Artiodactyla	ANCESTRAL SPECIES	27	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00410000028701	ENSGT00940000172425 #11	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00940000167080	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00910000148022	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a
Artiodactyla_a	ANCESTRAL SPECIES	29	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00410000028701	ENSGT00940000172425 #11	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00940000167080	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00910000148022	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a
Artiodactyla_b	ANCESTRAL SPECIES	27	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00410000028701	ENSGT00940000172425 #11	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00940000167080	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00910000148022	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000158809	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00940000172425 #11	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000158809	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00940000172425 #11	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000161191.A #34	ENSGT01090000260098.B	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000158809	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00940000172425 #11	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Caprinae	ANCESTRAL SPECIES	23	ENSGT00940000157567	ENSGT00940000165398	ENSGT00940000158809	ENSGT00440000033408.a #7	ENSGT00940000154775.c.b	ENSGT00940000156390 #9	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000154431.e.a.a.a.a.a.a #31	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Rambouillet Sheep	MODERN SPECIES	4	PLXDC2 (ENSOARG00020023004) #7	ENSOARG00020023295 #8	NEBL (ENSOARG00020023328) #9	ENSOARG00020023735 #10	ENSOARG00020023745 #11	SKIDA1 (ENSOARG00020023795) #12	MLLT10 (ENSOARG00020023844) #13	DNAJC1 (ENSOARG00020024307) #14	ENSOARG00020024323 #15	COMMD3 (ENSOARG00020024334) #16	BMI1 (ENSOARG00020024353) #17	SPAG6 (ENSOARG00020024405) #18	PIP4K2A (ENSOARG00020024466) #19	ARMC3 (ENSOARG00020024507) #20	MSRB2 (ENSOARG00020024574) #21	PTF1A (ENSOARG00020024582) #22	ENSOARG00020024601 #23	OTUD1 (ENSOARG00020024691) #24	KIAA1217 (ENSOARG00020024750) #25	ARHGAP21 (ENSOARG00020025002) #26	PRTFDC1 (ENSOARG00020025193) #27	ENKUR (ENSOARG00020025225) #28	THNSL1 (ENSOARG00020025238) #29	GPR158 (ENSOARG00020025256) #30	ENSOARG00020025314 #31	MYO3A (ENSOARG00020025333) #32	GAD2 (ENSOARG00020025435) #33	FZD8 (ENSOARG00020025454) #34	OPTN (ENSOARG00020003222) #35	PHYH (ENSOARG00020003287) #36	SEPHS1 (ENSOARG00020003364) #37
Goat	MODERN SPECIES	4	MALRD1 (ENSCHIG00000021485)	PLXDC2 (ENSCHIG00000023670) #7	ENSCHIG00000023193	NEBL (ENSCHIG00000023751) #9	SKIDA1 (ENSCHIG00000020595) #12	MLLT10 (ENSCHIG00000010933) #13	DNAJC1 (ENSCHIG00000008531) #14	ENSCHIG00000010411	COMMD3 (ENSCHIG00000017616) #16	BMI1 (ENSCHIG00000016716) #17	SPAG6 (ENSCHIG00000025023) #18	PIP4K2A (ENSCHIG00000022526) #19	ENSCHIG00000007754	ARMC3 (ENSCHIG00000023741) #20	MSRB2 (ENSCHIG00000014549) #21	PTF1A (ENSCHIG00000024165) #22	C10orf67 (ENSCHIG00000014515) #23	OTUD1 (ENSCHIG00000011814) #24	KIAA1217 (ENSCHIG00000022589) #25	ARHGAP21 (ENSCHIG00000018776) #26	PRTFDC1 (ENSCHIG00000019326) #27	ENKUR (ENSCHIG00000009363) #28	GPR158 (ENSCHIG00000025773) #30	ENSCHIG00000013726	ENSCHIG00000011148 #31	MYO3A (ENSCHIG00000015900) #32	GAD2 (ENSCHIG00000021003) #33	FZD8 (ENSCHIG00000026810) #34	OPTN (ENSCHIG00000017855) #35	MCM10 (ENSCHIG00000021952)	UCMA (ENSCHIG00000025422)
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000172425 #11	ENSGT00940000170401.d	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000009819.a.b.a.a.b.b.i.b	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918.g #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Bos	ANCESTRAL SPECIES	22	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000172425 #11	ENSGT00940000170401.d	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000009819.a.b.a.a.b.b.i.b	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918.g #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492	ENSGT00390000001775.B.h ##36
Bos_b	ANCESTRAL SPECIES	4	ENSGT00960000190920	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000172425 #11	ENSGT00940000170401.d	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918.g #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492	ENSGT00390000001775.B.h ##36
Cow	MODERN SPECIES	4	ENSBTAG00000048971	ENSBTAG00000003937	ENSBTAG00000050131	ENSBTAG00000050686	SKIDA1 (ENSBTAG00000044047) #12	MLLT10 (ENSBTAG00000044074) #13	DNAJC1 (ENSBTAG00000033315) #14	ENSBTAG00000025968	ENSBTAG00000051361	COMMD3 (ENSBTAG00000003589) #16	BMI1 (ENSBTAG00000015584) #17	SPAG6 (ENSBTAG00000033291) #18	PIP4K2A (ENSBTAG00000018033) #19	ARMC3 (ENSBTAG00000020929) #20	MSRB2 (ENSBTAG00000044112) #21	PTF1A (ENSBTAG00000047315) #22	OTUD1 (ENSBTAG00000047752) #24	KIAA1217 (ENSBTAG00000018395) #25	ARHGAP21 (ENSBTAG00000021857) #26	ENKUR (ENSBTAG00000015569) #28	THNSL1 (ENSBTAG00000009117) #29	GPR158 (ENSBTAG00000023920) #30	MYO3A (ENSBTAG00000002123) #32	GAD2 (ENSBTAG00000008056) #33	GJD4 (ENSBTAG00000003640)	FZD8 (ENSBTAG00000052989) #34	OPTN (ENSBTAG00000016401) #35	MCM10 (ENSBTAG00000016406)	UCMA (ENSBTAG00000054631)	ENSBTAG00000047869 ##36	PHYH (ENSBTAG00000007700) #36
Hybrid Bos Indicus	MODERN SPECIES	4	ENSBIXG00005021529	PLXDC2 (ENSBIXG00005021627) #7	ENSBIXG00005021704	ENSBIXG00005021732 #11	NEBL (ENSBIXG00005021861) #9	ENSBIXG00005021898	SKIDA1 (ENSBIXG00005021929) #12	MLLT10 (ENSBIXG00005022071) #13	DNAJC1 (ENSBIXG00005022133) #14	BMI1 (ENSBIXG00005007224) #17	SPAG6 (ENSBIXG00005022314) #18	ENSBIXG00005022342	PIP4K2A (ENSBIXG00005022377) #19	ARMC3 (ENSBIXG00005022496) #20	MSRB2 (ENSBIXG00005022544) #21	PTF1A (ENSBIXG00005022569) #22	ENSBIXG00005022633 #23	OTUD1 (ENSBIXG00005003874) #24	ENSBIXG00005022670	KIAA1217 (ENSBIXG00005006893) #25	ARHGAP21 (ENSBIXG00005023435) #26	ENSBIXG00005007388	ENSBIXG00005006004	ENKUR (ENSBIXG00005023626) #28	THNSL1 (ENSBIXG00005023665) #29	GPR158 (ENSBIXG00005023699) #30	MYO3A (ENSBIXG00005023826) #32	GAD2 (ENSBIXG00005004092) #33	FZD8 (ENSBIXG00005005561) #34	ENSBIXG00005023947	OPTN (ENSBIXG00005024077) #35
American bison	MODERN SPECIES	3321	ENSBBBG00000014820	NEBL (ENSBBBG00000014814) #9	ENSBBBG00000014782 #11	ENSBBBG00000003590	ENSBBBG00000014776	SKIDA1 (ENSBBBG00000014768) #12	MLLT10 (ENSBBBG00000014752) #13	DNAJC1 (ENSBBBG00000014621) #14	ENSBBBG00000014606	COMMD3 (ENSBBBG00000014594) #16	BMI1 (ENSBBBG00000014582) #17	SPAG6 (ENSBBBG00000007604) #18	PIP4K2A (ENSBBBG00000003407) #19	ARMC3 (ENSBBBG00000003388) #20	MSRB2 (ENSBBBG00000014479) #21	PTF1A (ENSBBBG00000014471) #22	KIAA1217 (ENSBBBG00000014434) #25	ARHGAP21 (ENSBBBG00000003208) #26	PRTFDC1 (ENSBBBG00000014140) #27	ENKUR (ENSBBBG00000014121) #28	THNSL1 (ENSBBBG00000003174) #29	GPR158 (ENSBBBG00000008747) #30	ENSBBBG00000014091	GAD2 (ENSBBBG00000014080) #33	ENSBBBG00000003133 #34	OPTN (ENSBBBG00000014045) #35	MCM10 (ENSBBBG00000003086)	UCMA (ENSBBBG00000008745)	ENSBBBG00000013955 ##36	ENSBBBG00000003045 #36	SEPHS1 (ENSBBBG00000013939) #37
Siberian musk deer	MODERN SPECIES	1194	PLXDC2 (ENSMMSG00000011036) #7	ENSMMSG00000011005	NEBL (ENSMMSG00000010862) #9	ENSMMSG00000010842	ENSMMSG00000010830	SKIDA1 (ENSMMSG00000010753) #12	MLLT10 (ENSMMSG00000010556) #13	DNAJC1 (ENSMMSG00000010489) #14	COMMD3 (ENSMMSG00000010440) #16	BMI1 (ENSMMSG00000010401) #17	SPAG6 (ENSMMSG00000009939) #18	PIP4K2A (ENSMMSG00000009845) #19	ENSMMSG00000009832	ARMC3 (ENSMMSG00000009602) #20	MSRB2 (ENSMMSG00000009568) #21	PTF1A (ENSMMSG00000009546) #22	OTUD1 (ENSMMSG00000009420) #24	KIAA1217 (ENSMMSG00000009308) #25	ARHGAP21 (ENSMMSG00000008987) #26	PRTFDC1 (ENSMMSG00000008847) #27	ENSMMSG00000008819	ENKUR (ENSMMSG00000008794) #28	THNSL1 (ENSMMSG00000008782) #29	GPR158 (ENSMMSG00000008659) #30	ENSMMSG00000008632	ENSMMSG00000008510	GAD2 (ENSMMSG00000008371) #33	FZD8 (ENSMMSG00000008339) #34	OPTN (ENSMMSG00000008278) #35	MCM10 (ENSMMSG00000008245)	UCMA (ENSMMSG00000008183)
Yarkand deer	MODERN SPECIES	15	ENSCHYG00000005509	NEBL (ENSCHYG00000005566) #9	ENSCHYG00000006146 #11	ENSCHYG00000006161	SKIDA1 (ENSCHYG00000006188) #12	ENSCHYG00000006224 #13	DNAJC1 (ENSCHYG00000006309) #14	ENSCHYG00000006367 ##8	BMI1 (ENSCHYG00000006383) #17	SPAG6 (ENSCHYG00000006434) #18	ENSCHYG00000006667	PIP4K2A (ENSCHYG00000006696) #19	ENSCHYG00000006767	ARMC3 (ENSCHYG00000006792) #20	ENSCHYG00000007007 #21	PTF1A (ENSCHYG00000007052) #22	ENSCHYG00000007073 #23	OTUD1 (ENSCHYG00000007135) #24	ENSCHYG00000007163	KIAA1217 (ENSCHYG00000007279) #25	ENSCHYG00000007907	ARHGAP21 (ENSCHYG00000007972) #26	PRTFDC1 (ENSCHYG00000008459) #27	ENKUR (ENSCHYG00000008582) #28	THNSL1 (ENSCHYG00000008612) #29	GPR158 (ENSCHYG00000008627) #30	MYO3A (ENSCHYG00000008718) #32	GAD2 (ENSCHYG00000009336) #33	GJD4 (ENSCHYG00000009556)	OPTN (ENSCHYG00000009642) #35	MCM10 (ENSCHYG00000009833)
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000158809	ENSGT01000000221977	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000012138.a.b.t.cb	ENSGT00510000049635 #24	ENSGT00910000148022	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000158809	ENSGT01000000221977	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000012138.a.b.t.cb	ENSGT00510000049635 #24	ENSGT00910000148022	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000158809.i	ENSGT01000000221977	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000012138.a.b.t.cb	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT01000000221977	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00940000154775.c.b	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000163089.b	ENSGT00940000161000 #22	ENSGT00390000012138.a.b.t.cb	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Monodontidae	ANCESTRAL SPECIES	22	ENSGT00940000158809.i	ENSGT01000000221977	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000163089.b	ENSGT00940000161000 #22	ENSGT00390000012138.a.b.t.cb	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT01090000260098.B	ENSGT00940000161191.A #34	ENSGT00530000063808.b #35	ENSGT00390000007134	ENSGT00390000011492
Beluga whale	MODERN SPECIES	22	ENSDLEG00000004998	PLXDC2 (ENSDLEG00000005004) #7	ENSDLEG00000005011	NEBL (ENSDLEG00000005016) #9	NEBL (ENSDLEG00000005042) #9	SKIDA1 (ENSDLEG00000005109) #12	MLLT10 (ENSDLEG00000005121) #13	DNAJC1 (ENSDLEG00000005162) #14	COMMD3 (ENSDLEG00000005177) #16	BMI1 (ENSDLEG00000005183) #17	SPAG6 (ENSDLEG00000005196) #18	PIP4K2A (ENSDLEG00000005239) #19	ARMC3 (ENSDLEG00000005283) #20	MSRB2 (ENSDLEG00000005444) #21	ENSDLEG00000005452	PTF1A (ENSDLEG00000005455) #22	ENSDLEG00000005462	OTUD1 (ENSDLEG00000005465) #24	KIAA1217 (ENSDLEG00000005487) #25	ARHGAP21 (ENSDLEG00000005573) #26	PRTFDC1 (ENSDLEG00000005627) #27	ENKUR (ENSDLEG00000005646) #28	THNSL1 (ENSDLEG00000005663) #29	GPR158 (ENSDLEG00000005672) #30	ENSDLEG00000005693	MYO3A (ENSDLEG00000005721) #32	GAD2 (ENSDLEG00000005786) #33	GJD4 (ENSDLEG00000005805)	FZD8 (ENSDLEG00000005816) #34	OPTN (ENSDLEG00000005824) #35	MCM10 (ENSDLEG00000005866)
Narwhal	MODERN SPECIES	308	PLXDC2 (ENSMMNG00015015001) #7	ENSMMNG00015014981	NEBL (ENSMMNG00015014944) #9	ENSMMNG00015014909	SKIDA1 (ENSMMNG00015014859) #12	MLLT10 (ENSMMNG00015014594) #13	ENSMMNG00015014486	DNAJC1 (ENSMMNG00015014465) #14	ENSMMNG00015014450	BMI1 (ENSMMNG00015014440) #17	SPAG6 (ENSMMNG00015014387) #18	PIP4K2A (ENSMMNG00015014340) #19	ARMC3 (ENSMMNG00015014277) #20	MSRB2 (ENSMMNG00015014254) #21	ENSMMNG00015014244	PTF1A (ENSMMNG00015014226) #22	ENSMMNG00015014219	OTUD1 (ENSMMNG00015014213) #24	KIAA1217 (ENSMMNG00015014142) #25	ARHGAP21 (ENSMMNG00015014062) #26	PRTFDC1 (ENSMMNG00015014024) #27	ENKUR (ENSMMNG00015014000) #28	THNSL1 (ENSMMNG00015013993) #29	GPR158 (ENSMMNG00015013963) #30	MYO3A (ENSMMNG00015013883) #32	GAD2 (ENSMMNG00015013825) #33	OPTN (ENSMMNG00015013794) #35	MCM10 (ENSMMNG00015013720)	UCMA (ENSMMNG00015013649)	PHYH (ENSMMNG00015013619) #36	SEPHS1 (ENSMMNG00015013598) #37
Vaquita	MODERN SPECIES	11	PLXDC2 (ENSPSNG00000008936) #7	NEBL (ENSPSNG00000008689) #9	ENSPSNG00000008581	ENSPSNG00000008537	SKIDA1 (ENSPSNG00000008497) #12	ENSPSNG00000008481	MLLT10 (ENSPSNG00000008148) #13	DNAJC1 (ENSPSNG00000008059) #14	COMMD3 (ENSPSNG00000008023) #16	BMI1 (ENSPSNG00000007988) #17	SPAG6 (ENSPSNG00000007749) #18	PIP4K2A (ENSPSNG00000007673) #19	ARMC3 (ENSPSNG00000007614) #20	MSRB2 (ENSPSNG00000007591) #21	ENSPSNG00000007566	PTF1A (ENSPSNG00000007537) #22	ENSPSNG00000007505	OTUD1 (ENSPSNG00000007481) #24	KIAA1217 (ENSPSNG00000006898) #25	ARHGAP21 (ENSPSNG00000006645) #26	PRTFDC1 (ENSPSNG00000006527) #27	ENKUR (ENSPSNG00000006476) #28	THNSL1 (ENSPSNG00000006461) #29	GPR158 (ENSPSNG00000006342) #30	ENSPSNG00000006275 #32	GAD2 (ENSPSNG00000006192) #33	FZD8 (ENSPSNG00000006170) #34	OPTN (ENSPSNG00000006139) #35	MCM10 (ENSPSNG00000006091)	UCMA (ENSPSNG00000006044)	PHYH (ENSPSNG00000005995) #36
Dolphin	MODERN SPECIES	1711																PTF1A (ENSTTRG00000016843) #22	ENSTTRG00000016844	ENSTTRG00000016845 #23
Sperm whale	MODERN SPECIES	2	ENSPCTG00005002247	PLXDC2 (ENSPCTG00005002198) #7	ENSPCTG00005002173	NEBL (ENSPCTG00005002125) #9	ENSPCTG00005002104	SKIDA1 (ENSPCTG00005002080) #12	MLLT10 (ENSPCTG00005001847) #13	ENSPCTG00005001796	DNAJC1 (ENSPCTG00005001781) #14	COMMD3 (ENSPCTG00005001759) #16	BMI1 (ENSPCTG00005001744) #17	SPAG6 (ENSPCTG00005001658) #18	PIP4K2A (ENSPCTG00005001598) #19	ARMC3 (ENSPCTG00005001504) #20	MSRB2 (ENSPCTG00005001481) #21	PTF1A (ENSPCTG00005001474) #22	ENSPCTG00005001466	OTUD1 (ENSPCTG00005001454) #24	ENSPCTG00005001440	KIAA1217 (ENSPCTG00005001014) #25	ARHGAP21 (ENSPCTG00005000826) #26	PRTFDC1 (ENSPCTG00005000745) #27	ENKUR (ENSPCTG00005000710) #28	THNSL1 (ENSPCTG00005000693) #29	ENSPCTG00005000685	GPR158 (ENSPCTG00005000644) #30	MYO3A (ENSPCTG00005000572) #32	GAD2 (ENSPCTG00005011554) #33	FZD8 (ENSPCTG00005011487) #34	GJD4 (ENSPCTG00005011420)	ENSPCTG00005011354
Blue whale	MODERN SPECIES	11	PLXDC2 (ENSBMSG00010004417) #7	ENSBMSG00010004405	NEBL (ENSBMSG00010004247) #9	ENSBMSG00010004203	ENSBMSG00010004190	SKIDA1 (ENSBMSG00010004180) #12	MLLT10 (ENSBMSG00010004128) #13	ENSBMSG00010004104	DNAJC1 (ENSBMSG00010004096) #14	COMMD3 (ENSBMSG00010004076) #16	BMI1 (ENSBMSG00010004062) #17	SPAG6 (ENSBMSG00010003990) #18	PIP4K2A (ENSBMSG00010003968) #19	ARMC3 (ENSBMSG00010003930) #20	ENSBMSG00010003915 #21	PTF1A (ENSBMSG00010003904) #22	ENSBMSG00010003856	OTUD1 (ENSBMSG00010003848) #24	ENSBMSG00010003843	KIAA1217 (ENSBMSG00010003391) #25	ARHGAP21 (ENSBMSG00010003323) #26	PRTFDC1 (ENSBMSG00010003299) #27	ENKUR (ENSBMSG00010003285) #28	THNSL1 (ENSBMSG00010003276) #29	ENSBMSG00010003269	GPR158 (ENSBMSG00010003248) #30	MYO3A (ENSBMSG00010003231) #32	GAD2 (ENSBMSG00010003210) #33	FZD8 (ENSBMSG00010003200) #34	OPTN (ENSBMSG00010003169) #35	MCM10 (ENSBMSG00010003151)
Camelidae	ANCESTRAL SPECIES	103				ENSGT00940000158809.k	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00940000167080	ENSGT00390000003836 #23	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29
Arabian camel	MODERN SPECIES	28	SKIDA1 (ENSCDRG00005018822) #12	MLLT10 (ENSCDRG00005018405) #13	DNAJC1 (ENSCDRG00005018321) #14	ENSCDRG00005018291	ENSCDRG00005018255	COMMD3 (ENSCDRG00005018220) #16	BMI1 (ENSCDRG00005018183) #17	SPAG6 (ENSCDRG00005018080) #18	PIP4K2A (ENSCDRG00005018006) #19	ENSCDRG00005017993	ENSCDRG00005017977	ENSCDRG00005017964	ARMC3 (ENSCDRG00005017783) #20	MSRB2 (ENSCDRG00005017746) #21	ENSCDRG00005017724	PTF1A (ENSCDRG00005017662) #22	ENSCDRG00005017628	ENSCDRG00005017606	ENSCDRG00005017587	C10orf67 (ENSCDRG00005017524) #23	ENSCDRG00005017498	ENSCDRG00005017355	ENSCDRG00005017337	ENSCDRG00005017307	ENSCDRG00005017302	ENSCDRG00005017278	ENSCDRG00005017250	ENSCDRG00005017230	ENSCDRG00005017205	ENSCDRG00005017197	ENSCDRG00005017172
Suina	ANCESTRAL SPECIES	44	ENSGT00390000009751	ENSGT00940000157567	ENSGT00940000158809	ENSGT00440000033408.a #7	ENSGT00940000156390 #9	ENSGT00410000028443	ENSGT00940000153451.a.b #12	ENSGT00940000157711 #13	ENSGT00940000156678 #14	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635 #24	ENSGT00940000156098 #25	ENSGT00940000155406 #26	ENSGT00940000162225 #27	ENSGT00940000153866.A #28	ENSGT00940000161144 #29	ENSGT00940000155918 #30	ENSGT00940000157951 #33	ENSGT00940000156105	ENSGT00940000153498.B.a	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Chacoan peccary	MODERN SPECIES	48				PLXDC2 (ENSCWAG00000007075) #7	NEBL (ENSCWAG00000006911) #9	ENSCWAG00000006866	SKIDA1 (ENSCWAG00000006839) #12	MLLT10 (ENSCWAG00000006625) #13	DNAJC1 (ENSCWAG00000006583) #14	COMMD3 (ENSCWAG00000006540) #16	BMI1 (ENSCWAG00000006472) #17	SPAG6 (ENSCWAG00000006200) #18	PIP4K2A (ENSCWAG00000006142) #19	ARMC3 (ENSCWAG00000005912) #20	MSRB2 (ENSCWAG00000005884) #21	PTF1A (ENSCWAG00000005861) #22	OTUD1 (ENSCWAG00000005832) #24	KIAA1217 (ENSCWAG00000004897) #25	ARHGAP21 (ENSCWAG00000003379) #26	ENSCWAG00000003369	PRTFDC1 (ENSCWAG00000003354) #27	ENKUR (ENSCWAG00000003334) #28	THNSL1 (ENSCWAG00000003329) #29	GPR158 (ENSCWAG00000003292) #30	ENSCWAG00000003264	GAD2 (ENSCWAG00000003224) #33	APBB1IP (ENSCWAG00000003183)	PDSS1 (ENSCWAG00000003156)	ABI1 (ENSCWAG00000002988)	ACBD5 (ENSCWAG00000002902)	MASTL (ENSCWAG00000002823)
Pig	MODERN SPECIES	1	PLXDC2 (ENSSSCG00000032444) #7	NEBL (ENSSSCG00000011090) #9	SKIDA1 (ENSSSCG00000011087) #12	ENSSSCG00000060456	ENSSSCG00000045711	MLLT10 (ENSSSCG00000011085) #13	DNAJC1 (ENSSSCG00000026001) #14	ENSSSCG00000055138	COMMD3 (ENSSSCG00000011082) #16	BMI1 (ENSSSCG00000011081) #17	SPAG6 (ENSSSCG00000011080) #18	PIP4K2A (ENSSSCG00000011079) #19	ENSSSCG00000045344	ARMC3 (ENSSSCG00000011078) #20	MSRB2 (ENSSSCG00000011077) #21	PTF1A (ENSSSCG00000030662) #22	ENSSSCG00000058253 #23	OTUD1 (ENSSSCG00000011076) #24	KIAA1217 (ENSSSCG00000011075) #25	ARHGAP21 (ENSSSCG00000011074) #26	ENSSSCG00000059535	ENSSSCG00000037690	PRTFDC1 (ENSSSCG00000028135) #27	ENKUR (ENSSSCG00000032929) #28	THNSL1 (ENSSSCG00000011071) #29	GPR158 (ENSSSCG00000038536) #30	ENSSSCG00000011059	GAD2 (ENSSSCG00000011060) #33	APBB1IP (ENSSSCG00000030156)	PDSS1 (ENSSSCG00000011061)	ABI1 (ENSSSCG00000024127)