Euteleostomi	ANCESTRAL SPECIES	14	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b	ENSGT00390000004692.d.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000160560	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00530000063861.b.a	ENSGT00940000158325	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Sarcopterygii	ANCESTRAL SPECIES	17	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00390000004692.d.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Amniota	ANCESTRAL SPECIES	9	ENSGT01100000263525.a.b.b	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Mammalia	ANCESTRAL SPECIES	5	ENSGT00940000153231.B	ENSGT01100000263525.a.b.b	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Theria	ANCESTRAL SPECIES	3	ENSGT00940000165410	ENSGT00940000153231.B	ENSGT01100000263525.a.b.b	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Eutheria	ANCESTRAL SPECIES		ENSGT01100000263525.a.b.b	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000165774	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Artiodactyla	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00990000205119	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00390000015470.m.a #9	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
Yarkand deer	MODERN SPECIES	12	ENSCHYG00000025138 #7	ADGRL2 (ENSCHYG00000025187) #8	ENSCHYG00000025554 #9	ENSCHYG00000025564 #10	ENSCHYG00000025603 #11	ADGRL4 (ENSCHYG00000025660) #12	ENSCHYG00000025754 #13	IFI44 (ENSCHYG00000025770) #14	ENSCHYG00000025782 #15	PTGFR (ENSCHYG00000025794) #16	ENSCHYG00000025800 #17	ENSCHYG00000025806 #18	GIPC2 (ENSCHYG00000025813) #19	ENSCHYG00000025842 #20	DNAJB4 (ENSCHYG00000025859) #21	FUBP1 (ENSCHYG00000025894) #22	NEXN (ENSCHYG00000013554) #23	MIGA1 (ENSCHYG00000013877) #24	USP33 (ENSCHYG00000014568) #25	ZZZ3 (ENSCHYG00000015450) #26	AK5 (ENSCHYG00000015698) #27	PIGK (ENSCHYG00000016153) #28	ST6GALNAC5 (ENSCHYG00000016572) #29	ST6GALNAC3 (ENSCHYG00000016624) #30	ASB17 (ENSCHYG00000016708) #31	MSH4 (ENSCHYG00000016798) #32	ENSCHYG00000017021 #33	ACADM (ENSCHYG00000017157) #34	SLC44A5 (ENSCHYG00000017668) #35	LHX8 (ENSCHYG00000018366) #36	ENSCHYG00000018638 #37
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00390000015470.m.a #9	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00390000015470.m.a #9	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
Bovinae	ANCESTRAL SPECIES	1	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00390000015470.m.a #9	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000016972.a.b.a.a	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
American bison	MODERN SPECIES	3296				ADGRL2 (ENSBBBG00000012915) #8	ENSBBBG00000012318	ENSBBBG00000012317 #9	ENSBBBG00000012310	ENSBBBG00000012301	ADGRL4 (ENSBBBG00000012299) #12	IFI44 (ENSBBBG00000001932) #14	IFI44L (ENSBBBG00000006936) #15	PTGFR (ENSBBBG00000012278) #16	ENSBBBG00000008283	GIPC2 (ENSBBBG00000012262) #19	DNAJB4 (ENSBBBG00000012260) #21	FUBP1 (ENSBBBG00000012252) #22	NEXN (ENSBBBG00000012212) #23	MIGA1 (ENSBBBG00000012185) #24	USP33 (ENSBBBG00000012079) #25	ZZZ3 (ENSBBBG00000012017) #26	AK5 (ENSBBBG00000011995) #27	ENSBBBG00000011981	PIGK (ENSBBBG00000002238) #28	ST6GALNAC5 (ENSBBBG00000011963) #29	ST6GALNAC3 (ENSBBBG00000002234) #30	ASB17 (ENSBBBG00000011953) #31	MSH4 (ENSBBBG00000002231) #32	ENSBBBG00000002226 #33
Bos	ANCESTRAL SPECIES		ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00390000015470.m.a #9	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000016972.a.b.a.a	ENSGT00390000003420.a.b.w #19	ENSGT00950000185225 #20	ENSGT00390000003420.a.b.v.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311.c #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
Bos_b	ANCESTRAL SPECIES	1	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00390000015470.m.a #9	ENSGT01030000235809	ENSGT00390000010045.k.a.a.a.b	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000016972.a.b.a.a	ENSGT00390000003420.a.b.w #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311.c #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
Hybrid Bos Indicus	MODERN SPECIES	22	PRKACB (ENSBIXG00005006542)	TTLL7 (ENSBIXG00005028032)	ENSBIXG00005027881	ENSBIXG00005027837	ADGRL2 (ENSBIXG00005027720) #8	ENSBIXG00005027296 #9	ENSBIXG00005027264	ENSBIXG00005027245	ADGRL4 (ENSBIXG00005004685) #12	IFI44 (ENSBIXG00005027171) #14	IFI44L (ENSBIXG00005027151) #15	PTGFR (ENSBIXG00005027104) #16	ENSBIXG00005027068	ENSBIXG00005027040 #19	DNAJB4 (ENSBIXG00005004630) #21	FUBP1 (ENSBIXG00005026936) #22	NEXN (ENSBIXG00005026854) #23	MIGA1 (ENSBIXG00005004577) #24	USP33 (ENSBIXG00005026636) #25	ZZZ3 (ENSBIXG00005026543) #26	ENSBIXG00005026460	AK5 (ENSBIXG00005026434) #27	ENSBIXG00005026376	PIGK (ENSBIXG00005026341) #28	ST6GALNAC5 (ENSBIXG00005026197) #29	ST6GALNAC3 (ENSBIXG00005026153) #30	ASB17 (ENSBIXG00005026119) #31	MSH4 (ENSBIXG00005026100) #32	RABGGTB (ENSBIXG00005026016) #33	ACADM (ENSBIXG00005025973) #34	SLC44A5 (ENSBIXG00005025793) #35
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00390000015470.m.a #9	ENSGT00390000004574.f	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000154550.a.e.b.a.a.a #37
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020001133	ENSOARG00020001115	SAMD13 (ENSOARG00020001103)	PRKACB (ENSOARG00020000399)	TTLL7 (ENSOARG00020000192)	ADGRL2 (ENSOARG00020020283) #8	ENSOARG00020020212 #9	ENSOARG00020020181	ENSOARG00020020128	ADGRL4 (ENSOARG00020019870) #12	IFI44 (ENSOARG00020019816) #14	PTGFR (ENSOARG00020019699) #16	ENSOARG00020019668	GIPC2 (ENSOARG00020019604) #19	DNAJB4 (ENSOARG00020019565) #21	FUBP1 (ENSOARG00020019132) #22	NEXN (ENSOARG00020018583) #23	USP33 (ENSOARG00020017960) #25	ZZZ3 (ENSOARG00020017620) #26	AK5 (ENSOARG00020017396) #27	PIGK (ENSOARG00020017215) #28	ST6GALNAC5 (ENSOARG00020017193) #29	ST6GALNAC3 (ENSOARG00020017136) #30	ASB17 (ENSOARG00020017077) #31	MSH4 (ENSOARG00020016767) #32	RABGGTB (ENSOARG00020016603) #33	ENSOARG00020016546	SLC44A5 (ENSOARG00020015606) #35	LHX8 (ENSOARG00020015425) #36	ENSOARG00020015374 #37	TYW3 (ENSOARG00020015319)
Cetacea	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT01000000220951	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B.ib #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B.ib #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Dolphin	MODERN SPECIES	1148															DNAJB4 (ENSTTRG00000000097) #21	FUBP1 (ENSTTRG00000000096) #22	NEXN (ENSTTRG00000000095) #23	MIGA1 (ENSTTRG00000000093) #24	USP33 (ENSTTRG00000000091) #25	ZZZ3 (ENSTTRG00000000090) #26	AK5 (ENSTTRG00000000089) #27
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B.ib #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Vaquita	MODERN SPECIES		RPF1 (ENSPSNG00000003772)	ENSPSNG00000003753	ENSPSNG00000003738	SAMD13 (ENSPSNG00000003722)	PRKACB (ENSPSNG00000003284)	TTLL7 (ENSPSNG00000003000)	ENSPSNG00000002961	ADGRL2 (ENSPSNG00000002844) #8	ENSPSNG00000002741	ADGRL4 (ENSPSNG00000002636) #12	ENSPSNG00000002591 #14	PTGFR (ENSPSNG00000002568) #16	GIPC2 (ENSPSNG00000002545) #19	ENSPSNG00000002535 #20	DNAJB4 (ENSPSNG00000002510) #21	FUBP1 (ENSPSNG00000002468) #22	NEXN (ENSPSNG00000002375) #23	MIGA1 (ENSPSNG00000002283) #24	USP33 (ENSPSNG00000002158) #25	ZZZ3 (ENSPSNG00000002081) #26	AK5 (ENSPSNG00000002015) #27	PIGK (ENSPSNG00000001969) #28	ST6GALNAC5 (ENSPSNG00000001938) #29	ENSPSNG00000001926	ENSPSNG00000001917	ST6GALNAC3 (ENSPSNG00000001901) #30	ASB17 (ENSPSNG00000001883) #31	MSH4 (ENSPSNG00000001831) #32	ENSPSNG00000001765 #33	ACADM (ENSPSNG00000001696) #34	SLC44A5 (ENSPSNG00000001574) #35
Sperm whale	MODERN SPECIES	15	ENSPCTG00005012591	ENSPCTG00005012636	SAMD13 (ENSPCTG00005012711)	PRKACB (ENSPCTG00005012881)	TTLL7 (ENSPCTG00005015200)	ADGRL2 (ENSPCTG00005015373) #8	ENSPCTG00005015639	ENSPCTG00005015664	ADGRL4 (ENSPCTG00005015730) #12	IFI44 (ENSPCTG00005015945) #14	ENSPCTG00005016057 #15	ENSPCTG00005016139	PTGFR (ENSPCTG00005016188) #16	GIPC2 (ENSPCTG00005016253) #19	DNAJB4 (ENSPCTG00005016294) #21	FUBP1 (ENSPCTG00005016366) #22	NEXN (ENSPCTG00005016451) #23	MIGA1 (ENSPCTG00005016648) #24	USP33 (ENSPCTG00005016830) #25	ZZZ3 (ENSPCTG00005017322) #26	AK5 (ENSPCTG00005017580) #27	PIGK (ENSPCTG00005017853) #28	ST6GALNAC5 (ENSPCTG00005018001) #29	ST6GALNAC3 (ENSPCTG00005018066) #30	ENSPCTG00005018124	ENSPCTG00005018181	ENSPCTG00005018216	ASB17 (ENSPCTG00005018262) #31	MSH4 (ENSPCTG00005018320) #32	ENSPCTG00005018542 #33	ACADM (ENSPCTG00005018751) #34
Blue whale	MODERN SPECIES		ENSBMSG00010010794	SAMD13 (ENSBMSG00010010774)	PRKACB (ENSBMSG00010009636)	TTLL7 (ENSBMSG00010009501)	ENSBMSG00010009486	ADGRL2 (ENSBMSG00010009448) #8	ENSBMSG00010009418	ADGRL4 (ENSBMSG00010009365) #12	ENSBMSG00010009347	IFI44 (ENSBMSG00010009332) #14	IFI44L (ENSBMSG00010009272) #15	PTGFR (ENSBMSG00010009240) #16	GIPC2 (ENSBMSG00010009222) #19	DNAJB4 (ENSBMSG00010009217) #21	ENSBMSG00010009209	FUBP1 (ENSBMSG00010009196) #22	NEXN (ENSBMSG00010009151) #23	MIGA1 (ENSBMSG00010009116) #24	USP33 (ENSBMSG00010009065) #25	ZZZ3 (ENSBMSG00010009017) #26	AK5 (ENSBMSG00010008977) #27	PIGK (ENSBMSG00010008880) #28	ST6GALNAC5 (ENSBMSG00010008852) #29	ENSBMSG00010008844 #30	ENSBMSG00010008837	ASB17 (ENSBMSG00010008824) #31	MSH4 (ENSBMSG00010008797) #32	ENSBMSG00010008772 #33	ENSBMSG00010008751 #33	ACADM (ENSBMSG00010008702) #34	SLC44A5 (ENSBMSG00010008642) #35
Camelidae	ANCESTRAL SPECIES	11	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00940000162419	ENSGT00940000156051	ENSGT00940000163693	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34
Alpaca	MODERN SPECIES	1472															DNAJB4 (ENSVPAG00000004710) #21	FUBP1 (ENSVPAG00000004709) #22
Suina	ANCESTRAL SPECIES	27	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00960000187407	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Pig	MODERN SPECIES	14	PRKACB (ENSSSCG00000040920)	ENSSSCG00000051341	TTLL7 (ENSSSCG00000003760)	ENSSSCG00000046184	ADGRL2 (ENSSSCG00000003761) #8	ENSSSCG00000051159	ENSSSCG00000027421	ENSSSCG00000043601	ADGRL4 (ENSSSCG00000003762) #12	IFI44 (ENSSSCG00000003763) #14	IFI44L (ENSSSCG00000027660) #15	PTGFR (ENSSSCG00000039548) #16	GIPC2 (ENSSSCG00000035582) #19	ENSSSCG00000050806 #20	DNAJB4 (ENSSSCG00000003766) #21	FUBP1 (ENSSSCG00000003771) #22	NEXN (ENSSSCG00000003768) #23	MIGA1 (ENSSSCG00000003770) #24	ENSSSCG00000035986	USP33 (ENSSSCG00000040220) #25	ZZZ3 (ENSSSCG00000003772) #26	ENSSSCG00000041535	AK5 (ENSSSCG00000003773) #27	PIGK (ENSSSCG00000038329) #28	ST6GALNAC5 (ENSSSCG00000033425) #29	ST6GALNAC3 (ENSSSCG00000024494) #30	ASB17 (ENSSSCG00000031522) #31	MSH4 (ENSSSCG00000003775) #32	ENSSSCG00000046691	ACADM (ENSSSCG00000003776) #34	SLC44A5 (ENSSSCG00000003777) #35
Chacoan peccary	MODERN SPECIES	53	DNASE2B (ENSCWAG00000002516)	ENSCWAG00000002530	ENSCWAG00000002540	SAMD13 (ENSCWAG00000002546)	ENSCWAG00000002559	PRKACB (ENSCWAG00000002664)	TTLL7 (ENSCWAG00000003942)	ADGRL2 (ENSCWAG00000004043) #8	ENSCWAG00000004248	ADGRL4 (ENSCWAG00000004302) #12	ENSCWAG00000004545 #15	PTGFR (ENSCWAG00000004602) #16	GIPC2 (ENSCWAG00000004625) #19	ENSCWAG00000004662 #20	DNAJB4 (ENSCWAG00000004682) #21	FUBP1 (ENSCWAG00000004730) #22	NEXN (ENSCWAG00000004774) #23	MIGA1 (ENSCWAG00000004883) #24	ENSCWAG00000005173	USP33 (ENSCWAG00000005216) #25	ZZZ3 (ENSCWAG00000005418) #26	AK5 (ENSCWAG00000005498) #27	PIGK (ENSCWAG00000005584) #28	ST6GALNAC5 (ENSCWAG00000005662) #29	ST6GALNAC3 (ENSCWAG00000005693) #30	ASB17 (ENSCWAG00000005737) #31	MSH4 (ENSCWAG00000005777) #32	RABGGTB (ENSCWAG00000005892) #33	ACADM (ENSCWAG00000005986) #34
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00990000205119	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000165774	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Greater horseshoe bat	MODERN SPECIES	27	DNASE2B (ENSRFEG00010008256)	ENSRFEG00010008224	ENSRFEG00010008199	ENSRFEG00010008163	SAMD13 (ENSRFEG00010008128)	PRKACB (ENSRFEG00010007567)	TTLL7 (ENSRFEG00010007466)	ADGRL2 (ENSRFEG00010007177) #8	ENSRFEG00010007097	ADGRL4 (ENSRFEG00010006999) #12	IFI44 (ENSRFEG00010006933) #14	IFI44L (ENSRFEG00010006850) #15	PTGFR (ENSRFEG00010006813) #16	GIPC2 (ENSRFEG00010006773) #19	DNAJB4 (ENSRFEG00010006739) #21	FUBP1 (ENSRFEG00010006609) #22	NEXN (ENSRFEG00010006473) #23	MIGA1 (ENSRFEG00010006395) #24	ENSRFEG00010006351	USP33 (ENSRFEG00010006168) #25	ZZZ3 (ENSRFEG00010006023) #26	AK5 (ENSRFEG00010005942) #27	PIGK (ENSRFEG00010005834) #28	ST6GALNAC5 (ENSRFEG00010005779) #29	ST6GALNAC3 (ENSRFEG00010005733) #30	ASB17 (ENSRFEG00010005712) #31	MSH4 (ENSRFEG00010005666) #32	RABGGTB (ENSRFEG00010005569) #33	ACADM (ENSRFEG00010005513) #34	SLC44A5 (ENSRFEG00010005444) #35	LHX8 (ENSRFEG00010005406) #36
Microbat	MODERN SPECIES	962	RPF1 (ENSMLUG00000016028)	DNASE2B (ENSMLUG00000016019)	ENSMLUG00000025448	ENSMLUG00000026964	PRKACB (ENSMLUG00000003326)	TTLL7 (ENSMLUG00000009405)	ENSMLUG00000028126	ADGRL2 (ENSMLUG00000014302) #8	ENSMLUG00000026696	ADGRL4 (ENSMLUG00000004153) #12	IFI44 (ENSMLUG00000025243) #14	IFI44L (ENSMLUG00000008652) #15	PTGFR (ENSMLUG00000008646) #16	GIPC2 (ENSMLUG00000008628) #19	DNAJB4 (ENSMLUG00000023787) #21	FUBP1 (ENSMLUG00000014802) #22	NEXN (ENSMLUG00000004068) #23	MIGA1 (ENSMLUG00000011871) #24	USP33 (ENSMLUG00000011846) #25	ENSMLUG00000028620	ZZZ3 (ENSMLUG00000006175) #26	AK5 (ENSMLUG00000006157) #27	PIGK (ENSMLUG00000022923) #28	ST6GALNAC5 (ENSMLUG00000000039) #29	ENSMLUG00000006376	ASB17 (ENSMLUG00000025222) #31	MSH4 (ENSMLUG00000009224) #32	RABGGTB (ENSMLUG00000000539) #33	ACADM (ENSMLUG00000003015) #34	SLC44A5 (ENSMLUG00000001758) #35	LHX8 (ENSMLUG00000001749) #36
Megabat	MODERN SPECIES	1742															GIPC2 (ENSPVAG00000014641) #19	FUBP1 (ENSPVAG00000014637) #22	NEXN (ENSPVAG00000014636) #23
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00990000205119	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000165774	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Felidae	ANCESTRAL SPECIES	10	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b.c	ENSGT00990000205119	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b.c	ENSGT00990000205119	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Tiger	MODERN SPECIES	126	RPF1 (ENSPTIG00000019164)	DNASE2B (ENSPTIG00000019401)	ENSPTIG00000019546	SAMD13 (ENSPTIG00000019707)	ENSPTIG00000019784	PRKACB (ENSPTIG00000020230)	TTLL7 (ENSPTIG00000007891)	ADGRL2 (ENSPTIG00000009283) #8	ENSPTIG00000016970	ADGRL4 (ENSPTIG00000017117) #12	IFI44 (ENSPTIG00000018123) #14	ENSPTIG00000018442 #15	PTGFR (ENSPTIG00000018492) #16	GIPC2 (ENSPTIG00000018974) #19	DNAJB4 (ENSPTIG00000019319) #21	FUBP1 (ENSPTIG00000019450) #22	NEXN (ENSPTIG00000020806) #23	MIGA1 (ENSPTIG00000002757) #24	USP33 (ENSPTIG00000006169) #25	ZZZ3 (ENSPTIG00000008548) #26	AK5 (ENSPTIG00000008835) #27	PIGK (ENSPTIG00000009318) #28	ST6GALNAC5 (ENSPTIG00000010635) #29	ENSPTIG00000001675	ST6GALNAC3 (ENSPTIG00000010786) #30	ENSPTIG00000001705	ASB17 (ENSPTIG00000011003) #31	MSH4 (ENSPTIG00000011108) #32	RABGGTB (ENSPTIG00000011328) #33	ACADM (ENSPTIG00000011849) #34	SLC44A5 (ENSPTIG00000013396) #35
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b.c	ENSGT00990000205119	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000158947.f	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00940000153414.A.s.a	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
leopard	MODERN SPECIES	62	ENSPPRG00000010218	ENSPPRG00000010285	ENSPPRG00000010565	ENSPPRG00000021431	PRKACB (ENSPPRG00000015792)	TTLL7 (ENSPPRG00000024394)	ENSPPRG00000024293	ADGRL2 (ENSPPRG00000009129) #8	ENSPPRG00000009975	ENSPPRG00000021997	ADGRL4 (ENSPPRG00000010360) #12	IFI44 (ENSPPRG00000011096) #14	PTGFR (ENSPPRG00000011472) #16	GIPC2 (ENSPPRG00000022599) #19	DNAJB4 (ENSPPRG00000023753) #21	FUBP1 (ENSPPRG00000000413) #22	NEXN (ENSPPRG00000002446) #23	MIGA1 (ENSPPRG00000003851) #24	USP33 (ENSPPRG00000007621) #25	ZZZ3 (ENSPPRG00000008231) #26	AK5 (ENSPPRG00000008493) #27
Eulipotyphla	ANCESTRAL SPECIES	200														ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23
Common shrew	MODERN SPECIES	4234														GIPC2 (ENSSARG00000011806) #19	ENSSARG00000011767 #21	FUBP1 (ENSSARG00000011730) #22	NEXN (ENSSARG00000011706) #23
Hedgehog	MODERN SPECIES	5443																FUBP1 (ENSEEUG00000001287) #22	NEXN (ENSEEUG00000001261) #23
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Glires	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Rodentia	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826.r #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B.z #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Marmotini	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000238694	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826.r #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B.z.a #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Marmotini_b	ANCESTRAL SPECIES	105										ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826.r #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B.z.a #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Squirrel	MODERN SPECIES	171											ADGRL4 (ENSSTOG00000021389) #12	IFI44 (ENSSTOG00000013516) #14	PTGFR (ENSSTOG00000001209) #16	GIPC2 (ENSSTOG00000014338) #19	DNAJB4 (ENSSTOG00000014327) #21	FUBP1 (ENSSTOG00000014312) #22	NEXN (ENSSTOG00000014300) #23	MIGA1 (ENSSTOG00000004076) #24	USP33 (ENSSTOG00000014241) #25	ZZZ3 (ENSSTOG00000016454) #26	AK5 (ENSSTOG00000016450) #27	PIGK (ENSSTOG00000015226) #28	ST6GALNAC5 (ENSSTOG00000015222) #29	ST6GALNAC3 (ENSSTOG00000015683) #30	ASB17 (ENSSTOG00000016248) #31	MSH4 (ENSSTOG00000016243) #32	ENSSTOG00000021824 #33	ENSSTOG00000006336	ENSSTOG00000020981	SLC44A5 (ENSSTOG00000006287) #35	LHX8 (ENSSTOG00000023898) #36
Arctic ground squirrel	MODERN SPECIES	14										ADGRL4 (ENSUPAG00010015695) #12	IFI44 (ENSUPAG00010015676) #14	IFI44L (ENSUPAG00010015653) #15	PTGFR (ENSUPAG00010015635) #16	GIPC2 (ENSUPAG00010015617) #19	DNAJB4 (ENSUPAG00010015599) #21	FUBP1 (ENSUPAG00010015473) #22	NEXN (ENSUPAG00010015390) #23	MIGA1 (ENSUPAG00010015305) #24	USP33 (ENSUPAG00010015247) #25	ZZZ3 (ENSUPAG00010015144) #26	AK5 (ENSUPAG00010015115) #27	PIGK (ENSUPAG00010015091) #28	ST6GALNAC5 (ENSUPAG00010015077) #29	ST6GALNAC3 (ENSUPAG00010015056) #30	ASB17 (ENSUPAG00010015039) #31	MSH4 (ENSUPAG00010014986) #32	ENSUPAG00010014929 #33	ACADM (ENSUPAG00010014892) #34	SLC44A5 (ENSUPAG00010014841) #35	LHX8 (ENSUPAG00010014818) #36	TYW3 (ENSUPAG00010014776)
Alpin marmot	MODERN SPECIES	27					ADGRL2 (ENSMMMG00000002122) #8	ENSMMMG00000002015	ENSMMMG00000002007	ADGRL4 (ENSMMMG00000001965) #12	IFI44 (ENSMMMG00000001876) #14	IFI44L (ENSMMMG00000001818) #15	PTGFR (ENSMMMG00000001803) #16	ENSMMMG00000001793	GIPC2 (ENSMMMG00000001774) #19	ENSMMMG00000001769 #20	DNAJB4 (ENSMMMG00000001741) #21	FUBP1 (ENSMMMG00000001582) #22	NEXN (ENSMMMG00000001383) #23	MIGA1 (ENSMMMG00000001232) #24	USP33 (ENSMMMG00000001079) #25	ZZZ3 (ENSMMMG00000001008) #26	AK5 (ENSMMMG00000000978) #27	PIGK (ENSMMMG00000000954) #28	ST6GALNAC5 (ENSMMMG00000000879) #29	ST6GALNAC3 (ENSMMMG00000000833) #30	ASB17 (ENSMMMG00000000815) #31	MSH4 (ENSMMMG00000000736) #32	ENSMMMG00000000695 #33	ACADM (ENSMMMG00000000664) #34	ENSMMMG00000000643 #35	LHX8 (ENSMMMG00000000607) #36	TYW3 (ENSMMMG00000000575)
Eurasian red squirrel	MODERN SPECIES		DNASE2B (ENSSVLG00005000189)	ENSSVLG00005000176	SAMD13 (ENSSVLG00005000161)	PRKACB (ENSSVLG00005023190)	TTLL7 (ENSSVLG00005022891)	ADGRL2 (ENSSVLG00005022731) #8	ADGRL4 (ENSSVLG00005022352) #12	IFI44 (ENSSVLG00005022202) #14	IFI44L (ENSSVLG00005022109) #15	PTGFR (ENSSVLG00005022071) #16	ENSSVLG00005022018	GIPC2 (ENSSVLG00005021955) #19	ENSSVLG00005021924 #20	DNAJB4 (ENSSVLG00005021899) #21	ENSSVLG00005021876 #21	FUBP1 (ENSSVLG00005021850) #22	NEXN (ENSSVLG00005021783) #23	MIGA1 (ENSSVLG00005021690) #24	USP33 (ENSSVLG00005021486) #25	ZZZ3 (ENSSVLG00005021295) #26	AK5 (ENSSVLG00005021163) #27	PIGK (ENSSVLG00005021025) #28	ST6GALNAC5 (ENSSVLG00005020967) #29	ST6GALNAC3 (ENSSVLG00005020906) #30	ENSSVLG00005020843	ASB17 (ENSSVLG00005020808) #31	MSH4 (ENSSVLG00005020643) #32	RABGGTB (ENSSVLG00005020498) #33	ACADM (ENSSVLG00005020244) #34	SLC44A5 (ENSSVLG00005019739) #35	LHX8 (ENSSVLG00005019479) #36
Hystricomorpha	ANCESTRAL SPECIES	44	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Degu	DUPLICATION
Degu	MODERN SPECIES	208										ADGRL4 (ENSODEG00000003241) #12	ENSODEG00000018917	PTGFR (ENSODEG00000003205) #16	ENSODEG00000003189	GIPC2 (ENSODEG00000002950) #19	ENSODEG00000002929 #21	ENSODEG00000002600 #22	NEXN (ENSODEG00000003578) #23	MIGA1 (ENSODEG00000003282) #24	ENSODEG00000003224 #25	ZZZ3 (ENSODEG00000003077) #26	AK5 (ENSODEG00000002917) #27	PIGK (ENSODEG00000002877) #28	ST6GALNAC5 (ENSODEG00000002631) #29	ENSODEG00000002611	ENSODEG00000018945 #30	ENSODEG00000002590	ENSODEG00000018821	ENSODEG00000002513	ENSODEG00000002447	ARHGEF6 (ENSODEG00000003144)	CD40LG (ENSODEG00000002959)
Degu	MODERN SPECIES	185																ENSODEG00000003657 #22	PRRX1 (ENSODEG00000003609)	GORAB (ENSODEG00000003575)	NTMT2 (ENSODEG00000003278)	KIFAP3 (ENSODEG00000003030)	ENSODEG00000004619	ENSODEG00000004584	ENSODEG00000019065	CCNY (ENSODEG00000004550)	GJD4 (ENSODEG00000004448)	FZD8 (ENSODEG00000019358)	ENSODEG00000004409	ENSODEG00000004390	ENSODEG00000004382	ENSODEG00000004245	NRP1 (ENSODEG00000004113)
Long-tailed chinchilla	MODERN SPECIES	130	CTBS (ENSCLAG00000013866)	ENSCLAG00000009170	ENSCLAG00000006867	RPF1 (ENSCLAG00000007607)	ENSCLAG00000003910	DNASE2B (ENSCLAG00000004420)	SAMD13 (ENSCLAG00000004824)	ENSCLAG00000005050	PRKACB (ENSCLAG00000005809)	TTLL7 (ENSCLAG00000006882)	ADGRL2 (ENSCLAG00000009367) #8	ADGRL4 (ENSCLAG00000011340) #12	PTGFR (ENSCLAG00000007068) #16	GIPC2 (ENSCLAG00000004082) #19	DNAJB4 (ENSCLAG00000004442) #21	FUBP1 (ENSCLAG00000005621) #22	NEXN (ENSCLAG00000005059) #23	MIGA1 (ENSCLAG00000004098) #24	USP33 (ENSCLAG00000004816) #25	ZZZ3 (ENSCLAG00000006453) #26	AK5 (ENSCLAG00000007719) #27	ENSCLAG00000005643	ENSCLAG00000006246	PIGK (ENSCLAG00000006276) #28	ST6GALNAC5 (ENSCLAG00000006546) #29	ST6GALNAC3 (ENSCLAG00000006847) #30	ASB17 (ENSCLAG00000007188) #31	MSH4 (ENSCLAG00000007368) #32	RABGGTB (ENSCLAG00000009298) #33	ACADM (ENSCLAG00000010619) #34	SLC44A5 (ENSCLAG00000010286) #35
Guinea pig	MODERN SPECIES	2	ENSCPOG00000033072	ENSCPOG00000019991	ENSCPOG00000030942	RPF1 (ENSCPOG00000014316)	DNASE2B (ENSCPOG00000011531)	ENSCPOG00000024987	SAMD13 (ENSCPOG00000031933)	PRKACB (ENSCPOG00000036250)	TTLL7 (ENSCPOG00000009630)	ENSCPOG00000024579	ADGRL2 (ENSCPOG00000002947) #8	ADGRL4 (ENSCPOG00000010776) #12	PTGFR (ENSCPOG00000036183) #16	GIPC2 (ENSCPOG00000000873) #19	DNAJB4 (ENSCPOG00000010555) #21	FUBP1 (ENSCPOG00000002757) #22	NEXN (ENSCPOG00000002750) #23	MIGA1 (ENSCPOG00000012285) #24	USP33 (ENSCPOG00000003926) #25	ZZZ3 (ENSCPOG00000031187) #26	AK5 (ENSCPOG00000003133) #27	PIGK (ENSCPOG00000011874) #28	ST6GALNAC5 (ENSCPOG00000011868) #29	ST6GALNAC3 (ENSCPOG00000030630) #30	ASB17 (ENSCPOG00000011485) #31	MSH4 (ENSCPOG00000001103) #32	RABGGTB (ENSCPOG00000000664) #33	ACADM (ENSCPOG00000011134) #34	SLC44A5 (ENSCPOG00000000895) #35	LHX8 (ENSCPOG00000000893) #36	ENSCPOG00000034855
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	10	PRKACB (ENSHGLG00000037604)	TTLL7 (ENSHGLG00000004763)	ENSHGLG00000004615	ENSHGLG00000005941	ENSHGLG00000014280	ENSHGLG00000049492	ENSHGLG00000008691 #8	ENSHGLG00000050080	ENSHGLG00000020333	ENSHGLG00000021211	ELTD1 (ENSHGLG00000010852) #12	PTGFR (ENSHGLG00000037851) #16	GIPC2 (ENSHGLG00000040596) #19	ENSHGLG00000042164	DNAJB4 (ENSHGLG00000011595) #21	ENSHGLG00000008415 #22	NEXN (ENSHGLG00000004385) #23	MIGA1 (ENSHGLG00000005514) #24	USP33 (ENSHGLG00000006541) #25	ENSHGLG00000036275	ZZZ3 (ENSHGLG00000007618) #26	AK5 (ENSHGLG00000008242) #27	PIGK (ENSHGLG00000004661) #28	ST6GALNAC5 (ENSHGLG00000004749) #29	ENSHGLG00000034054	ENSHGLG00000045681	ENSHGLG00000034547	ST6GALNAC3 (ENSHGLG00000004799) #30	ASB17 (ENSHGLG00000004852) #31	MSH4 (ENSHGLG00000005307) #32	ENSHGLG00000005990 #33
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000001627	ENSHGLG00000005636	ENSHGLG00000004898	SARAF (ENSHGLG00000004133)	ENSHGLG00000004030	ENSHGLG00000003828	ENSHGLG00000043902	ENSHGLG00000040893	ENSHGLG00000045110	ENSHGLG00000003279	ENSHGLG00000041340	PPP1R3B (ENSHGLG00000032439)	ENSHGLG00000038493	ERI1 (ENSHGLG00000002928)	ENSHGLG00000002892	ENSHGLG00000002808 #22	ENSHGLG00000007100	ENSHGLG00000006746	CLDN23 (ENSHGLG00000037723)	ENSHGLG00000041065	ENSHGLG00000006007	ENSHGLG00000005681	ENSHGLG00000010695	ENSHGLG00000040172	DLC1 (ENSHGLG00000004056)	C8orf48 (ENSHGLG00000036967)	ENSHGLG00000045911	SGCZ (ENSHGLG00000003835)	ENSHGLG00000003696	ENSHGLG00000003503	ENSHGLG00000003353
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Muroidea	ANCESTRAL SPECIES	6	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b.uc	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Chinese hamster chok1gshd	MODERN SPECIES	219	Spata1 (ENSCGRG00001008771)	ENSCGRG00001011533	Rpf1 (ENSCGRG00001001189)	Dnase2b (ENSCGRG00001000256)	Uox (ENSCGRG00001021254)	4930503B20Rik (ENSCGRG00001018506)	Samd13 (ENSCGRG00001015430)	PRKACB (ENSCGRG00001022775)	Ttll7 (ENSCGRG00001012935)	Adgrl2 (ENSCGRG00001003175) #8	Adgrl4 (ENSCGRG00001000370) #12	Ifi44 (ENSCGRG00001024261) #14	Ptgfr (ENSCGRG00001024153) #16	Gipc2 (ENSCGRG00001023752) #19	Dnajb4 (ENSCGRG00001022849) #21	Fubp1 (ENSCGRG00001007103) #22	Nexn (ENSCGRG00001020243) #23	Miga1 (ENSCGRG00001014599) #24	Usp33 (ENSCGRG00001009888) #25	Zzz3 (ENSCGRG00001018107) #26	Ak5 (ENSCGRG00001007295) #27	Pigk (ENSCGRG00001004016) #28	St6galnac5 (ENSCGRG00001000655) #29	St6galnac3 (ENSCGRG00001021202) #30	Asb17 (ENSCGRG00001019617) #31	Msh4 (ENSCGRG00001016582) #32	Rabggtb (ENSCGRG00001015396) #33	Acadm (ENSCGRG00001014947) #34	ENSCGRG00001011523 #35	Lhx8 (ENSCGRG00001023560) #36	Tyw3 (ENSCGRG00001022820)
Golden Hamster	MODERN SPECIES	769											Adgrl2 (ENSMAUG00000000262) #8	Ifi44 (ENSMAUG00000012413) #14	Ptgfr (ENSMAUG00000013922) #16	Gipc2 (ENSMAUG00000013277) #19	Dnajb4 (ENSMAUG00000013602) #21	Fubp1 (ENSMAUG00000016428) #22	Nexn (ENSMAUG00000018088) #23	Miga1 (ENSMAUG00000003230) #24	Usp33 (ENSMAUG00000019323) #25	ENSMAUG00000010117 #26	Ak5 (ENSMAUG00000007957) #27	Pigk (ENSMAUG00000012491) #28	St6galnac5 (ENSMAUG00000000623) #29
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00900000143848	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000147767	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Northern American deer mouse	MODERN SPECIES	19	Uox (ENSPEMG00000023036)	ENSPEMG00000028095	4930503B20Rik (ENSPEMG00000023951)	Prkacb (ENSPEMG00000030921)	ENSPEMG00000024491	Ttll7 (ENSPEMG00000021600)	ENSPEMG00000022352	Adgrl2 (ENSPEMG00000021407) #8	ENSPEMG00000030917	Adgrl4 (ENSPEMG00000020379) #12	Ifi44 (ENSPEMG00000020837) #14	ENSPEMG00000030105 #15	Ptgfr (ENSPEMG00000029819) #16	Gipc2 (ENSPEMG00000009983) #19	Dnajb4 (ENSPEMG00000021113) #21	Fubp1 (ENSPEMG00000021802) #22	ENSPEMG00000029947 #23	Miga1 (ENSPEMG00000010727) #24	Usp33 (ENSPEMG00000022686) #25	Zzz3 (ENSPEMG00000022306) #26	Ak5 (ENSPEMG00000021131) #27	Pigk (ENSPEMG00000021402) #28	St6galnac5 (ENSPEMG00000021050) #29	St6galnac3 (ENSPEMG00000022590) #30	Asb17 (ENSPEMG00000024794) #31	Msh4 (ENSPEMG00000000153) #32	Rabggtb (ENSPEMG00000014644) #33	Acadm (ENSPEMG00000009616) #34	Slc44a5 (ENSPEMG00000018249) #35	Lhx8 (ENSPEMG00000015170) #36	Tyw3 (ENSPEMG00000013100)
Prairie vole	MODERN SPECIES	8									Adgrl2 (ENSMOCG00000010000) #8	ENSMOCG00000013633	Adgrl4 (ENSMOCG00000022990) #12	Ptgfr (ENSMOCG00000020982) #16	Gipc2 (ENSMOCG00000020321) #19	ENSMOCG00000008802 #20	Dnajb4 (ENSMOCG00000003251) #21	Fubp1 (ENSMOCG00000014751) #22	Nexn (ENSMOCG00000018832) #23	Miga1 (ENSMOCG00000003302) #24	Usp33 (ENSMOCG00000020183) #25	ENSMOCG00000014734 #26	Ak5 (ENSMOCG00000002919) #27	Pigk (ENSMOCG00000015315) #28	St6galnac5 (ENSMOCG00000013619) #29	ENSMOCG00000007109	St6galnac3 (ENSMOCG00000002487) #30	Asb17 (ENSMOCG00000018775) #31	Msh4 (ENSMOCG00000012800) #32	Rabggtb (ENSMOCG00000011248) #33	Acadm (ENSMOCG00000016809) #34	Slc44a5 (ENSMOCG00000020401) #35	Lhx8 (ENSMOCG00000011686) #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Mus	ANCESTRAL SPECIES	7	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Mouse	MODERN SPECIES	12	Gng5 (ENSMUSG00000068523)	Rpf1 (ENSMUSG00000028187)	Uox (ENSMUSG00000028186)	Dnase2b (ENSMUSG00000028185)	4930503B20Rik (ENSMUSG00000090202)	Samd13 (ENSMUSG00000048652)	Prkacb (ENSMUSG00000005034)	Ttll7 (ENSMUSG00000036745)	Adgrl2 (ENSMUSG00000028184) #8	Adgrl4 (ENSMUSG00000039167) #12	Ifi44 (ENSMUSG00000028037) #14	Ifi44l (ENSMUSG00000039146) #15	Ptgfr (ENSMUSG00000028036) #16	Gipc2 (ENSMUSG00000039131) #19	Dnajb4 (ENSMUSG00000028035) #21	Fubp1 (ENSMUSG00000028034) #22	Nexn (ENSMUSG00000039103) #23	Miga1 (ENSMUSG00000054942) #24	Usp33 (ENSMUSG00000025437) #25	Zzz3 (ENSMUSG00000039068) #26	Ak5 (ENSMUSG00000039058) #27	Pigk (ENSMUSG00000039047) #28	St6galnac5 (ENSMUSG00000039037) #29	St6galnac3 (ENSMUSG00000052544) #30	Asb17 (ENSMUSG00000038997) #31	Msh4 (ENSMUSG00000005493) #32	Rabggtb (ENSMUSG00000038975) #33	Acadm (ENSMUSG00000062908) #34	Slc44a5 (ENSMUSG00000028360) #35	Lhx8 (ENSMUSG00000096225) #36	Tyw3 (ENSMUSG00000047583)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
spretus	MODERN SPECIES	12	MGP_SPRETEiJ_G0026678	Rpf1 (MGP_SPRETEiJ_G0026679)	Uox (MGP_SPRETEiJ_G0026680)	Dnase2b (MGP_SPRETEiJ_G0026681)	4930503B20Rik (MGP_SPRETEiJ_G0026682)	Samd13 (MGP_SPRETEiJ_G0026683)	Prkacb (MGP_SPRETEiJ_G0026684)	Ttll7 (MGP_SPRETEiJ_G0026685)	Adgrl2 (MGP_SPRETEiJ_G0026686) #8	Adgrl4 (MGP_SPRETEiJ_G0026687) #12	Ifi44 (MGP_SPRETEiJ_G0026688) #14	Ifi44l (MGP_SPRETEiJ_G0026689) #15	Ptgfr (MGP_SPRETEiJ_G0026690) #16	Gipc2 (MGP_SPRETEiJ_G0026691) #19	MGP_SPRETEiJ_G0026692	Fubp1 (MGP_SPRETEiJ_G0026693) #22	Nexn (MGP_SPRETEiJ_G0026694) #23	Miga1 (MGP_SPRETEiJ_G0026695) #24	Usp33 (MGP_SPRETEiJ_G0026696) #25	Zzz3 (MGP_SPRETEiJ_G0026697) #26	Ak5 (MGP_SPRETEiJ_G0026698) #27	Pigk (MGP_SPRETEiJ_G0026699) #28	St6galnac5 (MGP_SPRETEiJ_G0026700) #29	St6galnac3 (MGP_SPRETEiJ_G0026701) #30	Asb17 (MGP_SPRETEiJ_G0026702) #31	Msh4 (MGP_SPRETEiJ_G0026703) #32	Rabggtb (MGP_SPRETEiJ_G0026704) #33	MGP_SPRETEiJ_G0026705 #34	Slc44a5 (MGP_SPRETEiJ_G0026706) #35	Lhx8 (MGP_SPRETEiJ_G0026707) #36	Tyw3 (MGP_SPRETEiJ_G0026708)
Steppe mouse	MODERN SPECIES	2102													Gipc2 (ENSMSIG00000024388) #19	ENSMSIG00000024386 #20	Dnajb4 (ENSMSIG00000024374) #21	Fubp1 (ENSMSIG00000024180) #22	Nexn (ENSMSIG00000024045) #23	Miga1 (ENSMSIG00000023995) #24
Ryukyu mouse	MODERN SPECIES	12	MGP_CAROLIEiJ_G0025725	Rpf1 (MGP_CAROLIEiJ_G0025726)	Uox (MGP_CAROLIEiJ_G0025727)	Dnase2b (MGP_CAROLIEiJ_G0025728)	4930503B20Rik (MGP_CAROLIEiJ_G0025729)	Samd13 (MGP_CAROLIEiJ_G0025730)	Prkacb (MGP_CAROLIEiJ_G0025731)	Ttll7 (MGP_CAROLIEiJ_G0025732)	Adgrl2 (MGP_CAROLIEiJ_G0025733) #8	Adgrl4 (MGP_CAROLIEiJ_G0025734) #12	Ifi44 (MGP_CAROLIEiJ_G0025735) #14	Ifi44l (MGP_CAROLIEiJ_G0025736) #15	Ptgfr (MGP_CAROLIEiJ_G0025737) #16	Gipc2 (MGP_CAROLIEiJ_G0025738) #19	Dnajb4 (MGP_CAROLIEiJ_G0025739) #21	Fubp1 (MGP_CAROLIEiJ_G0025740) #22	Nexn (MGP_CAROLIEiJ_G0025741) #23	Miga1 (MGP_CAROLIEiJ_G0025742) #24	Usp33 (MGP_CAROLIEiJ_G0025743) #25	Zzz3 (MGP_CAROLIEiJ_G0025744) #26	Ak5 (MGP_CAROLIEiJ_G0025745) #27	MGP_CAROLIEiJ_G0025746 #28	St6galnac5 (MGP_CAROLIEiJ_G0025747) #29	St6galnac3 (MGP_CAROLIEiJ_G0025748) #30	Asb17 (MGP_CAROLIEiJ_G0025749) #31	Msh4 (MGP_CAROLIEiJ_G0025750) #32	Rabggtb (MGP_CAROLIEiJ_G0025751) #33	Acadm (MGP_CAROLIEiJ_G0025752) #34	Slc44a5 (MGP_CAROLIEiJ_G0025753) #35	Lhx8 (MGP_CAROLIEiJ_G0025754) #36	Tyw3 (MGP_CAROLIEiJ_G0025755)
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0027176	MGP_PahariEiJ_G0027177	Uox (MGP_PahariEiJ_G0027178)	Dnase2b (MGP_PahariEiJ_G0027179)	4930503B20Rik (MGP_PahariEiJ_G0027180)	Samd13 (MGP_PahariEiJ_G0027181)	Prkacb (MGP_PahariEiJ_G0027182)	Ttll7 (MGP_PahariEiJ_G0027183)	Adgrl2 (MGP_PahariEiJ_G0027184) #8	Adgrl4 (MGP_PahariEiJ_G0027185) #12	Ifi44 (MGP_PahariEiJ_G0027186) #14	Ifi44l (MGP_PahariEiJ_G0027187) #15	Ptgfr (MGP_PahariEiJ_G0027188) #16	Gipc2 (MGP_PahariEiJ_G0027189) #19	Dnajb4 (MGP_PahariEiJ_G0027190) #21	Fubp1 (MGP_PahariEiJ_G0027191) #22	Nexn (MGP_PahariEiJ_G0027192) #23	Miga1 (MGP_PahariEiJ_G0027193) #24	Usp33 (MGP_PahariEiJ_G0027194) #25	Zzz3 (MGP_PahariEiJ_G0027195) #26	Ak5 (MGP_PahariEiJ_G0027196) #27	Pigk (MGP_PahariEiJ_G0027197) #28	St6galnac5 (MGP_PahariEiJ_G0027198) #29	St6galnac3 (MGP_PahariEiJ_G0027199) #30	Asb17 (MGP_PahariEiJ_G0027200) #31	Msh4 (MGP_PahariEiJ_G0027201) #32	Rabggtb (MGP_PahariEiJ_G0027202) #33	Acadm (MGP_PahariEiJ_G0027203) #34	Slc44a5 (MGP_PahariEiJ_G0027204) #35	Lhx8 (MGP_PahariEiJ_G0027205) #36	Tyw3 (MGP_PahariEiJ_G0027206)
Rat	MODERN SPECIES	11	Uox (ENSRNOG00000016339)	Dnase2b (ENSRNOG00000016262)	Samd13 (ENSRNOG00000016432)	Prkacb (ENSRNOG00000004978)	Ttll7 (ENSRNOG00000031997)	Adgrl2 (ENSRNOG00000065347) #8	Adgrl2 (ENSRNOG00000063253) #8	ENSRNOG00000067115	AABR07013776.1 (ENSRNOG00000048082)	Adgrl4 (ENSRNOG00000033940) #12	Ifi44 (ENSRNOG00000022218) #14	Ifi44l (ENSRNOG00000049994) #15	Ptgfr (ENSRNOG00000046468) #16	Gipc2 (ENSRNOG00000042152) #19	Dnajb4 (ENSRNOG00000013011) #21	Fubp1 (ENSRNOG00000043370) #22	Nexn (ENSRNOG00000012512) #23	Miga1 (ENSRNOG00000056332) #24	Usp33 (ENSRNOG00000011294) #25	Zzz3 (ENSRNOG00000050321) #26	Ak5 (ENSRNOG00000046947) #27	Pigk (ENSRNOG00000042359) #28	St6galnac5 (ENSRNOG00000049676) #29	St6galnac3 (ENSRNOG00000056894) #30	Asb17 (ENSRNOG00000048832) #31	Msh4 (ENSRNOG00000010431) #32	Rabggtb (ENSRNOG00000009992) #33	Acadm (ENSRNOG00000009845) #34	Slc44a5 (ENSRNOG00000042332) #35	Lhx8 (ENSRNOG00000028348) #36	Tyw3 (ENSRNOG00000028328)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1449													Ptgfr (ENSNGAG00000000646) #16	Gipc2 (ENSNGAG00000001139) #19	Dnajb4 (ENSNGAG00000011727) #21	Fubp1 (ENSNGAG00000014302) #22	Nexn (ENSNGAG00000023009) #23	Miga1 (ENSNGAG00000020851) #24	ENSNGAG00000010081 #25	ENSNGAG00000012505 #26	Ak5 (ENSNGAG00000015110) #27	Pigk (ENSNGAG00000017705) #28	St6galnac5 (ENSNGAG00000019198) #29	St6galnac3 (ENSNGAG00000006973) #30	Asb17 (ENSNGAG00000010382) #31	Msh4 (ENSNGAG00000021425) #32	Rabggtb (ENSNGAG00000021144) #33	Acadm (ENSNGAG00000022016) #34
Lesser Egyptian jerboa	MODERN SPECIES	52	ENSJJAG00000006619	ENSJJAG00000014898	ENSJJAG00000011539	Rpf1 (ENSJJAG00000018873)	Dnase2b (ENSJJAG00000009922)	Uox (ENSJJAG00000008960)	4930503B20Rik (ENSJJAG00000022696)	Samd13 (ENSJJAG00000021117)	Prkacb (ENSJJAG00000011827)	Ttll7 (ENSJJAG00000021112)	Adgrl2 (ENSJJAG00000021839) #8	Adgrl4 (ENSJJAG00000015991) #12	Ptgfr (ENSJJAG00000017381) #16	Dnajb4 (ENSJJAG00000016999) #21	Gipc2 (ENSJJAG00000010357) #19	Fubp1 (ENSJJAG00000020069) #22	Nexn (ENSJJAG00000012487) #23	Miga1 (ENSJJAG00000016762) #24	Usp33 (ENSJJAG00000016177) #25	Zzz3 (ENSJJAG00000018190) #26	Ak5 (ENSJJAG00000013593) #27	Pigk (ENSJJAG00000023897) #28	St6galnac5 (ENSJJAG00000017065) #29	St6galnac3 (ENSJJAG00000001065) #30	Asb17 (ENSJJAG00000004726) #31	Msh4 (ENSJJAG00000020666) #32	Rabggtb (ENSJJAG00000022754) #33	Acadm (ENSJJAG00000015548) #34	Slc44a5 (ENSJJAG00000003214) #35	Lhx8 (ENSJJAG00000018516) #36	ENSJJAG00000005103
Kangaroo rat	MODERN SPECIES	358	ENSDORG00000024192	Rpf1 (ENSDORG00000000607)	Dnase2b (ENSDORG00000000604)	Uox (ENSDORG00000027583)	4930503B20Rik (ENSDORG00000029007)	Samd13 (ENSDORG00000026931)	Prkacb (ENSDORG00000004341)	Ttll7 (ENSDORG00000012053)	Adgrl2 (ENSDORG00000005436) #8	Adgrl4 (ENSDORG00000000288) #12	Ifi44 (ENSDORG00000027792) #14	Ptgfr (ENSDORG00000025401) #16	ENSDORG00000024167	Gipc2 (ENSDORG00000008668) #19	Dnajb4 (ENSDORG00000027510) #21	Fubp1 (ENSDORG00000016534) #22	Nexn (ENSDORG00000016532) #23	Miga1 (ENSDORG00000004484) #24	ENSDORG00000024229 #25	Zzz3 (ENSDORG00000010114) #26
Lagomorpha	ANCESTRAL SPECIES	73	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29
Pika	MODERN SPECIES	3866														GIPC2 (ENSOPRG00000001224) #19	DNAJB4 (ENSOPRG00000001208) #21	FUBP1 (ENSOPRG00000001175) #22	NEXN (ENSOPRG00000001149) #23	MIGA1 (ENSOPRG00000001101) #24	USP33 (ENSOPRG00000001056) #25
Tree shrew	MODERN SPECIES	4296																FUBP1 (ENSTBEG00000017333) #22	NEXN (ENSTBEG00000017034) #23	ENSTBEG00000016829	ENSTBEG00000016546 #24
Primates	ANCESTRAL SPECIES	4	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Hominidae	ANCESTRAL SPECIES	3	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Orangutan	MODERN SPECIES		DNASE2B (ENSPPYG00000001207)	ENSPPYG00000038224	ENSPPYG00000030371	ENSPPYG00000041194	PRKACB (ENSPPYG00000001209)	TTLL7 (ENSPPYG00000001210)	ADGRL2 (ENSPPYG00000001211) #8	ENSPPYG00000041068	ENSPPYG00000041170	ADGRL4 (ENSPPYG00000001213) #12	IFI44 (ENSPPYG00000001214) #14	IFI44L (ENSPPYG00000001215) #15	ENSPPYG00000001216 #16	GIPC2 (ENSPPYG00000001218) #19	DNAJB4 (ENSPPYG00000001217) #21	FUBP1 (ENSPPYG00000001219) #22	NEXN (ENSPPYG00000001220) #23	MIGA1 (ENSPPYG00000001221) #24	USP33 (ENSPPYG00000001222) #25	ZZZ3 (ENSPPYG00000001223) #26	AK5 (ENSPPYG00000001224) #27	PIGK (ENSPPYG00000001225) #28	ST6GALNAC5 (ENSPPYG00000001226) #29	ST6GALNAC3 (ENSPPYG00000030574) #30	ASB17 (ENSPPYG00000001228) #31	MSH4 (ENSPPYG00000032071) #32	RABGGTB (ENSPPYG00000001230) #33	ACADM (ENSPPYG00000001231) #34	ENSPPYG00000033221	SLC44A5 (ENSPPYG00000001232) #35	LHX8 (ENSPPYG00000001233) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00910000147361	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00930000151014.h.b	ENSGT00940000158429 #34
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00930000151014.h.b	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Human	MODERN SPECIES		CTBS (ENSG00000117151)	SPATA1 (ENSG00000122432)	GNG5 (ENSG00000174021)	RPF1 (ENSG00000117133)	DNASE2B (ENSG00000137976)	SAMD13 (ENSG00000203943)	PRKACB (ENSG00000142875)	TTLL7 (ENSG00000137941)	ADGRL2 (ENSG00000117114) #8	ADGRL4 (ENSG00000162618) #12	IFI44 (ENSG00000137965) #14	IFI44L (ENSG00000137959) #15	PTGFR (ENSG00000122420) #16	GIPC2 (ENSG00000137960) #19	DNAJB4 (ENSG00000162616) #21	FUBP1 (ENSG00000162613) #22	NEXN (ENSG00000162614) #23	MIGA1 (ENSG00000180488) #24	USP33 (ENSG00000077254) #25	ZZZ3 (ENSG00000036549) #26	AK5 (ENSG00000154027) #27	PIGK (ENSG00000142892) #28	ST6GALNAC5 (ENSG00000117069) #29	ST6GALNAC3 (ENSG00000184005) #30	ASB17 (ENSG00000154007) #31	MSH4 (ENSG00000057468) #32	RABGGTB (ENSG00000137955) #33	ACADM (ENSG00000117054) #34	SLC44A5 (ENSG00000137968) #35	LHX8 (ENSG00000162624) #36	TYW3 (ENSG00000162623)
Gibbon	MODERN SPECIES	2	ENSNLEG00000028021	SAMD13 (ENSNLEG00000009912)	PRKACB (ENSNLEG00000009888)	ENSNLEG00000009911	TTLL7 (ENSNLEG00000009865)	ADGRL2 (ENSNLEG00000009826) #8	ENSNLEG00000033982	ENSNLEG00000031776	ENSNLEG00000032666	ENSNLEG00000027320	ADGRL4 (ENSNLEG00000009814) #12	ENSNLEG00000033334	PTGFR (ENSNLEG00000009807) #16	GIPC2 (ENSNLEG00000009804) #19	DNAJB4 (ENSNLEG00000009801) #21	FUBP1 (ENSNLEG00000009772) #22	NEXN (ENSNLEG00000009754) #23	MIGA1 (ENSNLEG00000009735) #24	USP33 (ENSNLEG00000009694) #25	ZZZ3 (ENSNLEG00000009672) #26	AK5 (ENSNLEG00000009654) #27	PIGK (ENSNLEG00000009640) #28	ST6GALNAC5 (ENSNLEG00000009631) #29	ENSNLEG00000035293	ST6GALNAC3 (ENSNLEG00000033065) #30	ASB17 (ENSNLEG00000009629) #31	MSH4 (ENSNLEG00000009618) #32	RABGGTB (ENSNLEG00000009609) #33	ACADM (ENSNLEG00000009583) #34	ENSNLEG00000029815	ENSNLEG00000035660
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34
Cercopithecinae	ANCESTRAL SPECIES		ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00390000000970.b.t.a	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34
Macaca	ANCESTRAL SPECIES		ENSGT00940000159078	ENSGT00910000147474	ENSGT01050000245180.a.d	ENSGT00940000156348.C #8	ENSGT00910000148845	ENSGT00940000155196.q.b.b	ENSGT00940000153241.A.k.a.b.a	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000000970.b.t.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000167496	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Pig-tailed macaque	MODERN SPECIES	582	ENSMNEG00000003918	ENSMNEG00000039866	ADGRL2 (ENSMNEG00000040134) #8	ENSMNEG00000025085	ENSMNEG00000001649	ENSMNEG00000032630	ENSMNEG00000042387	ADGRL4 (ENSMNEG00000035199) #12	IFI44 (ENSMNEG00000033036) #14	ENSMNEG00000041066	IFI44L (ENSMNEG00000010138) #15	PTGFR (ENSMNEG00000045057) #16	ENSMNEG00000033150	GIPC2 (ENSMNEG00000032547) #19	DNAJB4 (ENSMNEG00000032625) #21	FUBP1 (ENSMNEG00000045212) #22	NEXN (ENSMNEG00000040010) #23	ENSMNEG00000028884	MIGA1 (ENSMNEG00000039340) #24	USP33 (ENSMNEG00000034242) #25	ZZZ3 (ENSMNEG00000039203) #26	AK5 (ENSMNEG00000022141) #27	PIGK (ENSMNEG00000042529) #28	ST6GALNAC5 (ENSMNEG00000035310) #29	ST6GALNAC3 (ENSMNEG00000017236) #30	ASB17 (ENSMNEG00000037040) #31	MSH4 (ENSMNEG00000044418) #32	RABGGTB (ENSMNEG00000035246) #33	ACADM (ENSMNEG00000041060) #34	SLC44A5 (ENSMNEG00000002395) #35	LHX8 (ENSMNEG00000019151) #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT01050000245180.a.d	ENSGT00940000156348.C #8	ENSGT00940000153241.A.k.a.b.a	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00940000164709.a.b.b.a.a.b.a.a.a.a.a.a.b	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Rhesus	MODERN SPECIES		UOX (ENSMMUG00000000404)	SAMD13 (ENSMMUG00000000402)	PRKACB (ENSMMUG00000003457)	TTLL7 (ENSMMUG00000016591)	ENSMMUG00000057763	ENSMMUG00000057772	ADGRL2 (ENSMMUG00000002516) #8	ENSMMUG00000060674	ENSMMUG00000018263	ADGRL4 (ENSMMUG00000023345) #12	IFI44 (ENSMMUG00000002350) #14	IFI44L (ENSMMUG00000001569) #15	PTGFR (ENSMMUG00000010594) #16	GIPC2 (ENSMMUG00000049326) #19	DNAJB4 (ENSMMUG00000050425) #21	FUBP1 (ENSMMUG00000002899) #22	NEXN (ENSMMUG00000010352) #23	ENSMMUG00000062662	MIGA1 (ENSMMUG00000011987) #24	USP33 (ENSMMUG00000018326) #25	ZZZ3 (ENSMMUG00000063855) #26	AK5 (ENSMMUG00000020218) #27	ENSMMUG00000053069	ENSMMUG00000020200	PIGK (ENSMMUG00000020217) #28	ST6GALNAC5 (ENSMMUG00000005994) #29	ENSMMUG00000047939	ST6GALNAC3 (ENSMMUG00000005990) #30	ASB17 (ENSMMUG00000018695) #31	MSH4 (ENSMMUG00000000875) #32	RABGGTB (ENSMMUG00000000873) #33
Crab-eating macaque	MODERN SPECIES		RPF1 (ENSMFAG00000003788)	DNASE2B (ENSMFAG00000039951)	ENSMFAG00000000740	SAMD13 (ENSMFAG00000058168)	PRKACB (ENSMFAG00000044118)	TTLL7 (ENSMFAG00000042407)	ENSMFAG00000043283	ADGRL2 (ENSMFAG00000035421) #8	ENSMFAG00000007031	ADGRL4 (ENSMFAG00000032806) #12	IFI44 (ENSMFAG00000037846) #14	IFI44L (ENSMFAG00000035946) #15	PTGFR (ENSMFAG00000041229) #16	GIPC2 (ENSMFAG00000059582) #19	DNAJB4 (ENSMFAG00000039494) #21	FUBP1 (ENSMFAG00000031825) #22	NEXN (ENSMFAG00000002199) #23	ENSMFAG00000060505	MIGA1 (ENSMFAG00000042126) #24	USP33 (ENSMFAG00000046123) #25	ZZZ3 (ENSMFAG00000043408) #26	AK5 (ENSMFAG00000043368) #27	PIGK (ENSMFAG00000033601) #28	ST6GALNAC5 (ENSMFAG00000041884) #29	ENSMFAG00000039614	ST6GALNAC3 (ENSMFAG00000038282) #30	ENSMFAG00000060954	ASB17 (ENSMFAG00000044899) #31	MSH4 (ENSMFAG00000038806) #32	ACADM (ENSMFAG00000032655) #34	SLC44A5 (ENSMFAG00000038111) #35
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00390000000970.b.t.a	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Cercopithecinae_d	ANCESTRAL SPECIES	19	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00910000147474	ENSGT01050000245180.a.d	ENSGT00940000156348.C #8	ENSGT00910000148845	ENSGT00940000153241.A.k.a.b	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00390000000970.b.t.a	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00950000183113.a.b.p	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Sooty mangabey	MODERN SPECIES	238						HELT (ENSCATG00000038980)	ENSCATG00000041086	ADGRL4 (ENSCATG00000041347) #12	ENSCATG00000031313	IFI44 (ENSCATG00000020674) #14	IFI44L (ENSCATG00000030541) #15	PTGFR (ENSCATG00000037227) #16	GIPC2 (ENSCATG00000038384) #19	ENSCATG00000039650	DNAJB4 (ENSCATG00000031058) #21	FUBP1 (ENSCATG00000042126) #22	NEXN (ENSCATG00000044536) #23	MIGA1 (ENSCATG00000040301) #24	ENSCATG00000031727	USP33 (ENSCATG00000043367) #25	ZZZ3 (ENSCATG00000044640) #26	AK5 (ENSCATG00000032005) #27	PIGK (ENSCATG00000035025) #28	ST6GALNAC5 (ENSCATG00000030623) #29	ENSCATG00000032492	ENSCATG00000040985	ST6GALNAC3 (ENSCATG00000032996) #30	ASB17 (ENSCATG00000033818) #31	MSH4 (ENSCATG00000035706) #32	RABGGTB (ENSCATG00000036765) #33	ACADM (ENSCATG00000038563) #34
Olive baboon	MODERN SPECIES		RPF1 (ENSPANG00000010052)	DNASE2B (ENSPANG00000016899)	ENSPANG00000047198	ENSPANG00000011777	SAMD13 (ENSPANG00000001347)	PRKACB (ENSPANG00000001346)	ENSPANG00000046699	TTLL7 (ENSPANG00000015224)	ADGRL2 (ENSPANG00000007567) #8	ADGRL4 (ENSPANG00000006130) #12	IFI44 (ENSPANG00000006003) #14	IFI44L (ENSPANG00000009471) #15	PTGFR (ENSPANG00000007569) #16	GIPC2 (ENSPANG00000006389) #19	DNAJB4 (ENSPANG00000014124) #21	FUBP1 (ENSPANG00000004797) #22	ENSPANG00000016164 #23	MIGA1 (ENSPANG00000022967) #24	USP33 (ENSPANG00000018416) #25	ZZZ3 (ENSPANG00000005101) #26	ENSPANG00000041316	AK5 (ENSPANG00000017674) #27	PIGK (ENSPANG00000010054) #28	ENSPANG00000032143	ST6GALNAC5 (ENSPANG00000035428) #29	ENSPANG00000049325	ENSPANG00000045108	ST6GALNAC3 (ENSPANG00000020337) #30	ENSPANG00000050680	ASB17 (ENSPANG00000022782) #31	ENSPANG00000038501
Vervet Monkey	MODERN SPECIES	12	CTBS (ENSCSAG00000001419)	SPATA1 (ENSCSAG00000001418)	ENSCSAG00000001417	DNASE2B (ENSCSAG00000001416)	ENSCSAG00000001415	SAMD13 (ENSCSAG00000001414)	PRKACB (ENSCSAG00000001413)	TTLL7 (ENSCSAG00000001411)	ADGRL2 (ENSCSAG00000001410) #8	ADGRL4 (ENSCSAG00000001409) #12	IFI44 (ENSCSAG00000001408) #14	IFI44L (ENSCSAG00000001407) #15	PTGFR (ENSCSAG00000001406) #16	GIPC2 (ENSCSAG00000001405) #19	DNAJB4 (ENSCSAG00000001403) #21	FUBP1 (ENSCSAG00000001402) #22	NEXN (ENSCSAG00000001401) #23	MIGA1 (ENSCSAG00000001400) #24	USP33 (ENSCSAG00000001399) #25	ZZZ3 (ENSCSAG00000001398) #26	AK5 (ENSCSAG00000001397) #27	PIGK (ENSCSAG00000001396) #28	ST6GALNAC5 (ENSCSAG00000001395) #29	ENSCSAG00000000153	ENSCSAG00000001394	ASB17 (ENSCSAG00000001393) #31	MSH4 (ENSCSAG00000001392) #32	RABGGTB (ENSCSAG00000001391) #33	ACADM (ENSCSAG00000001390) #34	SLC44A5 (ENSCSAG00000001389) #35	LHX8 (ENSCSAG00000001388) #36
Rhinopithecus	ANCESTRAL SPECIES	363												ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00390000000970.b.q	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000167496	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00950000183113.a.b.p
Golden snub-nosed monkey	MODERN SPECIES	2235												PTGFR (ENSRROG00000031592) #16	GIPC2 (ENSRROG00000033704) #19	ENSRROG00000039598	DNAJB4 (ENSRROG00000041610) #21	FUBP1 (ENSRROG00000043534) #22	NEXN (ENSRROG00000039278) #23	MIGA1 (ENSRROG00000035901) #24	ENSRROG00000037383	USP33 (ENSRROG00000011982) #25	ZZZ3 (ENSRROG00000037949) #26	ENSRROG00000045374 #27
Black snub-nosed monkey	MODERN SPECIES	573																FUBP1 (ENSRBIG00000042950) #22	NEXN (ENSRBIG00000032042) #23	MIGA1 (ENSRBIG00000026094) #24	ENSRBIG00000029018	USP33 (ENSRBIG00000041156) #25	ZZZ3 (ENSRBIG00000042574) #26	AK5 (ENSRBIG00000033937) #27	ENSRBIG00000036281	ENSRBIG00000009902	PIGK (ENSRBIG00000034118) #28	ST6GALNAC5 (ENSRBIG00000026022) #29	ENSRBIG00000019460	ENSRBIG00000044597	ENSRBIG00000027913 #30
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00530000064086.j	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000146844	ENSGT00390000001347.wb	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000154296.jb.b.a.b	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00530000064086.j	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000146844	ENSGT00390000001347.wb	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000154296.jb.b.a.b	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00530000064086.j	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00910000146844	ENSGT00390000001347.wb	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000154296.jb.b.a.b	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000000805.k.b.b	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35
Capuchin	MODERN SPECIES	3	ADGRL2 (ENSCCAG00000022704) #8	ENSCCAG00000011359	ENSCCAG00000028673	ENSCCAG00000021648	ENSCCAG00000010507	SERF1B (ENSCCAG00000016705)	ENSCCAG00000009909	ENSCCAG00000020900	ADGRL4 (ENSCCAG00000036750) #12	ENSCCAG00000022401	IFI44 (ENSCCAG00000025901) #14	IFI44L (ENSCCAG00000034830) #15	PTGFR (ENSCCAG00000032144) #16	GIPC2 (ENSCCAG00000036013) #19	DNAJB4 (ENSCCAG00000025488) #21	FUBP1 (ENSCCAG00000036537) #22	ENSCCAG00000023340	NEXN (ENSCCAG00000037450) #23	MIGA1 (ENSCCAG00000036798) #24	USP33 (ENSCCAG00000038065) #25	ZZZ3 (ENSCCAG00000032124) #26	AK5 (ENSCCAG00000033969) #27	ENSCCAG00000026907	ENSCCAG00000035323	ENSCCAG00000020636	PIGK (ENSCCAG00000033215) #28	ST6GALNAC5 (ENSCCAG00000022527) #29	ENSCCAG00000027183	ENSCCAG00000018853	ST6GALNAC3 (ENSCCAG00000030233) #30	ENSCCAG00000023736
Bolivian squirrel monkey	MODERN SPECIES	45	DNASE2B (ENSSBOG00000036044)	ENSSBOG00000023319	SAMD13 (ENSSBOG00000035540)	ENSSBOG00000026089	PRKACB (ENSSBOG00000032735)	TTLL7 (ENSSBOG00000022154)	ADGRL2 (ENSSBOG00000032564) #8	ENSSBOG00000035750	ENSSBOG00000021965	ADGRL4 (ENSSBOG00000023665) #12	IFI44 (ENSSBOG00000027429) #14	IFI44L (ENSSBOG00000005268) #15	PTGFR (ENSSBOG00000023342) #16	GIPC2 (ENSSBOG00000026116) #19	DNAJB4 (ENSSBOG00000029922) #21	FUBP1 (ENSSBOG00000027299) #22	NEXN (ENSSBOG00000032826) #23	MIGA1 (ENSSBOG00000023052) #24	USP33 (ENSSBOG00000022851) #25	ENSSBOG00000022561 #26	AK5 (ENSSBOG00000031653) #27	ENSSBOG00000031945	PIGK (ENSSBOG00000028435) #28	ST6GALNAC5 (ENSSBOG00000031638) #29	ST6GALNAC3 (ENSSBOG00000034145) #30	ENSSBOG00000033796	ASB17 (ENSSBOG00000036206) #31	MSH4 (ENSSBOG00000020272) #32	RABGGTB (ENSSBOG00000030418) #33	ACADM (ENSSBOG00000032362) #34	SLC44A5 (ENSSBOG00000025792) #35
Marmoset	MODERN SPECIES	19	TTLL7 (ENSCJAG00000007255)	ENSCJAG00000073777	ENSCJAG00000084484	ENSCJAG00000079597	ENSCJAG00000084592	ENSCJAG00000085077	ADGRL2 (ENSCJAG00000007190) #8	ENSCJAG00000085941	ENSCJAG00000079091	ENSCJAG00000084751	ADGRL4 (ENSCJAG00000007171) #12	PTGFR (ENSCJAG00000007162) #16	ENSCJAG00000023449	GIPC2 (ENSCJAG00000059871) #19	DNAJB4 (ENSCJAG00000045975) #21	FUBP1 (ENSCJAG00000007062) #22	NEXN (ENSCJAG00000006981) #23	USP33 (ENSCJAG00000006932) #25	ZZZ3 (ENSCJAG00000006894) #26	ENSCJAG00000054142	AK5 (ENSCJAG00000006856) #27	ENSCJAG00000084117	PIGK (ENSCJAG00000048297) #28	ST6GALNAC5 (ENSCJAG00000081117) #29	ENSCJAG00000087327	ST6GALNAC3 (ENSCJAG00000006823) #30	ASB17 (ENSCJAG00000006817) #31	MSH4 (ENSCJAG00000006791) #32	ACADM (ENSCJAG00000006692) #34	SLC44A5 (ENSCJAG00000006591) #35	LHX8 (ENSCJAG00000006569) #36
Tarsier	MODERN SPECIES	3197																FUBP1 (ENSTSYG00000000148) #22	NEXN (ENSTSYG00000000145) #23	MIGA1 (ENSTSYG00000002529) #24	ENSTSYG00000030991	USP33 (ENSTSYG00000014281) #25
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Lemuriformes	ANCESTRAL SPECIES		ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Lemuriformes_a	ANCESTRAL SPECIES	39	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00910000147246	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00950000185225 #20	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00910000147361	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Coquerels sifaka	MODERN SPECIES	846	CTBS (ENSPCOG00000021717)	SPATA1 (ENSPCOG00000028221)	ENSPCOG00000019625	ENSPCOG00000022483	DNASE2B (ENSPCOG00000020958)	ENSPCOG00000014070	SAMD13 (ENSPCOG00000028743)	PRKACB (ENSPCOG00000014437)	TTLL7 (ENSPCOG00000017715)	ADGRL2 (ENSPCOG00000022804) #8	ENSPCOG00000024442	ADGRL4 (ENSPCOG00000022457) #12	PTGFR (ENSPCOG00000027733) #16	GIPC2 (ENSPCOG00000023278) #19	DNAJB4 (ENSPCOG00000017453) #21	FUBP1 (ENSPCOG00000024974) #22	NEXN (ENSPCOG00000017864) #23	MIGA1 (ENSPCOG00000028257) #24	USP33 (ENSPCOG00000026094) #25	ZZZ3 (ENSPCOG00000025285) #26	AK5 (ENSPCOG00000020852) #27	PIGK (ENSPCOG00000023304) #28	ST6GALNAC5 (ENSPCOG00000014757) #29	ST6GALNAC3 (ENSPCOG00000027696) #30	ASB17 (ENSPCOG00000013212) #31	MSH4 (ENSPCOG00000028063) #32	ENSPCOG00000019705 #33	ACADM (ENSPCOG00000023154) #34	ENSPCOG00000010188	SLC44A5 (ENSPCOG00000014722) #35	LHX8 (ENSPCOG00000007457) #36
Greater bamboo lemur	MODERN SPECIES	111													GIPC2 (ENSPSMG00000015067) #19	ENSPSMG00000015074 #20	DNAJB4 (ENSPSMG00000015086) #21	FUBP1 (ENSPSMG00000015178) #22	NEXN (ENSPSMG00000015276) #23	MIGA1 (ENSPSMG00000015480) #24	USP33 (ENSPSMG00000015613) #25	ZZZ3 (ENSPSMG00000015673) #26	AK5 (ENSPSMG00000015774) #27	PIGK (ENSPSMG00000015942) #28	ST6GALNAC5 (ENSPSMG00000015972) #29	ENSPSMG00000015976	ST6GALNAC3 (ENSPSMG00000015988) #30	ASB17 (ENSPSMG00000015995) #31	MSH4 (ENSPSMG00000016033) #32	RABGGTB (ENSPSMG00000016076) #33	ACADM (ENSPSMG00000016274) #34	SLC44A5 (ENSPSMG00000016379) #35	LHX8 (ENSPSMG00000016399) #36
Bushbaby	MODERN SPECIES	125	SSX2IP (ENSOGAG00000004650)	CTBS (ENSOGAG00000004649)	SPATA1 (ENSOGAG00000004646)	GNG5 (ENSOGAG00000004645)	RPF1 (ENSOGAG00000004642)	DNASE2B (ENSOGAG00000005849)	ENSOGAG00000028035	SAMD13 (ENSOGAG00000005845)	PRKACB (ENSOGAG00000005838)	TTLL7 (ENSOGAG00000005832)	ADGRL2 (ENSOGAG00000009602) #8	ADGRL4 (ENSOGAG00000006134) #12	PTGFR (ENSOGAG00000007261) #16	GIPC2 (ENSOGAG00000007256) #19	DNAJB4 (ENSOGAG00000014243) #21	FUBP1 (ENSOGAG00000014233) #22	NEXN (ENSOGAG00000014228) #23	MIGA1 (ENSOGAG00000014221) #24	USP33 (ENSOGAG00000014214) #25	ZZZ3 (ENSOGAG00000014210) #26	AK5 (ENSOGAG00000014208) #27	PIGK (ENSOGAG00000015842) #28	ENSOGAG00000033187 #29	ST6GALNAC3 (ENSOGAG00000015290) #30	ASB17 (ENSOGAG00000031415) #31	MSH4 (ENSOGAG00000007669) #32	RABGGTB (ENSOGAG00000007665) #33	ACADM (ENSOGAG00000007657) #34	SLC44A5 (ENSOGAG00000001251) #35	LHX8 (ENSOGAG00000030114) #36	ENSOGAG00000011590
Atlantogenata	ANCESTRAL SPECIES	11	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Xenarthra	ANCESTRAL SPECIES	267											ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30
Sloth	MODERN SPECIES	4857																FUBP1 (ENSCHOG00000008177) #22	NEXN (ENSCHOG00000008161) #23
Armadillo	MODERN SPECIES	4348				ENSDNOG00000031062	OR2B6 (ENSDNOG00000019100)	ENSDNOG00000019101	ENSDNOG00000048655	ENSDNOG00000017120	ENSDNOG00000048911	ENSDNOG00000033646	ENSDNOG00000031927	ENSDNOG00000047438	H2AC14 (ENSDNOG00000032727)	ENSDNOG00000046065	ENSDNOG00000036080	ENSDNOG00000034565 #22
Afrotheria	ANCESTRAL SPECIES	21	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	5288																ENSETEG00000000948 #22	NEXN (ENSETEG00000000944) #23
Tenrec	MODERN SPECIES	8746																ENSETEG00000016532 #22
Afrotheria_a	ANCESTRAL SPECIES	20	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00940000162964 #14	ENSGT00940000163189 #15	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Elephant	MODERN SPECIES	145	ENSLAFG00000007034	RPF1 (ENSLAFG00000007031)	DNASE2B (ENSLAFG00000031438)	ENSLAFG00000026431	ENSLAFG00000031962	PRKACB (ENSLAFG00000006544)	TTLL7 (ENSLAFG00000022500)	ADGRL2 (ENSLAFG00000013215) #8	ENSLAFG00000022545	ADGRL4 (ENSLAFG00000014692) #12	IFI44 (ENSLAFG00000015093) #14	IFI44L (ENSLAFG00000018293) #15	PTGFR (ENSLAFG00000005183) #16	GIPC2 (ENSLAFG00000004720) #19	DNAJB4 (ENSLAFG00000021392) #21	FUBP1 (ENSLAFG00000003273) #22	NEXN (ENSLAFG00000003267) #23	MIGA1 (ENSLAFG00000003262) #24	USP33 (ENSLAFG00000016986) #25	ZZZ3 (ENSLAFG00000011398) #26	AK5 (ENSLAFG00000011392) #27	PIGK (ENSLAFG00000021632) #28	ST6GALNAC5 (ENSLAFG00000001461) #29	ENSLAFG00000003495 #30	ASB17 (ENSLAFG00000015332) #31	MSH4 (ENSLAFG00000015327) #32	RABGGTB (ENSLAFG00000003111) #33	ACADM (ENSLAFG00000003112) #34	SLC44A5 (ENSLAFG00000015047) #35	LHX8 (ENSLAFG00000015040) #36	TYW3 (ENSLAFG00000011373)
Hyrax	MODERN SPECIES	11732																FUBP1 (ENSPCAG00000012617) #22	NEXN (ENSPCAG00000012731) #23
Marsupialia	ANCESTRAL SPECIES	37													ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Marsupialia_b	ANCESTRAL SPECIES	33												ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT01020000234420	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077.a #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Diprotodontia	ANCESTRAL SPECIES	69												ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT01020000234420	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00600000085635	ENSGT00940000159735 #30	ENSGT00390000018077.a #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Diprotodontia_a	ANCESTRAL SPECIES	52												ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT01020000234420	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00600000085635	ENSGT00940000159735 #30	ENSGT00390000018077.a #31	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429.c #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36
Common wonbat	MODERN SPECIES	1040											PTGFR (ENSVURG00010010707) #16	ENSVURG00010010714	GIPC2 (ENSVURG00010010737) #19	ENSVURG00010011064	DNAJB4 (ENSVURG00010011071) #21	FUBP1 (ENSVURG00010011085) #22	NEXN (ENSVURG00010011131) #23	MIGA1 (ENSVURG00010011147) #24	USP33 (ENSVURG00010011166) #25	ZZZ3 (ENSVURG00010011195) #26	AK5 (ENSVURG00010011229) #27	PIGK (ENSVURG00010011289) #28	ST6GALNAC5 (ENSVURG00010011870) #29	ENSVURG00010011900	ENSVURG00010011905 #30	ASB17 (ENSVURG00010011910) #31	ENSVURG00010011913 #32	RABGGTB (ENSVURG00010011926) #33	ENSVURG00010011941 #34	ENSVURG00010011979 #35	LHX8 (ENSVURG00010012906) #36
Wallaby	MODERN SPECIES	6647																ENSMEUG00000007917 #22
Opossum	MODERN SPECIES	317												ENSMODG00000022842	ENSMODG00000022843	ENSMODG00000020801 #19	DNAJB4 (ENSMODG00000020806) #21	FUBP1 (ENSMODG00000020804) #22	NEXN (ENSMODG00000020802) #23	MIGA1 (ENSMODG00000020799) #24
Sauria	ANCESTRAL SPECIES	7	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT01030000235381	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Archelosauria	ANCESTRAL SPECIES	9	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Cryptodira	ANCESTRAL SPECIES	8	ENSGT00940000153229.B.f	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00940000153229.B.f	ENSGT00530000063936.b	ENSGT01030000235381.a	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176.j #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Emydidae	ANCESTRAL SPECIES	22	ENSGT01030000235381.b	ENSGT00940000153229.B.f	ENSGT00530000063936.b	ENSGT01030000235381.a	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176.j.a #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	98	ENSTMTG00000009245	ENSTMTG00000009263	ENSTMTG00000009379	ENSTMTG00000009390	ENSTMTG00000009411	ENSTMTG00000009456	ENSTMTG00000009501	ENSTMTG00000009548 #8	ENSTMTG00000009648 #12	ENSTMTG00000007853	ENSTMTG00000007927	ENSTMTG00000007951	ENSTMTG00000007971 #16	ENSTMTG00000007991 ##19	ENSTMTG00000008032 #21	ENSTMTG00000008042 #22	ENSTMTG00000008075 #23	ENSTMTG00000008136 #24	ENSTMTG00000008167 #25	ENSTMTG00000008210 #26	ENSTMTG00000008255 #27	ENSTMTG00000008356 #28	ENSTMTG00000008390 #29	ENSTMTG00000008411 #30	ENSTMTG00000008432 #32	ENSTMTG00000008566 #33	ENSTMTG00000008584 #34	ENSTMTG00000008623 #35	ENSTMTG00000008743 #36	ENSTMTG00000008795	ENSTMTG00000008811
Three-toed box turtle	MODERN SPECIES	97	ENSTMTG00000012291	ENSTMTG00000012310	ENSTMTG00000012326	ENSTMTG00000012342	ENSTMTG00000012364	ENSTMTG00000012421	ENSTMTG00000012448 #8	ENSTMTG00000012498	ENSTMTG00000012517 #12	ENSTMTG00000012559	ENSTMTG00000012676	ENSTMTG00000012931	ENSTMTG00000013092 #16	ENSTMTG00000013110 ##19	ENSTMTG00000013167 #21	ENSTMTG00000013158 #22	ENSTMTG00000016589 #23	ENSTMTG00000016610 #23	ENSTMTG00000016625 #24	ENSTMTG00000016685 #25	ENSTMTG00000016762 #26	ENSTMTG00000016796 #27	ENSTMTG00000016956 #28	ENSTMTG00000016990 #29	ENSTMTG00000017007 #30	ENSTMTG00000017021 #32	ENSTMTG00000017146 #33	ENSTMTG00000017215 #34	ENSTMTG00000017237 #35	ENSTMTG00000017323 #36	TYW3 (ENSTMTG00000017365)
Chinese turtle	MODERN SPECIES	1559														GIPC2 (ENSPSIG00000013602) #19	DNAJB4 (ENSPSIG00000013520) #21	FUBP1 (ENSPSIG00000012965) #22	NEXN (ENSPSIG00000012619) #23	MIGA1 (ENSPSIG00000011957) #24	USP33 (ENSPSIG00000011185) #25	ZZZ3 (ENSPSIG00000011052) #26	ENSPSIG00000011026	AK5 (ENSPSIG00000010838) #27	ST6GALNAC5 (ENSPSIG00000010832) #29
Archosauria	ANCESTRAL SPECIES	11	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C
Aves	ANCESTRAL SPECIES	7	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015
Neognathae	ANCESTRAL SPECIES	8	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015
Galloanserae	ANCESTRAL SPECIES	8	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT00390000003015	ENSGT00510000048988	ENSGT00940000157693
Anatidae	ANCESTRAL SPECIES	5	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT00390000003015	ENSGT00510000048988	ENSGT00940000157693
Pink-footed goose	MODERN SPECIES	1	ENSABRG00000018492	RPF1 (ENSABRG00000018488)	DNASE2B (ENSABRG00000018484)	ENSABRG00000018473	SAMD13 (ENSABRG00000018468)	ENSABRG00000018455	TTLL7 (ENSABRG00000018431)	ADGRL2 (ENSABRG00000018355) #8	ENSABRG00000018347	ADGRL4 (ENSABRG00000018306) #12	ENSABRG00000018257	PTGFR (ENSABRG00000018247) #16	ENSABRG00000018241 #19	ENSABRG00000018235	DNAJB4 (ENSABRG00000018232) #21	FUBP1 (ENSABRG00000018222) #22	NEXN (ENSABRG00000018218) #23	MIGA1 (ENSABRG00000018211) #24	USP33 (ENSABRG00000018203) #25	ZZZ3 (ENSABRG00000018199) #26	AK5 (ENSABRG00000018194) #27	PIGK (ENSABRG00000018189) #28	ST6GALNAC5 (ENSABRG00000018187) #29	ST6GALNAC3 (ENSABRG00000018180) #30	PIF1 (ENSABRG00000018174)	ENSABRG00000018171	EBNA1BP2 (ENSABRG00000018164)	CFAP57 (ENSABRG00000018154)	TMEM125 (ENSABRG00000018150)	C1orf210 (ENSABRG00000018145)	TIE1 (ENSABRG00000018130)
Duck	MODERN SPECIES	26	ENSAPLG00000016344	DNASE2B (ENSAPLG00000026479)	SAMD13 (ENSAPLG00000016342)	ENSAPLG00000029314	ENSAPLG00000016236	TTLL7 (ENSAPLG00000016057)	ADGRL2 (ENSAPLG00000004072) #8	ENSAPLG00000024586	ENSAPLG00000025178	ADGRL4 (ENSAPLG00000003585) #12	ENSAPLG00000003957	PTGFR (ENSAPLG00000005684) #16	GIPC2 (ENSAPLG00000005690) #19	ENSAPLG00000030011	DNAJB4 (ENSAPLG00000005935) #21	FUBP1 (ENSAPLG00000005965) #22	NEXN (ENSAPLG00000006591) #23	MIGA1 (ENSAPLG00000006900) #24	USP33 (ENSAPLG00000007027) #25	ZZZ3 (ENSAPLG00000007892) #26	AK5 (ENSAPLG00000008100) #27	PIGK (ENSAPLG00000008332) #28	ST6GALNAC5 (ENSAPLG00000008770) #29	ST6GALNAC3 (ENSAPLG00000008973) #30	PIF1 (ENSAPLG00000009068)	ENSAPLG00000009104	EBNA1BP2 (ENSAPLG00000009109)	CFAP57 (ENSAPLG00000009398)	MED8 (ENSAPLG00000010948)	ENSAPLG00000024178	ENSAPLG00000018480
Phasianidae	ANCESTRAL SPECIES	7	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT01030000235287	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT00390000003015	ENSGT00510000048988	ENSGT00940000157693
Japanese quail	MODERN SPECIES	26	RPF1 (ENSCJPG00005008339)	ENSCJPG00005008342	DNASE2B (ENSCJPG00005008343)	ENSCJPG00005008346	SAMD13 (ENSCJPG00005008347)	ENSCJPG00005008353	TTLL7 (ENSCJPG00005008366)	ADGRL2 (ENSCJPG00005008376) #8	ENSCJPG00005008381	ENSCJPG00005008389	ADGRL4 (ENSCJPG00005008404) #12	ENSCJPG00005008413	PTGFR (ENSCJPG00005008414) #16	ENSCJPG00005008416 #19	DNAJB4 (ENSCJPG00005008417) #21	FUBP1 (ENSCJPG00005008428) #22	NEXN (ENSCJPG00005008430) #23	MIGA1 (ENSCJPG00005008431) #24	USP33 (ENSCJPG00005008432) #25	ZZZ3 (ENSCJPG00005009039) #26	AK5 (ENSCJPG00005009040) #27	PIGK (ENSCJPG00005009041) #28	ST6GALNAC5 (ENSCJPG00005009042) #29	ST6GALNAC3 (ENSCJPG00005009043) #30	PIF1 (ENSCJPG00005009044)	ENSCJPG00005009045	EBNA1BP2 (ENSCJPG00005009046)	CFAP57 (ENSCJPG00005009047)	TMEM125 (ENSCJPG00005009048)	ENSCJPG00005009049	TIE1 (ENSCJPG00005009050)
Phasianidae_b	ANCESTRAL SPECIES	7	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT00390000003015	ENSGT00510000048988	ENSGT00940000157693
Chicken	MODERN SPECIES	37	RPF1 (ENSGALG00010020957)	ENSGALG00010020715	DNASE2B (ENSGALG00010024505)	THAP10 (ENSGALG00010020742)	ENSGALG00010020749	PRKACB (ENSGALG00010021072)	TTLL7 (ENSGALG00010021080)	ADGRL2 (ENSGALG00010021575) #8	ENSGALG00010024215	ADGRL4 (ENSGALG00010021613) #12	VTG1 (ENSGALG00010021630)	PTGFR (ENSGALG00010020693) #16	GIPC2 (ENSGALG00010022172) #19	ENSGALG00010022175	DNAJB4 (ENSGALG00010022186) #21	FUBP1 (ENSGALG00010022228) #22	NEXN (ENSGALG00010022290) #23	MIGA1 (ENSGALG00010022325) #24	USP33 (ENSGALG00010022345) #25	ZZZ3 (ENSGALG00010022359) #26	AK5 (ENSGALG00010022373) #27	PIGK (ENSGALG00010022435) #28	ST6GALNAC5 (ENSGALG00010022471) #29	ST6GALNAC3 (ENSGALG00010024554) #30	PIF1 (ENSGALG00010022480)	FAM183A (ENSGALG00010022486)	EBNA1BP2 (ENSGALG00010022506)	CFAP57 (ENSGALG00010022534)	TMEM125 (ENSGALG00010022581)	C1orf210 (ENSGALG00010022645)	TIE1 (ENSGALG00010022659)
Turkey	MODERN SPECIES	1	ENSMGAG00000009718	TIE1 (ENSMGAG00000009720)	EBNA1BP2 (ENSMGAG00000009689)	ENSMGAG00000009667	ENSMGAG00000009653 #30	ENSMGAG00000009631 #29	ENSMGAG00000009634 #28	ENSMGAG00000009597 #27	ENSMGAG00000009582 #26	ENSMGAG00000019032 #27	ENSMGAG00000009520 #25	ENSMGAG00000018767 #24	ENSMGAG00000009506 #24	ENSMGAG00000009489 #23	ENSMGAG00000020233 #23	ENSMGAG00000009424 #22	ENSMGAG00000009417 #21	ENSMGAG00000020030	ENSMGAG00000009407 #19	ENSMGAG00000009401 #16	ENSMGAG00000009357	ENSMGAG00000009334 #12
Neognathae_b	ANCESTRAL SPECIES	10	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015
Passeriformes	ANCESTRAL SPECIES	8	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015	ENSGT00510000048988
Great tit	MODERN SPECIES	28	ENSPMJG00000019445	RPF1 (ENSPMJG00000019446)	DNASE2B (ENSPMJG00000019447)	ENSPMJG00000019448	SAMD13 (ENSPMJG00000019449)	ENSPMJG00000019450	ENSPMJG00000019451	TTLL7 (ENSPMJG00000019452)	ADGRL2 (ENSPMJG00000019455) #8	ADGRL4 (ENSPMJG00000019463) #12	ENSPMJG00000019464	PTGFR (ENSPMJG00000019465) #16	GIPC2 (ENSPMJG00000019466) #19	ENSPMJG00000019467	DNAJB4 (ENSPMJG00000019468) #21	FUBP1 (ENSPMJG00000019469) #22	NEXN (ENSPMJG00000019470) #23	ENSPMJG00000019471 #24	ENSPMJG00000019472 #24	USP33 (ENSPMJG00000019473) #25	ZZZ3 (ENSPMJG00000019474) #26	AK5 (ENSPMJG00000019475) #27	PIGK (ENSPMJG00000019476) #28	ST6GALNAC5 (ENSPMJG00000019477) #29	ST6GALNAC3 (ENSPMJG00000019478) #30	PIF1 (ENSPMJG00000019479)	ENSPMJG00000019480	EBNA1BP2 (ENSPMJG00000019481)	CFAP57 (ENSPMJG00000019482)	TMEM125 (ENSPMJG00000019483)	ENSPMJG00000019484
Passeriformes_d	ANCESTRAL SPECIES	9	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT01030000235287	ENSGT00940000156348.C #8	ENSGT00960000189609	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015	ENSGT00510000048988
Passeriformes_g	ANCESTRAL SPECIES	10	ENSGT00530000064273.a.b.c	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015	ENSGT00510000048988
Passeroidea	ANCESTRAL SPECIES	9	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015	ENSGT00940000161095
Common canary	MODERN SPECIES	9	CTBS (ENSSCAG00000014189)	SPATA1 (ENSSCAG00000014197)	ENSSCAG00000014208	RPF1 (ENSSCAG00000014213)	ENSSCAG00000014221	DNASE2B (ENSSCAG00000014229)	SAMD13 (ENSSCAG00000014234)	ENSSCAG00000014239	ENSSCAG00000014250	TTLL7 (ENSSCAG00000014266)	ADGRL2 (ENSSCAG00000014298) #8	ADGRL4 (ENSSCAG00000014322) #12	ENSSCAG00000014340	PTGFR (ENSSCAG00000014364) #16	DNAJB4 (ENSSCAG00000014373) #21	FUBP1 (ENSSCAG00000014379) #22	NEXN (ENSSCAG00000014397) #23	MIGA1 (ENSSCAG00000014424) #24	USP33 (ENSSCAG00000014458) #25	ZZZ3 (ENSSCAG00000014480) #26	AK5 (ENSSCAG00000014490) #27	PIGK (ENSSCAG00000014508) #28	ST6GALNAC5 (ENSSCAG00000014515) #29	ST6GALNAC3 (ENSSCAG00000014538) #30	ENSSCAG00000014552	EBNA1BP2 (ENSSCAG00000014556)	CFAP57 (ENSSCAG00000014563)	ENSSCAG00000014570	TMEM125 (ENSSCAG00000014575)	ENSSCAG00000014578	TIE1 (ENSSCAG00000000036)
Zebra finch	MODERN SPECIES	30	CTBS (ENSTGUG00000006581)	SPATA1 (ENSTGUG00000028467)	GNG5 (ENSTGUG00000021033)	RPF1 (ENSTGUG00000006591)	ENSTGUG00000006616	ENSTGUG00000025734	DNASE2B (ENSTGUG00000006605)	ENSTGUG00000006643	TTLL7 (ENSTGUG00000006665)	ADGRL2 (ENSTGUG00000006679) #8	ADGRL4 (ENSTGUG00000006751) #12	ENSTGUG00000006778	PTGFR (ENSTGUG00000006816) #16	GIPC2 (ENSTGUG00000023052) #19	DNAJB4 (ENSTGUG00000006835) #21	FUBP1 (ENSTGUG00000006841) #22	NEXN (ENSTGUG00000006920) #23	MIGA1 (ENSTGUG00000006940) #24	USP33 (ENSTGUG00000006953) #25	ZZZ3 (ENSTGUG00000007000) #26	AK5 (ENSTGUG00000007008) #27	PIGK (ENSTGUG00000007025) #28	ST6GALNAC5 (ENSTGUG00000007050) #29	ENSTGUG00000021371	ST6GALNAC3 (ENSTGUG00000023113) #30	PIF1 (ENSTGUG00000007063)	ENSTGUG00000007070	EBNA1BP2 (ENSTGUG00000007072)	CFAP57 (ENSTGUG00000007089)	TMEM125 (ENSTGUG00000023242)	ENSTGUG00000007099
Medium ground finch	MODERN SPECIES	50											ADGRL4 (ENSGFOG00000013989) #12	ENSGFOG00000013996	PTGFR (ENSGFOG00000014000) #16	GIPC2 (ENSGFOG00000014002) #19	DNAJB4 (ENSGFOG00000014005) #21	FUBP1 (ENSGFOG00000014007) #22	NEXN (ENSGFOG00000014019) #23	MIGA1 (ENSGFOG00000014034) #24	USP33 (ENSGFOG00000014045) #25	ZZZ3 (ENSGFOG00000006958) #26	AK5 (ENSGFOG00000006972) #27	PIGK (ENSGFOG00000007001) #28	ST6GALNAC5 (ENSGFOG00000007072) #29	ST6GALNAC3 (ENSGFOG00000007079) #30	PIF1 (ENSGFOG00000007083)	CFAP144 (ENSGFOG00000007089)	EBNA1BP2 (ENSGFOG00000007091)	CFAP57 (ENSGFOG00000007094)	TMEM125 (ENSGFOG00000007103)	ENSGFOG00000007107	TIE1 (ENSGFOG00000007112)
Flycatcher	MODERN SPECIES	27	SPATA1 (ENSFALG00000006040)	ENSFALG00000025344	RPF1 (ENSFALG00000026271)	ENSFALG00000006014	ENSFALG00000028997	DNASE2B (ENSFALG00000028878)	ENSFALG00000026962	TTLL7 (ENSFALG00000005994)	ENSFALG00000024886	ADGRL2 (ENSFALG00000005968) #8	ENSFALG00000029030	ADGRL4 (ENSFALG00000005951) #12	ENSFALG00000005842	PTGFR (ENSFALG00000024097) #16	DNAJB4 (ENSFALG00000028100) #21	FUBP1 (ENSFALG00000005768) #22	NEXN (ENSFALG00000005748) #23	MIGA1 (ENSFALG00000005734) #24	USP33 (ENSFALG00000005727) #25	ZZZ3 (ENSFALG00000005715) #26	AK5 (ENSFALG00000005705) #27	PIGK (ENSFALG00000028370) #28	ST6GALNAC5 (ENSFALG00000023378) #29	ST6GALNAC3 (ENSFALG00000005674) #30	ENSFALG00000005668	ENSFALG00000023864	EBNA1BP2 (ENSFALG00000005658)	CFAP57 (ENSFALG00000005650)	TMEM125 (ENSFALG00000014128)	ENSFALG00000005641	TIE1 (ENSFALG00000005633)
Neognathae_c	ANCESTRAL SPECIES	7	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01040000241459	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C.f #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00960000191290	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00530000063561	ENSGT00390000006224	ENSGT00390000014984	ENSGT00620000088018	ENSGT01030000235036	ENSGT00390000003015
Kakapo	MODERN SPECIES	25	CTBS (ENSSHBG00005011197)	SPATA1 (ENSSHBG00005011245)	RPF1 (ENSSHBG00005011295)	DNASE2B (ENSSHBG00005011317)	ENSSHBG00005011396	SAMD13 (ENSSHBG00005011750)	ENSSHBG00005011770	TTLL7 (ENSSHBG00005011997)	ADGRL2 (ENSSHBG00005014012) #8	ADGRL4 (ENSSHBG00005014044) #12	ENSSHBG00005014051	ENSSHBG00005014080	PTGFR (ENSSHBG00005014158) #16	GIPC2 (ENSSHBG00005014165) #19	DNAJB4 (ENSSHBG00005014177) #21	FUBP1 (ENSSHBG00005014194) #22	NEXN (ENSSHBG00005014263) #23	ENSSHBG00005014512 #24	ENSSHBG00005014526 #24	USP33 (ENSSHBG00005014547) #25	ZZZ3 (ENSSHBG00005014595) #26	AK5 (ENSSHBG00005014615) #27	PIGK (ENSSHBG00005014629) #28	ST6GALNAC5 (ENSSHBG00005014644) #29	ST6GALNAC3 (ENSSHBG00005014688) #30	PIF1 (ENSSHBG00005014717)	ENSSHBG00005014756	ENSSHBG00005014762	EBNA1BP2 (ENSSHBG00005014768)	CFAP57 (ENSSHBG00005014776)	TMEM125 (ENSSHBG00005014788)
Golden eagle	MODERN SPECIES	3	SPATA1 (ENSACCG00020003637)	ENSACCG00020003655	RPF1 (ENSACCG00020003670)	DNASE2B (ENSACCG00020003684)	ENSACCG00020003719	SAMD13 (ENSACCG00020003750)	ENSACCG00020003763	ENSACCG00020003796	TTLL7 (ENSACCG00020003837)	ADGRL2 (ENSACCG00020003921) #8	ADGRL4 (ENSACCG00020003993) #12	ENSACCG00020004023	PTGFR (ENSACCG00020004040) #16	GIPC2 (ENSACCG00020004046) #19	DNAJB4 (ENSACCG00020004058) #21	FUBP1 (ENSACCG00020004073) #22	NEXN (ENSACCG00020004141) #23	MIGA1 (ENSACCG00020004183) #24	USP33 (ENSACCG00020004211) #25	ZZZ3 (ENSACCG00020004242) #26	ENSACCG00020004251	AK5 (ENSACCG00020004258) #27	PIGK (ENSACCG00020004281) #28	ST6GALNAC5 (ENSACCG00020004295) #29	ST6GALNAC3 (ENSACCG00020004305) #30	PIF1 (ENSACCG00020004340)	CFAP144 (ENSACCG00020004355)	EBNA1BP2 (ENSACCG00020004368)	CFAP57 (ENSACCG00020004399)	ENSACCG00020007145	TMEM125 (ENSACCG00020007153)
African ostrich	MODERN SPECIES	472												ENSSCUG00000008354	PTGFR (ENSSCUG00000008351) #16	ENSSCUG00000008350 #19	DNAJB4 (ENSSCUG00000008349) #21	FUBP1 (ENSSCUG00000008342) #22	NEXN (ENSSCUG00000008341) #23	MIGA1 (ENSSCUG00000008340) #24	USP33 (ENSSCUG00000008336) #25	ZZZ3 (ENSSCUG00000008330) #26	AK5 (ENSSCUG00000008327) #27	PIGK (ENSSCUG00000008324) #28	ST6GALNAC5 (ENSSCUG00000008323) #29	ST6GALNAC3 (ENSSCUG00000008320) #30	PIF1 (ENSSCUG00000008319)	CFAP144 (ENSSCUG00000008318)	EBNA1BP2 (ENSSCUG00000008316)	CFAP57 (ENSSCUG00000008315)	TMEM125 (ENSSCUG00000008314)	ENSSCUG00000008312	TIE1 (ENSSCUG00000008305)
Lepidosauria	ANCESTRAL SPECIES	11	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT01030000235381	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897 #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT01030000235381	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897.g #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Laterata	ANCESTRAL SPECIES	3	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT01030000235381	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT00940000163581	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00960000189519	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897.g #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Common wall lizard	MODERN SPECIES	14	ENSPMRG00000008328	ENSPMRG00000008345	TTLL7 (ENSPMRG00000008385)	ENSPMRG00000008439	ADGRL2 (ENSPMRG00000008455) #8	ENSPMRG00000008549	ENSPMRG00000008553	ENSPMRG00000008560	ENSPMRG00000008563	ADGRL4 (ENSPMRG00000009916) #12	ENSPMRG00000009940	ENSPMRG00000009971	PTGFR (ENSPMRG00000010012) #16	GIPC2 (ENSPMRG00000010015) #19	DNAJB4 (ENSPMRG00000010025) #21	FUBP1 (ENSPMRG00000010036) #22	NEXN (ENSPMRG00000010075) #23	MIGA1 (ENSPMRG00000010093) #24	USP33 (ENSPMRG00000010102) #25	ZZZ3 (ENSPMRG00000010113) #26	AK5 (ENSPMRG00000010119) #27	PIGK (ENSPMRG00000010127) #28	ST6GALNAC5 (ENSPMRG00000010133) #29	ST6GALNAC3 (ENSPMRG00000010135) #30	ENSPMRG00000010140 #32	ENSPMRG00000010145 #32	RABGGTB (ENSPMRG00000010149) #33	ACADM (ENSPMRG00000010163) #34	ENSPMRG00000010171	SLC44A5 (ENSPMRG00000010178) #35	LHX8 (ENSPMRG00000010186) #36
Argentine black and white tegu	MODERN SPECIES	31	DNASE2B (ENSSMRG00000020396)	ENSSMRG00000020215	ENSSMRG00000020214	SAMD13 (ENSSMRG00000020213)	ENSSMRG00000020212	TTLL7 (ENSSMRG00000020211)	ADGRL2 (ENSSMRG00000020209) #8	ENSSMRG00000020205	ENSSMRG00000020203	ADGRL4 (ENSSMRG00000020202) #12	ENSSMRG00000020201	PTGFR (ENSSMRG00000020200) #16	GIPC2 (ENSSMRG00000020199) #19	ENSSMRG00000020198	DNAJB4 (ENSSMRG00000020197) #21	FUBP1 (ENSSMRG00000020196) #22	NEXN (ENSSMRG00000020195) #23	MIGA1 (ENSSMRG00000020194) #24	USP33 (ENSSMRG00000020193) #25	ZZZ3 (ENSSMRG00000020192) #26	ENSSMRG00000020191 #27	ENSSMRG00000020190 #27	PIGK (ENSSMRG00000020189) #28	ST6GALNAC5 (ENSSMRG00000020188) #29	ENSSMRG00000020184	ST6GALNAC3 (ENSSMRG00000020182) #30	MSH4 (ENSSMRG00000020179) #32	RABGGTB (ENSSMRG00000020172) #33	ACADM (ENSSMRG00000020171) #34	SLC44A5 (ENSSMRG00000020166) #35	LHX8 (ENSSMRG00000020162) #36
Toxicofera	ANCESTRAL SPECIES	1	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897.g #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Elapidae	ANCESTRAL SPECIES	1	ENSGT00390000003298.a	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897.g #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882.q
Indian cobra	MODERN SPECIES	2	ENSNNAG00000002026	ENSNNAG00000002018	ENSNNAG00000002012	RPF1 (ENSNNAG00000002000)	ENSNNAG00000001944	ENSNNAG00000001919	ENSNNAG00000001912	SAMD13 (ENSNNAG00000001902)	ENSNNAG00000001881	TTLL7 (ENSNNAG00000001857)	ENSNNAG00000001845	ADGRL2 (ENSNNAG00000001776) #8	ADGRL4 (ENSNNAG00000001707) #12	PTGFR (ENSNNAG00000001677) #16	DNAJB4 (ENSNNAG00000001660) #21	FUBP1 (ENSNNAG00000001553) #22	NEXN (ENSNNAG00000001464) #23	ENSNNAG00000001365 #24	USP33 (ENSNNAG00000001269) #25	ZZZ3 (ENSNNAG00000001239) #26	AK5 (ENSNNAG00000001212) #27	PIGK (ENSNNAG00000001169) #28	ST6GALNAC5 (ENSNNAG00000001141) #29	ST6GALNAC3 (ENSNNAG00000001135) #30	MSH4 (ENSNNAG00000001084) #32	RABGGTB (ENSNNAG00000001037) #33	ACADM (ENSNNAG00000001011) #34	SLC44A5 (ENSNNAG00000000960) #35	LHX8 (ENSNNAG00000000937) #36	TYW3 (ENSNNAG00000000928)	CRYZ (ENSNNAG00000000906)
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00390000003298.a	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897.g #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882.q
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000163111.a.b.b	ENSGT00940000159078	ENSGT00940000166568	ENSGT00940000154721.b	ENSGT00940000156348.C #8	ENSGT00940000158252 #12	ENSGT00530000064273.a.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00730000111176.g #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00550000074897.g #32	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882.q
Eastern brown snake	MODERN SPECIES	13	ENSPTXG00000006365	RPF1 (ENSPTXG00000006364)	ENSPTXG00000006359	ENSPTXG00000006358	SAMD13 (ENSPTXG00000006357)	ENSPTXG00000006356	TTLL7 (ENSPTXG00000006355)	ENSPTXG00000006354	ENSPTXG00000006353	ENSPTXG00000006352	ADGRL2 (ENSPTXG00000006351) #8	ADGRL4 (ENSPTXG00000006350) #12	PTGFR (ENSPTXG00000006349) #16	GIPC2 (ENSPTXG00000006348) #19	DNAJB4 (ENSPTXG00000006347) #21	FUBP1 (ENSPTXG00000006346) #22	NEXN (ENSPTXG00000006345) #23	MIGA1 (ENSPTXG00000006344) #24	USP33 (ENSPTXG00000001667) #25	ZZZ3 (ENSPTXG00000001578) #26	AK5 (ENSPTXG00000001570) #27	PIGK (ENSPTXG00000001564) #28	ST6GALNAC5 (ENSPTXG00000001558) #29	ST6GALNAC3 (ENSPTXG00000001556) #30	MSH4 (ENSPTXG00000001552) #32	RABGGTB (ENSPTXG00000001543) #33	ACADM (ENSPTXG00000001540) #34	SLC44A5 (ENSPTXG00000000227) #35	LHX8 (ENSPTXG00000000088) #36	TYW3 (ENSPTXG00000006516)	CRYZ (ENSPTXG00000006515)
Mainland tiger snake	MODERN SPECIES	114															DNAJB4 (ENSNSUG00000006687) #21	FUBP1 (ENSNSUG00000006688) #22	ENSNSUG00000006960 #23	MIGA1 (ENSNSUG00000006961) #24	USP33 (ENSNSUG00000007039) #25	ZZZ3 (ENSNSUG00000007586) #26	AK5 (ENSNSUG00000007587) #27	PIGK (ENSNSUG00000007597) #28	ST6GALNAC5 (ENSNSUG00000007598) #29	ST6GALNAC3 (ENSNSUG00000007599) #30	MSH4 (ENSNSUG00000007600) #32	ENSNSUG00000007604 #33	ENSNSUG00000007606 #33	ACADM (ENSNSUG00000007609) #34	SLC44A5 (ENSNSUG00000007610) #35	LHX8 (ENSNSUG00000008114) #36	TYW3 (ENSNSUG00000008115)
Blue-lipped sea krait	MODERN SPECIES	1022															DNAJB4 (ENSLLTG00000002857) #21	FUBP1 (ENSLLTG00000002848) #22
Lizard	MODERN SPECIES	808	TTLL7 (ENSACAG00000005860)	ENSACAG00000036494	ENSACAG00000042217	ENSACAG00000043312	ENSACAG00000038563	ADGRL2 (ENSACAG00000006572) #8	ENSACAG00000040715	ENSACAG00000042877	ENSACAG00000006566	ADGRL4 (ENSACAG00000006559) #12	ENSACAG00000035508	ENSACAG00000006542	PTGFR (ENSACAG00000006527) #16	GIPC2 (ENSACAG00000006486) #19	DNAJB4 (ENSACAG00000006469) #21	FUBP1 (ENSACAG00000006310) #22	NEXN (ENSACAG00000006274) #23	MIGA1 (ENSACAG00000006252) #24	USP33 (ENSACAG00000006035) #25	ZZZ3 (ENSACAG00000006005) #26	AK5 (ENSACAG00000005914) #27	ENSACAG00000042122	ENSACAG00000040085	ST6GALNAC5 (ENSACAG00000005827) #29	ENSACAG00000036878	ST6GALNAC3 (ENSACAG00000005819) #30	ENSACAG00000043080	ENSACAG00000045075	MSH4 (ENSACAG00000010892) #32	ENSACAG00000011052 #33	ACADM (ENSACAG00000011142) #34
tuatara	MODERN SPECIES	1515														ENSSPUG00000008481 #19	DNAJB4 (ENSSPUG00000008476) #21	FUBP1 (ENSSPUG00000008389) #22	NEXN (ENSSPUG00000008366) #23	MIGA1 (ENSSPUG00000008347) #24	USP33 (ENSSPUG00000008122) #25	ZZZ3 (ENSSPUG00000008053) #26	ENSSPUG00000008041 #27	ENSSPUG00000008025 #27	PIGK (ENSSPUG00000008007) #28	ST6GALNAC5 (ENSSPUG00000007999) #29	ST6GALNAC3 (ENSSPUG00000007993) #30	MSH4 (ENSSPUG00000007971) #32	RABGGTB (ENSSPUG00000007954) #33	ACADM (ENSSPUG00000007941) #34	SLC44A5 (ENSSPUG00000007915) #35	LHX8 (ENSSPUG00000007888) #36	TYW3 (ENSSPUG00000007880)
Actinopterygii	ANCESTRAL SPECIES	23	ENSGT00940000163316	ENSGT00940000155505.a	ENSGT00390000008086	ENSGT00940000154587.a.a	ENSGT01050000244898.a.a.b	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00390000009595.a	ENSGT00940000154290.a	ENSGT00940000154296	ENSGT00530000063273.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000170376
Neopterygii	ANCESTRAL SPECIES	9	ENSGT00940000155505.a	ENSGT00390000008086	ENSGT00940000154587.a.a	ENSGT01050000244898.a.a.b	ENSGT01050000244838.H.d.d	ENSGT01050000244838.H.d.c	ENSGT00950000183104.A.a.a	ENSGT00390000009595.a	ENSGT00940000154290.a	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634 #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000156600 #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Osteoglossocephalai	ANCESTRAL SPECIES	16	ENSGT01050000244898.a.a.b	ENSGT01050000244838.H.d.d	ENSGT00390000008086.a	ENSGT01030000235901	ENSGT01050000244838.H.d.c	ENSGT00950000183104.A.a.a	ENSGT00390000009595.a	ENSGT00940000154290.a	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000157634.c #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00990000210457	ENSGT00940000156600.e #35	ENSGT00940000156200.A #36
Clupeocephala	ANCESTRAL SPECIES	107					ENSGT00390000008086.a	ENSGT00940000168638	ENSGT01050000244838.H.d.c	ENSGT00950000183104.A.a.a	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00940000159923	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Otomorpha	ANCESTRAL SPECIES	402											ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000003478
Otophysi	ANCESTRAL SPECIES	129	ENSGT00940000156113	ENSGT00940000164654	ENSGT01100000264057	ENSGT00390000015010	ENSGT00940000154552	ENSGT00940000153783.b.b.d.q	ENSGT00940000159676.b	ENSGT00940000153421.a.a.a.a.a	ENSGT00950000183039.B.b.d	ENSGT00950000183039.B.a	ENSGT00940000167389	ENSGT00940000158024.B	ENSGT00950000183097.a.b	ENSGT00940000165699.A.a.a	ENSGT00940000165699.A.a.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000003478	ENSGT00940000157207.b	ENSGT00940000156826 #21	ENSGT00940000177713	ENSGT00390000003420.a.b #19	ENSGT00530000063273.a	ENSGT00390000016906.a	ENSGT00390000011127.d
Characiphysae	ANCESTRAL SPECIES	35	ENSGT00390000011127.d	ENSGT00390000016906.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00390000003478	ENSGT00940000159735 #30	ENSGT00940000157634.d #29	ENSGT00940000156273 #28	ENSGT00940000155917 #27	ENSGT00390000005307 #26	ENSGT00940000157311 #25	ENSGT00390000008565.b #24	ENSGT00940000160043 #22	ENSGT00940000165699.A.a.b	ENSGT00940000165699.A.a.a	ENSGT00950000183097.a.b	ENSGT00940000158024.B	ENSGT00940000167389	ENSGT00950000183039.B.a	ENSGT00950000183039.B.b.d	ENSGT00940000153421.a.a.a.a.a	ENSGT00940000159676.b	ENSGT00940000153783.b.b.d.q	ENSGT00940000154552	ENSGT00390000015010	ENSGT00940000164654	ENSGT00940000156113	ENSGT00390000005651.n
Characiphysae_b	ANCESTRAL SPECIES	33	ENSGT00940000153655.A.b	ENSGT00390000011127.d	ENSGT00390000016906.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00390000003478	ENSGT00940000159735 #30	ENSGT00940000157634.d #29	ENSGT00940000156273 #28	ENSGT00940000155917 #27	ENSGT00390000005307 #26	ENSGT00940000157311 #25	ENSGT00390000008565.b #24	ENSGT00940000160043 #22	ENSGT00940000165699.A.a.b	ENSGT00940000165699.A.a.a	ENSGT00950000183097.a.b	ENSGT00940000158024.B	ENSGT00940000167389	ENSGT00950000183039.B.a	ENSGT00950000183039.B.b.d	ENSGT00940000153421.a.a.a.a.a	ENSGT00940000159676.b	ENSGT00940000153783.b.b.d.q	ENSGT00940000154552	ENSGT00390000015010	ENSGT00940000164654	ENSGT00940000156113	ENSGT00390000005651.n
Characoidei	ANCESTRAL SPECIES	20	ENSGT00940000153655.A.b	ENSGT00390000011127.d	ENSGT00390000016906.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00390000003478	ENSGT00940000159735 #30	ENSGT00940000157634.d #29	ENSGT00940000156273 #28	ENSGT00940000155917 #27	ENSGT00390000005307 #26	ENSGT00940000157311 #25	ENSGT00390000008565.b #24	ENSGT00940000160043 #22	ENSGT00940000165699.A.a.b	ENSGT00940000165699.A.a.a	ENSGT00950000183097.a.b	ENSGT00940000158024.B	ENSGT00940000167389	ENSGT00950000183039.B.a	ENSGT00950000183039.B.b.d	ENSGT00940000153421.a.a.a.a.a	ENSGT00940000159676.b	ENSGT00940000153783.b.b.d.q	ENSGT00940000154552	ENSGT00390000015010	ENSGT00940000164654	ENSGT00940000156113	ENSGT00390000005651.n
Red-bellied piranha	MODERN SPECIES	236												zzz3 (ENSPNAG00000015944) #26	usp33 (ENSPNAG00000016067) #25	miga1 (ENSPNAG00000016081) #24	PLSCR1 (ENSPNAG00000016104)	fubp1 (ENSPNAG00000016207) #22	ENSPNAG00000016235	ENSPNAG00000016274	si:ch211-71m22.1 (ENSPNAG00000016326)	dipk2aa (ENSPNAG00000016349)	chst2a (ENSPNAG00000016356)	pls1 (ENSPNAG00000016450)	PCOLCE2 (ENSPNAG00000016512)	ephb3a (ENSPNAG00000016608)	ENSPNAG00000016689	KCNMB3 (ENSPNAG00000016702)	kcnmb2 (ENSPNAG00000016723)	tbl1xr1b (ENSPNAG00000003435)	b3gnt5b (ENSPNAG00000016741)	eif4a2 (ENSPNAG00000003445)	dcun1d1 (ENSPNAG00000016833)
Mexicana tetra	MODERN SPECIES	7	zgc:153615 (ENSAMXG00000019038)	ENSAMXG00000040882	txndc12 (ENSAMXG00000042973)	gipc2 (ENSAMXG00000019049) #19	dnajb4 (ENSAMXG00000041323) #21	slc25a24l (ENSAMXG00000019053)	cope (ENSAMXG00000019056)	st6galnac3 (ENSAMXG00000029992) #30	ST6GALNAC5 (ENSAMXG00000041132) #29	pigk (ENSAMXG00000031262) #28	ak5 (ENSAMXG00000019063) #27	zzz3 (ENSAMXG00000032513) #26	usp33 (ENSAMXG00000019073) #25	miga1 (ENSAMXG00000019082) #24	ENSAMXG00000032797	fubp1 (ENSAMXG00000005525) #22	ENSAMXG00000019084	si:ch211-71m22.1 (ENSAMXG00000019087)	dipk2aa (ENSAMXG00000040527)	chst2a (ENSAMXG00000026117)	pls1 (ENSAMXG00000019095)	ENSAMXG00000019101	ephb3a (ENSAMXG00000019102)	ENSAMXG00000019105	ENSAMXG00000019804	ENSAMXG00000019115	kcnmb2 (ENSAMXG00000042970)	tbl1xr1b (ENSAMXG00000031857)	b3gnt5b (ENSAMXG00000026118)	eif4a2 (ENSAMXG00000019126)	dcun1d1 (ENSAMXG00000037139)
Channel catfish	MODERN SPECIES	26	erich6 (ENSIPUG00000010619)	zgc:153615 (ENSIPUG00000010600)	ENSIPUG00000010579	TXNDC12 (ENSIPUG00000010548)	gipc2 (ENSIPUG00000010513) #19	ENSIPUG00000010499	DNAJB4 (ENSIPUG00000010475) #21	cope (ENSIPUG00000010433)	ST6GALNAC3 (ENSIPUG00000010385) #30	st6galnac5a (ENSIPUG00000010334) #29	pigk (ENSIPUG00000010299) #28	ak5 (ENSIPUG00000010174) #27	Zzz3 (ENSIPUG00000010125) #26	usp33 (ENSIPUG00000010029) #25	miga1 (ENSIPUG00000009979) #24	fubp1 (ENSIPUG00000009896) #22	ENSIPUG00000009860	si:ch211-71m22.1 (ENSIPUG00000009845)	ENSIPUG00000009832	dipk2aa (ENSIPUG00000009823)	Chst2 (ENSIPUG00000009807)	pls1 (ENSIPUG00000009762)	PCOLCE2 (ENSIPUG00000009742)	ephb3a (ENSIPUG00000009725)	ENSIPUG00000009690	ENSIPUG00000009657	tbl1xr1b (ENSIPUG00000009615)	b3gnt5 (ENSIPUG00000009605)	EIF4A2 (ENSIPUG00000009463)	DCUN1D1 (ENSIPUG00000009412)	ccdc39 (ENSIPUG00000009367)
Cyprinoidei	ANCESTRAL SPECIES	61			ENSGT00390000015010	ENSGT00940000154552	ENSGT00940000153783.b.b.d.q	ENSGT00940000159676.b	ENSGT00940000153421.a.a.a.a.a	ENSGT00950000183039.B.b.d	ENSGT00950000183039.B.a	ENSGT00940000167389	ENSGT00940000158024.B	ENSGT00950000183097.a.b	ENSGT00940000165699.A.a.a	ENSGT00940000165699.A.a.b	ENSGT00940000165351.i.a	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000003478	ENSGT00940000157207.b	ENSGT00940000156826 #21	ENSGT00390000003420.a.b.i.a #19	ENSGT00530000063273.a	ENSGT00390000016906.a	ENSGT00390000011127.d	ENSGT00940000153655.A.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000160043.a #22
Goldfish	MODERN SPECIES	11	dcun1d1 (ENSCARG00000062356)	eif4a2 (ENSCARG00000060099)	b3gnt5b (ENSCARG00000059905)	tbl1xr1b (ENSCARG00000059737)	kcnmb2 (ENSCARG00000059706)	ENSCARG00000059681	ENSCARG00000059656	ephb3a (ENSCARG00000059411)	pls1 (ENSCARG00000059014)	chst2a (ENSCARG00000058965)	dipk2aa (ENSCARG00000058945)	ENSCARG00000058847	si:ch211-71m22.1 (ENSCARG00000058723)	ENSCARG00000058692	ENSCARG00000058680	fubp1 (ENSCARG00000054812) #22	miga1 (ENSCARG00000053666) #24	PCSK6 (ENSCARG00000053537)	ENSCARG00000053511	ENSCARG00000053482	ADISSP (ENSCARG00000053449)	vax2 (ENSCARG00000053431)	ENSCARG00000053415	tex261 (ENSCARG00000053380)	ENSCARG00000053370	ENSCARG00000053366	ENSCARG00000053360	LRP8 (ENSCARG00000053240)	ENSCARG00000053213	PGM1 (ENSCARG00000052861)	JAK1 (ENSCARG00000051834)
Cyprininae_a	ANCESTRAL SPECIES	152	ENSGT00940000164654.b	ENSGT01100000264057	ENSGT00390000015010.b	ENSGT00940000154552.c	ENSGT00940000153783.b.b.d.q.a	ENSGT00940000159676.b.a	ENSGT00940000153421.a.a.a.a.a.i	ENSGT00950000183039.B.b.d	ENSGT00950000183039.B.a.c.a	ENSGT00940000167389.b	ENSGT00940000158024.B.a	ENSGT00940000157649.j.a	ENSGT00950000183097.a.b.a	ENSGT00940000161292.v.b	ENSGT00520000055625.b.k.b	ENSGT00940000160043.a #22	ENSGT00390000008565.b.n #24	ENSGT00940000157311.l #25	ENSGT00390000005307.r #26	ENSGT00940000155917.db.b #27	ENSGT00940000156273.w #28	ENSGT00940000157634.d.d #29	ENSGT00940000159735.a #30	ENSGT00390000003478.o	ENSGT00940000157207.b.d	ENSGT00940000156826.e #21	ENSGT00390000003420.a.b.i.a #19	ENSGT00530000063273.a.c	ENSGT00390000016906.a.e	ENSGT00390000011127.d.b	ENSGT00940000155265.a.g.a
Golden-line barbel	MODERN SPECIES	632														si:ch211-71m22.1 (ENSSGRG00000012525)	ENSSGRG00000012526	fubp1 (ENSSGRG00000012528) #22	miga1 (ENSSGRG00000012529) #24	usp33 (ENSSGRG00000012530) #25	zzz3 (ENSSGRG00000012531) #26	ak5 (ENSSGRG00000012533) #27	pigk (ENSSGRG00000012534) #28	ST6GALNAC5 (ENSSGRG00000012535) #29	st6galnac3 (ENSSGRG00000012537) #30	cope (ENSSGRG00000012539)
Cyprininae	ANCESTRAL SPECIES	67	ENSGT00390000015010.a.b	ENSGT00940000154552.d	ENSGT00940000153783.b.b.d.q.b	ENSGT00940000159676.b.b	ENSGT00940000153421.a.a.a.a.a.j	ENSGT00950000183039.B.a.c.b	ENSGT00940000167389.a	ENSGT00940000158024.B.b	ENSGT00940000157649.j.b	ENSGT00950000183097.a.b.b	ENSGT00940000161292.v.a	ENSGT00520000055625.b.k.a	ENSGT00940000165699.A.a.a.a.a.b	ENSGT00940000165699.A.a.b	ENSGT00940000165351.i.a.a	ENSGT00940000160043.b #22	ENSGT00390000008565.b.m #24	ENSGT00940000157311.k #25	ENSGT00390000005307.q #26	ENSGT00940000155917.db.a #27	ENSGT00940000156273.x #28	ENSGT00940000157634.d.c #29	ENSGT00940000159735.b #30	ENSGT00390000003478.p	ENSGT00940000157207.b.c	ENSGT00390000003420.a.b.i.b.a #19	ENSGT00530000063273.a.d	ENSGT00390000016906.a.f	ENSGT00390000011127.d.a	ENSGT00940000153655.A.b	ENSGT00390000011725.d.`b
Cyprininae_a	ANCESTRAL SPECIES	88	ENSGT00940000154552.d	ENSGT00940000153783.b.b.d.q.b	ENSGT00940000159676.b.b	ENSGT00940000153421.a.a.a.a.a.j	ENSGT00950000183039.B.a.d	ENSGT00940000167389.a	ENSGT00940000158024.B.b	ENSGT00940000157649.j.b	ENSGT00950000183097.a.b.b	ENSGT00940000161292.v.a	ENSGT00520000055625.b.k.a	ENSGT00940000165699.A.a.a.a.a.b	ENSGT00940000165699.A.a.a.a.b	ENSGT00940000165699.A.a.b	ENSGT00940000165351.i.a.a	ENSGT00940000160043.b #22	ENSGT00390000008565.b.m #24	ENSGT00940000157311.k #25	ENSGT00390000005307.q #26	ENSGT00940000155917.db.a #27	ENSGT00940000156273.x #28	ENSGT00940000157634.d.c #29	ENSGT00940000159735.b #30	ENSGT00390000003478.p	ENSGT00940000157207.b.c	ENSGT00940000156826.f #21	ENSGT00390000003420.a.b.j #19	ENSGT00390000003420.a.b.i.b.a #19	ENSGT00530000063273.a.d	ENSGT00390000016906.a.f	ENSGT00390000011127.d.a
Golden-line barbel	MODERN SPECIES	272					ENSSGRG00000008645	ENSSGRG00000008646	ENSSGRG00000008647	ephb3a (ENSSGRG00000008650)	PCOLCE2 (ENSSGRG00000008723)	pls1 (ENSSGRG00000008724)	chst2a (ENSSGRG00000008726)	dipk2aa (ENSSGRG00000008728)	si:ch211-71m22.1 (ENSSGRG00000008730)	ENSSGRG00000008731	si:ch211-71m22.3 (ENSSGRG00000008732)	fubp1 (ENSSGRG00000008750) #22	miga1 (ENSSGRG00000010621) #24	usp33 (ENSSGRG00000011826) #25	zzz3 (ENSSGRG00000011904) #26	ak5 (ENSSGRG00000012162) #27	pigk (ENSSGRG00000012314) #28	ST6GALNAC5 (ENSSGRG00000012365) #29	st6galnac3 (ENSSGRG00000012366) #30	cope (ENSSGRG00000012371)	slc25a24l (ENSSGRG00000012565)	dnajb4 (ENSSGRG00000012566) #21	ENSSGRG00000012567 #19	gipc2 (ENSSGRG00000012568) #19	txndc12 (ENSSGRG00000012569)	ENSSGRG00000012572	zgc:153615 (ENSSGRG00000012577)
Goldfish	MODERN SPECIES	19	CCDC39 (ENSCARG00000033545)	dcun1d1 (ENSCARG00000033494)	eif4a2 (ENSCARG00000032997)	b3gnt5b (ENSCARG00000032906)	tbl1xr1b (ENSCARG00000032749)	ENSCARG00000032714	ENSCARG00000032681	ephb3a (ENSCARG00000032537)	PCOLCE2 (ENSCARG00000032417)	pls1 (ENSCARG00000032159)	chst2a (ENSCARG00000032131)	dipk2aa (ENSCARG00000032113)	si:ch211-71m22.1 (ENSCARG00000032104)	ENSCARG00000031963	si:ch211-71m22.3 (ENSCARG00000031946)	fubp1 (ENSCARG00000030655) #22	ENSCARG00000030577	usp33 (ENSCARG00000024502) #25	zzz3 (ENSCARG00000024229) #26	ENSCARG00000024224	ak5 (ENSCARG00000023612) #27	pigk (ENSCARG00000023487) #28	ST6GALNAC5 (ENSCARG00000023469) #29	st6galnac3 (ENSCARG00000023446) #30	cope (ENSCARG00000023364)	slc25a24l (ENSCARG00000023281)	gipc2 (ENSCARG00000023237) #19	txndc12 (ENSCARG00000023225)	ENSCARG00000023179	zgc:153615 (ENSCARG00000023172)	ENSCARG00000023165
Zebrafish	MODERN SPECIES	11	dcun1d1 (ENSDARG00000099642)	eif4a2 (ENSDARG00000016477)	b3gnt5b (ENSDARG00000004396)	tbl1xr1b (ENSDARG00000008966)	kcnmb2 (ENSDARG00000006568)	ENSDARG00000063129	ENSDARG00000076959	ephb3a (ENSDARG00000031548)	PCOLCE2 (ENSDARG00000008450)	pls1 (ENSDARG00000039272)	chst2a (ENSDARG00000075007)	dipk2aa (ENSDARG00000012816)	si:ch211-71m22.1 (ENSDARG00000058638)	ENSDARG00000091266	si:ch211-71m22.3 (ENSDARG00000079075)	fubp1 (ENSDARG00000029248) #22	miga1 (ENSDARG00000020596) #24	usp33 (ENSDARG00000016163) #25	zzz3 (ENSDARG00000077581) #26	ak5 (ENSDARG00000012555) #27	pigk (ENSDARG00000024479) #28	ST6GALNAC5 (ENSDARG00000039220) #29	st6galnac3 (ENSDARG00000058473) #30	cope (ENSDARG00000018562)	slc25a24l (ENSDARG00000038977)	ENSDARG00000115192	dnajb4 (ENSDARG00000038978) #21	gipc2 (ENSDARG00000009488) #19	txndc12 (ENSDARG00000038980)	ENSDARG00000067814	SCHIP1 (ENSDARG00000038981)
Clupeiformes	ANCESTRAL SPECIES	168	ENSGT00950000182863.B.a	ENSGT00390000015871	ENSGT00940000159586	ENSGT00940000154365.a.a	ENSGT00940000158974	ENSGT01100000263569.a.a	ENSGT00940000164727.a.a	ENSGT00940000164727.b	ENSGT00940000160805	ENSGT00940000159126	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000003478
Atlantic herring	MODERN SPECIES	14	TMEM200C (ENSCHAG00000003706)	ENSCHAG00000003713	ENSCHAG00000003740	PTPRM (ENSCHAG00000003875)	ENSCHAG00000006966	ENSCHAG00000006979	PTPRM (ENSCHAG00000007085)	asic1c (ENSCHAG00000010093)	ENSCHAG00000010164	cdk5 (ENSCHAG00000010193)	abcb8 (ENSCHAG00000010415)	txndc12 (ENSCHAG00000010714)	gipc2 (ENSCHAG00000010797) #19	dnajb4 (ENSCHAG00000010821) #21	slc25a24l (ENSCHAG00000010845)	fubp1 (ENSCHAG00000010859) #22	miga1 (ENSCHAG00000010992) #24	usp33 (ENSCHAG00000012239) #25	zzz3 (ENSCHAG00000013570) #26	ak5 (ENSCHAG00000013698) #27	pigk (ENSCHAG00000013796) #28	ST6GALNAC5 (ENSCHAG00000014093) #29	st6galnac3 (ENSCHAG00000014108) #30	CERS1 (ENSCHAG00000014120)	cope (ENSCHAG00000014158)	ENSCHAG00000014349	ENSCHAG00000014379	ENSCHAG00000014420	dipk2aa (ENSCHAG00000014605)	chst2a (ENSCHAG00000014628)	pls1 (ENSCHAG00000014673)
Euteleosteomorpha	ANCESTRAL SPECIES	46	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h
Acanthomorphata	ANCESTRAL SPECIES		ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h
Cod	MODERN SPECIES	21	ENSGMOG00000029867	penka (ENSGMOG00000036334)	ENSGMOG00000018166	ENSGMOG00000018990 #35	ENSGMOG00000032122	ENSGMOG00000011946	ENSGMOG00000011934	ENSGMOG00000011928	txndc12 (ENSGMOG00000011925)	gipc2 (ENSGMOG00000011921) #19	ENSGMOG00000024997	dnajb4 (ENSGMOG00000036582) #21	slc25a24l (ENSGMOG00000011914)	ENSGMOG00000022334	ENSGMOG00000032110	fubp1 (ENSGMOG00000003370) #22	miga1 (ENSGMOG00000003335) #24	usp33 (ENSGMOG00000003277) #25	zzz3 (ENSGMOG00000003250) #26	ak5 (ENSGMOG00000014379) #27	pigk (ENSGMOG00000014349) #28	ENSGMOG00000023243	ST6GALNAC3 (ENSGMOG00000036570) #30	ENSGMOG00000001555 #33	ACADM (ENSGMOG00000002386) #34	ENSGMOG00000003142	ENSGMOG00000001572	ENSGMOG00000032689	ENSGMOG00000031099	ENSGMOG00000033898	ENSGMOG00000025113
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00390000018077 #31	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h
Pinecone sodierfish	MODERN SPECIES	8	PIEZO2 (ENSMMDG00005021307)	ENSMMDG00005021389	mppe1 (ENSMMDG00005021394)	ENSMMDG00005021423	MAK (ENSMMDG00005021473)	tmem14cb (ENSMMDG00005021476)	pak1ip1 (ENSMMDG00005021477)	si:dkey-222f8.3 (ENSMMDG00005021480)	CC2D1B (ENSMMDG00005021485)	ZFYVE9 (ENSMMDG00005021504)	btf3l4 (ENSMMDG00005021506)	txndc12 (ENSMMDG00005021507)	gipc2 (ENSMMDG00005021509) #19	dnajb4 (ENSMMDG00005021511) #21	slc25a24l (ENSMMDG00005021512)	fubp1 (ENSMMDG00005021522) #22	miga1 (ENSMMDG00005021540) #24	usp33 (ENSMMDG00005021617) #25	zzz3 (ENSMMDG00005023252) #26	ak5 (ENSMMDG00005023291) #27	pigk (ENSMMDG00005023297) #28	ST6GALNAC5 (ENSMMDG00005023302) #29	st6galnac3 (ENSMMDG00005023306) #30	ASB17 (ENSMMDG00005023309) #31	rabggtb (ENSMMDG00005023311) #33	acadm (ENSMMDG00005023324) #34	rps8a (ENSMMDG00005023497)	hectd3 (ENSMMDG00005023503)	BEST4 (ENSMMDG00005023507)	ENSMMDG00005023508	ENSMMDG00005023509
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Tiger tail seahorse	MODERN SPECIES	488	ENSHCOG00000000991	ENSHCOG00000000987	CAPN10 (ENSHCOG00000000983)	eif4e2 (ENSHCOG00000000972)	ENSHCOG00000000967	chrng (ENSHCOG00000000965)	ENSHCOG00000000957	ENSHCOG00000000955	ENSHCOG00000000951	ZFYVE9 (ENSHCOG00000000943)	ENSHCOG00000000936	txndc12 (ENSHCOG00000000931)	gipc2 (ENSHCOG00000000927) #19	dnajb4 (ENSHCOG00000000924) #21	slc25a24l (ENSHCOG00000000916)	fubp1 (ENSHCOG00000000910) #22	miga1 (ENSHCOG00000000905) #24	usp33 (ENSHCOG00000000900) #25	zzz3 (ENSHCOG00000021050) #26	ak5 (ENSHCOG00000021040) #27	pigk (ENSHCOG00000020986) #28	ST6GALNAC5 (ENSHCOG00000020939) #29
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Pomacentridae	ANCESTRAL SPECIES	46	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Pomacentridae_A	ANCESTRAL SPECIES	94	ENSGT00940000154456.hb.a.g.a	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159687
Amphiprion	ANCESTRAL SPECIES	116	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000177091	ENSGT00530000063859.a	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000165774	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159687
Orange clownfish	MODERN SPECIES	1	PIEZO2 (ENSAPEG00000012914)	ENSAPEG00000012773	mppe1 (ENSAPEG00000012757)	ENSAPEG00000012708	MAK (ENSAPEG00000012624)	tmem14cb (ENSAPEG00000012594)	pak1ip1 (ENSAPEG00000012581)	si:dkey-222f8.3 (ENSAPEG00000012563)	CC2D1B (ENSAPEG00000012528)	ZFYVE9 (ENSAPEG00000012432)	btf3l4 (ENSAPEG00000012408)	txndc12 (ENSAPEG00000012380)	gipc2 (ENSAPEG00000012346) #19	dnajb4 (ENSAPEG00000012332) #21	slc25a24l (ENSAPEG00000012301)	fubp1 (ENSAPEG00000012232) #22	miga1 (ENSAPEG00000012205) #24	usp33 (ENSAPEG00000012070) #25	zzz3 (ENSAPEG00000012036) #26	ak5 (ENSAPEG00000011898) #27	pigk (ENSAPEG00000011883) #28	ST6GALNAC5 (ENSAPEG00000011864) #29	ENSAPEG00000011833	ENSAPEG00000011820	ENSAPEG00000011792	st6galnac3 (ENSAPEG00000011715) #30	rabggtb (ENSAPEG00000011563) #33	ENSAPEG00000011508	ENSAPEG00000011469	rps8a (ENSAPEG00000011451)	hectd3 (ENSAPEG00000011358)
Spiny chromis	MODERN SPECIES	1878															slc25a24l (ENSAPOG00000014903)	fubp1 (ENSAPOG00000014845) #22	miga1 (ENSAPOG00000014748) #24	usp33 (ENSAPOG00000014665) #25	zzz3 (ENSAPOG00000014552) #26
Bicolor damselfish	MODERN SPECIES	403	PIEZO2 (ENSSPAG00000010684)	ENSSPAG00000010653	mppe1 (ENSSPAG00000010631)	ENSSPAG00000010610	MAK (ENSSPAG00000010584)	TMEM14C (ENSSPAG00000010573)	pak1ip1 (ENSSPAG00000010552)	si:dkey-222f8.3 (ENSSPAG00000010511)	CC2D1B (ENSSPAG00000010467)	ZFYVE9 (ENSSPAG00000010386)	btf3l4 (ENSSPAG00000010347)	txndc12 (ENSSPAG00000010321)	gipc2 (ENSSPAG00000010297) #19	dnajb4 (ENSSPAG00000010288) #21	slc25a24l (ENSSPAG00000010220)	fubp1 (ENSSPAG00000010161) #22	miga1 (ENSSPAG00000010118) #24	usp33 (ENSSPAG00000010040) #25	ENSSPAG00000010013	zzz3 (ENSSPAG00000009994) #26	ENSSPAG00000009942 #27
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Burton s mouthbrooder	MODERN SPECIES	335	ENSHBUG00000009366	mppe1 (ENSHBUG00000009374)	ENSHBUG00000009452	TMEM14C (ENSHBUG00000009477)	MAK (ENSHBUG00000009506)	pak1ip1 (ENSHBUG00000000241)	si:dkey-222f8.3 (ENSHBUG00000009526)	CC2D1B (ENSHBUG00000009554)	ZFYVE9 (ENSHBUG00000009660)	ENSHBUG00000009689	txndc12 (ENSHBUG00000009717)	gipc2 (ENSHBUG00000009740) #19	ENSHBUG00000009757	dnajb4 (ENSHBUG00000009765) #21	slc25a24l (ENSHBUG00000009791)	fubp1 (ENSHBUG00000009835) #22	miga1 (ENSHBUG00000009962) #24	usp33 (ENSHBUG00000010087) #25	zzz3 (ENSHBUG00000010108) #26	ak5 (ENSHBUG00000001125) #27	pigk (ENSHBUG00000010170) #28	ST6GALNAC5 (ENSHBUG00000010180) #29	st6galnac3 (ENSHBUG00000010196) #30	rabggtb (ENSHBUG00000010217) #33	acadm (ENSHBUG00000010315) #34	ENSHBUG00000010333	rps8a (ENSHBUG00000000275)	hectd3 (ENSHBUG00000010416)	BEST4 (ENSHBUG00000010465)	ENSHBUG00000010474	ENSHBUG00000010510
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273.ab #28	ENSGT00940000156273.`b.a #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h
P. nyererei	MODERN SPECIES	326	ENSPNYG00000005232	mppe1 (ENSPNYG00000005113)	ENSPNYG00000005065	MAK (ENSPNYG00000005029)	TMEM14C (ENSPNYG00000005011)	pak1ip1 (ENSPNYG00000004975)	si:dkey-222f8.3 (ENSPNYG00000004955)	CC2D1B (ENSPNYG00000004922)	ZFYVE9 (ENSPNYG00000004874)	btf3l4 (ENSPNYG00000004837)	txndc12 (ENSPNYG00000004764)	gipc2 (ENSPNYG00000004715) #19	ENSPNYG00000004691	dnajb4 (ENSPNYG00000004666) #21	slc25a24l (ENSPNYG00000004638)	fubp1 (ENSPNYG00000004552) #22	miga1 (ENSPNYG00000004491) #24	usp33 (ENSPNYG00000004390) #25	zzz3 (ENSPNYG00000004362) #26	ak5 (ENSPNYG00000004317) #27	pigk (ENSPNYG00000004245) #28	ST6GALNAC5 (ENSPNYG00000004180) #29	st6galnac3 (ENSPNYG00000004156) #30	rabggtb (ENSPNYG00000004105) #33	acadm (ENSPNYG00000004050) #34	ENSPNYG00000004002	rps8a (ENSPNYG00000003978)	hectd3 (ENSPNYG00000003874)	ENSPNYG00000003858	ENSPNYG00000003853	ENSPNYG00000003829
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273.ab #28	ENSGT00940000156273.`b.a #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h
Eastern happy	MODERN SPECIES	9	PIEZO2 (ENSACLG00000007565)	ENSACLG00000007536	mppe1 (ENSACLG00000007524)	ENSACLG00000007505	MAK (ENSACLG00000006992)	tmem14cb (ENSACLG00000006979)	pak1ip1 (ENSACLG00000006964)	si:dkey-222f8.3 (ENSACLG00000006962)	CC2D1B (ENSACLG00000006925)	ZFYVE9 (ENSACLG00000006880)	btf3l4 (ENSACLG00000006861)	txndc12 (ENSACLG00000006849)	gipc2 (ENSACLG00000006832) #19	dnajb4 (ENSACLG00000006816) #21	slc25a24l (ENSACLG00000006799)	fubp1 (ENSACLG00000006708) #22	miga1 (ENSACLG00000006648) #24	usp33 (ENSACLG00000006588) #25	zzz3 (ENSACLG00000006439) #26	ak5 (ENSACLG00000006379) #27	pigk (ENSACLG00000006362) #28	ST6GALNAC5 (ENSACLG00000006358) #29	st6galnac3 (ENSACLG00000006347) #30	rabggtb (ENSACLG00000006321) #33	acadm (ENSACLG00000006282) #34	ENSACLG00000006249	rps8a (ENSACLG00000006224)	hectd3 (ENSACLG00000006150)	BEST4 (ENSACLG00000006134)	ENSACLG00000006129	ENSACLG00000006110
Zebra mbuna	MODERN SPECIES	1100	PIEZO2 (ENSMZEG00005024314)	ENSMZEG00005024313	mppe1 (ENSMZEG00005024312)	ENSMZEG00005024311	MAK (ENSMZEG00005024310)	ENSMZEG00005024309	pak1ip1 (ENSMZEG00005024308)	si:dkey-222f8.3 (ENSMZEG00005024307)	CC2D1B (ENSMZEG00005024305)	ZFYVE9 (ENSMZEG00005024304)	btf3l4 (ENSMZEG00005024303)	txndc12 (ENSMZEG00005024302)	gipc2 (ENSMZEG00005024301) #19	dnajb4 (ENSMZEG00005024300) #21	slc25a24l (ENSMZEG00005024299)	fubp1 (ENSMZEG00005024298) #22	miga1 (ENSMZEG00005024297) #24	usp33 (ENSMZEG00005024296) #25	zzz3 (ENSMZEG00005024295) #26	ak5 (ENSMZEG00005024294) #27	pigk (ENSMZEG00005024292) #28	ak5 (ENSMZEG00005024288) #27	pigk (ENSMZEG00005024286) #28	ST6GALNAC5 (ENSMZEG00005024284) #29	st6galnac3 (ENSMZEG00005024282) #30	rabggtb (ENSMZEG00005024279) #33	acadm (ENSMZEG00005024275) #34	ENSMZEG00005024267	rps8a (ENSMZEG00005024263)	hectd3 (ENSMZEG00005024256)	BEST4 (ENSMZEG00005024254)
Lyretail cichlid	MODERN SPECIES	313	PIEZO2 (ENSNBRG00000014529)	ENSNBRG00000014652	mppe1 (ENSNBRG00000014688)	ENSNBRG00000014749	tmem14cb (ENSNBRG00000014782)	pak1ip1 (ENSNBRG00000014793)	si:dkey-222f8.3 (ENSNBRG00000014825)	CC2D1B (ENSNBRG00000014897)	ZFYVE9 (ENSNBRG00000014923)	ENSNBRG00000014985	txndc12 (ENSNBRG00000015003)	gipc2 (ENSNBRG00000015027) #19	ENSNBRG00000015049	dnajb4 (ENSNBRG00000015058) #21	slc25a24l (ENSNBRG00000015069)	fubp1 (ENSNBRG00000015099) #22	miga1 (ENSNBRG00000015136) #24	usp33 (ENSNBRG00000015153) #25	zzz3 (ENSNBRG00000015236) #26	ak5 (ENSNBRG00000015295) #27	ENSNBRG00000015338	pigk (ENSNBRG00000015359) #28	ENSNBRG00000015428	ST6GALNAC5 (ENSNBRG00000015466) #29	st6galnac3 (ENSNBRG00000015478) #30	rabggtb (ENSNBRG00000015492) #33	ENSNBRG00000015514 #34	rps8a (ENSNBRG00000015531)	ENSNBRG00000015566	hectd3 (ENSNBRG00000015578)	BEST4 (ENSNBRG00000015622)
Nile tilapia	MODERN SPECIES	9	PIEZO2 (ENSONIG00000018464)	ENSONIG00000018462	mppe1 (ENSONIG00000037883)	MAK (ENSONIG00000018450)	TMEM14C (ENSONIG00000027870)	pak1ip1 (ENSONIG00000018445)	si:dkey-222f8.3 (ENSONIG00000035715)	CC2D1B (ENSONIG00000018435)	ZFYVE9 (ENSONIG00000018433)	BTF3L4 (ENSONIG00000039286)	txndc12 (ENSONIG00000041938)	gipc2 (ENSONIG00000018416) #19	ENSONIG00000031879	dnajb4 (ENSONIG00000033460) #21	slc25a24l (ENSONIG00000018403)	fubp1 (ENSONIG00000018381) #22	miga1 (ENSONIG00000018376) #24	usp33 (ENSONIG00000018371) #25	zzz3 (ENSONIG00000018369) #26	ak5 (ENSONIG00000018367) #27	pigk (ENSONIG00000018363) #28	ST6GALNAC5 (ENSONIG00000018361) #29	st6galnac3 (ENSONIG00000018360) #30	rabggtb (ENSONIG00000018359) #33	acadm (ENSONIG00000018357) #34	rps8a (ENSONIG00000018356)	hectd3 (ENSONIG00000018354)	BEST4 (ENSONIG00000018352)	ENSONIG00000032218	ENSONIG00000043175	hnrnpc (ENSONIG00000018350)
Midas cichlid	MODERN SPECIES	621	ENSACIG00000020497	mppe1 (ENSACIG00000020465)	ENSACIG00000020458	ENSACIG00000020440	MAK (ENSACIG00000020417)	tmem14cb (ENSACIG00000020402)	pak1ip1 (ENSACIG00000020325)	si:dkey-222f8.3 (ENSACIG00000020309)	CC2D1B (ENSACIG00000020206)	ZFYVE9 (ENSACIG00000020164)	btf3l4 (ENSACIG00000020123)	txndc12 (ENSACIG00000020104)	gipc2 (ENSACIG00000020088) #19	dnajb4 (ENSACIG00000020076) #21	slc25a24l (ENSACIG00000020058)	fubp1 (ENSACIG00000020024) #22	miga1 (ENSACIG00000020000) #24	usp33 (ENSACIG00000019951) #25	zzz3 (ENSACIG00000019906) #26	ENSACIG00000019874 #27
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000155271.lb	ENSGT00530000063859.a	ENSGT01090000260059.a.b.a.a.a	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000155271.lb	ENSGT00530000063859.a	ENSGT01090000260059.a.b.a.a.a	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Aplocheiloidei	ANCESTRAL SPECIES	11	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Mangrove rivulus	MODERN SPECIES	17	napgb (ENSKMAG00000020014)	PIEZO2 (ENSKMAG00000019576)	ENSKMAG00000019428	mppe1 (ENSKMAG00000019408)	ENSKMAG00000019370	tmem14cb (ENSKMAG00000019353)	pak1ip1 (ENSKMAG00000019342)	si:dkey-222f8.3 (ENSKMAG00000019321)	CC2D1B (ENSKMAG00000019290)	ZFYVE9 (ENSKMAG00000019231)	ENSKMAG00000019191	txndc12 (ENSKMAG00000019157)	gipc2 (ENSKMAG00000019128) #19	dnajb4 (ENSKMAG00000019108) #21	slc25a24l (ENSKMAG00000019082)	fubp1 (ENSKMAG00000018897) #22	miga1 (ENSKMAG00000018849) #24	usp33 (ENSKMAG00000018764) #25	zzz3 (ENSKMAG00000018732) #26	ak5 (ENSKMAG00000018676) #27	pigk (ENSKMAG00000018617) #28	ST6GALNAC5 (ENSKMAG00000018598) #29	st6galnac3 (ENSKMAG00000018582) #30	rabggtb (ENSKMAG00000018533) #33	acadm (ENSKMAG00000018507) #34	ENSKMAG00000018461	rps8a (ENSKMAG00000018438)	hectd3 (ENSKMAG00000018420)	hectd3 (ENSKMAG00000018379)	BEST4 (ENSKMAG00000018345)	ENSKMAG00000018337
Turquoise killifish	MODERN SPECIES	1618	NAPG (ENSNFUG00015013262)	ENSNFUG00015013040	ENSNFUG00015013037	CABZ01050249.1 (ENSNFUG00015013032)	MPPE1 (ENSNFUG00015013014)	GNAL (ENSNFUG00015011971)	tmem14cb (ENSNFUG00015011885)	PAK1IP1 (ENSNFUG00015011874)	Nfu_g_1_013285 (ENSNFUG00015011862)	CC2D1B (ENSNFUG00015011536)	ZFYVE9 (ENSNFUG00015011292)	btf3l4 (ENSNFUG00015011231)	TXNDC12 (ENSNFUG00015011221)	GIPC2 (ENSNFUG00015011209) #19	DNAJB4 (ENSNFUG00015011201) #21	fubp1 (ENSNFUG00015010818) #22	FAM73A (ENSNFUG00015010766) #24	USP33 (ENSNFUG00015010407) #25	ZZZ3 (ENSNFUG00015010289) #26	AK5 (ENSNFUG00015010249) #27	ENSNFUG00015010234	PIGK (ENSNFUG00015009451) #28	ST6GALNAC5 (ENSNFUG00015009413) #29	st6galnac3 (ENSNFUG00015009407) #30	RABGGTB (ENSNFUG00015009337) #33	ACADM (ENSNFUG00015009127) #34	rps8a (ENSNFUG00015009063)	ENSNFUG00015022991	HECTD3 (ENSNFUG00015022946)	ENSNFUG00015022926	GLIS1A (ENSNFUG00015022920)
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000166993	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Poecilia	ANCESTRAL SPECIES	16	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
NAME_6	ANCESTRAL SPECIES	145					ENSGT00390000013236	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Sailfin molly	MODERN SPECIES	112											ENSPLAG00000021243 #19	ENSPLAG00000021232	ENSPLAG00000021219 #19	dnajb4 (ENSPLAG00000021208) #21	slc25a24l (ENSPLAG00000021205)	fubp1 (ENSPLAG00000021170) #22	miga1 (ENSPLAG00000021001) #24	usp33 (ENSPLAG00000020930) #25	zzz3 (ENSPLAG00000020835) #26	MEIS2 (ENSPLAG00000020806)	spred1 (ENSPLAG00000020413)	fam98b (ENSPLAG00000020372)	PTPN21 (ENSPLAG00000020361)	ENSPLAG00000020288	pnn (ENSPLAG00000020277)	gemin2 (ENSPLAG00000020265)	ENSPLAG00000020221	ENSPLAG00000020179	RALGAPA1 (ENSPLAG00000020087)
Amazon molly	MODERN SPECIES	458			mppe1 (ENSPFOG00000000062)	ENSPFOG00000000072	ENSPFOG00000024561	tmem14cb (ENSPFOG00000000084)	pak1ip1 (ENSPFOG00000000086)	si:dkey-222f8.3 (ENSPFOG00000000094)	CC2D1B (ENSPFOG00000000104)	ZFYVE9 (ENSPFOG00000000125)	btf3l4 (ENSPFOG00000000147)	txndc12 (ENSPFOG00000000155)	gipc2 (ENSPFOG00000023001) #19	dnajb4 (ENSPFOG00000000169) #21	slc25a24l (ENSPFOG00000000196)	fubp1 (ENSPFOG00000000238) #22	miga1 (ENSPFOG00000000368) #24	usp33 (ENSPFOG00000000441) #25	zzz3 (ENSPFOG00000000834) #26	ak5 (ENSPFOG00000001049) #27	pigk (ENSPFOG00000001237) #28	ST6GALNAC5 (ENSPFOG00000001453) #29	st6galnac3 (ENSPFOG00000001486) #30	rabggtb (ENSPFOG00000001581) #33	acadm (ENSPFOG00000001751) #34	rps8a (ENSPFOG00000001950)	hectd3 (ENSPFOG00000002031)	BEST4 (ENSPFOG00000002411)	ENSPFOG00000002616	ENSPFOG00000002618	hnrnpc (ENSPFOG00000002643)
Guppy	MODERN SPECIES	447	napgb (ENSPREG00000017512)	PIEZO2 (ENSPREG00000017564)	ENSPREG00000017652	mppe1 (ENSPREG00000017677)	ENSPREG00000017707	ENSPREG00000017733	pak1ip1 (ENSPREG00000017743)	si:dkey-222f8.3 (ENSPREG00000017762)	CC2D1B (ENSPREG00000017781)	ZFYVE9 (ENSPREG00000017809)	btf3l4 (ENSPREG00000017828)	txndc12 (ENSPREG00000017837)	gipc2 (ENSPREG00000017852) #19	dnajb4 (ENSPREG00000017864) #21	slc25a24l (ENSPREG00000017876)	fubp1 (ENSPREG00000017911) #22	miga1 (ENSPREG00000017989) #24	usp33 (ENSPREG00000018034) #25	zzz3 (ENSPREG00000018063) #26	ak5 (ENSPREG00000018078) #27	pigk (ENSPREG00000018114) #28	ST6GALNAC5 (ENSPREG00000018210) #29	st6galnac3 (ENSPREG00000018236) #30	rabggtb (ENSPREG00000018324) #33	acadm (ENSPREG00000018349) #34	ENSPREG00000018432	rps8a (ENSPREG00000018450)	ENSPREG00000018526	hectd3 (ENSPREG00000018551)	ENSPREG00000018607	FZD8 (ENSPREG00000018652)
Platyfish	MODERN SPECIES	20	PIEZO2 (ENSXMAG00000000891)	ENSXMAG00000024174	mppe1 (ENSXMAG00000000933)	ENSXMAG00000000950	tmem14cb (ENSXMAG00000001000)	pak1ip1 (ENSXMAG00000001001)	si:dkey-222f8.3 (ENSXMAG00000001012)	CC2D1B (ENSXMAG00000001022)	ZFYVE9 (ENSXMAG00000001059)	btf3l4 (ENSXMAG00000024847)	txndc12 (ENSXMAG00000025466)	gipc2 (ENSXMAG00000001081) #19	dnajb4 (ENSXMAG00000027168) #21	ENSXMAG00000026951	slc25a24l (ENSXMAG00000007263)	fubp1 (ENSXMAG00000007168) #22	miga1 (ENSXMAG00000007120) #24	usp33 (ENSXMAG00000016309) #25	zzz3 (ENSXMAG00000028108) #26	ak5 (ENSXMAG00000016357) #27	pigk (ENSXMAG00000016375) #28	ST6GALNAC5 (ENSXMAG00000016398) #29	st6galnac3 (ENSXMAG00000016401) #30	rabggtb (ENSXMAG00000021116) #33	acadm (ENSXMAG00000014941) #34	rps8a (ENSXMAG00000014999)	ENSXMAG00000020989	hectd3 (ENSXMAG00000015011)	ENSXMAG00000019880	BEST4 (ENSXMAG00000015069)	ENSXMAG00000028283
NAME_4	ANCESTRAL SPECIES	112	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29
Mummichog	MODERN SPECIES	2286	mppe1 (ENSFHEG00000004852)	ENSFHEG00000000810	MAK (ENSFHEG00000004903)	tmem14cb (ENSFHEG00000004912)	pak1ip1 (ENSFHEG00000004925)	si:dkey-222f8.3 (ENSFHEG00000004948)	si:dkey-222f8.3 (ENSFHEG00000004961)	CC2D1B (ENSFHEG00000004976)	ZFYVE9 (ENSFHEG00000005029)	btf3l4 (ENSFHEG00000005053)	txndc12 (ENSFHEG00000005064)	gipc2 (ENSFHEG00000005076) #19	ENSFHEG00000005079	dnajb4 (ENSFHEG00000005095) #21	slc25a24l (ENSFHEG00000005119)	fubp1 (ENSFHEG00000005230) #22
Sheepshead minnow	MODERN SPECIES	655	ENSCVAG00000013698	PIEZO2 (ENSCVAG00000013828)	ENSCVAG00000013863	mppe1 (ENSCVAG00000013882)	ENSCVAG00000013908	TMEM14C (ENSCVAG00000013918)	pak1ip1 (ENSCVAG00000013928)	si:dkey-222f8.3 (ENSCVAG00000013979)	CC2D1B (ENSCVAG00000013991)	ZFYVE9 (ENSCVAG00000014138)	btf3l4 (ENSCVAG00000014153)	txndc12 (ENSCVAG00000014172)	gipc2 (ENSCVAG00000014195) #19	dnajb4 (ENSCVAG00000014213) #21	slc25a24l (ENSCVAG00000014253)	fubp1 (ENSCVAG00000014487) #22	miga1 (ENSCVAG00000014542) #24	usp33 (ENSCVAG00000014658) #25	zzz3 (ENSCVAG00000014700) #26	ENSCVAG00000014714
Oryzias	ANCESTRAL SPECIES	25	ENSGT00940000154456.hb.a.h.l	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb.qb	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826.b #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Oryzias_a	ANCESTRAL SPECIES	25	ENSGT00940000159325	ENSGT00390000005826.b.f	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.kb.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826.b #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT01030000234592.B.e	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Japanese Medaka HdrR	MODERN SPECIES	8	ENSORLG00000003833	mppe1 (ENSORLG00000003797)	gnal (ENSORLG00000003754)	ENSORLG00000003703	pak1ip1 (ENSORLG00000003698)	si:dkey-222f8.3 (ENSORLG00000003686)	CC2D1B (ENSORLG00000003678)	ENSORLG00000021893	ZFYVE9 (ENSORLG00000003641)	BTF3L4 (ENSORLG00000003629)	txndc12 (ENSORLG00000003603)	gipc2 (ENSORLG00000003587) #19	dnajb4 (ENSORLG00000003581) #21	ENSORLG00000028199	slc25a24l (ENSORLG00000003568)	fubp1 (ENSORLG00000003540) #22	miga1 (ENSORLG00000003471) #24	usp33 (ENSORLG00000003442) #25	zzz3 (ENSORLG00000003342) #26	ak5 (ENSORLG00000003322) #27	ENSORLG00000025223	pigk (ENSORLG00000003318) #28	ST6GALNAC5 (ENSORLG00000003305) #29	st6galnac3 (ENSORLG00000003298) #30	rabggtb (ENSORLG00000003274) #33	ENSORLG00000030241 #34	ENSORLG00000003172	si:ch211-165i18.2 (ENSORLG00000003245)	rps8a (ENSORLG00000003239)	hectd3 (ENSORLG00000003223)	ENSORLG00000029279
Chinese medaka	MODERN SPECIES	643													ENSOSIG00000020340 #19	dnajb4 (ENSOSIG00000020341) #21	slc25a24l (ENSOSIG00000020342)	fubp1 (ENSOSIG00000020388) #22	miga1 (ENSOSIG00000020773) #24	usp33 (ENSOSIG00000020829) #25	ak5 (ENSOSIG00000020838) #27	pigk (ENSOSIG00000020885) #28	ST6GALNAC5 (ENSOSIG00000020975) #29	ENSOSIG00000020977	st6galnac3 (ENSOSIG00000020979) #30	rabggtb (ENSOSIG00000020992) #33	acadm (ENSOSIG00000021030) #34
Oryzias_b	ANCESTRAL SPECIES	28	ENSGT00940000154456.hb.a.h.l	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb.qb	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826.b #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Javanese ricefish	MODERN SPECIES	8	ENSOJAG00000016395	mppe1 (ENSOJAG00000016064)	ENSOJAG00000015523	tmem14cb (ENSOJAG00000015484)	pak1ip1 (ENSOJAG00000015429)	si:dkey-222f8.3 (ENSOJAG00000015415)	CC2D1B (ENSOJAG00000015370)	ZFYVE9 (ENSOJAG00000015046)	ENSOJAG00000014999	btf3l4 (ENSOJAG00000014950)	txndc12 (ENSOJAG00000014905)	ENSOJAG00000014899	gipc2 (ENSOJAG00000014881) #19	dnajb4 (ENSOJAG00000014863) #21	slc25a24l (ENSOJAG00000014854)	fubp1 (ENSOJAG00000014510) #22	miga1 (ENSOJAG00000014431) #24	usp33 (ENSOJAG00000014007) #25	zzz3 (ENSOJAG00000013770) #26	ak5 (ENSOJAG00000013725) #27	pigk (ENSOJAG00000012959) #28	ST6GALNAC5 (ENSOJAG00000012884) #29	st6galnac3 (ENSOJAG00000012874) #30	rabggtb (ENSOJAG00000012792) #33	acadm (ENSOJAG00000012451) #34	ENSOJAG00000012410	rps8a (ENSOJAG00000012374)	hectd3 (ENSOJAG00000012073)	BEST4 (ENSOJAG00000012027)	ENSOJAG00000012013	ENSOJAG00000011983
Indian medaka	MODERN SPECIES	1	ENSOMEG00000021370	mppe1 (ENSOMEG00000021401)	ENSOMEG00000021470	tmem14cb (ENSOMEG00000021488)	pak1ip1 (ENSOMEG00000021526)	si:dkey-222f8.3 (ENSOMEG00000021550)	ENSOMEG00000021560	CC2D1B (ENSOMEG00000021593)	ZFYVE9 (ENSOMEG00000021638)	btf3l4 (ENSOMEG00000000916)	txndc12 (ENSOMEG00000021705)	gipc2 (ENSOMEG00000021732) #19	ENSOMEG00000021747	dnajb4 (ENSOMEG00000021772) #21	slc25a24l (ENSOMEG00000021831)	fubp1 (ENSOMEG00000021943) #22	miga1 (ENSOMEG00000022021) #24	usp33 (ENSOMEG00000022125) #25	zzz3 (ENSOMEG00000022174) #26	ak5 (ENSOMEG00000022253) #27	ENSOMEG00000022283	pigk (ENSOMEG00000022327) #28	ST6GALNAC5 (ENSOMEG00000022345) #29	st6galnac3 (ENSOMEG00000022380) #30	rabggtb (ENSOMEG00000022414) #33	acadm (ENSOMEG00000022464) #34	ENSOMEG00000022487	ENSOMEG00000022525	rps8a (ENSOMEG00000022537)	hectd3 (ENSOMEG00000022597)	BEST4 (ENSOMEG00000022616)
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00530000063859.a	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000156907.p.b.b.a.b
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00530000063859.a	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000156907.p.b.b.a.b
Climbing perch	MODERN SPECIES	8	ENSATEG00000019103	ENSATEG00000019072	MAK (ENSATEG00000019038)	ENSATEG00000019032	ENSATEG00000019003	PAK1IP1 (ENSATEG00000018957)	ENSATEG00000018935	CC2D1B (ENSATEG00000018915)	ZFYVE9 (ENSATEG00000018858)	BTF3L4 (ENSATEG00000018819)	txndc12 (ENSATEG00000029797)	gipc2 (ENSATEG00000026857) #19	ENSATEG00000018775	dnajb4 (ENSATEG00000018768) #21	slc25a24l (ENSATEG00000018713)	fubp1 (ENSATEG00000018619) #22	miga1 (ENSATEG00000018562) #24	usp33 (ENSATEG00000018478) #25	zzz3 (ENSATEG00000018434) #26	ak5 (ENSATEG00000018393) #27	pigk (ENSATEG00000018379) #28	ST6GALNAC5 (ENSATEG00000018343) #29	st6galnac3 (ENSATEG00000018319) #30	RABGGTB (ENSATEG00000018276) #33	ACADM (ENSATEG00000018222) #34	ENSATEG00000018166	ENSATEG00000018089	ENSATEG00000018053	ENSATEG00000018047	ENSATEG00000018033	ENSATEG00000018006
Siamese fighting fish	MODERN SPECIES	8	PIEZO2 (ENSBSLG00000024869)	ENSBSLG00000024826	mppe1 (ENSBSLG00000024818)	ENSBSLG00000024667	tmem14cb (ENSBSLG00000024660)	pak1ip1 (ENSBSLG00000024657)	si:dkey-222f8.3 (ENSBSLG00000024653)	CC2D1B (ENSBSLG00000024645)	ZFYVE9 (ENSBSLG00000024505)	ENSBSLG00000024474	txndc12 (ENSBSLG00000024463)	gipc2 (ENSBSLG00000024454) #19	ENSBSLG00000024446	dnajb4 (ENSBSLG00000024435) #21	slc25a24l (ENSBSLG00000024410)	fubp1 (ENSBSLG00000024229) #22	miga1 (ENSBSLG00000024161) #24	usp33 (ENSBSLG00000023989) #25	zzz3 (ENSBSLG00000023862) #26	ak5 (ENSBSLG00000023727) #27	pigk (ENSBSLG00000023618) #28	ST6GALNAC5 (ENSBSLG00000023597) #29	st6galnac3 (ENSBSLG00000023592) #30	rabggtb (ENSBSLG00000023561) #33	acadm (ENSBSLG00000023474) #34	rps8a (ENSBSLG00000023337)	hectd3 (ENSBSLG00000023152)	ENSBSLG00000023130	ENSBSLG00000023043	hnrnpc (ENSBSLG00000023024)	ENSBSLG00000023012
Zig-zag eel	MODERN SPECIES	8	napgb (ENSMAMG00000006890)	ENSMAMG00000006959	ENSMAMG00000007186	ENSMAMG00000007195	MAK (ENSMAMG00000007231)	ENSMAMG00000007259	PAK1IP1 (ENSMAMG00000007266)	ENSMAMG00000007290	CC2D1B (ENSMAMG00000007304)	ZFYVE9 (ENSMAMG00000007336)	BTF3L4 (ENSMAMG00000007343)	txndc12 (ENSMAMG00000007357)	GIPC2 (ENSMAMG00000007365) #19	dnajb4 (ENSMAMG00000007382) #21	ENSMAMG00000007450	fubp1 (ENSMAMG00000007489) #22	miga1 (ENSMAMG00000007528) #24	usp33 (ENSMAMG00000007580) #25	zzz3 (ENSMAMG00000028427) #26	ak5 (ENSMAMG00000007686) #27	pigk (ENSMAMG00000007709) #28	ST6GALNAC5 (ENSMAMG00000007726) #29	st6galnac3 (ENSMAMG00000007739) #30	RABGGTB (ENSMAMG00000025690) #33	ACADM (ENSMAMG00000007789) #34	ENSMAMG00000007820	ENSMAMG00000007878	ENSMAMG00000007966	ENSMAMG00000007990	ENSMAMG00000008010	ENSMAMG00000008033
Carangaria	ANCESTRAL SPECIES	5	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Seriola	ANCESTRAL SPECIES	45	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Greater amberjack	MODERN SPECIES	99	PIEZO2 (ENSSDUG00000008126)	ENSSDUG00000008078	mppe1 (ENSSDUG00000008049)	ENSSDUG00000007983	MAK (ENSSDUG00000007938)	tmem14cb (ENSSDUG00000007922)	pak1ip1 (ENSSDUG00000007908)	si:dkey-222f8.3 (ENSSDUG00000007884)	CC2D1B (ENSSDUG00000007848)	ZFYVE9 (ENSSDUG00000007739)	btf3l4 (ENSSDUG00000007697)	txndc12 (ENSSDUG00000007682)	gipc2 (ENSSDUG00000007660) #19	dnajb4 (ENSSDUG00000007644) #21	slc25a24l (ENSSDUG00000007626)	fubp1 (ENSSDUG00000007383) #22	miga1 (ENSSDUG00000007337) #24	usp33 (ENSSDUG00000007306) #25	zzz3 (ENSSDUG00000007204) #26	ak5 (ENSSDUG00000007098) #27	pigk (ENSSDUG00000007051) #28	ST6GALNAC5 (ENSSDUG00000007037) #29	st6galnac3 (ENSSDUG00000007018) #30	rabggtb (ENSSDUG00000006983) #33	acadm (ENSSDUG00000006946) #34	ENSSDUG00000006901	rps8a (ENSSDUG00000006887)	hectd3 (ENSSDUG00000006820)	BEST4 (ENSSDUG00000006782)	ENSSDUG00000006773	ENSSDUG00000006754
Yellowtail amberjack	MODERN SPECIES	2861	PIEZO2 (ENSSLDG00000022301)	ENSSLDG00000022377	mppe1 (ENSSLDG00000022394)	ENSSLDG00000022410	MAK (ENSSLDG00000022445)	tmem14cb (ENSSLDG00000022469)	pak1ip1 (ENSSLDG00000022537)	si:dkey-222f8.3 (ENSSLDG00000022545)	CC2D1B (ENSSLDG00000022568)	ZFYVE9 (ENSSLDG00000022698)	ENSSLDG00000022749	txndc12 (ENSSLDG00000022778)	gipc2 (ENSSLDG00000022784) #19	dnajb4 (ENSSLDG00000022807) #21	slc25a24l (ENSSLDG00000022821)	fubp1 (ENSSLDG00000022863) #22	miga1 (ENSSLDG00000022991) #24	usp33 (ENSSLDG00000023015) #25	zzz3 (ENSSLDG00000023075) #26	ak5 (ENSSLDG00000023096) #27	pigk (ENSSLDG00000023210) #28	ST6GALNAC5 (ENSSLDG00000023218) #29
Barramundi perch	MODERN SPECIES	74	napgb (ENSLCAG00010024863)	PIEZO2 (ENSLCAG00010024868)	ENSLCAG00010024879	mppe1 (ENSLCAG00010024885)	MAK (ENSLCAG00010025184)	TMEM14C (ENSLCAG00010025190)	pak1ip1 (ENSLCAG00010025193)	si:dkey-222f8.3 (ENSLCAG00010025195)	CC2D1B (ENSLCAG00010025213)	ZFYVE9 (ENSLCAG00010025242)	btf3l4 (ENSLCAG00010025264)	txndc12 (ENSLCAG00010025278)	gipc2 (ENSLCAG00010025288) #19	dnajb4 (ENSLCAG00010025295) #21	slc25a24l (ENSLCAG00010025303)	fubp1 (ENSLCAG00010025378) #22	miga1 (ENSLCAG00010025477) #24	usp33 (ENSLCAG00010025579) #25	zzz3 (ENSLCAG00010025628) #26	ak5 (ENSLCAG00010025634) #27	pigk (ENSLCAG00010025642) #28	ST6GALNAC5 (ENSLCAG00010025649) #29	st6galnac3 (ENSLCAG00010025652) #30	rabggtb (ENSLCAG00010025655) #33	acadm (ENSLCAG00010000247) #34	rps8a (ENSLCAG00010000359)	ENSLCAG00010000412	hectd3 (ENSLCAG00010000452)	BEST4 (ENSLCAG00010000555)	ENSLCAG00010000584	ENSLCAG00010000592
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Turbot	MODERN SPECIES	19	napgb (ENSSMAG00000012598)	ENSSMAG00000012517	ENSSMAG00000012501	ENSSMAG00000012474	MAK (ENSSMAG00000012420)	ENSSMAG00000012402	PAK1IP1 (ENSSMAG00000012391)	ENSSMAG00000012370	CC2D1B (ENSSMAG00000012291)	ZFYVE9 (ENSSMAG00000012160)	BTF3L4 (ENSSMAG00000026879)	txndc12 (ENSSMAG00000012107)	gipc2 (ENSSMAG00000012092) #19	dnajb4 (ENSSMAG00000012081) #21	slc25a24l (ENSSMAG00000012061)	fubp1 (ENSSMAG00000012029) #22	miga1 (ENSSMAG00000011910) #24	usp33 (ENSSMAG00000011792) #25	zzz3 (ENSSMAG00000011774) #26	ak5 (ENSSMAG00000011684) #27	pigk (ENSSMAG00000011615) #28	ST6GALNAC5 (ENSSMAG00000011583) #29	st6galnac3 (ENSSMAG00000023694) #30	ENSSMAG00000030554	ENSSMAG00000029684	RABGGTB (ENSSMAG00000011514) #33	ENSSMAG00000011511	ACADM (ENSSMAG00000011446) #34	ENSSMAG00000011399	ENSSMAG00000011323	ENSSMAG00000011268
Tongue sole	MODERN SPECIES	12	si:ch73-382f3.1 (ENSCSEG00000021444)	ENSCSEG00000021443	mppe1 (ENSCSEG00000021442)	ENSCSEG00000021441	tmem14cb (ENSCSEG00000021423)	pak1ip1 (ENSCSEG00000021422)	si:dkey-222f8.3 (ENSCSEG00000021421)	CC2D1B (ENSCSEG00000021420)	ZFYVE9 (ENSCSEG00000021419)	ENSCSEG00000021418	txndc12 (ENSCSEG00000021417)	ENSCSEG00000021416	gipc2 (ENSCSEG00000021415) #19	dnajb4 (ENSCSEG00000021414) #21	slc25a24l (ENSCSEG00000021413)	fubp1 (ENSCSEG00000021412) #22	miga1 (ENSCSEG00000021411) #24	usp33 (ENSCSEG00000021410) #25	zzz3 (ENSCSEG00000021409) #26	ak5 (ENSCSEG00000021408) #27	pigk (ENSCSEG00000021407) #28	ST6GALNAC5 (ENSCSEG00000021406) #29	st6galnac3 (ENSCSEG00000021405) #30	rabggtb (ENSCSEG00000021404) #33	acadm (ENSCSEG00000021403) #34	ENSCSEG00000021358	rps8a (ENSCSEG00000021357)	hectd3 (ENSCSEG00000021356)	ENSCSEG00000021355	ENSCSEG00000021353	ENSCSEG00000021351
Eupercaria	ANCESTRAL SPECIES	24	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00940000177713	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00940000177713	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00980000198608	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Ballan wrasse	MODERN SPECIES	1	PIEZO2 (ENSLBEG00000013534)	ENSLBEG00000013466	mppe1 (ENSLBEG00000013440)	ENSLBEG00000013338	tmem14cb (ENSLBEG00000013262)	MAK (ENSLBEG00000013213)	pak1ip1 (ENSLBEG00000013184)	si:dkey-222f8.3 (ENSLBEG00000013156)	CC2D1B (ENSLBEG00000013100)	ZFYVE9 (ENSLBEG00000012977)	btf3l4 (ENSLBEG00000012946)	txndc12 (ENSLBEG00000012920)	gipc2 (ENSLBEG00000012881) #19	dnajb4 (ENSLBEG00000012862) #21	slc25a24l (ENSLBEG00000012813)	fubp1 (ENSLBEG00000012700) #22	miga1 (ENSLBEG00000012604) #24	usp33 (ENSLBEG00000012513) #25	zzz3 (ENSLBEG00000012413) #26	ak5 (ENSLBEG00000012327) #27	pigk (ENSLBEG00000012279) #28	ST6GALNAC5 (ENSLBEG00000012251) #29	st6galnac3 (ENSLBEG00000012230) #30
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00940000177713	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000156907.p.b.b.a.b
Perciformes	ANCESTRAL SPECIES	5	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00940000177713	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000156907.p.b.b.a.b
Cottioidei	ANCESTRAL SPECIES	22	ENSGT00940000159325	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923
Lumpfish	MODERN SPECIES	8	rab12 (ENSCLMG00005023033)	napgb (ENSCLMG00005023034)	PIEZO2 (ENSCLMG00005023035)	ENSCLMG00005023036	mppe1 (ENSCLMG00005023037)	ENSCLMG00005023039	pak1ip1 (ENSCLMG00005023047)	si:dkey-222f8.3 (ENSCLMG00005023049)	CC2D1B (ENSCLMG00005023051)	ZFYVE9 (ENSCLMG00005023054)	BTF3L4 (ENSCLMG00005023056)	txndc12 (ENSCLMG00005023057)	gipc2 (ENSCLMG00005023058) #19	dnajb4 (ENSCLMG00005023059) #21	slc25a24l (ENSCLMG00005023060)	fubp1 (ENSCLMG00005023062) #22	miga1 (ENSCLMG00005023065) #24	usp33 (ENSCLMG00005023068) #25	ak5 (ENSCLMG00005023074) #27	pigk (ENSCLMG00005023078) #28	ST6GALNAC5 (ENSCLMG00005023083) #29	st6galnac3 (ENSCLMG00005023084) #30	rabggtb (ENSCLMG00005001359) #33	acadm (ENSCLMG00005001402) #34	ENSCLMG00005001506	ENSCLMG00005001569	hectd3 (ENSCLMG00005001628)	RABGGTB (ENSCLMG00005001657) #33	ACADM (ENSCLMG00005001674) #34	foxc1a (ENSCLMG00005001705)	foxf2a (ENSCLMG00005001712)
Stickleback	MODERN SPECIES	2	napgb (ENSGACG00000016631)	PIEZO2 (ENSGACG00000016625)	ENSGACG00000016623	ENSGACG00000016618	mppe1 (ENSGACG00000016612)	ENSGACG00000016605	pak1ip1 (ENSGACG00000016602)	si:dkey-222f8.3 (ENSGACG00000016599)	CC2D1B (ENSGACG00000016597)	ZFYVE9 (ENSGACG00000016595)	btf3l4 (ENSGACG00000016586)	txndc12 (ENSGACG00000016582)	gipc2 (ENSGACG00000016576) #19	dnajb4 (ENSGACG00000016570) #21	slc25a24l (ENSGACG00000016567)	fubp1 (ENSGACG00000016563) #22	miga1 (ENSGACG00000016560) #24	usp33 (ENSGACG00000016551) #25	zzz3 (ENSGACG00000016546) #26	ak5 (ENSGACG00000016538) #27	pigk (ENSGACG00000016533) #28	ST6GALNAC5 (ENSGACG00000016532) #29	st6galnac3 (ENSGACG00000016529) #30	rabggtb (ENSGACG00000016522) #33	acadm (ENSGACG00000016497) #34	rps8a (ENSGACG00000016489)	hectd3 (ENSGACG00000016471)	MYLK4 (ENSGACG00000016469)	foxc1a (ENSGACG00000016468)	foxf2a (ENSGACG00000016466)	irf4a (ENSGACG00000016461)
Perciformes_a	ANCESTRAL SPECIES	17	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00940000177713	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000156907.p.b.b.a.b
Channel bull blenny	MODERN SPECIES	8	napgb (ENSCGOG00000004679)	ENSCGOG00000004489	mppe1 (ENSCGOG00000004471)	MAK (ENSCGOG00000004463)	tmem14cb (ENSCGOG00000004449)	pak1ip1 (ENSCGOG00000004403)	si:dkey-222f8.3 (ENSCGOG00000004401)	CC2D1B (ENSCGOG00000004058)	ZFYVE9 (ENSCGOG00000003764)	btf3l4 (ENSCGOG00000003747)	txndc12 (ENSCGOG00000003740)	ENSCGOG00000003738	gipc2 (ENSCGOG00000003728) #19	dnajb4 (ENSCGOG00000003720) #21	slc25a24l (ENSCGOG00000003712)	fubp1 (ENSCGOG00000003223) #22	miga1 (ENSCGOG00000003198) #24	miga1 (ENSCGOG00000003182) #24	usp33 (ENSCGOG00000002547) #25	zzz3 (ENSCGOG00000002488) #26	ak5 (ENSCGOG00000002394) #27	pigk (ENSCGOG00000002193) #28	ST6GALNAC5 (ENSCGOG00000002173) #29	ENSCGOG00000002170	st6galnac3 (ENSCGOG00000002160) #30	ENSCGOG00000002158	rabggtb (ENSCGOG00000002050) #33	acadm (ENSCGOG00000001759) #34	rps8a (ENSCGOG00000024652)	hectd3 (ENSCGOG00000024641)	BEST4 (ENSCGOG00000024637)
Pike perch	MODERN SPECIES	12	PIEZO2 (ENSSLUG00000001200)	ENSSLUG00000001045	mppe1 (ENSSLUG00000001040)	ENSSLUG00000000978	MAK (ENSSLUG00000000945)	TMEM14C (ENSSLUG00000000940)	pak1ip1 (ENSSLUG00000000937)	si:dkey-222f8.3 (ENSSLUG00000000928)	CC2D1B (ENSSLUG00000000914)	ZFYVE9 (ENSSLUG00000000867)	btf3l4 (ENSSLUG00000000847)	txndc12 (ENSSLUG00000000843)	gipc2 (ENSSLUG00000000836) #19	dnajb4 (ENSSLUG00000000832) #21	slc25a24l (ENSSLUG00000000829)	fubp1 (ENSSLUG00000000806) #22	miga1 (ENSSLUG00000000720) #24	usp33 (ENSSLUG00000000410) #25	zzz3 (ENSSLUG00000000238) #26	ak5 (ENSSLUG00000000205) #27	pigk (ENSSLUG00000000163) #28	ST6GALNAC5 (ENSSLUG00000000143) #29	st6galnac3 (ENSSLUG00000008094) #30	rabggtb (ENSSLUG00000008085) #33	acadm (ENSSLUG00000007692) #34	rps8a (ENSSLUG00000007631)	hectd3 (ENSSLUG00000007437)	BEST4 (ENSSLUG00000007389)	ENSSLUG00000007384	ENSSLUG00000007378	ENSSLUG00000007369
Eupecaria_C	ANCESTRAL SPECIES	26	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00530000063859.a	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.a.a	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	30	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00530000063859.a	ENSGT00940000156581.h.b	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.a.a	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00940000156907.p.b.b.a.b
European seabass	MODERN SPECIES		MTCL1 (ENSDLAG00005026000)	napgb (ENSDLAG00005026005)	ENSDLAG00005026017	ENSDLAG00005032006	ENSDLAG00005026029	ENSDLAG00005026037	ENSDLAG00005026041	ENSDLAG00005026046	ENSDLAG00005026048	CC2D1B (ENSDLAG00005026053)	ZFYVE9 (ENSDLAG00005026070)	BTF3L4 (ENSDLAG00005026073)	txndc12 (ENSDLAG00005028634)	ENSDLAG00005031198 #21	slc25a24l (ENSDLAG00005026079)	fubp1 (ENSDLAG00005026099) #22	miga1 (ENSDLAG00005029505) #24	usp33 (ENSDLAG00005026141) #25	zzz3 (ENSDLAG00005026166) #26	ak5 (ENSDLAG00005026171) #27	pigk (ENSDLAG00005026185) #28	ST6GALNAC5 (ENSDLAG00005026195) #29	st6galnac3 (ENSDLAG00005033454) #30	RABGGTB (ENSDLAG00005026197) #33	ACADM (ENSDLAG00005026198) #34	ENSDLAG00005026203	ENSDLAG00005026216	ENSDLAG00005026221	ENSDLAG00005028999	ENSDLAG00005026226	ENSDLAG00005026229
Large yellow croaker	MODERN SPECIES	1	rab12 (ENSLCRG00005022253)	napgb (ENSLCRG00005022255)	PIEZO2 (ENSLCRG00005022258)	rx2 (ENSLCRG00005022292)	ENSLCRG00005022294	mppe1 (ENSLCRG00005022297)	ENSLCRG00005022299	si:dkey-222f8.3 (ENSLCRG00005022306)	CC2D1B (ENSLCRG00005022313)	ZFYVE9 (ENSLCRG00005022353)	btf3l4 (ENSLCRG00005022382)	txndc12 (ENSLCRG00005022384)	gipc2 (ENSLCRG00005022387) #19	dnajb4 (ENSLCRG00005022389) #21	slc25a24l (ENSLCRG00005022391)	fubp1 (ENSLCRG00005022394) #22	miga1 (ENSLCRG00005022414) #24	usp33 (ENSLCRG00005022587) #25	zzz3 (ENSLCRG00005022748) #26	ak5 (ENSLCRG00005022750) #27	pigk (ENSLCRG00005022751) #28	ST6GALNAC5 (ENSLCRG00005022777) #29	st6galnac3 (ENSLCRG00005022779) #30	rabggtb (ENSLCRG00005022782) #33	acadm (ENSLCRG00005022785) #34	mfsd14a2 (ENSLCRG00005022816)	insra (ENSLCRG00005022862)	arhgef18a (ENSLCRG00005023556)	sppl2 (ENSLCRG00005023570)	ENSLCRG00005023631	ENSLCRG00005023633
Gilthead seabream	MODERN SPECIES	13	napgb (ENSSAUG00010011035)	PIEZO2 (ENSSAUG00010010897)	ENSSAUG00010010858	mppe1 (ENSSAUG00010010855)	MAK (ENSSAUG00010010851)	tmem14cb (ENSSAUG00010010849)	pak1ip1 (ENSSAUG00010010847)	si:dkey-222f8.3 (ENSSAUG00010010844)	CC2D1B (ENSSAUG00010010833)	ZFYVE9 (ENSSAUG00010010310)	ENSSAUG00010010284	txndc12 (ENSSAUG00010010213)	gipc2 (ENSSAUG00010010209) #19	dnajb4 (ENSSAUG00010010206) #21	slc25a24l (ENSSAUG00010010204)	fubp1 (ENSSAUG00010004826) #22	miga1 (ENSSAUG00010004656) #24	ENSSAUG00010004650	usp33 (ENSSAUG00010004544) #25	zzz3 (ENSSAUG00010004049) #26	ak5 (ENSSAUG00010003052) #27	pigk (ENSSAUG00010002840) #28	ST6GALNAC5 (ENSSAUG00010002809) #29	ENSSAUG00010002791	st6galnac3 (ENSSAUG00010016244) #30	rabggtb (ENSSAUG00010016241) #33	acadm (ENSSAUG00010016230) #34	ENSSAUG00010016224	rps8a (ENSSAUG00010016222)	ENSSAUG00010016220	hectd3 (ENSSAUG00010016144)
Tetraodontidae	ANCESTRAL SPECIES	110													ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826 #21	ENSGT00940000160043 #22	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00960000188290	ENSGT00940000156907.p.b.b.a.b
Fugu	MODERN SPECIES	14	ltb4r2b (ENSTRUG00000006931)	sdr39u1 (ENSTRUG00000006828)	ENSTRUG00000024326	parp2 (ENSTRUG00000010876)	zgc:66427 (ENSTRUG00000006811)	ENSTRUG00000024232	ENSTRUG00000027218	apol1 (ENSTRUG00000005836)	ENSTRUG00000001402	ttll12 (ENSTRUG00000001886)	TMTC1 (ENSTRUG00000002348)	dpydb (ENSTRUG00000003040)	txndc12 (ENSTRUG00000004185)	gipc2 (ENSTRUG00000004207) #19	dnajb4 (ENSTRUG00000004521) #21	fubp1 (ENSTRUG00000004615) #22	usp33 (ENSTRUG00000005338) #25	zzz3 (ENSTRUG00000023236) #26	ak5 (ENSTRUG00000006453) #27	pigk (ENSTRUG00000006537) #28	st6galnac3 (ENSTRUG00000022977) #30	rabggtb (ENSTRUG00000006929) #33	ENSTRUG00000007246	acadm (ENSTRUG00000007137) #34	rps8a (ENSTRUG00000007267)	hectd3 (ENSTRUG00000007419)	ENSTRUG00000007645	ENSTRUG00000022504	hnrnpc (ENSTRUG00000030090)	ENSTRUG00000030495	ENSTRUG00000027029
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000019655	hsd17b2 (ENSTNIG00000019720)	gpia (ENSTNIG00000019788)	ENSTNIG00000019704	abcg2c (ENSTNIG00000019778)	ENSTNIG00000019779	arpc1a (ENSTNIG00000019780)	arpc1b (ENSTNIG00000019781)	DNAL1 (ENSTNIG00000019602)	spra (ENSTNIG00000019699)	spra (ENSTNIG00000019718)	spra (ENSTNIG00000019712)	pnp4a (ENSTNIG00000019818)	ENSTNIG00000000781	srd5a2a (ENSTNIG00000019827)	ENSTNIG00000019815 #22	RAP1GAP (ENSTNIG00000019473)	ENSTNIG00000019482	ENSTNIG00000019813	ENSTNIG00000019639	ENSTNIG00000019770	ENSTNIG00000019505	ENSTNIG00000019701	TPM4 (ENSTNIG00000019471)	ENSTNIG00000019822	ENSTNIG00000019554	bhmt (ENSTNIG00000019455)	ENSTNIG00000000225	rgs16 (ENSTNIG00000019476)	ENSTNIG00000019688	ENSTNIG00000000680
Tetraodon	MODERN SPECIES	26	ENSTNIG00000006238	zpr1 (ENSTNIG00000001378)	zpr1 (ENSTNIG00000003757)	rpl22 (ENSTNIG00000003756)	ARHGEF10L (ENSTNIG00000012205)	dhrs3b (ENSTNIG00000012204)	ENSTNIG00000012203	ephb2b (ENSTNIG00000012202)	LACTBL1 (ENSTNIG00000012201)	ENSTNIG00000012200	ENSTNIG00000012199	ENSTNIG00000012198	alpl (ENSTNIG00000012197)	gipc2 (ENSTNIG00000006138) #19	dnajb4 (ENSTNIG00000006137) #21	fubp1 (ENSTNIG00000003986) #22	usp33 (ENSTNIG00000003985) #25	ENSTNIG00000006386 #26	ak5 (ENSTNIG00000006387) #27	rabggtb (ENSTNIG00000006384) #33	acadm (ENSTNIG00000006383) #34	rps8a (ENSTNIG00000006382)	hectd3 (ENSTNIG00000006381)	ENSTNIG00000019460	ENSTNIG00000019611	ENSTNIG00000004078	ENSTNIG00000019733	ENSTNIG00000000577	ENSTNIG00000000045	cacnb2b (ENSTNIG00000018655)	tmem236 (ENSTNIG00000018654)
Protacanthopterygii	ANCESTRAL SPECIES	32	ENSGT00940000154456.hb.a.h	ENSGT00940000155569.a.b	ENSGT00390000013236	ENSGT00940000155271.lb	ENSGT00940000156581.h.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000009595.a	ENSGT00940000154290.a.e	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b #19	ENSGT00940000156826.d.a #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.d #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000158429 #34	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00390000014590
Northern pike	MODERN SPECIES	2	ENSELUG00000007405	ENSELUG00000007450	ENSELUG00000007455	tmem14cb (ENSELUG00000007462)	pak1ip1 (ENSELUG00000007485)	si:dkey-222f8.3 (ENSELUG00000007523)	ENSELUG00000007548	CC2D1B (ENSELUG00000000272)	ZFYVE9 (ENSELUG00000007762)	ENSELUG00000031557	btf3l4 (ENSELUG00000007814)	txndc12 (ENSELUG00000007845)	gipc2 (ENSELUG00000028926) #19	dnajb4 (ENSELUG00000007902) #21	slc25a24l (ENSELUG00000007945)	fubp1 (ENSELUG00000007990) #22	ENSELUG00000033895	miga1 (ENSELUG00000008065) #24	usp33 (ENSELUG00000008159) #25	ENSELUG00000032809	zzz3 (ENSELUG00000008185) #26	ENSELUG00000028084	ak5 (ENSELUG00000008212) #27	pigk (ENSELUG00000008234) #28	ST6GALNAC5 (ENSELUG00000008301) #29	ENSELUG00000025636	st6galnac3 (ENSELUG00000031170) #30	ENSELUG00000034370	ENSELUG00000032692	rabggtb (ENSELUG00000011413) #33	acadm (ENSELUG00000011458) #34
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	484													ENSGT00390000003420.a.b.a.b #19	ENSGT00940000156826.d.a #21	ENSGT00940000157207.b	ENSGT00940000160043.e.a #22	ENSGT00390000008565.b #24	ENSGT00940000157311.n #25	ENSGT00390000005307.t #26	ENSGT00940000156273 #28	ENSGT00940000157634.d.h #29	ENSGT00940000159735 #30	ENSGT00950000183128.B.j #33	ENSGT00940000158429 #34	ENSGT00950000183128.B.i.a #33	ENSGT00940000165774	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	578															ENSGT00940000156826.d.a.a #21	ENSGT00940000160043.e.a.a #22
Salmo	ANCESTRAL SPECIES	5	ENSGT00950000182982.A.b.t	ENSGT00940000159325.f	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h.a.b	ENSGT00390000013236.l.b	ENSGT00940000155271.lb.rc.b	ENSGT00940000155271.lb.sc.e.a	ENSGT00940000156581.h.b	ENSGT00390000009595.a	ENSGT00940000154290.a.e.d	ENSGT00940000154296.b.a.c.b	ENSGT00530000063273.a	ENSGT00390000003420.a.b.b #19	ENSGT00390000003420.a.b.a.a #19	ENSGT00940000156826.d.b #21	ENSGT00940000160043.e.a.a #22	ENSGT00940000157311.m #25	ENSGT00390000005307.s.c #26	ENSGT00940000179359.a.b.b.a	ENSGT00940000155917 #27	ENSGT00940000157634.d.g #29	ENSGT00390000018077 #31	ENSGT00390000012433.b.a	ENSGT00980000198608	ENSGT00940000164586.h	ENSGT00940000156207.b.c.a.b.a.a.b	ENSGT00390000006876	ENSGT00940000156470.u.b.c	ENSGT00940000154499.hb.a	ENSGT00940000162889.e	ENSGT00940000155682.g.b.d
River trout	MODERN SPECIES	24	ENSSTUG00000020092	ENSSTUG00000020098	rab12 (ENSSTUG00000020108)	napgb (ENSSTUG00000020141)	PIEZO2 (ENSSTUG00000020337)	MPPE1 (ENSSTUG00000021461)	ENSSTUG00000021478	ENSSTUG00000021545	ENSSTUG00000021567	CC2D1B (ENSSTUG00000021575)	ZFYVE9 (ENSSTUG00000021704)	btf3l4 (ENSSTUG00000023016)	txndc12 (ENSSTUG00000023044)	gipc2 (ENSSTUG00000023081) #19	ENSSTUG00000023101 #21	fubp1 (ENSSTUG00000023115) #22	usp33 (ENSSTUG00000023349) #25	ENSSTUG00000028997	ak5 (ENSSTUG00000029004) #27	ENSSTUG00000029022	ENSSTUG00000029026 #31	RPS8 (ENSSTUG00000029034)	ENSSTUG00000029069	ENSSTUG00000029075	znf414 (ENSSTUG00000029086)	csnk1g2a (ENSSTUG00000029110)	ENSSTUG00000029249	rnf2 (ENSSTUG00000029265)	ENSSTUG00000029311	ENSSTUG00000029369	ENSSTUG00000029603
Atlantic salmon	MODERN SPECIES	22	napgb (ENSSSAG00000051527)	ENSSSAG00000111191	ENSSSAG00000111465	ENSSSAG00000118040	ENSSSAG00000101093	ENSSSAG00000099413	ENSSSAG00000094171	ENSSSAG00000115104	ENSSSAG00000051415	CC2D1B (ENSSSAG00000098492)	ZFYVE9 (ENSSSAG00000114821)	BTF3L4 (ENSSSAG00000086107)	TXNDC12 (ENSSSAG00000041172)	dnajb4 (ENSSSAG00000083840) #19	ENSSSAG00000109995	ENSSSAG00000041353 #22	usp33 (ENSSSAG00000047786) #25	ENSSSAG00000119252	zzz3 (ENSSSAG00000051366) #26	ENSSSAG00000085158	ak5 (ENSSSAG00000040615) #27	ST6GALNAC5 (ENSSSAG00000095398) #29	asb17 (ENSSSAG00000040559) #31	ENSSSAG00000040409	ENSSSAG00000006614	ENSSSAG00000040149	ENSSSAG00000119148	ENSSSAG00000116905	ENSSSAG00000120550	ENSSSAG00000111630	ENSSSAG00000039787
Oncorhynchus	ANCESTRAL SPECIES	473															ENSGT00940000156826.d.a.a #21	ENSGT00940000160043.e.a.a #22
Oncorhynchus_a	ANCESTRAL SPECIES	620															ENSGT00940000156826.d.a.a #21	ENSGT00940000160043.e.a.a #22
Coho salmon	MODERN SPECIES	19	rab12 (ENSOKIG00005044799)	napgb (ENSOKIG00005044509)	ENSOKIG00005044486	PIEZO2 (ENSOKIG00005043062)	ENSOKIG00005042823	ENSOKIG00005042788	MPPE1 (ENSOKIG00005042770)	ENSOKIG00005042113	ENSOKIG00005042016	CC2D1B (ENSOKIG00005041948)	ZFYVE9 (ENSOKIG00005041515)	BTF3L4 (ENSOKIG00005041422)	txndc12 (ENSOKIG00005041344)	GIPC2 (ENSOKIG00005041282) #19	dnajb4 (ENSOKIG00005041250) #21	fubp1 (ENSOKIG00005041087) #22	ENSOKIG00005041062	usp33 (ENSOKIG00005039039) #25	zzz3 (ENSOKIG00005038810) #26	ENSOKIG00005038792	ak5 (ENSOKIG00005038771) #27	ENSOKIG00005038765 #31	RPS8 (ENSOKIG00005038747)	ENSOKIG00005038733	znf414 (ENSOKIG00005038725)	ENSOKIG00005038716	CSNK1G2 (ENSOKIG00005038560)	ENSOKIG00005038513	ENSOKIG00005038280	ENSOKIG00005038131	COL6A1 (ENSOKIG00005038026)
Salmoninae_a	ANCESTRAL SPECIES	51	ENSGT00950000182982.A.b.s.a.a	ENSGT00940000159325.e	ENSGT00940000154456.hb.a.h.a.a	ENSGT00940000155569.a.b	ENSGT00390000013236.l.a	ENSGT00940000155271.lb.sc.e.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000005182.k	ENSGT00940000154290.a.e.c	ENSGT00940000154296.b.a.c.a	ENSGT00390000003420.a.b.a.b #19	ENSGT00940000156826.d.a.b #21	ENSGT00940000157207.b	ENSGT00940000160043.e.a.b #22	ENSGT00390000008565.b #24	ENSGT00940000157311.n #25	ENSGT00390000005307.t #26	ENSGT00940000156273 #28	ENSGT00940000157634.d.h #29	ENSGT00940000159735 #30	ENSGT00950000183128.B.j #33	ENSGT00940000158429 #34	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00940000156207.b.c.a.b.a.a.a
Oncorhynchus	ANCESTRAL SPECIES	46	ENSGT00940000166845.c.b.b	ENSGT00950000182982.A.b.s.a.a	ENSGT00940000159325.e	ENSGT00940000154456.hb.a.h.a.a	ENSGT00940000155569.a.b	ENSGT00390000013236.l.a	ENSGT00940000155271.lb.sc.e.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000005182.k	ENSGT00940000154290.a.e.c	ENSGT00390000003420.a.b.a.b #19	ENSGT00940000156826.d.a.b #21	ENSGT00940000157207.b	ENSGT00940000160043.e.a.b #22	ENSGT00390000008565.b #24	ENSGT00940000157311.n #25	ENSGT00390000005307.t #26	ENSGT00940000156273 #28	ENSGT00940000157634.d.h #29	ENSGT00940000159735 #30	ENSGT00950000183128.B.j #33	ENSGT00940000158429 #34	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00940000156207.b.c.a.b.a.a.a
Rainbow trout	MODERN SPECIES	29	ENSOMYG00000065424	ENSOMYG00000008524	ENSOMYG00000008464	ENSOMYG00000051154	ENSOMYG00000064987	ENSOMYG00000052950	ENSOMYG00000072331	ENSOMYG00000065913	ENSOMYG00000073618	ENSOMYG00000008251	ENSOMYG00000049051	gipc2 (ENSOMYG00000067958) #19	ENSOMYG00000069816	ENSOMYG00000006982 #21	slc25a24l (ENSOMYG00000007129)	fubp1 (ENSOMYG00000007341) #22	ENSOMYG00000056346	miga1 (ENSOMYG00000007463) #24	usp33 (ENSOMYG00000007489) #25	ENSOMYG00000057694	zzz3 (ENSOMYG00000007537) #26	pigk (ENSOMYG00000035170) #28	ENSOMYG00000064387	ST6GALNAC5 (ENSOMYG00000077698) #29	ENSOMYG00000049385	ENSOMYG00000071711	prrx1a (ENSOMYG00000067625)	mfsd12a (ENSOMYG00000008716)	csnk1g2a (ENSOMYG00000069481)	ENSOMYG00000065728	mknk2a (ENSOMYG00000008832)
Oncorhynchus_a	ANCESTRAL SPECIES	172			ENSGT00950000182982.A.b.s.a.a	ENSGT00940000154456.hb.a.h.a.a	ENSGT00940000155569.a.b	ENSGT00390000013236.l.a	ENSGT00940000155271.lb.sc.e.b	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000005182.k	ENSGT00940000154290.a.e.c	ENSGT00390000003420.a.b.a.b #19	ENSGT00940000156826.d.a.b #21	ENSGT00940000157207.b	ENSGT00940000160043.e.a.b #22	ENSGT00390000008565.b #24	ENSGT00940000157311.n #25	ENSGT00390000005307.t #26
Coho salmon	MODERN SPECIES	23	MTCL1 (ENSOKIG00005029263)	PIEZO2 (ENSOKIG00005028748)	ENSOKIG00005028666	ENSOKIG00005028649	ENSOKIG00005028005	ENSOKIG00005027957	ENSOKIG00005027943	pak1ip1 (ENSOKIG00005027905)	ENSOKIG00005027891	si:dkey-222f8.3 (ENSOKIG00005027870)	ENSOKIG00005027580	ENSOKIG00005027552	gipc2 (ENSOKIG00005027522) #19	DNAJB4 (ENSOKIG00005027494) #21	slc25a24l (ENSOKIG00005027441)	fubp1 (ENSOKIG00005026463) #22	miga1 (ENSOKIG00005026205) #24	usp33 (ENSOKIG00005026075) #25	zzz3 (ENSOKIG00005025988) #26	clul1 (ENSOKIG00005025970)	ENSOKIG00005025967	ENSOKIG00005025793	ENSOKIG00005048345	stam (ENSOKIG00005048283)	tmem236 (ENSOKIG00005048269)	ENSOKIG00005048266	ENSOKIG00005048262	ENSOKIG00005048254	ENSOKIG00005048251	ENSOKIG00005048244	ENSOKIG00005048240
Chinook salmon	MODERN SPECIES	413														dnajb4 (ENSOTSG00005025263) #21	slc25a24l (ENSOTSG00005025273)	fubp1 (ENSOTSG00005025277) #22	miga1 (ENSOTSG00005025388) #24
Salmo	ANCESTRAL SPECIES	21	ENSGT00940000166845.c.b.b	ENSGT00940000159325.e	ENSGT00940000154456.hb.a.h.a.a	ENSGT00940000155569.a.b	ENSGT00390000013236.l.a	ENSGT00940000155271.lb.rc.a	ENSGT00940000154772.a.a	ENSGT00390000001263	ENSGT00530000063825.A.c.e	ENSGT00390000005182.k	ENSGT00940000154290.a.e.c	ENSGT00940000154296.b.a.c.a	ENSGT00390000003420.a.b.a.b #19	ENSGT00940000156826.d.a.b #21	ENSGT00940000157207.b	ENSGT00940000160043.e.a.b #22	ENSGT00390000008565.b.w #24	ENSGT00940000157311.n #25	ENSGT00390000005307.t #26	ENSGT00940000156273.db #28	ENSGT00940000157634.d.h.b #29	ENSGT00940000156273.eb #28	ENSGT00940000157634.d.h.a #29	ENSGT00940000159735 #30	ENSGT00940000158429 #34	ENSGT00950000183128.B.i.a #33	ENSGT00940000165774	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000094189	ENSSSAG00000091592	ENSSSAG00000005903	ENSSSAG00000052122	ENSSSAG00000099904	ENSSSAG00000066060	ENSSSAG00000092889	ENSSSAG00000004575	ENSSSAG00000004590	ENSSSAG00000004608	ENSSSAG00000007619	gipc2 (ENSSSAG00000118160) #19	ENSSSAG00000097128 #21	ENSSSAG00000087565	slc25a24l (ENSSSAG00000043252)	fubp1 (ENSSSAG00000032861) #22	ENSSSAG00000101262	usp33 (ENSSSAG00000101623) #25	ENSSSAG00000116330	zzz3 (ENSSSAG00000094968) #26	pigk (ENSSSAG00000115850) #28	ST6GALNAC5 (ENSSSAG00000093729) #29	oprk1 (ENSSSAG00000089257)	ENSSSAG00000012543	bag1 (ENSSSAG00000095448)	vath (ENSSSAG00000115585)	ENSSSAG00000102794	ENSSSAG00000121553	ENSSSAG00000006077	ENSSSAG00000006051	pecr (ENSSSAG00000006003)
River trout	MODERN SPECIES	13	rab12 (ENSSTUG00000034642)	PIEZO2 (ENSSTUG00000034706)	ENSSTUG00000036762	ENSSTUG00000036792	ENSSTUG00000036807	tmem14cb (ENSSTUG00000036816)	pak1ip1 (ENSSTUG00000036836)	si:dkey-222f8.3 (ENSSTUG00000036887)	ENSSTUG00000036901	ENSSTUG00000036935	ENSSTUG00000037049	btf3l4 (ENSSTUG00000037514)	GIPC2 (ENSSTUG00000037530) #19	dnajb4 (ENSSTUG00000037568) #21	slc25a24l (ENSSTUG00000037576)	fubp1 (ENSSTUG00000037620) #22	miga1 (ENSSTUG00000038345) #24	usp33 (ENSSTUG00000038591) #25	zzz3 (ENSSTUG00000041401) #26	pigk (ENSSTUG00000041830) #28	ST6GALNAC5 (ENSSTUG00000002635) #29	st6galnac3 (ENSSTUG00000002717) #30	ENSSTUG00000002728	ENSSTUG00000002732	rabggtb (ENSSTUG00000002745) #33	acadm (ENSSTUG00000002833) #34	RPS8 (ENSSTUG00000004036)	hectd3 (ENSSTUG00000004172)	BEST4 (ENSSTUG00000004766)	ndc1 (ENSSTUG00000004812)	zgc:113691 (ENSSTUG00000005725)
Huchen	MODERN SPECIES	7480															ENSHHUG00000003209 #22	ENSHHUG00000003202 #22
Salmoninae	ANCESTRAL SPECIES	728										ENSGT00390000009595.a	ENSGT00940000154290.a.e.d	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT00390000003420.a.b.a.a #19	ENSGT00940000156826.d.b #21	ENSGT00940000160043.e.b #22	ENSGT00940000157311.m #25	ENSGT00390000005307.s #26	ENSGT00940000155917 #27	ENSGT00940000157634.d.g #29
Huchen	MODERN SPECIES	3463													mab21l2 (ENSHHUG00000011321)	ENSHHUG00000011274	ENSHHUG00000011261	fubp1 (ENSHHUG00000011255) #22	ENSHHUG00000011248 #22
Salmoninae_a	ANCESTRAL SPECIES	227														ENSGT00390000003420.a.b.a.a #19	ENSGT00940000156826.d.b #21	ENSGT00940000160043.e.b #22	ENSGT00940000157311.m #25	ENSGT00390000005307.s.c #26	ENSGT00940000155917 #27	ENSGT00940000157634.d.g #29
Oncorhynchus	ANCESTRAL SPECIES	15	ENSGT00390000017580.e.b	ENSGT00940000166845.c.b.a	ENSGT00950000182982.A.b.t	ENSGT00940000159325.f	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h.a.b	ENSGT00390000013236.l.b	ENSGT00940000155271.lb.sc.e.a	ENSGT00940000156581.h.b	ENSGT00390000009595.a	ENSGT00940000154290.a.e.d	ENSGT00940000154296.b.a.c.b	ENSGT00530000063273.a	ENSGT00390000003420.a.b.a.a #19	ENSGT00940000156826.d.b #21	ENSGT00940000160043.e.b #22	ENSGT00940000157311.m #25	ENSGT00390000005307.s.c #26	ENSGT00940000155917 #27	ENSGT00940000157634.d.g #29	ENSGT00390000018077 #31	ENSGT00390000012433.b.a	ENSGT00940000164586.h	ENSGT00940000156207.b.c.a.b.a.a.b	ENSGT00390000006876	ENSGT00940000156470.u.b.c	ENSGT00940000154499.hb.c.b	ENSGT00940000162889.e.c	ENSGT00940000155682.g.b.d	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	123	ENSGT00390000017580.e.b	ENSGT00940000166845.c.b.a	ENSGT00950000182982.A.b.t	ENSGT00940000159325.f	ENSGT00390000005826.b.f	ENSGT00940000154456.hb.a.h.a.b	ENSGT00390000013236.l.b	ENSGT00940000155271.lb.sc.e.a	ENSGT00940000156581.h.b	ENSGT00390000009595.a	ENSGT00940000154290.a.e.d	ENSGT00940000154296.b.a.d	ENSGT00530000063273.a	ENSGT00390000003420.a.b.a.a #19	ENSGT00940000156826.d.b #21	ENSGT00940000160043.e.b #22	ENSGT00940000157311.m #25	ENSGT00390000005307.s.c #26	ENSGT00940000155917 #27	ENSGT00390000018077 #31	ENSGT00390000012433.b.a	ENSGT00940000164586.h	ENSGT00940000156207.b.c.a.b.a.a.b	ENSGT00390000006876	ENSGT00940000156470.u.b.c	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.a.a	ENSGT00390000004859.c.b	ENSGT00940000160141.e.a	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00940000157362.c
Chinook salmon	MODERN SPECIES	20	zgc:171772 (ENSOTSG00005037562)	ENSOTSG00005037560	ENSOTSG00005037559	csnk1g2a (ENSOTSG00005037558)	ENSOTSG00005037556	znf414 (ENSOTSG00005037554)	ENSOTSG00005037553	ENSOTSG00005037550	RPS8 (ENSOTSG00005037546)	ENSOTSG00005037544	ENSOTSG00005037543	ENSOTSG00005037540	txndc12 (ENSOTSG00005037538)	gipc2 (ENSOTSG00005037531) #19	ENSOTSG00005037530 #21	fubp1 (ENSOTSG00005037529) #22	usp33 (ENSOTSG00005037527) #25	ENSOTSG00005037526 #26	ak5 (ENSOTSG00005037523) #27	ENSOTSG00005037522	CC2D1B (ENSOTSG00005037514)	ENSOTSG00005037511	ENSOTSG00005037510	ENSOTSG00005037508	crygn1 (ENSOTSG00005037506)	OLFM3 (ENSOTSG00005037505)	mplkip (ENSOTSG00005037408)	ENSOTSG00005037402	zgc:55781 (ENSOTSG00005037399)	fbxl7 (ENSOTSG00005037397)	impa1 (ENSOTSG00005037393)
Rainbow trout	MODERN SPECIES	20	napgb (ENSOMYG00000054932)	ENSOMYG00000058354	ENSOMYG00000036181	ENSOMYG00000036156	ENSOMYG00000069134	ENSOMYG00000070469	ENSOMYG00000020727	CC2D1B (ENSOMYG00000020754)	ZFYVE9 (ENSOMYG00000020907)	BTF3L4 (ENSOMYG00000021825)	txndc12 (ENSOMYG00000021790)	GIPC2 (ENSOMYG00000056475) #19	ENSOMYG00000048819	ENSOMYG00000049005	dnajb4 (ENSOMYG00000021742) #21	fubp1 (ENSOMYG00000021711) #22	ENSOMYG00000074374	usp33 (ENSOMYG00000077675) #25	zzz3 (ENSOMYG00000074445) #26	ak5 (ENSOMYG00000051361) #27	ST6GALNAC5 (ENSOMYG00000025570) #29	ENSOMYG00000072302	ENSOMYG00000054633	ENSOMYG00000050220 #31	ENSOMYG00000021849	ENSOMYG00000021887	ENSOMYG00000021899	ENSOMYG00000021908	ENSOMYG00000021939	ENSOMYG00000021958	ENSOMYG00000059876
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000160043.f #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	7480															ENSHHUG00000003202 #22	ENSHHUG00000003209 #22
Huchen	MODERN SPECIES	3463												mab21l2 (ENSHHUG00000011321)	ENSHHUG00000011274	ENSHHUG00000011261	fubp1 (ENSHHUG00000011255) #22	ENSHHUG00000011248 #22
Osteoglossiformes	ANCESTRAL SPECIES	30	ENSGT00940000153665.b.a.b	ENSGT00940000155505.a	ENSGT00390000008086.a	ENSGT01030000235901	ENSGT01050000244838.H.d.c	ENSGT00950000183104.A.a.a	ENSGT00390000009595.a	ENSGT00940000154290.a	ENSGT00940000154296.b.a	ENSGT00530000063273.a	ENSGT01030000234559.a.b #16	ENSGT00390000003420.a.b #19	ENSGT00940000177713	ENSGT00940000156826 #21	ENSGT00940000157207.b	ENSGT00940000160043 #22	ENSGT00730000111176 #23	ENSGT00390000008565.b #24	ENSGT00940000157311 #25	ENSGT00390000005307 #26	ENSGT00940000155917 #27	ENSGT00940000156273 #28	ENSGT00940000157634.c #29	ENSGT00940000159735 #30	ENSGT00950000183128.B #33	ENSGT00940000165774	ENSGT00990000210457	ENSGT00940000156600.e #35	ENSGT00940000156200.A #36	ENSGT00940000153304.C	ENSGT00940000154882
Asian bonytongue	MODERN SPECIES	18	pif1 (ENSSFOG00015010746)	uqcrh (ENSSFOG00015010735)	nsun4 (ENSSFOG00015010712)	dmbx1b (ENSSFOG00015027422)	ENSSFOG00015033136	elovl1a (ENSSFOG00015010575)	cdc20 (ENSSFOG00015010524)	CC2D1B (ENSSFOG00015010499)	ZFYVE9 (ENSSFOG00015010452)	btf3l4 (ENSSFOG00015010433)	txndc12 (ENSSFOG00015031337)	ptgfr (ENSSFOG00015010365) #16	gipc2 (ENSSFOG00015027315) #19	dnajb4 (ENSSFOG00015026310) #21	slc25a24l (ENSSFOG00015010286)	fubp1 (ENSSFOG00015010213) #22	nexn (ENSSFOG00015010131) #23	miga1 (ENSSFOG00015010056) #24	usp33 (ENSSFOG00015009897) #25	zzz3 (ENSSFOG00015009847) #26	ak5 (ENSSFOG00015009781) #27	pigk (ENSSFOG00015009759) #28	st6galnac5b (ENSSFOG00015009736) #29	st6galnac3 (ENSSFOG00015009710) #30	rabggtb (ENSSFOG00015009683) #33	ENSSFOG00015028236	acadm (ENSSFOG00015021946) #34	SLC44A5 (ENSSFOG00015021889) #35	lhx8a (ENSSFOG00015021856) #36	tyw3 (ENSSFOG00015031668)	cryz (ENSSFOG00015021815)
Spotted gar	MODERN SPECIES	648	nsun4 (ENSLOCG00000004075)	ENSLOCG00000004038	dmbx1b (ENSLOCG00000004020)	mknk1 (ENSLOCG00000003998)	mob3c (ENSLOCG00000003969)	elovl1a (ENSLOCG00000003952)	cdc20 (ENSLOCG00000003921)	CC2D1B (ENSLOCG00000003904)	ZFYVE9 (ENSLOCG00000003886)	btf3l4 (ENSLOCG00000003871)	txndc12 (ENSLOCG00000003852)	ptgfr (ENSLOCG00000003835) #16	gipc2 (ENSLOCG00000003819) #19	dnajb4 (ENSLOCG00000003800) #21	slc25a24l (ENSLOCG00000003781)	fubp1 (ENSLOCG00000003745) #22	nexn (ENSLOCG00000003732) #23	miga1 (ENSLOCG00000003715) #24	usp33 (ENSLOCG00000003680) #25	zzz3 (ENSLOCG00000003656) #26	ak5 (ENSLOCG00000003639) #27	pigk (ENSLOCG00000003605) #28	st6galnac5b (ENSLOCG00000003568) #29	st6galnac3 (ENSLOCG00000003555) #30	ASB17 (ENSLOCG00000003541) #31	rabggtb (ENSLOCG00000003528) #33	acadm (ENSLOCG00000003500) #34	SLC44A5 (ENSLOCG00000003464) #35	lhx8a (ENSLOCG00000003447) #36	tyw3 (ENSLOCG00000003437)	cryz (ENSLOCG00000003420)
Reedfish	MODERN SPECIES	1	ENSECRG00000017021	ENSECRG00000006218	OLFML2B (ENSECRG00000006233)	ENSECRG00000006250	dusp12 (ENSECRG00000006278)	rxrgb (ENSECRG00000006312)	LMX1A (ENSECRG00000006392)	ENSECRG00000006560	sele (ENSECRG00000006663)	si:dkey-51e6.1 (ENSECRG00000006688)	txndc12 (ENSECRG00000006696)	ptgfr (ENSECRG00000006708) #16	gipc2 (ENSECRG00000006713) #19	dnajb4 (ENSECRG00000006724) #21	slc25a24l (ENSECRG00000006740)	fubp1 (ENSECRG00000006765) #22	nexn (ENSECRG00000006839) #23	miga1 (ENSECRG00000006869) #24	usp33 (ENSECRG00000006887) #25	ak5 (ENSECRG00000006904) #27	pigk (ENSECRG00000006924) #28	st6galnac5b (ENSECRG00000006947) #29	st6galnac3 (ENSECRG00000006962) #30	rabggtb (ENSECRG00000006975) #33	acadm (ENSECRG00000007019) #34	SLC44A5 (ENSECRG00000007174) #35	lhx8a (ENSECRG00000007242) #36	tyw3 (ENSECRG00000007279)	cryz (ENSECRG00000007292)	erich3 (ENSECRG00000007311)	tnni3k (ENSECRG00000007372)