Theria	ANCESTRAL SPECIES	6	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Primates	ANCESTRAL SPECIES	10	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.u #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Hominidae	ANCESTRAL SPECIES	12	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.u #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.u #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000159350.c #30	ENSGT00390000012901 #31	ENSGT00390000003477 #32	ENSGT00940000158750 #33	ENSGT00390000000483.b #34	ENSGT00390000014853.c #35	ENSGT00390000014122.i.b.a.a.a.b #36	ENSGT00940000161623 #37
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.u #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000159350.c #30	ENSGT00390000012901 #31	ENSGT00390000003477 #32	ENSGT00940000158750 #33	ENSGT00390000000483.b #34	ENSGT00390000014853.c #35	ENSGT00390000014122.i.b.a.a.a.b #36	ENSGT00940000161623 #37
Pan	ANCESTRAL SPECIES	7	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.u #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000159350.c #30	ENSGT00390000012901 #31	ENSGT00390000003477 #32	ENSGT00940000158750 #33	ENSGT00390000000483.b #34	ENSGT00390000014853.c #35	ENSGT00390000014122.i.b.a.a.a.b #36	ENSGT00940000161623 #37
Bonobo	MODERN SPECIES	17	ENSPPAG00000040365 #7	ENSPPAG00000033617 #8	POLN (ENSPPAG00000042877) #9	ENSPPAG00000026673 #10	HAUS3 (ENSPPAG00000032988) #11	ENSPPAG00000042591 #12	ZFYVE28 (ENSPPAG00000013584) #13	CFAP99 (ENSPPAG00000035753) #14	RNF4 (ENSPPAG00000035112) #15	FAM193A (ENSPPAG00000039176) #16	ENSPPAG00000035246 #17	SH3BP2 (ENSPPAG00000036464) #18	ADD1 (ENSPPAG00000039399) #19	MFSD10 (ENSPPAG00000041607) #20	NOP14 (ENSPPAG00000037688) #21	GRK4 (ENSPPAG00000030121) #22	HTT (ENSPPAG00000029038) #23	MSANTD1 (ENSPPAG00000037208) #24	RGS12 (ENSPPAG00000034542) #25	HGFAC (ENSPPAG00000019181) #26	DOK7 (ENSPPAG00000032260) #27	LRPAP1 (ENSPPAG00000043861) #28	ENSPPAG00000027549 #29	OTOP1 (ENSPPAG00000030805) #30	TMEM128 (ENSPPAG00000032192) #31	LYAR (ENSPPAG00000036565) #32	ZBTB49 (ENSPPAG00000028054) #33	NSG1 (ENSPPAG00000029525) #34	STX18 (ENSPPAG00000033946) #35	ENSPPAG00000030316 #36	MSX1 (ENSPPAG00000032954) #37
Chimpanzee	MODERN SPECIES	17	C4H4orf48 (ENSPTRG00000031284) #7	NAT8L (ENSPTRG00000047587) #8	POLN (ENSPTRG00000034296) #9	ENSPTRG00000052565 #10	HAUS3 (ENSPTRG00000015843) #11	MXD4 (ENSPTRG00000015844) #12	ZFYVE28 (ENSPTRG00000015845) #13	CFAP99 (ENSPTRG00000039939) #14	RNF4 (ENSPTRG00000046370) #15	FAM193A (ENSPTRG00000015847) #16	TNIP2 (ENSPTRG00000015848) #17	SH3BP2 (ENSPTRG00000046864) #18	ADD1 (ENSPTRG00000015850) #19	MFSD10 (ENSPTRG00000015851) #20	NOP14 (ENSPTRG00000015852) #21	GRK4 (ENSPTRG00000015853) #22	HTT (ENSPTRG00000015854) #23	MSANTD1 (ENSPTRG00000015855) #24	RGS12 (ENSPTRG00000015856) #25	HGFAC (ENSPTRG00000015857) #26	DOK7 (ENSPTRG00000015858) #27	LRPAP1 (ENSPTRG00000015860) #28	ADRA2C (ENSPTRG00000034025)	ENSPTRG00000048734	ENSPTRG00000047352	ENSPTRG00000043201	OTOP1 (ENSPTRG00000015865) #30	TMEM128 (ENSPTRG00000015866) #31	LYAR (ENSPTRG00000015867) #32	ZBTB49 (ENSPTRG00000015868) #33	NSG1 (ENSPTRG00000015869) #34
Human	MODERN SPECIES	16	NELFA (ENSG00000185049)	C4orf48 (ENSG00000243449) #7	NAT8L (ENSG00000185818) #8	POLN (ENSG00000130997) #9	HAUS3 (ENSG00000214367) #11	MXD4 (ENSG00000123933) #12	ZFYVE28 (ENSG00000159733) #13	CFAP99 (ENSG00000206113) #14	RNF4 (ENSG00000063978) #15	FAM193A (ENSG00000125386) #16	TNIP2 (ENSG00000168884) #17	SH3BP2 (ENSG00000087266) #18	ADD1 (ENSG00000087274) #19	MFSD10 (ENSG00000109736) #20	NOP14 (ENSG00000087269) #21	GRK4 (ENSG00000125388) #22	HTT (ENSG00000197386) #23	MSANTD1 (ENSG00000188981) #24	RGS12 (ENSG00000159788) #25	HGFAC (ENSG00000109758) #26	DOK7 (ENSG00000175920) #27	LRPAP1 (ENSG00000163956) #28	ADRA2C (ENSG00000184160)	OTOP1 (ENSG00000163982) #30	TMEM128 (ENSG00000132406) #31	LYAR (ENSG00000145220) #32	ZBTB49 (ENSG00000168826) #33	NSG1 (ENSG00000168824) #34	STX18 (ENSG00000168818) #35	MSX1 (ENSG00000163132) #37	CYTL1 (ENSG00000170891)
Gorilla	MODERN SPECIES	17	NELFA (ENSGGOG00000014161)	ENSGGOG00000041239 #7	ENSGGOG00000037682 #8	POLN (ENSGGOG00000006832) #9	ENSGGOG00000015700 #10	HAUS3 (ENSGGOG00000000744) #11	MXD4 (ENSGGOG00000000747) #12	ZFYVE28 (ENSGGOG00000000748) #13	CFAP99 (ENSGGOG00000041964) #14	RNF4 (ENSGGOG00000036446) #15	ENSGGOG00000025865	SH3BP2 (ENSGGOG00000014162) #18	ADD1 (ENSGGOG00000007407) #19	MFSD10 (ENSGGOG00000007420) #20	NOP14 (ENSGGOG00000011213) #21	GRK4 (ENSGGOG00000011226) #22	HTT (ENSGGOG00000016385) #23	MSANTD1 (ENSGGOG00000016453) #24	RGS12 (ENSGGOG00000003385) #25	HGFAC (ENSGGOG00000011172) #26	ENSGGOG00000003413 #27	ENSGGOG00000039176	ENSGGOG00000043042 #27	LRPAP1 (ENSGGOG00000003417) #28	ENSGGOG00000010546	OTOP1 (ENSGGOG00000022820) #30	TMEM128 (ENSGGOG00000013003) #31	LYAR (ENSGGOG00000013006) #32	ZBTB49 (ENSGGOG00000013012) #33	NSG1 (ENSGGOG00000011113) #34	STX18 (ENSGGOG00000011121) #35
Orangutan	MODERN SPECIES	17	NAT8L (ENSPPYG00000014537) #8	POLN (ENSPPYG00000014538) #9	ENSPPYG00000040447	ENSPPYG00000014539 #11	ENSPPYG00000036280	ENSPPYG00000037498 #12	ZFYVE28 (ENSPPYG00000014542) #13	CFAP99 (ENSPPYG00000040137) #14	RNF4 (ENSPPYG00000025865) #15	FAM193A (ENSPPYG00000014544) #16	TNIP2 (ENSPPYG00000014545) #17	SH3BP2 (ENSPPYG00000014546) #18	ADD1 (ENSPPYG00000014547) #19	ENSPPYG00000014548	NOP14 (ENSPPYG00000014549) #21	GRK4 (ENSPPYG00000014550) #22	HTT (ENSPPYG00000014551) #23	MSANTD1 (ENSPPYG00000014552) #24	RGS12 (ENSPPYG00000014553) #25	HGFAC (ENSPPYG00000029408) #26	DOK7 (ENSPPYG00000014554) #27	LRPAP1 (ENSPPYG00000014556) #28	ADRA2C (ENSPPYG00000036306)	HMX1 (ENSPPYG00000015293)	CPZ (ENSPPYG00000014560)	GPR78 (ENSPPYG00000014561)	TRMT44 (ENSPPYG00000038960)	ACOX3 (ENSPPYG00000014563)	HTRA3 (ENSPPYG00000014564)	SH3TC1 (ENSPPYG00000014566)	ABLIM2 (ENSPPYG00000014567)
Gibbon	MODERN SPECIES	12	ENSNLEG00000035664 #8	ENSNLEG00000000145 #11	POLN (ENSNLEG00000000132) #9	ENSNLEG00000036277	ENSNLEG00000000149 #12	ZFYVE28 (ENSNLEG00000000151) #13	ENSNLEG00000000154 #14	ENSNLEG00000034085	ENSNLEG00000031900 #15	FAM193A (ENSNLEG00000000167) #16	ENSNLEG00000000191 #17	SH3BP2 (ENSNLEG00000000199) #18	ADD1 (ENSNLEG00000000201) #19	MFSD10 (ENSNLEG00000000234) #20	NOP14 (ENSNLEG00000000239) #21	GRK4 (ENSNLEG00000000261) #22	HTT (ENSNLEG00000000273) #23	ENSNLEG00000000286 #24	ENSNLEG00000000287 #25	HGFAC (ENSNLEG00000000301) #26	DOK7 (ENSNLEG00000000308) #27	LRPAP1 (ENSNLEG00000000309) #28	ENSNLEG00000018645	ENSNLEG00000031510	ENSNLEG00000011937	GPR78 (ENSNLEG00000011932)	TRMT44 (ENSNLEG00000011922)	ACOX3 (ENSNLEG00000011919)	HTRA3 (ENSNLEG00000011913)	SH3TC1 (ENSNLEG00000011887)	ENSNLEG00000028406
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Vervet Monkey	MODERN SPECIES	19	NSD2 (ENSCSAG00000015664)	NELFA (ENSCSAG00000015669)	C4orf48 (ENSCSAG00000015674) #7	NAT8L (ENSCSAG00000015681) #8	POLN (ENSCSAG00000015716) #9	HAUS3 (ENSCSAG00000015734) #11	MXD4 (ENSCSAG00000015741) #12	ZFYVE28 (ENSCSAG00000015744) #13	CFAP99 (ENSCSAG00000015752) #14	FAM193A (ENSCSAG00000015766) #16	TNIP2 (ENSCSAG00000015771) #17	SH3BP2 (ENSCSAG00000015782) #18	ADD1 (ENSCSAG00000015789) #19	MFSD10 (ENSCSAG00000015797) #20	NOP14 (ENSCSAG00000015804) #21	GRK4 (ENSCSAG00000015830) #22	HTT (ENSCSAG00000015865) #23	MSANTD1 (ENSCSAG00000015872) #24	RGS12 (ENSCSAG00000015902) #25	HGFAC (ENSCSAG00000015923) #26	DOK7 (ENSCSAG00000015932) #27	ENSCSAG00000019706	LRPAP1 (ENSCSAG00000015939) #28	ENSCSAG00000015942	ADRA2C (ENSCSAG00000019705)	HMX1 (ENSCSAG00000015947)	CPZ (ENSCSAG00000015954)	GPR78 (ENSCSAG00000015965)	TRMT44 (ENSCSAG00000015971)	HTRA3 (ENSCSAG00000015988)	SH3TC1 (ENSCSAG00000015999)
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Olive baboon	MODERN SPECIES	13	ENSPANG00000029835	C4orf48 (ENSPANG00000006016) #7	POLN (ENSPANG00000000640) #9	HAUS3 (ENSPANG00000007327) #11	ENSPANG00000049266	MXD4 (ENSPANG00000024535) #12	ZFYVE28 (ENSPANG00000001128) #13	CFAP99 (ENSPANG00000034047) #14	RNF4 (ENSPANG00000013408) #15	FAM193A (ENSPANG00000006875) #16	TNIP2 (ENSPANG00000019351) #17	SH3BP2 (ENSPANG00000021586) #18	ADD1 (ENSPANG00000018890) #19	ENSPANG00000018032	NOP14 (ENSPANG00000009642) #21	GRK4 (ENSPANG00000015062) #22	HTT (ENSPANG00000020180) #23	MSANTD1 (ENSPANG00000012405) #24	ENSPANG00000041456 #25	ENSPANG00000016251 #25	HGFAC (ENSPANG00000021871) #26	ENSPANG00000018167 #27	LRPAP1 (ENSPANG00000015064) #28	HTRA3 (ENSPANG00000007655)	ACOX3 (ENSPANG00000008200)	TRMT44 (ENSPANG00000006054)	GPR78 (ENSPANG00000010873)	CPZ (ENSPANG00000017849)	ENSPANG00000042411	ENSPANG00000014105	HMX1 (ENSPANG00000046521)
Cercopithecinae_d	ANCESTRAL SPECIES	85	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Sooty mangabey	MODERN SPECIES	649	C4orf48 (ENSCATG00000036109) #7	NAT8L (ENSCATG00000039077) #8	ENSCATG00000036129 #10	POLN (ENSCATG00000038015) #9	HAUS3 (ENSCATG00000038591) #11	MXD4 (ENSCATG00000037468) #12	ZFYVE28 (ENSCATG00000043569) #13	CFAP99 (ENSCATG00000015552) #14	RNF4 (ENSCATG00000035992) #15	FAM193A (ENSCATG00000042635) #16	ENSCATG00000012185	SH3BP2 (ENSCATG00000032838) #18	ADD1 (ENSCATG00000020512) #19	ENSCATG00000036685	NOP14 (ENSCATG00000032427) #21	GRK4 (ENSCATG00000035371) #22	HTT (ENSCATG00000040455) #23	MSANTD1 (ENSCATG00000035501) #24	RGS12 (ENSCATG00000034123) #25	HGFAC (ENSCATG00000040884) #26	DOK7 (ENSCATG00000036059) #27	LRPAP1 (ENSCATG00000035154) #28	ADRA2C (ENSCATG00000042063)	HMX1 (ENSCATG00000032412)	CPZ (ENSCATG00000013066)	GPR78 (ENSCATG00000043357)	TRMT44 (ENSCATG00000035762)	ACOX3 (ENSCATG00000031306)	HTRA3 (ENSCATG00000037928)	SH3TC1 (ENSCATG00000035668)	ABLIM2 (ENSCATG00000030535)
Macaca	ANCESTRAL SPECIES	25	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00910000148469	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c	ENSGT00950000182850.a.b.a.a
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00390000000703.h.h.a	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.a.b.b.b.a.b.a.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000059887 #8	POLN (ENSMFAG00000032512) #9	ENSMFAG00000062209	HAUS3 (ENSMFAG00000034116) #11	ENSMFAG00000053887 #12	ZFYVE28 (ENSMFAG00000062429) #13	CFAP99 (ENSMFAG00000034253) #14	RNF4 (ENSMFAG00000050616) #15	FAM193A (ENSMFAG00000045259) #16	TNIP2 (ENSMFAG00000003617) #17	SH3BP2 (ENSMFAG00000040599) #18	ADD1 (ENSMFAG00000040609) #19	ENSMFAG00000057548	ENSMFAG00000056415	MFSD10 (ENSMFAG00000038471) #20	GRK4 (ENSMFAG00000000327) #22	HTT (ENSMFAG00000036776) #23	MSANTD1 (ENSMFAG00000030979) #24	RGS12 (ENSMFAG00000039419) #25	HGFAC (ENSMFAG00000002414) #26	DOK7 (ENSMFAG00000045592) #27	LRPAP1 (ENSMFAG00000045907) #28	HMX1 (ENSMFAG00000034271)	CPZ (ENSMFAG00000045903)	GPR78 (ENSMFAG00000010719)	ENSMFAG00000052335	TRMT44 (ENSMFAG00000025459)	ACOX3 (ENSMFAG00000037622)	HTRA3 (ENSMFAG00000033668)	ENSMFAG00000036846	ENSMFAG00000064819
Pig-tailed macaque	MODERN SPECIES	590	NAT8L (ENSMNEG00000029002) #8	POLN (ENSMNEG00000044077) #9	ENSMNEG00000034392 #10	HAUS3 (ENSMNEG00000031199) #11	MXD4 (ENSMNEG00000036831) #12	ZFYVE28 (ENSMNEG00000039840) #13	CFAP99 (ENSMNEG00000030381) #14	RNF4 (ENSMNEG00000035146) #15	FAM193A (ENSMNEG00000045102) #16	TNIP2 (ENSMNEG00000045051) #17	SH3BP2 (ENSMNEG00000033987) #18	ADD1 (ENSMNEG00000043560) #19	ENSMNEG00000029943	NOP14 (ENSMNEG00000039699) #21	ENSMNEG00000037083	GRK4 (ENSMNEG00000028235) #22	HTT (ENSMNEG00000037615) #23	MSANTD1 (ENSMNEG00000043740) #24	RGS12 (ENSMNEG00000037042) #25	HGFAC (ENSMNEG00000022644) #26	DOK7 (ENSMNEG00000029872) #27	LRPAP1 (ENSMNEG00000030259) #28	ENSMNEG00000041149	ADRA2C (ENSMNEG00000040943)	HMX1 (ENSMNEG00000039219)	CPZ (ENSMNEG00000031483)	GPR78 (ENSMNEG00000045501)	TRMT44 (ENSMNEG00000030113)	ACOX3 (ENSMNEG00000029626)	HTRA3 (ENSMNEG00000037839)	ENSMNEG00000042252
Rhinopithecus	ANCESTRAL SPECIES	135	ENSGT00940000159015 #9	ENSGT00650000094590 #10	ENSGT01080000257748.b	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00940000164052.c	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A.c
Golden snub-nosed monkey	MODERN SPECIES	2481	C4orf48 (ENSRROG00000029831) #7	ENSRROG00000020413 #8	POLN (ENSRROG00000045711) #9	ENSRROG00000031302 #10	HAUS3 (ENSRROG00000033454) #11	MXD4 (ENSRROG00000040089) #12	ZFYVE28 (ENSRROG00000026858) #13	CFAP99 (ENSRROG00000041025) #14	RNF4 (ENSRROG00000038892) #15	FAM193A (ENSRROG00000033008) #16	TNIP2 (ENSRROG00000045312) #17	SH3BP2 (ENSRROG00000022973) #18	ADD1 (ENSRROG00000038685) #19	ENSRROG00000041583	NOP14 (ENSRROG00000045728) #21	GRK4 (ENSRROG00000011824) #22	HTT (ENSRROG00000039794) #23	MSANTD1 (ENSRROG00000035877) #24	RGS12 (ENSRROG00000030055) #25	HGFAC (ENSRROG00000039081) #26	DOK7 (ENSRROG00000035330) #27	LRPAP1 (ENSRROG00000001847) #28	HMX1 (ENSRROG00000045506)	CPZ (ENSRROG00000029378)	ENSRROG00000004484	GPR78 (ENSRROG00000033737)	TRMT44 (ENSRROG00000031428)	ACOX3 (ENSRROG00000041201)	HTRA3 (ENSRROG00000043722)	SH3TC1 (ENSRROG00000041213)
Black snub-nosed monkey	MODERN SPECIES	2399										FAM193A (ENSRBIG00000022539) #16	ENSRBIG00000005854	SH3BP2 (ENSRBIG00000037661) #18	ADD1 (ENSRBIG00000016212) #19	ENSRBIG00000011690	NOP14 (ENSRBIG00000041250) #21	GRK4 (ENSRBIG00000034736) #22	HTT (ENSRBIG00000038494) #23	MSANTD1 (ENSRBIG00000037857) #24	RGS12 (ENSRBIG00000003368) #25	HGFAC (ENSRBIG00000025676) #26	DOK7 (ENSRBIG00000037866) #27	ENSRBIG00000041368	LRPAP1 (ENSRBIG00000037775) #28
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00390000005342.j	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.w #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422.a	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00950000182895.a.a.a.a.b.k.v.a	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Cebidae	ANCESTRAL SPECIES	4	ENSGT00390000005342.j	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.w #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422.a	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00950000182895.a.a.a.a.b.k.v.a	ENSGT00940000162580	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Cebidae_a	ANCESTRAL SPECIES	34	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.x #15	ENSGT00390000010318.w #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422.a	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a
Capuchin	MODERN SPECIES	521								CFAP99 (ENSCCAG00000029013) #14	ENSCCAG00000036395 #15	FAM193A (ENSCCAG00000036471) #16	TNIP2 (ENSCCAG00000026551) #17	SH3BP2 (ENSCCAG00000033965) #18	ADD1 (ENSCCAG00000028408) #19	ENSCCAG00000018868	NOP14 (ENSCCAG00000034221) #21	GRK4 (ENSCCAG00000022457) #22	HTT (ENSCCAG00000029611) #23	MSANTD1 (ENSCCAG00000001190) #24	RGS12 (ENSCCAG00000028437) #25	HGFAC (ENSCCAG00000028565) #26	DOK7 (ENSCCAG00000020081) #27	LRPAP1 (ENSCCAG00000030718) #28	ENSCCAG00000036922 #13
Bolivian squirrel monkey	MODERN SPECIES	108	NELFA (ENSSBOG00000024481)	ENSSBOG00000021831 #8	POLN (ENSSBOG00000029730) #9	HAUS3 (ENSSBOG00000035151) #11	MXD4 (ENSSBOG00000020590) #12	ZFYVE28 (ENSSBOG00000024678) #13	CFAP99 (ENSSBOG00000026143) #14	ENSSBOG00000010070	RNF4 (ENSSBOG00000031127) #15	FAM193A (ENSSBOG00000035392) #16	ENSSBOG00000028277	SH3BP2 (ENSSBOG00000004638) #18	ADD1 (ENSSBOG00000032628) #19	ENSSBOG00000030513	NOP14 (ENSSBOG00000034906) #21	GRK4 (ENSSBOG00000034886) #22	HTT (ENSSBOG00000001468) #23	MSANTD1 (ENSSBOG00000032002) #24	RGS12 (ENSSBOG00000001879) #25	ENSSBOG00000029708	HGFAC (ENSSBOG00000025765) #26	DOK7 (ENSSBOG00000034734) #27	LRPAP1 (ENSSBOG00000025745) #28	ENSSBOG00000026148	CPZ (ENSSBOG00000023106)	GPR78 (ENSSBOG00000036138)	TRMT44 (ENSSBOG00000025156)	ACOX3 (ENSSBOG00000022268)	HTRA3 (ENSSBOG00000019152)	SH3TC1 (ENSSBOG00000025058)	ABLIM2 (ENSSBOG00000018472)
Marmoset	MODERN SPECIES	15	NELFA (ENSCJAG00000039975)	C4orf48 (ENSCJAG00000044010) #7	NAT8L (ENSCJAG00000014504) #8	HAUS3 (ENSCJAG00000036903) #11	MXD4 (ENSCJAG00000066421) #12	ZFYVE28 (ENSCJAG00000038192) #13	CFAP99 (ENSCJAG00000038947) #14	RNF4 (ENSCJAG00000014371) #15	ENSCJAG00000057846	FAM193A (ENSCJAG00000014343) #16	TNIP2 (ENSCJAG00000014338) #17	SH3BP2 (ENSCJAG00000014306) #18	ADD1 (ENSCJAG00000014227) #19	ENSCJAG00000014217	NOP14 (ENSCJAG00000014174) #21	GRK4 (ENSCJAG00000014129) #22	HTT (ENSCJAG00000014069) #23	MSANTD1 (ENSCJAG00000014062) #24	RGS12 (ENSCJAG00000014023) #25	HGFAC (ENSCJAG00000014013) #26	DOK7 (ENSCJAG00000014004) #27	LRPAP1 (ENSCJAG00000013237) #28	ADRA2C (ENSCJAG00000040081)	ENSCJAG00000055923	HMX1 (ENSCJAG00000044848)	CPZ (ENSCJAG00000021495)	GPR78 (ENSCJAG00000021496)	TRMT44 (ENSCJAG00000021498)	ACOX3 (ENSCJAG00000007110)	HTRA3 (ENSCJAG00000072254)	SH3TC1 (ENSCJAG00000013904)
Tarsier	MODERN SPECIES	3910												SH3BP2 (ENSTSYG00000006088) #18	ADD1 (ENSTSYG00000006020) #19	MFSD10 (ENSTSYG00000036487) #20	NOP14 (ENSTSYG00000007417) #21	GRK4 (ENSTSYG00000009085) #22	HTT (ENSTSYG00000014271) #23	MSANTD1 (ENSTSYG00000006549) #24	POU6F2 (ENSTSYG00000008452)
Strepsirrhini	ANCESTRAL SPECIES	40	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968
Mouse lemur	MODERN SPECIES	9	C4orf48 (ENSMICG00000046656) #7	NAT8L (ENSMICG00000045400) #8	POLN (ENSMICG00000047538) #9	HAUS3 (ENSMICG00000028831) #11	MXD4 (ENSMICG00000047939) #12	ZFYVE28 (ENSMICG00000031619) #13	CFAP99 (ENSMICG00000036187) #14	RNF4 (ENSMICG00000041515) #15	FAM193A (ENSMICG00000008863) #16	TNIP2 (ENSMICG00000008835) #17	SH3BP2 (ENSMICG00000002298) #18	ENSMICG00000030984	ADD1 (ENSMICG00000007785) #19	MFSD10 (ENSMICG00000007796) #20	NOP14 (ENSMICG00000007804) #21	GRK4 (ENSMICG00000006863) #22	HTT (ENSMICG00000006879) #23	MSANTD1 (ENSMICG00000031701) #24	ENSMICG00000030945	RGS12 (ENSMICG00000007623) #25	HGFAC (ENSMICG00000007634) #26	DOK7 (ENSMICG00000006754) #27	LRPAP1 (ENSMICG00000013565) #28	TACC3 (ENSMICG00000038424)	ENSMICG00000007821	WFDC8 (ENSMICG00000011960)	WFDC10A (ENSMICG00000013933)	WFDC11 (ENSMICG00000011178)	ENSMICG00000011195	WFDC13 (ENSMICG00000011200)	SPINT4 (ENSMICG00000004503)
Lemuriformes_a	ANCESTRAL SPECIES	115	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968
Coquerels sifaka	MODERN SPECIES	611										TNIP2 (ENSPCOG00000019392) #17	SH3BP2 (ENSPCOG00000013453) #18	ENSPCOG00000022580	ADD1 (ENSPCOG00000015333) #19	ENSPCOG00000021370	NOP14 (ENSPCOG00000027916) #21	GRK4 (ENSPCOG00000028083) #22	HTT (ENSPCOG00000007028) #23	MSANTD1 (ENSPCOG00000018509) #24	RGS12 (ENSPCOG00000018256) #25	HGFAC (ENSPCOG00000013461) #26	DOK7 (ENSPCOG00000024093) #27	LRPAP1 (ENSPCOG00000022918) #28	ADRA2C (ENSPCOG00000021631)	HMX1 (ENSPCOG00000019742)	CPZ (ENSPCOG00000018885)	TRMT44 (ENSPCOG00000028809)	ACOX3 (ENSPCOG00000015967)	HTRA3 (ENSPCOG00000015549)	NANP (ENSPCOG00000022703)	ENSPCOG00000014381	NINL (ENSPCOG00000019338)
Greater bamboo lemur	MODERN SPECIES	142			HAUS3 (ENSPSMG00000021939) #11	MXD4 (ENSPSMG00000021932) #12	ZFYVE28 (ENSPSMG00000021894) #13	CFAP99 (ENSPSMG00000021870) #14	RNF4 (ENSPSMG00000021847) #15	ENSPSMG00000021804	FAM193A (ENSPSMG00000021759) #16	TNIP2 (ENSPSMG00000021697) #17	ENSPSMG00000021673	SH3BP2 (ENSPSMG00000021670) #18	ADD1 (ENSPSMG00000021592) #19	ENSPSMG00000021410	NOP14 (ENSPSMG00000021287) #21	ENSPSMG00000021263 #22	HTT (ENSPSMG00000021240) #23	MSANTD1 (ENSPSMG00000021143) #24	RGS12 (ENSPSMG00000021108) #25	HGFAC (ENSPSMG00000021052) #26	DOK7 (ENSPSMG00000021025) #27	LRPAP1 (ENSPSMG00000021000) #28	ADRA2C (ENSPSMG00000020973)	HMX1 (ENSPSMG00000020966)	ENSPSMG00000020959	ENSPSMG00000020953	ENSPSMG00000020935	PPIE (ENSPSMG00000020918)	HPCAL4 (ENSPSMG00000020829)	NT5C1A (ENSPSMG00000020805)	HEYL (ENSPSMG00000020795)
Bushbaby	MODERN SPECIES	313	NSD2 (ENSOGAG00000014890)	NELFA (ENSOGAG00000029627)	C4orf48 (ENSOGAG00000031277) #7	NAT8L (ENSOGAG00000026595) #8	POLN (ENSOGAG00000011299) #9	HAUS3 (ENSOGAG00000032569) #11	MXD4 (ENSOGAG00000011305) #12	ZFYVE28 (ENSOGAG00000011309) #13	RNF4 (ENSOGAG00000010776) #15	FAM193A (ENSOGAG00000012386) #16	TNIP2 (ENSOGAG00000012391) #17	SH3BP2 (ENSOGAG00000008463) #18	ADD1 (ENSOGAG00000011061) #19	MFSD10 (ENSOGAG00000011069) #20	NOP14 (ENSOGAG00000011073) #21	GRK4 (ENSOGAG00000005619) #22	HTT (ENSOGAG00000007586) #23	MSANTD1 (ENSOGAG00000007605) #24	RGS12 (ENSOGAG00000007608) #25	DOK7 (ENSOGAG00000007622) #27	LRPAP1 (ENSOGAG00000007628) #28	ZNF879 (ENSOGAG00000032797)	GRM6 (ENSOGAG00000029331)	ENSOGAG00000034371	ZNF518B (ENSOGAG00000029956)	CLNK (ENSOGAG00000012251)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00530000066358
Tree shrew	MODERN SPECIES	5480											SH3BP2 (ENSTBEG00000012811) #18	ADD1 (ENSTBEG00000013055) #19	ENSTBEG00000013365	ENSTBEG00000013501	NOP14 (ENSTBEG00000013627) #21	ENSTBEG00000014054 #22
Glires	ANCESTRAL SPECIES	8	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Rodentia	ANCESTRAL SPECIES	13	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Muroidea	ANCESTRAL SPECIES	17	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Prairie vole	MODERN SPECIES	88					Haus3 (ENSMOCG00000011866) #11	Mxd4 (ENSMOCG00000018278) #12	Zfyve28 (ENSMOCG00000013314) #13	Cfap99 (ENSMOCG00000000107) #14	Rnf4 (ENSMOCG00000018129) #15	Fam193a (ENSMOCG00000003768) #16	Tnip2 (ENSMOCG00000009761) #17	Sh3bp2 (ENSMOCG00000016109) #18	Add1 (ENSMOCG00000020050) #19	Mfsd10 (ENSMOCG00000003513) #20	Nop14 (ENSMOCG00000021638) #21	Grk4 (ENSMOCG00000014083) #22	Htt (ENSMOCG00000019391) #23	Msantd1 (ENSMOCG00000016043) #24	Rgs12 (ENSMOCG00000022287) #25	Hgfac (ENSMOCG00000010840) #26	Dok7 (ENSMOCG00000015164) #27	Lrpap1 (ENSMOCG00000001033) #28	Adra2c (ENSMOCG00000006396)	Hmx1 (ENSMOCG00000013589)	Cpz (ENSMOCG00000021090)	Trmt44 (ENSMOCG00000017807)	Acox3 (ENSMOCG00000005263)	Htra3 (ENSMOCG00000014875)	Sh3tc1 (ENSMOCG00000019986)	Ablim2 (ENSMOCG00000002107)	Afap1 (ENSMOCG00000015747)
Northern American deer mouse	MODERN SPECIES	1	Nsd2 (ENSPEMG00000017277)	Nelfa (ENSPEMG00000016134)	Gm1673 (ENSPEMG00000017743) #7	ENSPEMG00000026053 #8	Poln (ENSPEMG00000008981) #9	Mxd4 (ENSPEMG00000015018) #12	Zfyve28 (ENSPEMG00000003088) #13	Cfap99 (ENSPEMG00000000404) #14	Rnf4 (ENSPEMG00000017150) #15	Fam193a (ENSPEMG00000000297) #16	Tnip2 (ENSPEMG00000013340) #17	Sh3bp2 (ENSPEMG00000015767) #18	Add1 (ENSPEMG00000008717) #19	ENSPEMG00000011931	Nop14 (ENSPEMG00000005399) #21	Grk4 (ENSPEMG00000003121) #22	Htt (ENSPEMG00000000805) #23	Msantd1 (ENSPEMG00000028370) #24	Rgs12 (ENSPEMG00000012259) #25	Hgfac (ENSPEMG00000008506) #26	Dok7 (ENSPEMG00000018287) #27	Lrpap1 (ENSPEMG00000019005) #28	ENSPEMG00000030404	Adra2c (ENSPEMG00000007034)	Hmx1 (ENSPEMG00000007689)	Cpz (ENSPEMG00000018359)	Trmt44 (ENSPEMG00000007598)	Acox3 (ENSPEMG00000008809)	Htra3 (ENSPEMG00000009866)	Sh3tc1 (ENSPEMG00000015098)	Ablim2 (ENSPEMG00000015528)
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Chinese hamster chok1gshd	MODERN SPECIES	44	Nelfa (ENSCGRG00001018745)	Gm1673 (ENSCGRG00001020043) #7	Nat8l (ENSCGRG00001023978) #8	Poln (ENSCGRG00001007876) #9	Haus3 (ENSCGRG00001006121) #11	Mxd4 (ENSCGRG00001011783) #12	Zfyve28 (ENSCGRG00001015693) #13	Cfap99 (ENSCGRG00001018964) #14	Rnf4 (ENSCGRG00001022472) #15	Fam193a (ENSCGRG00001011437) #16	Tnip2 (ENSCGRG00001018278) #17	Sh3bp2 (ENSCGRG00001023205) #18	Add1 (ENSCGRG00001008876) #19	ENSCGRG00001023141	Nop14 (ENSCGRG00001009013) #21	Grk4 (ENSCGRG00001011864) #22	Htt (ENSCGRG00001024008) #23	ENSCGRG00001017546	Msantd1 (ENSCGRG00001020279) #24	Rgs12 (ENSCGRG00001009377) #25	Hgfac (ENSCGRG00001011915) #26	Dok7 (ENSCGRG00001018277) #27	Lrpap1 (ENSCGRG00001019166) #28	Adra2c (ENSCGRG00001008328)	Hmx1 (ENSCGRG00001020782)	Cpz (ENSCGRG00001012760)	Trmt44 (ENSCGRG00001016915)	Acox3 (ENSCGRG00001018521)	Htra3 (ENSCGRG00001010385)	Sh3tc1 (ENSCGRG00001019370)	Ablim2 (ENSCGRG00001019600)
Golden Hamster	MODERN SPECIES	632	Nelfa (ENSMAUG00000022097)	Gm1673 (ENSMAUG00000019500) #7	ENSMAUG00000020607 #8	Poln (ENSMAUG00000008534) #9	Haus3 (ENSMAUG00000000818) #11	Mxd4 (ENSMAUG00000014477) #12	ENSMAUG00000016411 #13	Cfap99 (ENSMAUG00000018621) #14	Rnf4 (ENSMAUG00000022006) #15	Fam193a (ENSMAUG00000013458) #16	Tnip2 (ENSMAUG00000000863) #17	Sh3bp2 (ENSMAUG00000014154) #18	Add1 (ENSMAUG00000010417) #19	ENSMAUG00000009757	Nop14 (ENSMAUG00000011891) #21	Grk4 (ENSMAUG00000019885) #22	Htt (ENSMAUG00000016135) #23	Msantd1 (ENSMAUG00000019122) #24	Rgs12 (ENSMAUG00000020471) #25	Hgfac (ENSMAUG00000014240) #26	Dok7 (ENSMAUG00000013714) #27	Lrpap1 (ENSMAUG00000000794) #28	Adra2c (ENSMAUG00000010360)	Hmx1 (ENSMAUG00000014298)	Cpz (ENSMAUG00000021426)	Trmt44 (ENSMAUG00000021974)	Acox3 (ENSMAUG00000020686)	Htra3 (ENSMAUG00000005565)	Sh3tc1 (ENSMAUG00000021685)	Ablim2 (ENSMAUG00000015012)	Afap1 (ENSMAUG00000011963)
Murinae	ANCESTRAL SPECIES	12	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus	ANCESTRAL SPECIES	14	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Steppe mouse	MODERN SPECIES	3132	Nat8l (ENSMSIG00000021182) #8	Poln (ENSMSIG00000021195) #9	Haus3 (ENSMSIG00000021389) #11	ENSMSIG00000021408 #12	ENSMSIG00000021448	Zfyve28 (ENSMSIG00000021454) #13	Cfap99 (ENSMSIG00000021491) #14	ENSMSIG00000021509	ENSMSIG00000021525 #15	Fam193a (ENSMSIG00000021548) #16	Tnip2 (ENSMSIG00000021599) #17	Sh3bp2 (ENSMSIG00000021641) #18	Add1 (ENSMSIG00000021740) #19	Mfsd10 (ENSMSIG00000022303) #20	Nop14 (ENSMSIG00000022337) #21	Grk4 (ENSMSIG00000022371) #22	Htt (ENSMSIG00000022431) #23	Msantd1 (ENSMSIG00000022619) #24	Rgs12 (ENSMSIG00000022662) #25	Hgfac (ENSMSIG00000022868) #26	Dok7 (ENSMSIG00000022905) #27	Lrpap1 (ENSMSIG00000022985) #28	Adra2c (ENSMSIG00000023019)	ENSMSIG00000023027	Cpz (ENSMSIG00000023039)	Trmt44 (ENSMSIG00000023059)	Acox3 (ENSMSIG00000023076)	Htra3 (ENSMSIG00000023159)	Sh3tc1 (ENSMSIG00000023220)	Ablim2 (ENSMSIG00000023274)
spretus	MODERN SPECIES	14	Nelfa (MGP_SPRETEiJ_G0028119)	MGP_SPRETEiJ_G0028120 #7	Nat8l (MGP_SPRETEiJ_G0028121) #8	Poln (MGP_SPRETEiJ_G0028122) #9	Haus3 (MGP_SPRETEiJ_G0028123) #11	Mxd4 (MGP_SPRETEiJ_G0028124) #12	Zfyve28 (MGP_SPRETEiJ_G0028125) #13	Cfap99 (MGP_SPRETEiJ_G0028126) #14	Rnf4 (MGP_SPRETEiJ_G0028127) #15	Fam193a (MGP_SPRETEiJ_G0028128) #16	Tnip2 (MGP_SPRETEiJ_G0028129) #17	Sh3bp2 (MGP_SPRETEiJ_G0028130) #18	Add1 (MGP_SPRETEiJ_G0028131) #19	Mfsd10 (MGP_SPRETEiJ_G0028132) #20	Nop14 (MGP_SPRETEiJ_G0028133) #21	MGP_SPRETEiJ_G0028134 #22	Htt (MGP_SPRETEiJ_G0028135) #23	Msantd1 (MGP_SPRETEiJ_G0028136) #24	Rgs12 (MGP_SPRETEiJ_G0028137) #25	Hgfac (MGP_SPRETEiJ_G0028138) #26	Dok7 (MGP_SPRETEiJ_G0028139) #27	Lrpap1 (MGP_SPRETEiJ_G0028140) #28	Adra2c (MGP_SPRETEiJ_G0028141)	Hmx1 (MGP_SPRETEiJ_G0028142)	Cpz (MGP_SPRETEiJ_G0028143)	Trmt44 (MGP_SPRETEiJ_G0028144)	Acox3 (MGP_SPRETEiJ_G0028145)	Htra3 (MGP_SPRETEiJ_G0028146)	Sh3tc1 (MGP_SPRETEiJ_G0028147)	Ablim2 (MGP_SPRETEiJ_G0028148)	Afap1 (MGP_SPRETEiJ_G0028149)
Mouse	MODERN SPECIES	14	Nelfa (ENSMUSG00000029111)	Gm1673 (ENSMUSG00000070858) #7	Nat8l (ENSMUSG00000048142) #8	Poln (ENSMUSG00000045102) #9	Haus3 (ENSMUSG00000079555) #11	Mxd4 (ENSMUSG00000037235) #12	Zfyve28 (ENSMUSG00000037224) #13	Cfap99 (ENSMUSG00000109572) #14	Rnf4 (ENSMUSG00000029110) #15	Fam193a (ENSMUSG00000037210) #16	Tnip2 (ENSMUSG00000059866) #17	Sh3bp2 (ENSMUSG00000054520) #18	Add1 (ENSMUSG00000029106) #19	Mfsd10 (ENSMUSG00000001082) #20	Nop14 (ENSMUSG00000036693) #21	Grk4 (ENSMUSG00000052783) #22	Htt (ENSMUSG00000029104) #23	Msantd1 (ENSMUSG00000051246) #24	Rgs12 (ENSMUSG00000029101) #25	Hgfac (ENSMUSG00000029102) #26	Dok7 (ENSMUSG00000044716) #27	Lrpap1 (ENSMUSG00000029103) #28	Adra2c (ENSMUSG00000045318)	Hmx1 (ENSMUSG00000067438)	Cpz (ENSMUSG00000036596)	Trmt44 (ENSMUSG00000029097)	Acox3 (ENSMUSG00000029098)	Htra3 (ENSMUSG00000029096)	Sh3tc1 (ENSMUSG00000036553)	Ablim2 (ENSMUSG00000029095)	Afap1 (ENSMUSG00000029094)
Ryukyu mouse	MODERN SPECIES	14	Nelfa (MGP_CAROLIEiJ_G0027123)	MGP_CAROLIEiJ_G0027124 #7	Nat8l (MGP_CAROLIEiJ_G0027125) #8	Poln (MGP_CAROLIEiJ_G0027126) #9	Haus3 (MGP_CAROLIEiJ_G0027127) #11	Mxd4 (MGP_CAROLIEiJ_G0027128) #12	Zfyve28 (MGP_CAROLIEiJ_G0027129) #13	Cfap99 (MGP_CAROLIEiJ_G0027130) #14	Rnf4 (MGP_CAROLIEiJ_G0027131) #15	Fam193a (MGP_CAROLIEiJ_G0027132) #16	Tnip2 (MGP_CAROLIEiJ_G0027133) #17	Sh3bp2 (MGP_CAROLIEiJ_G0027134) #18	Add1 (MGP_CAROLIEiJ_G0027135) #19	Mfsd10 (MGP_CAROLIEiJ_G0027136) #20	Nop14 (MGP_CAROLIEiJ_G0027137) #21	Grk4 (MGP_CAROLIEiJ_G0027138) #22	Htt (MGP_CAROLIEiJ_G0027139) #23	Msantd1 (MGP_CAROLIEiJ_G0027140) #24	Rgs12 (MGP_CAROLIEiJ_G0027141) #25	Hgfac (MGP_CAROLIEiJ_G0027142) #26	Dok7 (MGP_CAROLIEiJ_G0027143) #27	Lrpap1 (MGP_CAROLIEiJ_G0027144) #28	Adra2c (MGP_CAROLIEiJ_G0027145)	Hmx1 (MGP_CAROLIEiJ_G0027146)	Cpz (MGP_CAROLIEiJ_G0027147)	Trmt44 (MGP_CAROLIEiJ_G0027148)	Acox3 (MGP_CAROLIEiJ_G0027149)	Htra3 (MGP_CAROLIEiJ_G0027150)	Sh3tc1 (MGP_CAROLIEiJ_G0027151)	Ablim2 (MGP_CAROLIEiJ_G0027152)	Afap1 (MGP_CAROLIEiJ_G0027153)
Shrew mouse	MODERN SPECIES	4	Nelfa (MGP_PahariEiJ_G0016907)	MGP_PahariEiJ_G0016908 #7	Nat8l (MGP_PahariEiJ_G0016909) #8	Poln (MGP_PahariEiJ_G0016910) #9	Haus3 (MGP_PahariEiJ_G0016911) #11	Mxd4 (MGP_PahariEiJ_G0016912) #12	Zfyve28 (MGP_PahariEiJ_G0016913) #13	Cfap99 (MGP_PahariEiJ_G0016914) #14	MGP_PahariEiJ_G0016915 #15	Fam193a (MGP_PahariEiJ_G0016916) #16	Tnip2 (MGP_PahariEiJ_G0016917) #17	Sh3bp2 (MGP_PahariEiJ_G0016918) #18	Add1 (MGP_PahariEiJ_G0016919) #19	Mfsd10 (MGP_PahariEiJ_G0016920) #20	Nop14 (MGP_PahariEiJ_G0016921) #21	Grk4 (MGP_PahariEiJ_G0016922) #22	Htt (MGP_PahariEiJ_G0016923) #23	Msantd1 (MGP_PahariEiJ_G0016924) #24	Rgs12 (MGP_PahariEiJ_G0016925) #25	Hgfac (MGP_PahariEiJ_G0016926) #26	Dok7 (MGP_PahariEiJ_G0016927) #27	Lrpap1 (MGP_PahariEiJ_G0016928) #28	Adra2c (MGP_PahariEiJ_G0016929)	Hmx1 (MGP_PahariEiJ_G0016930)	Cpz (MGP_PahariEiJ_G0016931)	Trmt44 (MGP_PahariEiJ_G0016932)	Acox3 (MGP_PahariEiJ_G0016933)	Htra3 (MGP_PahariEiJ_G0016934)	Sh3tc1 (MGP_PahariEiJ_G0016935)	Ablim2 (MGP_PahariEiJ_G0016936)	Afap1 (MGP_PahariEiJ_G0016937)
Rat	MODERN SPECIES	5	Nsd2 (ENSRNOG00000038140)	Nelfa (ENSRNOG00000015474)	RGD1560394 (ENSRNOG00000065022) #7	Nat8l (ENSRNOG00000049351) #8	Poln (ENSRNOG00000069005) #9	Mxd4 (ENSRNOG00000015033) #12	Zfyve28 (ENSRNOG00000014874) #13	Cfap99 (ENSRNOG00000058434) #14	Rnf4 (ENSRNOG00000013930) #15	Fam193a (ENSRNOG00000013832) #16	Tnip2 (ENSRNOG00000013805) #17	Sh3bp2 (ENSRNOG00000013747) #18	Add1 (ENSRNOG00000013039) #19	Mfsd10 (ENSRNOG00000012534) #20	Nop14 (ENSRNOG00000012147) #21	Grk4 (ENSRNOG00000011847) #22	Htt (ENSRNOG00000011073) #23	Msantd1 (ENSRNOG00000064777) #24	LOC108352780 (ENSRNOG00000030162)	Rgs12 (ENSRNOG00000030568) #25	Hgfac (ENSRNOG00000009572) #26	Dok7 (ENSRNOG00000022419) #27	Lrpap1 (ENSRNOG00000009313) #28	Adra2c (ENSRNOG00000009299)	Hmx1 (ENSRNOG00000009154)	Cpz (ENSRNOG00000008947)	Trmt44 (ENSRNOG00000008898)	Acox3 (ENSRNOG00000008474)	Htra3 (ENSRNOG00000008182)	Sh3tc1 (ENSRNOG00000007993)	Ablim2 (ENSRNOG00000007882)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1177	Gm1673 (ENSNGAG00000023348) #7	ENSNGAG00000002900 #8	Poln (ENSNGAG00000022997) #9	Haus3 (ENSNGAG00000014413) #11	Mxd4 (ENSNGAG00000016526) #12	ENSNGAG00000014521 #13	Cfap99 (ENSNGAG00000020586) #14	Rnf4 (ENSNGAG00000018375) #15	Fam193a (ENSNGAG00000021458) #16	Tnip2 (ENSNGAG00000020375) #17	Sh3bp2 (ENSNGAG00000018119) #18	Add1 (ENSNGAG00000013896) #19	ENSNGAG00000004792	ENSNGAG00000019094	Nop14 (ENSNGAG00000023183) #21	Grk4 (ENSNGAG00000019026) #22	Htt (ENSNGAG00000014294) #23	Msantd1 (ENSNGAG00000022576) #24	Rgs12 (ENSNGAG00000019986) #25	Hgfac (ENSNGAG00000016815) #26	Dok7 (ENSNGAG00000018034) #27	Lrpap1 (ENSNGAG00000014620) #28
Lesser Egyptian jerboa	MODERN SPECIES	58	Gm1673 (ENSJJAG00000006076) #7	Nat8l (ENSJJAG00000024226) #8	Poln (ENSJJAG00000012540) #9	Haus3 (ENSJJAG00000013628) #11	ENSJJAG00000017036 #12	ENSJJAG00000000555 #13	Cfap99 (ENSJJAG00000019360) #14	ENSJJAG00000014107 #15	ENSJJAG00000000617	Fam193a (ENSJJAG00000013646) #16	Tnip2 (ENSJJAG00000021336) #17	Sh3bp2 (ENSJJAG00000022545) #18	Add1 (ENSJJAG00000011333) #19	ENSJJAG00000019357	Nop14 (ENSJJAG00000006861) #21	Grk4 (ENSJJAG00000012324) #22	Htt (ENSJJAG00000014310) #23	Msantd1 (ENSJJAG00000015075) #24	ENSJJAG00000022086 #25	ENSJJAG00000022095 #25	Hgfac (ENSJJAG00000017476) #26	Dok7 (ENSJJAG00000017296) #27	Lrpap1 (ENSJJAG00000024126) #28	Hmx1 (ENSJJAG00000022946)	Cpz (ENSJJAG00000023616)	Trmt44 (ENSJJAG00000018255)	Acox3 (ENSJJAG00000015539)	Htra3 (ENSJJAG00000021963)	Sh3tc1 (ENSJJAG00000023163)	Ablim2 (ENSJJAG00000019184)	Afap1 (ENSJJAG00000000844)
Kangaroo rat	MODERN SPECIES	390	Gm1673 (ENSDORG00000009221) #7	ENSDORG00000012646 #8	Poln (ENSDORG00000012647) #9	Haus3 (ENSDORG00000012649) #11	Mxd4 (ENSDORG00000000173) #12	ENSDORG00000026396 #13	Cfap99 (ENSDORG00000025036) #14	Rnf4 (ENSDORG00000006675) #15	Fam193a (ENSDORG00000016576) #16	ENSDORG00000016577 #17	Sh3bp2 (ENSDORG00000010509) #18	Htt (ENSDORG00000003272) #23	ENSDORG00000023495 #19	ENSDORG00000001192	Nop14 (ENSDORG00000001193) #21	ENSDORG00000001194 #22	Msantd1 (ENSDORG00000003277) #24	Rgs12 (ENSDORG00000014704) #25	Hgfac (ENSDORG00000014709) #26	Dok7 (ENSDORG00000014713) #27	Lrpap1 (ENSDORG00000014714) #28	Adra2c (ENSDORG00000029260)	Cpz (ENSDORG00000009339)	Trmt44 (ENSDORG00000006411)	Acox3 (ENSDORG00000015374)	Htra3 (ENSDORG00000002142)	Sh3tc1 (ENSDORG00000007236)	Ablim2 (ENSDORG00000012609)	Afap1 (ENSDORG00000006803)	Sorcs2 (ENSDORG00000027668)	Grpel1 (ENSDORG00000016660)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00390000013043.f #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00940000164052	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00390000005342	ENSGT00390000013043.f #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00940000164052	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.y #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	166												ENSCPOG00000038404	ADD1 (ENSCPOG00000003357) #19	ENSCPOG00000021874	NOP14 (ENSCPOG00000012869) #21	ENSCPOG00000032158 #22	ENSCPOG00000012872 #22	HTT (ENSCPOG00000007218) #23	MSANTD1 (ENSCPOG00000008697) #24	RGS12 (ENSCPOG00000005334) #25	HGFAC (ENSCPOG00000023599) #26	DOK7 (ENSCPOG00000020197) #27	LRPAP1 (ENSCPOG00000005331) #28	ENSCPOG00000023934	HMX1 (ENSCPOG00000022976)	CPZ (ENSCPOG00000025982)	TRMT44 (ENSCPOG00000032399)	ACOX3 (ENSCPOG00000024370)	HTRA3 (ENSCPOG00000019986)	SH3TC1 (ENSCPOG00000004747)	ABLIM2 (ENSCPOG00000009704)
Guinea pig	MODERN SPECIES	166											ENSCPOG00000038404	ADD1 (ENSCPOG00000003357) #19	ENSCPOG00000021874	NOP14 (ENSCPOG00000012869) #21	ENSCPOG00000032158 #22	ENSCPOG00000012872 #22	HTT (ENSCPOG00000007218) #23	MSANTD1 (ENSCPOG00000008697) #24	RGS12 (ENSCPOG00000005334) #25	HGFAC (ENSCPOG00000023599) #26	DOK7 (ENSCPOG00000020197) #27	LRPAP1 (ENSCPOG00000005331) #28	ENSCPOG00000023934	HMX1 (ENSCPOG00000022976)	CPZ (ENSCPOG00000025982)	TRMT44 (ENSCPOG00000032399)	ACOX3 (ENSCPOG00000024370)	HTRA3 (ENSCPOG00000019986)	SH3TC1 (ENSCPOG00000004747)	ABLIM2 (ENSCPOG00000009704)	AFAP1 (ENSCPOG00000023490)
Hystricomorpha_b	ANCESTRAL SPECIES	37	ENSGT00390000005342	ENSGT00390000013043.f #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00940000164052	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.y #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a
Degu	MODERN SPECIES	47	ENSODEG00000011723 #8	ENSODEG00000011259	POLN (ENSODEG00000011265) #9	HAUS3 (ENSODEG00000011986) #11	MXD4 (ENSODEG00000011512) #12	ENSODEG00000011568 #13	CFAP99 (ENSODEG00000011882) #14	RNF4 (ENSODEG00000011133) #15	ENSODEG00000010562	FAM193A (ENSODEG00000010949) #16	ENSODEG00000010959	SH3BP2 (ENSODEG00000011814) #18	ADD1 (ENSODEG00000010953) #19	ENSODEG00000011022	NOP14 (ENSODEG00000011223) #21	GRK4 (ENSODEG00000012144) #22	HTT (ENSODEG00000010889) #23	MSANTD1 (ENSODEG00000009931) #24	ENSODEG00000019744	RGS12 (ENSODEG00000011606) #25	HGFAC (ENSODEG00000010427) #26	DOK7 (ENSODEG00000010960) #27	LRPAP1 (ENSODEG00000011862) #28	ADRA2C (ENSODEG00000009910)	CPZ (ENSODEG00000010389)	TRMT44 (ENSODEG00000009730)	ACOX3 (ENSODEG00000009811)	HTRA3 (ENSODEG00000010864)	SH3TC1 (ENSODEG00000010846)	ABLIM2 (ENSODEG00000009883)	AFAP1 (ENSODEG00000009173)
Long-tailed chinchilla	MODERN SPECIES	221	NELFA (ENSCLAG00000012299)	C4orf48 (ENSCLAG00000009344) #7	ENSCLAG00000009488 #8	POLN (ENSCLAG00000010355) #9	HAUS3 (ENSCLAG00000010866) #11	MXD4 (ENSCLAG00000011445) #12	ZFYVE28 (ENSCLAG00000009540) #13	CFAP99 (ENSCLAG00000012930) #14	RNF4 (ENSCLAG00000014072) #15	FAM193A (ENSCLAG00000014296) #16	ENSCLAG00000006931	SH3BP2 (ENSCLAG00000008009) #18	ADD1 (ENSCLAG00000011442) #19	ENSCLAG00000011338	NOP14 (ENSCLAG00000008622) #21	GRK4 (ENSCLAG00000007161) #22	HTT (ENSCLAG00000007604) #23	MSANTD1 (ENSCLAG00000008147) #24	ENSCLAG00000008016 #25	HGFAC (ENSCLAG00000008342) #26	DOK7 (ENSCLAG00000010230) #27	LRPAP1 (ENSCLAG00000007328) #28	CPZ (ENSCLAG00000010243)	TRMT44 (ENSCLAG00000008063)	ACOX3 (ENSCLAG00000009133)	HTRA3 (ENSCLAG00000007335)	SH3TC1 (ENSCLAG00000007496)	ABLIM2 (ENSCLAG00000008762)	AFAP1 (ENSCLAG00000011637)	SORCS2 (ENSCLAG00000008556)	PSAPL1 (ENSCLAG00000018086)
Naked mole-rat female	MODERN SPECIES	1	LETM1 (ENSHGLG00000004719)	ENSHGLG00000044127	NELFA (ENSHGLG00000004622)	ENSHGLG00000020481	ENSHGLG00000010063 #7	POLN (ENSHGLG00000009000) #9	HAUS3 (ENSHGLG00000051007) #11	ENSHGLG00000047915	RNF4 (ENSHGLG00000046605) #15	ENSHGLG00000006269	ENSHGLG00000037168	TNIP2 (ENSHGLG00000005230) #17	SH3BP2 (ENSHGLG00000005188) #18	ADD1 (ENSHGLG00000005103) #19	ENSHGLG00000005051	GRK4 (ENSHGLG00000016893) #22	ENSHGLG00000048089	HTT (ENSHGLG00000014813) #23	MSANTD1 (ENSHGLG00000015087) #24	ENSHGLG00000016876 #25	ENSHGLG00000016854 #26	DOK7 (ENSHGLG00000018845) #27	ENSHGLG00000019431 #28	ENSHGLG00000041494	ENSHGLG00000021093	ENSHGLG00000038773	ENSHGLG00000013817	TRMT44 (ENSHGLG00000014808)	ACOX3 (ENSHGLG00000014645)	HTRA3 (ENSHGLG00000014617)	SH3TC1 (ENSHGLG00000014578)
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Marmotini	ANCESTRAL SPECIES	26	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.o #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Marmotini_b	ANCESTRAL SPECIES	33	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318.o #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Arctic ground squirrel	MODERN SPECIES	154					HAUS3 (ENSUPAG00010005760) #11	MXD4 (ENSUPAG00010005747) #12	ZFYVE28 (ENSUPAG00010005731) #13	CFAP99 (ENSUPAG00010005640) #14	RNF4 (ENSUPAG00010005616) #15	FAM193A (ENSUPAG00010005579) #16	TNIP2 (ENSUPAG00010005563) #17	SH3BP2 (ENSUPAG00010005541) #18	ADD1 (ENSUPAG00010005437) #19	ENSUPAG00010005416	NOP14 (ENSUPAG00010005404) #21	GRK4 (ENSUPAG00010005384) #22	HTT (ENSUPAG00010005314) #23	MSANTD1 (ENSUPAG00010005291) #24	RGS12 (ENSUPAG00010005196) #25	HGFAC (ENSUPAG00010005168) #26	DOK7 (ENSUPAG00010005159) #27	LRPAP1 (ENSUPAG00010005144) #28	ADRA2C (ENSUPAG00010005139)	HMX1 (ENSUPAG00010005133)	CPZ (ENSUPAG00010005113)	TRMT44 (ENSUPAG00010005096)	ACOX3 (ENSUPAG00010005046)	HTRA3 (ENSUPAG00010005039)	SH3TC1 (ENSUPAG00010005003)	ABLIM2 (ENSUPAG00010004675)	AFAP1 (ENSUPAG00010004645)
Squirrel	MODERN SPECIES	77	NSD2 (ENSSTOG00000003369)	NELFA (ENSSTOG00000003421)	ENSSTOG00000024159 #8	POLN (ENSSTOG00000001059) #9	HAUS3 (ENSSTOG00000020375) #11	MXD4 (ENSSTOG00000028770) #12	ZFYVE28 (ENSSTOG00000012220) #13	CFAP99 (ENSSTOG00000032892) #14	ENSSTOG00000011101 #15	FAM193A (ENSSTOG00000007426) #16	TNIP2 (ENSSTOG00000007444) #17	SH3BP2 (ENSSTOG00000028939) #18	ADD1 (ENSSTOG00000009726) #19	ENSSTOG00000025349	NOP14 (ENSSTOG00000009739) #21	GRK4 (ENSSTOG00000009753) #22	HTT (ENSSTOG00000009766) #23	MSANTD1 (ENSSTOG00000001629) #24	RGS12 (ENSSTOG00000022380) #25	HGFAC (ENSSTOG00000025456) #26	DOK7 (ENSSTOG00000004961) #27	LRPAP1 (ENSSTOG00000002323) #28	HMX1 (ENSSTOG00000034792)	CPZ (ENSSTOG00000027638)	TRMT44 (ENSSTOG00000014057)	ACOX3 (ENSSTOG00000016342)	HTRA3 (ENSSTOG00000021150)	SH3TC1 (ENSSTOG00000020377)	ABLIM2 (ENSSTOG00000024265)	AFAP1 (ENSSTOG00000023755)	SORCS2 (ENSSTOG00000021488)
Alpin marmot	MODERN SPECIES	9	NSD2 (ENSMMMG00000010052)	NELFA (ENSMMMG00000010244)	ENSMMMG00000010260 #8	POLN (ENSMMMG00000010281) #9	HAUS3 (ENSMMMG00000010462) #11	MXD4 (ENSMMMG00000010466) #12	ZFYVE28 (ENSMMMG00000010480) #13	CFAP99 (ENSMMMG00000010512) #14	RNF4 (ENSMMMG00000010533) #15	FAM193A (ENSMMMG00000010560) #16	TNIP2 (ENSMMMG00000010616) #17	SH3BP2 (ENSMMMG00000010638) #18	ADD1 (ENSMMMG00000010678) #19	ENSMMMG00000012548	NOP14 (ENSMMMG00000012574) #21	GRK4 (ENSMMMG00000012594) #22	HTT (ENSMMMG00000012619) #23	MSANTD1 (ENSMMMG00000012701) #24	RGS12 (ENSMMMG00000012736) #25	HGFAC (ENSMMMG00000013025) #26	LRPAP1 (ENSMMMG00000013053) #28	ADRA2C (ENSMMMG00000014251)	CPZ (ENSMMMG00000014261)	TRMT44 (ENSMMMG00000014276)	ACOX3 (ENSMMMG00000014316)	HTRA3 (ENSMMMG00000014366)	SH3TC1 (ENSMMMG00000014397)	ABLIM2 (ENSMMMG00000014483)	AFAP1 (ENSMMMG00000014805)	SORCS2 (ENSMMMG00000014836)	GRPEL1 (ENSMMMG00000014999)
Eurasian red squirrel	MODERN SPECIES	18	ENSSVLG00005018048	ENSSVLG00005018005	POLN (ENSSVLG00005017739) #9	HAUS3 (ENSSVLG00005017655) #11	MXD4 (ENSSVLG00005017609) #12	ENSSVLG00005017576 #13	ENSSVLG00005017470 #13	CFAP99 (ENSSVLG00005017288) #14	RNF4 (ENSSVLG00005017190) #15	FAM193A (ENSSVLG00005016851) #16	TNIP2 (ENSSVLG00005016767) #17	SH3BP2 (ENSSVLG00005016520) #18	ADD1 (ENSSVLG00005016341) #19	ENSSVLG00005016233	NOP14 (ENSSVLG00005016178) #21	GRK4 (ENSSVLG00005015841) #22	HTT (ENSSVLG00005015171) #23	MSANTD1 (ENSSVLG00005015035) #24	RGS12 (ENSSVLG00005014175) #25	HGFAC (ENSSVLG00005013667) #26	DOK7 (ENSSVLG00005013571) #27	LRPAP1 (ENSSVLG00005013407) #28	ADRA2C (ENSSVLG00005013315)	HMX1 (ENSSVLG00005013295)	CPZ (ENSSVLG00005013141)	TRMT44 (ENSSVLG00005012786)	ACOX3 (ENSSVLG00005012401)	HTRA3 (ENSSVLG00005012341)	SH3TC1 (ENSSVLG00005012110)	ABLIM2 (ENSSVLG00005010614)	AFAP1 (ENSSVLG00005010402)
Lagomorpha	ANCESTRAL SPECIES	187			ENSGT00940000157429	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24
Rabbit	MODERN SPECIES	529	ENSOCUG00000033780	ENSOCUG00000005245	ENSOCUG00000027729 #8	POLN (ENSOCUG00000005626) #9	HAUS3 (ENSOCUG00000021362) #11	MXD4 (ENSOCUG00000005063) #12	ENSOCUG00000004377 #13	ENSOCUG00000033870	CFAP99 (ENSOCUG00000036986) #14	ENSOCUG00000004998 #15	FAM193A (ENSOCUG00000017730) #16	TNIP2 (ENSOCUG00000010033) #17	SH3BP2 (ENSOCUG00000000161) #18	ADD1 (ENSOCUG00000024333) #19	NOP14 (ENSOCUG00000004725) #21	GRK4 (ENSOCUG00000005838) #22	HTT (ENSOCUG00000009805) #23	MSANTD1 (ENSOCUG00000023300) #24
Pika	MODERN SPECIES	839																GRK4 (ENSOPRG00000002372) #22
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160151 #22
Common shrew	MODERN SPECIES	1802																ENSSARG00000013101 #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Suina	ANCESTRAL SPECIES	33	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Chacoan peccary	MODERN SPECIES	967					MXD4 (ENSCWAG00000019836) #12	ENSCWAG00000019856 #13	ENSCWAG00000019870 #13	CFAP99 (ENSCWAG00000019899) #14	RNF4 (ENSCWAG00000019952) #15	FAM193A (ENSCWAG00000020075) #16	TNIP2 (ENSCWAG00000020259) #17	SH3BP2 (ENSCWAG00000020282) #18	ADD1 (ENSCWAG00000020365) #19	ENSCWAG00000020420	NOP14 (ENSCWAG00000020518) #21	GRK4 (ENSCWAG00000020571) #22	HTT (ENSCWAG00000020675) #23	MSANTD1 (ENSCWAG00000020872) #24	ENSCWAG00000020900 #25
Pig	MODERN SPECIES	16	NELFA (ENSSSCG00000008681)	C4orf48 (ENSSSCG00000063120) #7	NAT8L (ENSSSCG00000033541) #8	POLN (ENSSSCG00000027718) #9	MXD4 (ENSSSCG00000008687) #12	ZFYVE28 (ENSSSCG00000008689) #13	CFAP99 (ENSSSCG00000034633) #14	ENSSSCG00000054601	RNF4 (ENSSSCG00000008690) #15	FAM193A (ENSSSCG00000029745) #16	TNIP2 (ENSSSCG00000008691) #17	SH3BP2 (ENSSSCG00000022004) #18	ADD1 (ENSSSCG00000008692) #19	MFSD10 (ENSSSCG00000008695) #20	NOP14 (ENSSSCG00000008693) #21	GRK4 (ENSSSCG00000008694) #22	HTT (ENSSSCG00000008697) #23	MSANTD1 (ENSSSCG00000058478) #24	RGS12 (ENSSSCG00000008698) #25	HGFAC (ENSSSCG00000008700) #26	LRPAP1 (ENSSSCG00000008701) #28	ADRA2C (ENSSSCG00000008703)	HMX1 (ENSSSCG00000008720)	CPZ (ENSSSCG00000032151)	TRMT44 (ENSSSCG00000033873)	ACOX3 (ENSSSCG00000008724)	HTRA3 (ENSSSCG00000008723)	SH3TC1 (ENSSSCG00000008722)	ABLIM2 (ENSSSCG00000008721)	AFAP1 (ENSSSCG00000023907)	SORCS2 (ENSSSCG00000037539)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Camelidae	ANCESTRAL SPECIES	22	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT00940000164031	ENSGT01030000234563.b.a.a
Arabian camel	MODERN SPECIES	11	C4orf48 (ENSCDRG00005004867) #7	ENSCDRG00005004858 #8	POLN (ENSCDRG00005004833) #9	HAUS3 (ENSCDRG00005004806) #11	MXD4 (ENSCDRG00005004719) #12	ENSCDRG00005004698 #13	ENSCDRG00005004685 #13	CFAP99 (ENSCDRG00005004620) #14	RNF4 (ENSCDRG00005004592) #15	FAM193A (ENSCDRG00005004529) #16	TNIP2 (ENSCDRG00005004514) #17	SH3BP2 (ENSCDRG00005004400) #18	ADD1 (ENSCDRG00005004116) #19	MFSD10 (ENSCDRG00005003971) #20	NOP14 (ENSCDRG00005003889) #21	GRK4 (ENSCDRG00005003589) #22	HTT (ENSCDRG00005002844) #23	MSANTD1 (ENSCDRG00005002625) #24	RGS12 (ENSCDRG00005002591) #25	HGFAC (ENSCDRG00005002564) #26	DOK7 (ENSCDRG00005002538) #27	LRPAP1 (ENSCDRG00005002510) #28	CPZ (ENSCDRG00005002249)	TRMT44 (ENSCDRG00005002204)	ACOX3 (ENSCDRG00005002157)	HTRA3 (ENSCDRG00005002125)	SH3TC1 (ENSCDRG00005002064)	ABLIM2 (ENSCDRG00005001968)	AFAP1 (ENSCDRG00005001874)	PSAPL1 (ENSCDRG00005001861)	SORCS2 (ENSCDRG00005001824)
Artiodactyla_b	ANCESTRAL SPECIES	30	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Pecora	ANCESTRAL SPECIES	15	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Percora_a	ANCESTRAL SPECIES	18	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570
Bovidae	ANCESTRAL SPECIES	18	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828.b	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570
Caprinae	ANCESTRAL SPECIES	13	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904.k #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863.i #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828.b	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Rambouillet Sheep	MODERN SPECIES	22	NAT8L (ENSOARG00020023001) #8	ENSOARG00020022986	POLN (ENSOARG00020022890) #9	HAUS3 (ENSOARG00020022851) #11	MXD4 (ENSOARG00020022801) #12	ENSOARG00020022734 #13	ENSOARG00020022674 #13	CFAP99 (ENSOARG00020022601) #14	RNF4 (ENSOARG00020022503) #15	FAM193A (ENSOARG00020022278) #16	TNIP2 (ENSOARG00020022129) #17	SH3BP2 (ENSOARG00020021902) #18	ADD1 (ENSOARG00020021785) #19	ENSOARG00020021647	NOP14 (ENSOARG00020021463) #21	GRK4 (ENSOARG00020021071) #22	HTT (ENSOARG00020020229) #23	MSANTD1 (ENSOARG00020020116) #24	RGS12 (ENSOARG00020019415) #25	HGFAC (ENSOARG00020019211) #26	DOK7 (ENSOARG00020019127) #27	LRPAP1 (ENSOARG00020019028) #28	ADRA2C (ENSOARG00020018999)	HMX1 (ENSOARG00020018963)	CPZ (ENSOARG00020018772)	ENSOARG00020018563	ACOX3 (ENSOARG00020018378)	HTRA3 (ENSOARG00020018235)	SH3TC1 (ENSOARG00020017981)	ABLIM2 (ENSOARG00020012027)	AFAP1 (ENSOARG00020011241)
Goat	MODERN SPECIES	25	NELFA (ENSCHIG00000018283)	C4orf48 (ENSCHIG00000002106) #7	NAT8L (ENSCHIG00000015781) #8	ENSCHIG00000007680	ENSCHIG00000014089 #11	MXD4 (ENSCHIG00000024119) #12	ZFYVE28 (ENSCHIG00000011539) #13	CFAP99 (ENSCHIG00000015798) #14	RNF4 (ENSCHIG00000003435) #15	FAM193A (ENSCHIG00000022591) #16	TNIP2 (ENSCHIG00000013890) #17	SH3BP2 (ENSCHIG00000011116) #18	ADD1 (ENSCHIG00000023797) #19	ENSCHIG00000014284	NOP14 (ENSCHIG00000026702) #21	GRK4 (ENSCHIG00000021914) #22	ENSCHIG00000026634 #23	NKX1-1 (ENSCHIG00000025512)	UVSSA (ENSCHIG00000019552)	MAEA (ENSCHIG00000025892)	CTBP1 (ENSCHIG00000025244)	SPON2 (ENSCHIG00000018579)	ENSCHIG00000012949	IDUA (ENSCHIG00000025809)	SLC26A1 (ENSCHIG00000004233)	DGKQ (ENSCHIG00000022963)	CPLX1 (ENSCHIG00000012118)	PCGF3 (ENSCHIG00000017751)	SLC49A3 (ENSCHIG00000024366)	ENSCHIG00000013611	PDE6B (ENSCHIG00000020394)
Bovinae	ANCESTRAL SPECIES	15	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00960000190697	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.t #25	ENSGT00940000159741.s #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT01100000263828.b	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423
Bos	ANCESTRAL SPECIES	15	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.t #25	ENSGT00940000159741.s #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855.c #28	ENSGT01100000263828.b	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570
Bos_b	ANCESTRAL SPECIES	14	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.t #25	ENSGT00940000159741.s #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855.c #28	ENSGT01100000263828.b	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570
Hybrid Bos Indicus	MODERN SPECIES	25	NAT8L (ENSBIXG00005008838) #8	ENSBIXG00005006191	POLN (ENSBIXG00005000322) #9	ENSBIXG00005008965 #11	MXD4 (ENSBIXG00005008980) #12	ENSBIXG00005009002 #13	ENSBIXG00005009025 #13	CFAP99 (ENSBIXG00005009067) #14	RNF4 (ENSBIXG00005005461) #15	FAM193A (ENSBIXG00005009399) #16	TNIP2 (ENSBIXG00005009483) #17	SH3BP2 (ENSBIXG00005009588) #18	ADD1 (ENSBIXG00005009740) #19	ENSBIXG00005009806	NOP14 (ENSBIXG00005009826) #21	GRK4 (ENSBIXG00005010030) #22	HTT (ENSBIXG00005006419) #23	MSANTD1 (ENSBIXG00005010285) #24	RGS12 (ENSBIXG00005010377) #25	DOK7 (ENSBIXG00005010412) #27	ENSBIXG00005010446 #28	ENSBIXG00005010466	ADRA2C (ENSBIXG00005010512)	HMX1 (ENSBIXG00005010552)	CPZ (ENSBIXG00005000693)	TRMT44 (ENSBIXG00005010670)	ACOX3 (ENSBIXG00005010819)	HTRA3 (ENSBIXG00005000973)	SH3TC1 (ENSBIXG00005000986)	ABLIM2 (ENSBIXG00005001027)	ENSBIXG00005001052
Cow	MODERN SPECIES	25	NELFA (ENSBTAG00000017921)	C6H4orf48 (ENSBTAG00000031395) #7	ENSBTAG00000053874 #8	POLN (ENSBTAG00000017296) #9	HAUS3 (ENSBTAG00000024787) #11	MXD4 (ENSBTAG00000015209) #12	ZFYVE28 (ENSBTAG00000006683) #13	CFAP99 (ENSBTAG00000054376) #14	RNF4 (ENSBTAG00000027453) #15	FAM193A (ENSBTAG00000009744) #16	TNIP2 (ENSBTAG00000015126)	SH3BP2 (ENSBTAG00000013996) #18	ADD1 (ENSBTAG00000021128) #19	MFSD10 (ENSBTAG00000021130)	NOP14 (ENSBTAG00000001504) #21	GRK4 (ENSBTAG00000001505) #22	ENSBTAG00000054535	HTT (ENSBTAG00000001506) #23	MSANTD1 (ENSBTAG00000003776) #24	ENSBTAG00000052058 #25	ENSBTAG00000052328 #25	ENSBTAG00000016714	HGFAC (ENSBTAG00000017335) #26	DOK7 (ENSBTAG00000009742) #27	LRPAP1 (ENSBTAG00000000073) #28	ADRA2C (ENSBTAG00000045994)	HMX1 (ENSBTAG00000031197)	CPZ (ENSBTAG00000014803)	TRMT44 (ENSBTAG00000004797)	ACOX3 (ENSBTAG00000004893)	HTRA3 (ENSBTAG00000047613)
Bos_a	ANCESTRAL SPECIES	61	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741.s #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855.c #28	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT00940000164031
Domestic yak	MODERN SPECIES	25	ENSBGRG00000016908 #8	POLN (ENSBGRG00000016638) #9	ENSBGRG00000016598	HAUS3 (ENSBGRG00000016524) #11	ENSBGRG00000016319 #12	ENSBGRG00000016224 #13	ENSBGRG00000016089 #13	CFAP99 (ENSBGRG00000015852) #14	RNF4 (ENSBGRG00000015725) #15	FAM193A (ENSBGRG00000015247) #16	TNIP2 (ENSBGRG00000015105) #17	SH3BP2 (ENSBGRG00000014755) #18	ADD1 (ENSBGRG00000014564) #19	ENSBGRG00000014329	NOP14 (ENSBGRG00000014192) #21	GRK4 (ENSBGRG00000013724) #22	HTT (ENSBGRG00000008977) #23	MSANTD1 (ENSBGRG00000008700) #24	ENSBGRG00000008554 #25	HGFAC (ENSBGRG00000008451) #26	DOK7 (ENSBGRG00000008376) #27	LRPAP1 (ENSBGRG00000008251) #28	ENSBGRG00000008212	HMX1 (ENSBGRG00000010610)	CPZ (ENSBGRG00000010490)	TRMT44 (ENSBGRG00000010431)	ACOX3 (ENSBGRG00000009913)	HTRA3 (ENSBGRG00000009786)	SH3TC1 (ENSBGRG00000009550)	ABLIM2 (ENSBGRG00000008458)	AFAP1 (ENSBGRG00000008121)
Wild yak	MODERN SPECIES	651						HAUS3 (ENSBMUG00000024829) #11	ENSBMUG00000024833 #12	ENSBMUG00000024846 #13	CFAP99 (ENSBMUG00000024856) #14	RNF4 (ENSBMUG00000024879) #15	FAM193A (ENSBMUG00000024969) #16	ENSBMUG00000024982	SH3BP2 (ENSBMUG00000024994) #18	ADD1 (ENSBMUG00000025041) #19	NOP14 (ENSBMUG00000025142) #21	GRK4 (ENSBMUG00000025302) #22	HTT (ENSBMUG00000026120) #23	MSANTD1 (ENSBMUG00000026206) #24
American bison	MODERN SPECIES	1988														ENSBBBG00000004613	NOP14 (ENSBBBG00000018601) #21	GRK4 (ENSBBBG00000018548) #22	ENSBBBG00000018450	ENSBBBG00000018444 #23	MSANTD1 (ENSBBBG00000018436) #24	ENSBBBG00000006965 #25	ENSBBBG00000018405 #25	HGFAC (ENSBBBG00000018371) #26	ENSBBBG00000018258 #27
Siberian musk deer	MODERN SPECIES	354	C4orf48 (ENSMMSG00000011837) #7	NAT8L (ENSMMSG00000011858) #8	POLN (ENSMMSG00000011904) #9	HAUS3 (ENSMMSG00000011973) #11	MXD4 (ENSMMSG00000012003) #12	ENSMMSG00000012038 #13	ENSMMSG00000012065 #13	CFAP99 (ENSMMSG00000012099) #14	RNF4 (ENSMMSG00000015797) #15	FAM193A (ENSMMSG00000015827) #16	TNIP2 (ENSMMSG00000015869) #17	SH3BP2 (ENSMMSG00000015976) #18	ADD1 (ENSMMSG00000016098) #19	ENSMMSG00000016223	NOP14 (ENSMMSG00000016305) #21	GRK4 (ENSMMSG00000016395) #22	HTT (ENSMMSG00000016557) #23	MSANTD1 (ENSMMSG00000017137) #24	ENSMMSG00000017153 #25
Yarkand deer	MODERN SPECIES	29	NELFA (ENSCHYG00000025867)	NAT8L (ENSCHYG00000025851) #8	POLN (ENSCHYG00000025750) #9	HAUS3 (ENSCHYG00000025719) #11	ENSCHYG00000025702 #13	ENSCHYG00000025686	CFAP99 (ENSCHYG00000025667) #14	RNF4 (ENSCHYG00000025555) #15	ENSCHYG00000025523	FAM193A (ENSCHYG00000025484) #16	TNIP2 (ENSCHYG00000025444) #17	SH3BP2 (ENSCHYG00000025298) #18	ENSCHYG00000024729 #19	ENSCHYG00000024585	NOP14 (ENSCHYG00000024534) #21	GRK4 (ENSCHYG00000024289) #22	HTT (ENSCHYG00000023889) #23	MSANTD1 (ENSCHYG00000023764) #24	RGS12 (ENSCHYG00000023405) #25	DOK7 (ENSCHYG00000023263) #27	ENSCHYG00000023167 #28	ENSCHYG00000023148	CPZ (ENSCHYG00000023015)	TRMT44 (ENSCHYG00000022951)	ACOX3 (ENSCHYG00000022776)	HTRA3 (ENSCHYG00000022643)	SH3TC1 (ENSCHYG00000022378)	ABLIM2 (ENSCHYG00000020931)	AFAP1 (ENSCHYG00000020461)	ENSCHYG00000020420	PSAPL1 (ENSCHYG00000020393)
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Odontoceti_a	ANCESTRAL SPECIES	22	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386.d #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386.d #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386.d #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Narwhal	MODERN SPECIES	307	C4orf48 (ENSMMNG00015008532) #7	ENSMMNG00015008518 #8	POLN (ENSMMNG00015008466) #9	HAUS3 (ENSMMNG00015008433) #11	MXD4 (ENSMMNG00015008416) #12	ENSMMNG00015008390 #13	ENSMMNG00015008379 #13	CFAP99 (ENSMMNG00015008357) #14	RNF4 (ENSMMNG00015008314) #15	FAM193A (ENSMMNG00015008181) #16	TNIP2 (ENSMMNG00015008095) #17	SH3BP2 (ENSMMNG00015008021) #18	ADD1 (ENSMMNG00015007965) #19	MFSD10 (ENSMMNG00015007848) #20	NOP14 (ENSMMNG00015007703) #21	ENSMMNG00015007674 #22	HTT (ENSMMNG00015007552) #23	MSANTD1 (ENSMMNG00015007459) #24	RGS12 (ENSMMNG00015007391) #25	HGFAC (ENSMMNG00015007314) #26	DOK7 (ENSMMNG00015007268) #27	LRPAP1 (ENSMMNG00015007240) #28	ADRA2C (ENSMMNG00015007215)	HMX1 (ENSMMNG00015007199)	CPZ (ENSMMNG00015007134)	TRMT44 (ENSMMNG00015007067)	ACOX3 (ENSMMNG00015006993)	HTRA3 (ENSMMNG00015006949)	SH3TC1 (ENSMMNG00015006864)	ABLIM2 (ENSMMNG00015006708)	AFAP1 (ENSMMNG00015006549)
Beluga whale	MODERN SPECIES	77	C4orf48 (ENSDLEG00000016453) #7	NAT8L (ENSDLEG00000016443) #8	POLN (ENSDLEG00000016047) #9	HAUS3 (ENSDLEG00000016006) #11	MXD4 (ENSDLEG00000015987) #12	ENSDLEG00000015973	ENSDLEG00000015957 #13	CFAP99 (ENSDLEG00000015790) #14	RNF4 (ENSDLEG00000015767) #15	FAM193A (ENSDLEG00000015632) #16	TNIP2 (ENSDLEG00000015610) #17	SH3BP2 (ENSDLEG00000015385) #18	ADD1 (ENSDLEG00000015327) #19	ENSDLEG00000015260	NOP14 (ENSDLEG00000014931) #21	ENSDLEG00000014878 #22	ENSDLEG00000014875	HTT (ENSDLEG00000011397) #23	MSANTD1 (ENSDLEG00000011054) #24	RGS12 (ENSDLEG00000011012) #25	HGFAC (ENSDLEG00000019464) #26	DOK7 (ENSDLEG00000019424) #27	ENSDLEG00000019421 #28	ADRA2C (ENSDLEG00000019419)	HMX1 (ENSDLEG00000019416)	CPZ (ENSDLEG00000019412)	TRMT44 (ENSDLEG00000019402)	ACOX3 (ENSDLEG00000019342)	HTRA3 (ENSDLEG00000019321)	SH3TC1 (ENSDLEG00000019312)	ABLIM2 (ENSDLEG00000019228)
Sperm whale	MODERN SPECIES	18	NAT8L (ENSPCTG00005006259) #8	ENSPCTG00005006248	POLN (ENSPCTG00005006144) #9	HAUS3 (ENSPCTG00005006113) #11	ENSPCTG00005019696	MXD4 (ENSPCTG00005019644) #12	ENSPCTG00005019596 #13	ENSPCTG00005019514 #13	CFAP99 (ENSPCTG00005019388) #14	RNF4 (ENSPCTG00005019311) #15	FAM193A (ENSPCTG00005019111) #16	ENSPCTG00005018969	SH3BP2 (ENSPCTG00005018670) #18	ADD1 (ENSPCTG00005018610) #19	ENSPCTG00005018578 #21	ENSPCTG00005018521 #22	ENSPCTG00005018492	HTT (ENSPCTG00005017818) #23	MSANTD1 (ENSPCTG00005017696) #24	RGS12 (ENSPCTG00005017623) #25	HGFAC (ENSPCTG00005017292) #26	DOK7 (ENSPCTG00005017177) #27	LRPAP1 (ENSPCTG00005017137) #28	ADRA2C (ENSPCTG00005017090)	HMX1 (ENSPCTG00005017053)	CPZ (ENSPCTG00005016872)	TRMT44 (ENSPCTG00005016606)	ACOX3 (ENSPCTG00005016523)	ENSPCTG00005016460	ENSPCTG00005016281	AFAP1 (ENSPCTG00005015990)
Blue whale	MODERN SPECIES	16	NELFA (ENSBMSG00010009791)	C4orf48 (ENSBMSG00010009769) #7	NAT8L (ENSBMSG00010009755) #8	POLN (ENSBMSG00010009707) #9	HAUS3 (ENSBMSG00010009672) #11	MXD4 (ENSBMSG00010009650) #12	ENSBMSG00010009628 #13	CFAP99 (ENSBMSG00010009605) #14	RNF4 (ENSBMSG00010009582) #15	FAM193A (ENSBMSG00010009552) #16	TNIP2 (ENSBMSG00010009509) #17	SH3BP2 (ENSBMSG00010010433) #18	ADD1 (ENSBMSG00010010402) #19	ENSBMSG00010010354	NOP14 (ENSBMSG00010010268) #21	GRK4 (ENSBMSG00010009184) #22	ENSBMSG00010009064	HTT (ENSBMSG00010009010) #23	MSANTD1 (ENSBMSG00010008984) #24	RGS12 (ENSBMSG00010008788) #25	HGFAC (ENSBMSG00010008732) #26	DOK7 (ENSBMSG00010008705) #27	LRPAP1 (ENSBMSG00010008696) #28	ADRA2C (ENSBMSG00010008691)	HMX1 (ENSBMSG00010008686)	CPZ (ENSBMSG00010008653)	TRMT44 (ENSBMSG00010008602)	ACOX3 (ENSBMSG00010008584)	HTRA3 (ENSBMSG00010008566)	SH3TC1 (ENSBMSG00010008538)	ABLIM2 (ENSBMSG00010007465)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Carnivora	ANCESTRAL SPECIES	5	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Mustelinae	ANCESTRAL SPECIES	69	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00960000192929	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
American mink	MODERN SPECIES	139	NAT8L (ENSNVIG00000000559) #8	POLN (ENSNVIG00000000575) #9	HAUS3 (ENSNVIG00000000614) #11	MXD4 (ENSNVIG00000000639) #12	ENSNVIG00000000648 #13	ENSNVIG00000000660 #13	CFAP99 (ENSNVIG00000000667) #14	RNF4 (ENSNVIG00000000683) #15	FAM193A (ENSNVIG00000000739) #16	TNIP2 (ENSNVIG00000000789) #17	SH3BP2 (ENSNVIG00000000831) #18	ENSNVIG00000000898	ADD1 (ENSNVIG00000000906) #19	MFSD10 (ENSNVIG00000001113) #20	NOP14 (ENSNVIG00000001159) #21	GRK4 (ENSNVIG00000001210) #22	HTT (ENSNVIG00000001469) #23	MSANTD1 (ENSNVIG00000005202) #24	ENSNVIG00000005214 #25	ENSNVIG00000005232	HGFAC (ENSNVIG00000005255) #26	ENSNVIG00000005312 #27	LRPAP1 (ENSNVIG00000005321) #28	HMX1 (ENSNVIG00000005343)	CPZ (ENSNVIG00000005357)	TRMT44 (ENSNVIG00000005444)	ACOX3 (ENSNVIG00000005462)	HTRA3 (ENSNVIG00000005532)	SH3TC1 (ENSNVIG00000005580)	ENSNVIG00000005654	ABLIM2 (ENSNVIG00000005686)
Ferret	MODERN SPECIES	334	NSD2 (ENSMPUG00000011036)	NELFA (ENSMPUG00000011031)	ENSMPUG00000011023	NAT8L (ENSMPUG00000011019) #8	HAUS3 (ENSMPUG00000011011) #11	MXD4 (ENSMPUG00000010989) #12	ZFYVE28 (ENSMPUG00000010981) #13	CFAP99 (ENSMPUG00000010977) #14	RNF4 (ENSMPUG00000010957) #15	FAM193A (ENSMPUG00000010949) #16	TNIP2 (ENSMPUG00000010947) #17	SH3BP2 (ENSMPUG00000010942) #18	ADD1 (ENSMPUG00000010933) #19	MFSD10 (ENSMPUG00000010909) #20	NOP14 (ENSMPUG00000010899) #21	GRK4 (ENSMPUG00000010706) #22	HTT (ENSMPUG00000010698) #23	MSANTD1 (ENSMPUG00000010693) #24	RGS12 (ENSMPUG00000010690) #25	HGFAC (ENSMPUG00000010585) #26	DOK7 (ENSMPUG00000010576) #27	LRPAP1 (ENSMPUG00000010570) #28	ENSMPUG00000010565	CPZ (ENSMPUG00000010557)	TRMT44 (ENSMPUG00000010536)	ACOX3 (ENSMPUG00000010527)	HTRA3 (ENSMPUG00000010519)	SH3TC1 (ENSMPUG00000010511)	ABLIM2 (ENSMPUG00000010499)	AFAP1 (ENSMPUG00000010492)	SORCS2 (ENSMPUG00000010476)
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES	29	ENSGT00390000005342	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151.g #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a
Ursus	ANCESTRAL SPECIES	105	ENSGT00940000157429	ENSGT00390000005342	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00940000164052	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151.g #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00390000005589.a.a
Polar bear	MODERN SPECIES	111	ENSUMAG00000006404	NELFA (ENSUMAG00000006418)	ENSUMAG00000006510 #8	POLN (ENSUMAG00000006517) #9	HAUS3 (ENSUMAG00000006573) #11	ENSUMAG00000006575 #12	ZFYVE28 (ENSUMAG00000006582) #13	CFAP99 (ENSUMAG00000006604) #14	RNF4 (ENSUMAG00000006614) #15	FAM193A (ENSUMAG00000006616) #16	ENSUMAG00000006620	SH3BP2 (ENSUMAG00000006627) #18	ENSUMAG00000006661	ENSUMAG00000006673	NOP14 (ENSUMAG00000006697) #21	GRK4 (ENSUMAG00000006953) #22	HTT (ENSUMAG00000008320) #23	MSANTD1 (ENSUMAG00000009714) #24	RGS12 (ENSUMAG00000009717) #25	HGFAC (ENSUMAG00000009730) #26	LRPAP1 (ENSUMAG00000009747) #28	CPZ (ENSUMAG00000009774)	TRMT44 (ENSUMAG00000009816)	ACOX3 (ENSUMAG00000009883)	HTRA3 (ENSUMAG00000010208)	SH3TC1 (ENSUMAG00000010239)	ABLIM2 (ENSUMAG00000010333)	AFAP1 (ENSUMAG00000010787)	SORCS2 (ENSUMAG00000010954)	GRPEL1 (ENSUMAG00000010977)	TADA2B (ENSUMAG00000010984)
American black bear	MODERN SPECIES	3479														MFSD10 (ENSUAMG00000016307) #20	NOP14 (ENSUAMG00000016302) #21	ENSUAMG00000016299 #22
Giant Panda	MODERN SPECIES	2	LETM1 (ENSAMEG00000014210)	NSD2 (ENSAMEG00000014221)	NELFA (ENSAMEG00000014240)	NAT8L (ENSAMEG00000014278) #8	POLN (ENSAMEG00000014290) #9	HAUS3 (ENSAMEG00000014332) #11	MXD4 (ENSAMEG00000014340) #12	ZFYVE28 (ENSAMEG00000014349) #13	CFAP99 (ENSAMEG00000028653) #14	FAM193A (ENSAMEG00000014383) #16	TNIP2 (ENSAMEG00000014405) #17	SH3BP2 (ENSAMEG00000014415) #18	ADD1 (ENSAMEG00000014449) #19	MFSD10 (ENSAMEG00000014523) #20	NOP14 (ENSAMEG00000014547) #21	GRK4 (ENSAMEG00000014586) #22	HTT (ENSAMEG00000014658) #23	MSANTD1 (ENSAMEG00000027262) #24	RGS12 (ENSAMEG00000014786) #25	HGFAC (ENSAMEG00000014815) #26	DOK7 (ENSAMEG00000024474) #27	ENSAMEG00000014853 #28	ENSAMEG00000014899	TRMT44 (ENSAMEG00000014919)	ACOX3 (ENSAMEG00000014936)	HTRA3 (ENSAMEG00000014991)	SH3TC1 (ENSAMEG00000025685)	ABLIM2 (ENSAMEG00000015072)	AFAP1 (ENSAMEG00000006201)	SORCS2 (ENSAMEG00000006150)	GRPEL1 (ENSAMEG00000028793)
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000160151.h #22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000160151.h #22
American black bear	MODERN SPECIES	7960																ENSUAMG00000007909 #22
Canidae	ANCESTRAL SPECIES	21	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Red fox	MODERN SPECIES	1	ENSVVUG00000023827 #7	NAT8L (ENSVVUG00000023829) #8	POLN (ENSVVUG00000023835) #9	HAUS3 (ENSVVUG00000023845) #11	MXD4 (ENSVVUG00000023848) #12	ZFYVE28 (ENSVVUG00000023859) #13	CFAP99 (ENSVVUG00000023861) #14	RNF4 (ENSVVUG00000023864) #15	ENSVVUG00000023867	FAM193A (ENSVVUG00000023873) #16	TNIP2 (ENSVVUG00000023886) #17	SH3BP2 (ENSVVUG00000023905) #18	ADD1 (ENSVVUG00000023924) #19	MFSD10 (ENSVVUG00000023927) #20	NOP14 (ENSVVUG00000023936) #21	GRK4 (ENSVVUG00000023942) #22	ENSVVUG00000023970	HTT (ENSVVUG00000024096) #23	MSANTD1 (ENSVVUG00000024948) #24	RGS12 (ENSVVUG00000024952) #25	HGFAC (ENSVVUG00000024961) #26	DOK7 (ENSVVUG00000025017) #27	LRPAP1 (ENSVVUG00000025019) #28	CPZ (ENSVVUG00000025033)	TRMT44 (ENSVVUG00000025044)	ACOX3 (ENSVVUG00000025052)	HTRA3 (ENSVVUG00000025060)	SH3TC1 (ENSVVUG00000025067)	ABLIM2 (ENSVVUG00000025103)	AFAP1 (ENSVVUG00000000026)	SORCS2 (ENSVVUG00000000041)
Canis_lupus	ANCESTRAL SPECIES	23	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00950000183198.c.a.b.a.a	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Dog	MODERN SPECIES	22	NELFA (ENSCAFG00845012841)	C3H4orf48 (ENSCAFG00845012789) #7	NAT8L (ENSCAFG00845012758) #8	POLN (ENSCAFG00845012682) #9	MXD4 (ENSCAFG00845012610) #12	ZFYVE28 (ENSCAFG00845012527) #13	CFAP99 (ENSCAFG00845012463) #14	RNF4 (ENSCAFG00845012388) #15	FAM193A (ENSCAFG00845012303) #16	TNIP2 (ENSCAFG00845012210) #17	SH3BP2 (ENSCAFG00845012142) #18	ADD1 (ENSCAFG00845012015) #19	MFSD10 (ENSCAFG00845011850) #20	NOP14 (ENSCAFG00845011751) #21	ENSCAFG00845011720	GRK4 (ENSCAFG00845011404) #22	HTT (ENSCAFG00845011174) #23	HTT (ENSCAFG00845011109) #24	HGFAC (ENSCAFG00845011005) #25	HGFAC (ENSCAFG00845010920) #26	ENSCAFG00845010871	HGFAC (ENSCAFG00845010777) #27	LRPAP1 (ENSCAFG00845010689) #28	ENSCAFG00845010654	HMX1 (ENSCAFG00845010633)	CPZ (ENSCAFG00845010568)	TRMT44 (ENSCAFG00845010510)	ENSCAFG00845010480	ACOX3 (ENSCAFG00845010178)	HTRA3 (ENSCAFG00845010076)	SH3TC1 (ENSCAFG00845009957)
Dingo	MODERN SPECIES	138	C4orf48 (ENSCAFG00020012395) #7	NAT8L (ENSCAFG00020012398) #8	POLN (ENSCAFG00020012402) #9	HAUS3 (ENSCAFG00020012427) #11	MXD4 (ENSCAFG00020012430) #12	ZFYVE28 (ENSCAFG00020012447) #13	CFAP99 (ENSCAFG00020012449) #14	RNF4 (ENSCAFG00020012490) #15	FAM193A (ENSCAFG00020012546) #16	TNIP2 (ENSCAFG00020012703) #17	SH3BP2 (ENSCAFG00020012726) #18	ADD1 (ENSCAFG00020012740) #19	MFSD10 (ENSCAFG00020012765) #20	NOP14 (ENSCAFG00020012768) #21	ENSCAFG00020012776	ENSCAFG00020012780 #22	ENSCAFG00020012783	HTT (ENSCAFG00020012904) #23	MSANTD1 (ENSCAFG00020014619) #24	RGS12 (ENSCAFG00020014622) #25	HGFAC (ENSCAFG00020014624) #26	DOK7 (ENSCAFG00020014626) #27	LRPAP1 (ENSCAFG00020014629) #28	ADRA2C (ENSCAFG00020014633)	HMX1 (ENSCAFG00020014639)	CPZ (ENSCAFG00020014642)	TRMT44 (ENSCAFG00020014653)	ENSCAFG00020014681	ACOX3 (ENSCAFG00020014686)	HTRA3 (ENSCAFG00020014735)	SH3TC1 (ENSCAFG00020014736)
Felidae	ANCESTRAL SPECIES	4	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00950000183087.A.a.a.b.p	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Panthera	ANCESTRAL SPECIES	5	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00950000183087.A.a.a.b.p	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Tiger	MODERN SPECIES	303	C4orf48 (ENSPTIG00000016138) #7	POLN (ENSPTIG00000011746) #9	HAUS3 (ENSPTIG00000011163) #11	ENSPTIG00000010627 #13	ENSPTIG00000009881 #13	CFAP99 (ENSPTIG00000008222) #14	RNF4 (ENSPTIG00000019861) #15	FAM193A (ENSPTIG00000015747) #16	TNIP2 (ENSPTIG00000015248) #17	SH3BP2 (ENSPTIG00000011454) #18	ENSPTIG00000011214	ADD1 (ENSPTIG00000014981) #19	MFSD10 (ENSPTIG00000012030) #20	NOP14 (ENSPTIG00000007085) #21	ENSPTIG00000011764	GRK4 (ENSPTIG00000007372) #22	HTT (ENSPTIG00000016947) #23	RGS12 (ENSPTIG00000013667) #25	HGFAC (ENSPTIG00000011703) #26	ENSPTIG00000009272 #28
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00390000011904 #11	ENSGT00910000148326	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00950000183087.A.a.a.b.p	ENSGT00940000158581 #19	ENSGT00940000164295 #20	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
leopard	MODERN SPECIES	25	ENSPPRG00000004633 #8	HAUS3 (ENSPPRG00000007568) #11	MXD4 (ENSPPRG00000009897) #12	ENSPPRG00000012352 #13	CFAP99 (ENSPPRG00000013633) #14	RNF4 (ENSPPRG00000020972) #15	ENSPPRG00000022001	FAM193A (ENSPPRG00000023349) #16	TNIP2 (ENSPPRG00000022784) #17	SH3BP2 (ENSPPRG00000000297) #18	ENSPPRG00000000360	ADD1 (ENSPPRG00000009526) #19	MFSD10 (ENSPPRG00000010726) #20	NOP14 (ENSPPRG00000012848) #21	ENSPPRG00000001525	GRK4 (ENSPPRG00000004398) #22	HTT (ENSPPRG00000008717) #23	MSANTD1 (ENSPPRG00000010491) #24	RGS12 (ENSPPRG00000014281) #25	HGFAC (ENSPPRG00000020547) #26	DOK7 (ENSPPRG00000021690) #27	LRPAP1 (ENSPPRG00000022560) #28	ADRA2C (ENSPPRG00000023307)	HMX1 (ENSPPRG00000023236)	CPZ (ENSPPRG00000000157)	TRMT44 (ENSPPRG00000001613)	ACOX3 (ENSPPRG00000003521)	HTRA3 (ENSPPRG00000005071)	SH3TC1 (ENSPPRG00000005952)	ABLIM2 (ENSPPRG00000019420)	AFAP1 (ENSPPRG00000002919)
lion	MODERN SPECIES	4	ENSPLOG00000004384	MXD4 (ENSPLOG00000004376) #12	ENSPLOG00000004365 #13	ENSPLOG00000004349 #13	CFAP99 (ENSPLOG00000004314) #14	RNF4 (ENSPLOG00000004275) #15	ENSPLOG00000004250	FAM193A (ENSPLOG00000004221) #16	ENSPLOG00000004190	SH3BP2 (ENSPLOG00000004166) #18	ENSPLOG00000004143	ADD1 (ENSPLOG00000004119) #19	MFSD10 (ENSPLOG00000004084) #20	NOP14 (ENSPLOG00000003997) #21	ENSPLOG00000003978	GRK4 (ENSPLOG00000003900) #22	HTT (ENSPLOG00000003788) #23	MSANTD1 (ENSPLOG00000003674) #24	RGS12 (ENSPLOG00000003568) #25	HGFAC (ENSPLOG00000003505) #26	DOK7 (ENSPLOG00000003465) #27	LRPAP1 (ENSPLOG00000003425) #28	ADRA2C (ENSPLOG00000003403)	CPZ (ENSPLOG00000003386)	TRMT44 (ENSPLOG00000003365)	ACOX3 (ENSPLOG00000003334)	HTRA3 (ENSPLOG00000003274)	SH3TC1 (ENSPLOG00000003184)	ABLIM2 (ENSPLOG00000002684)	AFAP1 (ENSPLOG00000002258)	GRPEL1 (ENSPLOG00000002205)
Cat	MODERN SPECIES	235	CB1H4orf48 (ENSFCAG00000033658) #7	NAT8L (ENSFCAG00000044588) #8	HAUS3 (ENSFCAG00000027704) #11	MXD4 (ENSFCAG00000042853) #12	ZFYVE28 (ENSFCAG00000052700) #13	CFAP99 (ENSFCAG00000037967) #14	RNF4 (ENSFCAG00000004051) #15	FAM193A (ENSFCAG00000004056) #16	TNIP2 (ENSFCAG00000004062) #17	ENSFCAG00000047433	SH3BP2 (ENSFCAG00000025020) #18	ENSFCAG00000028314	ADD1 (ENSFCAG00000024752) #19	MFSD10 (ENSFCAG00000004599) #20	NOP14 (ENSFCAG00000004601) #21	GRK4 (ENSFCAG00000023067) #22	HTT (ENSFCAG00000004607) #23	MSANTD1 (ENSFCAG00000004611) #24	RGS12 (ENSFCAG00000004612) #25	HGFAC (ENSFCAG00000012646) #26	DOK7 (ENSFCAG00000012716) #27	LRPAP1 (ENSFCAG00000028599) #28	ENSFCAG00000047516	ADRA2C (ENSFCAG00000023309)	HMX1 (ENSFCAG00000045042)	CPZ (ENSFCAG00000015298)	TRMT44 (ENSFCAG00000015295)	ACOX3 (ENSFCAG00000015294)	HTRA3 (ENSFCAG00000015293)	SH3TC1 (ENSFCAG00000046348)	ABLIM2 (ENSFCAG00000015291)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217.ac #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217.ac #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217.ac #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Greater horseshoe bat	MODERN SPECIES	23	C4orf48 (ENSRFEG00010010259) #7	NAT8L (ENSRFEG00010010189) #8	POLN (ENSRFEG00010009949) #9	HAUS3 (ENSRFEG00010009879) #11	MXD4 (ENSRFEG00010009834) #12	ZFYVE28 (ENSRFEG00010009726) #13	CFAP99 (ENSRFEG00010009563) #14	RNF4 (ENSRFEG00010009477) #15	FAM193A (ENSRFEG00010009206) #16	TNIP2 (ENSRFEG00010009107) #17	SH3BP2 (ENSRFEG00010008972) #18	ADD1 (ENSRFEG00010008824) #19	ENSRFEG00010008736	NOP14 (ENSRFEG00010008647) #21	ENSRFEG00010008607	GRK4 (ENSRFEG00010008411) #22	HTT (ENSRFEG00010007650) #23	MSANTD1 (ENSRFEG00010007510) #24	RGS12 (ENSRFEG00010007497) #25	HGFAC (ENSRFEG00010007433) #26	DOK7 (ENSRFEG00010007323) #27	LRPAP1 (ENSRFEG00010007276) #28	ADRA2C (ENSRFEG00010007225)	HMX1 (ENSRFEG00010007198)	CPZ (ENSRFEG00010006985)	TRMT44 (ENSRFEG00010006921)	ACOX3 (ENSRFEG00010006855)	HTRA3 (ENSRFEG00010006798)	SH3TC1 (ENSRFEG00010006738)	ABLIM2 (ENSRFEG00010006470)	AFAP1 (ENSRFEG00010006280)
Microbat	MODERN SPECIES	1473						POLN (ENSMLUG00000007281) #9	HAUS3 (ENSMLUG00000028862) #11	ENSMLUG00000028940 #12	RNF4 (ENSMLUG00000005969) #15	ENSMLUG00000002232 #16	ENSMLUG00000008919	SH3BP2 (ENSMLUG00000015844) #18	ADD1 (ENSMLUG00000005321) #19	ENSMLUG00000027483	NOP14 (ENSMLUG00000010861) #21	GRK4 (ENSMLUG00000005068) #22	HTT (ENSMLUG00000003880) #23
Megabat	MODERN SPECIES	3523													ADD1 (ENSPVAG00000011300) #19	ENSPVAG00000011302	NOP14 (ENSPVAG00000011306) #21	GRK4 (ENSPVAG00000011311) #22	HTT (ENSPVAG00000011314) #23
Equus	ANCESTRAL SPECIES	12	ENSGT00940000157429	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217.ac #13	ENSGT00500000045231 #14	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a
Donkey	MODERN SPECIES	22	HAUS3 (ENSEASG00005022762) #11	POLN (ENSEASG00005022744) #9	MXD4 (ENSEASG00005034001) #12	ENSEASG00005028915 #13	ENSEASG00005022764 #13	CFAP99 (ENSEASG00005022766) #14	ENSEASG00005036723	RNF4 (ENSEASG00005031929) #15	ENSEASG00005035809	FAM193A (ENSEASG00005022783) #16	TNIP2 (ENSEASG00005000121) #17	SH3BP2 (ENSEASG00005000171) #18	ADD1 (ENSEASG00005000389) #19	ENSEASG00005001678	NOP14 (ENSEASG00005001906) #21	GRK4 (ENSEASG00005002174) #22	HTT (ENSEASG00005003073) #23	MSANTD1 (ENSEASG00005004110) #24	ENSEASG00005025149 #25	ENSEASG00005004164 #25	HGFAC (ENSEASG00005004371) #26	DOK7 (ENSEASG00005004429) #27	LRPAP1 (ENSEASG00005004447) #28	ENSEASG00005033997	ENSEASG00005004463	ENSEASG00005032469	ENSEASG00005031500	CPZ (ENSEASG00005004468)	TRMT44 (ENSEASG00005004478)	ACOX3 (ENSEASG00005004493)	HTRA3 (ENSEASG00005004509)
Horse	MODERN SPECIES	22	NELFA (ENSECAG00000010240)	NAT8L (ENSECAG00000009867) #8	HAUS3 (ENSECAG00000004593) #11	POLN (ENSECAG00000007802) #9	MXD4 (ENSECAG00000029077) #12	ENSECAG00000058211 #13	ZFYVE28 (ENSECAG00000024955) #13	CFAP99 (ENSECAG00000029686) #14	ENSECAG00000060379	FAM193A (ENSECAG00000024501) #16	TNIP2 (ENSECAG00000024134) #17	SH3BP2 (ENSECAG00000021841) #18	ADD1 (ENSECAG00000013136) #19	MFSD10 (ENSECAG00000010491)	NOP14 (ENSECAG00000023951) #21	GRK4 (ENSECAG00000018979) #22	HTT (ENSECAG00000008684) #23	MSANTD1 (ENSECAG00000008424) #24	RGS12 (ENSECAG00000019746) #25	HGFAC (ENSECAG00000019001) #26	DOK7 (ENSECAG00000017927) #27	LRPAP1 (ENSECAG00000014825) #28	HMX1 (ENSECAG00000032622)	ENSECAG00000057404	ENSECAG00000036844	CPZ (ENSECAG00000012887)	TRMT44 (ENSECAG00000011958)	ACOX3 (ENSECAG00000008588)	HTRA3 (ENSECAG00000000727)	SH3TC1 (ENSECAG00000020879)	ABLIM2 (ENSECAG00000016485)
Atlantogenata	ANCESTRAL SPECIES	131											ENSGT00940000164052	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a.m	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a
Afrotheria	ANCESTRAL SPECIES	171												ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a.m	ENSGT00950000183067.a.a
Afrotheria_a	ANCESTRAL SPECIES	173												ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a.m	ENSGT00950000183067.a.a
Elephant	MODERN SPECIES	164	NELFA (ENSLAFG00000008168)	C4orf48 (ENSLAFG00000029945) #7	NAT8L (ENSLAFG00000030733) #8	POLN (ENSLAFG00000014515) #9	HAUS3 (ENSLAFG00000020863) #11	MXD4 (ENSLAFG00000026709) #12	ENSLAFG00000001042 #13	RNF4 (ENSLAFG00000007382) #15	ENSLAFG00000004078 #16	ENSLAFG00000028553 #16	ENSLAFG00000027379	SH3BP2 (ENSLAFG00000016902) #18	ADD1 (ENSLAFG00000028230) #19	ENSLAFG00000029996	NOP14 (ENSLAFG00000017989) #21	GRK4 (ENSLAFG00000015019) #22	HTT (ENSLAFG00000013021) #23	MSANTD1 (ENSLAFG00000032063) #24	RGS12 (ENSLAFG00000013706) #25	DOK7 (ENSLAFG00000020555) #27	LRPAP1 (ENSLAFG00000001667) #28	ENSLAFG00000032054	TRMT44 (ENSLAFG00000005046)	ACOX3 (ENSLAFG00000031250)	HTRA3 (ENSLAFG00000001907)	SH3TC1 (ENSLAFG00000016068)	ABLIM2 (ENSLAFG00000031132)	AFAP1 (ENSLAFG00000028754)
Hyrax	MODERN SPECIES	1918																GRK4 (ENSPCAG00000016284) #22
Tenrec	MODERN SPECIES	2362																GRK4 (ENSETEG00000018959) #22
Xenarthra	ANCESTRAL SPECIES	643														ENSGT00940000158581 #19	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000004855 #28
Armadillo	MODERN SPECIES	4233													ENSDNOG00000039809	ADD1 (ENSDNOG00000037787) #19	ENSDNOG00000040831 #21	GRK4 (ENSDNOG00000018613) #22	HTT (ENSDNOG00000019218) #23	MSANTD1 (ENSDNOG00000024044) #24	ENSDNOG00000035879	RGS12 (ENSDNOG00000043466) #25	ENSDNOG00000023941 #26	ENSDNOG00000041961	LRPAP1 (ENSDNOG00000045324) #28
Sloth	MODERN SPECIES	2138																GRK4 (ENSCHOG00000001558) #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00390000005342	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00390000005342.l.a	ENSGT00390000013043 #7	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000157429	ENSGT00390000005342.l.a	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000157429	ENSGT00390000005342.l.a	ENSGT00950000182932.B #8	ENSGT00940000159015 #9	ENSGT00390000011904 #11	ENSGT00940000160120 #12	ENSGT00940000157217 #13	ENSGT00500000045231 #14	ENSGT00390000010318 #15	ENSGT00390000000973.a.b #16	ENSGT00510000046908.a.b #17	ENSGT00390000002216 #18	ENSGT00940000158581 #19	ENSGT00830000128422	ENSGT00390000017459 #21	ENSGT00940000160151 #22	ENSGT00390000015863 #23	ENSGT00390000002245 #24	ENSGT00940000159741 #25	ENSGT00940000159778 #26	ENSGT00390000015386 #27	ENSGT00390000004855 #28	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A
koala	MODERN SPECIES	43	ENSPCIG00000037120	NAT8L (ENSPCIG00000002186) #8	ENSPCIG00000028500	POLN (ENSPCIG00000028499) #9	HAUS3 (ENSPCIG00000032540) #11	MXD4 (ENSPCIG00000028502) #12	ZFYVE28 (ENSPCIG00000028505) #13	ENSPCIG00000028507 #14	RNF4 (ENSPCIG00000028508) #15	FAM193A (ENSPCIG00000028509) #16	TNIP2 (ENSPCIG00000001126) #17	SH3BP2 (ENSPCIG00000028511) #18	ADD1 (ENSPCIG00000028514) #19	ENSPCIG00000028515	NOP14 (ENSPCIG00000028518) #21	GRK4 (ENSPCIG00000028521) #22	HTT (ENSPCIG00000028525) #23	MSANTD1 (ENSPCIG00000028526) #24	RGS12 (ENSPCIG00000028527) #25	HGFAC (ENSPCIG00000028528) #26	DOK7 (ENSPCIG00000028529) #27	LRPAP1 (ENSPCIG00000028530) #28	ADRA2C (ENSPCIG00000014482)	ENSPCIG00000023618	ENSPCIG00000023620	CPZ (ENSPCIG00000023623)	ENSPCIG00000023628	TRMT44 (ENSPCIG00000023633)	ACOX3 (ENSPCIG00000023639)	HTRA3 (ENSPCIG00000023654)	SH3TC1 (ENSPCIG00000023664)
Common wonbat	MODERN SPECIES	1054	NSD2 (ENSVURG00010021411)	ENSVURG00010021490	ENSVURG00010021495	ENSVURG00010021502 #8	HAUS3 (ENSVURG00010021506) #11	MXD4 (ENSVURG00010021518) #12	ENSVURG00010021528 #13	ENSVURG00010021535 #14	RNF4 (ENSVURG00010021546) #15	FAM193A (ENSVURG00010021562) #16	TNIP2 (ENSVURG00010021586) #17	SH3BP2 (ENSVURG00010021621) #18	ADD1 (ENSVURG00010021640) #19	ENSVURG00010021651	NOP14 (ENSVURG00010021659) #21	GRK4 (ENSVURG00010021670) #22	HTT (ENSVURG00010021701) #23	MSANTD1 (ENSVURG00010021763) #24	RGS12 (ENSVURG00010021768) #25	HGFAC (ENSVURG00010021775) #26	DOK7 (ENSVURG00010021778) #27	LRPAP1 (ENSVURG00010021783) #28	ADRA2C (ENSVURG00010021786)	HMX1 (ENSVURG00010021792)	CPZ (ENSVURG00010021800)	GPR78 (ENSVURG00010021802)	TRMT44 (ENSVURG00010021809)	ACOX3 (ENSVURG00010021844)	HTRA3 (ENSVURG00010021852)	SH3TC1 (ENSVURG00010021859)	ABLIM2 (ENSVURG00010021886)
Wallaby	MODERN SPECIES	3255																ENSMEUG00000014217 #22
Tasmanian devil	MODERN SPECIES	5	NSD2 (ENSSHAG00000006750)	NELFA (ENSSHAG00000006075)	ENSSHAG00000023580 #7	NAT8L (ENSSHAG00000003078) #8	ENSSHAG00000012083 #11	ENSSHAG00000028807 #12	ZFYVE28 (ENSSHAG00000010322) #13	ENSSHAG00000026056 #14	FAM193A (ENSSHAG00000004929) #16	TNIP2 (ENSSHAG00000003911) #17	SH3BP2 (ENSSHAG00000001849) #18	ENSSHAG00000021157	ADD1 (ENSSHAG00000011634) #19	ENSSHAG00000011412	NOP14 (ENSSHAG00000010914) #21	GRK4 (ENSSHAG00000010073) #22	HTT (ENSSHAG00000008126) #23	MSANTD1 (ENSSHAG00000027187) #24	RGS12 (ENSSHAG00000002156) #25	HGFAC (ENSSHAG00000001769) #26	DOK7 (ENSSHAG00000029804) #27	LRPAP1 (ENSSHAG00000014590) #28	ENSSHAG00000021069	ENSSHAG00000009037	ENSSHAG00000024016	CPZ (ENSSHAG00000002362)	GPR78 (ENSSHAG00000031228)	TRMT44 (ENSSHAG00000027526)	ENSSHAG00000027734	ENSSHAG00000016195	HTRA3 (ENSSHAG00000015806)
Opossum	MODERN SPECIES	4	NELFA (ENSMODG00000004110)	ENSMODG00000024702 #7	NAT8L (ENSMODG00000004088) #8	POLN (ENSMODG00000004074) #9	MXD4 (ENSMODG00000004033) #12	ZFYVE28 (ENSMODG00000004017) #13	ENSMODG00000050224 #14	RNF4 (ENSMODG00000003938) #15	FAM193A (ENSMODG00000003925) #16	TNIP2 (ENSMODG00000003892) #17	SH3BP2 (ENSMODG00000003843) #18	ADD1 (ENSMODG00000003815) #19	ENSMODG00000003757	NOP14 (ENSMODG00000003736) #21	ENSMODG00000051167	GRK4 (ENSMODG00000003693) #22	HTT (ENSMODG00000003615) #23	MSANTD1 (ENSMODG00000003508) #24	ENSMODG00000003502 #25	ENSMODG00000049174 #25	HGFAC (ENSMODG00000003485) #26	DOK7 (ENSMODG00000003469) #27	LRPAP1 (ENSMODG00000003461) #28	ADRA2C (ENSMODG00000003290)	ENSMODG00000003283	ENSMODG00000043158	CPZ (ENSMODG00000003209)	GPR78 (ENSMODG00000003175)	ENSMODG00000039676	ACOX3 (ENSMODG00000003150)	HTRA3 (ENSMODG00000003113)