Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000153770.s.b.a.a #15	ENSGT00940000153048.A #12	ENSGT00940000163546	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.b ##15	ENSGT00940000154279 #14	ENSGT00940000154039.a.a.a	ENSGT00940000154413 #20	ENSGT00940000162515 #13	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154279 #14	ENSGT00940000154039.a.a.a	ENSGT00940000154413 #20	ENSGT00940000153924 #11	ENSGT00940000153048.A #12	ENSGT00940000153770.s.b.a.a #15	ENSGT00940000162515 #13	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154413 #20	ENSGT00940000153924 #11	ENSGT00940000153048.A #12	ENSGT00940000153770.s.b.a.a #15	ENSGT00940000162515 #13	ENSGT00940000154279 #14	ENSGT00940000154039.a.a.a	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154413 #20	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.a.a.i.a #16	ENSGT00940000154279.k.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000154279.k.b #19	ENSGT00940000162515 #13	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Percora_a	ANCESTRAL SPECIES	13	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000162515.e #13	ENSGT00940000154279.l #14	ENSGT00940000153770.s.b.a.a.i.a.b.b.a ##15	ENSGT00940000154279.k.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000154279.k.b #19	ENSGT00940000154413 #20	ENSGT00940000153770.s.b.a.a.i.a.b.a ##15	ENSGT00940000162515.f.b ##13	ENSGT00940000153048.A.k ##12	ENSGT00940000153770.s.b.a.a.i.a.a ##15	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000153048.A.l.b ##12	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.a.a.i.a.b.b.b #16	ENSGT00940000153048.A.l.a #12	ENSGT00940000162515.e #13	ENSGT00940000154279.l #14	ENSGT00940000153770.s.b.a.a.i.a.b.b.a ##15	ENSGT00940000154279.k.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000162515.f.b ##13	ENSGT00940000154279.k.b #19	ENSGT00940000154413 #20	ENSGT00940000153048.A.k ##12	ENSGT00940000153770.s.b.a.a.i.a.a ##15	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Caprinae	ANCESTRAL SPECIES	9	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000153924 #11	ENSGT00940000153048.A.l.a #12	ENSGT00940000153770.s.b.b ##15	ENSGT00940000154279.l #14	ENSGT00940000153770.s.b.a.a.i.b.b #15	ENSGT00940000153770.s.b.a.a.i.a.b.b.b #16	ENSGT00940000154279.k.a #17	ENSGT00940000153770.s.b.a.a.i.b.a #18	ENSGT00940000162515.f.b ##13	ENSGT00940000154279.k.b #19	ENSGT00940000154413 #20	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Goat	MODERN SPECIES	2	FOXI3 (ENSCHIG00000017715) #7	TEX37 (ENSCHIG00000008884) #8	EIF2AK3 (ENSCHIG00000014792) #9	ENSCHIG00000016539 #10	ENSCHIG00000013882 #11	ENSCHIG00000018862 #12	ENSCHIG00000021988 #13	ENSCHIG00000016512 #14	ENSCHIG00000007937 #15	ENSCHIG00000013725 #16	ENSCHIG00000009419 #17	ENSCHIG00000025571 #18	ENSCHIG00000007247 #19	ENSCHIG00000005902 #20	ENSCHIG00000018738 #21	PAX8 (ENSCHIG00000019864) #22	PSD4 (ENSCHIG00000025022) #23	IL1RN (ENSCHIG00000009696) #24	IL1F10 (ENSCHIG00000026412) #25	IL36RN (ENSCHIG00000021710) #26	ENSCHIG00000010918 #27	IL36A (ENSCHIG00000020898) #28	IL36G (ENSCHIG00000024406) #29	ENSCHIG00000003716 #30	IL1B (ENSCHIG00000024469) #31	IL1A (ENSCHIG00000011256) #32	CKAP2L (ENSCHIG00000011558) #33	NT5DC4 (ENSCHIG00000021437) #34	SLC20A1 (ENSCHIG00000019150) #35	CHCHD5 (ENSCHIG00000024993) #36	POLR1B (ENSCHIG00000014527) #37
Rambouillet Sheep	MODERN SPECIES	19	THNSL2 (ENSOARG00020000914)	FOXI3 (ENSOARG00020000935) #7	TEX37 (ENSOARG00020000939) #8	ENSOARG00020000945	EIF2AK3 (ENSOARG00020000964) #9	RPIA (ENSOARG00020001011) #10	ENSOARG00020001068	ENSOARG00020001377 ##12	ENSOARG00020001383 ##15	ENSOARG00020001393 #14	ENSOARG00020001398 #17	ENSOARG00020001405 #18	ENSOARG00020001409 ##13	ENSOARG00020001420 #19	ENSOARG00020001431 #21	PAX8 (ENSOARG00020001447) #22	IL1RN (ENSOARG00020001505) #24	IL1F10 (ENSOARG00020001537) #25	IL36RN (ENSOARG00020001543) #26	ENSOARG00020001559 #29	ENSOARG00020001567 #30	IL1B (ENSOARG00020001628) #31	IL1A (ENSOARG00020001647) #32	CKAP2L (ENSOARG00020001672) #33	SLC20A1 (ENSOARG00020001709) #35	ENSOARG00020001721	CHCHD5 (ENSOARG00020001731) #36	POLR1B (ENSOARG00020001752) #37	TTL (ENSOARG00020001816)	NCK2 (ENSOARG00020001838)	ECRG4 (ENSOARG00020001846)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000153048.A.l.b ##12	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.a.a.i.a.b.b.b #16	ENSGT00940000153048.A.l.a #12	ENSGT00940000154279.l #14	ENSGT00940000153770.s.b.a.a.i.a.b.b.a ##15	ENSGT00940000154279.k.a.a.b.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000153048.A.k ##12	ENSGT00940000153770.s.b.a.a.i.a.a ##15	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Bos	ANCESTRAL SPECIES	5	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000153048.A.l.b ##12	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.a.a.i.a.b.b.a ##15	ENSGT00940000154279.k.a.a.b.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000153048.A.k ##12	ENSGT00940000153770.s.b.a.a.i.a.a ##15	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Bos_b	ANCESTRAL SPECIES	9	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000153048.A.l.b ##12	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.a.a.i.a.b.b.b #16	ENSGT00940000154279.k.a.a.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000153770.s.b.a.a.i.a.b.a ##15	ENSGT00940000162515.f.b ##13	ENSGT00940000153770.s.b.a.a.i.a.a ##15	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000003316.d.g.a.a.a	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Cow	MODERN SPECIES	2	FABP1 (ENSBTAG00000018054)	THNSL2 (ENSBTAG00000004364)	FOXI3 (ENSBTAG00000040093) #7	TEX37 (ENSBTAG00000009033) #8	EIF2AK3 (ENSBTAG00000000184) #9	RPIA (ENSBTAG00000002866) #10	ENSBTAG00000045659 #11	ENSBTAG00000045514 #11	ENSBTAG00000051342 #15	ENSBTAG00000003408 #16	ENSBTAG00000051611 ##15	ENSBTAG00000047029	ENSBTAG00000050329 ##15	ENSBTAG00000054154 ##13	ENSBTAG00000047185 ##15	PAX8 (ENSBTAG00000019354) #22	PSD4 (ENSBTAG00000019072) #23	IL1RN (ENSBTAG00000019665) #24	IL1F10 (ENSBTAG00000018012) #25	IL36RN (ENSBTAG00000039839) #26	IL36B (ENSBTAG00000002088) #27	IL36A (ENSBTAG00000002087) #28	IL36G (ENSBTAG00000002085) #29	ENSBTAG00000039476 #30	IL37 (ENSBTAG00000013675) #30	IL1B (ENSBTAG00000001321) #31	ENSBTAG00000047637	IL1A (ENSBTAG00000010349) #32	CKAP2L (ENSBTAG00000002298) #33	SLC20A1 (ENSBTAG00000007895) #35	CHCHD5 (ENSBTAG00000052525) #36
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005013000	THNSL2 (ENSBIXG00005013033)	FOXI3 (ENSBIXG00005013060) #7	TEX37 (ENSBIXG00005013074) #8	EIF2AK3 (ENSBIXG00005013174) #9	RPIA (ENSBIXG00005006722) #10	ENSBIXG00005013253 ##12	ENSBIXG00005013257 #11	ENSBIXG00005006800 #12	ENSBIXG00005001529 #14	ENSBIXG00005006723 #17	ENSBIXG00005001531 #17	ENSBIXG00005013322 #15	ENSBIXG00005001577 ##15	ENSBIXG00005006725 #21	PAX8 (ENSBIXG00005013401) #22	IL1RN (ENSBIXG00005013595) #24	IL1F10 (ENSBIXG00005013623) #25	IL36RN (ENSBIXG00005013654) #26	ENSBIXG00005013671 #27	IL36A (ENSBIXG00005013806) #28	IL36G (ENSBIXG00005013845) #29	ENSBIXG00005005414 #30	IL37 (ENSBIXG00005007317) #30	IL1B (ENSBIXG00005013957) #31	ENSBIXG00005013983	IL1A (ENSBIXG00005014003) #32	CKAP2L (ENSBIXG00005001762) #33	SLC20A1 (ENSBIXG00005014094) #35	ENSBIXG00005006368	CHCHD5 (ENSBIXG00005001841) #36
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000153048.A.l.b ##12	ENSGT00940000153924 #11	ENSGT00940000153770.s.b.a.a.i.a.b.b.a ##15	ENSGT00940000154279.k.a.a.b.a #17	ENSGT00940000153770.s.b.a.a.i.b #15	ENSGT00940000153048.A.k ##12	ENSGT00940000153770.s.b.a.a.i.a.a ##15	ENSGT00940000162515.f.a #21	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Wild yak	MODERN SPECIES	287										ENSBMUG00000008624 ##15	ENSBMUG00000008613 #17	ENSBMUG00000008609 #15	ENSBMUG00000008589 ##12	ENSBMUG00000008585 ##15	ENSBMUG00000008570 #21	PAX8 (ENSBMUG00000008442) #22	PSD4 (ENSBMUG00000008316) #23	IL1RN (ENSBMUG00000008175) #24	IL1F10 (ENSBMUG00000008154) #25	IL36RN (ENSBMUG00000008151) #26	ENSBMUG00000008148 #27	ENSBMUG00000008095 #28	IL36G (ENSBMUG00000008051) #29	IL37 (ENSBMUG00000007995) #30	IL1B (ENSBMUG00000007939) #31	ENSBMUG00000007924	IL1A (ENSBMUG00000007911) #32	CKAP2L (ENSBMUG00000007898) #33	NT5DC4 (ENSBMUG00000007884) #34	SLC20A1 (ENSBMUG00000007857) #35	CHCHD5 (ENSBMUG00000007853) #36
Domestic yak	MODERN SPECIES	28	ENSBGRG00000018232	ENSBGRG00000018190	KRCC1 (ENSBGRG00000018104)	SMYD1 (ENSBGRG00000017869)	ENSBGRG00000017744	THNSL2 (ENSBGRG00000017501)	FOXI3 (ENSBGRG00000017441) #7	TEX37 (ENSBGRG00000017385) #8	EIF2AK3 (ENSBGRG00000016796) #9	RPIA (ENSBGRG00000016607) #10	ENSBGRG00000016576 #11	ENSBGRG00000016462 #16	ENSBGRG00000016163 ##15	ENSBGRG00000016116 ##15	ENSBGRG00000015902 #21	PAX8 (ENSBGRG00000015485) #22	PSD4 (ENSBGRG00000015366) #23	IL1RN (ENSBGRG00000015122) #24	IL1F10 (ENSBGRG00000015059) #25	IL36RN (ENSBGRG00000015003) #26	ENSBGRG00000014951 #27	ENSBGRG00000014739 #28	IL36G (ENSBGRG00000014645) #29	ENSBGRG00000014599 #30	ENSBGRG00000014317 #30	IL1B (ENSBGRG00000014234) #31	IL1A (ENSBGRG00000014153) #32	CKAP2L (ENSBGRG00000014090) #33	SLC20A1 (ENSBGRG00000013607) #35	CHCHD5 (ENSBGRG00000013449) #36	POLR1B (ENSBGRG00000012846) #37
American bison	MODERN SPECIES	2965			FOXI3 (ENSBBBG00000017548) #7	TEX37 (ENSBBBG00000008163) #8	EIF2AK3 (ENSBBBG00000008655) #9	RPIA (ENSBBBG00000008513) #10	ENSBBBG00000007266 ##12	ENSBBBG00000017008 #14	ENSBBBG00000007177 ##15	ENSBBBG00000004205 #17	ENSBBBG00000008511 #17	ENSBBBG00000016966 #17	ENSBBBG00000016963 #15	ENSBBBG00000007144 ##15	ENSBBBG00000016948 #21	PAX8 (ENSBBBG00000008755) #22	ENSBBBG00000016789 #23	IL1RN (ENSBBBG00000016773) #24	IL1F10 (ENSBBBG00000007425) #25	IL36RN (ENSBBBG00000016741) #26	ENSBBBG00000007457 #27	IL36A (ENSBBBG00000016723) #28	ENSBBBG00000016695 #29	ENSBBBG00000016684 #30	IL37 (ENSBBBG00000007905) #30	IL1B (ENSBBBG00000004109) #31	IL1A (ENSBBBG00000004101) #32	CKAP2L (ENSBBBG00000004092) #33	SLC20A1 (ENSBBBG00000000738) #35	CHCHD5 (ENSBBBG00000000764) #36	POLR1B (ENSBBBG00000016563) #37
Siberian musk deer	MODERN SPECIES	243	ENSMMSG00000000356	ENSMMSG00000000368 #7	TEX37 (ENSMMSG00000000376) #8	EIF2AK3 (ENSMMSG00000000390) #9	RPIA (ENSMMSG00000000421) #10	ENSMMSG00000000579	ENSMMSG00000001328 #20	ENSMMSG00000001347 ##15	ENSMMSG00000001368 ##15	ENSMMSG00000001380 ##15	ENSMMSG00000001393 #16	ENSMMSG00000001403 #15	ENSMMSG00000001407	ENSMMSG00000001417 ##13	ENSMMSG00000001454 #21	PAX8 (ENSMMSG00000001557) #22	PSD4 (ENSMMSG00000001714) #23	IL1RN (ENSMMSG00000001813) #24	IL1F10 (ENSMMSG00000001837) #25	IL36RN (ENSMMSG00000001844) #26	ENSMMSG00000001855 #27	IL36A (ENSMMSG00000001878) #28	IL36G (ENSMMSG00000001905) #29	IL37 (ENSMMSG00000001926) #30	IL1B (ENSMMSG00000001955) #31	IL1A (ENSMMSG00000001977) #32	CKAP2L (ENSMMSG00000001992) #33	SLC20A1 (ENSMMSG00000002017) #35	CHCHD5 (ENSMMSG00000002033) #36	POLR1B (ENSMMSG00000002079) #37	TTL (ENSMMSG00000002168)
Yarkand deer	MODERN SPECIES	2	FOXI3 (ENSCHYG00000006575) #7	TEX37 (ENSCHYG00000006544) #8	EIF2AK3 (ENSCHYG00000006244) #9	RPIA (ENSCHYG00000006181) #10	ENSCHYG00000006157	ENSCHYG00000006143	ENSCHYG00000005147	ENSCHYG00000004967 #20	ENSCHYG00000004958 ##12	ENSCHYG00000004948 ##15	ENSCHYG00000004936 #12	ENSCHYG00000004927 #15	ENSCHYG00000004919 #17	ENSCHYG00000004915	ENSCHYG00000004866	PAX8 (ENSCHYG00000004732) #22	PSD4 (ENSCHYG00000004655) #23	IL1RN (ENSCHYG00000004620) #24	IL1F10 (ENSCHYG00000004601) #25	IL36RN (ENSCHYG00000004592) #26	ENSCHYG00000004573 #27	IL36A (ENSCHYG00000004567) #28	ENSCHYG00000004557 #29	ENSCHYG00000004549 #30	IL37 (ENSCHYG00000004531) #30	IL1B (ENSCHYG00000004515) #31	IL1A (ENSCHYG00000004464) #32	CKAP2L (ENSCHYG00000004352) #33	SLC20A1 (ENSCHYG00000004127) #35	CHCHD5 (ENSCHYG00000026674) #36	POLR1B (ENSCHYG00000026586) #37
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000162565	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00390000012177 #8	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154413 #20	ENSGT00940000153924 #11	ENSGT00940000154279 #14	ENSGT00940000153770.s.b.a.a #15	ENSGT00940000164880	ENSGT00940000154039.a.a.a.c	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37	ENSGT00940000174607
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00940000168371	ENSGT00940000162565	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154413 #20	ENSGT00940000153924 #11	ENSGT00940000154279 #14	ENSGT00940000153770.s.b.a.a #15	ENSGT00940000164880	ENSGT00940000154039.a.a.a.c	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37	ENSGT00940000161907	ENSGT00940000157396
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00390000018741.l	ENSGT00390000006413	ENSGT00940000153203.A.b	ENSGT00940000156588	ENSGT00510000048998	ENSGT00940000162565	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00940000158121 #9	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154279 #14	ENSGT00940000154039.a.a.a.c	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37	ENSGT00940000161907	ENSGT00940000157396
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00940000156588	ENSGT00510000048998	ENSGT00940000162565	ENSGT00940000156114	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000162575 #7	ENSGT00940000158121 #9	ENSGT00910000147166	ENSGT00940000160086.f.a.b	ENSGT00390000004352 #10	ENSGT00940000163478	ENSGT00940000154279 #14	ENSGT00940000154039.a.a.a.c	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37	ENSGT00940000161907	ENSGT00940000157396	ENSGT00940000161918	ENSGT00830000128368.a
Monodontidae	ANCESTRAL SPECIES																	ENSGT00940000161868 #22
Narwhal	MODERN SPECIES	305	RNF103 (ENSMMNG00015005296)	RMND5A (ENSMMNG00015005282)	CD8A (ENSMMNG00015005262)	ENSMMNG00015005244	KRCC1 (ENSMMNG00015005228)	SMYD1 (ENSMMNG00015005196)	FABP1 (ENSMMNG00015005175)	THNSL2 (ENSMMNG00015005164)	FOXI3 (ENSMMNG00015005155) #7	EIF2AK3 (ENSMMNG00015005140) #9	ENSMMNG00015005130	ENSMMNG00015005119	RPIA (ENSMMNG00015020688) #10	IGKC (ENSMMNG00015020679)	ENSMMNG00015020669	PAX8 (ENSMMNG00015020622) #22	PSD4 (ENSMMNG00015020578) #23	IL1RN (ENSMMNG00015020548) #24	IL36RN (ENSMMNG00015020537) #26	ENSMMNG00015020514 #27	ENSMMNG00015020499 #29	IL1B (ENSMMNG00015020485) #31	ENSMMNG00015020474	IL1A (ENSMMNG00015020458) #32	CKAP2L (ENSMMNG00015020436) #33	SLC20A1 (ENSMMNG00015020377) #35	ENSMMNG00015020358	CHCHD5 (ENSMMNG00015020338) #36	POLR1B (ENSMMNG00015020275) #37	TTL (ENSMMNG00015020234)	ZC3H6 (ENSMMNG00015020215)
Vaquita	MODERN SPECIES	4	RNF103 (ENSPSNG00000010129)	RMND5A (ENSPSNG00000010178)	CD8A (ENSPSNG00000010269)	ENSPSNG00000010528	KRCC1 (ENSPSNG00000010603)	SMYD1 (ENSPSNG00000010676)	FABP1 (ENSPSNG00000010916)	THNSL2 (ENSPSNG00000011047)	FOXI3 (ENSPSNG00000011118) #7	EIF2AK3 (ENSPSNG00000011192) #9	ENSPSNG00000011435	ENSPSNG00000011450	RPIA (ENSPSNG00000011485) #10	ENSPSNG00000011698	ENSPSNG00000013047	PAX8 (ENSPSNG00000013113) #22	PSD4 (ENSPSNG00000013283) #23	IL1RN (ENSPSNG00000013351) #24	ENSPSNG00000013522	IL36RN (ENSPSNG00000013711) #26	ENSPSNG00000013793	IL36G (ENSPSNG00000013865) #29	IL1B (ENSPSNG00000014028) #31	IL1A (ENSPSNG00000014170) #32	CKAP2L (ENSPSNG00000014209) #33	SLC20A1 (ENSPSNG00000014537) #35	CHCHD5 (ENSPSNG00000014612) #36	POLR1B (ENSPSNG00000014722) #37	TTL (ENSPSNG00000015237)	ZC3H6 (ENSPSNG00000015307)	ZC3H8 (ENSPSNG00000015380)
Dolphin	MODERN SPECIES	172															ENSTTRG00000011957	PAX8 (ENSTTRG00000011948) #22	ENSTTRG00000011937 #23
Camelidae	ANCESTRAL SPECIES	56															ENSGT00940000154039.a.a.a	ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.kb.b.b.b #30	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37
Arabian camel	MODERN SPECIES	20	EIF2AK3 (ENSCDRG00005013101) #9	RPIA (ENSCDRG00005013052) #10	ENSCDRG00005013015	ENSCDRG00005012974	IGKV5-2 (ENSCDRG00005012952)	IGKV4-1 (ENSCDRG00005012938)	ENSCDRG00005012901	ENSCDRG00005012857 #11	ENSCDRG00005012837 #11	ENSCDRG00005012793 ##15	ENSCDRG00005012773 #12	ENSCDRG00005012747	ENSCDRG00005012735 #14	ENSCDRG00005012634 #11	ENSCDRG00005012601	PAX8 (ENSCDRG00005012432) #22	PSD4 (ENSCDRG00005012314) #23	IL1RN (ENSCDRG00005012168) #24	IL1F10 (ENSCDRG00005012124) #25	IL36RN (ENSCDRG00005012099) #26	ENSCDRG00005012049 #27	IL36A (ENSCDRG00005011983) #28	IL36G (ENSCDRG00005011890) #29	ENSCDRG00005011869	IL37 (ENSCDRG00005011413) #30	IL1B (ENSCDRG00005011340) #31	IL1A (ENSCDRG00005011294) #32	CKAP2L (ENSCDRG00005011243) #33	NT5DC4 (ENSCDRG00005011082) #34	SLC20A1 (ENSCDRG00005011004) #35	CHCHD5 (ENSCDRG00005010937) #36
Alpaca	MODERN SPECIES	220																ENSVPAG00000003973 #22
Suina	ANCESTRAL SPECIES	59																ENSGT00940000161868 #22	ENSGT00940000161976 #23	ENSGT00950000182943.kb.b.a.b.b.a #24	ENSGT00950000182943.kb.b.a.b.b.b #25	ENSGT00950000182943.kb.b.a.b.a #26	ENSGT00950000182943.kb.b.b.a.b #27	ENSGT00950000182943.kb.b.b.a.a.a #28	ENSGT00950000182943.kb.b.b.a.a.b #29	ENSGT00950000182943.jb #31	ENSGT00390000013353 #32	ENSGT00530000063691.a #33	ENSGT00940000162631 #34	ENSGT00390000014879.c.a #35	ENSGT00390000007919 #36	ENSGT00950000183132.B #37	ENSGT00940000161907
Chacoan peccary	MODERN SPECIES	937															ENSCWAG00000011508 #15	PAX8 (ENSCWAG00000010972) #22	PSD4 (ENSCWAG00000010821) #23	IL1RN (ENSCWAG00000010722) #24	IL1F10 (ENSCWAG00000010674) #25	IL36RN (ENSCWAG00000010643) #26	ENSCWAG00000010617 #27	IL36A (ENSCWAG00000010573) #28	IL36G (ENSCWAG00000010540) #29	IL1B (ENSCWAG00000010491) #31	IL1A (ENSCWAG00000010459) #32	CKAP2L (ENSCWAG00000012675) #33	SLC20A1 (ENSCWAG00000012621) #35	CHCHD5 (ENSCWAG00000012579) #36