSDORG00000002361) #23	Osbpl7 (ENSDORG00000002354) #26	Tbx21 (ENSDORG00000013302) #27	Npepps (ENSDORG00000009627) #30	Socs7 (ENSDORG00000028979) #33	ENSDORG00000007713 #34	Srcin1 (ENSDORG00000007714) #35	Mllt6 (ENSDORG00000016578) #37	Cisd3 (ENSDORG00000029439)	Pcgf2 (ENSDORG00000016581)	Psmb3 (ENSDORG00000009809)	Pip4k2b (ENSDORG00000009810)	Cwc25 (ENSDORG00000003061)	1700001P01Rik (ENSDORG00000013037)	Rpl23 (ENSDORG00000001372)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.o #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.o #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Arctic ground squirrel	MODERN SPECIES	46	HOXB6 (ENSUPAG00010006317) #7	HOXB5 (ENSUPAG00010006320) #8	HOXB4 (ENSUPAG00010006325) #9	HOXB3 (ENSUPAG00010006328) #10	HOXB2 (ENSUPAG00010006336) #11	HOXB1 (ENSUPAG00010006340) #12	SKAP1 (ENSUPAG00010006345) #14	SNX11 (ENSUPAG00010006370) #15	CBX1 (ENSUPAG00010006381) #16	NFE2L1 (ENSUPAG00010006396) #17	COPZ2 (ENSUPAG00010006455) #18	CDK5RAP3 (ENSUPAG00010006466) #19	PRR15L (ENSUPAG00010006473)	PNPO (ENSUPAG00010006483) #20	SP2 (ENSUPAG00010006507) #21	SP6 (ENSUPAG00010006522) #22	SCRN2 (ENSUPAG00010006526) #23	LRRC46 (ENSUPAG00010006533) #24	MRPL10 (ENSUPAG00010006539) #25	OSBPL7 (ENSUPAG00010006545) #26	TBX21 (ENSUPAG00010006582) #27	TBKBP1 (ENSUPAG00010006591) #28	KPNB1 (ENSUPAG00010006624) #29	NPEPPS (ENSUPAG00010006649) #30	ENSUPAG00010006685 #31	GPR179 (ENSUPAG00010006698) #32	SOCS7 (ENSUPAG00010006716) #33	ARHGAP23 (ENSUPAG00010006763) #34	SRCIN1 (ENSUPAG00010006849) #35	MLLT6 (ENSUPAG00010006969) #37	CISD3 (ENSUPAG00010007056)
Squirrel	MODERN SPECIES	90	HOXB6 (ENSSTOG00000020303) #7	HOXB5 (ENSSTOG00000009740) #8	HOXB4 (ENSSTOG00000009734) #9	HOXB3 (ENSSTOG00000025093) #10	HOXB2 (ENSSTOG00000023586) #11	HOXB1 (ENSSTOG00000028630) #12	SKAP1 (ENSSTOG00000013692) #14	SNX11 (ENSSTOG00000013684) #15	CBX1 (ENSSTOG00000023986) #16	NFE2L1 (ENSSTOG00000013664) #17	ENSSTOG00000027550 #18	CDK5RAP3 (ENSSTOG00000006244) #19	PRR15L (ENSSTOG00000006235)	PNPO (ENSSTOG00000006221) #20	SP2 (ENSSTOG00000015926) #21	SP6 (ENSSTOG00000001607) #22	SCRN2 (ENSSTOG00000027108) #23	LRRC46 (ENSSTOG00000002068) #24	MRPL10 (ENSSTOG00000024617) #25	OSBPL7 (ENSSTOG00000001636) #26	TBX21 (ENSSTOG00000001626) #27	TBKBP1 (ENSSTOG00000023713) #28	KPNB1 (ENSSTOG00000007896) #29	NPEPPS (ENSSTOG00000004901) #30	ENSSTOG00000000304 #31	GPR179 (ENSSTOG00000024299) #32	SOCS7 (ENSSTOG00000000068) #33	ARHGAP23 (ENSSTOG00000029240) #34	SRCIN1 (ENSSTOG00000028994) #35	EPOP (ENSSTOG00000022964)	MLLT6 (ENSSTOG00000014229) #37
Alpin marmot	MODERN SPECIES	126													PRR15L (ENSMMMG00000020424)	PNPO (ENSMMMG00000020407) #20	SP2 (ENSMMMG00000020394) #21	SP6 (ENSMMMG00000020386) #22	SCRN2 (ENSMMMG00000020372) #23	LRRC46 (ENSMMMG00000020356) #24	MRPL10 (ENSMMMG00000020352) #25	OSBPL7 (ENSMMMG00000020336) #26	ENSMMMG00000020333	TBX21 (ENSMMMG00000020329) #27	ENSMMMG00000020322 #28	KPNB1 (ENSMMMG00000020318) #29	NPEPPS (ENSMMMG00000020297) #30	ENSMMMG00000020288 #31	GPR179 (ENSMMMG00000020262) #32	SOCS7 (ENSMMMG00000020236) #33	ARHGAP23 (ENSMMMG00000020178) #34	ENSMMMG00000020172 #36	SRCIN1 (ENSMMMG00000020155) #35
Eurasian red squirrel	MODERN SPECIES	12	HOXB6 (ENSSVLG00005019586) #7	HOXB5 (ENSSVLG00005019546) #8	HOXB4 (ENSSVLG00005019455) #9	HOXB3 (ENSSVLG00005019421) #10	HOXB2 (ENSSVLG00005019378) #11	HOXB1 (ENSSVLG00005019304) #12	SKAP1 (ENSSVLG00005019232) #14	SNX11 (ENSSVLG00005019122) #15	CBX1 (ENSSVLG00005019034) #16	NFE2L1 (ENSSVLG00005018798) #17	COPZ2 (ENSSVLG00005018641) #18	CDK5RAP3 (ENSSVLG00005018459) #19	PRR15L (ENSSVLG00005018399)	PNPO (ENSSVLG00005018295) #20	ENSSVLG00005018218 #21	SP6 (ENSSVLG00005018194) #22	SCRN2 (ENSSVLG00005018077) #23	LRRC46 (ENSSVLG00005018036) #24	MRPL10 (ENSSVLG00005017985) #25	OSBPL7 (ENSSVLG00005017757) #26	TBX21 (ENSSVLG00005017653) #27	TBKBP1 (ENSSVLG00005017602) #28	KPNB1 (ENSSVLG00005017557) #29	NPEPPS (ENSSVLG00005017198) #30	MRPL45 (ENSSVLG00005017084) #31	ENSSVLG00005017021	GPR179 (ENSSVLG00005016761) #32	SOCS7 (ENSSVLG00005016676) #33	ARHGAP23 (ENSSVLG00005016593) #34	SRCIN1 (ENSSVLG00005016103) #35	ENSSVLG00005016032
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Guinea pig	MODERN SPECIES	53	HOXB6 (ENSCPOG00000040707) #7	HOXB5 (ENSCPOG00000030746) #8	ENSCPOG00000010105	ENSCPOG00000010107 #10	HOXB2 (ENSCPOG00000035468) #11	HOXB1 (ENSCPOG00000022183) #12	SKAP1 (ENSCPOG00000022118) #14	SNX11 (ENSCPOG00000020234) #15	CBX1 (ENSCPOG00000034435) #16	NFE2L1 (ENSCPOG00000030805) #17	COPZ2 (ENSCPOG00000019500) #18	CDK5RAP3 (ENSCPOG00000007275) #19	PRR15L (ENSCPOG00000035567)	PNPO (ENSCPOG00000003187) #20	SP2 (ENSCPOG00000014943) #21	SP6 (ENSCPOG00000007638) #22	SCRN2 (ENSCPOG00000006929) #23	LRRC46 (ENSCPOG00000006925) #24	MRPL10 (ENSCPOG00000037104) #25	OSBPL7 (ENSCPOG00000006914) #26	TBX21 (ENSCPOG00000026273) #27	TBKBP1 (ENSCPOG00000036345) #28	KPNB1 (ENSCPOG00000006566) #29	NPEPPS (ENSCPOG00000006559) #30	MRPL45 (ENSCPOG00000001574) #31	GPR179 (ENSCPOG00000027503) #32	SOCS7 (ENSCPOG00000011473) #33	ARHGAP23 (ENSCPOG00000025821) #34	SRCIN1 (ENSCPOG00000022478) #35	EPOP (ENSCPOG00000026798)	MLLT6 (ENSCPOG00000006561) #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000158572 #37	ENSGT00390000004574
Degu	MODERN SPECIES	97	HOXB6 (ENSODEG00000016988) #7	HOXB5 (ENSODEG00000017253) #8	HOXB4 (ENSODEG00000017038) #9	HOXB3 (ENSODEG00000017116) #10	HOXB2 (ENSODEG00000017153) #11	HOXB1 (ENSODEG00000017050) #12	SKAP1 (ENSODEG00000017533) #14	SNX11 (ENSODEG00000017458) #15	CBX1 (ENSODEG00000017272) #16	NFE2L1 (ENSODEG00000017348) #17	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #18	ENSODEG00000017229 #19	PNPO (ENSODEG00000017424) #20	SP2 (ENSODEG00000017126) #21	SP6 (ENSODEG00000017625) #22	SCRN2 (ENSODEG00000017395) #23	LRRC46 (ENSODEG00000017367) #24	MRPL10 (ENSODEG00000017536) #25	OSBPL7 (ENSODEG00000017364) #26	TBX21 (ENSODEG00000017610) #27	ENSODEG00000017455 #28	KPNB1 (ENSODEG00000017287) #29	NPEPPS (ENSODEG00000017337) #30	SOCS7 (ENSODEG00000017559) #33	MRPL45 (ENSODEG00000017631) #31	GPR179 (ENSODEG00000017327) #32	ARHGAP23 (ENSODEG00000017612) #34	SRCIN1 (ENSODEG00000017506) #35	MLLT6 (ENSODEG00000017604) #37	CISD3 (ENSODEG00000017593)
Long-tailed chinchilla	MODERN SPECIES	158	HOXB6 (ENSCLAG00000015524) #7	HOXB5 (ENSCLAG00000014374) #8	HOXB4 (ENSCLAG00000014725) #9	HOXB3 (ENSCLAG00000015322) #10	HOXB2 (ENSCLAG00000015271) #11	HOXB1 (ENSCLAG00000013047) #12	SKAP1 (ENSCLAG00000015423) #14	SNX11 (ENSCLAG00000015837) #15	CBX1 (ENSCLAG00000013587) #16	NFE2L1 (ENSCLAG00000014836) #17	COPZ2 (ENSCLAG00000013544) #18	CDK5RAP3 (ENSCLAG00000012292) #19	PRR15L (ENSCLAG00000017903)	PNPO (ENSCLAG00000013871) #20	SP2 (ENSCLAG00000014115) #21	SP6 (ENSCLAG00000016276) #22	LRRC46 (ENSCLAG00000016713) #24	SCRN2 (ENSCLAG00000013965) #23	MRPL10 (ENSCLAG00000015400) #25	OSBPL7 (ENSCLAG00000014839) #26	TBX21 (ENSCLAG00000015235) #27	ENSCLAG00000015338 #28	KPNB1 (ENSCLAG00000017091) #29	NPEPPS (ENSCLAG00000016661) #30	MRPL45 (ENSCLAG00000015324) #31	GPR179 (ENSCLAG00000014803) #32	SOCS7 (ENSCLAG00000015232) #33	ARHGAP23 (ENSCLAG00000014290) #34	SRCIN1 (ENSCLAG00000015589) #35	MLLT6 (ENSCLAG00000013781) #37	CISD3 (ENSCLAG00000014350)
Naked mole-rat female	MODERN SPECIES	12	HOXB6 (ENSHGLG00000012400) #7	HOXB5 (ENSHGLG00000039265) #8	HOXB4 (ENSHGLG00000034075) #9	HOXB3 (ENSHGLG00000010686) #10	HOXB2 (ENSHGLG00000010090) #11	HOXB1 (ENSHGLG00000009781) #12	SKAP1 (ENSHGLG00000014563) #14	SNX11 (ENSHGLG00000016837) #15	CBX1 (ENSHGLG00000013574) #16	NFE2L1 (ENSHGLG00000012592) #17	COPZ2 (ENSHGLG00000018543) #18	CDK5RAP3 (ENSHGLG00000019464) #19	PRR15L (ENSHGLG00000014696)	PNPO (ENSHGLG00000013159) #20	SP2 (ENSHGLG00000009902) #21	SP6 (ENSHGLG00000021113) #22	SCRN2 (ENSHGLG00000041375) #23	LRRC46 (ENSHGLG00000035931) #24	MRPL10 (ENSHGLG00000048399) #25	OSBPL7 (ENSHGLG00000012525) #26	TBX21 (ENSHGLG00000012216) #27	TBKBP1 (ENSHGLG00000049817) #28	KPNB1 (ENSHGLG00000014138) #29	ENSHGLG00000012466 #30	ENSHGLG00000010863 #31	ENSHGLG00000050482	ENSHGLG00000041148 #32	SOCS7 (ENSHGLG00000035093) #33	ARHGAP23 (ENSHGLG00000012944) #34	SRCIN1 (ENSHGLG00000010912) #35	ENSHGLG00000021180
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000161529	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.dc #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000158572 #37	ENSGT00390000004574
Rabbit	MODERN SPECIES	10	HOXB8 (ENSOCUG00000029186)	HOXB5 (ENSOCUG00000023093) #8	HOXB6 (ENSOCUG00000011560) #7	HOXB3 (ENSOCUG00000023337) #10	HOXB2 (ENSOCUG00000024951) #11	HOXB1 (ENSOCUG00000001720) #12	SKAP1 (ENSOCUG00000001717) #14	SNX11 (ENSOCUG00000002309) #15	CBX1 (ENSOCUG00000008021) #16	NFE2L1 (ENSOCUG00000022298) #17	COPZ2 (ENSOCUG00000001802) #18	CDK5RAP3 (ENSOCUG00000012325) #19	PRR15L (ENSOCUG00000017489)	PNPO (ENSOCUG00000017484) #20	SP2 (ENSOCUG00000027415) #21	SP6 (ENSOCUG00000023482) #22	SCRN2 (ENSOCUG00000009457) #23	LRRC46 (ENSOCUG00000009453) #24	MRPL10 (ENSOCUG00000009452) #25	OSBPL7 (ENSOCUG00000009447) #26	TBX21 (ENSOCUG00000012907) #27	TBKBP1 (ENSOCUG00000014771) #28	KPNB1 (ENSOCUG00000015425) #29	NPEPPS (ENSOCUG00000015748) #30	MRPL45 (ENSOCUG00000015690) #31	GPR179 (ENSOCUG00000015704) #32	SOCS7 (ENSOCUG00000015724) #33	ARHGAP23 (ENSOCUG00000011758) #34	SRCIN1 (ENSOCUG00000005505) #35	MLLT6 (ENSOCUG00000027604) #37	CISD3 (ENSOCUG00000022623)
Pika	MODERN SPECIES	633													CDK5RAP3 (ENSOPRG00000004107) #19	PNPO (ENSOPRG00000004080) #20	SP2 (ENSOPRG00000004048) #21	SP6 (ENSOPRG00000004019) #22	SCRN2 (ENSOPRG00000003992) #23	LRRC46 (ENSOPRG00000003963) #24	MRPL10 (ENSOPRG00000003949) #25	OSBPL7 (ENSOPRG00000003904) #26	TBX21 (ENSOPRG00000003888) #27	TBKBP1 (ENSOPRG00000003843) #28	KPNB1 (ENSOPRG00000003795) #29	NPEPPS (ENSOPRG00000003735) #30
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Suina	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Pig	MODERN SPECIES	3	HOXB6 (ENSSSCG00000017539) #7	HOXB5 (ENSSSCG00000017540) #8	HOXB4 (ENSSSCG00000017535) #9	HOXB3 (ENSSSCG00000017534) #10	HOXB2 (ENSSSCG00000017533) #11	HOXB1 (ENSSSCG00000017532) #12	SKAP1 (ENSSSCG00000017527) #14	SNX11 (ENSSSCG00000017528) #15	CBX1 (ENSSSCG00000017529) #16	NFE2L1 (ENSSSCG00000017525) #17	COPZ2 (ENSSSCG00000017526) #18	CDK5RAP3 (ENSSSCG00000017524) #19	PRR15L (ENSSSCG00000054179)	PNPO (ENSSSCG00000032782) #20	SP2 (ENSSSCG00000017516) #21	SP6 (ENSSSCG00000017522) #22	SCRN2 (ENSSSCG00000017521) #23	LRRC46 (ENSSSCG00000017520) #24	MRPL10 (ENSSSCG00000017519) #25	OSBPL7 (ENSSSCG00000017518) #26	TBX21 (ENSSSCG00000017517) #27	ENSSSCG00000057498 #28	KPNB1 (ENSSSCG00000017514) #29	NPEPPS (ENSSSCG00000017513) #30	MRPL45 (ENSSSCG00000023263) #31	GPR179 (ENSSSCG00000020884) #32	SOCS7 (ENSSSCG00000018057) #33	ARHGAP23 (ENSSSCG00000018058) #34	ENSSSCG00000045701	ENSSSCG00000046446 #36	SRCIN1 (ENSSSCG00000018056) #35
Chacoan peccary	MODERN SPECIES	145	HOXB6 (ENSCWAG00000022069) #7	HOXB5 (ENSCWAG00000022071) #8	HOXB4 (ENSCWAG00000022074) #9	HOXB3 (ENSCWAG00000022077) #10	HOXB2 (ENSCWAG00000022078) #11	HOXB1 (ENSCWAG00000022080) #12	SKAP1 (ENSCWAG00000000046) #14	SNX11 (ENSCWAG00000000070) #15	CBX1 (ENSCWAG00000000121) #16	NFE2L1 (ENSCWAG00000000185) #17	COPZ2 (ENSCWAG00000000341) #18	CDK5RAP3 (ENSCWAG00000000377) #19	PRR15L (ENSCWAG00000000410)	PNPO (ENSCWAG00000000427) #20	SP2 (ENSCWAG00000000474) #21	SP6 (ENSCWAG00000000502) #22	SCRN2 (ENSCWAG00000000520) #23	LRRC46 (ENSCWAG00000000570) #24	MRPL10 (ENSCWAG00000000589) #25	OSBPL7 (ENSCWAG00000000623) #26	TBX21 (ENSCWAG00000000709) #27	TBKBP1 (ENSCWAG00000000726) #28	KPNB1 (ENSCWAG00000000755) #29	NPEPPS (ENSCWAG00000000826) #30	MRPL45 (ENSCWAG00000000905) #31	GPR179 (ENSCWAG00000000941) #32	SOCS7 (ENSCWAG00000001002) #33	ARHGAP23 (ENSCWAG00000001049) #34	SRCIN1 (ENSCWAG00000001149) #35	EPOP (ENSCWAG00000001220)	MLLT6 (ENSCWAG00000001240) #37
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00860000135964 #36	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Narwhal	MODERN SPECIES	316	HOXB6 (ENSMMNG00015016215) #7	HOXB5 (ENSMMNG00015016235) #8	HOXB4 (ENSMMNG00015016252) #9	HOXB3 (ENSMMNG00015016287) #10	HOXB2 (ENSMMNG00015016324) #11	HOXB1 (ENSMMNG00015016356) #12	SKAP1 (ENSMMNG00015016386) #14	SNX11 (ENSMMNG00015016452) #15	CBX1 (ENSMMNG00015016582) #16	NFE2L1 (ENSMMNG00015016634) #17	COPZ2 (ENSMMNG00015016743) #18	CDK5RAP3 (ENSMMNG00015016820) #19	PRR15L (ENSMMNG00015016868)	PNPO (ENSMMNG00015016895) #20	SP2 (ENSMMNG00015016948) #21	SP6 (ENSMMNG00015016969) #22	SCRN2 (ENSMMNG00015016985) #23	LRRC46 (ENSMMNG00015017038) #24	MRPL10 (ENSMMNG00015017084) #25	OSBPL7 (ENSMMNG00015017115) #26	TBX21 (ENSMMNG00015017166) #27	TBKBP1 (ENSMMNG00015017190) #28	KPNB1 (ENSMMNG00015017215) #29	NPEPPS (ENSMMNG00015017277) #30	MRPL45 (ENSMMNG00015017435) #31	GPR179 (ENSMMNG00015017480) #32	SOCS7 (ENSMMNG00015017571) #33	ARHGAP23 (ENSMMNG00015017676) #34	SRCIN1 (ENSMMNG00015017795) #35	ENSMMNG00015017965 #36	EPOP (ENSMMNG00015017989)
Beluga whale	MODERN SPECIES	26	HOXB5 (ENSDLEG00000004826) #8	HOXB4 (ENSDLEG00000004820) #9	HOXB3 (ENSDLEG00000004817) #10	HOXB2 (ENSDLEG00000004813) #11	HOXB1 (ENSDLEG00000004807) #12	SKAP1 (ENSDLEG00000004779) #14	SNX11 (ENSDLEG00000004765) #15	CBX1 (ENSDLEG00000004754) ##16	NFE2L1 (ENSDLEG00000004744) #17	ENSDLEG00000004734	COPZ2 (ENSDLEG00000004721) #18	CDK5RAP3 (ENSDLEG00000004709) #19	PRR15L (ENSDLEG00000004704)	PNPO (ENSDLEG00000004701) #20	SP2 (ENSDLEG00000004697) #21	SP6 (ENSDLEG00000004694) #22	SCRN2 (ENSDLEG00000004688) #23	ENSDLEG00000004684	MRPL10 (ENSDLEG00000004678) #25	OSBPL7 (ENSDLEG00000004366) #26	TBX21 (ENSDLEG00000004247) #27	TBKBP1 (ENSDLEG00000004240) #28	KPNB1 (ENSDLEG00000004223) #29	NPEPPS (ENSDLEG00000004076) #30	MRPL45 (ENSDLEG00000004037) #31	GPR179 (ENSDLEG00000004032) #32	SOCS7 (ENSDLEG00000004014) #33	ARHGAP23 (ENSDLEG00000003989) #34	ENSDLEG00000003976 #36	SRCIN1 (ENSDLEG00000003944) #35	ENSDLEG00000003932
Vaquita	MODERN SPECIES	12	HOXB6 (ENSPSNG00000017525) #7	HOXB5 (ENSPSNG00000017559) #8	HOXB4 (ENSPSNG00000017604) #9	HOXB3 (ENSPSNG00000017636) #10	HOXB2 (ENSPSNG00000017708) #11	HOXB1 (ENSPSNG00000017728) #12	SKAP1 (ENSPSNG00000017760) #14	SNX11 (ENSPSNG00000017889) #15	ENSPSNG00000017984 #16	NFE2L1 (ENSPSNG00000018052) #17	COPZ2 (ENSPSNG00000018262) #18	CDK5RAP3 (ENSPSNG00000018321) #19	PRR15L (ENSPSNG00000018399)	PNPO (ENSPSNG00000018423) #20	SP2 (ENSPSNG00000018528) #21	SP6 (ENSPSNG00000018568) #22	SCRN2 (ENSPSNG00000018588) #23	LRRC46 (ENSPSNG00000018676) #24	ENSPSNG00000018757	OSBPL7 (ENSPSNG00000018799) #26	TBX21 (ENSPSNG00000018852) #27	TBKBP1 (ENSPSNG00000018911) #28	KPNB1 (ENSPSNG00000018946) #29	NPEPPS (ENSPSNG00000019016) #30	MRPL45 (ENSPSNG00000019227) #31	GPR179 (ENSPSNG00000019300) #32	SOCS7 (ENSPSNG00000019467) #33	ARHGAP23 (ENSPSNG00000019589) #34	SRCIN1 (ENSPSNG00000019720) #35	ENSPSNG00000020092 #36	EPOP (ENSPSNG00000020118)
Dolphin	MODERN SPECIES	6789														PNPO (ENSTTRG00000012493) #20	SP2 (ENSTTRG00000012483) #21	SP6 (ENSTTRG00000012481) #22	SCRN2 (ENSTTRG00000012472) #23	LRRC46 (ENSTTRG00000012463) #24	MRPL10 (ENSTTRG00000012452) #25	OSBPL7 (ENSTTRG00000012411) #26
Sperm whale	MODERN SPECIES	389																SP6 (ENSPCTG00005015038) #22	LRRC46 (ENSPCTG00005014931) #24	SCRN2 (ENSPCTG00005014718) #23	OSBPL7 (ENSPCTG00005014620) #26
Blue whale	MODERN SPECIES	12	HOXB6 (ENSBMSG00010017746) #7	HOXB5 (ENSBMSG00010017772) #8	HOXB4 (ENSBMSG00010017814) #9	HOXB3 (ENSBMSG00010017838) #10	HOXB2 (ENSBMSG00010017860) #11	HOXB1 (ENSBMSG00010017892) #12	SKAP1 (ENSBMSG00010017921) #14	SNX11 (ENSBMSG00010018006) #15	CBX1 (ENSBMSG00010018099) #16	NFE2L1 (ENSBMSG00010018163) #17	COPZ2 (ENSBMSG00010018306) #18	CDK5RAP3 (ENSBMSG00010018481) #19	PRR15L (ENSBMSG00010018513)	PNPO (ENSBMSG00010018544) #20	SP2 (ENSBMSG00010018607) #21	SP6 (ENSBMSG00010018628) #22	ENSBMSG00010018650	ENSBMSG00010018673	ENSBMSG00010018688	ENSBMSG00010018708	ENSBMSG00010018759	ENSBMSG00010018791	CA10 (ENSBMSG00010018845)	ENSBMSG00010018906	KIF2B (ENSBMSG00010018945)	ENSBMSG00010019021	COX11 (ENSBMSG00010019249)	STXBP4 (ENSBMSG00010019312)	ENSBMSG00010019451	ENSBMSG00010019467	MMD (ENSBMSG00010019519)
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00950000185410	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00940000154688.b.j	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Goat	MODERN SPECIES	10	HOXB4 (ENSCHIG00000025323) #9	HOXB3 (ENSCHIG00000013978) #10	HOXB2 (ENSCHIG00000025836) #11	HOXB1 (ENSCHIG00000017872) #12	ENSCHIG00000010180	ENSCHIG00000015920 #14	ENSCHIG00000026878 #14	SNX11 (ENSCHIG00000017547) #15	CBX1 (ENSCHIG00000010985) #16	NFE2L1 (ENSCHIG00000015427) #17	COPZ2 (ENSCHIG00000026544) #18	CDK5RAP3 (ENSCHIG00000025420) #19	PRR15L (ENSCHIG00000008261)	PNPO (ENSCHIG00000004606) #20	SP2 (ENSCHIG00000018648) #21	SP6 (ENSCHIG00000009897) #22	SCRN2 (ENSCHIG00000026802) #23	LRRC46 (ENSCHIG00000015497) #24	MRPL10 (ENSCHIG00000027033) #25	OSBPL7 (ENSCHIG00000023060) #26	TBX21 (ENSCHIG00000021993) #27	TBKBP1 (ENSCHIG00000016860) #28	KPNB1 (ENSCHIG00000014896) #29	NPEPPS (ENSCHIG00000022782) #30	MRPL45 (ENSCHIG00000014110) #31	GPR179 (ENSCHIG00000026098) #32	SOCS7 (ENSCHIG00000012449) #33	ARHGAP23 (ENSCHIG00000023996) #34	SRCIN1 (ENSCHIG00000022297) #35	ENSCHIG00000019374	EPOP (ENSCHIG00000008501)
Rambouillet Sheep	MODERN SPECIES	2	HOXB6 (ENSOARG00020022021) #7	HOXB5 (ENSOARG00020022004) #8	HOXB4 (ENSOARG00020021954) #9	HOXB3 (ENSOARG00020021943) #10	HOXB2 (ENSOARG00020021907) #11	HOXB1 (ENSOARG00020021886) #12	SKAP1 (ENSOARG00020021817) #14	SNX11 (ENSOARG00020021783) #15	CBX1 (ENSOARG00020021741) #16	NFE2L1 (ENSOARG00020021460) #17	COPZ2 (ENSOARG00020021377) #18	CDK5RAP3 (ENSOARG00020021339) #19	PRR15L (ENSOARG00020021319)	PNPO (ENSOARG00020021017) #20	SP2 (ENSOARG00020020972) #21	SP6 (ENSOARG00020020944) #22	SCRN2 (ENSOARG00020020770) #23	LRRC46 (ENSOARG00020020663) #24	MRPL10 (ENSOARG00020020614) #25	OSBPL7 (ENSOARG00020020494) #26	TBX21 (ENSOARG00020020433) #27	TBKBP1 (ENSOARG00020020372) #28	KPNB1 (ENSOARG00020020287) #29	NPEPPS (ENSOARG00020020009) #30	MRPL45 (ENSOARG00020019879) #31	GPR179 (ENSOARG00020019685) #32	SOCS7 (ENSOARG00020019553) #33	ARHGAP23 (ENSOARG00020019239) #34	SRCIN1 (ENSOARG00020018349) #35	ENSOARG00020018303	ENSOARG00020018283
Bovinae	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00960000190232	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35
Bos	ANCESTRAL SPECIES	1	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.i #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590.e.b #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00960000190232	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.i #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590.e.b #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00960000190232	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Cow	MODERN SPECIES	10	HOXB6 (ENSBTAG00000050006) #7	HOXB5 (ENSBTAG00000045835) #8	HOXB4 (ENSBTAG00000039599) #9	HOXB3 (ENSBTAG00000021427) #10	HOXB2 (ENSBTAG00000009979) #11	HOXB1 (ENSBTAG00000007603) #12	SKAP1 (ENSBTAG00000000641) #14	SNX11 (ENSBTAG00000020321) #15	CBX1 (ENSBTAG00000002949) #16	NFE2L1 (ENSBTAG00000013653) #17	COPZ2 (ENSBTAG00000039954) #18	CDK5RAP3 (ENSBTAG00000014202) #19	PRR15L (ENSBTAG00000012249)	PNPO (ENSBTAG00000012259) #20	SP2 (ENSBTAG00000013740) #21	SP6 (ENSBTAG00000001825) #22	SCRN2 (ENSBTAG00000001828) #23	LRRC46 (ENSBTAG00000001830) #24	MRPL10 (ENSBTAG00000001832) #25	OSBPL7 (ENSBTAG00000013523) #26	TBX21 (ENSBTAG00000014199) #27	TBKBP1 (ENSBTAG00000011280) #28	KPNB1 (ENSBTAG00000006586) #29	NPEPPS (ENSBTAG00000011435) #30	MRPL45 (ENSBTAG00000025001) #31	ENSBTAG00000049522	GPR179 (ENSBTAG00000001804) #32	SOCS7 (ENSBTAG00000008535) #33	ARHGAP23 (ENSBTAG00000016911) #34	SRCIN1 (ENSBTAG00000013469) #35	ENSBTAG00000053767 #36
Hybrid Bos Indicus	MODERN SPECIES	10	HOXB5 (ENSBIXG00005029559) #8	HOXB4 (ENSBIXG00005029577) #9	HOXB3 (ENSBIXG00005029591) #10	HOXB2 (ENSBIXG00005029607) #11	HOXB1 (ENSBIXG00005029618) #12	ENSBIXG00005029636	SKAP1 (ENSBIXG00005029657) #14	SNX11 (ENSBIXG00005029679) #15	CBX1 (ENSBIXG00005029691) #16	NFE2L1 (ENSBIXG00005029748) #17	COPZ2 (ENSBIXG00005029862) #18	CDK5RAP3 (ENSBIXG00005029886) #19	PRR15L (ENSBIXG00005029905)	PNPO (ENSBIXG00005029918) #20	ENSBIXG00005029934 #21	SP6 (ENSBIXG00005029948) #22	SCRN2 (ENSBIXG00005029976) #23	LRRC46 (ENSBIXG00005030008) #24	MRPL10 (ENSBIXG00005030023) #25	OSBPL7 (ENSBIXG00005030039) #26	TBX21 (ENSBIXG00005030084) #27	TBKBP1 (ENSBIXG00005030097) #28	KPNB1 (ENSBIXG00005030131) #29	NPEPPS (ENSBIXG00005030159) #30	MRPL45 (ENSBIXG00005030219) #31	ENSBIXG00005030228	GPR179 (ENSBIXG00005030235) #32	SOCS7 (ENSBIXG00005030269) #33	ARHGAP23 (ENSBIXG00005030331) #34	SRCIN1 (ENSBIXG00005030456) #35	EPOP (ENSBIXG00005030515)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b.i #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590.e.b #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00960000190232	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35
Wild yak	MODERN SPECIES	953																SP6 (ENSBMUG00000000772) #22	SCRN2 (ENSBMUG00000000797) #23	LRRC46 (ENSBMUG00000000816) #24	MRPL10 (ENSBMUG00000000829) #25	OSBPL7 (ENSBMUG00000000874) #26	TBX21 (ENSBMUG00000000904) #27	TBKBP1 (ENSBMUG00000000913) #28	KPNB1 (ENSBMUG00000000951) #29	NPEPPS (ENSBMUG00000001034) #30	MRPL45 (ENSBMUG00000001074) #31	ENSBMUG00000001086	GPR179 (ENSBMUG00000001100) #32	SOCS7 (ENSBMUG00000001131) #33	ARHGAP23 (ENSBMUG00000001176) #34	SRCIN1 (ENSBMUG00000001263) #35	ENSBMUG00000001292 #36
Domestic yak	MODERN SPECIES	10	HOXB6 (ENSBGRG00000021579) #7	HOXB5 (ENSBGRG00000021555) #8	HOXB4 (ENSBGRG00000021501) #9	HOXB3 (ENSBGRG00000021464) #10	HOXB2 (ENSBGRG00000021425) #11	HOXB1 (ENSBGRG00000021404) #12	SKAP1 (ENSBGRG00000021202) #14	SNX11 (ENSBGRG00000021141) #15	CBX1 (ENSBGRG00000021062) #16	NFE2L1 (ENSBGRG00000020783) #17	COPZ2 (ENSBGRG00000020574) #18	CDK5RAP3 (ENSBGRG00000020283) #19	ENSBGRG00000020194	PNPO (ENSBGRG00000019898) #20	ENSBGRG00000019774 #21	SP6 (ENSBGRG00000019744) #22	SCRN2 (ENSBGRG00000019672) #23	LRRC46 (ENSBGRG00000019490) #24	MRPL10 (ENSBGRG00000019422) #25	OSBPL7 (ENSBGRG00000019260) #26	TBX21 (ENSBGRG00000019171) #27	TBKBP1 (ENSBGRG00000019067) #28	KPNB1 (ENSBGRG00000018571) #29	NPEPPS (ENSBGRG00000018276) #30	ENSBGRG00000018222	MRPL45 (ENSBGRG00000017975) #31	ENSBGRG00000017816 #32	SOCS7 (ENSBGRG00000017476) #33	ARHGAP23 (ENSBGRG00000017050) #34	ENSBGRG00000016987	SRCIN1 (ENSBGRG00000015645) #35
American bison	MODERN SPECIES	3101	HOXB6 (ENSBBBG00000021567) #7	HOXB5 (ENSBBBG00000021577) #8	HOXB4 (ENSBBBG00000021585) #9	HOXB3 (ENSBBBG00000005740) #10	HOXB2 (ENSBBBG00000021598) #11	HOXB1 (ENSBBBG00000021601) #12	SKAP1 (ENSBBBG00000021634) #14	SNX11 (ENSBBBG00000021652) #15	ENSBBBG00000021675 ##16	NFE2L1 (ENSBBBG00000021740) #17	COPZ2 (ENSBBBG00000021782) #18	CDK5RAP3 (ENSBBBG00000021808) #19	PRR15L (ENSBBBG00000021809)	PNPO (ENSBBBG00000021862) #20	SP2 (ENSBBBG00000021914) #21	SP6 (ENSBBBG00000021924) #22	SCRN2 (ENSBBBG00000021958) #23	LRRC46 (ENSBBBG00000021972) #24	MRPL10 (ENSBBBG00000021983) #25	OSBPL7 (ENSBBBG00000022056) #26	TBX21 (ENSBBBG00000005826) #27	ENSBBBG00000022076 #28	KPNB1 (ENSBBBG00000022131) #29	NPEPPS (ENSBBBG00000022236) #30	ENSBBBG00000022252	MRPL45 (ENSBBBG00000022294) #31	ENSBBBG00000005882 #32	SOCS7 (ENSBBBG00000005889) #33	ENSBBBG00000005896 #34	ENSBBBG00000022356 #36	SRCIN1 (ENSBBBG00000022427) #35
Siberian musk deer	MODERN SPECIES	1210	HOXB4 (ENSMMSG00000024528) #9	ENSMMSG00000024530	HOXB3 (ENSMMSG00000024531) #10	HOXB2 (ENSMMSG00000024532) #11	HOXB1 (ENSMMSG00000024533) #12	ENSMMSG00000024535	SKAP1 (ENSMMSG00000024536) #14	SNX11 (ENSMMSG00000024538) #15	CBX1 (ENSMMSG00000024540) #16	NFE2L1 (ENSMMSG00000024541) #17	COPZ2 (ENSMMSG00000024546) #18	CDK5RAP3 (ENSMMSG00000024548) #19	PRR15L (ENSMMSG00000024549)	PNPO (ENSMMSG00000024550) #20	SP2 (ENSMMSG00000024551) #21	SP6 (ENSMMSG00000018224) #22	SCRN2 (ENSMMSG00000018238) #23	LRRC46 (ENSMMSG00000018351) #24	MRPL10 (ENSMMSG00000018396) #25	OSBPL7 (ENSMMSG00000018422) #26	ENSMMSG00000018451	TBX21 (ENSMMSG00000018475) #27	TBKBP1 (ENSMMSG00000018512) #28	KPNB1 (ENSMMSG00000018546) #29	NPEPPS (ENSMMSG00000018632) #30	ENSMMSG00000018805	MRPL45 (ENSMMSG00000018849) #31	GPR179 (ENSMMSG00000018906) #32	SOCS7 (ENSMMSG00000019056) #33	ARHGAP23 (ENSMMSG00000019156) #34	SRCIN1 (ENSMMSG00000019355) #35
Yarkand deer	MODERN SPECIES	28	HOXB4 (ENSCHYG00000004668) #9	HOXB3 (ENSCHYG00000004670) #10	HOXB2 (ENSCHYG00000004674) #11	HOXB1 (ENSCHYG00000004684) #12	SKAP1 (ENSCHYG00000004692) #14	ENSCHYG00000004720	SNX11 (ENSCHYG00000004737) #15	CBX1 (ENSCHYG00000004750) #16	NFE2L1 (ENSCHYG00000004781) #17	COPZ2 (ENSCHYG00000004829) #18	ENSCHYG00000004851	CDK5RAP3 (ENSCHYG00000000101) #19	PRR15L (ENSCHYG00000000125)	PNPO (ENSCHYG00000000157) #20	SP2 (ENSCHYG00000000198) #21	SP6 (ENSCHYG00000000221) #22	SCRN2 (ENSCHYG00000000227) #23	LRRC46 (ENSCHYG00000000251) #24	MRPL10 (ENSCHYG00000000265) #25	OSBPL7 (ENSCHYG00000000286) #26	TBX21 (ENSCHYG00000000318) #27	TBKBP1 (ENSCHYG00000000333) #28	KPNB1 (ENSCHYG00000000360) #29	ENSCHYG00000000411	NPEPPS (ENSCHYG00000000456) #30	MRPL45 (ENSCHYG00000000557) #31	GPR179 (ENSCHYG00000000586) #32	SOCS7 (ENSCHYG00000000633) #33	ARHGAP23 (ENSCHYG00000000727) #34	ENSCHYG00000000749	SRCIN1 (ENSCHYG00000000846) #35
Camelidae	ANCESTRAL SPECIES	60	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.a.a ##16	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Arabian camel	MODERN SPECIES	7	HOXB6 (ENSCDRG00005018029) #7	HOXB5 (ENSCDRG00005018055) #8	HOXB4 (ENSCDRG00005018079) #9	HOXB3 (ENSCDRG00005018104) #10	HOXB2 (ENSCDRG00005018121) #11	HOXB1 (ENSCDRG00005018147) #12	SKAP1 (ENSCDRG00005018166) #14	SNX11 (ENSCDRG00005018232) #15	CBX1 (ENSCDRG00005018330) ##16	NFE2L1 (ENSCDRG00005018357) #17	ENSCDRG00005018515	COPZ2 (ENSCDRG00005018538) #18	CDK5RAP3 (ENSCDRG00005018564) #19	PRR15L (ENSCDRG00005018636)	SP2 (ENSCDRG00005018756) #21	SP6 (ENSCDRG00005018791) #22	SCRN2 (ENSCDRG00005018805) #23	LRRC46 (ENSCDRG00005018865) #24	MRPL10 (ENSCDRG00005018906) #25	OSBPL7 (ENSCDRG00005018943) #26	TBX21 (ENSCDRG00005018980) #27	TBKBP1 (ENSCDRG00005018994) #28	KPNB1 (ENSCDRG00005019017) #29	NPEPPS (ENSCDRG00005019119) #30	MRPL45 (ENSCDRG00005019287) #31	GPR179 (ENSCDRG00005019342) #32	SOCS7 (ENSCDRG00005019385) #33	ENSCDRG00005019433 #34	SRCIN1 (ENSCDRG00005019469) #35	ENSCDRG00005019591 #36	ENSCDRG00005019601
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Dog	MODERN SPECIES	37	HOXB5 (ENSCAFG00845009832) #8	HOXB4 (ENSCAFG00845017264) #9	HOXB3 (ENSCAFG00845017188) #10	HOXB2 (ENSCAFG00845017142) #11	HOXB1 (ENSCAFG00845017096) #12	SKAP1 (ENSCAFG00845016959) #14	SNX11 (ENSCAFG00845016720) #15	CBX1 (ENSCAFG00845016596) #16	NFE2L1 (ENSCAFG00845016388) #17	COPZ2 (ENSCAFG00845016156) #18	CDK5RAP3 (ENSCAFG00845016051) #19	ENSCAFG00845016000	PRR15L (ENSCAFG00845015978)	PNPO (ENSCAFG00845015876) #20	SP2 (ENSCAFG00845015786) #21	SP6 (ENSCAFG00845015746) #22	SCRN2 (ENSCAFG00845015686) #23	LRRC46 (ENSCAFG00845015603) #24	MRPL10 (ENSCAFG00845015539) #25	OSBPL7 (ENSCAFG00845015415) #26	TBX21 (ENSCAFG00845015330) #27	TBKBP1 (ENSCAFG00845015281) #28	KPNB1 (ENSCAFG00845015226) #29	NPEPPS (ENSCAFG00845014931) #30	ENSCAFG00845014840 #31	GPR179 (ENSCAFG00845014777) #32	SOCS7 (ENSCAFG00845014686) #33	ARHGAP23 (ENSCAFG00845014513) #34	SRCIN1 (ENSCAFG00845014295) #35	EPOP (ENSCAFG00845014204)	MLLT6 (ENSCAFG00845014142) #37
Dingo	MODERN SPECIES	150	HOXB6 (ENSCAFG00020023302) #7	HOXB5 (ENSCAFG00020023301) #8	HOXB4 (ENSCAFG00020023297) #9	HOXB3 (ENSCAFG00020023294) #10	HOXB2 (ENSCAFG00020023293) #11	HOXB1 (ENSCAFG00020023290) #12	SKAP1 (ENSCAFG00020023287) #14	SNX11 (ENSCAFG00020023282) #15	CBX1 (ENSCAFG00020023275) #16	NFE2L1 (ENSCAFG00020023270) #17	COPZ2 (ENSCAFG00020023263) #18	CDK5RAP3 (ENSCAFG00020023258) #19	PRR15L (ENSCAFG00020023256)	PNPO (ENSCAFG00020023249) #20	SP2 (ENSCAFG00020023246) #21	SP6 (ENSCAFG00020023243) #22	SCRN2 (ENSCAFG00020023238) #23	LRRC46 (ENSCAFG00020023236) #24	MRPL10 (ENSCAFG00020023232) #25	OSBPL7 (ENSCAFG00020023225) #26	TBX21 (ENSCAFG00020023221) #27	TBKBP1 (ENSCAFG00020023210) #28	KPNB1 (ENSCAFG00020023205) #29	NPEPPS (ENSCAFG00020023203) #30	ENSCAFG00020023199	MRPL45 (ENSCAFG00020023186) #31	GPR179 (ENSCAFG00020023180) #32	SOCS7 (ENSCAFG00020023179) #33	ARHGAP23 (ENSCAFG00020023111) #34	ENSCAFG00020023090 #35	ENSCAFG00020023078 #35
Red fox	MODERN SPECIES	20	HOXB6 (ENSVVUG00000003359) #7	HOXB5 (ENSVVUG00000003354) #8	ENSVVUG00000003340 #9	HOXB3 (ENSVVUG00000003329) #10	HOXB2 (ENSVVUG00000003328) #11	HOXB1 (ENSVVUG00000003325) #12	SKAP1 (ENSVVUG00000003297) #14	SNX11 (ENSVVUG00000003276) #15	ENSVVUG00000003272 #16	NFE2L1 (ENSVVUG00000003262) #17	COPZ2 (ENSVVUG00000003249) #18	CDK5RAP3 (ENSVVUG00000003227) #19	PRR15L (ENSVVUG00000003218)	PNPO (ENSVVUG00000003178) #20	SP2 (ENSVVUG00000003171) #21	SP6 (ENSVVUG00000003167) #22	SCRN2 (ENSVVUG00000003154) #23	LRRC46 (ENSVVUG00000003146) #24	MRPL10 (ENSVVUG00000003141) #25	ENSVVUG00000003127 #26	TBX21 (ENSVVUG00000003106) #27	ENSVVUG00000003100 #28	KPNB1 (ENSVVUG00000003085) #29	NPEPPS (ENSVVUG00000003061) #30	MRPL45 (ENSVVUG00000003030) #31	GPR179 (ENSVVUG00000002981) #32	SOCS7 (ENSVVUG00000002941) #33	ARHGAP23 (ENSVVUG00000002610) #34	SRCIN1 (ENSVVUG00000002377) #35	EPOP (ENSVVUG00000002338)	MLLT6 (ENSVVUG00000002319) #37
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
Ursidae	ANCESTRAL SPECIES	18	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00860000135964 #36	ENSGT00940000153451.a.a.a
Ursus	ANCESTRAL SPECIES	67	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00390000005809.c.b	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34
American black bear	MODERN SPECIES	1414							SNX11 (ENSUAMG00000017102) #15	CBX1 (ENSUAMG00000017105) #16	NFE2L1 (ENSUAMG00000017111) #17	ENSUAMG00000017113	COPZ2 (ENSUAMG00000017115) #18	CDK5RAP3 (ENSUAMG00000017117) #19	PRR15L (ENSUAMG00000017119)	PNPO (ENSUAMG00000017122) #20	SP2 (ENSUAMG00000017127) #21	SP6 (ENSUAMG00000017132) #22	SCRN2 (ENSUAMG00000017135) #23	LRRC46 (ENSUAMG00000017138) #24	MRPL10 (ENSUAMG00000017142) #25
Giant Panda	MODERN SPECIES	2220																ENSAMEG00000019912 #22
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00860000135964 #36	ENSGT00940000157961.C #35
American mink	MODERN SPECIES	92	HOXB4 (ENSNVIG00000006040) #9	HOXB3 (ENSNVIG00000006032) #10	HOXB2 (ENSNVIG00000006024) #11	HOXB1 (ENSNVIG00000006017) #12	ENSNVIG00000006009	SKAP1 (ENSNVIG00000005974) #14	SNX11 (ENSNVIG00000005959) #15	CBX1 (ENSNVIG00000005946) #16	NFE2L1 (ENSNVIG00000005857) #17	ENSNVIG00000005842	COPZ2 (ENSNVIG00000005837) #18	CDK5RAP3 (ENSNVIG00000005742) #19	PR15L (ENSNVIG00000005731)	PNPO (ENSNVIG00000005692) #20	SP2 (ENSNVIG00000005673) #21	SP6 (ENSNVIG00000005667) #22	SCRN2 (ENSNVIG00000005641) #23	LRRC46 (ENSNVIG00000005619) #24	RM10 (ENSNVIG00000005608) #25	OSBPL7 (ENSNVIG00000005460) #26	TBX21 (ENSNVIG00000005442) #27	ENSNVIG00000005426 #28	KPNB1 (ENSNVIG00000005359) #29	NPEPPS (ENSNVIG00000005313) #30	MRPL45 (ENSNVIG00000005287) #31	GPR179 (ENSNVIG00000005217) #32	SOCS7 (ENSNVIG00000005194) #33	ARHGAP23 (ENSNVIG00000005156) #34	ENSNVIG00000005143	ENSNVIG00000005132 #36	SRCIN1 (ENSNVIG00000004933) #35
Ferret	MODERN SPECIES	270	HOXB7 (ENSMPUG00000015328)	HOXB6 (ENSMPUG00000015322) #7	HOXB5 (ENSMPUG00000015316) #8	HOXB4 (ENSMPUG00000015310) #9	HOXB2 (ENSMPUG00000015309) #11	HOXB1 (ENSMPUG00000015307) #12	SKAP1 (ENSMPUG00000015305) #14	SNX11 (ENSMPUG00000015303) #15	CBX1 (ENSMPUG00000015302) ##16	NFE2L1 (ENSMPUG00000015301) #17	COPZ2 (ENSMPUG00000015292) #18	CDK5RAP3 (ENSMPUG00000015291) #19	PRR15L (ENSMPUG00000020087)	PNPO (ENSMPUG00000015290) #20	SP2 (ENSMPUG00000015289) #21	SP6 (ENSMPUG00000020086) #22	SCRN2 (ENSMPUG00000015288) #23	LRRC46 (ENSMPUG00000015287) #24	MRPL10 (ENSMPUG00000015278) #25	OSBPL7 (ENSMPUG00000015276) #26	ENSMPUG00000015275	ENSMPUG00000015273	TBX21 (ENSMPUG00000015272) #27	TBKBP1 (ENSMPUG00000015271) #28	KPNB1 (ENSMPUG00000015220) #29	NPEPPS (ENSMPUG00000015219) #30	MRPL45 (ENSMPUG00000015218) #31	GPR179 (ENSMPUG00000015211) #32	SOCS7 (ENSMPUG00000015192) #33	ARHGAP23 (ENSMPUG00000015145) #34	SRCIN1 (ENSMPUG00000015140) #35
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000013771.p	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.i #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00860000135964 #36
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000013771.p	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00950000185410	ENSGT00390000004405.b #18	ENSGT00940000154534.a	ENSGT00390000000713 #19	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.i.a.a #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000013771.p	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00940000154534.a	ENSGT00390000000713 #19	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679.i.a.a #31	ENSGT00390000012679.i.b #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00930000153020	ENSGT00940000157961.C #35
leopard	MODERN SPECIES	67	HOXB5 (ENSPPRG00000000333) #8	HOXB4 (ENSPPRG00000000220) #9	HOXB3 (ENSPPRG00000022415) #10	HOXB2 (ENSPPRG00000020926) #11	HOXB1 (ENSPPRG00000017656) #12	ENSPPRG00000017115	ENSPPRG00000016613	SKAP1 (ENSPPRG00000015336) #14	SNX11 (ENSPPRG00000012061) #15	CBX1 (ENSPPRG00000009475) #16	NFE2L1 (ENSPPRG00000009101) #17	COPZ2 (ENSPPRG00000006801) #18	CDK5RAP3 (ENSPPRG00000006376) #19	PNPO (ENSPPRG00000005037) #20	SP2 (ENSPPRG00000003332) #21	SP6 (ENSPPRG00000016089) #22	SCRN2 (ENSPPRG00000002730) #23	LRRC46 (ENSPPRG00000001915) #24	MRPL10 (ENSPPRG00000001188) #25	ENSPPRG00000001011 #26	TBX21 (ENSPPRG00000000491) #27	TBKBP1 (ENSPPRG00000000101) #28	KPNB1 (ENSPPRG00000022879) #29	NPEPPS (ENSPPRG00000020677) #30	ENSPPRG00000014693 #31	GPR179 (ENSPPRG00000013909) #32	SOCS7 (ENSPPRG00000012918) #33	ARHGAP23 (ENSPPRG00000012371) #34	ENSPPRG00000011407	SRCIN1 (ENSPPRG00000011073) #35	ENSPPRG00000015449
lion	MODERN SPECIES	14	HOXB6 (ENSPLOG00000021669) #7	HOXB5 (ENSPLOG00000021683) #8	HOXB4 (ENSPLOG00000021697) #9	HOXB3 (ENSPLOG00000021711) #10	HOXB2 (ENSPLOG00000021733) #11	HOXB1 (ENSPLOG00000021742) #12	ENSPLOG00000021761	SKAP1 (ENSPLOG00000021790) #14	SNX11 (ENSPLOG00000021872) #15	CBX1 (ENSPLOG00000021907) #16	NFE2L1 (ENSPLOG00000021931) #17	COPZ2 (ENSPLOG00000021972) #18	CDK5RAP3 (ENSPLOG00000022033) #19	PRR15L (ENSPLOG00000022093)	SP2 (ENSPLOG00000022101) #21	SP6 (ENSPLOG00000022115) #22	SCRN2 (ENSPLOG00000022130) #23	LRRC46 (ENSPLOG00000005433) #24	MRPL10 (ENSPLOG00000005459) #25	OSBPL7 (ENSPLOG00000005563) #26	TBX21 (ENSPLOG00000005640) #27	TBKBP1 (ENSPLOG00000005658) #28	KPNB1 (ENSPLOG00000005771) #29	NPEPPS (ENSPLOG00000005888) #30	MRPL45 (ENSPLOG00000006010) #31	GPR179 (ENSPLOG00000006047) #32	SOCS7 (ENSPLOG00000006096) #33	ARHGAP23 (ENSPLOG00000006163) #34	SRCIN1 (ENSPLOG00000006464) #35	EPOP (ENSPLOG00000006763)	MLLT6 (ENSPLOG00000006793) #37
Cat	MODERN SPECIES	245	HOXB5 (ENSFCAG00000039068) #8	HOXB4 (ENSFCAG00000051422) #9	HOXB3 (ENSFCAG00000006408) #10	HOXB2 (ENSFCAG00000045039) #11	HOXB1 (ENSFCAG00000028151) #12	ENSFCAG00000034133	SKAP1 (ENSFCAG00000004784) #14	SNX11 (ENSFCAG00000009371) #15	CBX1 (ENSFCAG00000006056) ##16	NFE2L1 (ENSFCAG00000009369) #17	COPZ2 (ENSFCAG00000034233) #18	CDK5RAP3 (ENSFCAG00000009367) #19	PRR15L (ENSFCAG00000009366)	PNPO (ENSFCAG00000001300) #20	SP2 (ENSFCAG00000009365) #21	SP6 (ENSFCAG00000009363) #22	SCRN2 (ENSFCAG00000009362) #23	LRRC46 (ENSFCAG00000045119) #24	MRPL10 (ENSFCAG00000009360) #25	OSBPL7 (ENSFCAG00000009359) #26	TBX21 (ENSFCAG00000010607) #27	TBKBP1 (ENSFCAG00000010605) #28	KPNB1 (ENSFCAG00000023994) #29	NPEPPS (ENSFCAG00000027844) #30	MRPL45 (ENSFCAG00000005808) #31	GPR179 (ENSFCAG00000005812) #32	SOCS7 (ENSFCAG00000005815) #33	ARHGAP23 (ENSFCAG00000005816) #34	SRCIN1 (ENSFCAG00000005817) #35	ENSFCAG00000048827 #36	EPOP (ENSFCAG00000036017)
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Equus	ANCESTRAL SPECIES		ENSGT00940000161108 #7	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Donkey	MODERN SPECIES	4	HOXB7 (ENSEASG00005000556)	HOXB5 (ENSEASG00005000563) #8	HOXB6 (ENSEASG00005000560) #7	HOXB3 (ENSEASG00005000581) #10	HOXB2 (ENSEASG00005000585) #11	HOXB1 (ENSEASG00005000594) #12	SKAP1 (ENSEASG00005000601) #14	SNX11 (ENSEASG00005000605) #15	CBX1 (ENSEASG00005000607) #16	NFE2L1 (ENSEASG00005000634) #17	COPZ2 (ENSEASG00005000641) #18	CDK5RAP3 (ENSEASG00005000658) #19	PRR15L (ENSEASG00005000660)	PNPO (ENSEASG00005028794) #20	SP2 (ENSEASG00005000667) #21	SP6 (ENSEASG00005036407) #22	SCRN2 (ENSEASG00005000671) #23	LRRC46 (ENSEASG00005000676) #24	MRPL10 (ENSEASG00005027403) #25	OSBPL7 (ENSEASG00005000733) #26	TBX21 (ENSEASG00005000739) #27	TBKBP1 (ENSEASG00005000756) #28	KPNB1 (ENSEASG00005000805) #29	ENSEASG00005000896 #30	ENSEASG00005001461 #31	ENSEASG00005001474 #32	SOCS7 (ENSEASG00005001492) #33	ARHGAP23 (ENSEASG00005001497) #34	SRCIN1 (ENSEASG00005001556) #35	EPOP (ENSEASG00005029689)	MLLT6 (ENSEASG00005001776) #37
Horse	MODERN SPECIES	2	HOXB8 (ENSECAG00000034473)	HOXB5 (ENSECAG00000012439) #8	HOXB4 (ENSECAG00000028576) #9	HOXB3 (ENSECAG00000002707) #10	HOXB2 (ENSECAG00000012423) #11	HOXB1 (ENSECAG00000011628) #12	SKAP1 (ENSECAG00000010544) #14	SNX11 (ENSECAG00000008117) #15	CBX1 (ENSECAG00000008048) #16	NFE2L1 (ENSECAG00000007777) #17	COPZ2 (ENSECAG00000024471) #18	CDK5RAP3 (ENSECAG00000018688) #19	PRR15L (ENSECAG00000002658)	PNPO (ENSECAG00000014995) #20	SP2 (ENSECAG00000012859) #21	SP6 (ENSECAG00000012853) #22	SCRN2 (ENSECAG00000009826) #23	LRRC46 (ENSECAG00000007543) #24	OSBPL7 (ENSECAG00000019067) #26	TBX21 (ENSECAG00000018160) #27	TBKBP1 (ENSECAG00000016107) #28	KPNB1 (ENSECAG00000014560) #29	NPEPPS (ENSECAG00000007392) #30	MRPL45 (ENSECAG00000000590) #31	GPR179 (ENSECAG00000021843) #32	SOCS7 (ENSECAG00000021699) #33	ARHGAP23 (ENSECAG00000031942) #34	SRCIN1 (ENSECAG00000014219) #35	EPOP (ENSECAG00000036519)	MLLT6 (ENSECAG00000012082) #37	CISD3 (ENSECAG00000011982)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000158354 #8	ENSGT00940000162072 #9	ENSGT00980000199681	ENSGT00940000159774 #10	ENSGT00940000155029.c.b #11	ENSGT00940000159503 #12	ENSGT00390000017856.b #14	ENSGT00940000160113 #15	ENSGT00940000154152.d.b #16	ENSGT00950000182892.a.b.a.a #17	ENSGT00390000004405.b #18	ENSGT00390000000713 #19	ENSGT00940000154534.a	ENSGT00390000011219 #20	ENSGT00940000159590 #21	ENSGT00940000161498 #22	ENSGT00390000013474.b.a #23	ENSGT00940000161315 #24	ENSGT00390000000603 #25	ENSGT00940000157439 #26	ENSGT00940000160397 #27	ENSGT00940000153704.B #28	ENSGT00550000074898 #29	ENSGT00940000155246 #30	ENSGT00390000012679 #31	ENSGT00940000160776 #32	ENSGT00940000156314 #33	ENSGT00940000157982.b #34	ENSGT00940000157961.C #35	ENSGT00940000153451.a.a.a	ENSGT00940000158572 #37
Greater horseshoe bat	MODERN SPECIES	13	HOXB5 (ENSRFEG00010021836) #8	HOXB4 (ENSRFEG00010021844) #9	ENSRFEG00010021849	HOXB3 (ENSRFEG00010021853) #10	HOXB2 (ENSRFEG00010021859) #11	HOXB1 (ENSRFEG00010021864) #12	SKAP1 (ENSRFEG00010021866) #14	SNX11 (ENSRFEG00010021879) #15	CBX1 (ENSRFEG00010021893) #16	NFE2L1 (ENSRFEG00010021900) #17	COPZ2 (ENSRFEG00010021918) #18	CDK5RAP3 (ENSRFEG00010021928) #19	PRR15L (ENSRFEG00010021936)	PNPO (ENSRFEG00010021942) #20	SP2 (ENSRFEG00010021950) #21	SP6 (ENSRFEG00010021957) #22	SCRN2 (ENSRFEG00010021961) #23	LRRC46 (ENSRFEG00010008197) #24	MRPL10 (ENSRFEG00010008230) #25	OSBPL7 (ENSRFEG00010008272) #26	TBX21 (ENSRFEG00010008382) #27	TBKBP1 (ENSRFEG00010008412) #28	KPNB1 (ENSRFEG00010008460) #29	NPEPPS (ENSRFEG00010008553) #30	MRPL45 (ENSRFEG00010008623) #31	GPR179 (ENSRFEG00010008688) #32	SOCS7 (ENSRFEG00010008940) #33	ARHGAP23 (ENSRFEG00010009067) #34	SRCIN1 (ENSRFEG00010009277) #35	EPOP (ENSRFEG00010009672)	MLLT6 (ENSRFEG00010009688) #37
Megabat	MODERN SPECIES	2332												COPZ2 (ENSPVAG00000004259) #18	CDK5RAP3 (ENSPVAG00000004258) #19	PNPO (ENSPVAG00000004256) #20	SP2 (ENSPVAG00000004255) #21	SP6 (ENSPVAG00000004254) #22	SCRN2 (ENSPVAG00000004253) #23	LRRC46 (ENSPVAG00000004252) #24	MRPL10 (ENSPVAG00000004251) #25	OSBPL7 (ENSPVAG00000004250) #26