Euteleostomi ANCESTRAL SPECIES 1088 ENSGT00940000161868 #22 ENSGT00940000161976 #23 Sarcopterygii ANCESTRAL SPECIES 946 ENSGT00940000161868 #22 ENSGT00940000161976 #23 Tetrapoda ANCESTRAL SPECIES 61 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00940000155061.b ENSGT00950000182943 #31 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000158973.b ENSGT00940000158444 ENSGT00940000166166 ENSGT00950000182926.b.c ENSGT01100000266316 ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 Amniota ANCESTRAL SPECIES 57 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00950000182943.kb.a ##31 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 Mammalia ANCESTRAL SPECIES 67 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000017613 ENSGT00390000009488 ENSGT00940000159305 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000154390.A.j ENSGT00940000160915 ENSGT00940000156732 ENSGT00950000182926.b.c ENSGT00940000158490 Theria ANCESTRAL SPECIES 13 ENSGT00940000156588 ENSGT00510000048998 ENSGT00940000161244 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153924 ENSGT00940000153770.s.b ENSGT00940000154869.b.b #21 ENSGT00940000153094 ENSGT00940000154869.b.a.b ##21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000154390.A.j ENSGT00940000160915 ENSGT00940000156732 ENSGT00950000182926.b.c Eutheria ANCESTRAL SPECIES 2 ENSGT00510000048998 ENSGT00940000162565 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000164053 ENSGT00940000153770.s.b.b ENSGT00940000153924 ENSGT00940000153770.s.b.a.a ENSGT00940000154413 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000164409 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000154279 ENSGT00940000153924 ENSGT00940000163546 ENSGT00940000153770.s.b.b ENSGT00940000154413 ENSGT00940000153770.s.b.a.a ENSGT00940000162515 ENSGT00940000154039.a.a.a ENSGT00940000154869.b.b #21 ENSGT00940000153770.s.b.a.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000154279 ENSGT00940000153924.n ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A ENSGT00940000154039.a.a.a.i.b ENSGT00940000154869.b.b #21 ENSGT00940000153770.s.b.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Primates ANCESTRAL SPECIES 14 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000153048.B.c.b.a.a.a ENSGT00940000154413 ENSGT00940000162421 ENSGT00940000154279 ENSGT00940000153924.n ENSGT00940000153770.s.b.a.a.fb ENSGT00940000162515 ENSGT00940000154039.a.a.a.j ENSGT00940000153048.B.d ENSGT00940000154039.a.a.a.i.b.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Haplorrhini ANCESTRAL SPECIES 15 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000154039.a.a.a.j.a.b.a ENSGT00940000154039.a.a.b ENSGT00940000153770.s.b.a.a.fb ENSGT00940000162515 ENSGT00940000154279.b ENSGT00940000153770.s.b.a.a.eb.a ENSGT00940000154039.a.a.a.i.b.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000154039.a.a.a.j.a.b.b.a ENSGT00940000162421.c.a ENSGT00940000153048.B.c.b.a.a.a.a ENSGT00940000154413.a ENSGT00940000153770.s.b.a.a.fb.f ENSGT00940000162515.p.b ENSGT00940000154039.a.a.a.i.a.a ENSGT00940000163554.a ENSGT00940000164789 ENSGT00940000154039.a.a.b.a.a ENSGT00940000153770.s.b.a.a.fb.e.a ENSGT00940000153924.n ENSGT00940000163546 ENSGT00940000154039.a.a.a.i.b.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Platyrrhini ANCESTRAL SPECIES 13 ENSGT00940000154279.b ENSGT00940000162515.p.a.a.a.b ENSGT00940000154279.a.a ENSGT00940000162515.p.a.a.a.a ENSGT00940000154039.a.a.a.j.a.b.b.a ENSGT00940000153048.B.d ENSGT00940000162515.p.a.b ENSGT00940000162421.c.a ENSGT00940000153770.s.b.a.a.fb.f ENSGT00940000154413.b.b.b ENSGT00940000154039.a.a.a.j.a.b.b.b ENSGT00940000153770.s.b.a.a.fb.e.b ENSGT00940000162421.c.b ENSGT00940000154039.a.a.a.j.a.b.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Mas night monkey MODERN SPECIES 733 ENSANAG00000026173 #21 PAX8 (ENSANAG00000022412) #22 PSD4 (ENSANAG00000021945) #23 IL1RN (ENSANAG00000026822) #24 IL1F10 (ENSANAG00000025373) #25 IL36RN (ENSANAG00000026021) #26 IL36B (ENSANAG00000028702) #27 IL36A (ENSANAG00000027359) #28 IL36G (ENSANAG00000034903) #29 ENSANAG00000018509 #30 IL37 (ENSANAG00000027073) #31 Cebidae ANCESTRAL SPECIES 15 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000164053 ENSGT00840000130051 ENSGT00940000153770.s.b.a.b ENSGT00940000154413.b.a.a ENSGT00940000153048.B.c.b.b ENSGT00940000153770.s.b.b ENSGT00940000162515.p.a.a.b ENSGT00940000154039.a.a.a.j.b ENSGT00940000154279.b ENSGT00940000154413.b.a.b.b ENSGT00940000154039.a.a.a.j.a.b.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Cebidae_a ANCESTRAL SPECIES 148 ENSGT00940000153048.B.c.a.a.a.b.a ENSGT00940000153048.B.c.a.a.a.b.b ENSGT00940000154039.a.a.a.j.a.b.b.b ENSGT00940000153770.s.b.a.a.fb.e.b.c ENSGT00940000162421.c.b ENSGT00940000154039.a.a.a.j.a.b.a ENSGT00940000161868 #22 Bolivian squirrel monkey MODERN SPECIES 202 ENSSBOG00000023802 ENSSBOG00000006409 ENSSBOG00000036410 IGKV1-27 (ENSSBOG00000036367) ENSSBOG00000036416 ENSSBOG00000024742 ENSSBOG00000036338 ENSSBOG00000018168 ENSSBOG00000011836 ENSSBOG00000024045 ENSSBOG00000011195 ENSSBOG00000011471 ENSSBOG00000027847 IGKV1OR2-108 (ENSSBOG00000016583) ENSSBOG00000010002 PAX8 (ENSSBOG00000020944) #22 PSD4 (ENSSBOG00000034213) #23 IL1RN (ENSSBOG00000008003) #24 IL1F10 (ENSSBOG00000029452) #25 IL36RN (ENSSBOG00000027124) #26 IL36B (ENSSBOG00000029500) #27 IL36A (ENSSBOG00000011854) #28 IL36G (ENSSBOG00000033457) #29 IL1B (ENSSBOG00000030165) ##31 IL37 (ENSSBOG00000003781) #31 IL1A (ENSSBOG00000032234) CKAP2L (ENSSBOG00000031307) SLC20A1 (ENSSBOG00000000487) CHCHD5 (ENSSBOG00000023806) POLR1B (ENSSBOG00000024562) ENSSBOG00000035023 Marmoset MODERN SPECIES 5 ENSCJAG00000047227 ENSCJAG00000070260 ENSCJAG00000082416 ENSCJAG00000073327 ENSCJAG00000013875 ENSCJAG00000082042 ENSCJAG00000079247 ENSCJAG00000045663 ENSCJAG00000079012 ENSCJAG00000038358 ENSCJAG00000081439 ENSCJAG00000077077 ENSCJAG00000045659 ENSCJAG00000061975 ENSCJAG00000067272 PAX8 (ENSCJAG00000013889) #22 PSD4 (ENSCJAG00000013912) #23 ENSCJAG00000085424 #24 IL1F10 (ENSCJAG00000041166) #25 IL36RN (ENSCJAG00000036307) #26 ENSCJAG00000077528 #27 IL36A (ENSCJAG00000040165) #28 IL36G (ENSCJAG00000052620) #29 ENSCJAG00000066488 ENSCJAG00000075908 ENSCJAG00000072213 ENSCJAG00000072414 ENSCJAG00000000895 ENSCJAG00000075175 BCL2L11 (ENSCJAG00000004445) ENSCJAG00000059097 Catarrhini ANCESTRAL SPECIES 17 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000162421.d ENSGT00940000154413.b.b.a.b.b ENSGT00940000164053 ENSGT00840000130051 ENSGT00940000153770.s.b.a.b ENSGT00940000154279.b.j ENSGT00940000154413.b.b.b ENSGT00940000163264.B ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Cercopithecidae ANCESTRAL SPECIES 32 ENSGT00940000164789 ENSGT00940000154039.a.a.b.a.a.d ENSGT00940000153770.s.b.a.a.fb.e.a ENSGT00940000162421.c.b.b ENSGT00940000153770.s.b.a.a.fb.e.b.b ENSGT00940000154039.a.a.b.a.b ENSGT00940000153048.B.c.b.a.b ENSGT00940000162421.c.a ENSGT00940000153770.s.b.a.a.eb.b ENSGT00940000162421.c.b.a ENSGT00940000154279.b.i.a ENSGT00940000153048.A ENSGT00940000154039.a.a.a.i.b.b.b.b ENSGT00940000163264.B ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000153770.s.b.a.a.fb.f.c.a ENSGT00940000164789.c.a ENSGT00940000154039.a.a.b.a.a.d ENSGT00940000153770.s.b.a.a.fb.e.a ENSGT00940000162421.c.b.b ENSGT00940000153770.s.b.a.a.fb.e.b.b ENSGT00940000154039.a.a.b.a.b ENSGT00940000162421.c.a ENSGT00940000153770.s.b.a.a.eb.b ENSGT00940000162421.c.b.a ENSGT00940000154279.b.i.a ENSGT00940000153048.A ENSGT00940000154039.a.a.a.i.b.b.b.b ENSGT00940000163264.B ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000164053.b ENSGT00940000162421.d ENSGT00940000154413.b.b.a.b.b ENSGT00940000164053.a ENSGT00840000130051 ENSGT00940000153770.s.b.a.b ENSGT00940000154039.a.a.b.b.b ENSGT00940000153048.B.c.b.a.a.a.a.a.a.b.d.b ENSGT00940000153048.B.c.b.a.a.b.a.a ENSGT00940000153048.B.c.b.a.a.a.a.b.b.a.a ENSGT00940000154413.a.b.a.b ENSGT00940000163264.A.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00950000183010.a.a.a.b.b.a.a.a ENSGT00390000007919 Cercopithecinae_b ANCESTRAL SPECIES 40 ENSGT00940000154869.b.b #21 ENSGT00940000154039.a.a.a.i.b.a.a ENSGT00940000153770.s.b.a.a.fb.e.a.a ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00950000183010.a.a.a.b.b.a.a.a ENSGT00390000007919 Olive baboon MODERN SPECIES 5 IGKV1OR2-108 (ENSPANG00000047260) ENSPANG00000040262 ENSPANG00000039554 ENSPANG00000046294 ENSPANG00000040881 ENSPANG00000046106 #21 ENSPANG00000034445 ENSPANG00000048520 ENSPANG00000038477 ENSPANG00000006059 ENSPANG00000043449 ENSPANG00000039557 ENSPANG00000040701 ENSPANG00000042913 ENSPANG00000033234 PAX8 (ENSPANG00000016994) #22 PSD4 (ENSPANG00000025950) #23 IL1RN (ENSPANG00000035959) #24 IL1F10 (ENSPANG00000048250) #25 IL36RN (ENSPANG00000007246) #26 IL36B (ENSPANG00000009535) #27 IL36A (ENSPANG00000019900) #28 IL36G (ENSPANG00000006060) #29 IL37 (ENSPANG00000041156) #31 IL1B (ENSPANG00000000795) ##31 IL1A (ENSPANG00000009536) CKAP2L (ENSPANG00000014227) NT5DC4 (ENSPANG00000033620) SLC20A1 (ENSPANG00000008669) CHCHD5 (ENSPANG00000021721) POLR1B (ENSPANG00000023423) Cercopithecinae_d ANCESTRAL SPECIES 121 ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00950000183010.a.a.a.b.b.a.a.a ENSGT00390000007919 Drill MODERN SPECIES 319 ENSMLEG00000037165 ENSMLEG00000000054 ENSMLEG00000000690 ENSMLEG00000004454 #22 ENSMLEG00000012876 Sooty mangabey MODERN SPECIES 166 ENSCATG00000001528 ENSCATG00000000064 ENSCATG00000002503 ENSCATG00000022761 ENSCATG00000022517 ENSCATG00000037559 ENSCATG00000024685 IGKV1OR2-108 (ENSCATG00000020604) ENSCATG00000030297 ENSCATG00000036888 ENSCATG00000035058 ENSCATG00000037438 ENSCATG00000037517 ENSCATG00000038146 ENSCATG00000036807 PAX8 (ENSCATG00000036605) #22 ENSCATG00000036465 PSD4 (ENSCATG00000043819) #23 IL1RN (ENSCATG00000040482) #24 IL1F10 (ENSCATG00000014084) #25 IL36RN (ENSCATG00000023446) #26 IL36B (ENSCATG00000040042) #27 IL36A (ENSCATG00000023144) #28 IL36G (ENSCATG00000025800) #29 IL37 (ENSCATG00000035192) #31 IL1B (ENSCATG00000032875) ##31 IL1A (ENSCATG00000040848) CKAP2L (ENSCATG00000035303) NT5DC4 (ENSCATG00000036107) SLC20A1 (ENSCATG00000034278) ENSCATG00000021927 Macaca ANCESTRAL SPECIES 28 ENSGT00940000153924.n ENSGT00940000153048.A ENSGT00940000154279.b.i.a.a.a ENSGT00940000162421.c.b.a ENSGT00940000154039.a.a.a.i.b.b.a.a.a ENSGT00940000153048.B.c.a.a.a.d.a.b.a ENSGT00940000154039.a.b.b.a.a.a ENSGT00940000153048.B.c.a.a.a.d.b ENSGT00940000154039.a.b.b.a.a.b ENSGT00940000162421.c.b.b ENSGT00940000153770.s.b.a.a.fb.e.b.b ENSGT00940000154039.a.a.a.i.b.b.b.b ENSGT00940000163264.C ENSGT00940000163264.A.b.b.b.b ENSGT00940000163264.A.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00950000183010.a.a.a.b.b.a.a.a ENSGT00390000007919 Pig-tailed macaque MODERN SPECIES 490 ENSMNEG00000026325 ENSMNEG00000005024 ENSMNEG00000019726 ENSMNEG00000003194 ENSMNEG00000035526 ENSMNEG00000019577 ENSMNEG00000036061 ENSMNEG00000027861 IGKV1OR2-108 (ENSMNEG00000012000) ENSMNEG00000042091 ENSMNEG00000010610 ENSMNEG00000044955 ENSMNEG00000035623 ENSMNEG00000024974 ENSMNEG00000030576 PAX8 (ENSMNEG00000036717) #22 ENSMNEG00000029515 PSD4 (ENSMNEG00000038985) #23 IL1RN (ENSMNEG00000042293) #24 IL1F10 (ENSMNEG00000037729) #25 IL36RN (ENSMNEG00000039528) #26 IL36B (ENSMNEG00000015962) #27 IL36A (ENSMNEG00000039566) #28 IL36G (ENSMNEG00000021970) #29 IL37 (ENSMNEG00000043375) #31 IL1B (ENSMNEG00000040015) ##31 IL1A (ENSMNEG00000040187) CKAP2L (ENSMNEG00000032296) NT5DC4 (ENSMNEG00000041896) SLC20A1 (ENSMNEG00000034900) CHCHD5 (ENSMNEG00000037554) Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000154279.b.i.b.a ENSGT00940000154039.a.a.a.i.b.b.b.a ENSGT00940000153048.B.c.a.a.a.d.a.a ENSGT00940000154039.a.b.b.a.b.b ENSGT00940000154039.a.b.b.b ENSGT00940000153048.B.c.a.a.a.d.a.b.b.b.a.a ENSGT00940000154039.a.a.a.i.b.b.a.a.b ENSGT00940000154039.a.a.b.a.b.b ENSGT00940000154039.a.a.a.i.b.a.b ENSGT00940000154039.a.b.b.a.a.b ENSGT00940000162421.c.b.b ENSGT00940000153770.s.b.a.a.fb.e.b.b ENSGT00940000154039.a.a.a.i.b.b.b.b ENSGT00940000163264.C ENSGT00940000163264.A.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT01100000263493.a.a.a.b.b.b.b.a.b.b.a.b.b.b ENSGT00390000014879.c.a ENSGT00950000183010.a.a.a.b.b.a.a.a Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000052277 ENSMFAG00000047769 ENSMFAG00000038656 ENSMFAG00000040100 ENSMFAG00000037949 ENSMFAG00000056329 ENSMFAG00000057158 ENSMFAG00000057165 ENSMFAG00000043123 ENSMFAG00000043601 ENSMFAG00000052463 ENSMFAG00000054815 ENSMFAG00000050783 ENSMFAG00000050992 ENSMFAG00000002024 PAX8 (ENSMFAG00000000442) #22 PSD4 (ENSMFAG00000040672) #23 IL1RN (ENSMFAG00000031381) #24 IL1F10 (ENSMFAG00000050256) #25 IL36RN (ENSMFAG00000056041) #26 IL36B (ENSMFAG00000031320) #27 IL36A (ENSMFAG00000031039) #28 IL36G (ENSMFAG00000042196) #29 IL37 (ENSMFAG00000044707) #31 IL1B (ENSMFAG00000043064) ##31 IL1A (ENSMFAG00000004069) CKAP2L (ENSMFAG00000028477) ENSMFAG00000056323 NT5DC4 (ENSMFAG00000024760) ENSMFAG00000065424 SLC20A1 (ENSMFAG00000006822) Rhesus MODERN SPECIES 4 ENSMMUG00000041542 ENSMMUG00000043251 ENSMMUG00000053949 ENSMMUG00000048338 ENSMMUG00000059355 ENSMMUG00000062328 ENSMMUG00000059360 ENSMMUG00000030655 ENSMMUG00000064336 ENSMMUG00000050380 ENSMMUG00000053264 ENSMMUG00000056221 ENSMMUG00000049386 ENSMMUG00000008434 ENSMMUG00000053570 PAX8 (ENSMMUG00000011578) #22 PSD4 (ENSMMUG00000011572) #23 IL1RN (ENSMMUG00000013014) #24 IL1F10 (ENSMMUG00000061530) #25 IL36RN (ENSMMUG00000061691) #26 IL36B (ENSMMUG00000064457) #27 IL36A (ENSMMUG00000000988) #28 IL36G (ENSMMUG00000062948) #29 IL37 (ENSMMUG00000005922) #31 IL1B (ENSMMUG00000061716) ##31 IL1A (ENSMMUG00000052787) CKAP2L (ENSMMUG00000019773) NT5DC4 (ENSMMUG00000019770) ENSMMUG00000050951 SLC20A1 (ENSMMUG00000004574) CHCHD5 (ENSMMUG00000007779) Vervet Monkey MODERN SPECIES 5 ENSCSAG00000019432 ENSCSAG00000016573 ENSCSAG00000016574 ENSCSAG00000016578 ENSCSAG00000016580 ENSCSAG00000016582 ENSCSAG00000016586 ENSCSAG00000016587 ENSCSAG00000016593 ENSCSAG00000016597 ENSCSAG00000016600 ENSCSAG00000016606 ENSCSAG00000016611 ENSCSAG00000016620 ENSCSAG00000016662 PAX8 (ENSCSAG00000016682) #22 PSD4 (ENSCSAG00000016690) #23 IL1RN (ENSCSAG00000016706) #24 IL1F10 (ENSCSAG00000016718) #25 IL36RN (ENSCSAG00000016723) #26 IL36B (ENSCSAG00000016731) #27 IL36A (ENSCSAG00000016738) #28 IL36G (ENSCSAG00000016747) #29 IL37 (ENSCSAG00000016752) #31 IL1B (ENSCSAG00000016756) ##31 IL1A (ENSCSAG00000016761) CKAP2L (ENSCSAG00000016767) SLC20A1 (ENSCSAG00000016771) CHCHD5 (ENSCSAG00000016776) POLR1B (ENSCSAG00000016783) TTL (ENSCSAG00000016787) Rhinopithecus ANCESTRAL SPECIES 393 ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a Black snub-nosed monkey MODERN SPECIES 1047 PAX8 (ENSRBIG00000033831) #22 ENSRBIG00000023354 PSD4 (ENSRBIG00000023939) #23 IL1RN (ENSRBIG00000036162) #24 IL1F10 (ENSRBIG00000028191) #25 IL36B (ENSRBIG00000038936) #27 IL36A (ENSRBIG00000042702) #28 IL36G (ENSRBIG00000043587) #29 IL37 (ENSRBIG00000034484) #31 IL1B (ENSRBIG00000032910) ##31 IL1A (ENSRBIG00000041576) CKAP2L (ENSRBIG00000040979) NT5DC4 (ENSRBIG00000033101) SLC20A1 (ENSRBIG00000032048) Golden snub-nosed monkey MODERN SPECIES 1262 PAX8 (ENSRROG00000036666) #22 ENSRROG00000033901 PSD4 (ENSRROG00000031288) #23 IL1RN (ENSRROG00000041195) #24 IL1F10 (ENSRROG00000029752) #25 IL36B (ENSRROG00000030182) #27 Hominoidea ANCESTRAL SPECIES 30 ENSGT00940000153048.B.c.a.a.a.d.a.b ENSGT00940000154039.a.a.a.i.b.b.a ENSGT00940000162421.c.b ENSGT00940000153770.s.b.a.a.fb.e.a ENSGT00940000163264.B ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Gibbon MODERN SPECIES 4 ENSNLEG00000029517 ENSNLEG00000030490 ENSNLEG00000032176 ENSNLEG00000028052 ENSNLEG00000035571 ENSNLEG00000027290 ENSNLEG00000031230 ENSNLEG00000034622 ENSNLEG00000033446 ENSNLEG00000033940 MALL (ENSNLEG00000030797) NPHP1 (ENSNLEG00000002353) ACOXL (ENSNLEG00000002346) BCL2L11 (ENSNLEG00000002317) ENSNLEG00000029347 PAX8 (ENSNLEG00000002157) #22 ENSNLEG00000027143 PSD4 (ENSNLEG00000002038) #23 IL1RN (ENSNLEG00000002015) #24 ENSNLEG00000002012 #25 IL36RN (ENSNLEG00000001974) #26 IL36G (ENSNLEG00000001973) #29 IL37 (ENSNLEG00000001913) #31 ENSNLEG00000029540 IL1B (ENSNLEG00000029735) ##31 IL1A (ENSNLEG00000001878) CKAP2L (ENSNLEG00000001812) ENSNLEG00000034789 SLC20A1 (ENSNLEG00000001737) ENSNLEG00000029764 ENSNLEG00000030541 Hominidae ANCESTRAL SPECIES 28 ENSGT00940000154039.a.a.a.i.b.b.a ENSGT00940000162421.c.b ENSGT00940000153770.s.b.a.a.fb.e.a ENSGT00940000163264.B ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Homo/Pan/Gorilla group ANCESTRAL SPECIES 29 ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Pan ANCESTRAL SPECIES 42 ENSGT00910000145352 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 Bonobo MODERN SPECIES 14 PAX8 (ENSPPAG00000031225) #22 PSD4 (ENSPPAG00000033376) #23 IL1RN (ENSPPAG00000015989) #24 IL1F10 (ENSPPAG00000043667) #25 IL36RN (ENSPPAG00000041031) #26 IL36A (ENSPPAG00000029741) #28 IL36G (ENSPPAG00000043332) #29 IL1B (ENSPPAG00000040259) ##31 IL1A (ENSPPAG00000032352) CKAP2L (ENSPPAG00000028692) NT5DC4 (ENSPPAG00000042503) SLC20A1 (ENSPPAG00000028697) ENSPPAG00000040293 ENSPPAG00000044134 POLR1B (ENSPPAG00000002774) TTL (ENSPPAG00000031340) Chimpanzee MODERN SPECIES 14 ENSPTRG00000012383 ENSPTRG00000046788 ENSPTRG00000043461 PAX8 (ENSPTRG00000012380) #22 PSD4 (ENSPTRG00000012379) #23 IL1RN (ENSPTRG00000012378) #24 IL1F10 (ENSPTRG00000012377) #25 IL36RN (ENSPTRG00000043228) #26 IL36A (ENSPTRG00000012375) #28 IL36G (ENSPTRG00000012374) #29 IL1B (ENSPTRG00000012372) ##31 IL1A (ENSPTRG00000012371) CKAP2L (ENSPTRG00000012370) NT5DC4 (ENSPTRG00000012369) SLC20A1 (ENSPTRG00000012368) CHCHD5 (ENSPTRG00000012367) POLR1B (ENSPTRG00000012366) TTL (ENSPTRG00000012365) ENSPTRG00000012088 Human MODERN SPECIES 11 C2orf76 (ENSG00000186132) STEAP3 (ENSG00000115107) C1QL2 (ENSG00000144119) MARCO (ENSG00000019169) EN1 (ENSG00000163064) INSIG2 (ENSG00000125629) CCDC93 (ENSG00000125633) DDX18 (ENSG00000088205) DPP10 (ENSG00000175497) ACTR3 (ENSG00000115091) SLC35F5 (ENSG00000115084) RABL2A (ENSG00000144134) FOXD4L1 (ENSG00000184492) ZNG1B (ENSG00000136682) IGKV1OR2-108 (ENSG00000231292) PAX8 (ENSG00000125618) #22 PSD4 (ENSG00000125637) #23 IL1RN (ENSG00000136689) #24 IL1F10 (ENSG00000136697) #25 IL36RN (ENSG00000136695) #26 IL36B (ENSG00000136696) #27 IL36A (ENSG00000136694) #28 IL36G (ENSG00000136688) #29 IL37 (ENSG00000125571) #31 IL1B (ENSG00000125538) ##31 IL1A (ENSG00000115008) CKAP2L (ENSG00000169607) NT5DC4 (ENSG00000144130) SLC20A1 (ENSG00000144136) CHCHD5 (ENSG00000125611) POLR1B (ENSG00000125630) Orangutan MODERN SPECIES 14 ENSPPYG00000033046 ENSPPYG00000039289 IGKV1-27 (ENSPPYG00000034649) ENSPPYG00000041677 ENSPPYG00000031066 ENSPPYG00000033677 ENSPPYG00000031221 ENSPPYG00000033621 ENSPPYG00000032536 ENSPPYG00000030654 ENSPPYG00000012188 ENSPPYG00000032710 ENSPPYG00000029400 ENSPPYG00000038872 ENSPPYG00000012185 PAX8 (ENSPPYG00000030017) #22 PSD4 (ENSPPYG00000012182) #23 IL1RN (ENSPPYG00000032542) #24 IL1F10 (ENSPPYG00000012180) #25 IL36RN (ENSPPYG00000012179) #26 IL36B (ENSPPYG00000012178) #27 IL36A (ENSPPYG00000012177) #28 IL36G (ENSPPYG00000012176) #29 IL37 (ENSPPYG00000012175) #31 IL1B (ENSPPYG00000012174) ##31 IL1A (ENSPPYG00000012173) CKAP2L (ENSPPYG00000012172) NT5DC4 (ENSPPYG00000012171) SLC20A1 (ENSPPYG00000012170) ENSPPYG00000030820 ENSPPYG00000012169 Tarsier MODERN SPECIES 2722 PAX8 (ENSTSYG00000012543) #22 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00940000153094.d ENSGT00940000153770.s.b.a.b ENSGT00940000154279 ENSGT00940000153924.n ENSGT00940000153770.s.b.a.a.fb ENSGT00940000161868 #22 ENSGT00940000154039.a.a.a.i.a.b.b.a ENSGT00940000154869.b.b #21 ENSGT00940000153770.s.b.b ENSGT00940000153094.c ENSGT00940000163478 ENSGT00390000004352 ENSGT00940000158121 ENSGT00390000012177 ENSGT00940000162575 ENSGT00940000158503 ENSGT00940000155135 ENSGT00940000156114 ENSGT00940000162565 ENSGT00960000189758 ENSGT00510000048998 Lemuriformes ANCESTRAL SPECIES 19 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094.c ENSGT00940000153770.s.b.b ENSGT00940000154869.b.b #21 ENSGT00940000154039.a.a.a.i.a.b.b.a ENSGT00940000153770.s.b.a.a.fb.d ENSGT00940000153770.s.b.a.b ENSGT00940000153094.d ENSGT00940000153770.s.b.a.a.fb.c.b ENSGT00940000162421 ENSGT00940000154279 ENSGT00940000153924.n ENSGT00940000153770.s.b.a.a.fb.c.a ENSGT00940000154039.a.a.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Mouse lemur MODERN SPECIES 26 ENSMICG00000030581 ENSMICG00000043516 ENSMICG00000043280 ENSMICG00000038125 ENSMICG00000046769 ENSMICG00000034897 ENSMICG00000036481 ENSMICG00000041618 ENSMICG00000043518 ENSMICG00000047311 ENSMICG00000046744 ENSMICG00000046829 ENSMICG00000029718 ENSMICG00000045451 ENSMICG00000030416 #21 PAX8 (ENSMICG00000003265) #22 PSD4 (ENSMICG00000003255) #23 IL1RN (ENSMICG00000003544) #24 IL1F10 (ENSMICG00000046199) #25 IL36RN (ENSMICG00000043229) #26 ENSMICG00000004490 #27 IL36G (ENSMICG00000016744) #29 IL37 (ENSMICG00000016740) #31 IL1B (ENSMICG00000047498) ##31 IL1A (ENSMICG00000033464) CKAP2L (ENSMICG00000032460) NT5DC4 (ENSMICG00000013300) SLC20A1 (ENSMICG00000013283) CHCHD5 (ENSMICG00000013277) POLR1B (ENSMICG00000013245) TTL (ENSMICG00000043662) Lemuriformes_a ANCESTRAL SPECIES 36 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094.c ENSGT00940000153770.s.b.b ENSGT00940000154869.b.b #21 ENSGT00940000154039.a.a.a.i.a.b.b.a ENSGT00940000153770.s.b.a.a.fb.d ENSGT00940000153094.d ENSGT00940000153770.s.b.a.a.fb.c.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Coquerels sifaka MODERN SPECIES 677 ENSPCOG00000023184 ENSPCOG00000020049 ENSPCOG00000022499 PAX8 (ENSPCOG00000019998) #22 PSD4 (ENSPCOG00000024889) #23 IL1RN (ENSPCOG00000016381) #24 IL1F10 (ENSPCOG00000028463) #25 IL36RN (ENSPCOG00000025643) #26 ENSPCOG00000013329 ENSPCOG00000018730 #27 IL36A (ENSPCOG00000016122) #28 IL36G (ENSPCOG00000020728) #29 IL37 (ENSPCOG00000014483) #31 IL1B (ENSPCOG00000017079) ##31 IL1A (ENSPCOG00000018177) CKAP2L (ENSPCOG00000026665) NT5DC4 (ENSPCOG00000013747) SLC20A1 (ENSPCOG00000016649) CHCHD5 (ENSPCOG00000019948) Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000154869.b.b #21 ENSGT00940000153048.A.b ENSGT00940000153770.s.b.a.a ENSGT00940000154279 ENSGT00940000153924.n.d ENSGT00940000163546 ENSGT00940000154413 ENSGT00940000162421 ENSGT00940000153048.B.d ENSGT00940000162515 ENSGT00940000154039.a.a.a.j ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Tree shrew MODERN SPECIES 1115 PAX8 (ENSTBEG00000008679) #22 PSD4 (ENSTBEG00000007010) #23 Glires ANCESTRAL SPECIES 13 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000154869.b.b #21 ENSGT00940000153048.A.b ENSGT00940000153770.s.b.a.a ENSGT00940000154279 ENSGT00940000153924.n.d ENSGT00940000163546 ENSGT00940000154413 ENSGT00940000162421 ENSGT00940000153048.B.d ENSGT00940000162515 ENSGT00940000154039.a.a.a.j ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Lagomorpha ANCESTRAL SPECIES 31 ENSGT00940000153770.s.b.b ENSGT00940000153924.n.d ENSGT00940000154413 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Rabbit MODERN SPECIES 11 ENSOCUG00000037670 ENSOCUG00000035358 ENSOCUG00000033950 ENSOCUG00000021677 ENSOCUG00000034712 ENSOCUG00000035752 ENSOCUG00000027043 ENSOCUG00000039047 ENSOCUG00000029673 ENSOCUG00000037282 ENSOCUG00000035842 ENSOCUG00000027394 ENSOCUG00000034823 ENSOCUG00000029292 ENSOCUG00000033487 PAX8 (ENSOCUG00000004187) #22 PSD4 (ENSOCUG00000004174) #23 IL1RN (ENSOCUG00000004161) #24 ENSOCUG00000010998 #25 IL36A (ENSOCUG00000014998) #28 IL36G (ENSOCUG00000006660) #29 ENSOCUG00000024654 #31 IL1B (ENSOCUG00000023958) ##31 IL1A (ENSOCUG00000008771) CKAP2L (ENSOCUG00000008765) NT5DC4 (ENSOCUG00000008748) SLC20A1 (ENSOCUG00000001772) CHCHD5 (ENSOCUG00000032402) POLR1B (ENSOCUG00000006058) TTL (ENSOCUG00000004020) ZC3H6 (ENSOCUG00000011125) Pika MODERN SPECIES 4218 ENSOPRG00000012910 #22 PSD4 (ENSOPRG00000012871) #23 IL1RN (ENSOPRG00000012861) #24 IL36RN (ENSOPRG00000012848) #26 IL36A (ENSOPRG00000012842) #28 IL37 (ENSOPRG00000012829) #31 IL1B (ENSOPRG00000012817) ##31 IL1A (ENSOPRG00000012810) CKAP2L (ENSOPRG00000012796) NT5DC4 (ENSOPRG00000012781) SLC20A1 (ENSOPRG00000012768) CHCHD5 (ENSOPRG00000012758) POLR1B (ENSOPRG00000012742) ENSOPRG00000012736 ZC3H6 (ENSOPRG00000012717) Rodentia ANCESTRAL SPECIES 15 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000154869.b.b #21 ENSGT00940000153770.s.b.b ENSGT00940000154413 ENSGT00940000154279.e.a ENSGT00940000153770.s.b.a.a ENSGT00940000154279.e.b ENSGT00940000153924.n.d ENSGT00940000163546 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Rodentia_B ANCESTRAL SPECIES 36 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E Myomorpha ANCESTRAL SPECIES 40 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E Muroidea ANCESTRAL SPECIES 93 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00900000142862 ENSGT00390000008033 Cricetidae ANCESTRAL SPECIES 12 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00900000142862 ENSGT00390000008033 Cricetinae ANCESTRAL SPECIES 1 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00550000075010.i.a ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00900000142862 Golden Hamster MODERN SPECIES 771 Stpg3 (ENSMAUG00000019445) Nelfb (ENSMAUG00000014856) Tor4a (ENSMAUG00000021073) Nrarp (ENSMAUG00000009189) Noxa1 (ENSMAUG00000010573) Entpd8 (ENSMAUG00000007397) Nsmf (ENSMAUG00000014413) ENSMAUG00000017982 ENSMAUG00000012054 Mrpl41 (ENSMAUG00000009177) Dph7 (ENSMAUG00000017456) Zmynd19 (ENSMAUG00000001242) Arrdc1 (ENSMAUG00000009636) Ehmt1 (ENSMAUG00000004489) Cacna1b (ENSMAUG00000008461) Pax8 (ENSMAUG00000004288) #22 Psd4 (ENSMAUG00000011834) #23 Il1rn (ENSMAUG00000015417) #24 Il1f10 (ENSMAUG00000020632) #25 ENSMAUG00000020771 Il36b (ENSMAUG00000000983) #27 ENSMAUG00000013215 Il36a (ENSMAUG00000001890) #28 Tbpl2 (ENSMAUG00000014410) Hnmt (ENSMAUG00000018906) Spopl (ENSMAUG00000007822) Nxph2 (ENSMAUG00000021061) Chinese hamster chok1gshd MODERN SPECIES 188 Stpg3 (ENSCGRG00001021233) Nelfb (ENSCGRG00001013321) Tor4a (ENSCGRG00001010213) Nrarp (ENSCGRG00001010644) Noxa1 (ENSCGRG00001007871) Entpd8 (ENSCGRG00001023582) ENSCGRG00001015054 Nsmf (ENSCGRG00001019298) Pnpla7 (ENSCGRG00001009874) Mrpl41 (ENSCGRG00001007509) Dph7 (ENSCGRG00001002276) Zmynd19 (ENSCGRG00001007529) Arrdc1 (ENSCGRG00001003052) Ehmt1 (ENSCGRG00001002035) Cacna1b (ENSCGRG00001018788) Pax8 (ENSCGRG00001017508) #22 Psd4 (ENSCGRG00001010714) #23 Il1rn (ENSCGRG00001005108) #24 Il1f10 (ENSCGRG00001003880) #25 Il36rn (ENSCGRG00001010036) #26 Il36b (ENSCGRG00001008679) #27 ENSCGRG00001008839 Il36a (ENSCGRG00001005772) #28 ENSCGRG00001015320 #29 Tbpl2 (ENSCGRG00001015310) ENSCGRG00001009248 ENSCGRG00001001542 ENSCGRG00001024843 ENSCGRG00001008614 ##30 Spopl (ENSCGRG00001010346) Nxph2 (ENSCGRG00001024840) Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00390000008033 ENSGT00950000182860.a.b.b Northern American deer mouse MODERN SPECIES 17 Fam166a (ENSPEMG00000017269) Stpg3 (ENSPEMG00000008704) Nelfb (ENSPEMG00000014629) Tor4a (ENSPEMG00000018823) Nrarp (ENSPEMG00000007059) Noxa1 (ENSPEMG00000018544) Entpd8 (ENSPEMG00000010848) Nsmf (ENSPEMG00000011730) Pnpla7 (ENSPEMG00000025361) Mrpl41 (ENSPEMG00000009904) ENSPEMG00000017191 Zmynd19 (ENSPEMG00000014564) Arrdc1 (ENSPEMG00000003766) Ehmt1 (ENSPEMG00000003429) Cacna1b (ENSPEMG00000007882) Pax8 (ENSPEMG00000015473) #22 Psd4 (ENSPEMG00000017053) #23 Il1rn (ENSPEMG00000025629) #24 Il1f10 (ENSPEMG00000024948) #25 Il36rn (ENSPEMG00000019139) #26 Il36b (ENSPEMG00000007893) #27 Il36a (ENSPEMG00000000991) #28 Il36g (ENSPEMG00000006996) #29 Tbpl2 (ENSPEMG00000018472) ENSPEMG00000030551 Hnmt (ENSPEMG00000016185) ENSPEMG00000029398 Spopl (ENSPEMG00000024413) Nxph2 (ENSPEMG00000014216) ENSPEMG00000027862 ENSPEMG00000030960 Prairie vole MODERN SPECIES 12 Nelfb (ENSMOCG00000021212) Tor4a (ENSMOCG00000001164) Nrarp (ENSMOCG00000003107) ENSMOCG00000001293 Noxa1 (ENSMOCG00000020877) Entpd8 (ENSMOCG00000006888) Nsmf (ENSMOCG00000013648) ENSMOCG00000012784 ENSMOCG00000012128 Mrpl41 (ENSMOCG00000014971) Dph7 (ENSMOCG00000008115) Zmynd19 (ENSMOCG00000019044) ENSMOCG00000018871 Ehmt1 (ENSMOCG00000020570) Cacna1b (ENSMOCG00000020272) Pax8 (ENSMOCG00000021381) #22 Psd4 (ENSMOCG00000007380) #23 Il1rn (ENSMOCG00000007998) #24 Il1f10 (ENSMOCG00000018045) #25 Il36rn (ENSMOCG00000001287) #26 Il36b (ENSMOCG00000003995) #27 Il36a (ENSMOCG00000007131) #28 Il36g (ENSMOCG00000018096) #29 Tbpl2 (ENSMOCG00000012483) Hnmt (ENSMOCG00000004456) Spopl (ENSMOCG00000018403) Nxph2 (ENSMOCG00000003297) ENSMOCG00000007029 ENSMOCG00000008295 Lrp1b (ENSMOCG00000007280) ENSMOCG00000001529 Murinae ANCESTRAL SPECIES 1 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a Mus ANCESTRAL SPECIES 1 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 Mus_A ANCESTRAL SPECIES ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158.t ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 Ryukyu mouse MODERN SPECIES 11 Fam166a (MGP_CAROLIEiJ_G0023253) Stpg3 (MGP_CAROLIEiJ_G0023252) MGP_CAROLIEiJ_G0023251 Tor4a (MGP_CAROLIEiJ_G0023250) Nrarp (MGP_CAROLIEiJ_G0023249) Noxa1 (MGP_CAROLIEiJ_G0023248) Entpd8 (MGP_CAROLIEiJ_G0023247) Nsmf (MGP_CAROLIEiJ_G0023246) MGP_CAROLIEiJ_G0023245 Mrpl41 (MGP_CAROLIEiJ_G0023244) MGP_CAROLIEiJ_G0023243 Zmynd19 (MGP_CAROLIEiJ_G0023242) Arrdc1 (MGP_CAROLIEiJ_G0023241) Ehmt1 (MGP_CAROLIEiJ_G0023240) Cacna1b (MGP_CAROLIEiJ_G0023239) Pax8 (MGP_CAROLIEiJ_G0023238) #22 Psd4 (MGP_CAROLIEiJ_G0023237) #23 Il1rn (MGP_CAROLIEiJ_G0023236) #24 Il1f10 (MGP_CAROLIEiJ_G0023235) #25 Il36rn (MGP_CAROLIEiJ_G0023234) #26 Il36a (MGP_CAROLIEiJ_G0023233) #28 Il36g (MGP_CAROLIEiJ_G0023232) #29 Tbpl2 (MGP_CAROLIEiJ_G0023231) Hnmt (MGP_CAROLIEiJ_G0023230) Spopl (MGP_CAROLIEiJ_G0023229) Nxph2 (MGP_CAROLIEiJ_G0023228) MGP_CAROLIEiJ_G0023227 Acbd5 (MGP_CAROLIEiJ_G0023226) Abi1 (MGP_CAROLIEiJ_G0023225) Pdss1 (MGP_CAROLIEiJ_G0023224) Apbb1ip (MGP_CAROLIEiJ_G0023223) Mus_B ANCESTRAL SPECIES 1 ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158.t ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 Mouse MODERN SPECIES 11 Fam166a (ENSMUSG00000026969) Stpg3 (ENSMUSG00000036770) Nelfb (ENSMUSG00000013465) Tor4a (ENSMUSG00000059555) Nrarp (ENSMUSG00000078202) Noxa1 (ENSMUSG00000036805) Entpd8 (ENSMUSG00000036813) Nsmf (ENSMUSG00000006476) Pnpla7 (ENSMUSG00000036833) Mrpl41 (ENSMUSG00000036850) Dph7 (ENSMUSG00000026975) Zmynd19 (ENSMUSG00000026974) Arrdc1 (ENSMUSG00000026972) Ehmt1 (ENSMUSG00000036893) Cacna1b (ENSMUSG00000004113) Pax8 (ENSMUSG00000026976) #22 Psd4 (ENSMUSG00000026979) #23 Il1rn (ENSMUSG00000026981) #24 Il1f10 (ENSMUSG00000046845) #25 Il36rn (ENSMUSG00000026983) #26 Il36a (ENSMUSG00000026984) #28 Il36g (ENSMUSG00000044103) #29 Il36b (ENSMUSG00000026985) #27 Tbpl2 (ENSMUSG00000061809) Hnmt (ENSMUSG00000026986) Spopl (ENSMUSG00000026771) Nxph2 (ENSMUSG00000069132) Potegl (ENSMUSG00000026774) Yme1l1 (ENSMUSG00000026775) Mastl (ENSMUSG00000026779) Acbd5 (ENSMUSG00000026781) Mus_C ANCESTRAL SPECIES ENSGT00730000111343 ENSGT00390000009524 ENSGT00390000012665 ENSGT00950000182888.b ENSGT00940000161928 ENSGT00530000063843.a ENSGT01100000263542.B.a ENSGT00390000000459 ENSGT00940000156763 ENSGT00390000013158.t ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00940000159561 ENSGT00390000002862 spretus MODERN SPECIES 11 Fam166a (MGP_SPRETEiJ_G0024170) Stpg3 (MGP_SPRETEiJ_G0024169) Nelfb (MGP_SPRETEiJ_G0024168) Tor4a (MGP_SPRETEiJ_G0024167) Nrarp (MGP_SPRETEiJ_G0024166) Noxa1 (MGP_SPRETEiJ_G0024165) Entpd8 (MGP_SPRETEiJ_G0024164) Nsmf (MGP_SPRETEiJ_G0024163) Pnpla7 (MGP_SPRETEiJ_G0024162) Mrpl41 (MGP_SPRETEiJ_G0024161) Dph7 (MGP_SPRETEiJ_G0024160) Zmynd19 (MGP_SPRETEiJ_G0024159) Arrdc1 (MGP_SPRETEiJ_G0024158) Ehmt1 (MGP_SPRETEiJ_G0024157) Cacna1b (MGP_SPRETEiJ_G0024156) Pax8 (MGP_SPRETEiJ_G0024155) #22 Psd4 (MGP_SPRETEiJ_G0024154) #23 Il1rn (MGP_SPRETEiJ_G0024153) #24 Il1f10 (MGP_SPRETEiJ_G0024152) #25 Il36rn (MGP_SPRETEiJ_G0024151) #26 Il36a (MGP_SPRETEiJ_G0024150) #28 Il36g (MGP_SPRETEiJ_G0024149) #29 Tbpl2 (MGP_SPRETEiJ_G0024148) Hnmt (MGP_SPRETEiJ_G0024147) MGP_SPRETEiJ_G0024146 Nxph2 (MGP_SPRETEiJ_G0024145) MGP_SPRETEiJ_G0024144 MGP_SPRETEiJ_G0024143 Mastl (MGP_SPRETEiJ_G0024142) Acbd5 (MGP_SPRETEiJ_G0024141) Abi1 (MGP_SPRETEiJ_G0024140) Steppe mouse MODERN SPECIES 2889 Tor4a (ENSMSIG00000023651) Nrarp (ENSMSIG00000023654) ENSMSIG00000023660 ENSMSIG00000023669 Noxa1 (ENSMSIG00000023683) Entpd8 (ENSMSIG00000023735) Nsmf (ENSMSIG00000023803) Pnpla7 (ENSMSIG00000024734) ENSMSIG00000024799 Dph7 (ENSMSIG00000024801) Zmynd19 (ENSMSIG00000024816) Arrdc1 (ENSMSIG00000024841) Ehmt1 (ENSMSIG00000024910) Cacna1b (ENSMSIG00000025204) ENSMSIG00000025414 Pax8 (ENSMSIG00000025431) #22 Psd4 (ENSMSIG00000025484) #23 Il1rn (ENSMSIG00000025569) #24 Il1f10 (ENSMSIG00000025609) #25 Il36rn (ENSMSIG00000025614) #26 Il36b (ENSMSIG00000025650) #27 Il36a (ENSMSIG00000025673) #28 ENSMSIG00000025681 Il36g (ENSMSIG00000025686) #29 ENSMSIG00000025704 Shrew mouse MODERN SPECIES 16 Fam166a (MGP_PahariEiJ_G0024711) Stpg3 (MGP_PahariEiJ_G0024710) Nelfb (MGP_PahariEiJ_G0024709) Tor4a (MGP_PahariEiJ_G0024708) Nrarp (MGP_PahariEiJ_G0024707) Noxa1 (MGP_PahariEiJ_G0024706) Entpd8 (MGP_PahariEiJ_G0024705) Nsmf (MGP_PahariEiJ_G0024704) MGP_PahariEiJ_G0024703 Mrpl41 (MGP_PahariEiJ_G0024702) Dph7 (MGP_PahariEiJ_G0024701) Zmynd19 (MGP_PahariEiJ_G0024700) Arrdc1 (MGP_PahariEiJ_G0024699) Ehmt1 (MGP_PahariEiJ_G0024698) Cacna1b (MGP_PahariEiJ_G0024697) Pax8 (MGP_PahariEiJ_G0024696) #22 MGP_PahariEiJ_G0024695 #23 Il1rn (MGP_PahariEiJ_G0024694) #24 Il1f10 (MGP_PahariEiJ_G0024693) #25 Il36rn (MGP_PahariEiJ_G0024692) #26 MGP_PahariEiJ_G0024691 #27 Il36a (MGP_PahariEiJ_G0024690) #28 MGP_PahariEiJ_G0024689 Hnmt (MGP_PahariEiJ_G0024688) MGP_PahariEiJ_G0024687 Spopl (MGP_PahariEiJ_G0024686) Nxph2 (MGP_PahariEiJ_G0024685) Yme1l1 (MGP_PahariEiJ_G0024684) Mastl (MGP_PahariEiJ_G0024683) Acbd5 (MGP_PahariEiJ_G0024682) Abi1 (MGP_PahariEiJ_G0024681) Rat MODERN SPECIES 13 Nelfb (ENSRNOG00000009377) Tor4a (ENSRNOG00000009369) LOC108350588 (ENSRNOG00000024412) Nrarp (ENSRNOG00000009354) Noxa1 (ENSRNOG00000009286) Entpd8 (ENSRNOG00000009239) Nsmf (ENSRNOG00000008810) ENSRNOG00000069421 Pnpla7 (ENSRNOG00000008190) Mrpl41 (ENSRNOG00000063489) Dph7 (ENSRNOG00000008102) Zmynd19 (ENSRNOG00000007752) Arrdc1 (ENSRNOG00000007622) Ehmt1 (ENSRNOG00000007242) Cacna1b (ENSRNOG00000004560) Pax8 (ENSRNOG00000026203) #22 Psd4 (ENSRNOG00000006079) #23 Il1rn (ENSRNOG00000005871) #24 Il1f10 (ENSRNOG00000005800) #25 Il36rn (ENSRNOG00000005751) #26 Il36b (ENSRNOG00000043323) #27 Il36a (ENSRNOG00000005722) #28 Il36g (ENSRNOG00000005701) #29 ENSRNOG00000067068 Tbpl2 (ENSRNOG00000033682) Hnmt (ENSRNOG00000005223) Spopl (ENSRNOG00000005070) Nxph2 (ENSRNOG00000040333) ENSRNOG00000062547 ENSRNOG00000065360 LOC100912517 (ENSRNOG00000070048) Upper Galilee mountains blind mole rat MODERN SPECIES 1678 Pax8 (ENSNGAG00000000630) #22 Psd4 (ENSNGAG00000012158) #23 Il1rn (ENSNGAG00000013040) #24 Il1f10 (ENSNGAG00000012377) #25 Il36rn (ENSNGAG00000011549) #26 Il36b (ENSNGAG00000011550) #27 Il36a (ENSNGAG00000013233) #28 Il36g (ENSNGAG00000017114) #29 Lesser Egyptian jerboa MODERN SPECIES 177 Pax8 (ENSJJAG00000001232) #22 Psd4 (ENSJJAG00000006466) #23 Il1rn (ENSJJAG00000013921) #24 Il1f10 (ENSJJAG00000015403) #25 Il36rn (ENSJJAG00000017029) #26 ENSJJAG00000001509 Il36g (ENSJJAG00000001783) #29 Il1b (ENSJJAG00000007645) ##31 Il1a (ENSJJAG00000010242) Ckap2l (ENSJJAG00000010727) ENSJJAG00000011515 ENSJJAG00000014037 ENSJJAG00000020382 Chchd5 (ENSJJAG00000020591) Polr1b (ENSJJAG00000000143) Ttl (ENSJJAG00000011686) Kangaroo rat MODERN SPECIES 574 Pax8 (ENSDORG00000002606) #22 Psd4 (ENSDORG00000003392) #23 Il1rn (ENSDORG00000003659) #24 Il1f10 (ENSDORG00000025020) #25 Il36rn (ENSDORG00000010023) #26 Il36a (ENSDORG00000013006) #28 ENSDORG00000013003 #29 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000154279.e.b.b.b ENSGT00940000153770.s.b.a.a ENSGT00940000154279.e.b.b.a ENSGT00940000162515 ENSGT00940000154279.e.b.a ENSGT00940000153924.m.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000155135.j.b ENSGT00940000155135.j.a ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00840000130051 ENSGT00940000154413.h ENSGT00940000162421.a.a.b ENSGT00940000153048.A.b ENSGT00940000153770.s.b.a.a ENSGT00940000154279.e.b.b.a ENSGT00940000153094.i.b ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976.i #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Hystricomorpha_a ANCESTRAL SPECIES 52 ENSGT00940000161868 #22 ENSGT00940000161976.i #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Guinea pig MODERN SPECIES 73 ENSCPOG00000010975 FGFRL1 (ENSCPOG00000008031) IDUA (ENSCPOG00000013790) SLC26A1 (ENSCPOG00000013797) DGKQ (ENSCPOG00000002313) TMEM175 (ENSCPOG00000026846) GAK (ENSCPOG00000013147) CPLX1 (ENSCPOG00000039819) PCGF3 (ENSCPOG00000034430) SLC49A3 (ENSCPOG00000007487) ENSCPOG00000008678 PDE6B (ENSCPOG00000022569) PIGG (ENSCPOG00000005447) ENSCPOG00000036063 ENSCPOG00000035445 PAX8 (ENSCPOG00000012011) #22 PSD4 (ENSCPOG00000011999) #23 IL1RN (ENSCPOG00000038324) #24 IL1F10 (ENSCPOG00000008348) #25 IL36RN (ENSCPOG00000008529) #26 ENSCPOG00000034366 #27 ENSCPOG00000039065 #27 ENSCPOG00000035813 #28 ENSCPOG00000039744 #29 ENSCPOG00000023405 #31 ENSCPOG00000026714 #31 ENSCPOG00000036528 #29 ENSCPOG00000040372 #28 ENSCPOG00000037328 #27 IL1B (ENSCPOG00000001975) ##31 IL1A (ENSCPOG00000026158) Hystricomorpha_b ANCESTRAL SPECIES 59 ENSGT00940000161868 #22 ENSGT00940000161976.i #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 Degu MODERN SPECIES 93 ENSODEG00000007829 ENSODEG00000019210 ENSODEG00000005578 ENSODEG00000006398 PAX8 (ENSODEG00000005692) #22 PSD4 (ENSODEG00000005583) #23 IL1RN (ENSODEG00000006153) #24 IL1F10 (ENSODEG00000005739) #25 IL36RN (ENSODEG00000006210) #26 ENSODEG00000007018 IL36A (ENSODEG00000005630) #28 ENSODEG00000019269 IL1B (ENSODEG00000006687) ##31 CKAP2L (ENSODEG00000005587) SLC20A1 (ENSODEG00000006024) CHCHD5 (ENSODEG00000005670) POLR1B (ENSODEG00000005501) TTL (ENSODEG00000007061) ENSODEG00000007009 ZC3H6 (ENSODEG00000009099) Long-tailed chinchilla MODERN SPECIES 177 ENSCLAG00000005318 ENSCLAG00000005407 ENSCLAG00000003098 ENSCLAG00000003413 ENSCLAG00000003934 ENSCLAG00000004101 ENSCLAG00000004289 ENSCLAG00000004473 ENSCLAG00000006465 ENSCLAG00000003750 ENSCLAG00000007227 ENSCLAG00000009359 ENSCLAG00000009390 ENSCLAG00000009569 ENSCLAG00000003355 PAX8 (ENSCLAG00000004013) #22 PSD4 (ENSCLAG00000004856) #23 IL1RN (ENSCLAG00000004988) #24 IL1F10 (ENSCLAG00000005905) #25 IL36RN (ENSCLAG00000003646) #26 ENSCLAG00000003697 #27 ENSCLAG00000003745 #27 ENSCLAG00000004006 #27 IL36G (ENSCLAG00000004281) #29 ENSCLAG00000017636 IL1B (ENSCLAG00000003778) ##31 IL1A (ENSCLAG00000004178) CKAP2L (ENSCLAG00000004664) SLC20A1 (ENSCLAG00000005137) CHCHD5 (ENSCLAG00000005483) POLR1B (ENSCLAG00000004899) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000037102 FEM1C (ENSHGLG00000043263) TICAM2 (ENSHGLG00000033848) TMED7 (ENSHGLG00000039198) CDO1 (ENSHGLG00000019411) ATG12 (ENSHGLG00000041482) ENSHGLG00000007878 ENSHGLG00000040438 LVRN (ENSHGLG00000009169) ARL14EPL (ENSHGLG00000033293) COMMD10 (ENSHGLG00000035743) ENSHGLG00000035376 SEMA6A (ENSHGLG00000014606) ENSHGLG00000006231 ENSHGLG00000041113 #21 PAX8 (ENSHGLG00000015233) #22 ENSHGLG00000040841 ENSHGLG00000038423 #23 ENSHGLG00000016761 #23 IL1RN (ENSHGLG00000048066) #24 IL1F10 (ENSHGLG00000049458) #25 IL36RN (ENSHGLG00000007845) #26 IL36B (ENSHGLG00000006883) #27 ENSHGLG00000042739 IL36A (ENSHGLG00000005025) #28 IL36G (ENSHGLG00000040519) #29 ENSHGLG00000008467 ENSHGLG00000034136 #31 ENSHGLG00000007464 #31 IL1B (ENSHGLG00000006083) ##31 IL1A (ENSHGLG00000047729) Sciuridae ANCESTRAL SPECIES 44 ENSGT00940000153048.B.d.c.b ENSGT00940000162421.b.b.b ENSGT00940000154039.a.a.a.j ENSGT00940000153048.B.d.c.a.b.b.a ENSGT00940000153048.B.d.c.a.a ENSGT00940000154413.e ENSGT00940000154279.e.a.d ENSGT00940000154413.f ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Marmotini ANCESTRAL SPECIES 56 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Alpin marmot MODERN SPECIES 63 ENSMMMG00000003067 #21 ENSMMMG00000003055 ENSMMMG00000003054 ENSMMMG00000003043 ENSMMMG00000003030 ENSMMMG00000003018 ENSMMMG00000003009 ENSMMMG00000003005 ENSMMMG00000002995 ENSMMMG00000002977 ENSMMMG00000002972 ENSMMMG00000002964 ENSMMMG00000002956 ENSMMMG00000002942 ENSMMMG00000002924 PAX8 (ENSMMMG00000002865) #22 PSD4 (ENSMMMG00000002787) #23 IL1RN (ENSMMMG00000002728) #24 IL1F10 (ENSMMMG00000002716) #25 IL36RN (ENSMMMG00000002694) #26 ENSMMMG00000002672 #27 IL36A (ENSMMMG00000002651) #28 ENSMMMG00000002626 #29 IL1B (ENSMMMG00000002615) ##31 IL1A (ENSMMMG00000002589) CKAP2L (ENSMMMG00000002568) SLC20A1 (ENSMMMG00000002525) ENSMMMG00000002509 CHCHD5 (ENSMMMG00000002505) POLR1B (ENSMMMG00000002463) TTL (ENSMMMG00000002449) Marmotini_b ANCESTRAL SPECIES 174 ENSGT00940000161868 #22 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Squirrel MODERN SPECIES 383 PAX8 (ENSSTOG00000024664) #22 ENSSTOG00000014455 IL1RN (ENSSTOG00000014450) #24 IL1F10 (ENSSTOG00000014447) #25 IL36RN (ENSSTOG00000014442) #26 ENSSTOG00000014564 #27 IL36A (ENSSTOG00000001732) #28 IL36G (ENSSTOG00000001727) #29 ENSSTOG00000027018 #31 IL37 (ENSSTOG00000008646) #31 IL1B (ENSSTOG00000002292) ##31 IL1A (ENSSTOG00000002285) CKAP2L (ENSSTOG00000025468) SLC20A1 (ENSSTOG00000008202) CHCHD5 (ENSSTOG00000008190) POLR1B (ENSSTOG00000008160) Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005021980 ENSSVLG00005022012 ENSSVLG00005022087 ENSSVLG00005022131 ENSSVLG00005022162 ENSSVLG00005022225 ENSSVLG00005022258 ENSSVLG00005022282 ENSSVLG00005022318 ENSSVLG00005022349 ENSSVLG00005022375 ENSSVLG00005022390 ENSSVLG00005005354 ENSSVLG00005005425 ENSSVLG00005005443 PAX8 (ENSSVLG00005005544) #22 ENSSVLG00005005771 #23 IL1RN (ENSSVLG00005005840) #24 IL1F10 (ENSSVLG00005005916) #25 IL36RN (ENSSVLG00005005954) #26 ENSSVLG00005005994 #27 IL36A (ENSSVLG00005006035) #28 IL36G (ENSSVLG00005006084) #29 IL37 (ENSSVLG00005006202) #31 IL1B (ENSSVLG00005006237) ##31 ENSSVLG00005006289 ENSSVLG00005006322 CKAP2L (ENSSVLG00005006391) SLC20A1 (ENSSVLG00005006537) CHCHD5 (ENSSVLG00005006621) POLR1B (ENSSVLG00005006694) Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000154279 ENSGT00940000153924 ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A ENSGT00940000162421 ENSGT00940000153048.B ENSGT00940000154413 ENSGT00940000162515 ENSGT00940000154039.a.a.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Eulipotyphla ANCESTRAL SPECIES ENSGT00940000161868 #22 Hedgehog MODERN SPECIES 2476 ENSEEUG00000003041 #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000154279 ENSGT00940000153924 ENSGT00940000153770.s.b.a.a ENSGT00940000162515 ENSGT00940000153048.A ENSGT00940000154039.a.a.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Artiodactyla ANCESTRAL SPECIES 16 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A ENSGT00940000163546 ENSGT00940000153924 ENSGT00940000153770.s.b.b ENSGT00940000154279 ENSGT00940000154039.a.a.a ENSGT00940000154413 ENSGT00940000162515 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Suina ANCESTRAL SPECIES 59 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Chacoan peccary MODERN SPECIES 937 ENSCWAG00000011508 PAX8 (ENSCWAG00000010972) #22 PSD4 (ENSCWAG00000010821) #23 IL1RN (ENSCWAG00000010722) #24 IL1F10 (ENSCWAG00000010674) #25 IL36RN (ENSCWAG00000010643) #26 ENSCWAG00000010617 #27 IL36A (ENSCWAG00000010573) #28 IL36G (ENSCWAG00000010540) #29 IL1B (ENSCWAG00000010491) ##31 IL1A (ENSCWAG00000010459) CKAP2L (ENSCWAG00000012675) SLC20A1 (ENSCWAG00000012621) CHCHD5 (ENSCWAG00000012579) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154279 ENSGT00940000154039.a.a.a ENSGT00940000154413 ENSGT00940000153924 ENSGT00940000153048.A ENSGT00940000153770.s.b.a.a ENSGT00940000162515 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154413 ENSGT00940000153924 ENSGT00940000153048.A ENSGT00940000153770.s.b.a.a ENSGT00940000162515 ENSGT00940000154279 ENSGT00940000154039.a.a.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Pecora ANCESTRAL SPECIES 5 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154413 ENSGT00940000153924 ENSGT00940000153770.s.b.a.a.i.a ENSGT00940000154279.k.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000154279.k.b ENSGT00940000162515 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Yarkand deer MODERN SPECIES 2 FOXI3 (ENSCHYG00000006575) TEX37 (ENSCHYG00000006544) EIF2AK3 (ENSCHYG00000006244) RPIA (ENSCHYG00000006181) ENSCHYG00000006157 ENSCHYG00000006143 ENSCHYG00000005147 ENSCHYG00000004967 ENSCHYG00000004958 ENSCHYG00000004948 ENSCHYG00000004936 ENSCHYG00000004927 ENSCHYG00000004919 ENSCHYG00000004915 ENSCHYG00000004866 PAX8 (ENSCHYG00000004732) #22 PSD4 (ENSCHYG00000004655) #23 IL1RN (ENSCHYG00000004620) #24 IL1F10 (ENSCHYG00000004601) #25 IL36RN (ENSCHYG00000004592) #26 ENSCHYG00000004573 #27 IL36A (ENSCHYG00000004567) #28 ENSCHYG00000004557 #29 ENSCHYG00000004549 #31 IL37 (ENSCHYG00000004531) #31 IL1B (ENSCHYG00000004515) ##31 IL1A (ENSCHYG00000004464) CKAP2L (ENSCHYG00000004352) SLC20A1 (ENSCHYG00000004127) CHCHD5 (ENSCHYG00000026674) POLR1B (ENSCHYG00000026586) Percora_a ANCESTRAL SPECIES 13 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000162515.e ENSGT00940000154279.l ENSGT00940000153770.s.b.a.a.i.a.b.b.a ENSGT00940000154279.k.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000154279.k.b ENSGT00940000154413 ENSGT00940000153770.s.b.a.a.i.a.b.a ENSGT00940000162515.f.b ENSGT00940000153048.A.k ENSGT00940000153770.s.b.a.a.i.a.a ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Bovidae ANCESTRAL SPECIES 5 ENSGT00940000153048.A.l.b ENSGT00940000153924 ENSGT00940000153770.s.b.a.a.i.a.b.b.b ENSGT00940000153048.A.l.a ENSGT00940000162515.e ENSGT00940000154279.l ENSGT00940000153770.s.b.a.a.i.a.b.b.a ENSGT00940000154279.k.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000162515.f.b ENSGT00940000154279.k.b ENSGT00940000154413 ENSGT00940000153048.A.k ENSGT00940000153770.s.b.a.a.i.a.a ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Caprinae ANCESTRAL SPECIES 9 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153924 ENSGT00940000153048.A.l.a ENSGT00940000153770.s.b.b ENSGT00940000154279.l ENSGT00940000153770.s.b.a.a.i.b.b ENSGT00940000153770.s.b.a.a.i.a.b.b.b ENSGT00940000154279.k.a ENSGT00940000153770.s.b.a.a.i.b.a ENSGT00940000162515.f.b ENSGT00940000154279.k.b ENSGT00940000154413 ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Goat MODERN SPECIES 2 FOXI3 (ENSCHIG00000017715) TEX37 (ENSCHIG00000008884) EIF2AK3 (ENSCHIG00000014792) ENSCHIG00000016539 ENSCHIG00000013882 ENSCHIG00000018862 ENSCHIG00000021988 ENSCHIG00000016512 ENSCHIG00000007937 ENSCHIG00000013725 ENSCHIG00000009419 ENSCHIG00000025571 ENSCHIG00000007247 ENSCHIG00000005902 ENSCHIG00000018738 PAX8 (ENSCHIG00000019864) #22 PSD4 (ENSCHIG00000025022) #23 IL1RN (ENSCHIG00000009696) #24 IL1F10 (ENSCHIG00000026412) #25 IL36RN (ENSCHIG00000021710) #26 ENSCHIG00000010918 #27 IL36A (ENSCHIG00000020898) #28 IL36G (ENSCHIG00000024406) #29 ENSCHIG00000003716 #31 IL1B (ENSCHIG00000024469) ##31 IL1A (ENSCHIG00000011256) CKAP2L (ENSCHIG00000011558) NT5DC4 (ENSCHIG00000021437) SLC20A1 (ENSCHIG00000019150) CHCHD5 (ENSCHIG00000024993) POLR1B (ENSCHIG00000014527) Rambouillet Sheep MODERN SPECIES 19 THNSL2 (ENSOARG00020000914) FOXI3 (ENSOARG00020000935) TEX37 (ENSOARG00020000939) ENSOARG00020000945 EIF2AK3 (ENSOARG00020000964) RPIA (ENSOARG00020001011) ENSOARG00020001068 ENSOARG00020001377 ENSOARG00020001383 ENSOARG00020001393 ENSOARG00020001398 ENSOARG00020001405 ENSOARG00020001409 ENSOARG00020001420 ENSOARG00020001431 PAX8 (ENSOARG00020001447) #22 IL1RN (ENSOARG00020001505) #24 IL1F10 (ENSOARG00020001537) #25 IL36RN (ENSOARG00020001543) #26 ENSOARG00020001559 #29 ENSOARG00020001567 #31 IL1B (ENSOARG00020001628) ##31 IL1A (ENSOARG00020001647) CKAP2L (ENSOARG00020001672) SLC20A1 (ENSOARG00020001709) ENSOARG00020001721 CHCHD5 (ENSOARG00020001731) POLR1B (ENSOARG00020001752) TTL (ENSOARG00020001816) NCK2 (ENSOARG00020001838) ECRG4 (ENSOARG00020001846) Bovinae ANCESTRAL SPECIES 4 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153048.A.l.b ENSGT00940000153924 ENSGT00940000153770.s.b.a.a.i.a.b.b.b ENSGT00940000153048.A.l.a ENSGT00940000154279.l ENSGT00940000153770.s.b.a.a.i.a.b.b.a ENSGT00940000154279.k.a.a.b.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000153048.A.k ENSGT00940000153770.s.b.a.a.i.a.a ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Bos ANCESTRAL SPECIES 5 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153048.A.l.b ENSGT00940000153924 ENSGT00940000153770.s.b.a.a.i.a.b.b.a ENSGT00940000154279.k.a.a.b.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000153048.A.k ENSGT00940000153770.s.b.a.a.i.a.a ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Bos_b ANCESTRAL SPECIES 9 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153048.A.l.b ENSGT00940000153924 ENSGT00940000153770.s.b.a.a.i.a.b.b.b ENSGT00940000154279.k.a.a.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000153770.s.b.a.a.i.a.b.a ENSGT00940000162515.f.b ENSGT00940000153770.s.b.a.a.i.a.a ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000003316.d.g.a.a.a ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Cow MODERN SPECIES 2 FABP1 (ENSBTAG00000018054) THNSL2 (ENSBTAG00000004364) FOXI3 (ENSBTAG00000040093) TEX37 (ENSBTAG00000009033) EIF2AK3 (ENSBTAG00000000184) RPIA (ENSBTAG00000002866) ENSBTAG00000045659 ENSBTAG00000045514 ENSBTAG00000051342 ENSBTAG00000003408 ENSBTAG00000051611 ENSBTAG00000047029 ENSBTAG00000050329 ENSBTAG00000054154 ENSBTAG00000047185 PAX8 (ENSBTAG00000019354) #22 PSD4 (ENSBTAG00000019072) #23 IL1RN (ENSBTAG00000019665) #24 IL1F10 (ENSBTAG00000018012) #25 IL36RN (ENSBTAG00000039839) #26 IL36B (ENSBTAG00000002088) #27 IL36A (ENSBTAG00000002087) #28 IL36G (ENSBTAG00000002085) #29 ENSBTAG00000039476 #31 IL37 (ENSBTAG00000013675) #31 IL1B (ENSBTAG00000001321) ##31 ENSBTAG00000047637 IL1A (ENSBTAG00000010349) CKAP2L (ENSBTAG00000002298) SLC20A1 (ENSBTAG00000007895) CHCHD5 (ENSBTAG00000052525) Hybrid Bos Indicus MODERN SPECIES 2 ENSBIXG00005013000 THNSL2 (ENSBIXG00005013033) FOXI3 (ENSBIXG00005013060) TEX37 (ENSBIXG00005013074) EIF2AK3 (ENSBIXG00005013174) RPIA (ENSBIXG00005006722) ENSBIXG00005013253 ENSBIXG00005013257 ENSBIXG00005006800 ENSBIXG00005001529 ENSBIXG00005006723 ENSBIXG00005001531 ENSBIXG00005013322 ENSBIXG00005001577 ENSBIXG00005006725 PAX8 (ENSBIXG00005013401) #22 IL1RN (ENSBIXG00005013595) #24 IL1F10 (ENSBIXG00005013623) #25 IL36RN (ENSBIXG00005013654) #26 ENSBIXG00005013671 #27 IL36A (ENSBIXG00005013806) #28 IL36G (ENSBIXG00005013845) #29 ENSBIXG00005005414 #31 IL37 (ENSBIXG00005007317) #31 IL1B (ENSBIXG00005013957) ##31 ENSBIXG00005013983 IL1A (ENSBIXG00005014003) CKAP2L (ENSBIXG00005001762) SLC20A1 (ENSBIXG00005014094) ENSBIXG00005006368 CHCHD5 (ENSBIXG00005001841) Bos_a ANCESTRAL SPECIES 6 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153048.A.l.b ENSGT00940000153924 ENSGT00940000153770.s.b.a.a.i.a.b.b.a ENSGT00940000154279.k.a.a.b.a ENSGT00940000153770.s.b.a.a.i.b ENSGT00940000153048.A.k ENSGT00940000153770.s.b.a.a.i.a.a ENSGT00940000162515.f.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Wild yak MODERN SPECIES 287 ENSBMUG00000008624 ENSBMUG00000008613 ENSBMUG00000008609 ENSBMUG00000008589 ENSBMUG00000008585 ENSBMUG00000008570 PAX8 (ENSBMUG00000008442) #22 PSD4 (ENSBMUG00000008316) #23 IL1RN (ENSBMUG00000008175) #24 IL1F10 (ENSBMUG00000008154) #25 IL36RN (ENSBMUG00000008151) #26 ENSBMUG00000008148 #27 ENSBMUG00000008095 #28 IL36G (ENSBMUG00000008051) #29 IL37 (ENSBMUG00000007995) #31 IL1B (ENSBMUG00000007939) ##31 ENSBMUG00000007924 IL1A (ENSBMUG00000007911) CKAP2L (ENSBMUG00000007898) NT5DC4 (ENSBMUG00000007884) SLC20A1 (ENSBMUG00000007857) CHCHD5 (ENSBMUG00000007853) Domestic yak MODERN SPECIES 28 ENSBGRG00000018232 ENSBGRG00000018190 KRCC1 (ENSBGRG00000018104) SMYD1 (ENSBGRG00000017869) ENSBGRG00000017744 THNSL2 (ENSBGRG00000017501) FOXI3 (ENSBGRG00000017441) TEX37 (ENSBGRG00000017385) EIF2AK3 (ENSBGRG00000016796) RPIA (ENSBGRG00000016607) ENSBGRG00000016576 ENSBGRG00000016462 ENSBGRG00000016163 ENSBGRG00000016116 ENSBGRG00000015902 PAX8 (ENSBGRG00000015485) #22 PSD4 (ENSBGRG00000015366) #23 IL1RN (ENSBGRG00000015122) #24 IL1F10 (ENSBGRG00000015059) #25 IL36RN (ENSBGRG00000015003) #26 ENSBGRG00000014951 #27 ENSBGRG00000014739 #28 IL36G (ENSBGRG00000014645) #29 ENSBGRG00000014599 #31 ENSBGRG00000014317 #31 IL1B (ENSBGRG00000014234) ##31 IL1A (ENSBGRG00000014153) CKAP2L (ENSBGRG00000014090) SLC20A1 (ENSBGRG00000013607) CHCHD5 (ENSBGRG00000013449) POLR1B (ENSBGRG00000012846) American bison MODERN SPECIES 2965 FOXI3 (ENSBBBG00000017548) TEX37 (ENSBBBG00000008163) EIF2AK3 (ENSBBBG00000008655) RPIA (ENSBBBG00000008513) ENSBBBG00000007266 ENSBBBG00000017008 ENSBBBG00000007177 ENSBBBG00000004205 ENSBBBG00000008511 ENSBBBG00000016966 ENSBBBG00000016963 ENSBBBG00000007144 ENSBBBG00000016948 PAX8 (ENSBBBG00000008755) #22 ENSBBBG00000016789 #23 IL1RN (ENSBBBG00000016773) #24 IL1F10 (ENSBBBG00000007425) #25 IL36RN (ENSBBBG00000016741) #26 ENSBBBG00000007457 #27 IL36A (ENSBBBG00000016723) #28 ENSBBBG00000016695 #29 ENSBBBG00000016684 #31 IL37 (ENSBBBG00000007905) #31 IL1B (ENSBBBG00000004109) ##31 IL1A (ENSBBBG00000004101) CKAP2L (ENSBBBG00000004092) SLC20A1 (ENSBBBG00000000738) CHCHD5 (ENSBBBG00000000764) POLR1B (ENSBBBG00000016563) Siberian musk deer MODERN SPECIES 243 ENSMMSG00000000356 ENSMMSG00000000368 TEX37 (ENSMMSG00000000376) EIF2AK3 (ENSMMSG00000000390) RPIA (ENSMMSG00000000421) ENSMMSG00000000579 ENSMMSG00000001328 ENSMMSG00000001347 ENSMMSG00000001368 ENSMMSG00000001380 ENSMMSG00000001393 ENSMMSG00000001403 ENSMMSG00000001407 ENSMMSG00000001417 ENSMMSG00000001454 PAX8 (ENSMMSG00000001557) #22 PSD4 (ENSMMSG00000001714) #23 IL1RN (ENSMMSG00000001813) #24 IL1F10 (ENSMMSG00000001837) #25 IL36RN (ENSMMSG00000001844) #26 ENSMMSG00000001855 #27 IL36A (ENSMMSG00000001878) #28 IL36G (ENSMMSG00000001905) #29 IL37 (ENSMMSG00000001926) #31 IL1B (ENSMMSG00000001955) ##31 IL1A (ENSMMSG00000001977) CKAP2L (ENSMMSG00000001992) SLC20A1 (ENSMMSG00000002017) CHCHD5 (ENSMMSG00000002033) POLR1B (ENSMMSG00000002079) TTL (ENSMMSG00000002168) Cetacea ANCESTRAL SPECIES 16 ENSGT00940000162565 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154413 ENSGT00940000153924 ENSGT00940000154279 ENSGT00940000153770.s.b.a.a ENSGT00940000164880 ENSGT00940000154039.a.a.a.c ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000174607 Odontoceti ANCESTRAL SPECIES 15 ENSGT00940000168371 ENSGT00940000162565 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154413 ENSGT00940000153924 ENSGT00940000154279 ENSGT00940000153770.s.b.a.a ENSGT00940000164880 ENSGT00940000154039.a.a.a.c ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00390000018741.l ENSGT00390000006413 ENSGT00940000153203.A.b ENSGT00940000156588 ENSGT00510000048998 ENSGT00940000162565 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154279 ENSGT00940000154039.a.a.a.c ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00940000153203.A.b ENSGT00940000156588 ENSGT00510000048998 ENSGT00940000162565 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00940000158121 ENSGT00910000147166 ENSGT00940000160086.f.a.b ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000154279 ENSGT00940000154039.a.a.a.c ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 ENSGT00940000161918 ENSGT00830000128368.a Monodontidae ANCESTRAL SPECIES ENSGT00940000161868 #22 Narwhal MODERN SPECIES 305 RNF103 (ENSMMNG00015005296) RMND5A (ENSMMNG00015005282) CD8A (ENSMMNG00015005262) ENSMMNG00015005244 KRCC1 (ENSMMNG00015005228) SMYD1 (ENSMMNG00015005196) FABP1 (ENSMMNG00015005175) THNSL2 (ENSMMNG00015005164) FOXI3 (ENSMMNG00015005155) EIF2AK3 (ENSMMNG00015005140) ENSMMNG00015005130 ENSMMNG00015005119 RPIA (ENSMMNG00015020688) IGKC (ENSMMNG00015020679) ENSMMNG00015020669 PAX8 (ENSMMNG00015020622) #22 PSD4 (ENSMMNG00015020578) #23 IL1RN (ENSMMNG00015020548) #24 IL36RN (ENSMMNG00015020537) #26 ENSMMNG00015020514 #27 ENSMMNG00015020499 #29 IL1B (ENSMMNG00015020485) ##31 ENSMMNG00015020474 IL1A (ENSMMNG00015020458) CKAP2L (ENSMMNG00015020436) SLC20A1 (ENSMMNG00015020377) ENSMMNG00015020358 CHCHD5 (ENSMMNG00015020338) POLR1B (ENSMMNG00015020275) TTL (ENSMMNG00015020234) ZC3H6 (ENSMMNG00015020215) Vaquita MODERN SPECIES 4 RNF103 (ENSPSNG00000010129) RMND5A (ENSPSNG00000010178) CD8A (ENSPSNG00000010269) ENSPSNG00000010528 KRCC1 (ENSPSNG00000010603) SMYD1 (ENSPSNG00000010676) FABP1 (ENSPSNG00000010916) THNSL2 (ENSPSNG00000011047) FOXI3 (ENSPSNG00000011118) EIF2AK3 (ENSPSNG00000011192) ENSPSNG00000011435 ENSPSNG00000011450 RPIA (ENSPSNG00000011485) ENSPSNG00000011698 ENSPSNG00000013047 PAX8 (ENSPSNG00000013113) #22 PSD4 (ENSPSNG00000013283) #23 IL1RN (ENSPSNG00000013351) #24 ENSPSNG00000013522 IL36RN (ENSPSNG00000013711) #26 ENSPSNG00000013793 IL36G (ENSPSNG00000013865) #29 IL1B (ENSPSNG00000014028) ##31 IL1A (ENSPSNG00000014170) CKAP2L (ENSPSNG00000014209) SLC20A1 (ENSPSNG00000014537) CHCHD5 (ENSPSNG00000014612) POLR1B (ENSPSNG00000014722) TTL (ENSPSNG00000015237) ZC3H6 (ENSPSNG00000015307) ZC3H8 (ENSPSNG00000015380) Dolphin MODERN SPECIES 172 ENSTTRG00000011957 PAX8 (ENSTTRG00000011948) #22 ENSTTRG00000011937 #23 Camelidae ANCESTRAL SPECIES 56 ENSGT00940000154039.a.a.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Arabian camel MODERN SPECIES 20 EIF2AK3 (ENSCDRG00005013101) RPIA (ENSCDRG00005013052) ENSCDRG00005013015 ENSCDRG00005012974 IGKV5-2 (ENSCDRG00005012952) IGKV4-1 (ENSCDRG00005012938) ENSCDRG00005012901 #21 ENSCDRG00005012857 ENSCDRG00005012837 ENSCDRG00005012793 ENSCDRG00005012773 ENSCDRG00005012747 ENSCDRG00005012735 ENSCDRG00005012634 ENSCDRG00005012601 PAX8 (ENSCDRG00005012432) #22 PSD4 (ENSCDRG00005012314) #23 IL1RN (ENSCDRG00005012168) #24 IL1F10 (ENSCDRG00005012124) #25 IL36RN (ENSCDRG00005012099) #26 ENSCDRG00005012049 #27 IL36A (ENSCDRG00005011983) #28 IL36G (ENSCDRG00005011890) #29 ENSCDRG00005011869 IL37 (ENSCDRG00005011413) #31 IL1B (ENSCDRG00005011340) ##31 IL1A (ENSCDRG00005011294) CKAP2L (ENSCDRG00005011243) NT5DC4 (ENSCDRG00005011082) SLC20A1 (ENSCDRG00005011004) CHCHD5 (ENSCDRG00005010937) Alpaca MODERN SPECIES 220 ENSVPAG00000003973 #22 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000154279 ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A ENSGT00940000154039.a.a.a ENSGT00940000154869.b.b #21 ENSGT00940000162515 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Carnivora ANCESTRAL SPECIES 19 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094.o.b ENSGT00940000154279.n.a ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.b ENSGT00940000154279.n.b ENSGT00940000153924 ENSGT00940000153048.A ENSGT00940000154039.a.a.a ENSGT00940000153770.s.b.a.a ENSGT00940000162515 ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 Caniformia ANCESTRAL SPECIES 18 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094.o.b ENSGT00940000154279.n.a.a.a.a ENSGT00940000153770.s.b.a.a.c ENSGT00940000154413 ENSGT00940000154279.n.a.a.b ENSGT00940000162515 ENSGT00940000154279.n.a.a.a.b.b ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.b ENSGT00940000154279.n.b ENSGT00940000153924 ENSGT00940000153048.A ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E Canidae ANCESTRAL SPECIES 25 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094.o.b ENSGT00940000154279.n.a.a.a.b.b.b ENSGT00940000154279.n.b.c ENSGT00940000154279.n.b.d ENSGT00490000043329.a.a.a.pb.b.a.b.b ENSGT00940000154279.n.a.a.a.b.b.a ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.a.c ENSGT00940000154413 ENSGT00940000154279.n.a.a.a.a ENSGT00940000153770.s.b.b ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E Canis_lupus ANCESTRAL SPECIES 10 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094.o.b ENSGT00940000154279.n.a.a.a.b.b.b ENSGT00940000154279.n.b.c.c.b.a ENSGT00940000154279.n.b.c.c.a ENSGT00940000154279.n.b.d ENSGT00490000043329.a.a.a.pb.b.a.b.b ENSGT00940000154279.n.a.a.a.b.b.a.a ENSGT00940000154279.n.a.a.a.b.b.a.b ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.a.c ENSGT00940000154413 ENSGT00940000154279.n.a.a.a.a ENSGT00940000153770.s.b.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E Dog MODERN SPECIES 8 RPIA (ENSCAFG00845012847) ENSCAFG00845012811 ENSCAFG00845012800 ENSCAFG00845012778 ENSCAFG00845012749 ENSCAFG00845012721 ENSCAFG00845012702 ENSCAFG00845012678 ENSCAFG00845012659 IGKV4-1 (ENSCAFG00845012628) ENSCAFG00845012576 ENSCAFG00845012540 ENSCAFG00845012528 ENSCAFG00845012494 ENSCAFG00845012461 PAX8 (ENSCAFG00845012268) #22 PSD4 (ENSCAFG00845012084) #23 IL1RN (ENSCAFG00845011971) #24 ENSCAFG00845011918 #25 IL36RN (ENSCAFG00845011829) #26 IL36B (ENSCAFG00845011786) #27 IL1B (ENSCAFG00845011661) ##31 IL37 (ENSCAFG00845011516) #31 IL1A (ENSCAFG00845011308) CKAP2L (ENSCAFG00845011080) SLC20A1 (ENSCAFG00845011031) CHCHD5 (ENSCAFG00845011007) POLR1B (ENSCAFG00845010775) TTL (ENSCAFG00845010684) ENSCAFG00845010620 ZC3H6 (ENSCAFG00845010576) Dingo MODERN SPECIES 223 ENSCAFG00020016922 ENSCAFG00020016924 ENSCAFG00020016925 ENSCAFG00020016926 ENSCAFG00020016927 ENSCAFG00020016929 ENSCAFG00020016930 ENSCAFG00020016932 ENSCAFG00020016934 ENSCAFG00020016936 ENSCAFG00020016937 ENSCAFG00020016938 ENSCAFG00020016940 ENSCAFG00020016948 ENSCAFG00020016951 PAX8 (ENSCAFG00020016958) #22 PSD4 (ENSCAFG00020016966) #23 IL1RN (ENSCAFG00020016974) #24 IL1F10 (ENSCAFG00020016977) #25 IL36RN (ENSCAFG00020016986) #26 ENSCAFG00020016992 #27 IL36G (ENSCAFG00020016995) #29 IL1B (ENSCAFG00020017001) ##31 IL1A (ENSCAFG00020017011) CKAP2L (ENSCAFG00020017018) ENSCAFG00020017021 SLC20A1 (ENSCAFG00020017034) CHCHD5 (ENSCAFG00020017362) POLR1B (ENSCAFG00020017367) TTL (ENSCAFG00020017520) ZC3H6 (ENSCAFG00020017525) Red fox MODERN SPECIES 16 EIF2AK3 (ENSVVUG00000028729) ENSVVUG00000028726 IGKC (ENSVVUG00000028725) RPIA (ENSVVUG00000028723) ENSVVUG00000028721 ENSVVUG00000028720 ENSVVUG00000028719 ENSVVUG00000028718 ENSVVUG00000028717 ENSVVUG00000028716 ENSVVUG00000028713 ENSVVUG00000028711 ENSVVUG00000028709 ENSVVUG00000028707 ENSVVUG00000028705 #21 PAX8 (ENSVVUG00000028699) #22 PSD4 (ENSVVUG00000028697) #23 IL1RN (ENSVVUG00000028695) #24 IL1F10 (ENSVVUG00000028694) #25 IL36RN (ENSVVUG00000028692) #26 ENSVVUG00000028691 #27 IL36G (ENSVVUG00000028690) #29 ENSVVUG00000028689 #31 ENSVVUG00000028687 IL1B (ENSVVUG00000028685) ##31 IL1A (ENSVVUG00000028682) CKAP2L (ENSVVUG00000028680) SLC20A1 (ENSVVUG00000028678) CHCHD5 (ENSVVUG00000028674) POLR1B (ENSVVUG00000028670) TTL (ENSVVUG00000028666) Caniformia_b ANCESTRAL SPECIES 11 ENSGT00940000162515 ENSGT00940000154039.a.a.a ENSGT00940000163546 ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.b ENSGT00940000154279.n.b ENSGT00940000153924 ENSGT00940000153048.A ENSGT00940000153770.s.b.a.a.d.a ENSGT00940000154279.n.a.a.b ENSGT00940000153770.s.b.a.a.d.b ENSGT00940000154279.n.a.a.a.a ENSGT00940000153770.s.b.a.a.c ENSGT00940000154413 ENSGT00940000154279.n.a.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 Ursidae ANCESTRAL SPECIES 9 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153770.s.b.a.a.d.a.b ENSGT00940000153094.o.b ENSGT00940000163546 ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.b ENSGT00940000153770.s.b.a.a.c ENSGT00940000154413 ENSGT00940000154279.n.a.a.b.a ENSGT00940000162515 ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 Ursus ANCESTRAL SPECIES 76 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000164409 ENSGT00940000157396 American black bear MODERN SPECIES 1054 ENSUAMG00000019772 ENSUAMG00000019770 PAX8 (ENSUAMG00000019768) #22 PSD4 (ENSUAMG00000019767) #23 IL1RN (ENSUAMG00000019766) #24 IL1F10 (ENSUAMG00000019764) #25 Polar bear MODERN SPECIES 223 ENSUMAG00000008341 ENSUMAG00000008345 ENSUMAG00000008347 ENSUMAG00000008352 ENSUMAG00000008364 ENSUMAG00000008367 ENSUMAG00000008368 ENSUMAG00000008372 ENSUMAG00000008373 ENSUMAG00000008376 ENSUMAG00000008378 ENSUMAG00000008380 ENSUMAG00000008382 ENSUMAG00000008384 ENSUMAG00000008387 #21 PAX8 (ENSUMAG00000008437) #22 PSD4 (ENSUMAG00000008469) #23 IL1RN (ENSUMAG00000008485) #24 IL1F10 (ENSUMAG00000008488) #25 ENSUMAG00000008502 #26 ENSUMAG00000008514 #27 IL36G (ENSUMAG00000008523) #29 IL1B (ENSUMAG00000008551) ##31 IL1A (ENSUMAG00000008557) CKAP2L (ENSUMAG00000008573) SLC20A1 (ENSUMAG00000008606) CHCHD5 (ENSUMAG00000008612) POLR1B (ENSUMAG00000008619) ENSUMAG00000008662 ZC3H6 (ENSUMAG00000008663) ZC3H8 (ENSUMAG00000008665) Giant Panda MODERN SPECIES 14 ENSAMEG00000010027 ENSAMEG00000010035 FABP1 (ENSAMEG00000010057) THNSL2 (ENSAMEG00000010070) FOXI3 (ENSAMEG00000025875) TEX37 (ENSAMEG00000010087) EIF2AK3 (ENSAMEG00000010091) RPIA (ENSAMEG00000010143) ENSAMEG00000010166 ENSAMEG00000026065 ENSAMEG00000010176 ENSAMEG00000010185 ENSAMEG00000023778 ENSAMEG00000010650 ENSAMEG00000031242 #21 ENSAMEG00000010662 #22 PSD4 (ENSAMEG00000010689) #23 IL1RN (ENSAMEG00000010701) #24 IL1F10 (ENSAMEG00000023853) #25 IL36RN (ENSAMEG00000030305) #26 ENSAMEG00000024660 #27 IL36G (ENSAMEG00000027640) #29 IL1B (ENSAMEG00000010733) ##31 IL1A (ENSAMEG00000010754) CKAP2L (ENSAMEG00000010767) SLC20A1 (ENSAMEG00000010790) CHCHD5 (ENSAMEG00000019277) POLR1B (ENSAMEG00000010826) TTL (ENSAMEG00000016187) ENSAMEG00000023826 ZC3H6 (ENSAMEG00000016194) Mustelinae ANCESTRAL SPECIES 16 ENSGT00940000153924 ENSGT00940000153094.o.b.b ENSGT00940000154279.n.a.a.a.a.a.a.a.a.b ENSGT00940000154279.n.a.a.a.a.a.a.a.a.a.b ENSGT00940000154279.n.a.a.a.a.a.a.a.b ENSGT00940000153770.s.b.b ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.b ENSGT00940000154413 ENSGT00940000154279.n.a.b ENSGT00940000153770.s.b.a.a.d.b ENSGT00940000154279.n.a.a.a.a.a.b ENSGT00940000153770.s.b.a.a.c.a.b.b ENSGT00940000153770.s.b.a.a.c.a.a ENSGT00940000162515 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 ENSGT00940000161918 Ferret MODERN SPECIES 169 ENSMPUG00000009428 ENSMPUG00000009432 ENSMPUG00000009436 ENSMPUG00000009442 ENSMPUG00000009445 ENSMPUG00000009451 ENSMPUG00000009459 ENSMPUG00000009466 ENSMPUG00000009473 ENSMPUG00000009480 ENSMPUG00000009488 ENSMPUG00000009493 ENSMPUG00000009500 ENSMPUG00000009504 ENSMPUG00000018847 PAX8 (ENSMPUG00000009512) #22 PSD4 (ENSMPUG00000009525) #23 IL1RN (ENSMPUG00000009542) #24 IL1F10 (ENSMPUG00000009549) #25 IL36RN (ENSMPUG00000009572) #26 ENSMPUG00000009595 #27 IL36G (ENSMPUG00000009609) #29 American mink MODERN SPECIES 240 ENSNVIG00000018180 ENSNVIG00000018062 ENSNVIG00000018049 ENSNVIG00000018044 ENSNVIG00000017956 ENSNVIG00000017950 ENSNVIG00000017947 ENSNVIG00000017930 ENSNVIG00000017927 ENSNVIG00000017921 ENSNVIG00000017828 ENSNVIG00000017816 ENSNVIG00000017766 ENSNVIG00000017759 ENSNVIG00000017695 PAX8 (ENSNVIG00000017549) #22 PSD4 (ENSNVIG00000017497) #23 IL1RN (ENSNVIG00000017468) #24 IL1F10 (ENSNVIG00000017441) #25 I36RA (ENSNVIG00000017426) #26 ENSNVIG00000017402 #27 IL36G (ENSNVIG00000017371) #29 IL1B (ENSNVIG00000017345) ##31 IL1A (ENSNVIG00000017331) CKAP2L (ENSNVIG00000017274) SLC20A1 (ENSNVIG00000017240) CHCHD5 (ENSNVIG00000017218) POLR1B (ENSNVIG00000017147) TTL (ENSNVIG00000017125) ZC3H6 (ENSNVIG00000017074) ZC3H8 (ENSNVIG00000017041) Felidae ANCESTRAL SPECIES 3 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153924 ENSGT00940000154279.n.a.c ENSGT00940000153094.o.b ENSGT00940000163546 ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A ENSGT00940000162515.c ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E Cat MODERN SPECIES 2 FABP1 (ENSFCAG00000024250) THNSL2 (ENSFCAG00000005357) FOXI3 (ENSFCAG00000033737) TEX37 (ENSFCAG00000024908) EIF2AK3 (ENSFCAG00000012715) RPIA (ENSFCAG00000007829) IGKV4-1 (ENSFCAG00000029292) ENSFCAG00000041795 ENSFCAG00000041477 ENSFCAG00000050547 #21 ENSFCAG00000043953 ENSFCAG00000043620 ENSFCAG00000039822 ENSFCAG00000050480 ENSFCAG00000043059 PAX8 (ENSFCAG00000009580) #22 PSD4 (ENSFCAG00000009579) #23 IL1RN (ENSFCAG00000043959) #24 IL1F10 (ENSFCAG00000043309) #25 IL36RN (ENSFCAG00000039757) #26 ENSFCAG00000038973 #29 IL1B (ENSFCAG00000005899) ##31 IL1A (ENSFCAG00000008095) ENSFCAG00000032479 CKAP2L (ENSFCAG00000028904) NT5DC4 (ENSFCAG00000002181) SLC20A1 (ENSFCAG00000008093) CHCHD5 (ENSFCAG00000022546) POLR1B (ENSFCAG00000008091) TTL (ENSFCAG00000008090) ENSFCAG00000052086 Panthera ANCESTRAL SPECIES 2 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153924 ENSGT00940000154279.n.a.c.b ENSGT00940000153094.o.b ENSGT00940000154279.n.a.c.a ENSGT00940000163546 ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A.m ENSGT00940000154279.n.a.d ENSGT00940000154039.a.a.a.g ENSGT00940000154039.b ENSGT00940000162515.c ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 Tiger MODERN SPECIES 170 FABP1 (ENSPTIG00000012965) THNSL2 (ENSPTIG00000013281) TEX37 (ENSPTIG00000013796) EIF2AK3 (ENSPTIG00000014277) RPIA (ENSPTIG00000015321) ENSPTIG00000015720 ENSPTIG00000016818 ENSPTIG00000019526 ENSPTIG00000019763 ENSPTIG00000019832 ENSPTIG00000020619 ENSPTIG00000001214 ENSPTIG00000001226 ENSPTIG00000020785 ENSPTIG00000020824 PAX8 (ENSPTIG00000003550) #22 PSD4 (ENSPTIG00000009382) #23 IL1RN (ENSPTIG00000010702) #24 IL1F10 (ENSPTIG00000010829) #25 IL36RN (ENSPTIG00000010885) #26 ENSPTIG00000010969 #27 IL36G (ENSPTIG00000011123) #29 IL1B (ENSPTIG00000011360) ##31 IL1A (ENSPTIG00000011532) CKAP2L (ENSPTIG00000011831) NT5DC4 (ENSPTIG00000012486) SLC20A1 (ENSPTIG00000013065) CHCHD5 (ENSPTIG00000013300) POLR1B (ENSPTIG00000013496) TTL (ENSPTIG00000015635) ZC3H6 (ENSPTIG00000015800) Panthera_a ANCESTRAL SPECIES 1 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000153924 ENSGT00940000154279.n.a.c.b ENSGT00940000153094.o.b ENSGT00940000154279.n.a.c.a ENSGT00940000163546 ENSGT00940000153094.o.a ENSGT00940000153770.s.b.a.a ENSGT00940000153048.A.m ENSGT00940000153094.p ENSGT00940000154039.a.a.a.g ENSGT00940000154039.b ENSGT00940000162515.c ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 leopard MODERN SPECIES FOXI3 (ENSPPRG00000006262) TEX37 (ENSPPRG00000006255) EIF2AK3 (ENSPPRG00000006246) RPIA (ENSPPRG00000006229) ENSPPRG00000006223 ENSPPRG00000006183 ENSPPRG00000020307 ENSPPRG00000006116 ENSPPRG00000006110 ENSPPRG00000006103 ENSPPRG00000006093 ENSPPRG00000006088 ENSPPRG00000020287 ENSPPRG00000006084 ENSPPRG00000020271 PAX8 (ENSPPRG00000006067) #22 PSD4 (ENSPPRG00000005962) #23 IL1RN (ENSPPRG00000005925) #24 IL1F10 (ENSPPRG00000005903) #25 IL36RN (ENSPPRG00000005896) #26 ENSPPRG00000005883 #27 IL36G (ENSPPRG00000005874) #29 IL1B (ENSPPRG00000005855) ##31 IL1A (ENSPPRG00000005848) CKAP2L (ENSPPRG00000005835) NT5DC4 (ENSPPRG00000005817) SLC20A1 (ENSPPRG00000005791) CHCHD5 (ENSPPRG00000005779) POLR1B (ENSPPRG00000005760) TTL (ENSPPRG00000005690) ZC3H6 (ENSPPRG00000005673) Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00940000162565 ENSGT00940000156114 ENSGT00940000155135 ENSGT00940000158503 ENSGT00940000162575 ENSGT00390000012177 ENSGT00940000158121 ENSGT00390000004352 ENSGT00940000163478 ENSGT00940000153094 ENSGT00940000153770.s.b.a.b ENSGT00940000153770.s.b.a.a ENSGT00940000154279 ENSGT00940000154039.a.a.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Equus ANCESTRAL SPECIES 7 ENSGT00940000153770.s.b.a.b.a ENSGT00940000153094.r.b.a ENSGT00940000153770.s.b.a.a ENSGT00940000154279.o ENSGT00940000153094.r.b.b ENSGT00940000154413 ENSGT00940000153924 ENSGT00940000163546 ENSGT00940000154279.p.a ENSGT00840000130051 ENSGT00940000164053 ENSGT00940000154279.p.b.b ENSGT00940000154279.p.b.a ENSGT00940000154039.a.a.a ENSGT00940000154869.b.b #21 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.a #28 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B Horse MODERN SPECIES 6 ENSECAG00000037657 ENSECAG00000028899 ENSECAG00000028533 ENSECAG00000001923 ENSECAG00000024010 ENSECAG00000022943 ENSECAG00000022590 ENSECAG00000021556 ENSECAG00000037550 ENSECAG00000019614 IGKV5-2 (ENSECAG00000019048) ENSECAG00000033924 ENSECAG00000028513 ENSECAG00000001096 ENSECAG00000050805 #21 PAX8 (ENSECAG00000009244) #22 PSD4 (ENSECAG00000022660) #23 IL1RN (ENSECAG00000027864) #24 IL1F10 (ENSECAG00000021901) #25 IL36RN (ENSECAG00000020486) #26 IL36A (ENSECAG00000017738) #28 IL36G (ENSECAG00000059103) #29 ENSECAG00000030459 #31 IL37 (ENSECAG00000015732) #31 IL1B (ENSECAG00000000051) ##31 IL1A (ENSECAG00000023727) CKAP2L (ENSECAG00000021538) NT5DC4 (ENSECAG00000009226) SLC20A1 (ENSECAG00000014112) CHCHD5 (ENSECAG00000026826) ENSECAG00000011389 Donkey MODERN SPECIES 26 ENSEASG00005006583 ENSEASG00005006577 ENSEASG00005006574 ENSEASG00005028885 ENSEASG00005035938 ENSEASG00005038382 ENSEASG00005024355 ENSEASG00005006561 ENSEASG00005006559 ENSEASG00005034665 ENSEASG00005006554 ENSEASG00005034047 ENSEASG00005036546 ENSEASG00005006546 ENSEASG00005006545 ENSEASG00005029790 #22 PSD4 (ENSEASG00005006540) #23 IL1RN (ENSEASG00005006539) #24 IL1F10 (ENSEASG00005028710) #25 IL36RN (ENSEASG00005029635) #26 ENSEASG00005037741 #27 IL36A (ENSEASG00005006530) #28 IL36G (ENSEASG00005035587) #29 ENSEASG00005031462 #31 ENSEASG00005026035 #31 ENSEASG00005006522 ##31 ENSEASG00005032473 ##31 ENSEASG00005030429 ##31 IL1A (ENSEASG00005006521) CKAP2L (ENSEASG00005006518) NT5DC4 (ENSEASG00005006510) Chiroptera ANCESTRAL SPECIES 47 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.a.a.b #29 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 Megabat MODERN SPECIES 6295 ENSPVAG00000005667 PAX8 (ENSPVAG00000005666) #22 PSD4 (ENSPVAG00000005662) #23 Microchiroptera ANCESTRAL SPECIES 56 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.b #27 ENSGT00950000182943.kb.b.b.b #31 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00390000014879.c.a ENSGT00390000007919 ENSGT00950000183132.B ENSGT00940000161907 ENSGT00940000157396 ENSGT00940000161918 Greater horseshoe bat MODERN SPECIES 58 ARID5A (ENSRFEG00010018404) KANSL3 (ENSRFEG00010018479) ENSRFEG00010018533 LMAN2L (ENSRFEG00010018703) CNNM4 (ENSRFEG00010018761) CNNM3 (ENSRFEG00010018856) ANKRD23 (ENSRFEG00010018904) ANKRD39 (ENSRFEG00010018957) SEMA4C (ENSRFEG00010018982) ENSRFEG00010019109 ENSRFEG00010019144 ACTR1B (ENSRFEG00010019175) ZAP70 (ENSRFEG00010019398) TMEM131 (ENSRFEG00010019449) VWA3B (ENSRFEG00010019495) PAX8 (ENSRFEG00010019605) #22 PSD4 (ENSRFEG00010019691) #23 IL1RN (ENSRFEG00010019717) #24 ENSRFEG00010019750 #27 Microbat MODERN SPECIES 1389 RMND5A (ENSMLUG00000006683) ENSMLUG00000003561 KRCC1 (ENSMLUG00000012471) SMYD1 (ENSMLUG00000012473) FABP1 (ENSMLUG00000012480) ENSMLUG00000003089 PAX8 (ENSMLUG00000011936) #22 PSD4 (ENSMLUG00000011914) #23 IL1RN (ENSMLUG00000011906) #24 ENSMLUG00000011779 IL1F10 (ENSMLUG00000011898) #25 IL36RN (ENSMLUG00000025221) #26 ENSMLUG00000011895 #27 ENSMLUG00000024015 #27 IL37 (ENSMLUG00000024209) #31 IL1B (ENSMLUG00000009941) ##31 IL1A (ENSMLUG00000000166) CKAP2L (ENSMLUG00000000162) SLC20A1 (ENSMLUG00000000529) Marsupialia ANCESTRAL SPECIES 17 ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.a.a ENSGT00940000153770.s.b.c.b.a.a ENSGT00940000153770.s.b.c.a.a.a.a ENSGT00940000153770.s.b.c.b.a.b.a ENSGT00940000153770.s.b.d ENSGT00940000154413 ENSGT00940000153770.s.b.c.a.b ENSGT00940000153924 ENSGT00940000153770.s.b.c.b.a.b.b.a ENSGT00940000153770.s.b.c.a.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.a.a.b ENSGT01100000263534.b.k.a.a.b.b.v.a.b ENSGT00950000182890.D.c.a.a.b.a.a.b.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.c.b #29 ENSGT00950000182943.kb.b.b.a.d.a #29 ENSGT00950000182943.kb.b.b.a.c.a.a #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000154390.A.j ENSGT00940000160915 Marsupialia_b ANCESTRAL SPECIES 19 ENSGT00390000017980.pb ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.a.a ENSGT00940000153770.s.b.c.b.a.a ENSGT00940000153924 ENSGT00940000153770.s.b.c.b.a.b.b.a ENSGT00940000153770.s.b.c.a.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.a.a.b ENSGT00940000153770.s.b.c.a.a.a.a ENSGT00940000153770.s.b.c.b.a.b.a ENSGT00950000182890.D.c.b.a.a.b.b.a.d.b.b ENSGT01100000263534.b.k.a.a.b.b.v.a.b ENSGT00950000182890.D.c.a.a.b.a.a.b.a ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.c.b #29 ENSGT00950000182943.kb.b.b.a.d.a #29 ENSGT00950000182943.kb.b.b.a.c.a.a #29 ENSGT00950000182943.jb ##31 ENSGT00390000013353 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000154390.A.j ENSGT00940000160915.a Diprotodontia ANCESTRAL SPECIES 13 ENSGT00940000153770.s.b.c.a.b ENSGT00940000154869.b.b.o.a #21 ENSGT00940000153770.r.b.a ENSGT00390000017980.pb ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.a.a.b ENSGT00950000182890.D.c.b.a.b.b.a.a.a.a.b.b ENSGT00940000153770.s.b.d.d.a ENSGT00940000153770.s.b.c.a.a.a.a ENSGT00940000153770.s.b.c.b.a.a ENSGT00940000153924 ENSGT00940000153770.s.b.c.b.a.b.b.a ENSGT00940000153770.s.b.c.a.a.b ENSGT00950000182890.D.c.b.a.a.b.b.a.d.b.b ENSGT01100000263534.b.k.a.a.b.b.v.a.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.c.b #29 ENSGT00950000182943.kb.b.b.a.d.a #29 ENSGT00950000182943.kb.b.b.a.c.a.a #29 ENSGT00950000182943.jb ##31 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000154390.A.j ENSGT00940000160915.a ENSGT00940000156732 Diprotodontia_a ANCESTRAL SPECIES 14 ENSGT00940000153770.s.b.c.b.a.b.b.a ENSGT00940000153770.s.b.c.a.a.b ENSGT00950000182890.D.c.b.a.a.b.b.a.d.b.b ENSGT01100000263534.b.k.a.a.b.b.v.a.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b.a #24 ENSGT00950000182943.kb.b.a.b.b.b #25 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.b.a.c.b #29 ENSGT00950000182943.kb.b.b.a.d.a #29 ENSGT00950000182943.kb.b.b.a.c.a.a.a #29 ENSGT00950000182943.kb.b.b.a.c.a.a.b.a #29 ENSGT00950000182943.jb ##31 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000154390.A.j ENSGT00940000160915.a koala MODERN SPECIES 146 ENSPCIG00000035251 #21 ENSPCIG00000033925 #21 ENSPCIG00000036791 ENSPCIG00000005738 ENSPCIG00000004816 ENSPCIG00000034315 ENSPCIG00000002592 ENSPCIG00000035121 ENSPCIG00000022355 PAX8 (ENSPCIG00000025722) #22 PSD4 (ENSPCIG00000004140) #23 ENSPCIG00000034951 #24 IL1F10 (ENSPCIG00000032584) #25 IL36RN (ENSPCIG00000031417) #26 ENSPCIG00000019853 #29 ENSPCIG00000033104 #29 ENSPCIG00000005687 #29 ENSPCIG00000035147 #29 ENSPCIG00000013144 #29 ENSPCIG00000019173 ##31 ENSPCIG00000036262 NT5DC4 (ENSPCIG00000000629) SLC20A1 (ENSPCIG00000000596) MRPS24 (ENSPCIG00000019201) URGCP (ENSPCIG00000019203) Common wonbat MODERN SPECIES 1155 ENSVURG00010020734 ENSVURG00010020739 ENSVURG00010020763 ENSVURG00010020767 ENSVURG00010020770 ENSVURG00010020773 ENSVURG00010020776 ENSVURG00010020777 ENSVURG00010020780 ENSVURG00010020783 ENSVURG00010020788 ENSVURG00010020792 ENSVURG00010020796 PAX8 (ENSVURG00010020807) #22 PSD4 (ENSVURG00010020854) #23 IL1RN (ENSVURG00010020858) #24 IL1F10 (ENSVURG00010020861) #25 IL36RN (ENSVURG00010020862) #26 ENSVURG00010020868 #29 ENSVURG00010020870 #29 ENSVURG00010020875 #29 Wallaby MODERN SPECIES 3272 ENSMEUG00000013983 #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000021873 ENSSHAG00000025006 ENSSHAG00000000587 ENSSHAG00000026333 ENSSHAG00000002299 ENSSHAG00000025307 ENSSHAG00000027406 ENSSHAG00000000046 ENSSHAG00000021198 ENSSHAG00000024402 ENSSHAG00000022846 ENSSHAG00000029118 ENSSHAG00000024746 ENSSHAG00000024467 ENSSHAG00000022622 ENSSHAG00000027887 #22 PSD4 (ENSSHAG00000011461) #23 ENSSHAG00000028511 #24 IL1F10 (ENSSHAG00000024364) #25 ENSSHAG00000010571 #26 ENSSHAG00000010472 #29 ENSSHAG00000027329 #29 ENSSHAG00000008907 ##31 ENSSHAG00000008360 ENSSHAG00000007933 ENSSHAG00000024240 NT5DC4 (ENSSHAG00000007640) ENSSHAG00000031402 ENSSHAG00000020918 ENSSHAG00000005460 UBE2D4 (ENSSHAG00000024831) Opossum MODERN SPECIES ENSMODG00000047600 ENSMODG00000013078 ENSMODG00000050568 ENSMODG00000048189 ENSMODG00000038872 ENSMODG00000040195 ENSMODG00000015028 ENSMODG00000041448 ENSMODG00000013304 ENSMODG00000043707 ENSMODG00000041386 ENSMODG00000049183 ENSMODG00000041607 ENSMODG00000051252 ENSMODG00000013749 PAX8 (ENSMODG00000013770) #22 ENSMODG00000013780 #23 IL1RN (ENSMODG00000013787) #24 IL1F10 (ENSMODG00000013791) #25 IL36RN (ENSMODG00000013795) #26 ENSMODG00000036976 #29 ENSMODG00000037505 #29 ENSMODG00000013799 #29 ENSMODG00000013803 #29 ENSMODG00000013808 #29 ENSMODG00000013815 ##31 ENSMODG00000013821 ENSMODG00000013858 NT5DC4 (ENSMODG00000013862) SLC20A1 (ENSMODG00000013886) ENSMODG00000013889 Platypus MODERN SPECIES 2 ENSOANG00000050667 CNNM3 (ENSOANG00000012493) RETSAT (ENSOANG00000012616) ELMOD3 (ENSOANG00000001113) CAPG (ENSOANG00000001114) ENSOANG00000044668 MAT2A (ENSOANG00000041477) GGCX (ENSOANG00000003061) VAMP8 (ENSOANG00000050900) ENSOANG00000001769 ENSOANG00000040133 TMEM150A (ENSOANG00000001771) ENSOANG00000036633 USP39 (ENSOANG00000008860) ENSOANG00000008859 PAX8 (ENSOANG00000010554) #22 ENSOANG00000010553 #23 IL1RN (ENSOANG00000010552) #24 IL1F10 (ENSOANG00000010551) #25 ENSOANG00000041011 #31 ENSOANG00000041181 #31 ENSOANG00000010549 #26 ENSOANG00000040315 #31 ENSOANG00000010547 #31 ENSOANG00000010546 ##31 ENSOANG00000005197 ENSOANG00000044856 ENSOANG00000011171 NT5DC4 (ENSOANG00000012006) SLC20A1 (ENSOANG00000003390) ENSOANG00000037773 Sauria ANCESTRAL SPECIES 27 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 ENSGT00950000182943.kb.b.a.a ##31 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a Lepidosauria ANCESTRAL SPECIES 20 ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 ENSGT00950000182943.kb.b.a.a ##31 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a tuatara MODERN SPECIES 704 NFRKB (ENSSPUG00000001270) PRDM10 (ENSSPUG00000001178) APLP2 (ENSSPUG00000001142) TMEM45B (ENSSPUG00000001098) BARX2 (ENSSPUG00000001087) ENSSPUG00000001077 ARHGAP32 (ENSSPUG00000001031) KCNJ5 (ENSSPUG00000001017) FLI1 (ENSSPUG00000000976) ETS1 (ENSSPUG00000000956) VAMP5 (ENSSPUG00000000952) RNF181 (ENSSPUG00000000945) TMEM150A (ENSSPUG00000000942) C2orf68 (ENSSPUG00000000938) USP39 (ENSSPUG00000000888) PAX8 (ENSSPUG00000000846) #22 PSD4 (ENSSPUG00000000840) #23 ENSSPUG00000000834 ENSSPUG00000000825 IL36RN (ENSSPUG00000000818) #26 ENSSPUG00000000811 #25 TMED4 (ENSSPUG00000000791) DDX56 (ENSSPUG00000000784) NPC1L1 (ENSSPUG00000000641) MRPS24 (ENSSPUG00000000628) SLC20A1 (ENSSPUG00000000609) NT5DC4 (ENSSPUG00000000379) CKAP2L (ENSSPUG00000000352) ENSSPUG00000000345 ##31 OGDH (ENSSPUG00000000282) ENSSPUG00000000087 Episquamata ANCESTRAL SPECIES 41 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 Laterata ANCESTRAL SPECIES 77 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 Common wall lizard MODERN SPECIES 16 ENSPMRG00000008437 BRAP (ENSPMRG00000007966) ATXN2 (ENSPMRG00000007951) SH2B3 (ENSPMRG00000007942) PHETA1 (ENSPMRG00000007937) CUX2 (ENSPMRG00000007910) MYL2 (ENSPMRG00000007898) ENSPMRG00000007890 ENSPMRG00000007883 HVCN1 (ENSPMRG00000012511) ENSPMRG00000012506 ENSPMRG00000012499 PPTC7 (ENSPMRG00000012489) RAD9B (ENSPMRG00000012471) ENSPMRG00000012460 PAX8 (ENSPMRG00000012447) #22 ENSPMRG00000012430 #23 ENSPMRG00000012417 #23 ENSPMRG00000012405 #25 TMED4 (ENSPMRG00000012400) DDX56 (ENSPMRG00000012390) ENSPMRG00000012386 ENSPMRG00000012384 NPC1L1 (ENSPMRG00000012375) MRPS24 (ENSPMRG00000012371) ENSPMRG00000012368 SLC20A1 (ENSPMRG00000012354) NT5DC4 (ENSPMRG00000012344) ENSPMRG00000012338 ENSPMRG00000012332 ##31 ENSPMRG00000012323 Archelosauria ANCESTRAL SPECIES 29 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B Cryptodira ANCESTRAL SPECIES 30 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 ENSGT00950000182943.kb.b.a.a.a ##31 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a Testudinoidea ANCESTRAL SPECIES ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992.j ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 ENSGT00950000182943.kb.b.a.a.b ##31 ENSGT01000000217133 ENSGT00950000182943.kb.b.a.a.a ##31 Testudinidae ANCESTRAL SPECIES 55 ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992.j ENSGT00940000161711 ENSGT00610000087417.b ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.kb.a ##31 ENSGT00950000182943.kb.b.a.a.b ##31 ENSGT01000000217133 ENSGT00950000182943.kb.b.a.a.a ##31 ENSGT00950000183125.b.a.a Abingdon island giant tortoise MODERN SPECIES 1500 ENSCABG00000012172 ENSCABG00000012174 ENSCABG00000012175 POLM (ENSCABG00000012176) ENSCABG00000012177 ENSCABG00000012178 MAT2A (ENSCABG00000012179) GGCX (ENSCABG00000012180) VAMP8 (ENSCABG00000012184) RNF181 (ENSCABG00000012185) TMEM150A (ENSCABG00000012187) C2orf68 (ENSCABG00000012211) USP39 (ENSCABG00000012212) SFTPB (ENSCABG00000012215) ENSCABG00000012216 PAX8 (ENSCABG00000012219) #22 PSD4 (ENSCABG00000012224) #23 IL36RN (ENSCABG00000012226) #26 ENSCABG00000012232 #25 TMED4 (ENSCABG00000012313) DDX56 (ENSCABG00000012315) NPC1L1 (ENSCABG00000012319) MRPS24 (ENSCABG00000012408) SLC20A1 (ENSCABG00000012411) NT5DC4 (ENSCABG00000012414) CKAP2L (ENSCABG00000012421) ENSCABG00000012433 ##31 Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005001539 POLM (ENSGEVG00005001484) ENSGEVG00005001433 MAT2A (ENSGEVG00005001405) GGCX (ENSGEVG00005001392) ENSGEVG00005001383 VAMP8 (ENSGEVG00005001371) VAMP5 (ENSGEVG00005001359) RNF181 (ENSGEVG00005001346) TMEM150A (ENSGEVG00005001337) C2orf68 (ENSGEVG00005001327) USP39 (ENSGEVG00005001305) SFTPB (ENSGEVG00005001278) ENSGEVG00005001267 ENSGEVG00005001256 PAX8 (ENSGEVG00005001218) #22 PSD4 (ENSGEVG00005001176) #23 IL36RN (ENSGEVG00005001146) #26 ENSGEVG00005001125 #25 TMED4 (ENSGEVG00005001113) DDX56 (ENSGEVG00005001091) NPC1L1 (ENSGEVG00005001011) MRPS24 (ENSGEVG00005000963) SLC20A1 (ENSGEVG00005000937) NT5DC4 (ENSGEVG00005000883) CKAP2L (ENSGEVG00005000846) ENSGEVG00005000819 ##31 ENSGEVG00005000805 ##31 ENSGEVG00005000795 ##31 OGDH (ENSGEVG00005000746) ZMIZ2 (ENSGEVG00005000698) Emydidae ANCESTRAL SPECIES ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000158490 ENSGT00940000165439 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992.j ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ##31 ENSGT00950000182943.kb.a ##31 ENSGT00950000182943.kb.b.a.a.b ##31 ENSGT01000000217133 ENSGT00950000182943.kb.b.a.a.a ##31 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 17 ENSTMTG00000000788 ENSTMTG00000000775 ENSTMTG00000000767 ENSTMTG00000000686 ENSTMTG00000000626 ENSTMTG00000000613 ENSTMTG00000000585 ENSTMTG00000000568 ENSTMTG00000000554 ENSTMTG00000000538 ENSTMTG00000000453 ENSTMTG00000000440 ENSTMTG00000000419 ENSTMTG00000000400 ENSTMTG00000000379 ENSTMTG00000000294 #22 ENSTMTG00000000239 #23 ENSTMTG00000000194 #23 ENSTMTG00000000156 #25 ENSTMTG00000000139 ENSTMTG00000000120 ENSTMTG00000000101 ENSTMTG00000000065 ENSTMTG00000014939 ENSTMTG00000014875 ENSTMTG00000014823 ##31 ENSTMTG00000014804 ##31 ENSTMTG00000014794 ENSTMTG00000014775 ##31 ENSTMTG00000014708 ENSTMTG00000013090 Three-toed box turtle MODERN SPECIES 18 ENSTMTG00000003420 H2AZ2 (ENSTMTG00000003395) ENSTMTG00000003373 ENSTMTG00000003188 ENSTMTG00000003150 ENSTMTG00000003135 ENSTMTG00000003123 ENSTMTG00000003103 ENSTMTG00000003097 ENSTMTG00000003088 RNF181 (ENSTMTG00000003075) ENSTMTG00000003064 ENSTMTG00000003052 ENSTMTG00000003042 ENSTMTG00000003023 ENSTMTG00000002983 #22 ENSTMTG00000002971 #23 ENSTMTG00000002968 #25 ENSTMTG00000002962 ENSTMTG00000002958 ENSTMTG00000002948 ENSTMTG00000002943 ENSTMTG00000002931 ENSTMTG00000002905 ENSTMTG00000002886 ##31 ENSTMTG00000002880 ##31 ENSTMTG00000002875 ENSTMTG00000002866 ##31 ENSTMTG00000002843 ENSTMTG00000002817 ENSTMTG00000002811 painted turtle MODERN SPECIES 877 POLM (ENSCPBG00000023227) ENSCPBG00000023230 ENSCPBG00000023231 MAT2A (ENSCPBG00000023233) GGCX (ENSCPBG00000023234) VAMP8 (ENSCPBG00000023235) VAMP5 (ENSCPBG00000023236) RNF181 (ENSCPBG00000023237) TMEM150A (ENSCPBG00000023238) C2orf68 (ENSCPBG00000023240) ENSCPBG00000023241 USP39 (ENSCPBG00000023242) SFTPB (ENSCPBG00000023243) ENSCPBG00000023244 ENSCPBG00000023245 PAX8 (ENSCPBG00000023246) #22 PSD4 (ENSCPBG00000023247) #23 IL36RN (ENSCPBG00000023248) #26 ENSCPBG00000023249 #25 ENSCPBG00000023250 ##31 ENSCPBG00000023252 ##31 ENSCPBG00000023255 ##31 CKAP2L (ENSCPBG00000023258) NT5DC4 (ENSCPBG00000023262) Chinese turtle MODERN SPECIES 419 PAX8 (ENSPSIG00000012152) #22 ENSPSIG00000012125 #23 Archosauria ANCESTRAL SPECIES 38 ENSGT00940000155596 ENSGT00940000156317 ENSGT00940000160547 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00940000158490 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00730000111371 ENSGT00940000176261 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000161976 #23 ENSGT00950000182943.kb.b.a.b.a #26 ENSGT00950000182943.kb.b.a.b.b #25 ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.kb.a ##31 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00940000158444 Australian saltwater crocodile MODERN SPECIES 51 POLB (ENSCPRG00005000434) SEMA4C (ENSCPRG00005000404) PURB (ENSCPRG00005000388) H2AZ2 (ENSCPRG00005000382) ENSCPRG00005000376 POLM (ENSCPRG00005000370) MAT2A (ENSCPRG00005000252) GGCX (ENSCPRG00005000222) VAMP8 (ENSCPRG00005000205) VAMP5 (ENSCPRG00005000186) TMEM150A (ENSCPRG00005000180) ENSCPRG00005000164 C2orf68 (ENSCPRG00005000155) USP39 (ENSCPRG00005000146) ENSCPRG00005000142 PAX8 (ENSCPRG00005000129) #22 PSD4 (ENSCPRG00005000116) #23 ENSCPRG00005000111 #25 ARID5A (ENSCPRG00005000102) KANSL3 (ENSCPRG00005000078) ENSCPRG00005000053 ENSCPRG00005000051 LMAN2L (ENSCPRG00005000049) CNNM4 (ENSCPRG00005000048) ENSCPRG00005016634 TET3 (ENSCPRG00005016623) ENSCPRG00005016603 MOB1A (ENSCPRG00005016590) ENSCPRG00005016587 SLC4A5 (ENSCPRG00005016505) ENSCPRG00005016482 Anura ANCESTRAL SPECIES 30 ENSGT00940000159885 ENSGT00390000011010.a.a ENSGT00940000164226 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000158490 ENSGT00940000162822 ENSGT00950000183185.c.a.a ENSGT00390000014909 ENSGT00940000160325.b ENSGT00940000160552 ENSGT01030000234578.A.b.a.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00950000182943 #31 ENSGT01070000257222 ENSGT00530000063691.a ENSGT00940000162631 ENSGT00390000014879.c.a ENSGT00390000011179 ENSGT00940000158973.b ENSGT00940000158444 ENSGT00940000166166 ENSGT00950000182926.b.c ENSGT00940000156008.pb.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 Frog MODERN SPECIES 3 ENSXETG00000038856 cox5b.1 (ENSXETG00000001255) npy4r (ENSXETG00000033678) otud3 (ENSXETG00000001258) polm (ENSXETG00000001259) ENSXETG00000001257 sh2d6 (ENSXETG00000037696) tfap2b (ENSXETG00000001263) ggcx (ENSXETG00000001264) vamp8 (ENSXETG00000001266) tmem150a (ENSXETG00000036936) ENSXETG00000040066 c2orf68 (ENSXETG00000025802) usp39 (ENSXETG00000001269) sftpb (ENSXETG00000032549) pax8 (ENSXETG00000001272) #22 psd4 (ENSXETG00000001273) il1b (ENSXETG00000001276) #31 ENSXETG00000041287 ENSXETG00000041755 ckap2l (ENSXETG00000041090) nt5dc4 (ENSXETG00000018955) slc20a1 (ENSXETG00000018957) mrps24 (ENSXETG00000018967) camk2b (ENSXETG00000018971) nudcd3 (ENSXETG00000018972) ENSXETG00000039060 pgam2 (ENSXETG00000018980) ENSXETG00000036135 ppia (ENSXETG00000018981) zmiz2 (ENSXETG00000018991) Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000004425 H2AZ2 (ENSLLEG00000004452) ENSLLEG00000004486 ENSLLEG00000004521 GGCX (ENSLLEG00000004549) MAT2A (ENSLLEG00000004628) VAMP8 (ENSLLEG00000004650) ENSLLEG00000004663 ENSLLEG00000004671 ENSLLEG00000004685 RNF181 (ENSLLEG00000004704) TMEM150A (ENSLLEG00000004725) C2orf68 (ENSLLEG00000004733) USP39 (ENSLLEG00000004769) ENSLLEG00000004871 PAX8 (ENSLLEG00000004912) #22 ENSLLEG00000004966 #23 ENSLLEG00000005004 ENSLLEG00000005060 ENSLLEG00000005078 #31 ENSLLEG00000005103 ENSLLEG00000005133 #31 ENSLLEG00000005192 #31 CKAP2L (ENSLLEG00000005273) NT5DC4 (ENSLLEG00000005378) SLC20A1 (ENSLLEG00000005530) MRPS24 (ENSLLEG00000005619) CAMK2B (ENSLLEG00000005795) ENSLLEG00000007205 NUDCD3 (ENSLLEG00000007221) ENSLLEG00000007253 Coelacanth MODERN SPECIES 244 PAX8 (ENSLACG00000003762) #22 ENSLACG00000006615 ENSLACG00000008987 NT5DC4 (ENSLACG00000009174) SLC20A1 (ENSLACG00000010827) ENSLACG00000011344 MRPS24 (ENSLACG00000011763) CAMK2B (ENSLACG00000012089) NUDCD3 (ENSLACG00000014354) ENSLACG00000014763 PGAM2 (ENSLACG00000015180) ENSLACG00000015459 ZMIZ2 (ENSLACG00000015641) ENSLACG00000016571 ENSLACG00000016676 HK2 (ENSLACG00000016947) Actinopterygii ANCESTRAL SPECIES 906 ENSGT00940000161868 #22 ENSGT00940000161976 #23 Reedfish MODERN SPECIES ENSECRG00000000158 ENSECRG00000000159 ENSECRG00000000160 vdac3 (ENSECRG00000000161) ikbkb (ENSECRG00000000162) PLAT (ENSECRG00000000163) ap3m2 (ENSECRG00000000164) ENSECRG00000000165 KAT6A (ENSECRG00000000166) sema4c (ENSECRG00000000167) CNNM3 (ENSECRG00000000168) CNNM4 (ENSECRG00000000169) lman2lb (ENSECRG00000000170) ENSECRG00000000171 ENSECRG00000000172 PAX8 (ENSECRG00000000173) #22 ENSECRG00000000174 ENSECRG00000000175 #31 ENSECRG00000000176 purbb (ENSECRG00000000177) h2az2a (ENSECRG00000000178) ENSECRG00000000179 ENSECRG00000000180 polm (ENSECRG00000000181) gnsb (ENSECRG00000000182) ENSECRG00000000183 ZMIZ2 (ENSECRG00000000184) camk2b1 (ENSECRG00000000185) OGDH (ENSECRG00000000186) ENSECRG00000000187 ENSECRG00000000188 Neopterygii ANCESTRAL SPECIES 188 ENSGT00940000161102 ENSGT00940000156317 ENSGT00940000155596 ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00950000182943 #31 ENSGT00530000063691.a ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00940000166629 ENSGT00940000158490 ENSGT00940000165439 ENSGT00950000182924.A.b.b ENSGT00390000011179 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00950000183125.b.a.a ENSGT00390000003652.d ENSGT01030000234539.b.b.a Spotted gar MODERN SPECIES 647 ciao1 (ENSLOCG00000015205) tmem127 (ENSLOCG00000015207) STARD7 (ENSLOCG00000015208) GGCX (ENSLOCG00000015209) mat2ab (ENSLOCG00000015213) usp39 (ENSLOCG00000015215) ENSLOCG00000015217 mpx (ENSLOCG00000015220) ebf2 (ENSLOCG00000015225) ank1a (ENSLOCG00000015227) CNNM3 (ENSLOCG00000015245) CNNM4 (ENSLOCG00000015250) lman2la (ENSLOCG00000015252) wbp1 (ENSLOCG00000015254) arl3b (ENSLOCG00000015256) PAX8 (ENSLOCG00000015261) #22 ENSLOCG00000015264 ENSLOCG00000015267 ENSLOCG00000015271 purbb (ENSLOCG00000015273) h2az2b (ENSLOCG00000015274) polm (ENSLOCG00000015276) gnsb (ENSLOCG00000015279) ZMIZ2 (ENSLOCG00000015282) ENSLOCG00000015289 OGDH (ENSLOCG00000015292) camk2b1 (ENSLOCG00000015299) nudcd3 (ENSLOCG00000015304) mrps24 (ENSLOCG00000015305) ENSLOCG00000015308 ENSLOCG00000015311 Osteoglossocephalai ANCESTRAL SPECIES 324 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00940000154308.C Clupeocephala ANCESTRAL SPECIES 4 ENSGT00940000155434 ENSGT00940000155178 ENSGT00940000155591.i ENSGT00940000159729 ENSGT00390000014476 ENSGT00940000160428.b.b ENSGT00940000179483 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00390000016127 ENSGT00940000164889 Otomorpha ANCESTRAL SPECIES 40 ENSGT00390000001761 ENSGT00940000165981 ENSGT00530000064123.g ENSGT00390000004524 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Clupeiformes ANCESTRAL SPECIES 3 ENSGT00940000156744.p ENSGT00940000161616.c ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155434 ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Denticle herring MODERN SPECIES 13 ASS1 (ENSDCDG00000003503) fubp3 (ENSDCDG00000003578) PRDM12 (ENSDCDG00000003860) exosc2 (ENSDCDG00000003865) ABL1 (ENSDCDG00000003881) ENSDCDG00000003902 ddx54 (ENSDCDG00000003941) tbx5a (ENSDCDG00000004659) tbx3a (ENSDCDG00000004670) MED13L (ENSDCDG00000004883) ENSDCDG00000015666 MTFP1 (ENSDCDG00000015673) lman2la (ENSDCDG00000015676) wbp1 (ENSDCDG00000015680) ARL3 (ENSDCDG00000015681) PAX8 (ENSDCDG00000015684) #22 ENSDCDG00000015697 ENSDCDG00000015707 ENSDCDG00000015722 zmynd19 (ENSDCDG00000015734) bspry (ENSDCDG00000015741) coq4 (ENSDCDG00000015746) ENSDCDG00000015756 fbxw5 (ENSDCDG00000015782) ENSDCDG00000015790 alad (ENSDCDG00000015836) tmem203 (ENSDCDG00000016555) ENSDCDG00000016559 ssna1 (ENSDCDG00000016564) anapc2 (ENSDCDG00000016573) ENSDCDG00000016655 Atlantic herring MODERN SPECIES 3 fubp3 (ENSCHAG00000010803) PRDM12 (ENSCHAG00000010752) exosc2 (ENSCHAG00000010731) ABL1 (ENSCHAG00000010052) ENSCHAG00000010000 ENSCHAG00000009974 ddx54 (ENSCHAG00000007106) tbx5a (ENSCHAG00000007003) tbx3a (ENSCHAG00000006952) MED13L (ENSCHAG00000002320) ENSCHAG00000002122 MTFP1 (ENSCHAG00000002108) lman2la (ENSCHAG00000001987) wbp1 (ENSCHAG00000001967) ARL3 (ENSCHAG00000001914) PAX8 (ENSCHAG00000001777) #22 ENSCHAG00000001768 ENSCHAG00000001764 ENSCHAG00000001730 ENSCHAG00000001671 ENSCHAG00000001655 ENSCHAG00000001618 ENSCHAG00000001582 ENSCHAG00000001482 SAPCD2 (ENSCHAG00000001435) tmem141 (ENSCHAG00000001419) zmynd19 (ENSCHAG00000001329) bspry (ENSCHAG00000001291) coq4 (ENSCHAG00000001274) ENSCHAG00000000825 ENSCHAG00000000623 Otophysi ANCESTRAL SPECIES 14 ENSGT00940000158503 ENSGT00940000155135 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Characiphysae ANCESTRAL SPECIES 74 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155434 ENSGT00940000155178 ENSGT00940000155591.i ENSGT00940000159729 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Channel catfish MODERN SPECIES 20 NEU1 (ENSIPUG00000015242) thnsl2 (ENSIPUG00000015261) smyd1 (ENSIPUG00000015286) spra (ENSIPUG00000015366) exosc2 (ENSIPUG00000015397) abl1 (ENSIPUG00000015464) ENSIPUG00000015525 Ddx54 (ENSIPUG00000015556) tbx5a (ENSIPUG00000015736) tbx3 (ENSIPUG00000015749) med13l (ENSIPUG00000015779) ENSIPUG00000015882 mtfp1 (ENSIPUG00000015900) lman2l (ENSIPUG00000015914) wbp1 (ENSIPUG00000015925) pax8 (ENSIPUG00000015952) #22 ENSIPUG00000015992 znf596 (ENSIPUG00000016009) sapcd2 (ENSIPUG00000016069) tmem141 (ENSIPUG00000016086) zmynd19 (ENSIPUG00000016166) bspry (ENSIPUG00000016180) coq4 (ENSIPUG00000016212) traf2 (ENSIPUG00000016229) FBXW5 (ENSIPUG00000016258) ENSIPUG00000016323 Alad (ENSIPUG00000016331) tmem203 (ENSIPUG00000016378) ENSIPUG00000016381 SSNA1 (ENSIPUG00000016396) Anapc2 (ENSIPUG00000016422) Characiphysae_b ANCESTRAL SPECIES 83 ENSGT00390000004511.c.b.f ENSGT00940000158503 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Characoidei ANCESTRAL SPECIES 39 ENSGT00940000158503 ENSGT00940000155135 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 ENSGT00940000156223 Red-bellied piranha MODERN SPECIES 227 MED13L (ENSPNAG00000004968) ENSPNAG00000026914 MTFP1 (ENSPNAG00000026943) lman2la (ENSPNAG00000027001) wbp1 (ENSPNAG00000027019) ARL3 (ENSPNAG00000004165) PAX8 (ENSPNAG00000027193) #22 ENSPNAG00000006555 ENSPNAG00000004784 ENSPNAG00000027305 tmem141 (ENSPNAG00000027312) zmynd19 (ENSPNAG00000027365) bspry (ENSPNAG00000007017) coq4 (ENSPNAG00000027388) ENSPNAG00000005680 fbxw5 (ENSPNAG00000027480) alad (ENSPNAG00000005817) tmem203 (ENSPNAG00000027558) ENSPNAG00000007100 ssna1 (ENSPNAG00000027592) anapc2 (ENSPNAG00000027606) ENSPNAG00000027783 Mexicana tetra MODERN SPECIES 137 exosc2 (ENSAMXG00000042605) ABL1 (ENSAMXG00000034241) ENSAMXG00000040126 ddx54 (ENSAMXG00000009189) ENSAMXG00000036680 tbx5a (ENSAMXG00000009196) tbx3a (ENSAMXG00000033991) MED13L (ENSAMXG00000009206) ENSAMXG00000029819 MTFP1 (ENSAMXG00000040858) ENSAMXG00000031194 lman2la (ENSAMXG00000009221) wbp1 (ENSAMXG00000043721) ARL3 (ENSAMXG00000034370) ENSAMXG00000009234 PAX8 (ENSAMXG00000009227) #22 ENSAMXG00000035349 ENSAMXG00000038015 tmem141 (ENSAMXG00000036871) zmynd19 (ENSAMXG00000029967) bspry (ENSAMXG00000036206) coq4 (ENSAMXG00000009257) ENSAMXG00000009259 fbxw5 (ENSAMXG00000009281) alad (ENSAMXG00000009307) tmem203 (ENSAMXG00000024888) ENSAMXG00000031408 ssna1 (ENSAMXG00000011832) anapc2 (ENSAMXG00000037697) ENSAMXG00000011882 ENSAMXG00000036580 Electric eel MODERN SPECIES 616 ENSEEEG00000020069 MTFP1 (ENSEEEG00000020070) lman2la (ENSEEEG00000020071) wbp1 (ENSEEEG00000020073) ENSEEEG00000020074 PAX8 (ENSEEEG00000020078) #22 ENSEEEG00000020106 ENSEEEG00000020112 tmem141 (ENSEEEG00000020114) ENSEEEG00000020115 zmynd19 (ENSEEEG00000020116) bspry (ENSEEEG00000020117) coq4 (ENSEEEG00000020118) ENSEEEG00000020120 fbxw5 (ENSEEEG00000020136) ENSEEEG00000020137 alad (ENSEEEG00000020138) ENSEEEG00000020141 Cyprinoidei ANCESTRAL SPECIES 78 ENSGT00940000158503 ENSGT00940000155135 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00550000075100 ENSGT00940000156506.b ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h ENSGT00940000158066.p ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 Zebrafish MODERN SPECIES 20 PAX8 (ENSDARG00000015879) #22 wbp1 (ENSDARG00000098583) lman2la (ENSDARG00000102657) MTFP1 (ENSDARG00000099908) tbx3a (ENSDARG00000002216) tbx5a (ENSDARG00000024894) ddx54 (ENSDARG00000105286) rab14l (ENSDARG00000035188) ABL1 (ENSDARG00000035187) exosc2 (ENSDARG00000028688) spra (ENSDARG00000004406) fabp1a (ENSDARG00000019357) smyd1a (ENSDARG00000009280) thnsl2 (ENSDARG00000032584) oxt (ENSDARG00000042845) DQX1 (ENSDARG00000059455) Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000161868.c #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000161868.c #22 Golden-line barbel MODERN SPECIES 1103 oxt (ENSSGRG00000013538) ABL1 (ENSSGRG00000013225) rab14l (ENSSGRG00000013097) ddx54 (ENSSGRG00000013096) tbx5a (ENSSGRG00000013095) tbx3a (ENSSGRG00000013077) MTFP1 (ENSSGRG00000013074) wbp1 (ENSSGRG00000013072) ENSSGRG00000013070 #22 ENSSGRG00000013069 ENSSGRG00000013067 ENSSGRG00000013063 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 105 ENSGT00940000155135.eb.a.b ENSGT00940000156114.c.i ENSGT00440000033609.w ENSGT00940000153596.B ENSGT00940000153838.a.m ENSGT00940000155178.i.b ENSGT00550000075100.i.b ENSGT00940000156506.b.i.a ENSGT00940000158066.p.h ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h.a ENSGT00390000004019.a ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868.d.a #22 ENSGT00940000155061.b.i ENSGT00940000154308.C ENSGT00940000153594.c.e.a ENSGT00940000154895.a.b ENSGT00950000182988.a.b.b.b ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00640000091486.b ENSGT00940000165960.a.a ENSGT00950000183121.a.c.a ENSGT00390000018418 ENSGT00940000165100.a ENSGT00390000000592.ab ENSGT00940000163503.A.a.a.b ENSGT01030000234571.b.b.a.a.b.e.b.c Goldfish MODERN SPECIES 44 brinp1 (ENSCARG00000035614) smyd1a (ENSCARG00000035505) spra (ENSCARG00000035492) exosc2 (ENSCARG00000035437) ABL1 (ENSCARG00000034989) rab14l (ENSCARG00000034917) tbx5a (ENSCARG00000034876) tbx3a (ENSCARG00000034847) MED13L (ENSCARG00000033392) ENSCARG00000033225 ENSCARG00000033219 MTFP1 (ENSCARG00000033196) lman2la (ENSCARG00000033177) ENSCARG00000033166 ARL3 (ENSCARG00000033157) PAX8 (ENSCARG00000033084) #22 ENSCARG00000033061 ENSCARG00000033043 hip1rb (ENSCARG00000032319) ENSCARG00000032270 ENSCARG00000032261 ENSCARG00000032257 PAK3 (ENSCARG00000032035) ENSCARG00000031974 FZD9 (ENSCARG00000031965) ENSCARG00000031952 tmem150ab (ENSCARG00000031929) slc25a46 (ENSCARG00000031873) wdr36 (ENSCARG00000030494) camk4 (ENSCARG00000028810) kcmf1 (ENSCARG00000028738) Cyprininae_a ANCESTRAL SPECIES 19 ENSGT00940000155135.eb.a.b ENSGT00940000156114.c.i ENSGT00440000033609.w ENSGT00940000153596.B ENSGT00940000153838.a.m ENSGT00940000155178.i.b ENSGT00550000075100.i.b ENSGT00940000156506.b.i.a ENSGT00940000158066.p.h ENSGT00390000013680.a ENSGT01030000234567.A.b.c.h.a ENSGT00390000004019.a ENSGT00940000155596.r ENSGT00950000183109.c.b.b ENSGT00940000155737.a.a ENSGT00940000161868.d.a #22 ENSGT00940000155061.b.i ENSGT01100000263556.a.a.q.c.b.b.a ENSGT00940000153594.c.e.a ENSGT00940000154895.a.b ENSGT00950000182988.a.b.b.b Common carp reference MODERN SPECIES 7 ENSCCRG00000018594 rab14l (ENSCCRG00000018390) ENSCCRG00000017461 ENSCCRG00000069023 ENSCCRG00000026487 tbx5a (ENSCCRG00000035582) tbx3a (ENSCCRG00000026753) ENSCCRG00000068731 MED13L (ENSCCRG00000021719) ENSCCRG00000025913 ENSCCRG00000004407 ENSCCRG00000069573 lman2la (ENSCCRG00000074883) ENSCCRG00000078309 ENSCCRG00000059293 ENSCCRG00000047363 #22 ENSCCRG00000023643 ENSCCRG00000023652 ENSCCRG00000074973 ENSCCRG00000023116 ENSCCRG00000070815 ENSCCRG00000032277 ENSCCRG00000036953 ENSCCRG00000062910 ENSCCRG00000075571 ENSCCRG00000064974 ENSCCRG00000053287 ENSCCRG00000061680 ENSCCRG00000036053 ENSCCRG00000058846 taf6 (ENSCCRG00000061007) Golden-line barbel MODERN SPECIES 1012 ENSSGRG00000007540 ZC3H12A (ENSSGRG00000007546) MTFP1 (ENSSGRG00000007549) lman2la (ENSSGRG00000007550) ENSSGRG00000007563 ARL3 (ENSSGRG00000007567) PAX8 (ENSSGRG00000007591) #22 ENSSGRG00000007639 ENSSGRG00000007708 Cyprininae ANCESTRAL SPECIES 267 ENSGT00940000159446.a.b ENSGT00940000165501.c.b ENSGT00950000183162.a.b.i.b.b ENSGT00530000063691.a.h ENSGT00940000156317.w.b.a.b ENSGT00390000004511.c.b.f.a ENSGT00940000155135.eb.a.a ENSGT00940000156114.c.j ENSGT00940000153838.a.n ENSGT00940000155178.i.a ENSGT00550000075100.i.a ENSGT00940000156506.b.i.b ENSGT00940000158066.p.g ENSGT00390000004019.b ENSGT00950000183109.c.b.a ENSGT00940000161868.d.b #22 ENSGT00940000155061.b.j ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 Cyprininae_a ANCESTRAL SPECIES 262 ENSGT00940000159446.a.b ENSGT00940000165501.c.b ENSGT00950000183162.a.b.i.b.b ENSGT00530000063691.a.h ENSGT00940000156317.w.b.a.b ENSGT00390000004511.c.b.f.a ENSGT00940000155135.eb.a.a ENSGT00940000156114.c.j ENSGT00940000153838.a.n ENSGT00940000155178.i.a ENSGT00550000075100.i.a ENSGT00940000156506.b.i.b ENSGT00940000158066.p.g ENSGT00390000004019.b ENSGT00950000183109.c.b.a ENSGT00940000161868.d.b #22 ENSGT00940000155061.b.j ENSGT01100000263556.a.a.q.c.b.b.b ENSGT00390000008072 Common carp reference MODERN SPECIES 15 zgc:65851 (ENSCCRG00000058685) ENSCCRG00000032514 ENSCCRG00000056776 ENSCCRG00000058879 ENSCCRG00000071340 ENSCCRG00000058700 ENSCCRG00000000364 ENSCCRG00000000379 ENSCCRG00000000515 rab14l (ENSCCRG00000053093) ddx54 (ENSCCRG00000022390) tbx5a (ENSCCRG00000043225) tbx3a (ENSCCRG00000034962) ENSCCRG00000047350 wbp1 (ENSCCRG00000060447) ENSCCRG00000014873 #22 ENSCCRG00000014881 ENSCCRG00000014895 ENSCCRG00000056779 Goldfish MODERN SPECIES 23 si:ch211-244o22.2 (ENSCARG00000038436) sema4c (ENSCARG00000038403) ENSCARG00000033583 add2 (ENSCARG00000033338) ENSCARG00000033325 fabp1a (ENSCARG00000033295) smyd1a (ENSCARG00000033231) ABL1 (ENSCARG00000032578) ddx54 (ENSCARG00000031240) tbx5a (ENSCARG00000031175) tbx3a (ENSCARG00000031161) ENSCARG00000031156 ENSCARG00000031142 MTFP1 (ENSCARG00000031126) wbp1 (ENSCARG00000031100) PAX8 (ENSCARG00000030966) #22 ENSCARG00000030945 ENSCARG00000030911 hk2 (ENSCARG00000029914) add2 (ENSCARG00000029763) ENSCARG00000029756 ENSCARG00000029715 ckap2l (ENSCARG00000029702) ENSCARG00000029692 oxt (ENSCARG00000029688) ENSCARG00000029683 Euteleosteomorpha ANCESTRAL SPECIES 57 ENSGT00530000064123 ENSGT00390000004524 ENSGT00940000156744.p ENSGT00940000161616.c ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Acanthomorphata ANCESTRAL SPECIES 43 ENSGT00530000064123 ENSGT00390000004524 ENSGT00940000156744.p ENSGT00940000161616.c ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00390000002955 ENSGT00530000063839 Cod DUPLICATION Cod MODERN SPECIES 17 PRDM12 (ENSGMOG00000011797) exosc2 (ENSGMOG00000011785) ABL1 (ENSGMOG00000011771) ENSGMOG00000011766 ddx54 (ENSGMOG00000011746) ENSGMOG00000029665 ENSGMOG00000036374 tbx5a (ENSGMOG00000011740) tbx3a (ENSGMOG00000011728) ENSGMOG00000023111 MED13L (ENSGMOG00000009244) ENSGMOG00000009237 ENSGMOG00000033321 lman2la (ENSGMOG00000014980) ENSGMOG00000033463 ENSGMOG00000011083 #22 ENSGMOG00000031833 ENSGMOG00000014165 ENSGMOG00000025626 ENSGMOG00000026857 ENSGMOG00000006680 ENSGMOG00000027087 ENSGMOG00000022581 ENSGMOG00000036431 ENSGMOG00000033035 ENSGMOG00000027422 ENSGMOG00000000427 ENSGMOG00000022776 cdpf1 (ENSGMOG00000000444) ENSGMOG00000022506 ENSGMOG00000026120 Cod MODERN SPECIES 12 zgc:136439 (ENSGMOG00000002342) ENSGMOG00000002357 ENSGMOG00000024554 osgepl1 (ENSGMOG00000012648) ENSGMOG00000020607 adat3 (ENSGMOG00000028591) ormdl1 (ENSGMOG00000012643) pms1 (ENSGMOG00000012641) mstnb (ENSGMOG00000012639) ENSGMOG00000027801 hibch (ENSGMOG00000012636) LSS (ENSGMOG00000012634) ENSGMOG00000023210 LSS (ENSGMOG00000027003) ENSGMOG00000012627 ENSGMOG00000033121 #22 YBEY (ENSGMOG00000012625) USP37 (ENSGMOG00000012619) CNOT9 (ENSGMOG00000012616) PLCD4 (ENSGMOG00000012615) ZNF142 (ENSGMOG00000029104) bcs1l (ENSGMOG00000012601) zgc:136333 (ENSGMOG00000012598) TNS1 (ENSGMOG00000032397) igfbp5b (ENSGMOG00000019318) igfbp2b (ENSGMOG00000002992) slc4a3 (ENSGMOG00000019300) ENSGMOG00000019277 gulp1a (ENSGMOG00000019273) ENSGMOG00000019130 ENSGMOG00000019119 Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00530000064123 ENSGT00390000004524 ENSGT00940000156744.p ENSGT00940000161616.c ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00390000002955 ENSGT00530000063839 ENSGT00940000166601 ENSGT00390000008296.b.b ENSGT00390000011483 Pinecone sodierfish MODERN SPECIES 3 surf2 (ENSMMDG00005013953) surf4 (ENSMMDG00005013937) ASS1 (ENSMMDG00005013928) prdm12b (ENSMMDG00005013922) exosc2 (ENSMMDG00005013919) ABL1 (ENSMMDG00005013709) rab14 (ENSMMDG00005013704) ddx54 (ENSMMDG00005012485) tbx5a (ENSMMDG00005012460) tbx3a (ENSMMDG00005012452) MED13L (ENSMMDG00005012448) MTFP1 (ENSMMDG00005012441) lman2la (ENSMMDG00005012436) wbp1 (ENSMMDG00005012435) ENSMMDG00005012434 PAX8 (ENSMMDG00005012430) #22 ENSMMDG00005012426 #23 ENSMMDG00005012424 ENSMMDG00005012421 SAPCD2 (ENSMMDG00005012420) tmem141 (ENSMMDG00005012418) zmynd19 (ENSMMDG00005012417) bspry (ENSMMDG00005012413) coq4 (ENSMMDG00005012410) ENSMMDG00005012409 ENSMMDG00005012401 ENSMMDG00005012400 fbxw5 (ENSMMDG00005012394) RIC1 (ENSMMDG00005012368) ENSMMDG00005012363 ERMP1 (ENSMMDG00005012362) Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Tiger tail seahorse MODERN SPECIES 265 MTFP1 (ENSHCOG00000003970) lman2la (ENSHCOG00000003951) wbp1 (ENSHCOG00000003920) ARL3 (ENSHCOG00000003910) PAX8 (ENSHCOG00000003889) #22 ENSHCOG00000003852 ENSHCOG00000003815 ENSHCOG00000003793 tmem141 (ENSHCOG00000003781) zmynd19 (ENSHCOG00000003768) bspry (ENSHCOG00000003736) coq4 (ENSHCOG00000003729) ENSHCOG00000003712 fbxw5 (ENSHCOG00000003688) prdm12b (ENSHCOG00000003663) fubp3 (ENSHCOG00000003639) ASS1 (ENSHCOG00000003559) surf4 (ENSHCOG00000003528) psmd5 (ENSHCOG00000003505) timm10b (ENSHCOG00000003495) Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Ovalentaria ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00940000155596.q ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 ENSGT00390000001761 Mangrove rivulus MODERN SPECIES 279 PAX8 (ENSKMAG00000009439) #22 ENSKMAG00000009513 ENSKMAG00000009563 SAPCD2 (ENSKMAG00000009594) tmem141 (ENSKMAG00000009630) nup155 (ENSKMAG00000009667) ENSKMAG00000009797 ENSKMAG00000009807 ARVCF (ENSKMAG00000009822) BMP10 (ENSKMAG00000009843) smad4a (ENSKMAG00000009868) rfx3 (ENSKMAG00000009937) glis3 (ENSKMAG00000010008) UNC5C (ENSKMAG00000010058) bmpr1bb (ENSKMAG00000010188) pdlim5b (ENSKMAG00000010235) Turquoise killifish MODERN SPECIES 1611 KIAA1432 (ENSNFUG00015018957) ENSNFUG00015019036 exosc2 (ENSNFUG00015019038) ABL1 (ENSNFUG00015019045) RAB14L (ENSNFUG00015019053) DDX54 (ENSNFUG00015019083) tbx5a (ENSNFUG00015019377) tbx3a (ENSNFUG00015019378) ENSNFUG00015019381 ENSNFUG00015019384 ENSNFUG00015019493 MTFP1 (ENSNFUG00015019495) LMAN2L (ENSNFUG00015019499) Nfu_g_1_006652 (ENSNFUG00015019513) ARL3 (ENSNFUG00015019521) PAX8 (ENSNFUG00015019611) #22 ENSNFUG00015019630 ENSNFUG00015019647 ENSNFUG00015019658 tmem141 (ENSNFUG00015019664) ZMYND19 (ENSNFUG00015019669) bspry (ENSNFUG00015019678) COQ4 (ENSNFUG00015019693) TRAF2B (ENSNFUG00015019722) FBXW5 (ENSNFUG00015019737) ENSNFUG00015019747 prdm12b (ENSNFUG00015019752) FUBP3 (ENSNFUG00015019813) ASS1 (ENSNFUG00015020918) SURF4 (ENSNFUG00015020925) rnf213a (ENSNFUG00015020954) Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000154615.i.a.a.c.b.a.b.b ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p NAME_4 ANCESTRAL SPECIES ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00940000167039 ENSGT00940000154615.i.a.a.c.b.a.b.b ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Mummichog MODERN SPECIES 2260 oaz1b (ENSFHEG00000018867) ERMP1 (ENSFHEG00000018835) RIC1 (ENSFHEG00000018706) exosc2 (ENSFHEG00000018571) ABL1 (ENSFHEG00000018524) RAB14 (ENSFHEG00000018450) ddx54 (ENSFHEG00000018425) tbx5a (ENSFHEG00000018370) tbx3a (ENSFHEG00000018347) ENSFHEG00000018326 MED13L (ENSFHEG00000018315) MTFP1 (ENSFHEG00000018305) lman2la (ENSFHEG00000018274) wbp1 (ENSFHEG00000018227) ARL3 (ENSFHEG00000018216) PAX8 (ENSFHEG00000018192) #22 ENSFHEG00000018157 ENSFHEG00000018063 ENSFHEG00000018017 ENSFHEG00000018009 ENSFHEG00000017998 ENSFHEG00000017981 Sheepshead minnow MODERN SPECIES 135 MED13L (ENSCVAG00000016701) MTFP1 (ENSCVAG00000016712) lman2la (ENSCVAG00000016770) wbp1 (ENSCVAG00000016781) ARL3 (ENSCVAG00000016797) PAX8 (ENSCVAG00000016824) #22 ENSCVAG00000016853 ENSCVAG00000016864 ENSCVAG00000016870 MFAP4 (ENSCVAG00000016879) tmem141 (ENSCVAG00000016899) zmynd19 (ENSCVAG00000016943) bspry (ENSCVAG00000016957) coq4 (ENSCVAG00000017012) ENSCVAG00000017029 ENSCVAG00000017048 fbxw5 (ENSCVAG00000017139) prdm12b (ENSCVAG00000017166) fubp3 (ENSCVAG00000017181) ASS1 (ENSCVAG00000017263) surf4 (ENSCVAG00000017276) Poeciliinae ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000154615.i.a.a.c.b.a.b.b ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p Poecilia ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000154615.i.a.a.c.b.a.b.b ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p NAME_6 ANCESTRAL SPECIES 12 ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.a ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000154615.i.a.a.c.b.a.b.b ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Sailfin molly MODERN SPECIES 424 MTFP1 (ENSPLAG00000016891) lman2la (ENSPLAG00000016887) ENSPLAG00000016873 ARL3 (ENSPLAG00000016871) PAX8 (ENSPLAG00000016854) #22 ENSPLAG00000016833 ENSPLAG00000016830 ENSPLAG00000016823 ENSPLAG00000016799 MFAP4 (ENSPLAG00000016794) tmem141 (ENSPLAG00000016780) zmynd19 (ENSPLAG00000000547) bspry (ENSPLAG00000016761) coq4 (ENSPLAG00000016741) ENSPLAG00000016702 fbxw5 (ENSPLAG00000016674) ENSPLAG00000016643 prdm12b (ENSPLAG00000016626) fubp3 (ENSPLAG00000016612) ASS1 (ENSPLAG00000016557) Amazon molly MODERN SPECIES 258 oaz1b (ENSPFOG00000019816) ERMP1 (ENSPFOG00000019817) RIC1 (ENSPFOG00000019818) exosc2 (ENSPFOG00000019819) ABL1 (ENSPFOG00000019820) RAB14 (ENSPFOG00000019821) ddx54 (ENSPFOG00000019822) ENSPFOG00000019823 tbx5a (ENSPFOG00000019824) tbx3a (ENSPFOG00000024759) MED13L (ENSPFOG00000019825) MTFP1 (ENSPFOG00000019826) lman2la (ENSPFOG00000019827) wbp1 (ENSPFOG00000019828) ARL3 (ENSPFOG00000019829) PAX8 (ENSPFOG00000019830) #22 ENSPFOG00000019831 ENSPFOG00000019832 ENSPFOG00000023048 ENSPFOG00000019833 MFAP4 (ENSPFOG00000019834) tmem141 (ENSPFOG00000019835) zmynd19 (ENSPFOG00000019836) bspry (ENSPFOG00000019837) coq4 (ENSPFOG00000019838) ENSPFOG00000019839 fbxw5 (ENSPFOG00000019840) prdm12b (ENSPFOG00000019841) fubp3 (ENSPFOG00000019842) ASS1 (ENSPFOG00000019843) surf4 (ENSPFOG00000019844) Guppy MODERN SPECIES 442 ENSPREG00000014220 oaz1b (ENSPREG00000014246) ERMP1 (ENSPREG00000014257) RIC1 (ENSPREG00000014275) exosc2 (ENSPREG00000014306) ABL1 (ENSPREG00000014327) rab14 (ENSPREG00000014355) ddx54 (ENSPREG00000014372) tbx5a (ENSPREG00000014440) tbx3a (ENSPREG00000014513) MED13L (ENSPREG00000014561) MTFP1 (ENSPREG00000014663) lman2la (ENSPREG00000014686) wbp1 (ENSPREG00000014714) ARL3 (ENSPREG00000014738) PAX8 (ENSPREG00000014784) #22 ENSPREG00000014833 ENSPREG00000014851 SAPCD2 (ENSPREG00000014882) MFAP4 (ENSPREG00000014902) tmem141 (ENSPREG00000014928) zmynd19 (ENSPREG00000014965) bspry (ENSPREG00000014977) coq4 (ENSPREG00000014990) ENSPREG00000015006 fbxw5 (ENSPREG00000015033) ENSPREG00000015060 prdm12b (ENSPREG00000015073) fubp3 (ENSPREG00000015101) ASS1 (ENSPREG00000015161) surf4 (ENSPREG00000015229) Platyfish MODERN SPECIES 22 UHRF2 (ENSXMAG00000005174) oaz1b (ENSXMAG00000028044) ERMP1 (ENSXMAG00000005226) RIC1 (ENSXMAG00000005243) exosc2 (ENSXMAG00000005265) ABL1 (ENSXMAG00000027567) RAB14 (ENSXMAG00000005294) ddx54 (ENSXMAG00000005312) tbx5a (ENSXMAG00000005348) tbx3a (ENSXMAG00000005372) MED13L (ENSXMAG00000005396) MTFP1 (ENSXMAG00000022665) lman2la (ENSXMAG00000005432) ARL3 (ENSXMAG00000022054) wbp1 (ENSXMAG00000005449) PAX8 (ENSXMAG00000005467) #22 ENSXMAG00000005479 ENSXMAG00000020022 ENSXMAG00000022588 ENSXMAG00000005483 MFAP4 (ENSXMAG00000028191) tmem141 (ENSXMAG00000005492) zmynd19 (ENSXMAG00000005494) bspry (ENSXMAG00000005501) coq4 (ENSXMAG00000026738) ENSXMAG00000020905 fbxw5 (ENSXMAG00000005523) ENSXMAG00000021921 prdm12b (ENSXMAG00000005537) fubp3 (ENSXMAG00000005541) ASS1 (ENSXMAG00000005558) Oryzias ANCESTRAL SPECIES 9 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 ENSGT00390000001761 Oryzias_b ANCESTRAL SPECIES 4 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 ENSGT00390000001761 Indian medaka MODERN SPECIES 30 UHRF2 (ENSOMEG00000003365) oaz1b (ENSOMEG00000003395) ERMP1 (ENSOMEG00000003427) RIC1 (ENSOMEG00000003478) exosc2 (ENSOMEG00000003533) ABL1 (ENSOMEG00000003602) rab14 (ENSOMEG00000003623) ddx54 (ENSOMEG00000003663) tbx5a (ENSOMEG00000003688) tbx3a (ENSOMEG00000003704) MED13L (ENSOMEG00000003740) MTFP1 (ENSOMEG00000003760) lman2la (ENSOMEG00000003804) wbp1 (ENSOMEG00000003832) ARL3 (ENSOMEG00000003861) PAX8 (ENSOMEG00000003907) #22 ENSOMEG00000003949 ENSOMEG00000003971 tmem141 (ENSOMEG00000003982) zmynd19 (ENSOMEG00000003996) bspry (ENSOMEG00000004022) coq4 (ENSOMEG00000004042) ENSOMEG00000004081 ENSOMEG00000004101 fbxw5 (ENSOMEG00000004115) prdm12b (ENSOMEG00000004134) fubp3 (ENSOMEG00000004190) ENSOMEG00000004205 surf4 (ENSOMEG00000000097) surf2 (ENSOMEG00000004238) bbln (ENSOMEG00000004252) Javanese ricefish MODERN SPECIES 3 UHRF2 (ENSOJAG00000005315) oaz1b (ENSOJAG00000005802) ERMP1 (ENSOJAG00000005824) RIC1 (ENSOJAG00000005894) exosc2 (ENSOJAG00000005986) ABL1 (ENSOJAG00000006145) rab14 (ENSOJAG00000006196) ddx54 (ENSOJAG00000006259) tbx5a (ENSOJAG00000006790) tbx3a (ENSOJAG00000006828) MED13L (ENSOJAG00000006889) MTFP1 (ENSOJAG00000009271) lman2la (ENSOJAG00000009292) wbp1 (ENSOJAG00000009366) ARL3 (ENSOJAG00000009403) PAX8 (ENSOJAG00000009455) #22 ENSOJAG00000009564 SAPCD2 (ENSOJAG00000009573) tmem141 (ENSOJAG00000009651) zmynd19 (ENSOJAG00000009661) bspry (ENSOJAG00000009678) coq4 (ENSOJAG00000009686) ENSOJAG00000009702 fbxw5 (ENSOJAG00000009766) ENSOJAG00000009798 ENSOJAG00000009819 fubp3 (ENSOJAG00000009843) ASS1 (ENSOJAG00000009991) surf4 (ENSOJAG00000010394) surf2 (ENSOJAG00000010520) bbln (ENSOJAG00000010527) Oryzias_a ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 ENSGT00390000001761 Chinese medaka MODERN SPECIES 489 UHRF2 (ENSOSIG00000002953) oaz1b (ENSOSIG00000002866) ERMP1 (ENSOSIG00000002812) RIC1 (ENSOSIG00000000883) exosc2 (ENSOSIG00000000805) ABL1 (ENSOSIG00000000316) rab14 (ENSOSIG00000000271) ddx54 (ENSOSIG00000000192) tbx5a (ENSOSIG00000019232) tbx3a (ENSOSIG00000019228) MED13L (ENSOSIG00000016571) MTFP1 (ENSOSIG00000016497) lman2la (ENSOSIG00000016469) wbp1 (ENSOSIG00000016467) ARL3 (ENSOSIG00000016466) PAX8 (ENSOSIG00000016436) #22 ENSOSIG00000016434 ENSOSIG00000016430 tmem141 (ENSOSIG00000016428) zmynd19 (ENSOSIG00000016426) bspry (ENSOSIG00000016424) ENSOSIG00000016421 fbxw5 (ENSOSIG00000016418) prdm12b (ENSOSIG00000016416) fubp3 (ENSOSIG00000016185) ASS1 (ENSOSIG00000016127) surf4 (ENSOSIG00000016116) surf4 (ENSOSIG00000016115) surf2 (ENSOSIG00000016114) bbln (ENSOSIG00000016113) ENSOSIG00000016111 Japanese Medaka HdrR MODERN SPECIES 3 oaz1b (ENSORLG00000007502) UHRF2 (ENSORLG00000007546) ERMP1 (ENSORLG00000007495) RIC1 (ENSORLG00000007468) exosc2 (ENSORLG00000007443) ABL1 (ENSORLG00000007426) rab14 (ENSORLG00000007406) ddx54 (ENSORLG00000007385) tbx5a (ENSORLG00000022701) tbx3a (ENSORLG00000007316) MED13L (ENSORLG00000007298) MTFP1 (ENSORLG00000007264) lman2la (ENSORLG00000007255) wbp1 (ENSORLG00000007241) ENSORLG00000007235 PAX8 (ENSORLG00000007225) #22 ENSORLG00000007214 ENSORLG00000007205 tmem141 (ENSORLG00000027516) zmynd19 (ENSORLG00000023521) bspry (ENSORLG00000007186) coq4 (ENSORLG00000007173) ENSORLG00000007166 fbxw5 (ENSORLG00000007130) ENSORLG00000027265 prdm12b (ENSORLG00000007114) fubp3 (ENSORLG00000007103) ENSORLG00000023111 ASS1 (ENSORLG00000007080) surf4 (ENSORLG00000007042) surf2 (ENSORLG00000007033) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Cichlidae ANCESTRAL SPECIES 10 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Haplochromini ANCESTRAL SPECIES ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 Burton s mouthbrooder MODERN SPECIES 383 tbx5a (ENSHBUG00000023661) tbx3a (ENSHBUG00000001017) MED13L (ENSHBUG00000023579) MTFP1 (ENSHBUG00000023562) lman2la (ENSHBUG00000023532) wbp1 (ENSHBUG00000023237) ARL3 (ENSHBUG00000023185) PAX8 (ENSHBUG00000023143) #22 ENSHBUG00000023095 ENSHBUG00000023077 SAPCD2 (ENSHBUG00000023067) tmem141 (ENSHBUG00000023028) zmynd19 (ENSHBUG00000023004) bspry (ENSHBUG00000022987) coq4 (ENSHBUG00000022977) ENSHBUG00000022970 fbxw5 (ENSHBUG00000022935) ENSHBUG00000022889 prdm12b (ENSHBUG00000022878) fubp3 (ENSHBUG00000022849) ASS1 (ENSHBUG00000022751) surf4 (ENSHBUG00000022701) surf2 (ENSHBUG00000022663) Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 P. nyererei MODERN SPECIES 297 tbx5a (ENSPNYG00000010202) tbx3a (ENSPNYG00000010173) MED13L (ENSPNYG00000010063) MTFP1 (ENSPNYG00000010041) ENSPNYG00000010030 lman2la (ENSPNYG00000010005) wbp1 (ENSPNYG00000009988) ARL3 (ENSPNYG00000009889) PAX8 (ENSPNYG00000009826) #22 ENSPNYG00000009803 ENSPNYG00000009786 SAPCD2 (ENSPNYG00000009762) tmem141 (ENSPNYG00000009747) zmynd19 (ENSPNYG00000009727) bspry (ENSPNYG00000009715) coq4 (ENSPNYG00000009707) ENSPNYG00000009680 ENSPNYG00000009661 fbxw5 (ENSPNYG00000009625) prdm12b (ENSPNYG00000009607) fubp3 (ENSPNYG00000009567) ASS1 (ENSPNYG00000009531) surf4 (ENSPNYG00000009510) surf2 (ENSPNYG00000009505) Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005019479 hspa5 (ENSMZEG00005019440) rabepk (ENSMZEG00005019435) hspa5 (ENSMZEG00005019431) golga2 (ENSMZEG00005019354) dnm1a (ENSMZEG00005019282) ENSMZEG00005019261 bbln (ENSMZEG00005019259) surf2 (ENSMZEG00005019255) surf4 (ENSMZEG00005019249) ASS1 (ENSMZEG00005019245) ENSMZEG00005019229 lman2la (ENSMZEG00005019224) wbp1 (ENSMZEG00005019216) ARL3 (ENSMZEG00005018934) PAX8 (ENSMZEG00005018918) #22 ENSMZEG00005018908 ENSMZEG00005018902 ENSMZEG00005018899 tmem141 (ENSMZEG00005018893) zmynd19 (ENSMZEG00005018889) bspry (ENSMZEG00005018884) coq4 (ENSMZEG00005018877) ENSMZEG00005018862 fbxw5 (ENSMZEG00005018853) ENSMZEG00005018849 tbx5a (ENSMZEG00005018829) tbx3a (ENSMZEG00005018821) MED13L (ENSMZEG00005018789) MTFP1 (ENSMZEG00005018780) ddx54 (ENSMZEG00005018773) Eastern happy MODERN SPECIES 19 ERMP1 (ENSACLG00000013682) ENSACLG00000013674 RIC1 (ENSACLG00000013629) exosc2 (ENSACLG00000013613) ABL1 (ENSACLG00000013533) RAB14 (ENSACLG00000013505) ddx54 (ENSACLG00000013176) tbx5a (ENSACLG00000013144) tbx3a (ENSACLG00000013104) MED13L (ENSACLG00000012703) MTFP1 (ENSACLG00000012678) ENSACLG00000012662 lman2la (ENSACLG00000012616) wbp1 (ENSACLG00000012561) ARL3 (ENSACLG00000012519) PAX8 (ENSACLG00000012277) #22 ENSACLG00000012256 ENSACLG00000012251 ENSACLG00000012248 tmem141 (ENSACLG00000012218) zmynd19 (ENSACLG00000012173) bspry (ENSACLG00000012152) coq4 (ENSACLG00000012074) ENSACLG00000012032 ENSACLG00000012014 ENSACLG00000011998 fbxw5 (ENSACLG00000011907) prdm12b (ENSACLG00000011876) fubp3 (ENSACLG00000011819) ASS1 (ENSACLG00000011726) surf4 (ENSACLG00000011354) Lyretail cichlid MODERN SPECIES 304 oaz1b (ENSNBRG00000005283) ERMP1 (ENSNBRG00000005304) RIC1 (ENSNBRG00000005373) exosc2 (ENSNBRG00000005453) ABL1 (ENSNBRG00000005494) RAB14 (ENSNBRG00000005542) ddx54 (ENSNBRG00000005588) tbx5a (ENSNBRG00000005703) tbx3a (ENSNBRG00000005734) ENSNBRG00000005763 ENSNBRG00000005809 MTFP1 (ENSNBRG00000005835) lman2la (ENSNBRG00000005853) wbp1 (ENSNBRG00000005883) ARL3 (ENSNBRG00000005929) PAX8 (ENSNBRG00000006034) #22 ENSNBRG00000006139 ENSNBRG00000006445 SAPCD2 (ENSNBRG00000006464) tmem141 (ENSNBRG00000006502) zmynd19 (ENSNBRG00000006551) bspry (ENSNBRG00000006579) coq4 (ENSNBRG00000006617) ENSNBRG00000006630 fbxw5 (ENSNBRG00000006664) ENSNBRG00000006712 prdm12b (ENSNBRG00000006727) fubp3 (ENSNBRG00000006751) ASS1 (ENSNBRG00000006802) surf4 (ENSNBRG00000006863) surf2 (ENSNBRG00000006881) Nile tilapia MODERN SPECIES 19 ERMP1 (ENSONIG00000014077) RIC1 (ENSONIG00000014080) exosc2 (ENSONIG00000014086) ABL1 (ENSONIG00000014093) rab14 (ENSONIG00000036893) ddx54 (ENSONIG00000038587) ddx54 (ENSONIG00000041332) ddx54 (ENSONIG00000037082) tbx5a (ENSONIG00000040090) tbx3 (ENSONIG00000042332) MED13L (ENSONIG00000000189) MTFP1 (ENSONIG00000041595) lman2la (ENSONIG00000000196) wbp1 (ENSONIG00000027290) ARL3 (ENSONIG00000000203) PAX8 (ENSONIG00000000205) #22 ENSONIG00000000208 ENSONIG00000000211 ENSONIG00000000212 tmem141 (ENSONIG00000041760) ENSONIG00000037352 zmynd19 (ENSONIG00000028142) bspry (ENSONIG00000000222) ENSONIG00000030868 coq4 (ENSONIG00000002878) ENSONIG00000002876 fbxw5 (ENSONIG00000002875) ENSONIG00000034621 prdm12b (ENSONIG00000002871) fubp3 (ENSONIG00000002861) ASS1 (ENSONIG00000002858) Midas cichlid MODERN SPECIES 75 oaz1b (ENSACIG00000018980) ERMP1 (ENSACIG00000018992) RIC1 (ENSACIG00000019017) exosc2 (ENSACIG00000019054) ABL1 (ENSACIG00000019070) rab14 (ENSACIG00000019091) ddx54 (ENSACIG00000019104) tbx5a (ENSACIG00000019128) tbx3a (ENSACIG00000019135) ENSACIG00000019151 ENSACIG00000019174 MTFP1 (ENSACIG00000019186) lman2la (ENSACIG00000019194) wbp1 (ENSACIG00000019203) ARL3 (ENSACIG00000019225) PAX8 (ENSACIG00000019236) #22 ENSACIG00000019268 ENSACIG00000019447 SAPCD2 (ENSACIG00000019450) tmem141 (ENSACIG00000019464) zmynd19 (ENSACIG00000019495) bspry (ENSACIG00000019511) coq4 (ENSACIG00000019527) ENSACIG00000019540 ENSACIG00000019560 ENSACIG00000019572 prdm12b (ENSACIG00000019578) fubp3 (ENSACIG00000019595) ASS1 (ENSACIG00000019637) surf4 (ENSACIG00000019661) surf2 (ENSACIG00000019681) Pomacentridae ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Bicolor damselfish MODERN SPECIES 1370 ENSSPAG00000001575 MTFP1 (ENSSPAG00000001567) lman2la (ENSSPAG00000001529) wbp1 (ENSSPAG00000001523) ARL3 (ENSSPAG00000001502) ENSSPAG00000001472 #22 ENSSPAG00000001459 ENSSPAG00000001447 ENSSPAG00000001442 tmem141 (ENSSPAG00000001424) zmynd19 (ENSSPAG00000001408) Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Amphiprion ANCESTRAL SPECIES 5 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276.c ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Orange clownfish MODERN SPECIES 7 UHRF2 (ENSAPEG00000013724) oaz1b (ENSAPEG00000013799) ERMP1 (ENSAPEG00000013820) RIC1 (ENSAPEG00000013948) exosc2 (ENSAPEG00000014088) ABL1 (ENSAPEG00000014156) rab14 (ENSAPEG00000014246) ddx54 (ENSAPEG00000014287) tbx5a (ENSAPEG00000014372) tbx3a (ENSAPEG00000014398) MED13L (ENSAPEG00000014442) MTFP1 (ENSAPEG00000014577) lman2la (ENSAPEG00000014593) wbp1 (ENSAPEG00000014639) ARL3 (ENSAPEG00000014648) PAX8 (ENSAPEG00000014668) #22 ENSAPEG00000014724 ENSAPEG00000014777 ENSAPEG00000014783 tmem141 (ENSAPEG00000014790) zmynd19 (ENSAPEG00000014820) bspry (ENSAPEG00000014861) coq4 (ENSAPEG00000014905) ENSAPEG00000014928 fbxw5 (ENSAPEG00000015014) ENSAPEG00000015074 prdm12b (ENSAPEG00000015092) fubp3 (ENSAPEG00000015125) ASS1 (ENSAPEG00000015205) surf4 (ENSAPEG00000015261) surf2 (ENSAPEG00000015320) Clown anemonefish MODERN SPECIES 729 MTFP1 (ENSAOCG00000024728) lman2la (ENSAOCG00000024737) wbp1 (ENSAOCG00000024740) ARL3 (ENSAOCG00000024749) PAX8 (ENSAOCG00000024754) #22 ENSAOCG00000024761 ENSAOCG00000024767 Spiny chromis MODERN SPECIES 37 UHRF2 (ENSAPOG00000009269) oaz1b (ENSAPOG00000001045) ERMP1 (ENSAPOG00000009111) RIC1 (ENSAPOG00000009018) exosc2 (ENSAPOG00000008861) ABL1 (ENSAPOG00000008719) rab14 (ENSAPOG00000008641) ddx54 (ENSAPOG00000008602) tbx5a (ENSAPOG00000008497) tbx3a (ENSAPOG00000008347) MED13L (ENSAPOG00000008309) MTFP1 (ENSAPOG00000000692) lman2la (ENSAPOG00000008137) wbp1 (ENSAPOG00000008077) ARL3 (ENSAPOG00000008070) PAX8 (ENSAPOG00000008062) #22 ENSAPOG00000008007 ENSAPOG00000007983 ENSAPOG00000007971 npdc1a (ENSAPOG00000007885) pou5f3 (ENSAPOG00000007877) fut7 (ENSAPOG00000007869) clic3 (ENSAPOG00000007855) ENSAPOG00000007815 NSMF (ENSAPOG00000000208) ENSAPOG00000000206 snrpd3l (ENSAPOG00000007512) ADORA2A (ENSAPOG00000007498) BCR (ENSAPOG00000007481) ENSAPOG00000007382 atp2a2b (ENSAPOG00000007369) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Eupercaria ANCESTRAL SPECIES 13 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Tetraodontidae ANCESTRAL SPECIES 21 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Fugu MODERN SPECIES 18 ENSTRUG00000032035 oaz1b (ENSTRUG00000014651) ERMP1 (ENSTRUG00000014672) RIC1 (ENSTRUG00000014728) exosc2 (ENSTRUG00000022436) ABL1 (ENSTRUG00000014808) rab14 (ENSTRUG00000032002) ddx54 (ENSTRUG00000014939) tbx3a (ENSTRUG00000015097) ENSTRUG00000032869 MED13L (ENSTRUG00000015129) MTFP1 (ENSTRUG00000021024) lman2la (ENSTRUG00000018670) wbp1 (ENSTRUG00000018669) arl3b (ENSTRUG00000018668) PAX8 (ENSTRUG00000018667) #22 ENSTRUG00000018666 ENSTRUG00000019940 ENSTRUG00000018665 tmem141 (ENSTRUG00000025432) zmynd19 (ENSTRUG00000018664) bspry (ENSTRUG00000018663) coq4 (ENSTRUG00000026778) ENSTRUG00000018661 fbxw5 (ENSTRUG00000018660) ENSTRUG00000022499 prdm12b (ENSTRUG00000018659) fubp3 (ENSTRUG00000018658) ASS1 (ENSTRUG00000018657) surf4 (ENSTRUG00000018656) surf2 (ENSTRUG00000018655) Tetraodon MODERN SPECIES 19 ENSTNIG00000009044 ENSTNIG00000009043 oaz1b (ENSTNIG00000001544) ERMP1 (ENSTNIG00000009042) RIC1 (ENSTNIG00000009041) ABL1 (ENSTNIG00000009040) rab14 (ENSTNIG00000009039) ENSTNIG00000009038 ddx54 (ENSTNIG00000009037) tbx5a (ENSTNIG00000009036) tbx3a (ENSTNIG00000009035) MED13L (ENSTNIG00000009034) lman2la (ENSTNIG00000009032) wbp1 (ENSTNIG00000009031) ARL3 (ENSTNIG00000009030) PAX8 (ENSTNIG00000009029) #22 ENSTNIG00000009028 ENSTNIG00000009027 tmem141 (ENSTNIG00000009026) zmynd19 (ENSTNIG00000009025) bspry (ENSTNIG00000009024) coq4 (ENSTNIG00000009023) ENSTNIG00000009022 fbxw5 (ENSTNIG00000009021) prdm12b (ENSTNIG00000009020) fubp3 (ENSTNIG00000009019) ASS1 (ENSTNIG00000009018) surf4 (ENSTNIG00000004786) surf2 (ENSTNIG00000009017) bbln (ENSTNIG00000009016) ENSTNIG00000009015 Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Ballan wrasse MODERN SPECIES 373 ENSLBEG00000016683 ENSLBEG00000016715 ENSLBEG00000016735 ENSLBEG00000016757 ENSLBEG00000016773 ENSLBEG00000016813 ENSLBEG00000016870 ENSLBEG00000016893 ENSLBEG00000016928 ENSLBEG00000016971 PPEF2 (ENSLBEG00000017067) NUP54 (ENSLBEG00000017209) lman2la (ENSLBEG00000017282) wbp1 (ENSLBEG00000017302) ARL3 (ENSLBEG00000017331) PAX8 (ENSLBEG00000017374) #22 ENSLBEG00000017417 ENSLBEG00000017450 ENSLBEG00000017477 tmem141 (ENSLBEG00000017509) zmynd19 (ENSLBEG00000017540) bspry (ENSLBEG00000017570) coq4 (ENSLBEG00000017614) ENSLBEG00000017673 fbxw5 (ENSLBEG00000017712) ENSLBEG00000017751 prdm12b (ENSLBEG00000017769) fubp3 (ENSLBEG00000017826) ASS1 (ENSLBEG00000017952) surf4 (ENSLBEG00000017988) surf2 (ENSLBEG00000018023) Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Perciformes ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828.c.a ENSGT00390000003828.c.b ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 Cottioidei ANCESTRAL SPECIES 18 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828.c.a ENSGT00390000003828.d ENSGT00390000003828.c.b ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Lumpfish MODERN SPECIES 3 UHRF2 (ENSCLMG00005002519) oaz1b (ENSCLMG00005002514) ERMP1 (ENSCLMG00005002477) RIC1 (ENSCLMG00005002458) exosc2 (ENSCLMG00005002457) ABL1 (ENSCLMG00005002301) rab14 (ENSCLMG00005002289) ddx54 (ENSCLMG00005001515) tbx5a (ENSCLMG00005012885) tbx3a (ENSCLMG00005012883) MED13L (ENSCLMG00005012872) MTFP1 (ENSCLMG00005012870) lman2la (ENSCLMG00005012868) wbp1 (ENSCLMG00005012867) ARL3 (ENSCLMG00005012854) PAX8 (ENSCLMG00005012852) #22 ENSCLMG00005012836 ENSCLMG00005012828 ENSCLMG00005012826 tmem141 (ENSCLMG00005012824) zmynd19 (ENSCLMG00005012822) bspry (ENSCLMG00005012821) ENSCLMG00005012820 coq4 (ENSCLMG00005012818) ENSCLMG00005012808 ENSCLMG00005012805 fbxw5 (ENSCLMG00005012799) prdm12b (ENSCLMG00005012797) FUBP3 (ENSCLMG00005012607) ASS1 (ENSCLMG00005012564) surf4 (ENSCLMG00005012538) Stickleback MODERN SPECIES 13 ENSGACG00000016831 oaz1b (ENSGACG00000016830) ERMP1 (ENSGACG00000016822) RIC1 (ENSGACG00000016817) exosc2 (ENSGACG00000016805) ABL1 (ENSGACG00000016802) RAB14 (ENSGACG00000016799) ddx54 (ENSGACG00000016793) tbx5a (ENSGACG00000016787) tbx3a (ENSGACG00000016783) MED13L (ENSGACG00000016778) MTFP1 (ENSGACG00000016771) lman2la (ENSGACG00000016768) wbp1 (ENSGACG00000016766) ARL3 (ENSGACG00000016756) PAX8 (ENSGACG00000016747) #22 ENSGACG00000016743 SAPCD2 (ENSGACG00000016739) zmynd19 (ENSGACG00000016735) bspry (ENSGACG00000016732) coq4 (ENSGACG00000016728) ENSGACG00000016724 fbxw5 (ENSGACG00000016714) prdm12b (ENSGACG00000016713) fubp3 (ENSGACG00000016704) ASS1 (ENSGACG00000016668) surf4 (ENSGACG00000016660) surf2 (ENSGACG00000016655) bbln (ENSGACG00000016653) ENSGACG00000016651 dnm1a (ENSGACG00000016647) Perciformes_a ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828.c.a ENSGT00390000003828.c.b ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 Pike perch MODERN SPECIES 48 UHRF2 (ENSSLUG00000016186) oaz1b (ENSSLUG00000016174) ERMP1 (ENSSLUG00000016162) RIC1 (ENSSLUG00000016075) exosc2 (ENSSLUG00000016017) ABL1 (ENSSLUG00000015925) rab14 (ENSSLUG00000015897) ddx54 (ENSSLUG00000015044) tbx5a (ENSSLUG00000014999) tbx3a (ENSSLUG00000014976) MED13L (ENSSLUG00000013022) MTFP1 (ENSSLUG00000012925) lman2la (ENSSLUG00000012917) wbp1 (ENSSLUG00000012912) ARL3 (ENSSLUG00000012910) PAX8 (ENSSLUG00000012900) #22 ENSSLUG00000012893 ENSSLUG00000012888 SAPCD2 (ENSSLUG00000012878) tmem141 (ENSSLUG00000012873) zmynd19 (ENSSLUG00000012862) bspry (ENSSLUG00000012855) coq4 (ENSSLUG00000012847) ENSSLUG00000012839 ENSSLUG00000012829 fbxw5 (ENSSLUG00000012811) prdm12b (ENSSLUG00000012800) fubp3 (ENSSLUG00000012696) ASS1 (ENSSLUG00000012653) surf4 (ENSSLUG00000012626) surf2 (ENSSLUG00000012623) Channel bull blenny MODERN SPECIES 3 UHRF2 (ENSCGOG00000008002) oaz1b (ENSCGOG00000007978) ERMP1 (ENSCGOG00000007891) RIC1 (ENSCGOG00000007380) exosc2 (ENSCGOG00000007190) ABL1 (ENSCGOG00000007126) rab14 (ENSCGOG00000006925) ddx54 (ENSCGOG00000006489) tbx5a (ENSCGOG00000006469) tbx3a (ENSCGOG00000006466) MED13L (ENSCGOG00000005576) MTFP1 (ENSCGOG00000005540) lman2la (ENSCGOG00000005501) wbp1 (ENSCGOG00000005495) ARL3 (ENSCGOG00000005482) PAX8 (ENSCGOG00000005349) #22 ENSCGOG00000005337 ENSCGOG00000005333 ENSCGOG00000005332 tmem141 (ENSCGOG00000005331) zmynd19 (ENSCGOG00000005330) bspry (ENSCGOG00000005328) coq4 (ENSCGOG00000005305) ENSCGOG00000005300 fbxw5 (ENSCGOG00000005294) ENSCGOG00000005292 prdm12b (ENSCGOG00000005285) fubp3 (ENSCGOG00000005239) ASS1 (ENSCGOG00000004254) surf4 (ENSCGOG00000004111) surf2 (ENSCGOG00000004082) Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 European seabass MODERN SPECIES 9 ENSDLAG00005009941 ENSDLAG00005009689 ENSDLAG00005008555 exosc2 (ENSDLAG00005008514) ENSDLAG00005008230 ENSDLAG00005008202 ddx54 (ENSDLAG00005007003) tbx5a (ENSDLAG00005006932) tbx3a (ENSDLAG00005006894) ENSDLAG00005006851 MED13L (ENSDLAG00005003222) ENSDLAG00005034988 lman2la (ENSDLAG00005031892) wbp1 (ENSDLAG00005028150) ENSDLAG00005002787 ENSDLAG00005002368 #22 ENSDLAG00005002346 ENSDLAG00005002342 ENSDLAG00005002325 tmem141 (ENSDLAG00005002309) zmynd19 (ENSDLAG00005002293) bspry (ENSDLAG00005027799) coq4 (ENSDLAG00005002266) ENSDLAG00005028376 ENSDLAG00005002242 fbxw5 (ENSDLAG00005032850) PRDM12 (ENSDLAG00005002235) ENSDLAG00005001821 ASS1 (ENSDLAG00005001692) surf4 (ENSDLAG00005001562) surf2 (ENSDLAG00005001537) Large yellow croaker MODERN SPECIES 4 UHRF2 (ENSLCRG00005011361) oaz1b (ENSLCRG00005011446) ERMP1 (ENSLCRG00005011455) RIC1 (ENSLCRG00005011482) exosc2 (ENSLCRG00005011489) ABL1 (ENSLCRG00005011496) rab14 (ENSLCRG00005011551) ddx54 (ENSLCRG00005011592) tbx5a (ENSLCRG00005012543) tbx3a (ENSLCRG00005012545) MED13L (ENSLCRG00005012560) MTFP1 (ENSLCRG00005013771) lman2la (ENSLCRG00005013773) wbp1 (ENSLCRG00005013776) ARL3 (ENSLCRG00005013778) PAX8 (ENSLCRG00005013783) #22 ENSLCRG00005013851 ENSLCRG00005013855 ENSLCRG00005013856 tmem141 (ENSLCRG00005013859) zmynd19 (ENSLCRG00005013862) bspry (ENSLCRG00005013864) fbxw5 (ENSLCRG00005013868) ENSLCRG00005013874 ENSLCRG00005013883 prdm12b (ENSLCRG00005013884) fubp3 (ENSLCRG00005013901) ASS1 (ENSLCRG00005014767) surf4 (ENSLCRG00005014773) surf2 (ENSLCRG00005014840) bbln (ENSLCRG00005014841) Gilthead seabream MODERN SPECIES 3 UHRF2 (ENSSAUG00010024681) oaz1b (ENSSAUG00010024738) ERMP1 (ENSSAUG00010024745) RIC1 (ENSSAUG00010024782) exosc2 (ENSSAUG00010024796) ABL1 (ENSSAUG00010024811) rab14 (ENSSAUG00010024847) ddx54 (ENSSAUG00010024869) tbx5a (ENSSAUG00010025401) tbx3a (ENSSAUG00010025409) MED13L (ENSSAUG00010025431) MTFP1 (ENSSAUG00010026124) lman2la (ENSSAUG00010026125) wbp1 (ENSSAUG00010026127) ARL3 (ENSSAUG00010026128) PAX8 (ENSSAUG00010026129) #22 ENSSAUG00010026134 ENSSAUG00010026136 ENSSAUG00010026137 tmem141 (ENSSAUG00010026138) zmynd19 (ENSSAUG00010026139) bspry (ENSSAUG00010026140) coq4 (ENSSAUG00010026142) ENSSAUG00010026144 fbxw5 (ENSSAUG00010026148) ENSSAUG00010026150 prdm12b (ENSSAUG00010026152) fubp3 (ENSSAUG00010026166) ASS1 (ENSSAUG00010026280) surf4 (ENSSAUG00010026309) surf2 (ENSSAUG00010026312) Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 Anabantaria ANCESTRAL SPECIES 12 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Zig-zag eel MODERN SPECIES 3 ENSMAMG00000012395 ENSMAMG00000012458 ENSMAMG00000012466 ENSMAMG00000012491 ENSMAMG00000012627 ENSMAMG00000012709 ENSMAMG00000012750 ddx54 (ENSMAMG00000012784) tbx5a (ENSMAMG00000012799) tbx3a (ENSMAMG00000012815) MED13L (ENSMAMG00000012829) MTFP1 (ENSMAMG00000025995) lman2la (ENSMAMG00000012904) wbp1 (ENSMAMG00000012931) ENSMAMG00000012951 ENSMAMG00000012962 #22 ENSMAMG00000013009 ENSMAMG00000027224 ENSMAMG00000013046 tmem141 (ENSMAMG00000026285) zmynd19 (ENSMAMG00000025065) bspry (ENSMAMG00000013084) COQ4 (ENSMAMG00000027953) ENSMAMG00000013138 fbxw5 (ENSMAMG00000013169) ENSMAMG00000013194 PRDM12 (ENSMAMG00000013212) ENSMAMG00000013259 ASS1 (ENSMAMG00000013331) surf4 (ENSMAMG00000028137) surf2 (ENSMAMG00000013394) Anabantoidei ANCESTRAL SPECIES 16 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 ENSGT00390000001761 Siamese fighting fish MODERN SPECIES 3 ERMP1 (ENSBSLG00000011523) RIC1 (ENSBSLG00000011928) exosc2 (ENSBSLG00000012167) ABL1 (ENSBSLG00000012314) rab14 (ENSBSLG00000012526) ddx54 (ENSBSLG00000013310) tbx5a (ENSBSLG00000013792) ENSBSLG00000013803 tbx3a (ENSBSLG00000014066) MED13L (ENSBSLG00000014200) ENSBSLG00000014852 MTFP1 (ENSBSLG00000014863) lman2la (ENSBSLG00000014871) wbp1 (ENSBSLG00000014887) ARL3 (ENSBSLG00000014889) PAX8 (ENSBSLG00000014908) #22 ENSBSLG00000014961 ENSBSLG00000014968 ENSBSLG00000014978 tmem141 (ENSBSLG00000014987) zmynd19 (ENSBSLG00000015147) bspry (ENSBSLG00000015185) coq4 (ENSBSLG00000015207) ENSBSLG00000015231 fbxw5 (ENSBSLG00000015349) prdm12b (ENSBSLG00000015415) fubp3 (ENSBSLG00000015474) ASS1 (ENSBSLG00000016773) surf4 (ENSBSLG00000017160) surf2 (ENSBSLG00000017298) bbln (ENSBSLG00000017308) Climbing perch MODERN SPECIES 3 ENSATEG00000018932 ENSATEG00000018879 ENSATEG00000018816 ENSATEG00000018719 exosc2 (ENSATEG00000018680) ENSATEG00000018625 ENSATEG00000018600 ddx54 (ENSATEG00000018529) tbx5a (ENSATEG00000018495) tbx3a (ENSATEG00000018471) MED13L (ENSATEG00000018446) ENSATEG00000018433 lman2la (ENSATEG00000018394) ENSATEG00000018387 ENSATEG00000018332 ENSATEG00000018296 #22 ENSATEG00000018259 ENSATEG00000018195 ENSATEG00000018181 tmem141 (ENSATEG00000029937) zmynd19 (ENSATEG00000027841) bspry (ENSATEG00000018141) coq4 (ENSATEG00000018127) ENSATEG00000018082 fbxw5 (ENSATEG00000018044) PRDM12 (ENSATEG00000029530) ENSATEG00000018030 ASS1 (ENSATEG00000017991) surf4 (ENSATEG00000017980) surf2 (ENSATEG00000017959) C9orf16 (ENSATEG00000025511) Carangaria ANCESTRAL SPECIES 17 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 Carangaria_A ANCESTRAL SPECIES 18 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Seriola ANCESTRAL SPECIES 19 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00940000176908 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Greater amberjack MODERN SPECIES 368 ENSSDUG00000004664 MTFP1 (ENSSDUG00000004694) lman2la (ENSSDUG00000004710) wbp1 (ENSSDUG00000004755) ARL3 (ENSSDUG00000004762) PAX8 (ENSSDUG00000004783) #22 ENSSDUG00000004805 ENSSDUG00000004835 ENSSDUG00000004885 tmem141 (ENSSDUG00000004893) zmynd19 (ENSSDUG00000004906) bspry (ENSSDUG00000004930) coq4 (ENSSDUG00000004940) ENSSDUG00000004953 Yellowtail amberjack MODERN SPECIES 2993 UHRF2 (ENSSLDG00000010802) oaz1b (ENSSLDG00000010778) ERMP1 (ENSSLDG00000010736) RIC1 (ENSSLDG00000010673) exosc2 (ENSSLDG00000010616) ABL1 (ENSSLDG00000010560) rab14 (ENSSLDG00000010503) ddx54 (ENSSLDG00000010380) tbx5a (ENSSLDG00000010300) tbx3a (ENSSLDG00000010254) MED13L (ENSSLDG00000010110) MTFP1 (ENSSLDG00000010055) lman2la (ENSSLDG00000010011) wbp1 (ENSSLDG00000009987) ARL3 (ENSSLDG00000009955) PAX8 (ENSSLDG00000009885) #22 ENSSLDG00000009845 ENSSLDG00000009821 ENSSLDG00000009803 tmem141 (ENSSLDG00000009782) zmynd19 (ENSSLDG00000009755) bspry (ENSSLDG00000009739) coq4 (ENSSLDG00000009715) ENSSLDG00000009677 ENSSLDG00000009654 fbxw5 (ENSSLDG00000009600) prdm12b (ENSSLDG00000009557) fubp3 (ENSSLDG00000009455) ASS1 (ENSSLDG00000009327) surf2 (ENSSLDG00000009296) bbln (ENSSLDG00000009275) Barramundi perch MODERN SPECIES 546 MED13L (ENSLCAG00010015783) MTFP1 (ENSLCAG00010015804) lman2la (ENSLCAG00010015810) wbp1 (ENSLCAG00010015814) ARL3 (ENSLCAG00010015818) PAX8 (ENSLCAG00010015825) #22 ENSLCAG00010015832 ENSLCAG00010015837 Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 ENSGT00390000002955 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008372.A ENSGT00940000167039 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000161616.c ENSGT00940000156744.p ENSGT00390000004524 ENSGT00530000064123 ENSGT00940000165981 Tongue sole MODERN SPECIES 5 mapk10 (ENSCSEG00000018779) ptpn13 (ENSCSEG00000018747) ENSCSEG00000018738 ENSCSEG00000018728 sdad1 (ENSCSEG00000018706) ENSCSEG00000018688 DHX29 (ENSCSEG00000018670) mtrex (ENSCSEG00000018621) pappaa (ENSCSEG00000018594) ENSCSEG00000018588 ENSCSEG00000018583 MTFP1 (ENSCSEG00000018575) lman2la (ENSCSEG00000018564) wbp1 (ENSCSEG00000018558) ARL3 (ENSCSEG00000018550) PAX8 (ENSCSEG00000018528) #22 ENSCSEG00000018508 ENSCSEG00000018506 ENSCSEG00000018497 ENSCSEG00000018493 ENSCSEG00000018487 zmynd19 (ENSCSEG00000018480) bspry (ENSCSEG00000018475) coq4 (ENSCSEG00000018468) ENSCSEG00000018446 fbxw5 (ENSCSEG00000018408) prdm12b (ENSCSEG00000017877) fubp3 (ENSCSEG00000017815) ASS1 (ENSCSEG00000017796) surf4 (ENSCSEG00000017790) surf2 (ENSCSEG00000017777) Turbot MODERN SPECIES 7 ENSSMAG00000002939 ENSSMAG00000002990 ENSSMAG00000003001 ENSSMAG00000003043 exosc2 (ENSSMAG00000003112) ENSSMAG00000003144 ENSSMAG00000003166 ddx54 (ENSSMAG00000003210) tbx5a (ENSSMAG00000003299) tbx3a (ENSSMAG00000003329) MED13L (ENSSMAG00000003366) ENSSMAG00000026897 lman2la (ENSSMAG00000003448) wbp1 (ENSSMAG00000003482) ENSSMAG00000003506 ENSSMAG00000003527 #22 ENSSMAG00000003558 ENSSMAG00000003594 ENSSMAG00000003632 ENSSMAG00000035043 bspry (ENSSMAG00000030034) zmynd19 (ENSSMAG00000003656) coq4 (ENSSMAG00000003693) TRAF2 (ENSSMAG00000003707) fbxw5 (ENSSMAG00000003725) ENSSMAG00000029428 PRDM12 (ENSSMAG00000003754) ENSSMAG00000003793 ASS1 (ENSSMAG00000003884) surf4 (ENSSMAG00000028722) surf2 (ENSSMAG00000003923) Protacanthopterygii ANCESTRAL SPECIES 16 ENSGT00390000004524 ENSGT00940000156744.p ENSGT00940000161616.c ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155434 ENSGT00940000155178 ENSGT00550000075100 ENSGT00940000156506.b ENSGT00940000158066.p ENSGT00390000013680.a ENSGT00390000004019 ENSGT00940000155596.r ENSGT00950000183109.c.b ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000155061.b ENSGT01100000263556.a.a.q.c.b.b ENSGT00390000008072 ENSGT00940000153116.D ENSGT00940000153820.b.a ENSGT00940000165151.a ENSGT00390000003828 ENSGT00940000166276 ENSGT00730000111276 ENSGT00940000176908 ENSGT00390000006998 ENSGT00510000049510 ENSGT00530000064035.b ENSGT00940000164889 ENSGT00390000016127 Northern pike MODERN SPECIES 13 surf4 (ENSELUG00000013950) ASS1 (ENSELUG00000013912) fubp3 (ENSELUG00000013808) prdm12b (ENSELUG00000013674) exosc2 (ENSELUG00000013641) ABL1 (ENSELUG00000013603) ENSELUG00000013571 ddx54 (ENSELUG00000013533) tbx5a (ENSELUG00000000495) tbx3a (ENSELUG00000000490) MED13L (ENSELUG00000013395) MTFP1 (ENSELUG00000013236) lman2la (ENSELUG00000013212) wbp1 (ENSELUG00000013160) ARL3 (ENSELUG00000013130) PAX8 (ENSELUG00000013067) #22 ENSELUG00000012993 ENSELUG00000012986 SAPCD2 (ENSELUG00000000472) tmem141 (ENSELUG00000012978) zmynd19 (ENSELUG00000012955) bspry (ENSELUG00000012914) coq4 (ENSELUG00000012896) ENSELUG00000012878 fbxw5 (ENSELUG00000012852) alad (ENSELUG00000012795) tmem203 (ENSELUG00000012753) TPRN (ENSELUG00000012735) ssna1 (ENSELUG00000034545) anapc2 (ENSELUG00000012675) ENSELUG00000012622 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 84 ENSGT00530000064123.i.b ENSGT00390000004524.`b.a ENSGT00940000156744.p.h ENSGT00940000161616.c.q.b ENSGT00940000153596.B.a ENSGT00940000153838.a.p ENSGT00940000155178.be.b ENSGT00550000075100.b ENSGT00940000156506.b.e ENSGT00940000158066.p.i ENSGT00390000013680.a.e ENSGT00390000004019.d.b ENSGT00940000155596.r.a ENSGT00950000183109.c.b.c ENSGT00940000155737.a.a.b ENSGT00940000161868.g.a #22 ENSGT00940000155061.b.h ENSGT01100000263556.a.a.q.c.b.b.d ENSGT00390000008072.n ENSGT00940000153820.b.a.b ENSGT00940000165151.a.e ENSGT00390000003828.f ENSGT00940000166276.a ENSGT00730000111276.k ENSGT00940000176908 ENSGT00390000006998.h.b ENSGT00510000049510.b ENSGT00530000064035.b.j ENSGT00940000164889.d ENSGT00390000016127.j ENSGT00940000156223.r.a Huchen MODERN SPECIES 1157 MED13L (ENSHHUG00000000509) ENSHHUG00000000491 lman2la (ENSHHUG00000000320) wbp1 (ENSHHUG00000000312) ARL3 (ENSHHUG00000000222) ENSHHUG00000000142 #22 ENSHHUG00000000122 ENSHHUG00000000117 ENSHHUG00000000112 zmynd19 (ENSHHUG00000000106) bspry (ENSHHUG00000000103) Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00530000064123.i.b ENSGT00390000004524.`b.a ENSGT00940000156744.p.h ENSGT00940000161616.c.q.b ENSGT00940000153596.B.a ENSGT00940000153838.a.p ENSGT00940000155178.be.b ENSGT00550000075100.b ENSGT00940000156506.b.e ENSGT00940000158066.p.i ENSGT00390000013680.a.e ENSGT00390000004019.d.b ENSGT00940000155596.r.a ENSGT00950000183109.c.b.c ENSGT00940000155737.a.a.b ENSGT00940000161868.g.a #22 ENSGT00940000155061.b.h ENSGT01100000263556.a.a.q.c.b.b.d ENSGT00390000008072.n ENSGT00940000153820.b.a.b ENSGT00940000165151.a.e ENSGT00390000003828.f ENSGT00940000166276.a ENSGT00730000111276.k ENSGT00940000176908 ENSGT00390000006998.h.b ENSGT00510000049510.b ENSGT00530000064035.b.j ENSGT00940000164889.d ENSGT00390000016127.j ENSGT00940000156223.r.a Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00530000064123.i.b ENSGT00390000004524.`b.a ENSGT00940000156744.p.h ENSGT00940000161616.c.q.b ENSGT00940000153596.B.a ENSGT00940000153838.a.p ENSGT00940000155178.be.b ENSGT00550000075100.b ENSGT00940000156506.b.e ENSGT00940000158066.p.i ENSGT00390000013680.a.e ENSGT00970000197823 ENSGT00940000155596.r.a ENSGT00950000183109.c.b.c ENSGT00940000155737.a.a.b ENSGT00940000161868.g.a #22 ENSGT00940000155061.b.h ENSGT01100000263556.a.a.q.c.b.b.d ENSGT00390000008072.n ENSGT00940000153820.b.a.b ENSGT00940000165151.a.e ENSGT00390000003828.f ENSGT00940000166276.a ENSGT00730000111276.k ENSGT00940000176908 ENSGT00390000006998.h.b ENSGT00510000049510.b ENSGT00530000064035.b.j ENSGT00940000164889.d ENSGT00390000016127.j ENSGT00940000156223.r.a Rainbow trout MODERN SPECIES 364 PRDM12 (ENSOMYG00000039879) exosc2 (ENSOMYG00000039850) ABL1 (ENSOMYG00000039096) ENSOMYG00000038917 ddx54 (ENSOMYG00000037010) tbx5a (ENSOMYG00000036825) tbx3a (ENSOMYG00000036807) ENSOMYG00000074980 MED13L (ENSOMYG00000034266) ENSOMYG00000052187 ENSOMYG00000034051 lman2la (ENSOMYG00000034022) wbp1 (ENSOMYG00000066567) ENSOMYG00000074189 ENSOMYG00000033962 ENSOMYG00000033937 #22 ENSOMYG00000033906 ENSOMYG00000033888 ENSOMYG00000033880 zmynd19 (ENSOMYG00000055076) bspry (ENSOMYG00000073906) ENSOMYG00000050581 coq4 (ENSOMYG00000033797) traf2 (ENSOMYG00000033771) fbxw5 (ENSOMYG00000033745) ENSOMYG00000033755 alad (ENSOMYG00000033316) tmem203 (ENSOMYG00000033230) ENSOMYG00000066224 ssna1 (ENSOMYG00000047734) anapc2 (ENSOMYG00000047728) Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00530000064123.i.b ENSGT00390000004524.`b.a ENSGT00940000156744.p.h ENSGT00940000161616.c.q.b ENSGT00940000153596.B.a ENSGT00940000153838.a.p ENSGT00940000155178.be.b ENSGT00550000075100.b ENSGT00940000156506.b.e ENSGT00940000158066.p.i ENSGT00390000013680.a.e ENSGT00970000197823 ENSGT00940000155596.r.a ENSGT00950000183109.c.b.c ENSGT00940000155737.a.a.b ENSGT00940000161868.g.a #22 ENSGT00940000155061.b.h ENSGT01100000263556.a.a.q.c.b.b.d ENSGT00390000008072.n ENSGT00940000153820.b.a.b ENSGT00940000165151.a.e ENSGT00390000003828.f ENSGT00940000166276.a ENSGT00730000111276.k ENSGT00940000176908 ENSGT00390000006998.h.b ENSGT00510000049510.b ENSGT00530000064035.b.j ENSGT00940000164889.d ENSGT00390000016127.j ENSGT00940000156223.r.a Coho salmon MODERN SPECIES 21 surf4 (ENSOKIG00005031106) ASS1 (ENSOKIG00005029918) FUBP3 (ENSOKIG00005029639) PRDM12 (ENSOKIG00005029614) exosc2 (ENSOKIG00005029559) ABL1 (ENSOKIG00005029339) ENSOKIG00005029288 ddx54 (ENSOKIG00005028229) tbx5a (ENSOKIG00005028169) tbx3a (ENSOKIG00005028148) MED13L (ENSOKIG00005026243) ENSOKIG00005026166 lman2la (ENSOKIG00005026125) wbp1 (ENSOKIG00005026112) ARL3 (ENSOKIG00005026102) PAX8 (ENSOKIG00005025754) #22 ENSOKIG00005025719 ENSOKIG00005025711 ENSOKIG00005025700 zmynd19 (ENSOKIG00005025657) bspry (ENSOKIG00005025646) coq4 (ENSOKIG00005025610) ENSOKIG00005025565 ENSOKIG00005025541 fbxw5 (ENSOKIG00005025516) alad (ENSOKIG00005025023) tmem203 (ENSOKIG00005024984) TPRN (ENSOKIG00005024969) anapc2 (ENSOKIG00005024798) ssna1 (ENSOKIG00005024773) ENSOKIG00005023288 Chinook salmon MODERN SPECIES 26 bbln (ENSOTSG00005022778) surf2 (ENSOTSG00005022777) surf4 (ENSOTSG00005022774) ASS1 (ENSOTSG00005022548) fubp3 (ENSOTSG00005022296) prdm12b (ENSOTSG00005022294) exosc2 (ENSOTSG00005022293) ABL1 (ENSOTSG00005021616) ENSOTSG00005021606 ddx54 (ENSOTSG00005016975) tbx5a (ENSOTSG00005016939) MED13L (ENSOTSG00005014835) lman2la (ENSOTSG00005014823) wbp1 (ENSOTSG00005014820) ARL3 (ENSOTSG00005014819) PAX8 (ENSOTSG00005014818) #22 ENSOTSG00005014817 ENSOTSG00005014816 SAPCD2 (ENSOTSG00005014815) zmynd19 (ENSOTSG00005014814) bspry (ENSOTSG00005014813) ENSOTSG00005014812 ENSOTSG00005014811 ENSOTSG00005014810 ENSOTSG00005014809 fbxw5 (ENSOTSG00005014808) alad (ENSOTSG00005014739) tmem203 (ENSOTSG00005014734) TPRN (ENSOTSG00005014733) anapc2 (ENSOTSG00005014707) ssna1 (ENSOTSG00005014706) Salmo ANCESTRAL SPECIES 1 ENSGT00530000064123.i.b ENSGT00390000004524.`b.a ENSGT00940000156744.p.h ENSGT00940000161616.c.q.b ENSGT00940000153596.B.a ENSGT00940000153838.a.p ENSGT00940000155178.be.b ENSGT00550000075100.b ENSGT00940000156506.b.e ENSGT00940000158066.p.i ENSGT00390000013680.a.e ENSGT00390000004019.d.b ENSGT00940000155596.r.a ENSGT00950000183109.c.b.c ENSGT00940000155737.a.a.b ENSGT00940000161868.g.a #22 ENSGT00940000161976 #23 ENSGT00940000155061.b.h ENSGT01100000263556.a.a.q.c.b.b.d ENSGT00390000008072.n ENSGT00940000153820.b.a.b ENSGT00940000165151.a.e ENSGT00390000003828.f ENSGT00940000166276.a ENSGT00730000111276.k ENSGT00940000176908 ENSGT00390000006998.h.b ENSGT00510000049510.b ENSGT00530000064035.b.j ENSGT00940000164889.d ENSGT00390000016127.j River trout MODERN SPECIES 3 ASS1 (ENSSTUG00000018795) fubp3 (ENSSTUG00000018711) prdm12b (ENSSTUG00000018697) ENSSTUG00000018691 exosc2 (ENSSTUG00000018647) ABL1 (ENSSTUG00000018521) ENSSTUG00000018496 ddx54 (ENSSTUG00000016460) tbx5a (ENSSTUG00000016397) tbx3a (ENSSTUG00000016362) MED13L (ENSSTUG00000014456) MTFP1 (ENSSTUG00000014350) lman2la (ENSSTUG00000014261) wbp1 (ENSSTUG00000014258) ARL3 (ENSSTUG00000014254) PAX8 (ENSSTUG00000014036) #22 ENSSTUG00000014017 #23 ENSSTUG00000014015 ENSSTUG00000041269 zmynd19 (ENSSTUG00000041224) bspry (ENSSTUG00000041216) ENSSTUG00000041211 coq4 (ENSSTUG00000041136) ENSSTUG00000040994 ENSSTUG00000040971 fbxw5 (ENSSTUG00000040893) alad (ENSSTUG00000040352) tmem203 (ENSSTUG00000040331) TPRN (ENSSTUG00000040321) ssna1 (ENSSTUG00000040314) ENSSTUG00000040310 Atlantic salmon MODERN SPECIES 2 ass1 (ENSSSAG00000053906) FUBP3 (ENSSSAG00000053592) PRDM12 (ENSSSAG00000053567) exos2 (ENSSSAG00000053553) ABL1 (ENSSSAG00000052199) ENSSSAG00000113831 ENSSSAG00000090542 ddx54 (ENSSSAG00000051599) tbx5a (ENSSSAG00000051541) tbx3a (ENSSSAG00000051503) MED13L (ENSSSAG00000046800) ENSSSAG00000046705 lman2l (ENSSSAG00000046353) wbp1 (ENSSSAG00000097666) ENSSSAG00000046313 ENSSSAG00000045905 #22 ENSSSAG00000045867 ENSSSAG00000045860 ENSSSAG00000045846 zmynd19 (ENSSSAG00000103900) bspry (ENSSSAG00000116160) coq4 (ENSSSAG00000093761) ENSSSAG00000110412 ENSSSAG00000045688 fbxw5 (ENSSSAG00000045642) alad (ENSSSAG00000045261) tmem203 (ENSSSAG00000095175) ENSSSAG00000045191 ssna1 (ENSSSAG00000103143) ENSSSAG00000038869 pmchl (ENSSSAG00000120136) Salmoninae ANCESTRAL SPECIES 79 ENSGT00530000064123.i.a ENSGT00390000004524.`b.b ENSGT00940000156744.p.g ENSGT00940000161616.c.q.a ENSGT00940000153596.B.b ENSGT00940000153838.a.o ENSGT00940000155178.be.a ENSGT00550000075100.a ENSGT00940000156506.b.f ENSGT00940000158066.p.j ENSGT00390000013680.a.f ENSGT00390000004019.d.a ENSGT00390000004019.c ENSGT00940000155596.r.b ENSGT00950000183109.c.b.d ENSGT00940000161868.g.b #22 ENSGT00940000155061.b.g ENSGT01100000263556.a.a.q.c.b.b.c ENSGT00390000008072.m ENSGT00940000153116.D ENSGT00940000153820.b.a.a ENSGT00940000165151.a.f ENSGT00390000003828.e ENSGT00940000166276.b ENSGT00730000111276.l.a ENSGT00390000006998.h.a ENSGT00510000049510.a ENSGT00530000064035.b.i ENSGT00940000164889.c ENSGT00390000016127.i ENSGT00940000156223.r.b Huchen MODERN SPECIES 128 bbln (ENSHHUG00000003511) surf2 (ENSHHUG00000003482) surf4 (ENSHHUG00000003378) ASS1 (ENSHHUG00000003324) fubp3 (ENSHHUG00000003292) prdm12b (ENSHHUG00000003269) exosc2 (ENSHHUG00000003239) ABL1 (ENSHHUG00000003184) ENSHHUG00000003123 ddx54 (ENSHHUG00000002778) tbx5a (ENSHHUG00000002743) tbx3a (ENSHHUG00000002721) MTFP1 (ENSHHUG00000002301) lman2la (ENSHHUG00000002227) wbp1 (ENSHHUG00000002220) ENSHHUG00000002154 #22 ENSHHUG00000002144 ENSHHUG00000002141 ENSHHUG00000002135 tmem141 (ENSHHUG00000002131) zmynd19 (ENSHHUG00000002112) bspry (ENSHHUG00000002106) coq4 (ENSHHUG00000002095) ENSHHUG00000002079 ENSHHUG00000002073 ENSHHUG00000002066 alad (ENSHHUG00000001753) tmem203 (ENSHHUG00000001741) TPRN (ENSHHUG00000001738) ENSHHUG00000001737 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00530000064123.i.a ENSGT00390000004524.`b.b ENSGT00940000156744.p.g ENSGT00940000161616.c.q.a ENSGT00940000153596.B.b ENSGT00940000153838.a.o ENSGT00940000155178.be.a ENSGT00550000075100.a ENSGT00940000156506.b.f ENSGT00940000158066.p.j ENSGT00390000013680.a.f ENSGT00390000004019.d.a ENSGT00390000004019.c ENSGT00940000155596.r.b ENSGT00950000183109.c.b.d ENSGT00940000161868.g.b #22 ENSGT00940000155061.b.g ENSGT01100000263556.a.a.q.c.b.b.c ENSGT00390000008072.m ENSGT00940000153116.D ENSGT00940000153820.b.a.a ENSGT00940000165151.a.f ENSGT00390000003828.e ENSGT00940000166276.b ENSGT00730000111276.l.a ENSGT00390000006998.h.a ENSGT00510000049510.a ENSGT00530000064035.b.i ENSGT00940000164889.c ENSGT00390000016127.i ENSGT00940000156223.r.b Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000165981.c ENSGT00530000064123.i.a ENSGT00390000004524.`b.b ENSGT00940000156744.p.g ENSGT00940000161616.c.q.a ENSGT00940000153596.B.b ENSGT00940000153838.a.o ENSGT00940000155178.be.a ENSGT00550000075100.a ENSGT00940000156506.b.f ENSGT00940000158066.p.j ENSGT00390000013680.a.f ENSGT00390000004019.c ENSGT00940000155596.r.b ENSGT00950000183109.c.b.d ENSGT00940000161868.g.b #22 ENSGT00940000155061.b.g ENSGT01100000263556.a.a.q.c.b.b.c ENSGT00390000008072.m ENSGT00940000153116.D ENSGT00940000153820.b.a.a ENSGT00940000165151.a.f ENSGT00390000003828.e ENSGT00940000166276.b ENSGT00730000111276.l.a ENSGT00390000006998.h.a ENSGT00510000049510.a ENSGT00530000064035.b.i ENSGT00940000164889.c ENSGT00390000016127.i ENSGT00940000156223.r.b Rainbow trout MODERN SPECIES 26 ENSOMYG00000028364 FUBP3 (ENSOMYG00000027630) PRDM12 (ENSOMYG00000027478) exosc2 (ENSOMYG00000027435) ENSOMYG00000061507 ABL1 (ENSOMYG00000027335) ENSOMYG00000054603 ENSOMYG00000061663 ddx54 (ENSOMYG00000044398) tbx5a (ENSOMYG00000044392) tbx3a (ENSOMYG00000044386) MED13L (ENSOMYG00000042837) ENSOMYG00000042631 lman2la (ENSOMYG00000042614) wbp1 (ENSOMYG00000042607) ENSOMYG00000042268 #22 ENSOMYG00000042220 ENSOMYG00000051805 ENSOMYG00000042202 tmem141 (ENSOMYG00000066784) zmynd19 (ENSOMYG00000042184) bspry (ENSOMYG00000042162) coq4 (ENSOMYG00000042156) ENSOMYG00000042133 fbxw5 (ENSOMYG00000074041) alad (ENSOMYG00000041869) tmem203 (ENSOMYG00000041853) ENSOMYG00000041851 ssna1 (ENSOMYG00000041846) anapc2 (ENSOMYG00000041800) ENSOMYG00000040077 Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00940000165981.c ENSGT00530000064123.i.a ENSGT00390000004524.`b.b ENSGT00940000156744.p.g ENSGT00940000161616.c.q.a ENSGT00940000153596.B.b ENSGT00940000153838.a.o ENSGT00940000155178.be.a ENSGT00550000075100.a ENSGT00940000156506.b.f ENSGT00940000158066.p.j ENSGT00390000013680.a.f ENSGT00390000004019.c ENSGT00940000155596.r.b ENSGT00950000183109.c.b.d ENSGT00940000161868.g.b #22 ENSGT00940000155061.b.g ENSGT01100000263556.a.a.q.c.b.b.c ENSGT00390000008072.m ENSGT00940000153116.D ENSGT00940000153820.b.a.a ENSGT00940000165151.a.f ENSGT00390000003828.e ENSGT00940000166276.b ENSGT00390000006998.h.a ENSGT00510000049510.a ENSGT00530000064035.b.i ENSGT00940000164889.c ENSGT00390000016127.i ENSGT00940000156223.r.b ENSGT00640000091617 Coho salmon MODERN SPECIES 15 surf2 (ENSOKIG00005016402) surf4 (ENSOKIG00005016412) ASS1 (ENSOKIG00005016442) fubp3 (ENSOKIG00005016569) PRDM12 (ENSOKIG00005017338) exosc2 (ENSOKIG00005017346) ABL1 (ENSOKIG00005017372) ENSOKIG00005017522 tbx5a (ENSOKIG00005017576) tbx3a (ENSOKIG00005017594) ENSOKIG00005017617 MED13L (ENSOKIG00005017715) MTFP1 (ENSOKIG00005019740) lman2la (ENSOKIG00005019749) wbp1 (ENSOKIG00005019771) PAX8 (ENSOKIG00005019779) #22 ENSOKIG00005019979 ENSOKIG00005020044 ENSOKIG00005020053 tmem141 (ENSOKIG00005020063) zmynd19 (ENSOKIG00005020069) coq4 (ENSOKIG00005020095) ENSOKIG00005006095 alad (ENSOKIG00005006261) tmem203 (ENSOKIG00005006661) ENSOKIG00005006666 ssna1 (ENSOKIG00005006675) anapc2 (ENSOKIG00005006691) ENSOKIG00005006884 ENSOKIG00005007183 pmchl (ENSOKIG00005007192) Chinook salmon MODERN SPECIES 12 haus4 (ENSOTSG00005011818) golga2 (ENSOTSG00005011814) dnm1a (ENSOTSG00005011620) ENSOTSG00005011615 bbln (ENSOTSG00005011613) surf2 (ENSOTSG00005011611) surf4 (ENSOTSG00005011538) ASS1 (ENSOTSG00005011537) fubp3 (ENSOTSG00005010789) prdm12b (ENSOTSG00005010783) exosc2 (ENSOTSG00005010763) ABL1 (ENSOTSG00005010698) MTFP1 (ENSOTSG00005010696) ENSOTSG00005010694 wbp1 (ENSOTSG00005010693) PAX8 (ENSOTSG00005010692) #22 ENSOTSG00005010690 ENSOTSG00005010688 ENSOTSG00005010686 tmem141 (ENSOTSG00005010685) zmynd19 (ENSOTSG00005010683) bspry (ENSOTSG00005010680) coq4 (ENSOTSG00005010679) ENSOTSG00005010677 alad (ENSOTSG00005009780) tmem203 (ENSOTSG00005009779) TPRN (ENSOTSG00005009778) ssna1 (ENSOTSG00005009777) anapc2 (ENSOTSG00005009768) ENSOTSG00005009723 ENSOTSG00005009712 Salmo ANCESTRAL SPECIES ENSGT00940000165981.c ENSGT00530000064123.i.a ENSGT00390000004524.`b.b ENSGT00940000156744.p.g ENSGT00940000161616.c.q.a ENSGT00940000153596.B.b ENSGT00940000153838.a.o ENSGT00940000155178.be.a ENSGT00550000075100.a ENSGT00940000156506.b.f ENSGT00940000158066.p.j ENSGT00390000013680.a.f ENSGT00390000004019.d.a ENSGT00940000155596.r.b ENSGT00950000183109.c.b.d ENSGT00940000161868.g.b #22 ENSGT00940000155061.b.g ENSGT01100000263556.a.a.q.c.b.b.c ENSGT00390000008072.m ENSGT00940000153116.D ENSGT00940000153820.b.a.a ENSGT00940000165151.a.f ENSGT00390000003828.e ENSGT00940000166276.b ENSGT00730000111276.l.a ENSGT00390000006998.h.a ENSGT00510000049510.a ENSGT00530000064035.b.i ENSGT00940000164889.c ENSGT00390000016127.i ENSGT00940000156223.r.b River trout MODERN SPECIES 15 surf2 (ENSSTUG00000007334) surf4 (ENSSTUG00000007353) ASS1 (ENSSTUG00000007486) fubp3 (ENSSTUG00000007715) prdm12b (ENSSTUG00000008671) exosc2 (ENSSTUG00000008679) ABL1 (ENSSTUG00000008699) ENSSTUG00000008762 ddx54 (ENSSTUG00000008778) tbx5a (ENSSTUG00000008782) tbx3a (ENSSTUG00000008807) MED13L (ENSSTUG00000008836) MTFP1 (ENSSTUG00000009394) lman2la (ENSSTUG00000009399) wbp1 (ENSSTUG00000009414) PAX8 (ENSSTUG00000009418) #22 ENSSTUG00000009463 ENSSTUG00000009469 ENSSTUG00000009477 ENSSTUG00000009481 tmem141 (ENSSTUG00000009497) zmynd19 (ENSSTUG00000009505) bspry (ENSSTUG00000009515) coq4 (ENSSTUG00000009521) ENSSTUG00000009535 ENSSTUG00000009546 alad (ENSSTUG00000009571) tmem203 (ENSSTUG00000009966) ENSSTUG00000009969 ssna1 (ENSSTUG00000009983) anapc2 (ENSSTUG00000009998) Atlantic salmon MODERN SPECIES surf4 (ENSSSAG00000043718) ENSSSAG00000044036 ENSSSAG00000104543 FUBP3 (ENSSSAG00000044217) PRDM12 (ENSSSAG00000044522) exosc2 (ENSSSAG00000044601) ABL1 (ENSSSAG00000044669) RAB14 (ENSSSAG00000044909) tbx5a (ENSSSAG00000098747) tbx3a (ENSSSAG00000045305) MED13L (ENSSSAG00000045379) ENSSSAG00000119392 ENSSSAG00000046506 wbp1 (ENSSSAG00000118623) ENSSSAG00000108201 ENSSSAG00000046569 #22 ENSSSAG00000083874 ENSSSAG00000082784 ENSSSAG00000085679 bspry (ENSSSAG00000046851) zmynd19 (ENSSSAG00000114135) coq4 (ENSSSAG00000099892) traf2 (ENSSSAG00000046864) fbxw5 (ENSSSAG00000046876) alad (ENSSSAG00000046917) ENSSSAG00000047271 ssna1 (ENSSSAG00000047279) anapc2 (ENSSSAG00000083062) ENSSSAG00000047353 ENSSSAG00000085958 pmchl (ENSSSAG00000054255) Salmoninae ANCESTRAL SPECIES ENSGT00940000161868.h #22 Huchen MODERN SPECIES 6603 ENSHHUG00000006966 #22 Osteoglossiformes ANCESTRAL SPECIES 18 ENSGT00950000182983.A.a.b ENSGT00940000158348.e.b ENSGT01030000234641.b.a.a ENSGT00940000155737.a.a ENSGT00940000161868 #22 ENSGT00940000157919.b ENSGT00940000160317 ENSGT00940000157186.c ENSGT00390000015375 ENSGT00390000004495 ENSGT00940000154078.a.a.a ENSGT00950000183002.B.b ENSGT00950000183002.C.c.a ENSGT01030000234641.b.a.b.a.a ENSGT00940000164872 ENSGT00940000165336.a ENSGT01030000235288 ENSGT00940000169341 ENSGT00950000183185.c.a.b ENSGT01030000234578.A.b.a.a.a P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 169 PLPP7 (ENSPKIG00000018871) PRRC2B (ENSPKIG00000018815) VAV2 (ENSPKIG00000018599) brd3a (ENSPKIG00000018511) wdr5 (ENSPKIG00000018481) RXRA (ENSPKIG00000018422) TPCN1 (ENSPKIG00000018355) ddx54 (ENSPKIG00000018272) tbx5a (ENSPKIG00000018233) tbx3a (ENSPKIG00000018198) MED13L (ENSPKIG00000018117) MTFP1 (ENSPKIG00000018083) lman2la (ENSPKIG00000018038) wbp1 (ENSPKIG00000018008) ARL3 (ENSPKIG00000017974) ENSPKIG00000017901 #22 ENSPKIG00000017781 SAPCD2 (ENSPKIG00000017704) tmem141 (ENSPKIG00000017663) zmynd19 (ENSPKIG00000017618) bspry (ENSPKIG00000017584) ENSPKIG00000017553 fbxw5 (ENSPKIG00000017528) ENSPKIG00000017507 alad (ENSPKIG00000017469) tmem203 (ENSPKIG00000017450) TPRN (ENSPKIG00000017441) ssna1 (ENSPKIG00000017420) anapc2 (ENSPKIG00000017399) ENSPKIG00000017375 atp6v1g1 (ENSPKIG00000017345) P. kingsleyae MODERN SPECIES 180 SLC4A5 (ENSPKIG00000020466) ogfod2 (ENSPKIG00000020443) zgc:113436 (ENSPKIG00000020423) abcb9 (ENSPKIG00000020401) VPS37B (ENSPKIG00000020384) ascc2 (ENSPKIG00000020354) ENSPKIG00000020305 sec14l8 (ENSPKIG00000020261) CNNM4 (ENSPKIG00000020220) ENSPKIG00000020193 ckap2l (ENSPKIG00000020166) SNX18 (ENSPKIG00000020141) si:dkey-193c22.1 (ENSPKIG00000020128) ENSPKIG00000020026 tmem175 (ENSPKIG00000019974) PAX8 (ENSPKIG00000019903) #22 ENSPKIG00000019866 ENSPKIG00000019848 cfap299 (ENSPKIG00000019826) entpd8 (ENSPKIG00000019801) trub2 (ENSPKIG00000019769) ENSPKIG00000019732 coq4 (ENSPKIG00000019707) hdhd3 (ENSPKIG00000019695) slc31a1 (ENSPKIG00000019675) tgfa (ENSPKIG00000019657) SLC2A11 (ENSPKIG00000019631) PATZ1 (ENSPKIG00000019584) EIF4ENIF1 (ENSPKIG00000019521) CARD9 (ENSPKIG00000019487) ENSPKIG00000019469 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 13 cdc45 (ENSSFOG00015014162) cldn5a (ENSSFOG00015029621) zgc:63587 (ENSSFOG00015014108) septin5b (ENSSFOG00015014043) gp1bb (ENSSFOG00015028345) dhx37 (ENSSFOG00015013932) ENSSFOG00015013897 srrd (ENSSFOG00015013882) tfip11 (ENSSFOG00015013856) NTNG2 (ENSSFOG00015013845) med27 (ENSSFOG00015013800) RAPGEF1 (ENSSFOG00015013768) KCNT1 (ENSSFOG00015013619) lman2lb (ENSSFOG00015013563) ENSSFOG00015026309 ENSSFOG00015013532 #22 ENSSFOG00015013503 ENSSFOG00015028696 entpd8 (ENSSFOG00015013417) trub2 (ENSSFOG00015026963) coq4 (ENSSFOG00015013366) hdhd3 (ENSSFOG00015024270) SLC31A1 (ENSSFOG00015013316) tgfa (ENSSFOG00015033163) SLC2A11 (ENSSFOG00015013267) PATZ1 (ENSSFOG00015027276) EIF4ENIF1 (ENSSFOG00015013137) pomt1 (ENSSFOG00015013073) CARD9 (ENSSFOG00015013049) ENSSFOG00015026746 entr1 (ENSSFOG00015013020) Asian bonytongue MODERN SPECIES 21 EDF1 (ENSSFOG00015014414) VAV2 (ENSSFOG00015014468) ENSSFOG00015014658 ENSSFOG00015014856 RXRA (ENSSFOG00015014907) ENSSFOG00015014928 TPCN1 (ENSSFOG00015014935) ddx54 (ENSSFOG00015014981) tbx5a (ENSSFOG00015015110) tbx3a (ENSSFOG00015015160) MED13L (ENSSFOG00015015197) MTFP1 (ENSSFOG00015015246) lman2la (ENSSFOG00015024643) wbp1 (ENSSFOG00015015317) arl3b (ENSSFOG00015015338) PAX8 (ENSSFOG00015015363) #22 ENSSFOG00015015384 SAPCD2 (ENSSFOG00015025215) tmem141 (ENSSFOG00015009336) zmynd19 (ENSSFOG00015009314) bspry (ENSSFOG00015009306) ENSSFOG00015009277 fbxw5 (ENSSFOG00015009197) ENSSFOG00015009254 alad (ENSSFOG00015024894) tmem203 (ENSSFOG00015009136) TPRN (ENSSFOG00015028597) ssna1 (ENSSFOG00015009077) anapc2 (ENSSFOG00015009044) atp6v1g1 (ENSSFOG00015029297) slc31a1 (ENSSFOG00015026024)