Laurasiatheria_c	ANCESTRAL SPECIES	27	ENSGT00950000182837.a.b.a #7	ENSGT00940000155370 #8	ENSGT00940000157567 #9	ENSGT00940000158809 #10	ENSGT00440000033408.a #11	ENSGT00940000156390 #12	ENSGT00940000153451.a.b #13	ENSGT00940000157711 #14	ENSGT00940000156678 #15	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00510000049635	ENSGT00940000167080	ENSGT00390000003836 #23	ENSGT00940000156098 #24	ENSGT00390000001795	ENSGT00940000155406 #25	ENSGT00940000162225 #26	ENSGT00940000153866.A #27	ENSGT00940000161144 #28	ENSGT00940000155918 #29	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000156105 #34	ENSGT00390000005508.b #35	ENSGT00940000153498.B.a #36
Equus	ANCESTRAL SPECIES	44	ENSGT00950000182837.a.b.a #7	ENSGT00940000155370 #8	ENSGT00940000157567 #9	ENSGT00940000158809 #10	ENSGT00440000033408.a #11	ENSGT00940000156390 #12	ENSGT00940000153451.a.b #13	ENSGT00940000157711 #14	ENSGT00940000156678 #15	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00390000003836 #23	ENSGT00510000049635	ENSGT00940000156098 #24	ENSGT00940000155406 #25	ENSGT00940000162225 #26	ENSGT00940000153866.A #27	ENSGT00940000161144 #28	ENSGT00940000155918 #29	ENSGT00940000153661.a.a #31	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000156105 #34	ENSGT00390000005508.b #35	ENSGT00940000153498.B.a #36	ENSGT00940000154811.A #37
Donkey	MODERN SPECIES	21	CACNB2 (ENSEASG00005019932) #7	NSUN6 (ENSEASG00005019939) #8	ARL5B (ENSEASG00005030385) #9	MALRD1 (ENSEASG00005019949) #10	PLXDC2 (ENSEASG00005019962) #11	NEBL (ENSEASG00005019970) #12	SKIDA1 (ENSEASG00005019976) #13	MLLT10 (ENSEASG00005031964) #14	DNAJC1 (ENSEASG00005006990) #15	ENSEASG00005006975 #16	BMI1 (ENSEASG00005006972) #17	SPAG6 (ENSEASG00005006971) #18	PIP4K2A (ENSEASG00005006966) #19	ARMC3 (ENSEASG00005006950) #20	MSRB2 (ENSEASG00005033779) #21	PTF1A (ENSEASG00005006936) #22	ENSEASG00005038460 #23	KIAA1217 (ENSEASG00005006898) #24	ARHGAP21 (ENSEASG00005006877) #25	PRTFDC1 (ENSEASG00005006868) #26	ENKUR (ENSEASG00005006865) #27	THNSL1 (ENSEASG00005006864) #28	ENSEASG00005006862 #29	ENSEASG00005006859 #30	ENSEASG00005006846 #31	ENSEASG00005006844 #32	GAD2 (ENSEASG00005006835) #33	APBB1IP (ENSEASG00005006831) #34	ENSEASG00005006824 #35	PDSS1 (ENSEASG00005006820) #36	ENSEASG00005006816 #37
Horse	MODERN SPECIES	21	ARL5B (ENSECAG00000009195) #9	MALRD1 (ENSECAG00000007484) #10	PLXDC2 (ENSECAG00000017520) #11	NEBL (ENSECAG00000038375) #12	SKIDA1 (ENSECAG00000004192) #13	ENSECAG00000050062	ENSECAG00000054209	MLLT10 (ENSECAG00000012723) #14	DNAJC1 (ENSECAG00000007629) #15	COMMD3 (ENSECAG00000021328) #16	BMI1 (ENSECAG00000019529) #17	SPAG6 (ENSECAG00000012645) #18	PIP4K2A (ENSECAG00000007707) #19	ARMC3 (ENSECAG00000013576) #20	MSRB2 (ENSECAG00000013072) #21	PTF1A (ENSECAG00000038284) #22	C29H10orf67 (ENSECAG00000012482) #23	OTUD1 (ENSECAG00000040284)	ENSECAG00000047964	KIAA1217 (ENSECAG00000000015) #24	ARHGAP21 (ENSECAG00000011309) #25	PRTFDC1 (ENSECAG00000009797) #26	ENKUR (ENSECAG00000008266) #27	THNSL1 (ENSECAG00000009339) #28	GPR158 (ENSECAG00000006062) #29	ENSECAG00000028007	ENSECAG00000019687 #31	MYO3A (ENSECAG00000012060) #32	GAD2 (ENSECAG00000000006) #33	APBB1IP (ENSECAG00000022742) #34	ENSECAG00000032560 #35
Chiroptera	ANCESTRAL SPECIES	55	ENSGT00940000155370 #8	ENSGT00940000157567 #9	ENSGT00940000158809 #10	ENSGT00440000033408.a #11	ENSGT00940000156390 #12	ENSGT00410000028443	ENSGT00940000153451.a.b #13	ENSGT00940000157711 #14	ENSGT00940000156678 #15	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00940000167080	ENSGT00390000003836 #23	ENSGT00940000156098 #24	ENSGT00390000001795	ENSGT00940000155406 #25	ENSGT00940000162225 #26	ENSGT00940000153866.A #27	ENSGT00940000161144 #28	ENSGT00940000155918 #29	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000156105 #34	ENSGT00390000005508.b #35	ENSGT00940000153498.B.a #36	ENSGT00940000154811.A #37
Microchiroptera	ANCESTRAL SPECIES	50	ENSGT00950000182837.a.b.a #7	ENSGT00940000155370 #8	ENSGT00940000157567 #9	ENSGT00940000158809 #10	ENSGT00440000033408.a #11	ENSGT00940000156390 #12	ENSGT00940000153451.a.b #13	ENSGT00940000157711 #14	ENSGT00940000156678 #15	ENSGT00390000015971 #16	ENSGT00940000156042 #17	ENSGT00900000141099 #18	ENSGT00940000156508 #19	ENSGT00940000157476 #20	ENSGT00940000161673 #21	ENSGT00940000161000 #22	ENSGT00510000049635	ENSGT00940000156098 #24	ENSGT00390000001795	ENSGT00940000155406 #25	ENSGT00940000162225 #26	ENSGT00940000153866.A #27	ENSGT00940000161144 #28	ENSGT00940000155918 #29	ENSGT00940000155939 #32	ENSGT00940000157951 #33	ENSGT00940000156105 #34	ENSGT00390000005508.b #35	ENSGT00940000153498.B.a #36	ENSGT00940000154811.A #37	ENSGT00940000156350
Greater horseshoe bat	MODERN SPECIES	30	NEBL (ENSRFEG00010007581) #12	ENSRFEG00010007971	SKIDA1 (ENSRFEG00010008117) #13	MLLT10 (ENSRFEG00010008217) #14	DNAJC1 (ENSRFEG00010008428) #15	COMMD3 (ENSRFEG00010008507) #16	BMI1 (ENSRFEG00010008566) #17	ENSRFEG00010008641 #18	ENSRFEG00010009031 #18	ENSRFEG00010009094	ENSRFEG00010009143 #19	ENSRFEG00010009171 #19	ARMC3 (ENSRFEG00010009262) #20	ENSRFEG00010009810	ENSRFEG00010009887 #21	PTF1A (ENSRFEG00010009952) #22	OTUD1 (ENSRFEG00010010260)	KIAA1217 (ENSRFEG00010010439) #24	ENSRFEG00010011032	ENSRFEG00010011089	ARHGAP21 (ENSRFEG00010011157) #25	PRTFDC1 (ENSRFEG00010011247) #26	ENKUR (ENSRFEG00010011340) #27	THNSL1 (ENSRFEG00010011393) #28	ENSRFEG00010011414	GPR158 (ENSRFEG00010011440) #29	MYO3A (ENSRFEG00010011683) #32	GAD2 (ENSRFEG00010012347) #33	APBB1IP (ENSRFEG00010012424) #34	ENSRFEG00010012518 #35	PDSS1 (ENSRFEG00010012655) #36
Microbat	MODERN SPECIES	1069					NEBL (ENSMLUG00000011932) #12	ENSMLUG00000004554	SKIDA1 (ENSMLUG00000005720) #13	MLLT10 (ENSMLUG00000014901) #14	ENSMLUG00000028742	DNAJC1 (ENSMLUG00000014913) #15	COMMD3 (ENSMLUG00000010985) #16	BMI1 (ENSMLUG00000001692) #17	PIP4K2A (ENSMLUG00000016205) #19	ARMC3 (ENSMLUG00000001594) #20	MSRB2 (ENSMLUG00000010112) #21	PTF1A (ENSMLUG00000010122) #22	ENSMLUG00000010146 #23	ENSMLUG00000024060
Megabat	MODERN SPECIES	1270															MSRB2 (ENSPVAG00000013737) #21	PTF1A (ENSPVAG00000013738) #22	ENSPVAG00000013740	ENSPVAG00000013741 #23