Sarcopterygii	ANCESTRAL SPECIES	2	ENSGT00390000013043	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00950000182810.B.b	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000166449	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000165038	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00950000182932.B #7	ENSGT00390000011904 #10	ENSGT00940000159015 #8	ENSGT00910000148102	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00940000166449	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000165038	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Amniota	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Mammalia	ANCESTRAL SPECIES	1	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Theria	ANCESTRAL SPECIES	6	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Primates	ANCESTRAL SPECIES	10	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Macaca	ANCESTRAL SPECIES	25	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00910000148469 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Pig-tailed macaque	MODERN SPECIES	590	NAT8L (ENSMNEG00000029002) #7	POLN (ENSMNEG00000044077) #8	ENSMNEG00000034392 #9	HAUS3 (ENSMNEG00000031199) #10	MXD4 (ENSMNEG00000036831) #11	ZFYVE28 (ENSMNEG00000039840) #12	CFAP99 (ENSMNEG00000030381) #13	RNF4 (ENSMNEG00000035146) #14	FAM193A (ENSMNEG00000045102) #15	TNIP2 (ENSMNEG00000045051) #16	SH3BP2 (ENSMNEG00000033987) #17	ADD1 (ENSMNEG00000043560) #18	ENSMNEG00000029943 #19	NOP14 (ENSMNEG00000039699) #20	ENSMNEG00000037083 #21	GRK4 (ENSMNEG00000028235) #22	HTT (ENSMNEG00000037615) #23	MSANTD1 (ENSMNEG00000043740) #24	RGS12 (ENSMNEG00000037042) #25	HGFAC (ENSMNEG00000022644) #26	DOK7 (ENSMNEG00000029872) #27	LRPAP1 (ENSMNEG00000030259) #28	ENSMNEG00000041149 #29	ADRA2C (ENSMNEG00000040943) #30	HMX1 (ENSMNEG00000039219) #31	CPZ (ENSMNEG00000031483) #32	GPR78 (ENSMNEG00000045501) #33	TRMT44 (ENSMNEG00000030113) #34	ACOX3 (ENSMNEG00000029626) #35	HTRA3 (ENSMNEG00000037839) #36	ENSMNEG00000042252 #37
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00390000000703.h.h.a	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.a.b.b.b.a.b.a.b	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000059887 #7	POLN (ENSMFAG00000032512) #8	ENSMFAG00000062209	HAUS3 (ENSMFAG00000034116) #10	ENSMFAG00000053887 #11	ZFYVE28 (ENSMFAG00000062429) #12	CFAP99 (ENSMFAG00000034253) #13	RNF4 (ENSMFAG00000050616) #14	FAM193A (ENSMFAG00000045259) #15	TNIP2 (ENSMFAG00000003617) #16	SH3BP2 (ENSMFAG00000040599) #17	ADD1 (ENSMFAG00000040609) #18	ENSMFAG00000057548	ENSMFAG00000056415	MFSD10 (ENSMFAG00000038471)	GRK4 (ENSMFAG00000000327) #22	HTT (ENSMFAG00000036776) #23	MSANTD1 (ENSMFAG00000030979) #24	RGS12 (ENSMFAG00000039419) #25	HGFAC (ENSMFAG00000002414) #26	DOK7 (ENSMFAG00000045592) #27	LRPAP1 (ENSMFAG00000045907) #28	HMX1 (ENSMFAG00000034271) #31	CPZ (ENSMFAG00000045903) #32	GPR78 (ENSMFAG00000010719) #33	ENSMFAG00000052335	TRMT44 (ENSMFAG00000025459) #34	ACOX3 (ENSMFAG00000037622) #35	HTRA3 (ENSMFAG00000033668) #36	ENSMFAG00000036846	ENSMFAG00000064819
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Olive baboon	MODERN SPECIES	13	ENSPANG00000029835	C4orf48 (ENSPANG00000006016)	POLN (ENSPANG00000000640) #8	HAUS3 (ENSPANG00000007327) #10	ENSPANG00000049266	MXD4 (ENSPANG00000024535) #11	ZFYVE28 (ENSPANG00000001128) #12	CFAP99 (ENSPANG00000034047) #13	RNF4 (ENSPANG00000013408) #14	FAM193A (ENSPANG00000006875) #15	TNIP2 (ENSPANG00000019351) #16	SH3BP2 (ENSPANG00000021586) #17	ADD1 (ENSPANG00000018890) #18	ENSPANG00000018032	NOP14 (ENSPANG00000009642) #20	GRK4 (ENSPANG00000015062) #22	HTT (ENSPANG00000020180) #23	MSANTD1 (ENSPANG00000012405) #24	ENSPANG00000041456 #25	ENSPANG00000016251 #25	HGFAC (ENSPANG00000021871) #26	ENSPANG00000018167 #27	LRPAP1 (ENSPANG00000015064) #28	HTRA3 (ENSPANG00000007655) #36	ACOX3 (ENSPANG00000008200) #35	TRMT44 (ENSPANG00000006054) #34	GPR78 (ENSPANG00000010873) #33	CPZ (ENSPANG00000017849) #32	ENSPANG00000042411	ENSPANG00000014105	HMX1 (ENSPANG00000046521) #31
Cercopithecinae_d	ANCESTRAL SPECIES	85	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Sooty mangabey	MODERN SPECIES	649	C4orf48 (ENSCATG00000036109)	NAT8L (ENSCATG00000039077) #7	ENSCATG00000036129 #9	POLN (ENSCATG00000038015) #8	HAUS3 (ENSCATG00000038591) #10	MXD4 (ENSCATG00000037468) #11	ZFYVE28 (ENSCATG00000043569) #12	CFAP99 (ENSCATG00000015552) #13	RNF4 (ENSCATG00000035992) #14	FAM193A (ENSCATG00000042635) #15	ENSCATG00000012185	SH3BP2 (ENSCATG00000032838) #17	ADD1 (ENSCATG00000020512) #18	ENSCATG00000036685 #19	NOP14 (ENSCATG00000032427) #20	GRK4 (ENSCATG00000035371) #22	HTT (ENSCATG00000040455) #23	MSANTD1 (ENSCATG00000035501) #24	RGS12 (ENSCATG00000034123) #25	HGFAC (ENSCATG00000040884) #26	DOK7 (ENSCATG00000036059) #27	LRPAP1 (ENSCATG00000035154) #28	ADRA2C (ENSCATG00000042063) #30	HMX1 (ENSCATG00000032412) #31	CPZ (ENSCATG00000013066) #32	GPR78 (ENSCATG00000043357) #33	TRMT44 (ENSCATG00000035762) #34	ACOX3 (ENSCATG00000031306) #35	HTRA3 (ENSCATG00000037928) #36	SH3TC1 (ENSCATG00000035668)	ABLIM2 (ENSCATG00000030535)
Vervet Monkey	MODERN SPECIES	19	NSD2 (ENSCSAG00000015664)	NELFA (ENSCSAG00000015669)	C4orf48 (ENSCSAG00000015674)	NAT8L (ENSCSAG00000015681) #7	POLN (ENSCSAG00000015716) #8	HAUS3 (ENSCSAG00000015734) #10	MXD4 (ENSCSAG00000015741) #11	ZFYVE28 (ENSCSAG00000015744) #12	CFAP99 (ENSCSAG00000015752) #13	FAM193A (ENSCSAG00000015766) #15	TNIP2 (ENSCSAG00000015771) #16	SH3BP2 (ENSCSAG00000015782) #17	ADD1 (ENSCSAG00000015789) #18	MFSD10 (ENSCSAG00000015797)	NOP14 (ENSCSAG00000015804) #20	GRK4 (ENSCSAG00000015830) #22	HTT (ENSCSAG00000015865) #23	MSANTD1 (ENSCSAG00000015872) #24	RGS12 (ENSCSAG00000015902) #25	HGFAC (ENSCSAG00000015923) #26	DOK7 (ENSCSAG00000015932) #27	ENSCSAG00000019706	LRPAP1 (ENSCSAG00000015939) #28	ENSCSAG00000015942	ADRA2C (ENSCSAG00000019705) #30	HMX1 (ENSCSAG00000015947) #31	CPZ (ENSCSAG00000015954) #32	GPR78 (ENSCSAG00000015965) #33	TRMT44 (ENSCSAG00000015971) #34	HTRA3 (ENSCSAG00000015988) #36	SH3TC1 (ENSCSAG00000015999)
Rhinopithecus	ANCESTRAL SPECIES	135	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT01080000257748.b	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00940000164052.c	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A.c
Golden snub-nosed monkey	MODERN SPECIES	2481	C4orf48 (ENSRROG00000029831)	ENSRROG00000020413 #7	POLN (ENSRROG00000045711) #8	ENSRROG00000031302 #9	HAUS3 (ENSRROG00000033454) #10	MXD4 (ENSRROG00000040089) #11	ZFYVE28 (ENSRROG00000026858) #12	CFAP99 (ENSRROG00000041025) #13	RNF4 (ENSRROG00000038892) #14	FAM193A (ENSRROG00000033008) #15	TNIP2 (ENSRROG00000045312) #16	SH3BP2 (ENSRROG00000022973) #17	ADD1 (ENSRROG00000038685) #18	ENSRROG00000041583 #19	NOP14 (ENSRROG00000045728) #20	GRK4 (ENSRROG00000011824) #22	HTT (ENSRROG00000039794) #23	MSANTD1 (ENSRROG00000035877) #24	RGS12 (ENSRROG00000030055) #25	HGFAC (ENSRROG00000039081) #26	DOK7 (ENSRROG00000035330) #27	LRPAP1 (ENSRROG00000001847) #28	HMX1 (ENSRROG00000045506) #31	CPZ (ENSRROG00000029378) #32	ENSRROG00000004484	GPR78 (ENSRROG00000033737) #33	TRMT44 (ENSRROG00000031428) #34	ACOX3 (ENSRROG00000041201) #35	HTRA3 (ENSRROG00000043722) #36	SH3TC1 (ENSRROG00000041213)
Black snub-nosed monkey	MODERN SPECIES	2399										FAM193A (ENSRBIG00000022539) #15	ENSRBIG00000005854	SH3BP2 (ENSRBIG00000037661) #17	ADD1 (ENSRBIG00000016212) #18	ENSRBIG00000011690 #19	NOP14 (ENSRBIG00000041250) #20	GRK4 (ENSRBIG00000034736) #22	HTT (ENSRBIG00000038494) #23	MSANTD1 (ENSRBIG00000037857) #24	RGS12 (ENSRBIG00000003368) #25	HGFAC (ENSRBIG00000025676) #26	DOK7 (ENSRBIG00000037866) #27	ENSRBIG00000041368 #29	LRPAP1 (ENSRBIG00000037775) #28
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.u #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Hominidae	ANCESTRAL SPECIES	12	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.u #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.u #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000159350.c	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750	ENSGT00390000000483.b	ENSGT00390000014853.c	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00940000161623
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.u #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000159350.c	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750	ENSGT00390000000483.b	ENSGT00390000014853.c	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00940000161623
Pan	ANCESTRAL SPECIES	7	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00650000094590 #9	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.u #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000159350.c	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750	ENSGT00390000000483.b	ENSGT00390000014853.c	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00940000161623
Chimpanzee	MODERN SPECIES	17	C4H4orf48 (ENSPTRG00000031284)	NAT8L (ENSPTRG00000047587) #7	POLN (ENSPTRG00000034296) #8	ENSPTRG00000052565 #9	HAUS3 (ENSPTRG00000015843) #10	MXD4 (ENSPTRG00000015844) #11	ZFYVE28 (ENSPTRG00000015845) #12	CFAP99 (ENSPTRG00000039939) #13	RNF4 (ENSPTRG00000046370) #14	FAM193A (ENSPTRG00000015847) #15	TNIP2 (ENSPTRG00000015848) #16	SH3BP2 (ENSPTRG00000046864) #17	ADD1 (ENSPTRG00000015850) #18	MFSD10 (ENSPTRG00000015851)	NOP14 (ENSPTRG00000015852) #20	GRK4 (ENSPTRG00000015853) #22	HTT (ENSPTRG00000015854) #23	MSANTD1 (ENSPTRG00000015855) #24	RGS12 (ENSPTRG00000015856) #25	HGFAC (ENSPTRG00000015857) #26	DOK7 (ENSPTRG00000015858) #27	LRPAP1 (ENSPTRG00000015860) #28	ADRA2C (ENSPTRG00000034025) #30	ENSPTRG00000048734	ENSPTRG00000047352	ENSPTRG00000043201	OTOP1 (ENSPTRG00000015865)	TMEM128 (ENSPTRG00000015866)	LYAR (ENSPTRG00000015867)	ZBTB49 (ENSPTRG00000015868)	NSG1 (ENSPTRG00000015869)
Bonobo	MODERN SPECIES	17	ENSPPAG00000040365	ENSPPAG00000033617 #7	POLN (ENSPPAG00000042877) #8	ENSPPAG00000026673 #9	HAUS3 (ENSPPAG00000032988) #10	ENSPPAG00000042591 #11	ZFYVE28 (ENSPPAG00000013584) #12	CFAP99 (ENSPPAG00000035753) #13	RNF4 (ENSPPAG00000035112) #14	FAM193A (ENSPPAG00000039176) #15	ENSPPAG00000035246 #16	SH3BP2 (ENSPPAG00000036464) #17	ADD1 (ENSPPAG00000039399) #18	MFSD10 (ENSPPAG00000041607)	NOP14 (ENSPPAG00000037688) #20	GRK4 (ENSPPAG00000030121) #22	HTT (ENSPPAG00000029038) #23	MSANTD1 (ENSPPAG00000037208) #24	RGS12 (ENSPPAG00000034542) #25	HGFAC (ENSPPAG00000019181) #26	DOK7 (ENSPPAG00000032260) #27	LRPAP1 (ENSPPAG00000043861) #28	ENSPPAG00000027549	OTOP1 (ENSPPAG00000030805)	TMEM128 (ENSPPAG00000032192)	LYAR (ENSPPAG00000036565)	ZBTB49 (ENSPPAG00000028054)	NSG1 (ENSPPAG00000029525)	STX18 (ENSPPAG00000033946)	ENSPPAG00000030316	MSX1 (ENSPPAG00000032954)
Human	MODERN SPECIES	16	NELFA (ENSG00000185049)	C4orf48 (ENSG00000243449)	NAT8L (ENSG00000185818) #7	POLN (ENSG00000130997) #8	HAUS3 (ENSG00000214367) #10	MXD4 (ENSG00000123933) #11	ZFYVE28 (ENSG00000159733) #12	CFAP99 (ENSG00000206113) #13	RNF4 (ENSG00000063978) #14	FAM193A (ENSG00000125386) #15	TNIP2 (ENSG00000168884) #16	SH3BP2 (ENSG00000087266) #17	ADD1 (ENSG00000087274) #18	MFSD10 (ENSG00000109736)	NOP14 (ENSG00000087269) #20	GRK4 (ENSG00000125388) #22	HTT (ENSG00000197386) #23	MSANTD1 (ENSG00000188981) #24	RGS12 (ENSG00000159788) #25	HGFAC (ENSG00000109758) #26	DOK7 (ENSG00000175920) #27	LRPAP1 (ENSG00000163956) #28	ADRA2C (ENSG00000184160) #30	OTOP1 (ENSG00000163982)	TMEM128 (ENSG00000132406)	LYAR (ENSG00000145220)	ZBTB49 (ENSG00000168826)	NSG1 (ENSG00000168824)	STX18 (ENSG00000168818)	MSX1 (ENSG00000163132)	CYTL1 (ENSG00000170891)
Gorilla	MODERN SPECIES	17	NELFA (ENSGGOG00000014161)	ENSGGOG00000041239	ENSGGOG00000037682 #7	POLN (ENSGGOG00000006832) #8	ENSGGOG00000015700 #9	HAUS3 (ENSGGOG00000000744) #10	MXD4 (ENSGGOG00000000747) #11	ZFYVE28 (ENSGGOG00000000748) #12	CFAP99 (ENSGGOG00000041964) #13	RNF4 (ENSGGOG00000036446) #14	ENSGGOG00000025865	SH3BP2 (ENSGGOG00000014162) #17	ADD1 (ENSGGOG00000007407) #18	MFSD10 (ENSGGOG00000007420)	NOP14 (ENSGGOG00000011213) #20	GRK4 (ENSGGOG00000011226) #22	HTT (ENSGGOG00000016385) #23	MSANTD1 (ENSGGOG00000016453) #24	RGS12 (ENSGGOG00000003385) #25	HGFAC (ENSGGOG00000011172) #26	ENSGGOG00000003413 #27	ENSGGOG00000039176	ENSGGOG00000043042 #27	LRPAP1 (ENSGGOG00000003417) #28	ENSGGOG00000010546 #30	OTOP1 (ENSGGOG00000022820)	TMEM128 (ENSGGOG00000013003)	LYAR (ENSGGOG00000013006)	ZBTB49 (ENSGGOG00000013012)	NSG1 (ENSGGOG00000011113)	STX18 (ENSGGOG00000011121)
Orangutan	MODERN SPECIES	17	NAT8L (ENSPPYG00000014537) #7	POLN (ENSPPYG00000014538) #8	ENSPPYG00000040447	ENSPPYG00000014539 #10	ENSPPYG00000036280	ENSPPYG00000037498 #11	ZFYVE28 (ENSPPYG00000014542) #12	CFAP99 (ENSPPYG00000040137) #13	RNF4 (ENSPPYG00000025865) #14	FAM193A (ENSPPYG00000014544) #15	TNIP2 (ENSPPYG00000014545) #16	SH3BP2 (ENSPPYG00000014546) #17	ADD1 (ENSPPYG00000014547) #18	ENSPPYG00000014548 #19	NOP14 (ENSPPYG00000014549) #20	GRK4 (ENSPPYG00000014550) #22	HTT (ENSPPYG00000014551) #23	MSANTD1 (ENSPPYG00000014552) #24	RGS12 (ENSPPYG00000014553) #25	HGFAC (ENSPPYG00000029408) #26	DOK7 (ENSPPYG00000014554) #27	LRPAP1 (ENSPPYG00000014556) #28	ADRA2C (ENSPPYG00000036306) #30	HMX1 (ENSPPYG00000015293) #31	CPZ (ENSPPYG00000014560) #32	GPR78 (ENSPPYG00000014561) #33	TRMT44 (ENSPPYG00000038960) #34	ACOX3 (ENSPPYG00000014563) #35	HTRA3 (ENSPPYG00000014564) #36	SH3TC1 (ENSPPYG00000014566)	ABLIM2 (ENSPPYG00000014567)
Gibbon	MODERN SPECIES	12	ENSNLEG00000035664 #7	ENSNLEG00000000145 #10	POLN (ENSNLEG00000000132) #8	ENSNLEG00000036277	ENSNLEG00000000149 #11	ZFYVE28 (ENSNLEG00000000151) #12	ENSNLEG00000000154 #13	ENSNLEG00000034085	ENSNLEG00000031900 #14	FAM193A (ENSNLEG00000000167) #15	ENSNLEG00000000191 #16	SH3BP2 (ENSNLEG00000000199) #17	ADD1 (ENSNLEG00000000201) #18	MFSD10 (ENSNLEG00000000234)	NOP14 (ENSNLEG00000000239) #20	GRK4 (ENSNLEG00000000261) #22	HTT (ENSNLEG00000000273) #23	ENSNLEG00000000286 #24	ENSNLEG00000000287 #25	HGFAC (ENSNLEG00000000301) #26	DOK7 (ENSNLEG00000000308) #27	LRPAP1 (ENSNLEG00000000309) #28	ENSNLEG00000018645 #30	ENSNLEG00000031510 #31	ENSNLEG00000011937 #32	GPR78 (ENSNLEG00000011932) #33	TRMT44 (ENSNLEG00000011922) #34	ACOX3 (ENSNLEG00000011919) #35	HTRA3 (ENSNLEG00000011913) #36	SH3TC1 (ENSNLEG00000011887)	ENSNLEG00000028406
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00390000005342.j	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.w #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422.a #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00950000182895.a.a.a.a.b.k.v.a	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Cebidae	ANCESTRAL SPECIES	4	ENSGT00390000005342.j	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.w #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422.a #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00950000182895.a.a.a.a.b.k.v.a	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Cebidae_a	ANCESTRAL SPECIES	34	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.x #14	ENSGT00390000010318.w #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422.a #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a
Capuchin	MODERN SPECIES	521								CFAP99 (ENSCCAG00000029013) #13	ENSCCAG00000036395 #14	FAM193A (ENSCCAG00000036471) #15	TNIP2 (ENSCCAG00000026551) #16	SH3BP2 (ENSCCAG00000033965) #17	ADD1 (ENSCCAG00000028408) #18	ENSCCAG00000018868 #19	NOP14 (ENSCCAG00000034221) #20	GRK4 (ENSCCAG00000022457) #22	HTT (ENSCCAG00000029611) #23	MSANTD1 (ENSCCAG00000001190) #24	RGS12 (ENSCCAG00000028437) #25	HGFAC (ENSCCAG00000028565) #26	DOK7 (ENSCCAG00000020081) #27	LRPAP1 (ENSCCAG00000030718) #28	ENSCCAG00000036922 #12
Bolivian squirrel monkey	MODERN SPECIES	108	NELFA (ENSSBOG00000024481)	ENSSBOG00000021831 #7	POLN (ENSSBOG00000029730) #8	HAUS3 (ENSSBOG00000035151) #10	MXD4 (ENSSBOG00000020590) #11	ZFYVE28 (ENSSBOG00000024678) #12	CFAP99 (ENSSBOG00000026143) #13	ENSSBOG00000010070	RNF4 (ENSSBOG00000031127) #14	FAM193A (ENSSBOG00000035392) #15	ENSSBOG00000028277	SH3BP2 (ENSSBOG00000004638) #17	ADD1 (ENSSBOG00000032628) #18	ENSSBOG00000030513 #19	NOP14 (ENSSBOG00000034906) #20	GRK4 (ENSSBOG00000034886) #22	HTT (ENSSBOG00000001468) #23	MSANTD1 (ENSSBOG00000032002) #24	RGS12 (ENSSBOG00000001879) #25	ENSSBOG00000029708	HGFAC (ENSSBOG00000025765) #26	DOK7 (ENSSBOG00000034734) #27	LRPAP1 (ENSSBOG00000025745) #28	ENSSBOG00000026148	CPZ (ENSSBOG00000023106) #32	GPR78 (ENSSBOG00000036138) #33	TRMT44 (ENSSBOG00000025156) #34	ACOX3 (ENSSBOG00000022268) #35	HTRA3 (ENSSBOG00000019152) #36	SH3TC1 (ENSSBOG00000025058)	ABLIM2 (ENSSBOG00000018472)
Marmoset	MODERN SPECIES	15	NELFA (ENSCJAG00000039975)	C4orf48 (ENSCJAG00000044010)	NAT8L (ENSCJAG00000014504) #7	HAUS3 (ENSCJAG00000036903) #10	MXD4 (ENSCJAG00000066421) #11	ZFYVE28 (ENSCJAG00000038192) #12	CFAP99 (ENSCJAG00000038947) #13	RNF4 (ENSCJAG00000014371) #14	ENSCJAG00000057846	FAM193A (ENSCJAG00000014343) #15	TNIP2 (ENSCJAG00000014338) #16	SH3BP2 (ENSCJAG00000014306) #17	ADD1 (ENSCJAG00000014227) #18	ENSCJAG00000014217 #19	NOP14 (ENSCJAG00000014174) #20	GRK4 (ENSCJAG00000014129) #22	HTT (ENSCJAG00000014069) #23	MSANTD1 (ENSCJAG00000014062) #24	RGS12 (ENSCJAG00000014023) #25	HGFAC (ENSCJAG00000014013) #26	DOK7 (ENSCJAG00000014004) #27	LRPAP1 (ENSCJAG00000013237) #28	ADRA2C (ENSCJAG00000040081) #30	ENSCJAG00000055923	HMX1 (ENSCJAG00000044848) #31	CPZ (ENSCJAG00000021495) #32	GPR78 (ENSCJAG00000021496) #33	TRMT44 (ENSCJAG00000021498) #34	ACOX3 (ENSCJAG00000007110) #35	HTRA3 (ENSCJAG00000072254) #36	SH3TC1 (ENSCJAG00000013904)
Tarsier	MODERN SPECIES	3910												SH3BP2 (ENSTSYG00000006088) #17	ADD1 (ENSTSYG00000006020) #18	MFSD10 (ENSTSYG00000036487)	NOP14 (ENSTSYG00000007417) #20	GRK4 (ENSTSYG00000009085) #22	HTT (ENSTSYG00000014271) #23	MSANTD1 (ENSTSYG00000006549) #24	POU6F2 (ENSTSYG00000008452)
Strepsirrhini	ANCESTRAL SPECIES	40	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968
Mouse lemur	MODERN SPECIES	9	C4orf48 (ENSMICG00000046656)	NAT8L (ENSMICG00000045400) #7	POLN (ENSMICG00000047538) #8	HAUS3 (ENSMICG00000028831) #10	MXD4 (ENSMICG00000047939) #11	ZFYVE28 (ENSMICG00000031619) #12	CFAP99 (ENSMICG00000036187) #13	RNF4 (ENSMICG00000041515) #14	FAM193A (ENSMICG00000008863) #15	TNIP2 (ENSMICG00000008835) #16	SH3BP2 (ENSMICG00000002298) #17	ENSMICG00000030984	ADD1 (ENSMICG00000007785) #18	MFSD10 (ENSMICG00000007796)	NOP14 (ENSMICG00000007804) #20	GRK4 (ENSMICG00000006863) #22	HTT (ENSMICG00000006879) #23	MSANTD1 (ENSMICG00000031701) #24	ENSMICG00000030945	RGS12 (ENSMICG00000007623) #25	HGFAC (ENSMICG00000007634) #26	DOK7 (ENSMICG00000006754) #27	LRPAP1 (ENSMICG00000013565) #28	TACC3 (ENSMICG00000038424)	ENSMICG00000007821	WFDC8 (ENSMICG00000011960)	WFDC10A (ENSMICG00000013933)	WFDC11 (ENSMICG00000011178)	ENSMICG00000011195	WFDC13 (ENSMICG00000011200)	SPINT4 (ENSMICG00000004503)
Lemuriformes_a	ANCESTRAL SPECIES	115	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968
Coquerels sifaka	MODERN SPECIES	611										TNIP2 (ENSPCOG00000019392) #16	SH3BP2 (ENSPCOG00000013453) #17	ENSPCOG00000022580	ADD1 (ENSPCOG00000015333) #18	ENSPCOG00000021370 #19	NOP14 (ENSPCOG00000027916) #20	GRK4 (ENSPCOG00000028083) #22	HTT (ENSPCOG00000007028) #23	MSANTD1 (ENSPCOG00000018509) #24	RGS12 (ENSPCOG00000018256) #25	HGFAC (ENSPCOG00000013461) #26	DOK7 (ENSPCOG00000024093) #27	LRPAP1 (ENSPCOG00000022918) #28	ADRA2C (ENSPCOG00000021631) #30	HMX1 (ENSPCOG00000019742) #31	CPZ (ENSPCOG00000018885) #32	TRMT44 (ENSPCOG00000028809) #34	ACOX3 (ENSPCOG00000015967) #35	HTRA3 (ENSPCOG00000015549) #36	NANP (ENSPCOG00000022703)	ENSPCOG00000014381	NINL (ENSPCOG00000019338)
Greater bamboo lemur	MODERN SPECIES	142			HAUS3 (ENSPSMG00000021939) #10	MXD4 (ENSPSMG00000021932) #11	ZFYVE28 (ENSPSMG00000021894) #12	CFAP99 (ENSPSMG00000021870) #13	RNF4 (ENSPSMG00000021847) #14	ENSPSMG00000021804	FAM193A (ENSPSMG00000021759) #15	TNIP2 (ENSPSMG00000021697) #16	ENSPSMG00000021673	SH3BP2 (ENSPSMG00000021670) #17	ADD1 (ENSPSMG00000021592) #18	ENSPSMG00000021410 #19	NOP14 (ENSPSMG00000021287) #20	ENSPSMG00000021263 #22	HTT (ENSPSMG00000021240) #23	MSANTD1 (ENSPSMG00000021143) #24	RGS12 (ENSPSMG00000021108) #25	HGFAC (ENSPSMG00000021052) #26	DOK7 (ENSPSMG00000021025) #27	LRPAP1 (ENSPSMG00000021000) #28	ADRA2C (ENSPSMG00000020973) #30	HMX1 (ENSPSMG00000020966) #31	ENSPSMG00000020959	ENSPSMG00000020953	ENSPSMG00000020935	PPIE (ENSPSMG00000020918)	HPCAL4 (ENSPSMG00000020829)	NT5C1A (ENSPSMG00000020805)	HEYL (ENSPSMG00000020795)
Bushbaby	MODERN SPECIES	313	NSD2 (ENSOGAG00000014890)	NELFA (ENSOGAG00000029627)	C4orf48 (ENSOGAG00000031277)	NAT8L (ENSOGAG00000026595) #7	POLN (ENSOGAG00000011299) #8	HAUS3 (ENSOGAG00000032569) #10	MXD4 (ENSOGAG00000011305) #11	ZFYVE28 (ENSOGAG00000011309) #12	RNF4 (ENSOGAG00000010776) #14	FAM193A (ENSOGAG00000012386) #15	TNIP2 (ENSOGAG00000012391) #16	SH3BP2 (ENSOGAG00000008463) #17	ADD1 (ENSOGAG00000011061) #18	MFSD10 (ENSOGAG00000011069)	NOP14 (ENSOGAG00000011073) #20	GRK4 (ENSOGAG00000005619) #22	HTT (ENSOGAG00000007586) #23	MSANTD1 (ENSOGAG00000007605) #24	RGS12 (ENSOGAG00000007608) #25	DOK7 (ENSOGAG00000007622) #27	LRPAP1 (ENSOGAG00000007628) #28	ZNF879 (ENSOGAG00000032797)	GRM6 (ENSOGAG00000029331)	ENSOGAG00000034371	ZNF518B (ENSOGAG00000029956)	CLNK (ENSOGAG00000012251)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00530000066358
Tree shrew	MODERN SPECIES	5480											SH3BP2 (ENSTBEG00000012811) #17	ADD1 (ENSTBEG00000013055) #18	ENSTBEG00000013365 #19	ENSTBEG00000013501	NOP14 (ENSTBEG00000013627) #20	ENSTBEG00000014054 #22
Glires	ANCESTRAL SPECIES	8	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Rodentia	ANCESTRAL SPECIES	13	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Muroidea	ANCESTRAL SPECIES	17	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Prairie vole	MODERN SPECIES	88					Haus3 (ENSMOCG00000011866) #10	Mxd4 (ENSMOCG00000018278) #11	Zfyve28 (ENSMOCG00000013314) #12	Cfap99 (ENSMOCG00000000107) #13	Rnf4 (ENSMOCG00000018129) #14	Fam193a (ENSMOCG00000003768) #15	Tnip2 (ENSMOCG00000009761) #16	Sh3bp2 (ENSMOCG00000016109) #17	Add1 (ENSMOCG00000020050) #18	Mfsd10 (ENSMOCG00000003513)	Nop14 (ENSMOCG00000021638) #20	Grk4 (ENSMOCG00000014083) #22	Htt (ENSMOCG00000019391) #23	Msantd1 (ENSMOCG00000016043) #24	Rgs12 (ENSMOCG00000022287) #25	Hgfac (ENSMOCG00000010840) #26	Dok7 (ENSMOCG00000015164) #27	Lrpap1 (ENSMOCG00000001033) #28	Adra2c (ENSMOCG00000006396) #30	Hmx1 (ENSMOCG00000013589) #31	Cpz (ENSMOCG00000021090) #32	Trmt44 (ENSMOCG00000017807) #34	Acox3 (ENSMOCG00000005263) #35	Htra3 (ENSMOCG00000014875) #36	Sh3tc1 (ENSMOCG00000019986)	Ablim2 (ENSMOCG00000002107)	Afap1 (ENSMOCG00000015747)
Northern American deer mouse	MODERN SPECIES	1	Nsd2 (ENSPEMG00000017277)	Nelfa (ENSPEMG00000016134)	Gm1673 (ENSPEMG00000017743)	ENSPEMG00000026053 #7	Poln (ENSPEMG00000008981) #8	Mxd4 (ENSPEMG00000015018) #11	Zfyve28 (ENSPEMG00000003088) #12	Cfap99 (ENSPEMG00000000404) #13	Rnf4 (ENSPEMG00000017150) #14	Fam193a (ENSPEMG00000000297) #15	Tnip2 (ENSPEMG00000013340) #16	Sh3bp2 (ENSPEMG00000015767) #17	Add1 (ENSPEMG00000008717) #18	ENSPEMG00000011931 #19	Nop14 (ENSPEMG00000005399) #20	Grk4 (ENSPEMG00000003121) #22	Htt (ENSPEMG00000000805) #23	Msantd1 (ENSPEMG00000028370) #24	Rgs12 (ENSPEMG00000012259) #25	Hgfac (ENSPEMG00000008506) #26	Dok7 (ENSPEMG00000018287) #27	Lrpap1 (ENSPEMG00000019005) #28	ENSPEMG00000030404	Adra2c (ENSPEMG00000007034) #30	Hmx1 (ENSPEMG00000007689) #31	Cpz (ENSPEMG00000018359) #32	Trmt44 (ENSPEMG00000007598) #34	Acox3 (ENSPEMG00000008809) #35	Htra3 (ENSPEMG00000009866) #36	Sh3tc1 (ENSPEMG00000015098)	Ablim2 (ENSPEMG00000015528)
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Chinese hamster chok1gshd	MODERN SPECIES	44	Nelfa (ENSCGRG00001018745)	Gm1673 (ENSCGRG00001020043)	Nat8l (ENSCGRG00001023978) #7	Poln (ENSCGRG00001007876) #8	Haus3 (ENSCGRG00001006121) #10	Mxd4 (ENSCGRG00001011783) #11	Zfyve28 (ENSCGRG00001015693) #12	Cfap99 (ENSCGRG00001018964) #13	Rnf4 (ENSCGRG00001022472) #14	Fam193a (ENSCGRG00001011437) #15	Tnip2 (ENSCGRG00001018278) #16	Sh3bp2 (ENSCGRG00001023205) #17	Add1 (ENSCGRG00001008876) #18	ENSCGRG00001023141 #19	Nop14 (ENSCGRG00001009013) #20	Grk4 (ENSCGRG00001011864) #22	Htt (ENSCGRG00001024008) #23	ENSCGRG00001017546	Msantd1 (ENSCGRG00001020279) #24	Rgs12 (ENSCGRG00001009377) #25	Hgfac (ENSCGRG00001011915) #26	Dok7 (ENSCGRG00001018277) #27	Lrpap1 (ENSCGRG00001019166) #28	Adra2c (ENSCGRG00001008328) #30	Hmx1 (ENSCGRG00001020782) #31	Cpz (ENSCGRG00001012760) #32	Trmt44 (ENSCGRG00001016915) #34	Acox3 (ENSCGRG00001018521) #35	Htra3 (ENSCGRG00001010385) #36	Sh3tc1 (ENSCGRG00001019370)	Ablim2 (ENSCGRG00001019600)
Golden Hamster	MODERN SPECIES	632	Nelfa (ENSMAUG00000022097)	Gm1673 (ENSMAUG00000019500)	ENSMAUG00000020607 #7	Poln (ENSMAUG00000008534) #8	Haus3 (ENSMAUG00000000818) #10	Mxd4 (ENSMAUG00000014477) #11	ENSMAUG00000016411 #12	Cfap99 (ENSMAUG00000018621) #13	Rnf4 (ENSMAUG00000022006) #14	Fam193a (ENSMAUG00000013458) #15	Tnip2 (ENSMAUG00000000863) #16	Sh3bp2 (ENSMAUG00000014154) #17	Add1 (ENSMAUG00000010417) #18	ENSMAUG00000009757 #19	Nop14 (ENSMAUG00000011891) #20	Grk4 (ENSMAUG00000019885) #22	Htt (ENSMAUG00000016135) #23	Msantd1 (ENSMAUG00000019122) #24	Rgs12 (ENSMAUG00000020471) #25	Hgfac (ENSMAUG00000014240) #26	Dok7 (ENSMAUG00000013714) #27	Lrpap1 (ENSMAUG00000000794) #28	Adra2c (ENSMAUG00000010360) #30	Hmx1 (ENSMAUG00000014298) #31	Cpz (ENSMAUG00000021426) #32	Trmt44 (ENSMAUG00000021974) #34	Acox3 (ENSMAUG00000020686) #35	Htra3 (ENSMAUG00000005565) #36	Sh3tc1 (ENSMAUG00000021685)	Ablim2 (ENSMAUG00000015012)	Afap1 (ENSMAUG00000011963)
Murinae	ANCESTRAL SPECIES	12	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus	ANCESTRAL SPECIES	14	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Steppe mouse	MODERN SPECIES	3132	Nat8l (ENSMSIG00000021182) #7	Poln (ENSMSIG00000021195) #8	Haus3 (ENSMSIG00000021389) #10	ENSMSIG00000021408 #11	ENSMSIG00000021448	Zfyve28 (ENSMSIG00000021454) #12	Cfap99 (ENSMSIG00000021491) #13	ENSMSIG00000021509	ENSMSIG00000021525 #14	Fam193a (ENSMSIG00000021548) #15	Tnip2 (ENSMSIG00000021599) #16	Sh3bp2 (ENSMSIG00000021641) #17	Add1 (ENSMSIG00000021740) #18	Mfsd10 (ENSMSIG00000022303)	Nop14 (ENSMSIG00000022337) #20	Grk4 (ENSMSIG00000022371) #22	Htt (ENSMSIG00000022431) #23	Msantd1 (ENSMSIG00000022619) #24	Rgs12 (ENSMSIG00000022662) #25	Hgfac (ENSMSIG00000022868) #26	Dok7 (ENSMSIG00000022905) #27	Lrpap1 (ENSMSIG00000022985) #28	Adra2c (ENSMSIG00000023019) #30	ENSMSIG00000023027 #31	Cpz (ENSMSIG00000023039) #32	Trmt44 (ENSMSIG00000023059) #34	Acox3 (ENSMSIG00000023076) #35	Htra3 (ENSMSIG00000023159) #36	Sh3tc1 (ENSMSIG00000023220)	Ablim2 (ENSMSIG00000023274)
spretus	MODERN SPECIES	14	Nelfa (MGP_SPRETEiJ_G0028119)	MGP_SPRETEiJ_G0028120	Nat8l (MGP_SPRETEiJ_G0028121) #7	Poln (MGP_SPRETEiJ_G0028122) #8	Haus3 (MGP_SPRETEiJ_G0028123) #10	Mxd4 (MGP_SPRETEiJ_G0028124) #11	Zfyve28 (MGP_SPRETEiJ_G0028125) #12	Cfap99 (MGP_SPRETEiJ_G0028126) #13	Rnf4 (MGP_SPRETEiJ_G0028127) #14	Fam193a (MGP_SPRETEiJ_G0028128) #15	Tnip2 (MGP_SPRETEiJ_G0028129) #16	Sh3bp2 (MGP_SPRETEiJ_G0028130) #17	Add1 (MGP_SPRETEiJ_G0028131) #18	Mfsd10 (MGP_SPRETEiJ_G0028132)	Nop14 (MGP_SPRETEiJ_G0028133) #20	MGP_SPRETEiJ_G0028134 #22	Htt (MGP_SPRETEiJ_G0028135) #23	Msantd1 (MGP_SPRETEiJ_G0028136) #24	Rgs12 (MGP_SPRETEiJ_G0028137) #25	Hgfac (MGP_SPRETEiJ_G0028138) #26	Dok7 (MGP_SPRETEiJ_G0028139) #27	Lrpap1 (MGP_SPRETEiJ_G0028140) #28	Adra2c (MGP_SPRETEiJ_G0028141) #30	Hmx1 (MGP_SPRETEiJ_G0028142) #31	Cpz (MGP_SPRETEiJ_G0028143) #32	Trmt44 (MGP_SPRETEiJ_G0028144) #34	Acox3 (MGP_SPRETEiJ_G0028145) #35	Htra3 (MGP_SPRETEiJ_G0028146) #36	Sh3tc1 (MGP_SPRETEiJ_G0028147)	Ablim2 (MGP_SPRETEiJ_G0028148)	Afap1 (MGP_SPRETEiJ_G0028149)
Mouse	MODERN SPECIES	14	Nelfa (ENSMUSG00000029111)	Gm1673 (ENSMUSG00000070858)	Nat8l (ENSMUSG00000048142) #7	Poln (ENSMUSG00000045102) #8	Haus3 (ENSMUSG00000079555) #10	Mxd4 (ENSMUSG00000037235) #11	Zfyve28 (ENSMUSG00000037224) #12	Cfap99 (ENSMUSG00000109572) #13	Rnf4 (ENSMUSG00000029110) #14	Fam193a (ENSMUSG00000037210) #15	Tnip2 (ENSMUSG00000059866) #16	Sh3bp2 (ENSMUSG00000054520) #17	Add1 (ENSMUSG00000029106) #18	Mfsd10 (ENSMUSG00000001082)	Nop14 (ENSMUSG00000036693) #20	Grk4 (ENSMUSG00000052783) #22	Htt (ENSMUSG00000029104) #23	Msantd1 (ENSMUSG00000051246) #24	Rgs12 (ENSMUSG00000029101) #25	Hgfac (ENSMUSG00000029102) #26	Dok7 (ENSMUSG00000044716) #27	Lrpap1 (ENSMUSG00000029103) #28	Adra2c (ENSMUSG00000045318) #30	Hmx1 (ENSMUSG00000067438) #31	Cpz (ENSMUSG00000036596) #32	Trmt44 (ENSMUSG00000029097) #34	Acox3 (ENSMUSG00000029098) #35	Htra3 (ENSMUSG00000029096) #36	Sh3tc1 (ENSMUSG00000036553)	Ablim2 (ENSMUSG00000029095)	Afap1 (ENSMUSG00000029094)
Ryukyu mouse	MODERN SPECIES	14	Nelfa (MGP_CAROLIEiJ_G0027123)	MGP_CAROLIEiJ_G0027124	Nat8l (MGP_CAROLIEiJ_G0027125) #7	Poln (MGP_CAROLIEiJ_G0027126) #8	Haus3 (MGP_CAROLIEiJ_G0027127) #10	Mxd4 (MGP_CAROLIEiJ_G0027128) #11	Zfyve28 (MGP_CAROLIEiJ_G0027129) #12	Cfap99 (MGP_CAROLIEiJ_G0027130) #13	Rnf4 (MGP_CAROLIEiJ_G0027131) #14	Fam193a (MGP_CAROLIEiJ_G0027132) #15	Tnip2 (MGP_CAROLIEiJ_G0027133) #16	Sh3bp2 (MGP_CAROLIEiJ_G0027134) #17	Add1 (MGP_CAROLIEiJ_G0027135) #18	Mfsd10 (MGP_CAROLIEiJ_G0027136)	Nop14 (MGP_CAROLIEiJ_G0027137) #20	Grk4 (MGP_CAROLIEiJ_G0027138) #22	Htt (MGP_CAROLIEiJ_G0027139) #23	Msantd1 (MGP_CAROLIEiJ_G0027140) #24	Rgs12 (MGP_CAROLIEiJ_G0027141) #25	Hgfac (MGP_CAROLIEiJ_G0027142) #26	Dok7 (MGP_CAROLIEiJ_G0027143) #27	Lrpap1 (MGP_CAROLIEiJ_G0027144) #28	Adra2c (MGP_CAROLIEiJ_G0027145) #30	Hmx1 (MGP_CAROLIEiJ_G0027146) #31	Cpz (MGP_CAROLIEiJ_G0027147) #32	Trmt44 (MGP_CAROLIEiJ_G0027148) #34	Acox3 (MGP_CAROLIEiJ_G0027149) #35	Htra3 (MGP_CAROLIEiJ_G0027150) #36	Sh3tc1 (MGP_CAROLIEiJ_G0027151)	Ablim2 (MGP_CAROLIEiJ_G0027152)	Afap1 (MGP_CAROLIEiJ_G0027153)
Shrew mouse	MODERN SPECIES	4	Nelfa (MGP_PahariEiJ_G0016907)	MGP_PahariEiJ_G0016908	Nat8l (MGP_PahariEiJ_G0016909) #7	Poln (MGP_PahariEiJ_G0016910) #8	Haus3 (MGP_PahariEiJ_G0016911) #10	Mxd4 (MGP_PahariEiJ_G0016912) #11	Zfyve28 (MGP_PahariEiJ_G0016913) #12	Cfap99 (MGP_PahariEiJ_G0016914) #13	MGP_PahariEiJ_G0016915 #14	Fam193a (MGP_PahariEiJ_G0016916) #15	Tnip2 (MGP_PahariEiJ_G0016917) #16	Sh3bp2 (MGP_PahariEiJ_G0016918) #17	Add1 (MGP_PahariEiJ_G0016919) #18	Mfsd10 (MGP_PahariEiJ_G0016920)	Nop14 (MGP_PahariEiJ_G0016921) #20	Grk4 (MGP_PahariEiJ_G0016922) #22	Htt (MGP_PahariEiJ_G0016923) #23	Msantd1 (MGP_PahariEiJ_G0016924) #24	Rgs12 (MGP_PahariEiJ_G0016925) #25	Hgfac (MGP_PahariEiJ_G0016926) #26	Dok7 (MGP_PahariEiJ_G0016927) #27	Lrpap1 (MGP_PahariEiJ_G0016928) #28	Adra2c (MGP_PahariEiJ_G0016929) #30	Hmx1 (MGP_PahariEiJ_G0016930) #31	Cpz (MGP_PahariEiJ_G0016931) #32	Trmt44 (MGP_PahariEiJ_G0016932) #34	Acox3 (MGP_PahariEiJ_G0016933) #35	Htra3 (MGP_PahariEiJ_G0016934) #36	Sh3tc1 (MGP_PahariEiJ_G0016935)	Ablim2 (MGP_PahariEiJ_G0016936)	Afap1 (MGP_PahariEiJ_G0016937)
Rat	MODERN SPECIES	5	Nsd2 (ENSRNOG00000038140)	Nelfa (ENSRNOG00000015474)	RGD1560394 (ENSRNOG00000065022)	Nat8l (ENSRNOG00000049351) #7	Poln (ENSRNOG00000069005) #8	Mxd4 (ENSRNOG00000015033) #11	Zfyve28 (ENSRNOG00000014874) #12	Cfap99 (ENSRNOG00000058434) #13	Rnf4 (ENSRNOG00000013930) #14	Fam193a (ENSRNOG00000013832) #15	Tnip2 (ENSRNOG00000013805) #16	Sh3bp2 (ENSRNOG00000013747) #17	Add1 (ENSRNOG00000013039) #18	Mfsd10 (ENSRNOG00000012534)	Nop14 (ENSRNOG00000012147) #20	Grk4 (ENSRNOG00000011847) #22	Htt (ENSRNOG00000011073) #23	Msantd1 (ENSRNOG00000064777) #24	LOC108352780 (ENSRNOG00000030162)	Rgs12 (ENSRNOG00000030568) #25	Hgfac (ENSRNOG00000009572) #26	Dok7 (ENSRNOG00000022419) #27	Lrpap1 (ENSRNOG00000009313) #28	Adra2c (ENSRNOG00000009299) #30	Hmx1 (ENSRNOG00000009154) #31	Cpz (ENSRNOG00000008947) #32	Trmt44 (ENSRNOG00000008898) #34	Acox3 (ENSRNOG00000008474) #35	Htra3 (ENSRNOG00000008182) #36	Sh3tc1 (ENSRNOG00000007993)	Ablim2 (ENSRNOG00000007882)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1177	Gm1673 (ENSNGAG00000023348)	ENSNGAG00000002900 #7	Poln (ENSNGAG00000022997) #8	Haus3 (ENSNGAG00000014413) #10	Mxd4 (ENSNGAG00000016526) #11	ENSNGAG00000014521 #12	Cfap99 (ENSNGAG00000020586) #13	Rnf4 (ENSNGAG00000018375) #14	Fam193a (ENSNGAG00000021458) #15	Tnip2 (ENSNGAG00000020375) #16	Sh3bp2 (ENSNGAG00000018119) #17	Add1 (ENSNGAG00000013896) #18	ENSNGAG00000004792 #19	ENSNGAG00000019094	Nop14 (ENSNGAG00000023183) #20	Grk4 (ENSNGAG00000019026) #22	Htt (ENSNGAG00000014294) #23	Msantd1 (ENSNGAG00000022576) #24	Rgs12 (ENSNGAG00000019986) #25	Hgfac (ENSNGAG00000016815) #26	Dok7 (ENSNGAG00000018034) #27	Lrpap1 (ENSNGAG00000014620) #28
Lesser Egyptian jerboa	MODERN SPECIES	58	Gm1673 (ENSJJAG00000006076)	Nat8l (ENSJJAG00000024226) #7	Poln (ENSJJAG00000012540) #8	Haus3 (ENSJJAG00000013628) #10	ENSJJAG00000017036 #11	ENSJJAG00000000555 #12	Cfap99 (ENSJJAG00000019360) #13	ENSJJAG00000014107 #14	ENSJJAG00000000617	Fam193a (ENSJJAG00000013646) #15	Tnip2 (ENSJJAG00000021336) #16	Sh3bp2 (ENSJJAG00000022545) #17	Add1 (ENSJJAG00000011333) #18	ENSJJAG00000019357 #19	Nop14 (ENSJJAG00000006861) #20	Grk4 (ENSJJAG00000012324) #22	Htt (ENSJJAG00000014310) #23	Msantd1 (ENSJJAG00000015075) #24	ENSJJAG00000022086 #25	ENSJJAG00000022095 #25	Hgfac (ENSJJAG00000017476) #26	Dok7 (ENSJJAG00000017296) #27	Lrpap1 (ENSJJAG00000024126) #28	Hmx1 (ENSJJAG00000022946) #31	Cpz (ENSJJAG00000023616) #32	Trmt44 (ENSJJAG00000018255) #34	Acox3 (ENSJJAG00000015539) #35	Htra3 (ENSJJAG00000021963) #36	Sh3tc1 (ENSJJAG00000023163)	Ablim2 (ENSJJAG00000019184)	Afap1 (ENSJJAG00000000844)
Kangaroo rat	MODERN SPECIES	390	Gm1673 (ENSDORG00000009221)	ENSDORG00000012646 #7	Poln (ENSDORG00000012647) #8	Haus3 (ENSDORG00000012649) #10	Mxd4 (ENSDORG00000000173) #11	ENSDORG00000026396 #12	Cfap99 (ENSDORG00000025036) #13	Rnf4 (ENSDORG00000006675) #14	Fam193a (ENSDORG00000016576) #15	ENSDORG00000016577 #16	Sh3bp2 (ENSDORG00000010509) #17	Htt (ENSDORG00000003272) #23	ENSDORG00000023495 #18	ENSDORG00000001192 #19	Nop14 (ENSDORG00000001193) #20	ENSDORG00000001194 #22	Msantd1 (ENSDORG00000003277) #24	Rgs12 (ENSDORG00000014704) #25	Hgfac (ENSDORG00000014709) #26	Dok7 (ENSDORG00000014713) #27	Lrpap1 (ENSDORG00000014714) #28	Adra2c (ENSDORG00000029260) #30	Cpz (ENSDORG00000009339) #32	Trmt44 (ENSDORG00000006411) #34	Acox3 (ENSDORG00000015374) #35	Htra3 (ENSDORG00000002142) #36	Sh3tc1 (ENSDORG00000007236)	Ablim2 (ENSDORG00000012609)	Afap1 (ENSDORG00000006803)	Sorcs2 (ENSDORG00000027668)	Grpel1 (ENSDORG00000016660)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00390000013043.f	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00940000164052	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00390000005342	ENSGT00390000013043.f	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00940000164052	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.y #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	166												ENSCPOG00000038404	ADD1 (ENSCPOG00000003357) #18	ENSCPOG00000021874	NOP14 (ENSCPOG00000012869) #20	ENSCPOG00000032158 #22	ENSCPOG00000012872 #22	HTT (ENSCPOG00000007218) #23	MSANTD1 (ENSCPOG00000008697) #24	RGS12 (ENSCPOG00000005334) #25	HGFAC (ENSCPOG00000023599) #26	DOK7 (ENSCPOG00000020197) #27	LRPAP1 (ENSCPOG00000005331) #28	ENSCPOG00000023934	HMX1 (ENSCPOG00000022976) #31	CPZ (ENSCPOG00000025982) #32	TRMT44 (ENSCPOG00000032399) #34	ACOX3 (ENSCPOG00000024370) #35	HTRA3 (ENSCPOG00000019986) #36	SH3TC1 (ENSCPOG00000004747)	ABLIM2 (ENSCPOG00000009704)
Guinea pig	MODERN SPECIES	166											ENSCPOG00000038404	ADD1 (ENSCPOG00000003357) #18	ENSCPOG00000021874	NOP14 (ENSCPOG00000012869) #20	ENSCPOG00000032158 #22	ENSCPOG00000012872 #22	HTT (ENSCPOG00000007218) #23	MSANTD1 (ENSCPOG00000008697) #24	RGS12 (ENSCPOG00000005334) #25	HGFAC (ENSCPOG00000023599) #26	DOK7 (ENSCPOG00000020197) #27	LRPAP1 (ENSCPOG00000005331) #28	ENSCPOG00000023934	HMX1 (ENSCPOG00000022976) #31	CPZ (ENSCPOG00000025982) #32	TRMT44 (ENSCPOG00000032399) #34	ACOX3 (ENSCPOG00000024370) #35	HTRA3 (ENSCPOG00000019986) #36	SH3TC1 (ENSCPOG00000004747)	ABLIM2 (ENSCPOG00000009704)	AFAP1 (ENSCPOG00000023490)
Hystricomorpha_b	ANCESTRAL SPECIES	37	ENSGT00390000005342	ENSGT00390000013043.f	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00940000164052	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.y #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a
Degu	MODERN SPECIES	47	ENSODEG00000011723 #7	ENSODEG00000011259	POLN (ENSODEG00000011265) #8	HAUS3 (ENSODEG00000011986) #10	MXD4 (ENSODEG00000011512) #11	ENSODEG00000011568 #12	CFAP99 (ENSODEG00000011882) #13	RNF4 (ENSODEG00000011133) #14	ENSODEG00000010562	FAM193A (ENSODEG00000010949) #15	ENSODEG00000010959	SH3BP2 (ENSODEG00000011814) #17	ADD1 (ENSODEG00000010953) #18	ENSODEG00000011022 #19	NOP14 (ENSODEG00000011223) #20	GRK4 (ENSODEG00000012144) #22	HTT (ENSODEG00000010889) #23	MSANTD1 (ENSODEG00000009931) #24	ENSODEG00000019744	RGS12 (ENSODEG00000011606) #25	HGFAC (ENSODEG00000010427) #26	DOK7 (ENSODEG00000010960) #27	LRPAP1 (ENSODEG00000011862) #28	ADRA2C (ENSODEG00000009910) #30	CPZ (ENSODEG00000010389) #32	TRMT44 (ENSODEG00000009730) #34	ACOX3 (ENSODEG00000009811) #35	HTRA3 (ENSODEG00000010864) #36	SH3TC1 (ENSODEG00000010846)	ABLIM2 (ENSODEG00000009883)	AFAP1 (ENSODEG00000009173)
Long-tailed chinchilla	MODERN SPECIES	221	NELFA (ENSCLAG00000012299)	C4orf48 (ENSCLAG00000009344)	ENSCLAG00000009488 #7	POLN (ENSCLAG00000010355) #8	HAUS3 (ENSCLAG00000010866) #10	MXD4 (ENSCLAG00000011445) #11	ZFYVE28 (ENSCLAG00000009540) #12	CFAP99 (ENSCLAG00000012930) #13	RNF4 (ENSCLAG00000014072) #14	FAM193A (ENSCLAG00000014296) #15	ENSCLAG00000006931	SH3BP2 (ENSCLAG00000008009) #17	ADD1 (ENSCLAG00000011442) #18	ENSCLAG00000011338 #19	NOP14 (ENSCLAG00000008622) #20	GRK4 (ENSCLAG00000007161) #22	HTT (ENSCLAG00000007604) #23	MSANTD1 (ENSCLAG00000008147) #24	ENSCLAG00000008016 #25	HGFAC (ENSCLAG00000008342) #26	DOK7 (ENSCLAG00000010230) #27	LRPAP1 (ENSCLAG00000007328) #28	CPZ (ENSCLAG00000010243) #32	TRMT44 (ENSCLAG00000008063) #34	ACOX3 (ENSCLAG00000009133) #35	HTRA3 (ENSCLAG00000007335) #36	SH3TC1 (ENSCLAG00000007496)	ABLIM2 (ENSCLAG00000008762)	AFAP1 (ENSCLAG00000011637)	SORCS2 (ENSCLAG00000008556)	PSAPL1 (ENSCLAG00000018086)
Naked mole-rat female	MODERN SPECIES	1	LETM1 (ENSHGLG00000004719)	ENSHGLG00000044127	NELFA (ENSHGLG00000004622)	ENSHGLG00000020481	ENSHGLG00000010063	POLN (ENSHGLG00000009000) #8	HAUS3 (ENSHGLG00000051007) #10	ENSHGLG00000047915	RNF4 (ENSHGLG00000046605) #14	ENSHGLG00000006269	ENSHGLG00000037168	TNIP2 (ENSHGLG00000005230) #16	SH3BP2 (ENSHGLG00000005188) #17	ADD1 (ENSHGLG00000005103) #18	ENSHGLG00000005051 #19	GRK4 (ENSHGLG00000016893) #22	ENSHGLG00000048089	HTT (ENSHGLG00000014813) #23	MSANTD1 (ENSHGLG00000015087) #24	ENSHGLG00000016876 #25	ENSHGLG00000016854 #26	DOK7 (ENSHGLG00000018845) #27	ENSHGLG00000019431 #28	ENSHGLG00000041494	ENSHGLG00000021093	ENSHGLG00000038773 #30	ENSHGLG00000013817 #32	TRMT44 (ENSHGLG00000014808) #34	ACOX3 (ENSHGLG00000014645) #35	HTRA3 (ENSHGLG00000014617) #36	SH3TC1 (ENSHGLG00000014578)
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Marmotini	ANCESTRAL SPECIES	26	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.o #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Marmotini_b	ANCESTRAL SPECIES	33	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.o #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Arctic ground squirrel	MODERN SPECIES	154					HAUS3 (ENSUPAG00010005760) #10	MXD4 (ENSUPAG00010005747) #11	ZFYVE28 (ENSUPAG00010005731) #12	CFAP99 (ENSUPAG00010005640) #13	RNF4 (ENSUPAG00010005616) #14	FAM193A (ENSUPAG00010005579) #15	TNIP2 (ENSUPAG00010005563) #16	SH3BP2 (ENSUPAG00010005541) #17	ADD1 (ENSUPAG00010005437) #18	ENSUPAG00010005416 #19	NOP14 (ENSUPAG00010005404) #20	GRK4 (ENSUPAG00010005384) #22	HTT (ENSUPAG00010005314) #23	MSANTD1 (ENSUPAG00010005291) #24	RGS12 (ENSUPAG00010005196) #25	HGFAC (ENSUPAG00010005168) #26	DOK7 (ENSUPAG00010005159) #27	LRPAP1 (ENSUPAG00010005144) #28	ADRA2C (ENSUPAG00010005139) #30	HMX1 (ENSUPAG00010005133) #31	CPZ (ENSUPAG00010005113) #32	TRMT44 (ENSUPAG00010005096) #34	ACOX3 (ENSUPAG00010005046) #35	HTRA3 (ENSUPAG00010005039) #36	SH3TC1 (ENSUPAG00010005003)	ABLIM2 (ENSUPAG00010004675)	AFAP1 (ENSUPAG00010004645)
Squirrel	MODERN SPECIES	77	NSD2 (ENSSTOG00000003369)	NELFA (ENSSTOG00000003421)	ENSSTOG00000024159 #7	POLN (ENSSTOG00000001059) #8	HAUS3 (ENSSTOG00000020375) #10	MXD4 (ENSSTOG00000028770) #11	ZFYVE28 (ENSSTOG00000012220) #12	CFAP99 (ENSSTOG00000032892) #13	ENSSTOG00000011101 #14	FAM193A (ENSSTOG00000007426) #15	TNIP2 (ENSSTOG00000007444) #16	SH3BP2 (ENSSTOG00000028939) #17	ADD1 (ENSSTOG00000009726) #18	ENSSTOG00000025349 #19	NOP14 (ENSSTOG00000009739) #20	GRK4 (ENSSTOG00000009753) #22	HTT (ENSSTOG00000009766) #23	MSANTD1 (ENSSTOG00000001629) #24	RGS12 (ENSSTOG00000022380) #25	HGFAC (ENSSTOG00000025456) #26	DOK7 (ENSSTOG00000004961) #27	LRPAP1 (ENSSTOG00000002323) #28	HMX1 (ENSSTOG00000034792) #31	CPZ (ENSSTOG00000027638) #32	TRMT44 (ENSSTOG00000014057) #34	ACOX3 (ENSSTOG00000016342) #35	HTRA3 (ENSSTOG00000021150) #36	SH3TC1 (ENSSTOG00000020377)	ABLIM2 (ENSSTOG00000024265)	AFAP1 (ENSSTOG00000023755)	SORCS2 (ENSSTOG00000021488)
Alpin marmot	MODERN SPECIES	9	NSD2 (ENSMMMG00000010052)	NELFA (ENSMMMG00000010244)	ENSMMMG00000010260 #7	POLN (ENSMMMG00000010281) #8	HAUS3 (ENSMMMG00000010462) #10	MXD4 (ENSMMMG00000010466) #11	ZFYVE28 (ENSMMMG00000010480) #12	CFAP99 (ENSMMMG00000010512) #13	RNF4 (ENSMMMG00000010533) #14	FAM193A (ENSMMMG00000010560) #15	TNIP2 (ENSMMMG00000010616) #16	SH3BP2 (ENSMMMG00000010638) #17	ADD1 (ENSMMMG00000010678) #18	ENSMMMG00000012548 #19	NOP14 (ENSMMMG00000012574) #20	GRK4 (ENSMMMG00000012594) #22	HTT (ENSMMMG00000012619) #23	MSANTD1 (ENSMMMG00000012701) #24	RGS12 (ENSMMMG00000012736) #25	HGFAC (ENSMMMG00000013025) #26	LRPAP1 (ENSMMMG00000013053) #28	ADRA2C (ENSMMMG00000014251) #30	CPZ (ENSMMMG00000014261) #32	TRMT44 (ENSMMMG00000014276) #34	ACOX3 (ENSMMMG00000014316) #35	HTRA3 (ENSMMMG00000014366) #36	SH3TC1 (ENSMMMG00000014397)	ABLIM2 (ENSMMMG00000014483)	AFAP1 (ENSMMMG00000014805)	SORCS2 (ENSMMMG00000014836)	GRPEL1 (ENSMMMG00000014999)
Eurasian red squirrel	MODERN SPECIES	18	ENSSVLG00005018048	ENSSVLG00005018005	POLN (ENSSVLG00005017739) #8	HAUS3 (ENSSVLG00005017655) #10	MXD4 (ENSSVLG00005017609) #11	ENSSVLG00005017576 #12	ENSSVLG00005017470 #12	CFAP99 (ENSSVLG00005017288) #13	RNF4 (ENSSVLG00005017190) #14	FAM193A (ENSSVLG00005016851) #15	TNIP2 (ENSSVLG00005016767) #16	SH3BP2 (ENSSVLG00005016520) #17	ADD1 (ENSSVLG00005016341) #18	ENSSVLG00005016233 #19	NOP14 (ENSSVLG00005016178) #20	GRK4 (ENSSVLG00005015841) #22	HTT (ENSSVLG00005015171) #23	MSANTD1 (ENSSVLG00005015035) #24	RGS12 (ENSSVLG00005014175) #25	HGFAC (ENSSVLG00005013667) #26	DOK7 (ENSSVLG00005013571) #27	LRPAP1 (ENSSVLG00005013407) #28	ADRA2C (ENSSVLG00005013315) #30	HMX1 (ENSSVLG00005013295) #31	CPZ (ENSSVLG00005013141) #32	TRMT44 (ENSSVLG00005012786) #34	ACOX3 (ENSSVLG00005012401) #35	HTRA3 (ENSSVLG00005012341) #36	SH3TC1 (ENSSVLG00005012110)	ABLIM2 (ENSSVLG00005010614)	AFAP1 (ENSSVLG00005010402)
Lagomorpha	ANCESTRAL SPECIES	187			ENSGT00940000157429	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24
Rabbit	MODERN SPECIES	529	ENSOCUG00000033780	ENSOCUG00000005245	ENSOCUG00000027729 #7	POLN (ENSOCUG00000005626) #8	HAUS3 (ENSOCUG00000021362) #10	MXD4 (ENSOCUG00000005063) #11	ENSOCUG00000004377 #12	ENSOCUG00000033870	CFAP99 (ENSOCUG00000036986) #13	ENSOCUG00000004998 #14	FAM193A (ENSOCUG00000017730) #15	TNIP2 (ENSOCUG00000010033) #16	SH3BP2 (ENSOCUG00000000161) #17	ADD1 (ENSOCUG00000024333) #18	NOP14 (ENSOCUG00000004725) #20	GRK4 (ENSOCUG00000005838) #22	HTT (ENSOCUG00000009805) #23	MSANTD1 (ENSOCUG00000023300) #24
Pika	MODERN SPECIES	839																GRK4 (ENSOPRG00000002372) #22
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160151 #22
Common shrew	MODERN SPECIES	1802																ENSSARG00000013101 #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Suina	ANCESTRAL SPECIES	33	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Chacoan peccary	MODERN SPECIES	967					MXD4 (ENSCWAG00000019836) #11	ENSCWAG00000019856 #12	ENSCWAG00000019870 #12	CFAP99 (ENSCWAG00000019899) #13	RNF4 (ENSCWAG00000019952) #14	FAM193A (ENSCWAG00000020075) #15	TNIP2 (ENSCWAG00000020259) #16	SH3BP2 (ENSCWAG00000020282) #17	ADD1 (ENSCWAG00000020365) #18	ENSCWAG00000020420 #19	NOP14 (ENSCWAG00000020518) #20	GRK4 (ENSCWAG00000020571) #22	HTT (ENSCWAG00000020675) #23	MSANTD1 (ENSCWAG00000020872) #24	ENSCWAG00000020900 #25
Pig	MODERN SPECIES	16	NELFA (ENSSSCG00000008681)	C4orf48 (ENSSSCG00000063120)	NAT8L (ENSSSCG00000033541) #7	POLN (ENSSSCG00000027718) #8	MXD4 (ENSSSCG00000008687) #11	ZFYVE28 (ENSSSCG00000008689) #12	CFAP99 (ENSSSCG00000034633) #13	ENSSSCG00000054601	RNF4 (ENSSSCG00000008690) #14	FAM193A (ENSSSCG00000029745) #15	TNIP2 (ENSSSCG00000008691) #16	SH3BP2 (ENSSSCG00000022004) #17	ADD1 (ENSSSCG00000008692) #18	MFSD10 (ENSSSCG00000008695)	NOP14 (ENSSSCG00000008693) #20	GRK4 (ENSSSCG00000008694) #22	HTT (ENSSSCG00000008697) #23	MSANTD1 (ENSSSCG00000058478) #24	RGS12 (ENSSSCG00000008698) #25	HGFAC (ENSSSCG00000008700) #26	LRPAP1 (ENSSSCG00000008701) #28	ADRA2C (ENSSSCG00000008703) #30	HMX1 (ENSSSCG00000008720) #31	CPZ (ENSSSCG00000032151) #32	TRMT44 (ENSSSCG00000033873) #34	ACOX3 (ENSSSCG00000008724) #35	HTRA3 (ENSSSCG00000008723) #36	SH3TC1 (ENSSSCG00000008722)	ABLIM2 (ENSSSCG00000008721)	AFAP1 (ENSSSCG00000023907)	SORCS2 (ENSSSCG00000037539)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Camelidae	ANCESTRAL SPECIES	22	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT00940000164031	ENSGT01030000234563.b.a.a
Arabian camel	MODERN SPECIES	11	C4orf48 (ENSCDRG00005004867)	ENSCDRG00005004858 #7	POLN (ENSCDRG00005004833) #8	HAUS3 (ENSCDRG00005004806) #10	MXD4 (ENSCDRG00005004719) #11	ENSCDRG00005004698 #12	ENSCDRG00005004685 #12	CFAP99 (ENSCDRG00005004620) #13	RNF4 (ENSCDRG00005004592) #14	FAM193A (ENSCDRG00005004529) #15	TNIP2 (ENSCDRG00005004514) #16	SH3BP2 (ENSCDRG00005004400) #17	ADD1 (ENSCDRG00005004116) #18	MFSD10 (ENSCDRG00005003971)	NOP14 (ENSCDRG00005003889) #20	GRK4 (ENSCDRG00005003589) #22	HTT (ENSCDRG00005002844) #23	MSANTD1 (ENSCDRG00005002625) #24	RGS12 (ENSCDRG00005002591) #25	HGFAC (ENSCDRG00005002564) #26	DOK7 (ENSCDRG00005002538) #27	LRPAP1 (ENSCDRG00005002510) #28	CPZ (ENSCDRG00005002249) #32	TRMT44 (ENSCDRG00005002204) #34	ACOX3 (ENSCDRG00005002157) #35	HTRA3 (ENSCDRG00005002125) #36	SH3TC1 (ENSCDRG00005002064)	ABLIM2 (ENSCDRG00005001968)	AFAP1 (ENSCDRG00005001874)	PSAPL1 (ENSCDRG00005001861)	SORCS2 (ENSCDRG00005001824)
Artiodactyla_b	ANCESTRAL SPECIES	30	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Pecora	ANCESTRAL SPECIES	15	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Percora_a	ANCESTRAL SPECIES	18	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Bovidae	ANCESTRAL SPECIES	18	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828.b	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Caprinae	ANCESTRAL SPECIES	13	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.k #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863.i #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828.b	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Rambouillet Sheep	MODERN SPECIES	22	NAT8L (ENSOARG00020023001) #7	ENSOARG00020022986	POLN (ENSOARG00020022890) #8	HAUS3 (ENSOARG00020022851) #10	MXD4 (ENSOARG00020022801) #11	ENSOARG00020022734 #12	ENSOARG00020022674 #12	CFAP99 (ENSOARG00020022601) #13	RNF4 (ENSOARG00020022503) #14	FAM193A (ENSOARG00020022278) #15	TNIP2 (ENSOARG00020022129) #16	SH3BP2 (ENSOARG00020021902) #17	ADD1 (ENSOARG00020021785) #18	ENSOARG00020021647 #19	NOP14 (ENSOARG00020021463) #20	GRK4 (ENSOARG00020021071) #22	HTT (ENSOARG00020020229) #23	MSANTD1 (ENSOARG00020020116) #24	RGS12 (ENSOARG00020019415) #25	HGFAC (ENSOARG00020019211) #26	DOK7 (ENSOARG00020019127) #27	LRPAP1 (ENSOARG00020019028) #28	ADRA2C (ENSOARG00020018999) #30	HMX1 (ENSOARG00020018963) #31	CPZ (ENSOARG00020018772) #32	ENSOARG00020018563	ACOX3 (ENSOARG00020018378) #35	HTRA3 (ENSOARG00020018235) #36	SH3TC1 (ENSOARG00020017981)	ABLIM2 (ENSOARG00020012027)	AFAP1 (ENSOARG00020011241)
Goat	MODERN SPECIES	25	NELFA (ENSCHIG00000018283)	C4orf48 (ENSCHIG00000002106)	NAT8L (ENSCHIG00000015781) #7	ENSCHIG00000007680	ENSCHIG00000014089 #10	MXD4 (ENSCHIG00000024119) #11	ZFYVE28 (ENSCHIG00000011539) #12	CFAP99 (ENSCHIG00000015798) #13	RNF4 (ENSCHIG00000003435) #14	FAM193A (ENSCHIG00000022591) #15	TNIP2 (ENSCHIG00000013890) #16	SH3BP2 (ENSCHIG00000011116) #17	ADD1 (ENSCHIG00000023797) #18	ENSCHIG00000014284 #19	NOP14 (ENSCHIG00000026702) #20	GRK4 (ENSCHIG00000021914) #22	ENSCHIG00000026634 #23	NKX1-1 (ENSCHIG00000025512)	UVSSA (ENSCHIG00000019552)	MAEA (ENSCHIG00000025892)	CTBP1 (ENSCHIG00000025244)	SPON2 (ENSCHIG00000018579)	ENSCHIG00000012949	IDUA (ENSCHIG00000025809)	SLC26A1 (ENSCHIG00000004233)	DGKQ (ENSCHIG00000022963)	CPLX1 (ENSCHIG00000012118)	PCGF3 (ENSCHIG00000017751)	SLC49A3 (ENSCHIG00000024366)	ENSCHIG00000013611	PDE6B (ENSCHIG00000020394)
Bovinae	ANCESTRAL SPECIES	15	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.t #25	ENSGT00940000159741.s #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828.b	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35
Bos	ANCESTRAL SPECIES	15	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.t #25	ENSGT00940000159741.s #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855.c #28	ENSGT01100000263828.b	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Bos_b	ANCESTRAL SPECIES	14	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.t #25	ENSGT00940000159741.s #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855.c #28	ENSGT01100000263828.b	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Hybrid Bos Indicus	MODERN SPECIES	25	NAT8L (ENSBIXG00005008838) #7	ENSBIXG00005006191	POLN (ENSBIXG00005000322) #8	ENSBIXG00005008965 #10	MXD4 (ENSBIXG00005008980) #11	ENSBIXG00005009002 #12	ENSBIXG00005009025 #12	CFAP99 (ENSBIXG00005009067) #13	RNF4 (ENSBIXG00005005461) #14	FAM193A (ENSBIXG00005009399) #15	TNIP2 (ENSBIXG00005009483) #16	SH3BP2 (ENSBIXG00005009588) #17	ADD1 (ENSBIXG00005009740) #18	ENSBIXG00005009806 #19	NOP14 (ENSBIXG00005009826) #20	GRK4 (ENSBIXG00005010030) #22	HTT (ENSBIXG00005006419) #23	MSANTD1 (ENSBIXG00005010285) #24	RGS12 (ENSBIXG00005010377) #25	DOK7 (ENSBIXG00005010412) #27	ENSBIXG00005010446 #28	ENSBIXG00005010466	ADRA2C (ENSBIXG00005010512) #30	HMX1 (ENSBIXG00005010552) #31	CPZ (ENSBIXG00005000693) #32	TRMT44 (ENSBIXG00005010670) #34	ACOX3 (ENSBIXG00005010819) #35	HTRA3 (ENSBIXG00005000973) #36	SH3TC1 (ENSBIXG00005000986)	ABLIM2 (ENSBIXG00005001027)	ENSBIXG00005001052
Cow	MODERN SPECIES	25	NELFA (ENSBTAG00000017921)	C6H4orf48 (ENSBTAG00000031395)	ENSBTAG00000053874 #7	POLN (ENSBTAG00000017296) #8	HAUS3 (ENSBTAG00000024787) #10	MXD4 (ENSBTAG00000015209) #11	ZFYVE28 (ENSBTAG00000006683) #12	CFAP99 (ENSBTAG00000054376) #13	RNF4 (ENSBTAG00000027453) #14	FAM193A (ENSBTAG00000009744) #15	TNIP2 (ENSBTAG00000015126)	SH3BP2 (ENSBTAG00000013996) #17	ADD1 (ENSBTAG00000021128) #18	MFSD10 (ENSBTAG00000021130) #19	NOP14 (ENSBTAG00000001504) #20	GRK4 (ENSBTAG00000001505) #22	ENSBTAG00000054535	HTT (ENSBTAG00000001506) #23	MSANTD1 (ENSBTAG00000003776) #24	ENSBTAG00000052058 #25	ENSBTAG00000052328 #25	ENSBTAG00000016714	HGFAC (ENSBTAG00000017335) #26	DOK7 (ENSBTAG00000009742) #27	LRPAP1 (ENSBTAG00000000073) #28	ADRA2C (ENSBTAG00000045994) #30	HMX1 (ENSBTAG00000031197) #31	CPZ (ENSBTAG00000014803) #32	TRMT44 (ENSBTAG00000004797) #34	ACOX3 (ENSBTAG00000004893) #35	HTRA3 (ENSBTAG00000047613) #36
Bos_a	ANCESTRAL SPECIES	61	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.s #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855.c #28	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT00940000164031
Domestic yak	MODERN SPECIES	25	ENSBGRG00000016908 #7	POLN (ENSBGRG00000016638) #8	ENSBGRG00000016598	HAUS3 (ENSBGRG00000016524) #10	ENSBGRG00000016319 #11	ENSBGRG00000016224 #12	ENSBGRG00000016089 #12	CFAP99 (ENSBGRG00000015852) #13	RNF4 (ENSBGRG00000015725) #14	FAM193A (ENSBGRG00000015247) #15	TNIP2 (ENSBGRG00000015105) #16	SH3BP2 (ENSBGRG00000014755) #17	ADD1 (ENSBGRG00000014564) #18	ENSBGRG00000014329 #19	NOP14 (ENSBGRG00000014192) #20	GRK4 (ENSBGRG00000013724) #22	HTT (ENSBGRG00000008977) #23	MSANTD1 (ENSBGRG00000008700) #24	ENSBGRG00000008554 #25	HGFAC (ENSBGRG00000008451) #26	DOK7 (ENSBGRG00000008376) #27	LRPAP1 (ENSBGRG00000008251) #28	ENSBGRG00000008212	HMX1 (ENSBGRG00000010610) #31	CPZ (ENSBGRG00000010490) #32	TRMT44 (ENSBGRG00000010431) #34	ACOX3 (ENSBGRG00000009913) #35	HTRA3 (ENSBGRG00000009786) #36	SH3TC1 (ENSBGRG00000009550)	ABLIM2 (ENSBGRG00000008458)	AFAP1 (ENSBGRG00000008121)
Wild yak	MODERN SPECIES	651						HAUS3 (ENSBMUG00000024829) #10	ENSBMUG00000024833 #11	ENSBMUG00000024846 #12	CFAP99 (ENSBMUG00000024856) #13	RNF4 (ENSBMUG00000024879) #14	FAM193A (ENSBMUG00000024969) #15	ENSBMUG00000024982	SH3BP2 (ENSBMUG00000024994) #17	ADD1 (ENSBMUG00000025041) #18	NOP14 (ENSBMUG00000025142) #20	GRK4 (ENSBMUG00000025302) #22	HTT (ENSBMUG00000026120) #23	MSANTD1 (ENSBMUG00000026206) #24
American bison	MODERN SPECIES	1988														ENSBBBG00000004613	NOP14 (ENSBBBG00000018601) #20	GRK4 (ENSBBBG00000018548) #22	ENSBBBG00000018450	ENSBBBG00000018444 #23	MSANTD1 (ENSBBBG00000018436) #24	ENSBBBG00000006965 #25	ENSBBBG00000018405 #25	HGFAC (ENSBBBG00000018371) #26	ENSBBBG00000018258 #27
Siberian musk deer	MODERN SPECIES	354	C4orf48 (ENSMMSG00000011837)	NAT8L (ENSMMSG00000011858) #7	POLN (ENSMMSG00000011904) #8	HAUS3 (ENSMMSG00000011973) #10	MXD4 (ENSMMSG00000012003) #11	ENSMMSG00000012038 #12	ENSMMSG00000012065 #12	CFAP99 (ENSMMSG00000012099) #13	RNF4 (ENSMMSG00000015797) #14	FAM193A (ENSMMSG00000015827) #15	TNIP2 (ENSMMSG00000015869) #16	SH3BP2 (ENSMMSG00000015976) #17	ADD1 (ENSMMSG00000016098) #18	ENSMMSG00000016223 #19	NOP14 (ENSMMSG00000016305) #20	GRK4 (ENSMMSG00000016395) #22	HTT (ENSMMSG00000016557) #23	MSANTD1 (ENSMMSG00000017137) #24	ENSMMSG00000017153 #25
Yarkand deer	MODERN SPECIES	29	NELFA (ENSCHYG00000025867)	NAT8L (ENSCHYG00000025851) #7	POLN (ENSCHYG00000025750) #8	HAUS3 (ENSCHYG00000025719) #10	ENSCHYG00000025702 #12	ENSCHYG00000025686	CFAP99 (ENSCHYG00000025667) #13	RNF4 (ENSCHYG00000025555) #14	ENSCHYG00000025523	FAM193A (ENSCHYG00000025484) #15	TNIP2 (ENSCHYG00000025444) #16	SH3BP2 (ENSCHYG00000025298) #17	ENSCHYG00000024729 #18	ENSCHYG00000024585 #19	NOP14 (ENSCHYG00000024534) #20	GRK4 (ENSCHYG00000024289) #22	HTT (ENSCHYG00000023889) #23	MSANTD1 (ENSCHYG00000023764) #24	RGS12 (ENSCHYG00000023405) #25	DOK7 (ENSCHYG00000023263) #27	ENSCHYG00000023167 #28	ENSCHYG00000023148 ##30	CPZ (ENSCHYG00000023015) #32	TRMT44 (ENSCHYG00000022951) #34	ACOX3 (ENSCHYG00000022776) #35	HTRA3 (ENSCHYG00000022643) #36	SH3TC1 (ENSCHYG00000022378)	ABLIM2 (ENSCHYG00000020931)	AFAP1 (ENSCHYG00000020461)	ENSCHYG00000020420	PSAPL1 (ENSCHYG00000020393)
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Odontoceti_a	ANCESTRAL SPECIES	22	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386.d #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386.d #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386.d #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Narwhal	MODERN SPECIES	307	C4orf48 (ENSMMNG00015008532)	ENSMMNG00015008518 #7	POLN (ENSMMNG00015008466) #8	HAUS3 (ENSMMNG00015008433) #10	MXD4 (ENSMMNG00015008416) #11	ENSMMNG00015008390 #12	ENSMMNG00015008379 #12	CFAP99 (ENSMMNG00015008357) #13	RNF4 (ENSMMNG00015008314) #14	FAM193A (ENSMMNG00015008181) #15	TNIP2 (ENSMMNG00015008095) #16	SH3BP2 (ENSMMNG00015008021) #17	ADD1 (ENSMMNG00015007965) #18	MFSD10 (ENSMMNG00015007848)	NOP14 (ENSMMNG00015007703) #20	ENSMMNG00015007674 #22	HTT (ENSMMNG00015007552) #23	MSANTD1 (ENSMMNG00015007459) #24	RGS12 (ENSMMNG00015007391) #25	HGFAC (ENSMMNG00015007314) #26	DOK7 (ENSMMNG00015007268) #27	LRPAP1 (ENSMMNG00015007240) #28	ADRA2C (ENSMMNG00015007215) #30	HMX1 (ENSMMNG00015007199) #31	CPZ (ENSMMNG00015007134) #32	TRMT44 (ENSMMNG00015007067) #34	ACOX3 (ENSMMNG00015006993) #35	HTRA3 (ENSMMNG00015006949) #36	SH3TC1 (ENSMMNG00015006864)	ABLIM2 (ENSMMNG00015006708)	AFAP1 (ENSMMNG00015006549)
Beluga whale	MODERN SPECIES	77	C4orf48 (ENSDLEG00000016453)	NAT8L (ENSDLEG00000016443) #7	POLN (ENSDLEG00000016047) #8	HAUS3 (ENSDLEG00000016006) #10	MXD4 (ENSDLEG00000015987) #11	ENSDLEG00000015973	ENSDLEG00000015957 #12	CFAP99 (ENSDLEG00000015790) #13	RNF4 (ENSDLEG00000015767) #14	FAM193A (ENSDLEG00000015632) #15	TNIP2 (ENSDLEG00000015610) #16	SH3BP2 (ENSDLEG00000015385) #17	ADD1 (ENSDLEG00000015327) #18	ENSDLEG00000015260 #19	NOP14 (ENSDLEG00000014931) #20	ENSDLEG00000014878 #22	ENSDLEG00000014875	HTT (ENSDLEG00000011397) #23	MSANTD1 (ENSDLEG00000011054) #24	RGS12 (ENSDLEG00000011012) #25	HGFAC (ENSDLEG00000019464) #26	DOK7 (ENSDLEG00000019424) #27	ENSDLEG00000019421 #28	ADRA2C (ENSDLEG00000019419) #30	HMX1 (ENSDLEG00000019416) #31	CPZ (ENSDLEG00000019412) #32	TRMT44 (ENSDLEG00000019402) #34	ACOX3 (ENSDLEG00000019342) #35	HTRA3 (ENSDLEG00000019321) #36	SH3TC1 (ENSDLEG00000019312)	ABLIM2 (ENSDLEG00000019228)
Sperm whale	MODERN SPECIES	18	NAT8L (ENSPCTG00005006259) #7	ENSPCTG00005006248	POLN (ENSPCTG00005006144) #8	HAUS3 (ENSPCTG00005006113) #10	ENSPCTG00005019696	MXD4 (ENSPCTG00005019644) #11	ENSPCTG00005019596 #12	ENSPCTG00005019514 #12	CFAP99 (ENSPCTG00005019388) #13	RNF4 (ENSPCTG00005019311) #14	FAM193A (ENSPCTG00005019111) #15	ENSPCTG00005018969	SH3BP2 (ENSPCTG00005018670) #17	ADD1 (ENSPCTG00005018610) #18	ENSPCTG00005018578 #20	ENSPCTG00005018521 #22	ENSPCTG00005018492	HTT (ENSPCTG00005017818) #23	MSANTD1 (ENSPCTG00005017696) #24	RGS12 (ENSPCTG00005017623) #25	HGFAC (ENSPCTG00005017292) #26	DOK7 (ENSPCTG00005017177) #27	LRPAP1 (ENSPCTG00005017137) #28	ADRA2C (ENSPCTG00005017090) #30	HMX1 (ENSPCTG00005017053) #31	CPZ (ENSPCTG00005016872) #32	TRMT44 (ENSPCTG00005016606) #34	ACOX3 (ENSPCTG00005016523) #35	ENSPCTG00005016460	ENSPCTG00005016281	AFAP1 (ENSPCTG00005015990)
Blue whale	MODERN SPECIES	16	NELFA (ENSBMSG00010009791)	C4orf48 (ENSBMSG00010009769)	NAT8L (ENSBMSG00010009755) #7	POLN (ENSBMSG00010009707) #8	HAUS3 (ENSBMSG00010009672) #10	MXD4 (ENSBMSG00010009650) #11	ENSBMSG00010009628 #12	CFAP99 (ENSBMSG00010009605) #13	RNF4 (ENSBMSG00010009582) #14	FAM193A (ENSBMSG00010009552) #15	TNIP2 (ENSBMSG00010009509) #16	SH3BP2 (ENSBMSG00010010433) #17	ADD1 (ENSBMSG00010010402) #18	ENSBMSG00010010354 #19	NOP14 (ENSBMSG00010010268) #20	GRK4 (ENSBMSG00010009184) #22	ENSBMSG00010009064	HTT (ENSBMSG00010009010) #23	MSANTD1 (ENSBMSG00010008984) #24	RGS12 (ENSBMSG00010008788) #25	HGFAC (ENSBMSG00010008732) #26	DOK7 (ENSBMSG00010008705) #27	LRPAP1 (ENSBMSG00010008696) #28	ADRA2C (ENSBMSG00010008691) #30	HMX1 (ENSBMSG00010008686) #31	CPZ (ENSBMSG00010008653) #32	TRMT44 (ENSBMSG00010008602) #34	ACOX3 (ENSBMSG00010008584) #35	HTRA3 (ENSBMSG00010008566) #36	SH3TC1 (ENSBMSG00010008538)	ABLIM2 (ENSBMSG00010007465)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Carnivora	ANCESTRAL SPECIES	5	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mustelinae	ANCESTRAL SPECIES	69	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
American mink	MODERN SPECIES	139	NAT8L (ENSNVIG00000000559) #7	POLN (ENSNVIG00000000575) #8	HAUS3 (ENSNVIG00000000614) #10	MXD4 (ENSNVIG00000000639) #11	ENSNVIG00000000648 #12	ENSNVIG00000000660 #12	CFAP99 (ENSNVIG00000000667) #13	RNF4 (ENSNVIG00000000683) #14	FAM193A (ENSNVIG00000000739) #15	TNIP2 (ENSNVIG00000000789) #16	SH3BP2 (ENSNVIG00000000831) #17	ENSNVIG00000000898	ADD1 (ENSNVIG00000000906) #18	MFSD10 (ENSNVIG00000001113)	NOP14 (ENSNVIG00000001159) #20	GRK4 (ENSNVIG00000001210) #22	HTT (ENSNVIG00000001469) #23	MSANTD1 (ENSNVIG00000005202) #24	ENSNVIG00000005214 #25	ENSNVIG00000005232	HGFAC (ENSNVIG00000005255) #26	ENSNVIG00000005312 #27	LRPAP1 (ENSNVIG00000005321) #28	HMX1 (ENSNVIG00000005343) #31	CPZ (ENSNVIG00000005357) #32	TRMT44 (ENSNVIG00000005444) #34	ACOX3 (ENSNVIG00000005462) #35	HTRA3 (ENSNVIG00000005532) #36	SH3TC1 (ENSNVIG00000005580)	ENSNVIG00000005654	ABLIM2 (ENSNVIG00000005686)
Ferret	MODERN SPECIES	334	NSD2 (ENSMPUG00000011036)	NELFA (ENSMPUG00000011031)	ENSMPUG00000011023	NAT8L (ENSMPUG00000011019) #7	HAUS3 (ENSMPUG00000011011) #10	MXD4 (ENSMPUG00000010989) #11	ZFYVE28 (ENSMPUG00000010981) #12	CFAP99 (ENSMPUG00000010977) #13	RNF4 (ENSMPUG00000010957) #14	FAM193A (ENSMPUG00000010949) #15	TNIP2 (ENSMPUG00000010947) #16	SH3BP2 (ENSMPUG00000010942) #17	ADD1 (ENSMPUG00000010933) #18	MFSD10 (ENSMPUG00000010909)	NOP14 (ENSMPUG00000010899) #20	GRK4 (ENSMPUG00000010706) #22	HTT (ENSMPUG00000010698) #23	MSANTD1 (ENSMPUG00000010693) #24	RGS12 (ENSMPUG00000010690) #25	HGFAC (ENSMPUG00000010585) #26	DOK7 (ENSMPUG00000010576) #27	LRPAP1 (ENSMPUG00000010570) #28	ENSMPUG00000010565 #31	CPZ (ENSMPUG00000010557) #32	TRMT44 (ENSMPUG00000010536) #34	ACOX3 (ENSMPUG00000010527) #35	HTRA3 (ENSMPUG00000010519) #36	SH3TC1 (ENSMPUG00000010511)	ABLIM2 (ENSMPUG00000010499)	AFAP1 (ENSMPUG00000010492)	SORCS2 (ENSMPUG00000010476)
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES	29	ENSGT00390000005342	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151.g #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a
Ursus	ANCESTRAL SPECIES	105	ENSGT00940000157429	ENSGT00390000005342	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00940000164052	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151.g #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a
Polar bear	MODERN SPECIES	111	ENSUMAG00000006404	NELFA (ENSUMAG00000006418)	ENSUMAG00000006510 #7	POLN (ENSUMAG00000006517) #8	HAUS3 (ENSUMAG00000006573) #10	ENSUMAG00000006575 #11	ZFYVE28 (ENSUMAG00000006582) #12	CFAP99 (ENSUMAG00000006604) #13	RNF4 (ENSUMAG00000006614) #14	FAM193A (ENSUMAG00000006616) #15	ENSUMAG00000006620	SH3BP2 (ENSUMAG00000006627) #17	ENSUMAG00000006661	ENSUMAG00000006673 #19	NOP14 (ENSUMAG00000006697) #20	GRK4 (ENSUMAG00000006953) #22	HTT (ENSUMAG00000008320) #23	MSANTD1 (ENSUMAG00000009714) #24	RGS12 (ENSUMAG00000009717) #25	HGFAC (ENSUMAG00000009730) #26	LRPAP1 (ENSUMAG00000009747) #28	CPZ (ENSUMAG00000009774) #32	TRMT44 (ENSUMAG00000009816) #34	ACOX3 (ENSUMAG00000009883) #35	HTRA3 (ENSUMAG00000010208) #36	SH3TC1 (ENSUMAG00000010239)	ABLIM2 (ENSUMAG00000010333)	AFAP1 (ENSUMAG00000010787)	SORCS2 (ENSUMAG00000010954)	GRPEL1 (ENSUMAG00000010977)	TADA2B (ENSUMAG00000010984)
American black bear	MODERN SPECIES	3479														MFSD10 (ENSUAMG00000016307)	NOP14 (ENSUAMG00000016302) #20	ENSUAMG00000016299 #22
Giant Panda	MODERN SPECIES	2	LETM1 (ENSAMEG00000014210)	NSD2 (ENSAMEG00000014221)	NELFA (ENSAMEG00000014240)	NAT8L (ENSAMEG00000014278) #7	POLN (ENSAMEG00000014290) #8	HAUS3 (ENSAMEG00000014332) #10	MXD4 (ENSAMEG00000014340) #11	ZFYVE28 (ENSAMEG00000014349) #12	CFAP99 (ENSAMEG00000028653) #13	FAM193A (ENSAMEG00000014383) #15	TNIP2 (ENSAMEG00000014405) #16	SH3BP2 (ENSAMEG00000014415) #17	ADD1 (ENSAMEG00000014449) #18	MFSD10 (ENSAMEG00000014523)	NOP14 (ENSAMEG00000014547) #20	GRK4 (ENSAMEG00000014586) #22	HTT (ENSAMEG00000014658) #23	MSANTD1 (ENSAMEG00000027262) #24	RGS12 (ENSAMEG00000014786) #25	HGFAC (ENSAMEG00000014815) #26	DOK7 (ENSAMEG00000024474) #27	ENSAMEG00000014853 #28	ENSAMEG00000014899 #32	TRMT44 (ENSAMEG00000014919) #34	ACOX3 (ENSAMEG00000014936) #35	HTRA3 (ENSAMEG00000014991) #36	SH3TC1 (ENSAMEG00000025685)	ABLIM2 (ENSAMEG00000015072)	AFAP1 (ENSAMEG00000006201)	SORCS2 (ENSAMEG00000006150)	GRPEL1 (ENSAMEG00000028793)
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000160151.h #22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000160151.h #22
American black bear	MODERN SPECIES	7960																ENSUAMG00000007909 #22
Canidae	ANCESTRAL SPECIES	21	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Red fox	MODERN SPECIES	1	ENSVVUG00000023827	NAT8L (ENSVVUG00000023829) #7	POLN (ENSVVUG00000023835) #8	HAUS3 (ENSVVUG00000023845) #10	MXD4 (ENSVVUG00000023848) #11	ZFYVE28 (ENSVVUG00000023859) #12	CFAP99 (ENSVVUG00000023861) #13	RNF4 (ENSVVUG00000023864) #14	ENSVVUG00000023867	FAM193A (ENSVVUG00000023873) #15	TNIP2 (ENSVVUG00000023886) #16	SH3BP2 (ENSVVUG00000023905) #17	ADD1 (ENSVVUG00000023924) #18	MFSD10 (ENSVVUG00000023927)	NOP14 (ENSVVUG00000023936) #20	GRK4 (ENSVVUG00000023942) #22	ENSVVUG00000023970	HTT (ENSVVUG00000024096) #23	MSANTD1 (ENSVVUG00000024948) #24	RGS12 (ENSVVUG00000024952) #25	HGFAC (ENSVVUG00000024961) #26	DOK7 (ENSVVUG00000025017) #27	LRPAP1 (ENSVVUG00000025019) #28	CPZ (ENSVVUG00000025033) #32	TRMT44 (ENSVVUG00000025044) #34	ACOX3 (ENSVVUG00000025052) #35	HTRA3 (ENSVVUG00000025060) #36	SH3TC1 (ENSVVUG00000025067)	ABLIM2 (ENSVVUG00000025103)	AFAP1 (ENSVVUG00000000026)	SORCS2 (ENSVVUG00000000041)
Canis_lupus	ANCESTRAL SPECIES	23	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00950000183198.c.a.b.a.a	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Dog	MODERN SPECIES	22	NELFA (ENSCAFG00845012841)	C3H4orf48 (ENSCAFG00845012789)	NAT8L (ENSCAFG00845012758) #7	POLN (ENSCAFG00845012682) #8	MXD4 (ENSCAFG00845012610) #11	ZFYVE28 (ENSCAFG00845012527) #12	CFAP99 (ENSCAFG00845012463) #13	RNF4 (ENSCAFG00845012388) #14	FAM193A (ENSCAFG00845012303) #15	TNIP2 (ENSCAFG00845012210) #16	SH3BP2 (ENSCAFG00845012142) #17	ADD1 (ENSCAFG00845012015) #18	MFSD10 (ENSCAFG00845011850)	NOP14 (ENSCAFG00845011751) #20	ENSCAFG00845011720	GRK4 (ENSCAFG00845011404) #22	HTT (ENSCAFG00845011174) #23	HTT (ENSCAFG00845011109) #24	HGFAC (ENSCAFG00845011005) #25	HGFAC (ENSCAFG00845010920) #26	ENSCAFG00845010871	HGFAC (ENSCAFG00845010777) #27	LRPAP1 (ENSCAFG00845010689) #28	ENSCAFG00845010654 #30	HMX1 (ENSCAFG00845010633) #31	CPZ (ENSCAFG00845010568) #32	TRMT44 (ENSCAFG00845010510) #34	ENSCAFG00845010480	ACOX3 (ENSCAFG00845010178) #35	HTRA3 (ENSCAFG00845010076) #36	SH3TC1 (ENSCAFG00845009957)
Dingo	MODERN SPECIES	138	C4orf48 (ENSCAFG00020012395)	NAT8L (ENSCAFG00020012398) #7	POLN (ENSCAFG00020012402) #8	HAUS3 (ENSCAFG00020012427) #10	MXD4 (ENSCAFG00020012430) #11	ZFYVE28 (ENSCAFG00020012447) #12	CFAP99 (ENSCAFG00020012449) #13	RNF4 (ENSCAFG00020012490) #14	FAM193A (ENSCAFG00020012546) #15	TNIP2 (ENSCAFG00020012703) #16	SH3BP2 (ENSCAFG00020012726) #17	ADD1 (ENSCAFG00020012740) #18	MFSD10 (ENSCAFG00020012765)	NOP14 (ENSCAFG00020012768) #20	ENSCAFG00020012776	ENSCAFG00020012780 #22	ENSCAFG00020012783	HTT (ENSCAFG00020012904) #23	MSANTD1 (ENSCAFG00020014619) #24	RGS12 (ENSCAFG00020014622) #25	HGFAC (ENSCAFG00020014624) #26	DOK7 (ENSCAFG00020014626) #27	LRPAP1 (ENSCAFG00020014629) #28	ADRA2C (ENSCAFG00020014633) #30	HMX1 (ENSCAFG00020014639) #31	CPZ (ENSCAFG00020014642) #32	TRMT44 (ENSCAFG00020014653) #34	ENSCAFG00020014681	ACOX3 (ENSCAFG00020014686) #35	HTRA3 (ENSCAFG00020014735) #36	SH3TC1 (ENSCAFG00020014736)
Felidae	ANCESTRAL SPECIES	4	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00950000183087.A.a.a.b.p	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Panthera	ANCESTRAL SPECIES	5	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00950000183087.A.a.a.b.p	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Tiger	MODERN SPECIES	303	C4orf48 (ENSPTIG00000016138)	POLN (ENSPTIG00000011746) #8	HAUS3 (ENSPTIG00000011163) #10	ENSPTIG00000010627 #12	ENSPTIG00000009881 #12	CFAP99 (ENSPTIG00000008222) #13	RNF4 (ENSPTIG00000019861) #14	FAM193A (ENSPTIG00000015747) #15	TNIP2 (ENSPTIG00000015248) #16	SH3BP2 (ENSPTIG00000011454) #17	ENSPTIG00000011214	ADD1 (ENSPTIG00000014981) #18	MFSD10 (ENSPTIG00000012030)	NOP14 (ENSPTIG00000007085) #20	ENSPTIG00000011764	GRK4 (ENSPTIG00000007372) #22	HTT (ENSPTIG00000016947) #23	RGS12 (ENSPTIG00000013667) #25	HGFAC (ENSPTIG00000011703) #26	ENSPTIG00000009272 #28
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00390000011904 #10	ENSGT00910000148326	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00950000183087.A.a.a.b.p	ENSGT00940000158581 #18	ENSGT00940000164295	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
leopard	MODERN SPECIES	25	ENSPPRG00000004633 #7	HAUS3 (ENSPPRG00000007568) #10	MXD4 (ENSPPRG00000009897) #11	ENSPPRG00000012352 #12	CFAP99 (ENSPPRG00000013633) #13	RNF4 (ENSPPRG00000020972) #14	ENSPPRG00000022001	FAM193A (ENSPPRG00000023349) #15	TNIP2 (ENSPPRG00000022784) #16	SH3BP2 (ENSPPRG00000000297) #17	ENSPPRG00000000360	ADD1 (ENSPPRG00000009526) #18	MFSD10 (ENSPPRG00000010726)	NOP14 (ENSPPRG00000012848) #20	ENSPPRG00000001525	GRK4 (ENSPPRG00000004398) #22	HTT (ENSPPRG00000008717) #23	MSANTD1 (ENSPPRG00000010491) #24	RGS12 (ENSPPRG00000014281) #25	HGFAC (ENSPPRG00000020547) #26	DOK7 (ENSPPRG00000021690) #27	LRPAP1 (ENSPPRG00000022560) #28	ADRA2C (ENSPPRG00000023307) #30	HMX1 (ENSPPRG00000023236) #31	CPZ (ENSPPRG00000000157) #32	TRMT44 (ENSPPRG00000001613) #34	ACOX3 (ENSPPRG00000003521) #35	HTRA3 (ENSPPRG00000005071) #36	SH3TC1 (ENSPPRG00000005952)	ABLIM2 (ENSPPRG00000019420)	AFAP1 (ENSPPRG00000002919)
lion	MODERN SPECIES	4	ENSPLOG00000004384	MXD4 (ENSPLOG00000004376) #11	ENSPLOG00000004365 #12	ENSPLOG00000004349 #12	CFAP99 (ENSPLOG00000004314) #13	RNF4 (ENSPLOG00000004275) #14	ENSPLOG00000004250	FAM193A (ENSPLOG00000004221) #15	ENSPLOG00000004190	SH3BP2 (ENSPLOG00000004166) #17	ENSPLOG00000004143	ADD1 (ENSPLOG00000004119) #18	MFSD10 (ENSPLOG00000004084)	NOP14 (ENSPLOG00000003997) #20	ENSPLOG00000003978	GRK4 (ENSPLOG00000003900) #22	HTT (ENSPLOG00000003788) #23	MSANTD1 (ENSPLOG00000003674) #24	RGS12 (ENSPLOG00000003568) #25	HGFAC (ENSPLOG00000003505) #26	DOK7 (ENSPLOG00000003465) #27	LRPAP1 (ENSPLOG00000003425) #28	ADRA2C (ENSPLOG00000003403) #30	CPZ (ENSPLOG00000003386) #32	TRMT44 (ENSPLOG00000003365) #34	ACOX3 (ENSPLOG00000003334) #35	HTRA3 (ENSPLOG00000003274) #36	SH3TC1 (ENSPLOG00000003184)	ABLIM2 (ENSPLOG00000002684)	AFAP1 (ENSPLOG00000002258)	GRPEL1 (ENSPLOG00000002205)
Cat	MODERN SPECIES	235	CB1H4orf48 (ENSFCAG00000033658)	NAT8L (ENSFCAG00000044588) #7	HAUS3 (ENSFCAG00000027704) #10	MXD4 (ENSFCAG00000042853) #11	ZFYVE28 (ENSFCAG00000052700) #12	CFAP99 (ENSFCAG00000037967) #13	RNF4 (ENSFCAG00000004051) #14	FAM193A (ENSFCAG00000004056) #15	TNIP2 (ENSFCAG00000004062) #16	ENSFCAG00000047433	SH3BP2 (ENSFCAG00000025020) #17	ENSFCAG00000028314	ADD1 (ENSFCAG00000024752) #18	MFSD10 (ENSFCAG00000004599)	NOP14 (ENSFCAG00000004601) #20	GRK4 (ENSFCAG00000023067) #22	HTT (ENSFCAG00000004607) #23	MSANTD1 (ENSFCAG00000004611) #24	RGS12 (ENSFCAG00000004612) #25	HGFAC (ENSFCAG00000012646) #26	DOK7 (ENSFCAG00000012716) #27	LRPAP1 (ENSFCAG00000028599) #28	ENSFCAG00000047516	ADRA2C (ENSFCAG00000023309) #30	HMX1 (ENSFCAG00000045042) #31	CPZ (ENSFCAG00000015298) #32	TRMT44 (ENSFCAG00000015295) #34	ACOX3 (ENSFCAG00000015294) #35	HTRA3 (ENSFCAG00000015293) #36	SH3TC1 (ENSFCAG00000046348)	ABLIM2 (ENSFCAG00000015291)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217.ac #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217.ac #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217.ac #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Greater horseshoe bat	MODERN SPECIES	23	C4orf48 (ENSRFEG00010010259)	NAT8L (ENSRFEG00010010189) #7	POLN (ENSRFEG00010009949) #8	HAUS3 (ENSRFEG00010009879) #10	MXD4 (ENSRFEG00010009834) #11	ZFYVE28 (ENSRFEG00010009726) #12	CFAP99 (ENSRFEG00010009563) #13	RNF4 (ENSRFEG00010009477) #14	FAM193A (ENSRFEG00010009206) #15	TNIP2 (ENSRFEG00010009107) #16	SH3BP2 (ENSRFEG00010008972) #17	ADD1 (ENSRFEG00010008824) #18	ENSRFEG00010008736 #19	NOP14 (ENSRFEG00010008647) #20	ENSRFEG00010008607	GRK4 (ENSRFEG00010008411) #22	HTT (ENSRFEG00010007650) #23	MSANTD1 (ENSRFEG00010007510) #24	RGS12 (ENSRFEG00010007497) #25	HGFAC (ENSRFEG00010007433) #26	DOK7 (ENSRFEG00010007323) #27	LRPAP1 (ENSRFEG00010007276) #28	ADRA2C (ENSRFEG00010007225) #30	HMX1 (ENSRFEG00010007198) #31	CPZ (ENSRFEG00010006985) #32	TRMT44 (ENSRFEG00010006921) #34	ACOX3 (ENSRFEG00010006855) #35	HTRA3 (ENSRFEG00010006798) #36	SH3TC1 (ENSRFEG00010006738)	ABLIM2 (ENSRFEG00010006470)	AFAP1 (ENSRFEG00010006280)
Microbat	MODERN SPECIES	1473						POLN (ENSMLUG00000007281) #8	HAUS3 (ENSMLUG00000028862) #10	ENSMLUG00000028940 #11	RNF4 (ENSMLUG00000005969) #14	ENSMLUG00000002232 #15	ENSMLUG00000008919	SH3BP2 (ENSMLUG00000015844) #17	ADD1 (ENSMLUG00000005321) #18	ENSMLUG00000027483 #19	NOP14 (ENSMLUG00000010861) #20	GRK4 (ENSMLUG00000005068) #22	HTT (ENSMLUG00000003880) #23
Megabat	MODERN SPECIES	3523													ADD1 (ENSPVAG00000011300) #18	ENSPVAG00000011302 #19	NOP14 (ENSPVAG00000011306) #20	GRK4 (ENSPVAG00000011311) #22	HTT (ENSPVAG00000011314) #23
Equus	ANCESTRAL SPECIES	12	ENSGT00940000157429	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217.ac #12	ENSGT00500000045231 #13	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Donkey	MODERN SPECIES	22	HAUS3 (ENSEASG00005022762) #10	POLN (ENSEASG00005022744) #8	MXD4 (ENSEASG00005034001) #11	ENSEASG00005028915 #12	ENSEASG00005022764 #12	CFAP99 (ENSEASG00005022766) #13	ENSEASG00005036723	RNF4 (ENSEASG00005031929) #14	ENSEASG00005035809	FAM193A (ENSEASG00005022783) #15	TNIP2 (ENSEASG00005000121) #16	SH3BP2 (ENSEASG00005000171) #17	ADD1 (ENSEASG00005000389) #18	ENSEASG00005001678 #19	NOP14 (ENSEASG00005001906) #20	GRK4 (ENSEASG00005002174) #22	HTT (ENSEASG00005003073) #23	MSANTD1 (ENSEASG00005004110) #24	ENSEASG00005025149 #25	ENSEASG00005004164 #25	HGFAC (ENSEASG00005004371) #26	DOK7 (ENSEASG00005004429) #27	LRPAP1 (ENSEASG00005004447) #28	ENSEASG00005033997 #30	ENSEASG00005004463 #31	ENSEASG00005032469	ENSEASG00005031500	CPZ (ENSEASG00005004468) #32	TRMT44 (ENSEASG00005004478) #34	ACOX3 (ENSEASG00005004493) #35	HTRA3 (ENSEASG00005004509) #36
Horse	MODERN SPECIES	22	NELFA (ENSECAG00000010240)	NAT8L (ENSECAG00000009867) #7	HAUS3 (ENSECAG00000004593) #10	POLN (ENSECAG00000007802) #8	MXD4 (ENSECAG00000029077) #11	ENSECAG00000058211 #12	ZFYVE28 (ENSECAG00000024955) #12	CFAP99 (ENSECAG00000029686) #13	ENSECAG00000060379	FAM193A (ENSECAG00000024501) #15	TNIP2 (ENSECAG00000024134) #16	SH3BP2 (ENSECAG00000021841) #17	ADD1 (ENSECAG00000013136) #18	MFSD10 (ENSECAG00000010491) #19	NOP14 (ENSECAG00000023951) #20	GRK4 (ENSECAG00000018979) #22	HTT (ENSECAG00000008684) #23	MSANTD1 (ENSECAG00000008424) #24	RGS12 (ENSECAG00000019746) #25	HGFAC (ENSECAG00000019001) #26	DOK7 (ENSECAG00000017927) #27	LRPAP1 (ENSECAG00000014825) #28	HMX1 (ENSECAG00000032622) #31	ENSECAG00000057404	ENSECAG00000036844	CPZ (ENSECAG00000012887) #32	TRMT44 (ENSECAG00000011958) #34	ACOX3 (ENSECAG00000008588) #35	HTRA3 (ENSECAG00000000727) #36	SH3TC1 (ENSECAG00000020879)	ABLIM2 (ENSECAG00000016485)
Atlantogenata	ANCESTRAL SPECIES	131											ENSGT00940000164052	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a.m	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a
Afrotheria	ANCESTRAL SPECIES	171												ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a.m	ENSGT00950000183067.a.a
Afrotheria_a	ANCESTRAL SPECIES	173												ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391 #32	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a.m	ENSGT00950000183067.a.a
Elephant	MODERN SPECIES	164	NELFA (ENSLAFG00000008168)	C4orf48 (ENSLAFG00000029945)	NAT8L (ENSLAFG00000030733) #7	POLN (ENSLAFG00000014515) #8	HAUS3 (ENSLAFG00000020863) #10	MXD4 (ENSLAFG00000026709) #11	ENSLAFG00000001042 #12	RNF4 (ENSLAFG00000007382) #14	ENSLAFG00000004078 #15	ENSLAFG00000028553 #15	ENSLAFG00000027379	SH3BP2 (ENSLAFG00000016902) #17	ADD1 (ENSLAFG00000028230) #18	ENSLAFG00000029996 #19	NOP14 (ENSLAFG00000017989) #20	GRK4 (ENSLAFG00000015019) #22	HTT (ENSLAFG00000013021) #23	MSANTD1 (ENSLAFG00000032063) #24	RGS12 (ENSLAFG00000013706) #25	DOK7 (ENSLAFG00000020555) #27	LRPAP1 (ENSLAFG00000001667) #28	ENSLAFG00000032054 #32	TRMT44 (ENSLAFG00000005046) #34	ACOX3 (ENSLAFG00000031250) #35	HTRA3 (ENSLAFG00000001907) #36	SH3TC1 (ENSLAFG00000016068)	ABLIM2 (ENSLAFG00000031132)	AFAP1 (ENSLAFG00000028754)
Hyrax	MODERN SPECIES	1918																GRK4 (ENSPCAG00000016284) #22
Tenrec	MODERN SPECIES	2362																GRK4 (ENSETEG00000018959) #22
Xenarthra	ANCESTRAL SPECIES	643														ENSGT00940000158581 #18	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000004855 #28
Armadillo	MODERN SPECIES	4233													ENSDNOG00000039809	ADD1 (ENSDNOG00000037787) #18	ENSDNOG00000040831 #20	GRK4 (ENSDNOG00000018613) #22	HTT (ENSDNOG00000019218) #23	MSANTD1 (ENSDNOG00000024044) #24	ENSDNOG00000035879	RGS12 (ENSDNOG00000043466) #25	ENSDNOG00000023941 #26	ENSDNOG00000041961	LRPAP1 (ENSDNOG00000045324) #28
Sloth	MODERN SPECIES	2138																GRK4 (ENSCHOG00000001558) #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00390000005342.l.a	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000157429	ENSGT00390000005342.l.a	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000157429	ENSGT00390000005342.l.a	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.A
koala	MODERN SPECIES	43	ENSPCIG00000037120	NAT8L (ENSPCIG00000002186) #7	ENSPCIG00000028500	POLN (ENSPCIG00000028499) #8	HAUS3 (ENSPCIG00000032540) #10	MXD4 (ENSPCIG00000028502) #11	ZFYVE28 (ENSPCIG00000028505) #12	ENSPCIG00000028507 #13	RNF4 (ENSPCIG00000028508) #14	FAM193A (ENSPCIG00000028509) #15	TNIP2 (ENSPCIG00000001126) #16	SH3BP2 (ENSPCIG00000028511) #17	ADD1 (ENSPCIG00000028514) #18	ENSPCIG00000028515 #19	NOP14 (ENSPCIG00000028518) #20	GRK4 (ENSPCIG00000028521) #22	HTT (ENSPCIG00000028525) #23	MSANTD1 (ENSPCIG00000028526) #24	RGS12 (ENSPCIG00000028527) #25	HGFAC (ENSPCIG00000028528) #26	DOK7 (ENSPCIG00000028529) #27	LRPAP1 (ENSPCIG00000028530) #28	ADRA2C (ENSPCIG00000014482) #30	ENSPCIG00000023618 #31	ENSPCIG00000023620	CPZ (ENSPCIG00000023623) #32	ENSPCIG00000023628 #33	TRMT44 (ENSPCIG00000023633) #34	ACOX3 (ENSPCIG00000023639) #35	HTRA3 (ENSPCIG00000023654) #36	SH3TC1 (ENSPCIG00000023664)
Common wonbat	MODERN SPECIES	1054	NSD2 (ENSVURG00010021411)	ENSVURG00010021490	ENSVURG00010021495	ENSVURG00010021502 #7	HAUS3 (ENSVURG00010021506) #10	MXD4 (ENSVURG00010021518) #11	ENSVURG00010021528 #12	ENSVURG00010021535 #13	RNF4 (ENSVURG00010021546) #14	FAM193A (ENSVURG00010021562) #15	TNIP2 (ENSVURG00010021586) #16	SH3BP2 (ENSVURG00010021621) #17	ADD1 (ENSVURG00010021640) #18	ENSVURG00010021651 #19	NOP14 (ENSVURG00010021659) #20	GRK4 (ENSVURG00010021670) #22	HTT (ENSVURG00010021701) #23	MSANTD1 (ENSVURG00010021763) #24	RGS12 (ENSVURG00010021768) #25	HGFAC (ENSVURG00010021775) #26	DOK7 (ENSVURG00010021778) #27	LRPAP1 (ENSVURG00010021783) #28	ADRA2C (ENSVURG00010021786) #30	HMX1 (ENSVURG00010021792) #31	CPZ (ENSVURG00010021800) #32	GPR78 (ENSVURG00010021802) #33	TRMT44 (ENSVURG00010021809) #34	ACOX3 (ENSVURG00010021844) #35	HTRA3 (ENSVURG00010021852) #36	SH3TC1 (ENSVURG00010021859)	ABLIM2 (ENSVURG00010021886)
Wallaby	MODERN SPECIES	3255																ENSMEUG00000014217 #22
Tasmanian devil	MODERN SPECIES	5	NSD2 (ENSSHAG00000006750)	NELFA (ENSSHAG00000006075)	ENSSHAG00000023580	NAT8L (ENSSHAG00000003078) #7	ENSSHAG00000012083 #10	ENSSHAG00000028807 #11	ZFYVE28 (ENSSHAG00000010322) #12	ENSSHAG00000026056 #13	FAM193A (ENSSHAG00000004929) #15	TNIP2 (ENSSHAG00000003911) #16	SH3BP2 (ENSSHAG00000001849) #17	ENSSHAG00000021157	ADD1 (ENSSHAG00000011634) #18	ENSSHAG00000011412 #19	NOP14 (ENSSHAG00000010914) #20	GRK4 (ENSSHAG00000010073) #22	HTT (ENSSHAG00000008126) #23	MSANTD1 (ENSSHAG00000027187) #24	RGS12 (ENSSHAG00000002156) #25	HGFAC (ENSSHAG00000001769) #26	DOK7 (ENSSHAG00000029804) #27	LRPAP1 (ENSSHAG00000014590) #28	ENSSHAG00000021069 #30	ENSSHAG00000009037 #31	ENSSHAG00000024016	CPZ (ENSSHAG00000002362) #32	GPR78 (ENSSHAG00000031228) #33	TRMT44 (ENSSHAG00000027526) #34	ENSSHAG00000027734 #35	ENSSHAG00000016195 #35	HTRA3 (ENSSHAG00000015806) #36
Opossum	MODERN SPECIES	4	NELFA (ENSMODG00000004110)	ENSMODG00000024702	NAT8L (ENSMODG00000004088) #7	POLN (ENSMODG00000004074) #8	MXD4 (ENSMODG00000004033) #11	ZFYVE28 (ENSMODG00000004017) #12	ENSMODG00000050224 #13	RNF4 (ENSMODG00000003938) #14	FAM193A (ENSMODG00000003925) #15	TNIP2 (ENSMODG00000003892) #16	SH3BP2 (ENSMODG00000003843) #17	ADD1 (ENSMODG00000003815) #18	ENSMODG00000003757 #19	NOP14 (ENSMODG00000003736) #20	ENSMODG00000051167	GRK4 (ENSMODG00000003693) #22	HTT (ENSMODG00000003615) #23	MSANTD1 (ENSMODG00000003508) #24	ENSMODG00000003502 #25	ENSMODG00000049174 #25	HGFAC (ENSMODG00000003485) #26	DOK7 (ENSMODG00000003469) #27	LRPAP1 (ENSMODG00000003461) #28	ADRA2C (ENSMODG00000003290) #30	ENSMODG00000003283 #31	ENSMODG00000043158	CPZ (ENSMODG00000003209) #32	GPR78 (ENSMODG00000003175) #33	ENSMODG00000039676	ACOX3 (ENSMODG00000003150) #35	HTRA3 (ENSMODG00000003113) #36
Platypus	MODERN SPECIES	15	LETM1 (ENSOANG00000005820)	NSD2 (ENSOANG00000014321)	NELFA (ENSOANG00000044855)	NAT8L (ENSOANG00000039001) #7	MXD4 (ENSOANG00000043646) #11	ENSOANG00000041013	ZFYVE28 (ENSOANG00000039812) #12	ENSOANG00000049568 #13	RNF4 (ENSOANG00000045071) #14	FAM193A (ENSOANG00000015175) #15	ENSOANG00000029063 #16	SH3BP2 (ENSOANG00000011388) #17	ADD1 (ENSOANG00000001783) #18	ENSOANG00000001782 #19	NOP14 (ENSOANG00000005809) #20	GRK4 (ENSOANG00000021583) #22	HTT (ENSOANG00000041824) #23	MSANTD1 (ENSOANG00000041153) #24	RGS12 (ENSOANG00000015036) #25	HGFAC (ENSOANG00000048673) #26	DOK7 (ENSOANG00000040522) #27	LRPAP1 (ENSOANG00000043402) #28	ADRA2C (ENSOANG00000047040) #30	ENSOANG00000044173	CPZ (ENSOANG00000048753) #32	GPR78 (ENSOANG00000050536) #33	ENSOANG00000020584 #34	ENSOANG00000037473 #35	HTRA3 (ENSOANG00000038381) #36	ENSOANG00000039780	ABLIM2 (ENSOANG00000039436)
Sauria	ANCESTRAL SPECIES	6	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Archosauria	ANCESTRAL SPECIES	1	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Aves	ANCESTRAL SPECIES	3	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Neognathae	ANCESTRAL SPECIES	5	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263482.B.a.d	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Great tit	MODERN SPECIES	23	NSD2 (ENSPMJG00000016750)	ENSPMJG00000016749	NAT8L (ENSPMJG00000016748) #7	POLN (ENSPMJG00000016747) #8	HAUS3 (ENSPMJG00000016746) #10	MXD4 (ENSPMJG00000016745) #11	ZFYVE28 (ENSPMJG00000016738) #12	CFAP99 (ENSPMJG00000016737) #13	RNF4 (ENSPMJG00000016736) #14	FAM193A (ENSPMJG00000016722) #15	TNIP2 (ENSPMJG00000016720) #16	SH3BP2 (ENSPMJG00000016718) #17	ADD1 (ENSPMJG00000016716) #18	ENSPMJG00000016715 #19	NOP14 (ENSPMJG00000016714) #20	GRK4 (ENSPMJG00000016713) #22	HTT (ENSPMJG00000016451) #23	MSANTD1 (ENSPMJG00000016450) #24	RGS12 (ENSPMJG00000016449) #25	HGFAC (ENSPMJG00000016448) #26	DOK7 (ENSPMJG00000016447) #27	LRPAP1 (ENSPMJG00000016446) #28	ENSPMJG00000016445	ADRA2C (ENSPMJG00000016442) #30	ENSPMJG00000016441	ENSPMJG00000016440	CPZ (ENSPMJG00000016439) #32	GPR78 (ENSPMJG00000016438) #33	TRMT44 (ENSPMJG00000016436) #34	ACOX3 (ENSPMJG00000016435) #35	HTRA3 (ENSPMJG00000016434) #36
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581.a #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263482.B.a.d	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Flycatcher	MODERN SPECIES	22	ENSFALG00000023813	C4orf48 (ENSFALG00000009893)	NAT8L (ENSFALG00000009890) #7	POLN (ENSFALG00000009880) #8	HAUS3 (ENSFALG00000009872) #10	MXD4 (ENSFALG00000028128) #11	ZFYVE28 (ENSFALG00000009861) #12	CFAP99 (ENSFALG00000009853) #13	RNF4 (ENSFALG00000028670) #14	FAM193A (ENSFALG00000009833) #15	TNIP2 (ENSFALG00000009830) #16	SH3BP2 (ENSFALG00000009826) #17	ADD1 (ENSFALG00000009811) #18	ENSFALG00000009804 #19	NOP14 (ENSFALG00000009800) #20	GRK4 (ENSFALG00000009786) #22	HTT (ENSFALG00000009741) #23	MSANTD1 (ENSFALG00000009729) #24	RGS12 (ENSFALG00000009727) #25	HGFAC (ENSFALG00000009723) #26	DOK7 (ENSFALG00000009722) #27	LRPAP1 (ENSFALG00000009713) #28	ENSFALG00000009708	ADRA2C (ENSFALG00000014832) #30	HMX1 (ENSFALG00000009706) #31	ENSFALG00000024180	CPZ (ENSFALG00000009697) #32	GPR78 (ENSFALG00000009692) #33	TRMT44 (ENSFALG00000009686) #34	ACOX3 (ENSFALG00000009684) #35	HTRA3 (ENSFALG00000009680) #36
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581.a #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263482.B.a.d	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581.a #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263482.B.a.d	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Zebra finch	MODERN SPECIES	25	NELFA (ENSTGUG00000010548)	ENSTGUG00000022999	C4orf48 (ENSTGUG00000010545)	NAT8L (ENSTGUG00000027909) #7	POLN (ENSTGUG00000010536) #8	MXD4 (ENSTGUG00000010530) #11	ZFYVE28 (ENSTGUG00000010524) #12	CFAP99 (ENSTGUG00000010519) #13	RNF4 (ENSTGUG00000027704) #14	FAM193A (ENSTGUG00000010507) #15	TNIP2 (ENSTGUG00000010505) #16	SH3BP2 (ENSTGUG00000010489) #17	ADD1 (ENSTGUG00000010471) #18	ENSTGUG00000010470 #19	NOP14 (ENSTGUG00000010455) #20	GRK4 (ENSTGUG00000010430) #22	HTT (ENSTGUG00000010399) #23	MSANTD1 (ENSTGUG00000010397) #24	RGS12 (ENSTGUG00000010365) #25	HGFAC (ENSTGUG00000010360) #26	DOK7 (ENSTGUG00000010345) #27	LRPAP1 (ENSTGUG00000010329) #28	ENSTGUG00000010325	ADRA2C (ENSTGUG00000010321) #30	ENSTGUG00000028917	ENSTGUG00000010318	CPZ (ENSTGUG00000010292) #32	GPR78 (ENSTGUG00000010289) #33	TRMT44 (ENSTGUG00000010279) #34	ACOX3 (ENSTGUG00000010262) #35	HTRA3 (ENSTGUG00000010252) #36
Common canary	MODERN SPECIES	2	NELFA (ENSSCAG00000015311)	ENSSCAG00000015313	C4orf48 (ENSSCAG00000015314)	NAT8L (ENSSCAG00000015317) #7	HAUS3 (ENSSCAG00000015319) #10	MXD4 (ENSSCAG00000015320) #11	ZFYVE28 (ENSSCAG00000015322) #12	CFAP99 (ENSSCAG00000015324) #13	RNF4 (ENSSCAG00000015329) #14	FAM193A (ENSSCAG00000015363) #15	TNIP2 (ENSSCAG00000015434) #16	SH3BP2 (ENSSCAG00000015437) #17	ADD1 (ENSSCAG00000015448) #18	ENSSCAG00000015458 #19	NOP14 (ENSSCAG00000015461) #20	GRK4 (ENSSCAG00000015464) #22	HTT (ENSSCAG00000015474) #23	MSANTD1 (ENSSCAG00000015491) #24	RGS12 (ENSSCAG00000015496) #25	HGFAC (ENSSCAG00000015504) #26	DOK7 (ENSSCAG00000015507) #27	LRPAP1 (ENSSCAG00000015510) #28	ENSSCAG00000015522	ADRA2C (ENSSCAG00000015532) #30	ENSSCAG00000015536	CPZ (ENSSCAG00000015543) #32	GPR78 (ENSSCAG00000015546) #33	TRMT44 (ENSSCAG00000015556) #34	ACOX3 (ENSSCAG00000015562) #35	HTRA3 (ENSSCAG00000015569) #36	ENSSCAG00000015579
Medium ground finch	MODERN SPECIES	75	NELFA (ENSGFOG00000008173)	ENSGFOG00000008178	C4orf48 (ENSGFOG00000008181)	NAT8L (ENSGFOG00000008186) #7	HAUS3 (ENSGFOG00000008190) #10	MXD4 (ENSGFOG00000008198) #11	ZFYVE28 (ENSGFOG00000008209) #12	CFAP99 (ENSGFOG00000008238) #13	RNF4 (ENSGFOG00000008275) #14	FAM193A (ENSGFOG00000008287) #15	TNIP2 (ENSGFOG00000008314) #16	SH3BP2 (ENSGFOG00000008338) #17	ENSGFOG00000008355 #18	ENSGFOG00000008390 #19	NOP14 (ENSGFOG00000008399) #20	GRK4 (ENSGFOG00000008414) #22	HTT (ENSGFOG00000000476) #23	MSANTD1 (ENSGFOG00000000975) #24	RGS12 (ENSGFOG00000000986) #25	HGFAC (ENSGFOG00000001002) #26	DOK7 (ENSGFOG00000001026) #27	LRPAP1 (ENSGFOG00000001041) #28	ENSGFOG00000001062	ADRA2C (ENSGFOG00000001073) #30	CPZ (ENSGFOG00000001084) #32	GPR78 (ENSGFOG00000001107) #33	TRMT44 (ENSGFOG00000001125) #34	ACOX3 (ENSGFOG00000001152) #35	HTRA3 (ENSGFOG00000001170) #36	ENSGFOG00000001207	ABLIM2 (ENSGFOG00000001473)
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318.l.a #14	ENSGT00390000010318.l.b #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a
Kakapo	MODERN SPECIES	24	HAUS3 (ENSSHBG00005014273) #10	MXD4 (ENSSHBG00005014280) #11	ENSSHBG00005014294 #12	ENSSHBG00005014299 #12	CFAP99 (ENSSHBG00005014309) #13	RNF4 (ENSSHBG00005014316) #14	ENSSHBG00005014326 #14	ENSSHBG00005014338 #14	ENSSHBG00005014358 #14	FAM193A (ENSSHBG00005014440) #15	TNIP2 (ENSSHBG00005015999) #16	SH3BP2 (ENSSHBG00005016003) #17	ADD1 (ENSSHBG00005016015) #18	ENSSHBG00005016054 #19	NOP14 (ENSSHBG00005016060) #20	GRK4 (ENSSHBG00005016074) #22	HTT (ENSSHBG00005016122) #23	MSANTD1 (ENSSHBG00005016239) #24	RGS12 (ENSSHBG00005016307) #25	ENSSHBG00005016933 #26	ENSSHBG00005016937 #26	DOK7 (ENSSHBG00005016947) #27	LRPAP1 (ENSSHBG00005016957) #28	ADRA2C (ENSSHBG00005016961) #30	ENSSHBG00005016964	ENSSHBG00005016970	CPZ (ENSSHBG00005016978) #32	GPR78 (ENSSHBG00005016989) #33	TRMT44 (ENSSHBG00005016993) #34	ACOX3 (ENSSHBG00005017015) #35	HTRA3 (ENSSHBG00005017129) #36
Golden eagle	MODERN SPECIES		C4orf48 (ENSACCG00020000108)	ENSACCG00020000109 #7	ENSACCG00020000110 #7	HAUS3 (ENSACCG00020000111) #10	MXD4 (ENSACCG00020000112) #11	ZFYVE28 (ENSACCG00020000113) #12	CFAP99 (ENSACCG00020000114) #13	ENSACCG00020000115 #14	ENSACCG00020000116 #14	FAM193A (ENSACCG00020000117) #15	TNIP2 (ENSACCG00020000118) #16	SH3BP2 (ENSACCG00020000119) #17	ADD1 (ENSACCG00020000120) #18	ENSACCG00020000121 #19	NOP14 (ENSACCG00020000122) #20	GRK4 (ENSACCG00020000123) #22	HTT (ENSACCG00020000124) #23	MSANTD1 (ENSACCG00020000125) #24	RGS12 (ENSACCG00020000126) #25	HGFAC (ENSACCG00020000127) #26	DOK7 (ENSACCG00020000128) #27	LRPAP1 (ENSACCG00020000129) #28	ADRA2C (ENSACCG00020000130) #30	ENSACCG00020000131	ENSACCG00020000132	CPZ (ENSACCG00020000133) #32	GPR78 (ENSACCG00020000134) #33	TRMT44 (ENSACCG00020000135) #34	ACOX3 (ENSACCG00020000136) #35	HTRA3 (ENSACCG00020000137) #36	ENSACCG00020000138
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a
Anatidae	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D	ENSGT00950000182850.a.b.a.a
Duck	MODERN SPECIES	22	ENSAPLG00000016870	C4orf48 (ENSAPLG00000027604)	NAT8L (ENSAPLG00000004458) #7	POLN (ENSAPLG00000004531) #8	HAUS3 (ENSAPLG00000004991) #10	MXD4 (ENSAPLG00000004997) #11	ZFYVE28 (ENSAPLG00000004999) #12	CFAP99 (ENSAPLG00000005144) #13	RNF4 (ENSAPLG00000005244) #14	FAM193A (ENSAPLG00000005276) #15	TNIP2 (ENSAPLG00000005556) #16	SH3BP2 (ENSAPLG00000005759) #17	ADD1 (ENSAPLG00000006148) #18	ENSAPLG00000029573	NOP14 (ENSAPLG00000006726) #20	GRK4 (ENSAPLG00000007220) #22	HTT (ENSAPLG00000007777) #23	MSANTD1 (ENSAPLG00000008738) #24	ENSAPLG00000008768 #25	ENSAPLG00000017346 #25	HGFAC (ENSAPLG00000009213) #26	DOK7 (ENSAPLG00000009564) #27	LRPAP1 (ENSAPLG00000009747) #28	ADRA2C (ENSAPLG00000000625) #30	ENSAPLG00000030640	ENSAPLG00000028415	CPZ (ENSAPLG00000010071) #32	GPR78 (ENSAPLG00000010509) #33	TRMT44 (ENSAPLG00000010512) #34	ACOX3 (ENSAPLG00000010626) #35	HTRA3 (ENSAPLG00000020579) #36
Pink-footed goose	MODERN SPECIES	7	NELFA (ENSABRG00000008734)	ENSABRG00000008727	NAT8L (ENSABRG00000008714) #7	POLN (ENSABRG00000008656) #8	HAUS3 (ENSABRG00000008704) #10	MXD4 (ENSABRG00000008646) #11	ZFYVE28 (ENSABRG00000008507) #12	CFAP99 (ENSABRG00000008431) #13	RNF4 (ENSABRG00000008422) #14	FAM193A (ENSABRG00000007852) #15	TNIP2 (ENSABRG00000007791) #16	SH3BP2 (ENSABRG00000007608) #17	ADD1 (ENSABRG00000006412) #18	ENSABRG00000006173 #19	NOP14 (ENSABRG00000005884) #20	GRK4 (ENSABRG00000005802) #22	HTT (ENSABRG00000005491) #23	MSANTD1 (ENSABRG00000005427) #24	RGS12 (ENSABRG00000004091) #25	HGFAC (ENSABRG00000003427) #26	DOK7 (ENSABRG00000003334) #27	LRPAP1 (ENSABRG00000003299) #28	ADRA2C (ENSABRG00000003272) #30	ENSABRG00000003242	ENSABRG00000003230	CPZ (ENSABRG00000003208) #32	GPR78 (ENSABRG00000003186) #33	TRMT44 (ENSABRG00000003154) #34	ACOX3 (ENSABRG00000003051) #35	HTRA3 (ENSABRG00000003022) #36	ENSABRG00000002976
Phasianidae	DUPLICATION
Phasianidae	DUPLICATION
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000160151.i.a #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000160151.i.a #22
Turkey	MODERN SPECIES	24	ENSMGAG00000012878 #34	ENSMGAG00000012879 #35	GPR78 (ENSMGAG00000012900) #33	ENSMGAG00000012892 #32	ENSMGAG00000017633	ENSMGAG00000015757 #30	ENSMGAG00000015760	ENSMGAG00000017513	ENSMGAG00000012902 #28	ENSMGAG00000012909 #27	ENSMGAG00000012912 #26	ENSMGAG00000018158 #25	ENSMGAG00000012930 #24	ENSMGAG00000012938 #23	ENSMGAG00000017718	ENSMGAG00000022069 #22	ENSMGAG00000012958 #22	NOP14 (ENSMGAG00000012970) #20	ENSMGAG00000012995 #18	ENSMGAG00000012986 #19	ENSMGAG00000013006 #17	ENSMGAG00000013010 #16	ENSMGAG00000013014 #15	ENSMGAG00000017780 #14	ENSMGAG00000013021 #13	ENSMGAG00000013023 #12	ENSMGAG00000020900 #12	ENSMGAG00000021919	ENSMGAG00000017584 #11	ENSMGAG00000013033 #10	NAT8L (ENSMGAG00000016877) #7
Japanese quail	MODERN SPECIES	22	ENSCJPG00005000849	C4orf48 (ENSCJPG00005000845)	NAT8L (ENSCJPG00005000839) #7	POLN (ENSCJPG00005000822) #8	HAUS3 (ENSCJPG00005000834) #10	MXD4 (ENSCJPG00005000809) #11	ZFYVE28 (ENSCJPG00005000799) #12	CFAP99 (ENSCJPG00005000780) #13	RNF4 (ENSCJPG00005000772) #14	FAM193A (ENSCJPG00005000765) #15	TNIP2 (ENSCJPG00005000763) #16	SH3BP2 (ENSCJPG00005000067) #17	ADD1 (ENSCJPG00005019167) #18	ENSCJPG00005019166 #19	NOP14 (ENSCJPG00005019107) #20	GRK4 (ENSCJPG00005019106) #22	HTT (ENSCJPG00005018632) #23	MSANTD1 (ENSCJPG00005018622) #24	ENSCJPG00005018621 #25	ENSCJPG00005018620 #25	HGFAC (ENSCJPG00005018570) #26	DOK7 (ENSCJPG00005018569) #27	LRPAP1 (ENSCJPG00005018568) #28	ENSCJPG00005018564	ADRA2C (ENSCJPG00005018563) #30	ENSCJPG00005018561	ENSCJPG00005018560	CPZ (ENSCJPG00005018559) #32	GPR78 (ENSCJPG00005018558) #33	TRMT44 (ENSCJPG00005018557) #34	ACOX3 (ENSCJPG00005018556) #35
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000160151.i.b #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000160151.i.b #22
Turkey	MODERN SPECIES	24	ENSMGAG00000012879 #35	GPR78 (ENSMGAG00000012900) #33	ENSMGAG00000012892 #32	ENSMGAG00000017633	ENSMGAG00000015757 #30	ENSMGAG00000015760	ENSMGAG00000017513	ENSMGAG00000012902 #28	ENSMGAG00000012909 #27	ENSMGAG00000012912 #26	ENSMGAG00000018158 #25	ENSMGAG00000012930 #24	ENSMGAG00000012938 #23	ENSMGAG00000017718	ENSMGAG00000022069 #22	ENSMGAG00000012958 #22	NOP14 (ENSMGAG00000012970) #20	ENSMGAG00000012995 #18	ENSMGAG00000012986 #19	ENSMGAG00000013006 #17	ENSMGAG00000013010 #16	ENSMGAG00000013014 #15	ENSMGAG00000017780 #14	ENSMGAG00000013021 #13	ENSMGAG00000013023 #12	ENSMGAG00000020900 #12	ENSMGAG00000021919	ENSMGAG00000017584 #11	ENSMGAG00000013033 #10	NAT8L (ENSMGAG00000016877) #7	ENSMGAG00000013044
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151.j #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000153118.eb.h	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151.j #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000153118.eb.h	ENSGT00940000161707.b #30	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Chicken	MODERN SPECIES	33	ENSGALG00010016735	C4orf48 (ENSGALG00010016731)	NAT8L (ENSGALG00010017631) #7	POLN (ENSGALG00010017619) #8	HAUS3 (ENSGALG00010017613) #10	MXD4 (ENSGALG00010017600) #11	ZFYVE28 (ENSGALG00010017586) #12	CFAP99 (ENSGALG00010017561) #13	RNF4 (ENSGALG00010017547) #14	FAM193A (ENSGALG00010017533) #15	TNIP2 (ENSGALG00010017513) #16	SH3BP2 (ENSGALG00010017464) #17	ADD1 (ENSGALG00010016011) #18	ENSGALG00010015971 #19	NOP14 (ENSGALG00010016417) #20	GRK4 (ENSGALG00010016403) #22	HTT (ENSGALG00010016385) #23	MSANTD1 (ENSGALG00010016369) #24	RGS12 (ENSGALG00010016340) #25	HGFAC (ENSGALG00010016263) #26	ENSGALG00010016229	DOK7 (ENSGALG00010016696) #27	LRPAP1 (ENSGALG00010016673) #28	ENSGALG00010016662	ADRA2C (ENSGALG00010016648) #30	HMX1 (ENSGALG00010016091)	SOHO1 (ENSGALG00010016057)	CPZ (ENSGALG00010017003) #32	GPR78 (ENSGALG00010016990) #33	TRMT44 (ENSGALG00010016423) #34	ACOX3 (ENSGALG00010009294) #35
African ostrich	MODERN SPECIES	1016	C4orf48 (ENSSCUG00000015511)	ENSSCUG00000015512	NAT8L (ENSSCUG00000015515) #7	POLN (ENSSCUG00000015522) #8	HAUS3 (ENSSCUG00000015531) #10	MXD4 (ENSSCUG00000015532) #11	ZFYVE28 (ENSSCUG00000015535) #12	CFAP99 (ENSSCUG00000015539) #13	RNF4 (ENSSCUG00000015543) #14	FAM193A (ENSSCUG00000015560) #15	TNIP2 (ENSSCUG00000015578) #16	SH3BP2 (ENSSCUG00000015584) #17	ADD1 (ENSSCUG00000015592) #18	ENSSCUG00000015597 #19	NOP14 (ENSSCUG00000015599) #20	GRK4 (ENSSCUG00000015602) #22	HTT (ENSSCUG00000015693) #23	MSANTD1 (ENSSCUG00000015836) #24	RGS12 (ENSSCUG00000015845) #25	HGFAC (ENSSCUG00000015856) #26	DOK7 (ENSSCUG00000015865) #27	LRPAP1 (ENSSCUG00000015871) #28	ADRA2C (ENSSCUG00000015879) #30	HMX3 (ENSSCUG00000015881)	CPZ (ENSSCUG00000015884) #32	GPR78 (ENSSCUG00000015887) #33	TRMT44 (ENSSCUG00000015891) #34	ACOX3 (ENSSCUG00000015894) #35	HTRA3 (ENSSCUG00000015900) #36	ENSSCUG00000015904	ABLIM2 (ENSSCUG00000015911)
Australian saltwater crocodile	MODERN SPECIES	65	NELFA (ENSCPRG00005001509)	C4orf48 (ENSCPRG00005001551)	NAT8L (ENSCPRG00005001582) #7	POLN (ENSCPRG00005001601) #8	HAUS3 (ENSCPRG00005001652) #10	MXD4 (ENSCPRG00005001655) #11	ZFYVE28 (ENSCPRG00005001725) #12	CFAP99 (ENSCPRG00005001738) #13	RNF4 (ENSCPRG00005001756) #14	FAM193A (ENSCPRG00005001785) #15	TNIP2 (ENSCPRG00005001931) #16	SH3BP2 (ENSCPRG00005001952) #17	ADD1 (ENSCPRG00005001982) #18	ENSCPRG00005002033 #19	NOP14 (ENSCPRG00005002058) #20	GRK4 (ENSCPRG00005002072) #22	HTT (ENSCPRG00005002177) #23	MSANTD1 (ENSCPRG00005002576) #24	RGS12 (ENSCPRG00005002625) #25	ENSCPRG00005002916 #26	ENSCPRG00005002921 #26	DOK7 (ENSCPRG00005002935) #27	LRPAP1 (ENSCPRG00005002961) #28	ADRA2C (ENSCPRG00005003063) #30	ENSCPRG00005003080	ENSCPRG00005003084	HMX1 (ENSCPRG00005003086) #31	CPZ (ENSCPRG00005003114) #32	GPR78 (ENSCPRG00005003128) #33	TRMT44 (ENSCPRG00005003147) #34	ENSCPRG00005003171
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581.d #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.h #25	ENSGT00940000159778 #26	ENSGT00390000001149	ENSGT00390000003127	ENSGT00940000170324	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00390000005342	ENSGT00390000013043	ENSGT00960000189789	ENSGT00950000182932.B #7	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581.d #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.h #25	ENSGT00940000159778 #26	ENSGT00390000001149.d	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Goode s thornscrub tortoise	MODERN SPECIES	19	NELFA (ENSGEVG00005001927)	C4orf48 (ENSGEVG00005001945)	ENSGEVG00005001957	NAT8L (ENSGEVG00005001962) #7	HAUS3 (ENSGEVG00005001972) #10	MXD4 (ENSGEVG00005001978) #11	ZFYVE28 (ENSGEVG00005002043) #12	CFAP99 (ENSGEVG00005002179) #13	RNF4 (ENSGEVG00005002218) #14	FAM193A (ENSGEVG00005002232) #15	TNIP2 (ENSGEVG00005002252) #16	SH3BP2 (ENSGEVG00005002263) #17	ADD1 (ENSGEVG00005002310) #18	ENSGEVG00005002372 #19	NOP14 (ENSGEVG00005002393) #20	GRK4 (ENSGEVG00005002427) #22	HTT (ENSGEVG00005002723) #23	MSANTD1 (ENSGEVG00005003475) #24	RGS12 (ENSGEVG00005003494) #25	HGFAC (ENSGEVG00005003528) #26	ENSGEVG00005003553	DOK7 (ENSGEVG00005003575) #27	LRPAP1 (ENSGEVG00005003603) #28	ADRA2C (ENSGEVG00005009045) #30	ENSGEVG00005009071	ENSGEVG00005009099	CPZ (ENSGEVG00005009142) #32	GPR78 (ENSGEVG00005009219) #33	ACOX3 (ENSGEVG00005009570) #35	HTRA3 (ENSGEVG00005009626) #36	ENSGEVG00005009702
Abingdon island giant tortoise	MODERN SPECIES	775		ENSCABG00000003490	ENSCABG00000003443	HAUS3 (ENSCABG00000003435) #10	MXD4 (ENSCABG00000003432) #11	ENSCABG00000003425 #12	CFAP99 (ENSCABG00000003392) #13	RNF4 (ENSCABG00000003382) #14	FAM193A (ENSCABG00000002922) #15	TNIP2 (ENSCABG00000002913) #16	NAA10 (ENSCABG00000002909)	SH3BP2 (ENSCABG00000002906) #17	ADD1 (ENSCABG00000002886) #18	ENSCABG00000002869 #19	NOP14 (ENSCABG00000002854) #20	GRK4 (ENSCABG00000002546) #22	ENSCABG00000000606 #23
Emydidae	ANCESTRAL SPECIES	1	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904.o #10	ENSGT00940000160120 #11	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581.d #18	ENSGT00830000128422 #19	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.h #25	ENSGT00940000159778 #26	ENSGT00390000001149.e	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000167254	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36
Three-toed box turtle	MODERN SPECIES	26	NELFA (ENSTMTG00000002358)	ENSTMTG00000002350	C4orf48 (ENSTMTG00000002341)	NAT8L (ENSTMTG00000002337) #7	POLN (ENSTMTG00000002310) #8	HAUS3 (ENSTMTG00000002295) #10	MXD4 (ENSTMTG00000002289) #11	ZFYVE28 (ENSTMTG00000002279) #12	CFAP99 (ENSTMTG00000002255) #13	FAM193A (ENSTMTG00000002228) #15	TNIP2 (ENSTMTG00000002209) #16	SH3BP2 (ENSTMTG00000002197) #17	ADD1 (ENSTMTG00000002162) #18	ENSTMTG00000002147 #19	NOP14 (ENSTMTG00000002129) #20	GRK4 (ENSTMTG00000002116) #22	HTT (ENSTMTG00000001181) #23	MSANTD1 (ENSTMTG00000000976) #24	ENSTMTG00000000958 #25	ENSTMTG00000000940 #25	HGFAC (ENSTMTG00000000923) #26	ENSTMTG00000000913	DOK7 (ENSTMTG00000000894) #27	LRPAP1 (ENSTMTG00000000865) #28	ADRA2C (ENSTMTG00000000854) #30	HMX1 (ENSTMTG00000000845) #31	ENSTMTG00000000832	CPZ (ENSTMTG00000000812) #32	GPR78 (ENSTMTG00000000785) #33	TRMT44 (ENSTMTG00000000727) #34	ACOX3 (ENSTMTG00000000680) #35
painted turtle	MODERN SPECIES	778													ENSCPBG00000013809 #18	ENSCPBG00000013840 #19	NOP14 (ENSCPBG00000013842) #20	GRK4 (ENSCPBG00000013883) #22	HTT (ENSCPBG00000017030) #23	MSANTD1 (ENSCPBG00000019394) #24	ENSCPBG00000019396 #25	MRPL1 (ENSCPBG00000019401)	CNOT6L (ENSCPBG00000019403)	ENSCPBG00000019406	CXCL13 (ENSCPBG00000019408)	CCNG2 (ENSCPBG00000019409)	CCNI (ENSCPBG00000019412)	SEPTIN11 (ENSCPBG00000019417)	ENSCPBG00000019423	ENSCPBG00000019425	SHROOM3 (ENSCPBG00000019428)	CCDC158 (ENSCPBG00000019432)	STBD1 (ENSCPBG00000019435)
Chinese turtle	MODERN SPECIES	1451															ENSPSIG00000015235 #20	GRK4 (ENSPSIG00000015084) #22	HTT (ENSPSIG00000015056) #23	MSANTD1 (ENSPSIG00000015046) #24	RGS12 (ENSPSIG00000014932) #25	HGFAC (ENSPSIG00000014780) #26	ENSPSIG00000014759	DOK7 (ENSPSIG00000014752) #27	LRPAP1 (ENSPSIG00000014672) #28	ENSPSIG00000000922	ADRA2C (ENSPSIG00000000913) #30	ENSPSIG00000000907	ENSPSIG00000014657	ENSPSIG00000014653	ENSPSIG00000014536 #32	GPR78 (ENSPSIG00000014522) #33	TRMT44 (ENSPSIG00000014471) #34
Anura	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043	ENSGT00950000182932.B #7	ENSGT00940000159015 #8	ENSGT00390000011904 #10	ENSGT00940000157217 #12	ENSGT00500000045231 #13	ENSGT00390000010318 #14	ENSGT00390000000973.a.b #15	ENSGT00510000046908.a.b #16	ENSGT00390000002216 #17	ENSGT00940000158581 #18	ENSGT00830000128422 #19	ENSGT00940000166449	ENSGT00390000017459 #20	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b #30	ENSGT00940000162580 #31	ENSGT00940000165038	ENSGT00940000156391 #32	ENSGT00950000183001.b #33	ENSGT00390000000645 #34	ENSGT00940000159423 #35	ENSGT00940000159570 #36	ENSGT00530000063812.D
Leishan spiny toad	MODERN SPECIES		POLN (ENSLLEG00000002648) #8	HAUS3 (ENSLLEG00000002622) #10	ENSLLEG00000002583	ENSLLEG00000002562	ZFYVE28 (ENSLLEG00000002472) #12	CFAP99 (ENSLLEG00000002429) #13	ENSLLEG00000002418	RNF4 (ENSLLEG00000002390) #14	FAM193A (ENSLLEG00000002264) #15	ENSLLEG00000002235	ENSLLEG00000002227	TNIP2 (ENSLLEG00000002209) #16	ENSLLEG00000002195	ENSLLEG00000002187	ENSLLEG00000002163	GRK4 (ENSLLEG00000002052) #22	ENSLLEG00000001993	NOP14 (ENSLLEG00000001956) #20	ENSLLEG00000001942	ENSLLEG00000001915 #19	ADD1 (ENSLLEG00000001766) #18	SH3BP2 (ENSLLEG00000001643) #17	ENSLLEG00000001614	ENSLLEG00000001597	HTT (ENSLLEG00000001235) #23	MSANTD1 (ENSLLEG00000001183) #24	RGS12 (ENSLLEG00000001010) #25	HGFAC (ENSLLEG00000000930) #26	DOK7 (ENSLLEG00000000832) #27	LRPAP1 (ENSLLEG00000000785) #28	ENSLLEG00000000772
Frog	MODERN SPECIES		rnf4 (ENSXETG00000025752) #14	selenbp1 (ENSXETG00000012108) #15	tnip2 (ENSXETG00000012114) #16	sh3bp2 (ENSXETG00000035183) #17	add1 (ENSXETG00000008015) #18	mfsd10 (ENSXETG00000008016) #19	vim.2 (ENSXETG00000008017)	ENSXETG00000042367	ENSXETG00000044541	ENSXETG00000042929	ppp1r16a (ENSXETG00000014711) #20	ENSXETG00000039877 #20	cgl.2 (ENSXETG00000026046)	ENSXETG00000003255	ENSXETG00000049078	grk4 (ENSXETG00000014715) #22	htt (ENSXETG00000014723) #23	msantd1 (ENSXETG00000030184) #24	rgs12 (ENSXETG00000026042) #25	hgfac (ENSXETG00000005495) #26	dok7 (ENSXETG00000036226) #27	slc17a6 (ENSXETG00000005500) #28	adra2c (ENSXETG00000015427) #30	hmx1 (ENSXETG00000047665) #31	soho1 (ENSXETG00000048121)	ENSXETG00000047980	ENSXETG00000047092	cpz (ENSXETG00000015417) #32	gpr78 (ENSXETG00000042812) #33	acox3 (ENSXETG00000031495) #35	trmt44 (ENSXETG00000030882) #34
Coelacanth	MODERN SPECIES	655										TNIP2 (ENSLACG00000015499) #16	SH3BP2 (ENSLACG00000014255) #17	ADD1 (ENSLACG00000012904) #18	mfsd10 (ENSLACG00000012385) #19	NOP14 (ENSLACG00000011939) #20	ENSLACG00000011860	GRK4 (ENSLACG00000008724) #22	HTT (ENSLACG00000005863) #23	MSANTD1 (ENSLACG00000022361) #24	ENSLACG00000003768 #25