Sarcopterygii	ANCESTRAL SPECIES	88												ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00970000198076	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT00390000007027	ENSGT00940000157721 #7	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190	ENSGT00940000156301
Amniota	ANCESTRAL SPECIES	9	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Mammalia	ANCESTRAL SPECIES	5	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Theria	ANCESTRAL SPECIES	3	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Eutheria	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Artiodactyla	ANCESTRAL SPECIES		ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417.u.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417.u.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Camelidae	ANCESTRAL SPECIES	11	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417.v.c.b #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Arabian camel	MODERN SPECIES	4	MYSM1 (ENSCDRG00005014258) #7	JUN (ENSCDRG00005014307) #8	FGGY (ENSCDRG00005014344) #9	HOOK1 (ENSCDRG00005014570) #10	ENSCDRG00005014670 #11	ENSCDRG00005015188 #12	C1orf87 (ENSCDRG00005015266) #13	NFIA (ENSCDRG00005015494) #14	TM2D1 (ENSCDRG00005015765) #15	PATJ (ENSCDRG00005015902) #16	KANK4 (ENSCDRG00005016599) #17	USP1 (ENSCDRG00005016803) #18	DOCK7 (ENSCDRG00005016867) #19	ANGPTL3 (ENSCDRG00005017333) #20	ATG4C (ENSCDRG00005003431) #21	FOXD3 (ENSCDRG00005003471) #22	ALG6 (ENSCDRG00005003516) #23	ITGB3BP (ENSCDRG00005003577) #24	EFCAB7 (ENSCDRG00005003668) #25	PGM1 (ENSCDRG00005003722) #26	ROR1 (ENSCDRG00005003848) #27	UBE2U (ENSCDRG00005003953) #28	CACHD1 (ENSCDRG00005004143) #29	RAVER2 (ENSCDRG00005004547) #30	ENSCDRG00005004583 #31	JAK1 (ENSCDRG00005004601) #32	ENSCDRG00005004652 #33	DNAJC6 (ENSCDRG00005004711) #34	LEPROT (ENSCDRG00005005302) #35	LEPR (ENSCDRG00005005388) #36	ENSCDRG00005005483 #37
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417.u.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Cetacea	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417.v #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243.c.a.a #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a.e #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000154277.a.b.b.m.b	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154169.A.l	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417.v #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243.c.a.a #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a.e #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000154277.a.b.b.m.b	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154169.A.l	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.k #35	ENSGT00730000111209 #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417.v #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243.c.a.a #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a.e #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000154277.a.b.b.m.b	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154169.A.l	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.k #35	ENSGT00730000111209 #36
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417.v #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00390000015470.m.a	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243.c.a.a #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a.e #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000154277.a.b.b.m.b	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154169.A.l	ENSGT00940000154568 #33	ENSGT00990000212760	ENSGT00390000017639.b	ENSGT00940000158755 #34
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417.v #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00390000015470.m.a	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243.c.a.a #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a.e #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000154277.a.b.b.m.b	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154169.A.l	ENSGT00940000154568 #33	ENSGT00990000212760	ENSGT00390000017639.b	ENSGT00940000158755 #34
Beluga whale	MODERN SPECIES	74	MYSM1 (ENSDLEG00000019577) #7	JUN (ENSDLEG00000019588) #8	FGGY (ENSDLEG00000019599) #9	HOOK1 (ENSDLEG00000019616) #10	CYP2J2 (ENSDLEG00000019634) #12	NFIA (ENSDLEG00000019647) #14	TM2D1 (ENSDLEG00000019664) #15	PATJ (ENSDLEG00000019785) #16	ENSDLEG00000020682	ENSDLEG00000020688	KANK4 (ENSDLEG00000020692) #17	USP1 (ENSDLEG00000020714) #18	DOCK7 (ENSDLEG00000010129) #19	ANGPTL3 (ENSDLEG00000021249) #20	ATG4C (ENSDLEG00000021255) #21	FOXD3 (ENSDLEG00000021257) #22	ALG6 (ENSDLEG00000021260) #23	ITGB3BP (ENSDLEG00000021262) #24	ENSDLEG00000021263	EFCAB7 (ENSDLEG00000021268) #25	PGM1 (ENSDLEG00000021272) #26	ROR1 (ENSDLEG00000021274) #27	UBE2U (ENSDLEG00000021278) #28	CACHD1 (ENSDLEG00000021280) #29	RAVER2 (ENSDLEG00000021287) #30	JAK1 (ENSDLEG00000021291) #32	ENSDLEG00000021294	ENSDLEG00000021295	ENSDLEG00000021299 #33	ENSDLEG00000021300	ENSDLEG00000021302
Narwhal	MODERN SPECIES	304	MYSM1 (ENSMMNG00015022102) #7	JUN (ENSMMNG00015022101) #8	FGGY (ENSMMNG00015022099) #9	HOOK1 (ENSMMNG00015022098) #10	CYP2J2 (ENSMMNG00015022097) #12	ENSMMNG00015022096 #13	NFIA (ENSMMNG00015022095) #14	TM2D1 (ENSMMNG00015022092) #15	PATJ (ENSMMNG00015022091) #16	ENSMMNG00015022090	KANK4 (ENSMMNG00015022089) #17	ENSMMNG00015022087 #18	ANGPTL3 (ENSMMNG00015022086) #20	DOCK7 (ENSMMNG00015022084) #19	ATG4C (ENSMMNG00015022082) #21	FOXD3 (ENSMMNG00015022081) #22	ALG6 (ENSMMNG00015022080) #23	ENSMMNG00015022076	ITGB3BP (ENSMMNG00015022074) #24	EFCAB7 (ENSMMNG00015022073) #25	PGM1 (ENSMMNG00015022072) #26	ROR1 (ENSMMNG00015022071) #27	UBE2U (ENSMMNG00015022070) #28	CACHD1 (ENSMMNG00015022069) #29	RAVER2 (ENSMMNG00015022068) #30	JAK1 (ENSMMNG00015022067) #32	ENSMMNG00015022065	ENSMMNG00015022064	ENSMMNG00015022063	ENSMMNG00015022062	ENSMMNG00015022054 #33
Vaquita	MODERN SPECIES		FGGY (ENSPSNG00000001878) #9	HOOK1 (ENSPSNG00000001959) #10	CYP2J2 (ENSPSNG00000002001) #12	ENSPSNG00000002024 #13	NFIA (ENSPSNG00000002205) #14	ENSPSNG00000002380	TM2D1 (ENSPSNG00000002408) #15	PATJ (ENSPSNG00000002448) #16	ENSPSNG00000002480	ENSPSNG00000002492	KANK4 (ENSPSNG00000002529) #17	USP1 (ENSPSNG00000002605) #18	DOCK7 (ENSPSNG00000002635) #19	ANGPTL3 (ENSPSNG00000002721) #20	ATG4C (ENSPSNG00000002761) #21	FOXD3 (ENSPSNG00000002801) #22	ALG6 (ENSPSNG00000002827) #23	ITGB3BP (ENSPSNG00000002857) #24	ENSPSNG00000002872	ENSPSNG00000002888	EFCAB7 (ENSPSNG00000002909) #25	PGM1 (ENSPSNG00000002952) #26	ROR1 (ENSPSNG00000003007) #27	UBE2U (ENSPSNG00000003039) #28	CACHD1 (ENSPSNG00000003080) #29	RAVER2 (ENSPSNG00000003159) #30	JAK1 (ENSPSNG00000003215) #32	ENSPSNG00000003242	ENSPSNG00000003270	ENSPSNG00000003289 #33	ENSPSNG00000003300
Sperm whale	MODERN SPECIES	15	MYSM1 (ENSPCTG00005022773) #7	HOOK1 (ENSPCTG00005022771) #10	FGGY (ENSPCTG00005022765) #9	CYP2J2 (ENSPCTG00005022760) #12	ENSPCTG00005022759 #13	NFIA (ENSPCTG00005022749) #14	TM2D1 (ENSPCTG00005022746) #15	ENSPCTG00005022745	PATJ (ENSPCTG00005022726) #16	ENSPCTG00005022724	KANK4 (ENSPCTG00005022722) #17	USP1 (ENSPCTG00005022719) #18	ANGPTL3 (ENSPCTG00005022717) #20	DOCK7 (ENSPCTG00005022710) #19	ENSPCTG00005022703 #21	FOXD3 (ENSPCTG00005022700) #22	ALG6 (ENSPCTG00005022695) #23	ENSPCTG00005022690	ENSPCTG00005022689	ITGB3BP (ENSPCTG00005022687) #24	EFCAB7 (ENSPCTG00005022682) #25	ROR1 (ENSPCTG00005022678) #27	UBE2U (ENSPCTG00005022676) #28	CACHD1 (ENSPCTG00005022667) #29	RAVER2 (ENSPCTG00005022653) #30	JAK1 (ENSPCTG00005022651) #32	ENSPCTG00005022639	AK4 (ENSPCTG00005022622) #33	DNAJC6 (ENSPCTG00005022551) #34	LEPROT (ENSPCTG00005022488) #35	LEPR (ENSPCTG00005022108) #36
Blue whale	MODERN SPECIES		FGGY (ENSBMSG00010001218) #9	HOOK1 (ENSBMSG00010001303) #10	CYP2J2 (ENSBMSG00010001319) #12	ENSBMSG00010001338 #13	NFIA (ENSBMSG00010001455) #14	TM2D1 (ENSBMSG00010001753) #15	PATJ (ENSBMSG00010001826) #16	ENSBMSG00010002038	KANK4 (ENSBMSG00010002062) #17	ENSBMSG00010002165	ENSBMSG00010002182 #18	DOCK7 (ENSBMSG00010002212) #19	ANGPTL3 (ENSBMSG00010002379) #20	ENSBMSG00010002413	ENSBMSG00010002428 #21	FOXD3 (ENSBMSG00010002458) #22	ALG6 (ENSBMSG00010002470) #23	ITGB3BP (ENSBMSG00010002488) #24	ENSBMSG00010002519	EFCAB7 (ENSBMSG00010002542) #25	PGM1 (ENSBMSG00010002593) #26	ROR1 (ENSBMSG00010002655) #27	UBE2U (ENSBMSG00010002698) #28	CACHD1 (ENSBMSG00010002730) #29	RAVER2 (ENSBMSG00010002835) #30	JAK1 (ENSBMSG00010002874) #32	ENSBMSG00010003046	ENSBMSG00010003053	ENSBMSG00010003064 #33	ENSBMSG00010003088	DNAJC6 (ENSBMSG00010003114) #34
Pecora	ANCESTRAL SPECIES	2	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417.u.a.b ##12	ENSGT00940000155417.u.a.a.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.j #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000155417.u.a.b.a.a.a ##12	ENSGT00940000155417.u.a.b.a.a.b ##12	ENSGT00940000155417.u.a.b.a.b ##12	ENSGT00940000155417.u.a.a.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.j #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000155417.u.a.b.a.a.a ##12	ENSGT00940000155417.u.a.b.a.a.b ##12	ENSGT00940000155417.u.a.a.b ##12	ENSGT00940000155417.u.a.a.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.j #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000159251 #10	ENSGT00940000155417.u.a.b.a.a.a ##12	ENSGT00940000155417.u.a.b.a.a.b ##12	ENSGT00940000155417.u.a.a.b ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.j #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Rambouillet Sheep	MODERN SPECIES		HOOK1 (ENSOARG00020023235) #10	CYP2J (ENSOARG00020023337) ##12	ENSOARG00020023639 #13	ENSOARG00020023663 ##12	NFIA (ENSOARG00020023719) #14	TM2D1 (ENSOARG00020024049) #15	PATJ (ENSOARG00020024177) #16	ENSOARG00020025242	ENSOARG00020025248	ENSOARG00020025257	KANK4 (ENSOARG00020025276) #17	USP1 (ENSOARG00020025306) #18	DOCK7 (ENSOARG00020025422) #19	ANGPTL3 (ENSOARG00020025829) #20	ATG4C (ENSOARG00020025832) #21	FOXD3 (ENSOARG00020025839) #22	ALG6 (ENSOARG00020025843) #23	ITGB3BP (ENSOARG00020025849) #24	ROR1 (ENSOARG00020025892) #27	UBE2U (ENSOARG00020025900) #28	CACHD1 (ENSOARG00020025918) #29	RAVER2 (ENSOARG00020025947) #30	JAK1 (ENSOARG00020025959) #32	ENSOARG00020025972 #33	DNAJC6 (ENSOARG00020025984) #34	LEPROT (ENSOARG00020026025) #35	LEPR (ENSOARG00020006509) #36	PDE4B (ENSOARG00020007182)	SGIP1 (ENSOARG00020007630)	ENSOARG00020008215	DYNLT5 (ENSOARG00020008255)
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000155417.u.a.b.a.a.b ##12	ENSGT00940000155417.u.a.a.b ##12	ENSGT00940000155417.u.a.a.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00740000117158	ENSGT00940000162456.p	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.j #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Bos	ANCESTRAL SPECIES		ENSGT00940000155417.u.a.b.a.a.b ##12	ENSGT00940000155417.u.a.a.b ##12	ENSGT00940000155417.u.a.a.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00740000117158	ENSGT00940000162456.p	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.u #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.j #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000155417.u.a.b.a.a.a.a ##12	ENSGT00940000155417.u.a.b.a.a.b ##12	ENSGT00940000155417.u.a.a.b ##12	ENSGT00940000155417.u.a.a.a ##12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00740000117158	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336.c.a #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.u #33	ENSGT00940000158755 #34	ENSGT00390000006503.a.i.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Cow	MODERN SPECIES	22	ENSBTAG00000053766 ##12	ENSBTAG00000051904 ##12	ENSBTAG00000051542 ##12	C3H1orf87 (ENSBTAG00000009481) #13	NFIA (ENSBTAG00000000074) #14	ENSBTAG00000009769	TM2D1 (ENSBTAG00000017161) #15	ENSBTAG00000046720	PATJ (ENSBTAG00000021975) #16	ENSBTAG00000047830	KANK4 (ENSBTAG00000014382) #17	USP1 (ENSBTAG00000020451) #18	ANGPTL3 (ENSBTAG00000021386) #20	DOCK7 (ENSBTAG00000019877) #19	ATG4C (ENSBTAG00000010124) #21	FOXD3 (ENSBTAG00000008501) #22	ALG6 (ENSBTAG00000030706) #23	ITGB3BP (ENSBTAG00000030710) #24	EFCAB7 (ENSBTAG00000002600) #25	PGM1 (ENSBTAG00000019011) #26	ROR1 (ENSBTAG00000012312) #27	UBE2U (ENSBTAG00000040268) #28	CACHD1 (ENSBTAG00000016455) #29	RAVER2 (ENSBTAG00000030686) #30	JAK1 (ENSBTAG00000003147) #32	AK4 (ENSBTAG00000030674) #33	DNAJC6 (ENSBTAG00000030749) #34	LEPROT (ENSBTAG00000005909) #35	LEPR (ENSBTAG00000005910) #36	MGC137454 (ENSBTAG00000030852)	PDE4B (ENSBTAG00000008636)
Siberian musk deer	MODERN SPECIES	339					ENSMMSG00000010635 #14	TM2D1 (ENSMMSG00000010559) #15	ENSMMSG00000010512	PATJ (ENSMMSG00000010039) #16	ENSMMSG00000009951	ENSMMSG00000009926	KANK4 (ENSMMSG00000009822) #17	ENSMMSG00000009774 #18	ANGPTL3 (ENSMMSG00000009744) #20	DOCK7 (ENSMMSG00000009564) #19	ATG4C (ENSMMSG00000009422) #21	FOXD3 (ENSMMSG00000009398) #22	ALG6 (ENSMMSG00000009336) #23	ITGB3BP (ENSMMSG00000009277) #24	EFCAB7 (ENSMMSG00000009202) #25	PGM1 (ENSMMSG00000009049) #26	ROR1 (ENSMMSG00000008912) #27	UBE2U (ENSMMSG00000008852) #28	CACHD1 (ENSMMSG00000008645) #29	RAVER2 (ENSMMSG00000008514) #30	JAK1 (ENSMMSG00000008290) #32	ENSMMSG00000008256	ENSMMSG00000008200 #33	ENSMMSG00000007989 #34	LEPROT (ENSMMSG00000007926) #35	LEPR (ENSMMSG00000007649) #36	PDE4B (ENSMMSG00000007306)
Yarkand deer	MODERN SPECIES	12	ENSCHYG00000013601 ##12	C1orf87 (ENSCHYG00000013337) #13	ENSCHYG00000013294	NFIA (ENSCHYG00000013049) #14	TM2D1 (ENSCHYG00000012921) #15	PATJ (ENSCHYG00000011502) #16	ENSCHYG00000011365	ENSCHYG00000011355	ENSCHYG00000011320	ENSCHYG00000011307	KANK4 (ENSCHYG00000011035) #17	USP1 (ENSCHYG00000010926) #18	ANGPTL3 (ENSCHYG00000010829) #20	DOCK7 (ENSCHYG00000010521) #19	ATG4C (ENSCHYG00000010279) #21	FOXD3 (ENSCHYG00000010241) #22	ALG6 (ENSCHYG00000010031) #23	ITGB3BP (ENSCHYG00000009805) #24	EFCAB7 (ENSCHYG00000009641) #25	PGM1 (ENSCHYG00000009453) #26	ROR1 (ENSCHYG00000009213) #27	UBE2U (ENSCHYG00000009046) #28	ENSCHYG00000009027	ENSCHYG00000008642 #29	ENSCHYG00000008481 #30	ENSCHYG00000008363 #32	ENSCHYG00000008325	ENSCHYG00000008297 #33	ENSCHYG00000007928 #34	ENSCHYG00000007822 #35	ENSCHYG00000007738 #36
Suina	ANCESTRAL SPECIES	27	ENSGT00940000159251 #10	ENSGT00940000155417.u.b.a ##12	ENSGT00940000155417.v.a.b #12	ENSGT00940000155417.v.a.a.b #12	ENSGT00940000155417.v.b #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000164101.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185
Pig	MODERN SPECIES	14	ENSSSCG00000061116 #12	C1orf87 (ENSSSCG00000003823) #13	ENSSSCG00000033042	ENSSSCG00000057014	ENSSSCG00000044064	ENSSSCG00000059647	NFIA (ENSSSCG00000023243) #14	TM2D1 (ENSSSCG00000038861) #15	PATJ (ENSSSCG00000039793) #16	ENSSSCG00000031640	KANK4 (ENSSSCG00000003821) #17	USP1 (ENSSSCG00000003820) #18	ANGPTL3 (ENSSSCG00000003819) #20	DOCK7 (ENSSSCG00000003818) #19	ATG4C (ENSSSCG00000003816) #21	FOXD3 (ENSSSCG00000032215) #22	ALG6 (ENSSSCG00000003815) #23	ENSSSCG00000042211	EFCAB7 (ENSSSCG00000003812) #25	ROR1 (ENSSSCG00000003811) #27	CACHD1 (ENSSSCG00000004829) #29	RAVER2 (ENSSSCG00000025672) #30	JAK1 (ENSSSCG00000003809) #32	ENSSSCG00000040337 #33	DNAJC6 (ENSSSCG00000003807) #34	LEPROT (ENSSSCG00000003806) #35	LEPR (ENSSSCG00000025188) #36	ENSSSCG00000040903	PDE4B (ENSSSCG00000003805)	SGIP1 (ENSSSCG00000025243)	DYNLT5 (ENSSSCG00000031352)
Chacoan peccary	MODERN SPECIES	54	ENSCWAG00000013744 ##12	ENSCWAG00000013698 #12	C1orf87 (ENSCWAG00000013603) #13	ENSCWAG00000013573	ENSCWAG00000013519	NFIA (ENSCWAG00000013155) #14	TM2D1 (ENSCWAG00000013044) #15	PATJ (ENSCWAG00000012251) #16	ENSCWAG00000012174	KANK4 (ENSCWAG00000011865) #17	USP1 (ENSCWAG00000011770) #18	ANGPTL3 (ENSCWAG00000011690) #20	DOCK7 (ENSCWAG00000011480) #19	ENSCWAG00000011429	ATG4C (ENSCWAG00000011374) #21	FOXD3 (ENSCWAG00000011349) #22	ALG6 (ENSCWAG00000011295) #23	EFCAB7 (ENSCWAG00000011246) #25	PGM1 (ENSCWAG00000011042) #26	ROR1 (ENSCWAG00000010877) #27	ENSCWAG00000010798 #28	CACHD1 (ENSCWAG00000010433) #29	RAVER2 (ENSCWAG00000010298) #30	JAK1 (ENSCWAG00000010234) #32	ENSCWAG00000010175 #33	DNAJC6 (ENSCWAG00000009899) #34	LEPROT (ENSCWAG00000009749) #35	LEPR (ENSCWAG00000009654) #36	PDE4B (ENSCWAG00000008615)	SGIP1 (ENSCWAG00000007878)	DYNLT5 (ENSCWAG00000007809)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Carnivora	ANCESTRAL SPECIES	1	ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t.f	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t.f	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t.f	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
lion	MODERN SPECIES	8	MYSM1 (ENSPLOG00000012253) #7	JUN (ENSPLOG00000012226) #8	FGGY (ENSPLOG00000012145) #9	HOOK1 (ENSPLOG00000011920) #10	CYP2J2 (ENSPLOG00000011809) #12	C1orf87 (ENSPLOG00000011637) #13	NFIA (ENSPLOG00000011140) #14	TM2D1 (ENSPLOG00000010892) #15	PATJ (ENSPLOG00000010662) #16	L1TD1 (ENSPLOG00000010511)	ENSPLOG00000010404 #17	USP1 (ENSPLOG00000010281) #18	ANGPTL3 (ENSPLOG00000010232) #20	DOCK7 (ENSPLOG00000008689) #19	ATG4C (ENSPLOG00000008193) #21	FOXD3 (ENSPLOG00000008178) #22	ALG6 (ENSPLOG00000008139) #23	ITGB3BP (ENSPLOG00000008062) #24	EFCAB7 (ENSPLOG00000007985) #25	PGM1 (ENSPLOG00000007875) #26	ROR1 (ENSPLOG00000007754) #27	ENSPLOG00000007699 #28	CACHD1 (ENSPLOG00000007467) #29	ENSPLOG00000007407	RAVER2 (ENSPLOG00000007347) #30	JAK1 (ENSPLOG00000007282) #32	ENSPLOG00000007171	ENSPLOG00000007140 #33	DNAJC6 (ENSPLOG00000006842) #34	LEPR (ENSPLOG00000006675) #36	PDE4B (ENSPLOG00000006308)
leopard	MODERN SPECIES	16	JUN (ENSPPRG00000020728) #8	FGGY (ENSPPRG00000022697) #9	HOOK1 (ENSPPRG00000000392) #10	CYP2J2 (ENSPPRG00000000574) #12	C1orf87 (ENSPPRG00000001614) #13	NFIA (ENSPPRG00000004851) #14	TM2D1 (ENSPPRG00000005809) #15	ENSPPRG00000009261 #16	ENSPPRG00000011020 #16	L1TD1 (ENSPPRG00000011113)	KANK4 (ENSPPRG00000013316) #17	USP1 (ENSPPRG00000013661) #18	ANGPTL3 (ENSPPRG00000013921) #20	DOCK7 (ENSPPRG00000007918) #19	ATG4C (ENSPPRG00000009565) #21	FOXD3 (ENSPPRG00000014919) #22	ALG6 (ENSPPRG00000011811) #23	ITGB3BP (ENSPPRG00000012409) #24	EFCAB7 (ENSPPRG00000012738) #25	PGM1 (ENSPPRG00000013727) #26	ENSPPRG00000013850	ROR1 (ENSPPRG00000017823) #27	UBE2U (ENSPPRG00000021247) #28	ENSPPRG00000023862	CACHD1 (ENSPPRG00000023686) #29	RAVER2 (ENSPPRG00000023350) #30	JAK1 (ENSPPRG00000022662) #32	ENSPPRG00000000367	ENSPPRG00000000962 #33	DNAJC6 (ENSPPRG00000002001) #34	LEPROT (ENSPPRG00000002176) #35
Cat	MODERN SPECIES	239	FGGY (ENSFCAG00000030121) #9	HOOK1 (ENSFCAG00000018198) #10	CYP2J2 (ENSFCAG00000011145) #12	C1orf87 (ENSFCAG00000011149) #13	NFIA (ENSFCAG00000005997) #14	TM2D1 (ENSFCAG00000000772) #15	PATJ (ENSFCAG00000005299) #16	L1TD1 (ENSFCAG00000042658)	KANK4 (ENSFCAG00000000371) #17	USP1 (ENSFCAG00000023269) #18	DOCK7 (ENSFCAG00000022720) #19	ANGPTL3 (ENSFCAG00000011284) #20	ATG4C (ENSFCAG00000027083) #21	ENSFCAG00000052912	ENSFCAG00000043193	FOXD3 (ENSFCAG00000045701) #22	ENSFCAG00000025108	ALG6 (ENSFCAG00000027407) #23	ITGB3BP (ENSFCAG00000025609) #24	EFCAB7 (ENSFCAG00000024580) #26	ROR1 (ENSFCAG00000013779) #27	UBE2U (ENSFCAG00000024149) #28	CACHD1 (ENSFCAG00000010902) #29	RAVER2 (ENSFCAG00000022781) #30	JAK1 (ENSFCAG00000001953) #32	AK4 (ENSFCAG00000033540) #33	DNAJC6 (ENSFCAG00000008367) #34	LEPR (ENSFCAG00000011703) #36	PDE4B (ENSFCAG00000030002)	SGIP1 (ENSFCAG00000011575)	DYNLT5 (ENSFCAG00000038222)
Caniformia	ANCESTRAL SPECIES	2	ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Canidae	ANCESTRAL SPECIES	11	ENSGT01000000214434.F #9	ENSGT00990000211939	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01100000266959	ENSGT01050000244818.t.d	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000156679.f	ENSGT00390000007084.c.a.e.a	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000154679.dc	ENSGT00940000157820.a.b	ENSGT01050000244818.t.d	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00530000063666.b.y.a.b.b	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000156679.f	ENSGT00390000007084.c.a.e.a	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00950000183030.m.a.b.a.b	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35
Dingo	MODERN SPECIES	373	ENSCAFG00020012805 #14	TM2D1 (ENSCAFG00020012812) #15	ENSCAFG00020012823 #16	ENSCAFG00020012901 #16	ENSCAFG00020012948	ENSCAFG00020012949	L1TD1 (ENSCAFG00020012951)	ENSCAFG00020012955 #17	ENSCAFG00020012959 #17	USP1 (ENSCAFG00020012966) #18	DOCK7 (ENSCAFG00020013336) #19	ANGPTL3 (ENSCAFG00020017900) #20	ATG4C (ENSCAFG00020017922) #21	ENSCAFG00020017929	ENSCAFG00020017930	FOXD3 (ENSCAFG00020017935) #22	ALG6 (ENSCAFG00020017936) #23	ITGB3BP (ENSCAFG00020017944) #24	EFCAB7 (ENSCAFG00020017957) #25	PGM1 (ENSCAFG00020017963) #26	ENSCAFG00020017973 #27	ROR1 (ENSCAFG00020017975) #27	UBE2U (ENSCAFG00020017979) #28	ENSCAFG00020018002	ENSCAFG00020018007	CACHD1 (ENSCAFG00020018033) #29	RAVER2 (ENSCAFG00020018120) #30	JAK1 (ENSCAFG00020018270) #32	ENSCAFG00020020417	ENSCAFG00020020420 #33	DNAJC6 (ENSCAFG00020020422) #34
Dog	MODERN SPECIES	33	CYP2J2 (ENSCAFG00845005961) #12	C5H1orf87 (ENSCAFG00845005904) #13	NFIA (ENSCAFG00845005661) #14	TM2D1 (ENSCAFG00845005499) #15	PATJ (ENSCAFG00845005350) #16	ENSCAFG00845005273	ENSCAFG00845005266	L1TD1 (ENSCAFG00845005257)	KANK4 (ENSCAFG00845005174) #17	USP1 (ENSCAFG00845005152) #18	ANGPTL3 (ENSCAFG00845005144) #20	DOCK7 (ENSCAFG00845005064) #19	ATG4C (ENSCAFG00845005004) #21	ENSCAFG00845004990	ENSCAFG00845004987	FOXD3 (ENSCAFG00845004983) #22	ALG6 (ENSCAFG00845004972) #23	ITGB3BP (ENSCAFG00845004941) #24	EFCAB7 (ENSCAFG00845004924) #25	PGM1 (ENSCAFG00845004898) #26	ENSCAFG00845004877	ROR1 (ENSCAFG00845004850) #27	UBE2U (ENSCAFG00845004817) #28	ENSCAFG00845004810	ENSCAFG00845004800	ENSCAFG00845004792	CACHD1 (ENSCAFG00845004709) #29	ENSCAFG00845004661	RAVER2 (ENSCAFG00845004615) #30	JAK1 (ENSCAFG00845004547) #32	ENSCAFG00845004516
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Ursidae	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT01030000238341	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Ursus	ANCESTRAL SPECIES	18			ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t.b	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000015224.c.b.b.a.b.b.a	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600
American black bear	MODERN SPECIES	3773																FOXD3 (ENSUAMG00000007532) #22	ALG6 (ENSUAMG00000007530) #23
Giant Panda	MODERN SPECIES	11	JUN (ENSAMEG00000029207) #8	FGGY (ENSAMEG00000000277) #9	HOOK1 (ENSAMEG00000000285) #10	CYP2J2 (ENSAMEG00000000342) #12	ENSAMEG00000000383 #13	NFIA (ENSAMEG00000011711) #14	TM2D1 (ENSAMEG00000011705) #15	PATJ (ENSAMEG00000011620) #16	L1TD1 (ENSAMEG00000014821)	KANK4 (ENSAMEG00000014824) #17	USP1 (ENSAMEG00000014832) #18	DOCK7 (ENSAMEG00000014852) #19	ANGPTL3 (ENSAMEG00000014967) #20	ATG4C (ENSAMEG00000014990) #21	ENSAMEG00000015017	FOXD3 (ENSAMEG00000025968) #22	ALG6 (ENSAMEG00000015024) #23	ITGB3BP (ENSAMEG00000025500) #24	EFCAB7 (ENSAMEG00000015027) #25	PGM1 (ENSAMEG00000015053) #26	ROR1 (ENSAMEG00000026239) #27	ENSAMEG00000015106 #28	CACHD1 (ENSAMEG00000015187) #29	RAVER2 (ENSAMEG00000015178) #30	JAK1 (ENSAMEG00000014980) #32	ENSAMEG00000020190	AK4 (ENSAMEG00000030587) #33	DNAJC6 (ENSAMEG00000014950) #34	LEPROT (ENSAMEG00000025091) #35	LEPR (ENSAMEG00000018031) #36	PDE4B (ENSAMEG00000018054)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Equus	ANCESTRAL SPECIES	3					ENSGT00390000008678 #13	ENSGT00940000172662	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818.t.h	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Donkey	MODERN SPECIES	7			ENSEASG00005008953 #13	ENSEASG00005027546	NFIA (ENSEASG00005008945) #14	ENSEASG00005008936 #15	PATJ (ENSEASG00005008849) #16	L1TD1 (ENSEASG00005008811)	KANK4 (ENSEASG00005008809) #17	USP1 (ENSEASG00005008805) #18	ENSEASG00005008801	ANGPTL3 (ENSEASG00005008790) #20	DOCK7 (ENSEASG00005008261) #19	ATG4C (ENSEASG00005008203) #21	ENSEASG00005027466	ENSEASG00005034981 #22	ALG6 (ENSEASG00005008197) #23	ITGB3BP (ENSEASG00005008189) #24	EFCAB7 (ENSEASG00005008181) #25	PGM1 (ENSEASG00005008175) #26	ROR1 (ENSEASG00005008170) #27	ENSEASG00005008168 #28	ENSEASG00005020139	ENSEASG00005008165	CACHD1 (ENSEASG00005008161) #29	RAVER2 (ENSEASG00005008158) #30	JAK1 (ENSEASG00005008150) #32	ENSEASG00005008138 #33	DNAJC6 (ENSEASG00005008132) #34	LEPROT (ENSEASG00005037559) #35	LEPR (ENSEASG00005008026) #36
Chiroptera	ANCESTRAL SPECIES		ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Greater horseshoe bat	MODERN SPECIES	27	ENSRFEG00010001627 #12	ENSRFEG00010001785 #12	ENSRFEG00010001873 #12	ENSRFEG00010002128 #12	ENSRFEG00010002144 #13	ENSRFEG00010002162	NFIA (ENSRFEG00010002359) #14	ENSRFEG00010002611	TM2D1 (ENSRFEG00010002648) #15	PATJ (ENSRFEG00010002868) #16	KANK4 (ENSRFEG00010003055) #17	USP1 (ENSRFEG00010003131) #18	DOCK7 (ENSRFEG00010003268) #19	ANGPTL3 (ENSRFEG00010003412) #20	ATG4C (ENSRFEG00010003453) #21	FOXD3 (ENSRFEG00010003478) #22	ENSRFEG00010003488	ALG6 (ENSRFEG00010003519) #23	ITGB3BP (ENSRFEG00010003573) #24	EFCAB7 (ENSRFEG00010003607) #25	PGM1 (ENSRFEG00010003661) #26	ROR1 (ENSRFEG00010003713) #27	ENSRFEG00010003748 #28	CACHD1 (ENSRFEG00010003774) #29	RAVER2 (ENSRFEG00010003831) #30	JAK1 (ENSRFEG00010003864) #32	ENSRFEG00010003929 #33	DNAJC6 (ENSRFEG00010003981) #34	LEPROT (ENSRFEG00010004090) #35	LEPR (ENSRFEG00010004114) #36	PDE4B (ENSRFEG00010004177)
Microbat	MODERN SPECIES	1000						ENSMLUG00000024011 #14	ENSMLUG00000008375 #14	TM2D1 (ENSMLUG00000028750) #15	PATJ (ENSMLUG00000006861) #16	KANK4 (ENSMLUG00000006932) #17	USP1 (ENSMLUG00000012439) #18	DOCK7 (ENSMLUG00000012444) #19	ANGPTL3 (ENSMLUG00000015497) #20	ATG4C (ENSMLUG00000029040) #21	ENSMLUG00000028331	FOXD3 (ENSMLUG00000006018) #22	ALG6 (ENSMLUG00000004045) #23	ITGB3BP (ENSMLUG00000004057) #24	EFCAB7 (ENSMLUG00000011542) #25	ENSMLUG00000023512	PGM1 (ENSMLUG00000012744) #26	ROR1 (ENSMLUG00000010560) #27	ENSMLUG00000010579 #28	CACHD1 (ENSMLUG00000007663) #29	ENSMLUG00000028943	RAVER2 (ENSMLUG00000007699) #30	JAK1 (ENSMLUG00000007723) #32	ENSMLUG00000009622 #33	DNAJC6 (ENSMLUG00000009642) #34	LEPROT (ENSMLUG00000028850) #35	LEPR (ENSMLUG00000016208) #36
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00910000148334
Primates	ANCESTRAL SPECIES	4	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214	ENSGT00940000155190
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214	ENSGT00940000155190
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668.e #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.b #33	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Mas night monkey	MODERN SPECIES	1222	HOOK1 (ENSANAG00000033388) #10	CYP2J2 (ENSANAG00000033520) #12	C1orf87 (ENSANAG00000023663) #13	NFIA (ENSANAG00000036346) #14	ENSANAG00000030015	ENSANAG00000003030	ENSANAG00000037649	ENSANAG00000034084 #15	PATJ (ENSANAG00000000542) #16	ENSANAG00000036983	KANK4 (ENSANAG00000036007) #17	USP1 (ENSANAG00000034698) #18	DOCK7 (ENSANAG00000016461) #19	ANGPTL3 (ENSANAG00000015249) #20	ATG4C (ENSANAG00000022513) #21	FOXD3 (ENSANAG00000002392) #22	ENSANAG00000029682	ALG6 (ENSANAG00000022443) #23	ITGB3BP (ENSANAG00000028085) #24	EFCAB7 (ENSANAG00000026634) #25	PGM1 (ENSANAG00000027470) #26	ROR1 (ENSANAG00000025721) #27	ENSANAG00000019274	UBE2U (ENSANAG00000033933) #28	CACHD1 (ENSANAG00000033660) #29	RAVER2 (ENSANAG00000025857) #30	ENSANAG00000032030	JAK1 (ENSANAG00000036647) #32	ENSANAG00000035974	ENSANAG00000018683	AK4 (ENSANAG00000003723) #33
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668.e #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243.e #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.b #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668.e #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243.e.a #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.b #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190
Capuchin	MODERN SPECIES	135						ENSCCAG00000002026	NFIA (ENSCCAG00000034568) #14	ENSCCAG00000037571 #15	ENSCCAG00000031088	PATJ (ENSCCAG00000020603) #16	KANK4 (ENSCCAG00000020881) #17	ENSCCAG00000032139 #18	ANGPTL3 (ENSCCAG00000037800) #20	DOCK7 (ENSCCAG00000036383) #19	ATG4C (ENSCCAG00000014124) #21	FOXD3 (ENSCCAG00000020242) #22	ENSCCAG00000037577	ALG6 (ENSCCAG00000026213) #23	ENSCCAG00000019669	ENSCCAG00000023464	ITGB3BP (ENSCCAG00000023808) #24	EFCAB7 (ENSCCAG00000030206) #25	PGM1 (ENSCCAG00000022674) #26	ROR1 (ENSCCAG00000036191) #27	UBE2U (ENSCCAG00000015166) #28	CACHD1 (ENSCCAG00000023418) #29	RAVER2 (ENSCCAG00000029834) #30	JAK1 (ENSCCAG00000021638) #32	ENSCCAG00000026470	AK4 (ENSCCAG00000027862) #33	ENSCCAG00000037501
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Orangutan	MODERN SPECIES		MYSM1 (ENSPPYG00000001296) #7	JUN (ENSPPYG00000001295) #8	FGGY (ENSPPYG00000001294) #9	HOOK1 (ENSPPYG00000001293) #10	CYP2J2 (ENSPPYG00000001292) #12	C1orf87 (ENSPPYG00000001291) #13	NFIA (ENSPPYG00000001290) #14	ENSPPYG00000001288 #15	PATJ (ENSPPYG00000001287) #16	L1TD1 (ENSPPYG00000001286)	KANK4 (ENSPPYG00000001285) #17	USP1 (ENSPPYG00000001284) #18	ANGPTL3 (ENSPPYG00000001283) #20	DOCK7 (ENSPPYG00000001280) #19	ATG4C (ENSPPYG00000001279) #21	FOXD3 (ENSPPYG00000001278) #22	ALG6 (ENSPPYG00000001277) #23	ITGB3BP (ENSPPYG00000001276) #24	EFCAB7 (ENSPPYG00000001275) #25	PGM1 (ENSPPYG00000029788) #26	ENSPPYG00000040176	ROR1 (ENSPPYG00000001274) #27	ENSPPYG00000001273 #28	CACHD1 (ENSPPYG00000001272) #29	RAVER2 (ENSPPYG00000001271) #30	JAK1 (ENSPPYG00000001270) #32	AK4 (ENSPPYG00000001269) #33	DNAJC6 (ENSPPYG00000010671) #34	LEPROT (ENSPPYG00000035587) #35	LEPR (ENSPPYG00000001267) #36	PDE4B (ENSPPYG00000001266)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214
Gorilla	MODERN SPECIES		CYP2J2 (ENSGGOG00000001607) #12	C1orf87 (ENSGGOG00000011908) #13	ENSGGOG00000027445 #14	ENSGGOG00000043710	ENSGGOG00000036939 #14	ENSGGOG00000043907	TM2D1 (ENSGGOG00000008515) #15	PATJ (ENSGGOG00000010129) #16	ENSGGOG00000023722	L1TD1 (ENSGGOG00000026365)	KANK4 (ENSGGOG00000041061) #17	USP1 (ENSGGOG00000024567) #18	DOCK7 (ENSGGOG00000025768) #19	ANGPTL3 (ENSGGOG00000003946) #20	ATG4C (ENSGGOG00000007252) #21	ENSGGOG00000027326 #22	ALG6 (ENSGGOG00000015986) #23	ITGB3BP (ENSGGOG00000004727) #24	EFCAB7 (ENSGGOG00000012467) #25	PGM1 (ENSGGOG00000016004) #26	ROR1 (ENSGGOG00000013797) #27	ENSGGOG00000043317	UBE2U (ENSGGOG00000001480) #28	CACHD1 (ENSGGOG00000007691) #29	RAVER2 (ENSGGOG00000016447) #30	JAK1 (ENSGGOG00000016456) #32	ENSGGOG00000025825	AK4 (ENSGGOG00000026644) #33	DNAJC6 (ENSGGOG00000010799) #34	LEPROT (ENSGGOG00000036673) #35	LEPR (ENSGGOG00000000076) #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214
Pan	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000162491.b.b	ENSGT00940000154568.q.a.b #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT01100000263543.a.g.a
Chimpanzee	MODERN SPECIES		HOOK1 (ENSPTRG00000000799) #10	CYP2J2 (ENSPTRG00000000800) #12	C1H1orf87 (ENSPTRG00000000801) #13	NFIA (ENSPTRG00000000802) #14	ENSPTRG00000045390	TM2D1 (ENSPTRG00000000803) #15	PATJ (ENSPTRG00000000806) #16	ENSPTRG00000052807	ENSPTRG00000044616	L1TD1 (ENSPTRG00000034387)	KANK4 (ENSPTRG00000000809) #17	USP1 (ENSPTRG00000000810) #18	DOCK7 (ENSPTRG00000000811) #19	ANGPTL3 (ENSPTRG00000000812) #20	ATG4C (ENSPTRG00000000813) #21	FOXD3 (ENSPTRG00000030580) #22	ALG6 (ENSPTRG00000000815) #23	ITGB3BP (ENSPTRG00000000816) #24	EFCAB7 (ENSPTRG00000030579) #25	PGM1 (ENSPTRG00000000820) #26	ROR1 (ENSPTRG00000024245) #27	ENSPTRG00000045538	UBE2U (ENSPTRG00000000822) #28	CACHD1 (ENSPTRG00000000823) #29	RAVER2 (ENSPTRG00000000824) #30	JAK1 (ENSPTRG00000000825) #32	ENSPTRG00000048144	AK4 (ENSPTRG00000000827) #33	DNAJC6 (ENSPTRG00000000829) #34	LEPROT (ENSPTRG00000046978) #35	ENSPTRG00000052596
Human	MODERN SPECIES		MYSM1 (ENSG00000162601) #7	JUN (ENSG00000177606) #8	FGGY (ENSG00000172456) #9	HOOK1 (ENSG00000134709) #10	CYP2J2 (ENSG00000134716) #12	C1orf87 (ENSG00000162598) #13	NFIA (ENSG00000162599) #14	TM2D1 (ENSG00000162604) #15	PATJ (ENSG00000132849) #16	L1TD1 (ENSG00000240563)	KANK4 (ENSG00000132854) #17	USP1 (ENSG00000162607) #18	DOCK7 (ENSG00000116641) #19	ANGPTL3 (ENSG00000132855) #20	ATG4C (ENSG00000125703) #21	FOXD3 (ENSG00000187140) #22	ALG6 (ENSG00000088035) #23	ITGB3BP (ENSG00000142856) #24	EFCAB7 (ENSG00000203965) #25	PGM1 (ENSG00000079739) #26	ROR1 (ENSG00000185483) #27	UBE2U (ENSG00000177414) #28	CACHD1 (ENSG00000158966) #29	RAVER2 (ENSG00000162437) #30	JAK1 (ENSG00000162434) #32	AK4 (ENSG00000162433) #33	DNAJC6 (ENSG00000116675) #34	LEPROT (ENSG00000213625) #35	LEPR (ENSG00000116678) #36	PDE4B (ENSG00000184588)	SGIP1 (ENSG00000118473)
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148334
Rhinopithecus	ANCESTRAL SPECIES	10	ENSGT01030000234578.B.b	ENSGT00390000017353	ENSGT00940000159669	ENSGT00940000160210	ENSGT00940000158688	ENSGT00910000147898	ENSGT00940000159534	ENSGT00940000161331	ENSGT00390000006247	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148334
Black snub-nosed monkey	MODERN SPECIES	569	HOOK1 (ENSRBIG00000004303) #10	CYP2J2 (ENSRBIG00000034286) #12	C1orf87 (ENSRBIG00000026690) #13	ENSRBIG00000019391	NFIA (ENSRBIG00000032076) #14	TM2D1 (ENSRBIG00000032068) #15	ENSRBIG00000034372	PATJ (ENSRBIG00000043813) #16	L1TD1 (ENSRBIG00000005782)	ENSRBIG00000035631 #17	USP1 (ENSRBIG00000041920) #18	ANGPTL3 (ENSRBIG00000033798) #20	DOCK7 (ENSRBIG00000036983) #19	ATG4C (ENSRBIG00000027148) #21	ENSRBIG00000026704	ENSRBIG00000026600 #22	ALG6 (ENSRBIG00000035347) #23	ITGB3BP (ENSRBIG00000037404) #24	EFCAB7 (ENSRBIG00000029286) #25	PGM1 (ENSRBIG00000035757) #26	ENSRBIG00000004039	ROR1 (ENSRBIG00000029149) #27	UBE2U (ENSRBIG00000044579) #28	CACHD1 (ENSRBIG00000044274) #29	RAVER2 (ENSRBIG00000044090) #30	JAK1 (ENSRBIG00000010792) #32	AK4 (ENSRBIG00000035967) #33	DNAJC6 (ENSRBIG00000036399) #34	LEPROT (ENSRBIG00000032071) #35	LEPR (ENSRBIG00000038066) #36	ENSRBIG00000035828
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148334
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d.d	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Macaca	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00390000012628.a.a.d.d	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36
Pig-tailed macaque	MODERN SPECIES	217	ENSMNEG00000033506	HOOK1 (ENSMNEG00000005935) #10	CYP2J2 (ENSMNEG00000029436) #12	C1orf87 (ENSMNEG00000039821) #13	ENSMNEG00000029281	NFIA (ENSMNEG00000033257) #14	TM2D1 (ENSMNEG00000034247) #15	PATJ (ENSMNEG00000022006) #16	ENSMNEG00000030822	L1TD1 (ENSMNEG00000030098)	KANK4 (ENSMNEG00000032440) #17	USP1 (ENSMNEG00000033298) #18	DOCK7 (ENSMNEG00000032463) #19	ANGPTL3 (ENSMNEG00000031218) #20	ATG4C (ENSMNEG00000038662) #21	FOXD3 (ENSMNEG00000021981) #22	ALG6 (ENSMNEG00000004099) #23	ITGB3BP (ENSMNEG00000029344) #24	EFCAB7 (ENSMNEG00000042983) #25	PGM1 (ENSMNEG00000039633) #26	ROR1 (ENSMNEG00000009711) #27	ENSMNEG00000034714
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00940000164709.a.b.b.a.a.b.a.a.a.a.b.a.a.a.b	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.b	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190
Rhesus	MODERN SPECIES		C1H1orf87 (ENSMMUG00000006756) #13	ENSMMUG00000052202	NFIA (ENSMMUG00000013840) #14	TM2D1 (ENSMMUG00000010931) #15	PATJ (ENSMMUG00000003113) #16	ENSMMUG00000064743	L1TD1 (ENSMMUG00000006485)	KANK4 (ENSMMUG00000010351) #17	USP1 (ENSMMUG00000002339) #18	ANGPTL3 (ENSMMUG00000046449) #20	DOCK7 (ENSMMUG00000002340) #19	ENSMMUG00000050619	ENSMMUG00000056324	ATG4C (ENSMMUG00000000386) #21	ENSMMUG00000058152	FOXD3 (ENSMMUG00000022350) #22	ALG6 (ENSMMUG00000020046) #23	ITGB3BP (ENSMMUG00000020047) #24	PGM1 (ENSMMUG00000020049) #26	ENSMMUG00000061816	ROR1 (ENSMMUG00000004668) #27	ENSMMUG00000056799	UBE2U (ENSMMUG00000012538) #28	CACHD1 (ENSMMUG00000007577) #29	ENSMMUG00000064480	RAVER2 (ENSMMUG00000018565) #30	JAK1 (ENSMMUG00000018566) #32	AK4 (ENSMMUG00000053254) #33	DNAJC6 (ENSMMUG00000017259) #34	LEPROT (ENSMMUG00000003264) #35	LEPR (ENSMMUG00000003265) #36
Crab-eating macaque	MODERN SPECIES		FGGY (ENSMFAG00000037904) #9	HOOK1 (ENSMFAG00000000847) #10	CYP2J2 (ENSMFAG00000003319) #12	C1orf87 (ENSMFAG00000044638) #13	NFIA (ENSMFAG00000045828) #14	TM2D1 (ENSMFAG00000040223) #15	ENSMFAG00000034621	PATJ (ENSMFAG00000044826) #16	L1TD1 (ENSMFAG00000031887)	KANK4 (ENSMFAG00000032159) #17	USP1 (ENSMFAG00000043530) #18	ANGPTL3 (ENSMFAG00000007083) #20	DOCK7 (ENSMFAG00000032390) #19	ENSMFAG00000058446	ATG4C (ENSMFAG00000038279) #21	FOXD3 (ENSMFAG00000052856) #22	ALG6 (ENSMFAG00000041396) #23	ENSMFAG00000040062 #24	EFCAB7 (ENSMFAG00000001765) #25	ENSMFAG00000022559	ROR1 (ENSMFAG00000041091) #27	UBE2U (ENSMFAG00000024825) #28	CACHD1 (ENSMFAG00000037670) #29	RAVER2 (ENSMFAG00000031436) #30	JAK1 (ENSMFAG00000003493) #32	AK4 (ENSMFAG00000029324) #33	DNAJC6 (ENSMFAG00000044659) #34	LEPROT (ENSMFAG00000033874) #35	LEPR (ENSMFAG00000001122) #36	PDE4B (ENSMFAG00000000162)	SGIP1 (ENSMFAG00000045356)
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.q.a.a.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148334	ENSGT00940000155190
Olive baboon	MODERN SPECIES		L1TD1 (ENSPANG00000021627)	ENSPANG00000038690	ENSPANG00000012982 #17	ENSPANG00000034374	ENSPANG00000011286	USP1 (ENSPANG00000024232) #18	DOCK7 (ENSPANG00000005717) #19	ANGPTL3 (ENSPANG00000025663) #20	ATG4C (ENSPANG00000020948) #21	ENSPANG00000049405	ENSPANG00000041773	ENSPANG00000043207	ENSPANG00000049429	ENSPANG00000048165	ENSPANG00000038350	FOXD3 (ENSPANG00000017676) #22	ALG6 (ENSPANG00000004754) #23	ITGB3BP (ENSPANG00000024945) #24	ENSPANG00000023471 #26	ROR1 (ENSPANG00000023470) #27	ENSPANG00000049418	ENSPANG00000031367	UBE2U (ENSPANG00000020216) #28	CACHD1 (ENSPANG00000010808) #29	RAVER2 (ENSPANG00000003396) #30	JAK1 (ENSPANG00000001284) #32	AK4 (ENSPANG00000012980) #33	DNAJC6 (ENSPANG00000006287) #34	LEPROT (ENSPANG00000003123) #35	ENSPANG00000017953 #36	ENSPANG00000047632 #36
Cercopithecinae_d	ANCESTRAL SPECIES	19	ENSGT00940000157721 #7	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00390000012628.b	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000162491.b.b	ENSGT00940000154568.q.a.a.b.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148334
Sooty mangabey	MODERN SPECIES	238	HOOK1 (ENSCATG00000041461) #10	CYP2J2 (ENSCATG00000040512) #12	C1orf87 (ENSCATG00000044396) #13	ENSCATG00000040049	NFIA (ENSCATG00000012748) #14	TM2D1 (ENSCATG00000041406) #15	ENSCATG00000037296	PATJ (ENSCATG00000039233) #16	L1TD1 (ENSCATG00000038295)	KANK4 (ENSCATG00000036371) #17	ENSCATG00000019757	USP1 (ENSCATG00000015135) #18	ANGPTL3 (ENSCATG00000012804) #20	DOCK7 (ENSCATG00000040198) #19	ATG4C (ENSCATG00000042641) #21	FOXD3 (ENSCATG00000018412) #22	ALG6 (ENSCATG00000042255) #23	ITGB3BP (ENSCATG00000041208) #24	EFCAB7 (ENSCATG00000034513) #25	PGM1 (ENSCATG00000043055) #26	ROR1 (ENSCATG00000032220) #27	UBE2U (ENSCATG00000040169) #28	CACHD1 (ENSCATG00000036728) #29	ENSCATG00000001153	RAVER2 (ENSCATG00000040658) #30	JAK1 (ENSCATG00000041174) #32	ENSCATG00000041319	AK4 (ENSCATG00000029189) #33	DNAJC6 (ENSCATG00000034774) #34	LEPROT (ENSCATG00000035075) #35	LEPR (ENSCATG00000032495) #36
Vervet Monkey	MODERN SPECIES	12	FGGY (ENSCSAG00000001328) #9	ENSCSAG00000001329	HOOK1 (ENSCSAG00000001330) #10	CYP2J2 (ENSCSAG00000001331) #12	C1orf87 (ENSCSAG00000001332) #13	ENSCSAG00000001333 #14	ENSCSAG00000001334 #14	TM2D1 (ENSCSAG00000001335) #15	PATJ (ENSCSAG00000001336) #16	L1TD1 (ENSCSAG00000001337)	KANK4 (ENSCSAG00000001338) #17	USP1 (ENSCSAG00000001339) #18	ANGPTL3 (ENSCSAG00000001340) #20	DOCK7 (ENSCSAG00000001341) #19	ATG4C (ENSCSAG00000001342) #21	FOXD3 (ENSCSAG00000000150) #22	ALG6 (ENSCSAG00000001343) #23	ITGB3BP (ENSCSAG00000001344) #24	EFCAB7 (ENSCSAG00000001345) #25	PGM1 (ENSCSAG00000001346) #26	ROR1 (ENSCSAG00000001347) #27	UBE2U (ENSCSAG00000001348) #28	CACHD1 (ENSCSAG00000001349) #29	RAVER2 (ENSCSAG00000001350) #30	JAK1 (ENSCSAG00000001351) #32	DNAJC6 (ENSCSAG00000001352) #34	LEPROT (ENSCSAG00000001353) #35	LEPR (ENSCSAG00000001354) #36	PDE4B (ENSCSAG00000001355)	SGIP1 (ENSCSAG00000001356)	DYNLT5 (ENSCSAG00000001357)
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214	ENSGT00940000155190
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00910000148214	ENSGT00940000155190
Mouse lemur	MODERN SPECIES	11	FGGY (ENSMICG00000013422) #9	HOOK1 (ENSMICG00000027305) #10	CYP2J90P (ENSMICG00000008762) #12	ENSMICG00000013472 #12	C1orf87 (ENSMICG00000013485) #13	NFIA (ENSMICG00000005075) #14	ENSMICG00000012681	ENSMICG00000014211 #15	PATJ (ENSMICG00000014246) #16	L1TD1 (ENSMICG00000045847)	KANK4 (ENSMICG00000001495) #17	USP1 (ENSMICG00000001502) #18	ANGPTL3 (ENSMICG00000001535) #20	DOCK7 (ENSMICG00000001507) #19	ATG4C (ENSMICG00000001538) #21	FOXD3 (ENSMICG00000044158) #22	ALG6 (ENSMICG00000000388) #23	ENSMICG00000046047 #24	ENSMICG00000042686	EFCAB7 (ENSMICG00000013626) #25	ENSMICG00000037361	ERICH3 (ENSMICG00000038155)	LRRC53 (ENSMICG00000044386)	TNNI3K (ENSMICG00000015807)	FPGT (ENSMICG00000047410)	NEGR1 (ENSMICG00000046222)	ENSMICG00000033235	ZRANB2 (ENSMICG00000033818)	ENSMICG00000047975	PTGER3 (ENSMICG00000011907)	ENSMICG00000043640
Lemuriformes_a	ANCESTRAL SPECIES	20	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Coquerels sifaka	MODERN SPECIES	162	CYP2J89 (ENSPCOG00000020225) #12	C1orf87 (ENSPCOG00000021292) #13	NFIA (ENSPCOG00000024842) #14	ENSPCOG00000013689	ENSPCOG00000026994	TM2D1 (ENSPCOG00000009377) #15	PATJ (ENSPCOG00000016693) #16	L1TD1 (ENSPCOG00000005879)	KANK4 (ENSPCOG00000016012) #17	USP1 (ENSPCOG00000027490) #18	ANGPTL3 (ENSPCOG00000017735) #20	ENSPCOG00000018206	DOCK7 (ENSPCOG00000015316) #19	ATG4C (ENSPCOG00000012978) #21	ENSPCOG00000001381	FOXD3 (ENSPCOG00000004911) #22	ALG6 (ENSPCOG00000013331) #23	ITGB3BP (ENSPCOG00000016479) #24	EFCAB7 (ENSPCOG00000022247) #25	PGM1 (ENSPCOG00000019160) #26	ROR1 (ENSPCOG00000013692) #27	UBE2U (ENSPCOG00000025850) #28	CACHD1 (ENSPCOG00000018645) #29	RAVER2 (ENSPCOG00000028379) #30	JAK1 (ENSPCOG00000018189) #32	ENSPCOG00000025120 #33	DNAJC6 (ENSPCOG00000021196) #34	LEPROT (ENSPCOG00000027148) #35	LEPR (ENSPCOG00000017023) #36	ENSPCOG00000016467	KCNMB2 (ENSPCOG00000021563)
Greater bamboo lemur	MODERN SPECIES	647																FOXD3 (ENSPSMG00000007018) #22	ALG6 (ENSPSMG00000006968) #23	ITGB3BP (ENSPSMG00000006890) #24	EFCAB7 (ENSPSMG00000006885) #25	PGM1 (ENSPSMG00000006861) #26	ROR1 (ENSPSMG00000006825) #27	UBE2U (ENSPSMG00000006796) #28	CACHD1 (ENSPSMG00000006786) #29	RAVER2 (ENSPSMG00000006729) #30	JAK1 (ENSPSMG00000006700) #32	ENSPSMG00000006649 #33	DNAJC6 (ENSPSMG00000006640) #34	LEPROT (ENSPSMG00000006583) #35	LEPR (ENSPSMG00000006503) #36	PDE4B (ENSPSMG00000006182)	SGIP1 (ENSPSMG00000005876)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Glires	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Rodentia	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Myomorpha	ANCESTRAL SPECIES	55	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00950000182879.b.a.b.b	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000155417.b #12	ENSGT00950000182879.b.a.b.a.a	ENSGT00940000155417.a.a #12	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00950000182879.b.a.b.b	ENSGT00940000155417.b #12	ENSGT00950000182879.b.a.b.a.a	ENSGT00950000182879.b.a.b.a.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.g.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00950000182879.b.a.a	ENSGT00940000155417.b #12	ENSGT00950000182879.b.a.b.a.a	ENSGT00950000182879.b.a.b.a.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.g.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Golden Hamster	MODERN SPECIES	662	ENSMAUG00000008711	ENSMAUG00000021213 #12	Cyp2j6 (ENSMAUG00000021242)	ENSMAUG00000003529	Gm12695 (ENSMAUG00000020018) #13	Nfia (ENSMAUG00000012950) #14	Tm2d1 (ENSMAUG00000017246) #15	Patj (ENSMAUG00000021478) #16	L1td1 (ENSMAUG00000020769)	Kank4 (ENSMAUG00000020783) #17	Usp1 (ENSMAUG00000010459) #18	Dock7 (ENSMAUG00000005545) #19	Angptl3 (ENSMAUG00000006669) #20	Atg4c (ENSMAUG00000017548) #21	ENSMAUG00000011992	Foxd3 (ENSMAUG00000008235) #22	Alg6 (ENSMAUG00000018206) #23	Itgb3bp (ENSMAUG00000019227) #24	Efcab7 (ENSMAUG00000012770) #25	Pgm1 (ENSMAUG00000000807) #26
Chinese hamster chok1gshd	MODERN SPECIES	111	Cyp2j6 (ENSCGRG00001017724)	ENSCGRG00001015523	Gm12695 (ENSCGRG00001014021) #13	Nfia (ENSCGRG00001000754) #14	Tm2d1 (ENSCGRG00001017276) #15	ENSCGRG00001014726	Patj (ENSCGRG00001024524) #16	L1td1 (ENSCGRG00001024238)	Kank4 (ENSCGRG00001023583) #17	Usp1 (ENSCGRG00001018963) #18	Angptl3 (ENSCGRG00001024053) #20	Dock7 (ENSCGRG00001017762) #19	ENSCGRG00001002780	Atg4c (ENSCGRG00001000630) #21	ENSCGRG00001002098	Foxd3 (ENSCGRG00001009393) #22	Alg6 (ENSCGRG00001024513) #23	Itgb3bp (ENSCGRG00001023317) #24	Efcab7 (ENSCGRG00001013291) #25	Pgm1 (ENSCGRG00001024185) #26	Ror1 (ENSCGRG00001015667) #27	ENSCGRG00001023231	Ube2u (ENSCGRG00001024744) #28	Cachd1 (ENSCGRG00001024125) #29	Raver2 (ENSCGRG00001011852) #30	Jak1 (ENSCGRG00001008727) #32	ENSCGRG00001003307 #33	ENSCGRG00001024354	Dnajc6 (ENSCGRG00001021227) #34	Leprot (ENSCGRG00001018267) #35	Lepr (ENSCGRG00001013297) #36
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00950000182879.b.a.b.b	ENSGT00940000155417.b #12	ENSGT00950000182879.b.a.b.a.a	ENSGT00950000182879.b.a.b.a.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.g.a #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Prairie vole	MODERN SPECIES	1	ENSMOCG00000005805 #12	Cyp2j6 (ENSMOCG00000018597)	ENSMOCG00000010318	Gm12695 (ENSMOCG00000013607) #13	Nfia (ENSMOCG00000007715) #14	ENSMOCG00000008446	Tm2d1 (ENSMOCG00000007667) #15	Patj (ENSMOCG00000020085) #16	L1td1 (ENSMOCG00000007037)	Kank4 (ENSMOCG00000020622) #17	Usp1 (ENSMOCG00000013703) #18	Dock7 (ENSMOCG00000012407) #19	Angptl3 (ENSMOCG00000010506) #20	Atg4c (ENSMOCG00000013316) #21	ENSMOCG00000021953	Foxd3 (ENSMOCG00000003755) #22	Alg6 (ENSMOCG00000007266) #23	Itgb3bp (ENSMOCG00000020964) #24	Efcab7 (ENSMOCG00000005332) #25	Pgm1 (ENSMOCG00000011278) #26	Ror1 (ENSMOCG00000010797) #27	ENSMOCG00000009548	ENSMOCG00000013769 #28	Cachd1 (ENSMOCG00000020004) #29	Raver2 (ENSMOCG00000018087) #30	Jak1 (ENSMOCG00000011865) #32	Ak4 (ENSMOCG00000014444) #33	Dnajc6 (ENSMOCG00000018708) #34	Leprot (ENSMOCG00000019296) #35	Lepr (ENSMOCG00000014570) #36	Pde4b (ENSMOCG00000017467)
Murinae	ANCESTRAL SPECIES	2	ENSGT00950000182879.b.a.b.b.d.a	ENSGT00940000155417.a.a #12	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b	ENSGT00940000155190
Mus	ANCESTRAL SPECIES	3	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00860000135704	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00860000136189	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00860000135728	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a
Mus_A	ANCESTRAL SPECIES	3	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00860000135704	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00860000136189	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00860000135728	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a
Mus_B	ANCESTRAL SPECIES	5	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00860000135704	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00860000136189	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00860000135728	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a
Mouse	MODERN SPECIES	13	Cyp2j6 (ENSMUSG00000052914)	Cyp2j9 (ENSMUSG00000015224) #12	Cyp2j5 (ENSMUSG00000052520)	Gm12695 (ENSMUSG00000078639) #13	E130114P18Rik (ENSMUSG00000048747)	Nfia (ENSMUSG00000028565) #14	Tm2d1 (ENSMUSG00000028563) #15	Patj (ENSMUSG00000061859) #16	L1td1 (ENSMUSG00000087166)	Kank4 (ENSMUSG00000035407) #17	I0C0044D17Rik (ENSMUSG00000073794)	Usp1 (ENSMUSG00000028560) #18	Dock7 (ENSMUSG00000028556) #19	Angptl3 (ENSMUSG00000028553) #20	Atg4c (ENSMUSG00000028550) #21	Foxd3 (ENSMUSG00000067261) #22	Alg6 (ENSMUSG00000073792) #23	Itgb3bp (ENSMUSG00000028549) #24	Efcab7 (ENSMUSG00000073791) #25	Pgm1 (ENSMUSG00000025791) #26	Ror1 (ENSMUSG00000035305) #27	Ube2u (ENSMUSG00000069733) #28	Cachd1 (ENSMUSG00000028532) #29	Raver2 (ENSMUSG00000035275) #30	Jak1 (ENSMUSG00000028530) #32	Ak4 (ENSMUSG00000028527) #33	Dnajc6 (ENSMUSG00000028528) #34	Leprot (ENSMUSG00000035212) #35	Lepr (ENSMUSG00000057722) #36	Pramel17 (ENSMUSG00000035201)	C130073F10Rik (ENSMUSG00000046133)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00950000182879.b.a.a	ENSGT00390000008678 #13	ENSGT00860000135704	ENSGT00860000136320	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00860000136189	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00860000136250	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00860000135728	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a
Steppe mouse	MODERN SPECIES	2950										Usp1 (ENSMSIG00000024787) #18	Dock7 (ENSMSIG00000024837) #19	Angptl3 (ENSMSIG00000025902) #20	ENSMSIG00000025935	Atg4c (ENSMSIG00000025942) #21	ENSMSIG00000025964	Foxd3 (ENSMSIG00000025994) #22	Alg6 (ENSMSIG00000026002) #23	ENSMSIG00000026028 #24	Efcab7 (ENSMSIG00000026059) #25	Pgm1 (ENSMSIG00000026111) #26
spretus	MODERN SPECIES	13	Cyp2j5 (MGP_SPRETEiJ_G0027146)	Gm12695 (MGP_SPRETEiJ_G0027147) #13	MGP_SPRETEiJ_G0027148	MGP_SPRETEiJ_G0027149	Nfia (MGP_SPRETEiJ_G0027150) #14	Tm2d1 (MGP_SPRETEiJ_G0027151) #15	Patj (MGP_SPRETEiJ_G0027152) #16	L1td1 (MGP_SPRETEiJ_G0027153)	Kank4 (MGP_SPRETEiJ_G0027154) #17	I0C0044D17Rik (MGP_SPRETEiJ_G0027155)	MGP_SPRETEiJ_G0027156 #18	Dock7 (MGP_SPRETEiJ_G0027157) #19	Angptl3 (MGP_SPRETEiJ_G0027158) #20	Atg4c (MGP_SPRETEiJ_G0027159) #21	MGP_SPRETEiJ_G0027160	Foxd3 (MGP_SPRETEiJ_G0027162) #22	Alg6 (MGP_SPRETEiJ_G0027163) #23	Itgb3bp (MGP_SPRETEiJ_G0027164) #24	Efcab7 (MGP_SPRETEiJ_G0027165) #25	Pgm1 (MGP_SPRETEiJ_G0027166) #26	Ror1 (MGP_SPRETEiJ_G0027167) #27	Ube2u (MGP_SPRETEiJ_G0027168) #28	Cachd1 (MGP_SPRETEiJ_G0027169) #29	MGP_SPRETEiJ_G0027170	Raver2 (MGP_SPRETEiJ_G0027171) #30	Jak1 (MGP_SPRETEiJ_G0027172) #32	Ak4 (MGP_SPRETEiJ_G0027173) #33	Dnajc6 (MGP_SPRETEiJ_G0027174) #34	Leprot (MGP_SPRETEiJ_G0027175) #35	Lepr (MGP_SPRETEiJ_G0027176) #36	MGP_SPRETEiJ_G0027177
Ryukyu mouse	MODERN SPECIES	13	Cyp2j5 (MGP_CAROLIEiJ_G0026178)	Gm12695 (MGP_CAROLIEiJ_G0026179) #13	MGP_CAROLIEiJ_G0026180	MGP_CAROLIEiJ_G0026181	Nfia (MGP_CAROLIEiJ_G0026182) #14	Tm2d1 (MGP_CAROLIEiJ_G0026183) #15	Patj (MGP_CAROLIEiJ_G0026184) #16	L1td1 (MGP_CAROLIEiJ_G0026185)	Kank4 (MGP_CAROLIEiJ_G0026186) #17	MGP_CAROLIEiJ_G0026187	MGP_CAROLIEiJ_G0026188 #18	Dock7 (MGP_CAROLIEiJ_G0026189) #19	Angptl3 (MGP_CAROLIEiJ_G0026190) #20	Atg4c (MGP_CAROLIEiJ_G0026191) #21	MGP_CAROLIEiJ_G0026192	Foxd3 (MGP_CAROLIEiJ_G0026193) #22	Alg6 (MGP_CAROLIEiJ_G0026194) #23	Itgb3bp (MGP_CAROLIEiJ_G0026195) #24	MGP_CAROLIEiJ_G0026196 #25	Pgm1 (MGP_CAROLIEiJ_G0026197) #26	Ror1 (MGP_CAROLIEiJ_G0026198) #27	Ube2u (MGP_CAROLIEiJ_G0026199) #28	Cachd1 (MGP_CAROLIEiJ_G0026200) #29	MGP_CAROLIEiJ_G0026201	Raver2 (MGP_CAROLIEiJ_G0026202) #30	Jak1 (MGP_CAROLIEiJ_G0026203) #32	Ak4 (MGP_CAROLIEiJ_G0026204) #33	Dnajc6 (MGP_CAROLIEiJ_G0026205) #34	Leprot (MGP_CAROLIEiJ_G0026206) #35	Lepr (MGP_CAROLIEiJ_G0026207) #36	MGP_CAROLIEiJ_G0026208
Shrew mouse	MODERN SPECIES	19	Cyp2j5 (MGP_PahariEiJ_G0028515)	Gm12695 (MGP_PahariEiJ_G0028516) #13	MGP_PahariEiJ_G0028517	MGP_PahariEiJ_G0028518	Nfia (MGP_PahariEiJ_G0028519) #14	Tm2d1 (MGP_PahariEiJ_G0028520) #15	Patj (MGP_PahariEiJ_G0028521) #16	L1td1 (MGP_PahariEiJ_G0028522)	Kank4 (MGP_PahariEiJ_G0028523) #17	MGP_PahariEiJ_G0028524	Usp1 (MGP_PahariEiJ_G0028525) #18	Dock7 (MGP_PahariEiJ_G0028526) #19	Angptl3 (MGP_PahariEiJ_G0028527) #20	Atg4c (MGP_PahariEiJ_G0028528) #21	MGP_PahariEiJ_G0028529	Foxd3 (MGP_PahariEiJ_G0028530) #22	Alg6 (MGP_PahariEiJ_G0028531) #23	Itgb3bp (MGP_PahariEiJ_G0028532) #24	MGP_PahariEiJ_G0028533 #25	Pgm1 (MGP_PahariEiJ_G0028534) #26	Ror1 (MGP_PahariEiJ_G0028535) #27	MGP_PahariEiJ_G0028536 #28	Cachd1 (MGP_PahariEiJ_G0028537) #29	MGP_PahariEiJ_G0028538	Raver2 (MGP_PahariEiJ_G0028539) #30	Jak1 (MGP_PahariEiJ_G0028540) #32	Ak4 (MGP_PahariEiJ_G0028541) #33	Dnajc6 (MGP_PahariEiJ_G0028542) #34	Leprot (MGP_PahariEiJ_G0028543) #35	Lepr (MGP_PahariEiJ_G0028544) #36	Pramel17 (MGP_PahariEiJ_G0028545)
Rat	MODERN SPECIES	15	Cyp2j16 (ENSRNOG00000030466)	Cyp2j3 (ENSRNOG00000031004) #12	C5h1orf87 (ENSRNOG00000026169) #13	ENSRNOG00000065127	Nfia (ENSRNOG00000006966) #14	AABR07049329.1 (ENSRNOG00000030107)	Tm2d1 (ENSRNOG00000007527) #15	Patj (ENSRNOG00000007551) #16	L1td1 (ENSRNOG00000050670)	Kank4 (ENSRNOG00000007779) #17	Usp1 (ENSRNOG00000007890) #18	Dock7 (ENSRNOG00000008298) #19	Angptl3 (ENSRNOG00000008638) #20	Atg4c (ENSRNOG00000008767) #21	ENSRNOG00000064901	Foxd3 (ENSRNOG00000066522) #22	Alg6 (ENSRNOG00000009045) #23	Itgb3bp (ENSRNOG00000009116) #24	Efcab7 (ENSRNOG00000009782) #25	Pgm1 (ENSRNOG00000009889) #26	Ror1 (ENSRNOG00000029449) #27	Ube2u (ENSRNOG00000023895) #28	Cachd1 (ENSRNOG00000010514) #29	Raver2 (ENSRNOG00000023812) #30	Jak1 (ENSRNOG00000011157) #32	Ak4 (ENSRNOG00000045738) #33	Dnajc6 (ENSRNOG00000052887) #34	Leprot (ENSRNOG00000050849) #35	Lepr (ENSRNOG00000023664) #36	ENSRNOG00000069037	ENSRNOG00000069853
Lesser Egyptian jerboa	MODERN SPECIES	98	Hook1 (ENSJJAG00000017805) #10	ENSJJAG00000016631 #12	ENSJJAG00000016230	ENSJJAG00000016141	ENSJJAG00000013782	Nfia (ENSJJAG00000012495) #14	ENSJJAG00000010329	Tm2d1 (ENSJJAG00000008343) #15	Patj (ENSJJAG00000022235) #16	ENSJJAG00000019020 #17	Usp1 (ENSJJAG00000017329) #18	Angptl3 (ENSJJAG00000016186) #20	Dock7 (ENSJJAG00000011659) #19	Atg4c (ENSJJAG00000016837) #21	ENSJJAG00000016061	Foxd3 (ENSJJAG00000015766) #22	Alg6 (ENSJJAG00000012437) #23	Efcab7 (ENSJJAG00000011831) #25	Pgm1 (ENSJJAG00000011313) #26	Ror1 (ENSJJAG00000010121) #27	ENSJJAG00000009546	Cachd1 (ENSJJAG00000007547) #29	ENSJJAG00000002474	Raver2 (ENSJJAG00000000374) #30	Jak1 (ENSJJAG00000022247) #32	ENSJJAG00000021591
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Hystricomorpha	ANCESTRAL SPECIES	44							ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Naked mole-rat female	MODERN SPECIES	10							NFIA (ENSHGLG00000017859) #14	TM2D1 (ENSHGLG00000041262) #15	PATJ (ENSHGLG00000014013) #16	ENSHGLG00000035291	ENSHGLG00000013193 #18	ANGPTL3 (ENSHGLG00000018269) #20	DOCK7 (ENSHGLG00000018341) #19	ATG4C (ENSHGLG00000046412) #21	ENSHGLG00000042394	FOXD3 (ENSHGLG00000043312) #22	ALG6 (ENSHGLG00000018273) #23	ENSHGLG00000017596 #24	EFCAB7 (ENSHGLG00000017587) #25	PGM1 (ENSHGLG00000017576) #26	ENSHGLG00000042916	ROR1 (ENSHGLG00000017565) #27	ENSHGLG00000050985	ENSHGLG00000040093	CACHD1 (ENSHGLG00000018425) #29	ENSHGLG00000020728	RAVER2 (ENSHGLG00000018409) #30	JAK1 (ENSHGLG00000018566) #32	ENSHGLG00000038659 #33	ENSHGLG00000047181	DNAJC6 (ENSHGLG00000018610) #34
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Marmotini	ANCESTRAL SPECIES		ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00910000147158	ENSGT00940000157668 #15	ENSGT00390000009895.i.b.b	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Marmotini_b	ANCESTRAL SPECIES	206											ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35
Squirrel	MODERN SPECIES	292											ENSSTOG00000029567	USP1 (ENSSTOG00000004952) #18	DOCK7 (ENSSTOG00000004984) #19	ANGPTL3 (ENSSTOG00000005071) #20	ATG4C (ENSSTOG00000012443) #21	FOXD3 (ENSSTOG00000023664) #22	ALG6 (ENSSTOG00000024670) #23	ITGB3BP (ENSSTOG00000030642) #24	EFCAB7 (ENSSTOG00000013534) #25	PGM1 (ENSSTOG00000007561) #26	ROR1 (ENSSTOG00000022807) #27	UBE2U (ENSSTOG00000032996) #28	CACHD1 (ENSSTOG00000009821) #29	RAVER2 (ENSSTOG00000009844) #30	JAK1 (ENSSTOG00000012422) #32	ENSSTOG00000023008 #33	DNAJC6 (ENSSTOG00000011000) #34	LEPROT (ENSSTOG00000021572) #35
Arctic ground squirrel	MODERN SPECIES	393											ENSUPAG00010015659 #17	USP1 (ENSUPAG00010015671) #18	DOCK7 (ENSUPAG00010015703) #19	ANGPTL3 (ENSUPAG00010016086) #20	ATG4C (ENSUPAG00010016097) #21	FOXD3 (ENSUPAG00010016144) #22	ALG6 (ENSUPAG00010016149) #23	ITGB3BP (ENSUPAG00010016157) #24	EFCAB7 (ENSUPAG00010016164) #25	PGM1 (ENSUPAG00010016171) #26	ROR1 (ENSUPAG00010016191) #27	ENSUPAG00010016215 #28
Eurasian red squirrel	MODERN SPECIES		C1orf87 (ENSSVLG00005003680) #13	NFIA (ENSSVLG00005003823) #14	TM2D1 (ENSSVLG00005003968) #15	PATJ (ENSSVLG00005004098) #16	ENSSVLG00005004503	L1TD1 (ENSSVLG00005004562)	KANK4 (ENSSVLG00005004588) #17	USP1 (ENSSVLG00005004642) #18	DOCK7 (ENSSVLG00005005302) #19	ANGPTL3 (ENSSVLG00005007525) #20	ENSSVLG00005007602	ENSSVLG00005007631	ENSSVLG00005007657	ATG4C (ENSSVLG00005007673) #21	ENSSVLG00005007744	FOXD3 (ENSSVLG00005007758) #22	ENSSVLG00005007774	ALG6 (ENSSVLG00005007804) #23	ITGB3BP (ENSSVLG00005007854) #24	EFCAB7 (ENSSVLG00005007917) #25	ENSSVLG00005008005 #26	ENSSVLG00005008103 #26	ROR1 (ENSSVLG00005008154) #27	ENSSVLG00005008279 #28	CACHD1 (ENSSVLG00005008345) #29	RAVER2 (ENSSVLG00005008615) #30	JAK1 (ENSSVLG00005010529) #32	ENSSVLG00005010609	ENSSVLG00005010636	ENSSVLG00005010654 #33	DNAJC6 (ENSSVLG00005010809) #34
Atlantogenata	ANCESTRAL SPECIES	11	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT01050000244818	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Afrotheria	ANCESTRAL SPECIES	21	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Afrotheria_a	ANCESTRAL SPECIES	20	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00940000155417 #12	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185
Elephant	MODERN SPECIES	145	FGGY (ENSLAFG00000013080) #9	HOOK1 (ENSLAFG00000013082) #10	ENSLAFG00000013089 #12	ENSLAFG00000011542 #12	ENSLAFG00000022626 #12	C1orf87 (ENSLAFG00000012275) #13	ENSLAFG00000025943 #14	ENSLAFG00000031230 #14	TM2D1 (ENSLAFG00000013979) #15	PATJ (ENSLAFG00000007961) #16	KANK4 (ENSLAFG00000007974) #17	USP1 (ENSLAFG00000023157) #18	ANGPTL3 (ENSLAFG00000002419) #20	DOCK7 (ENSLAFG00000002410) #19	ATG4C (ENSLAFG00000009126) #21	FOXD3 (ENSLAFG00000003874) #22	ALG6 (ENSLAFG00000002400) #23	EFCAB7 (ENSLAFG00000004814) #25	PGM1 (ENSLAFG00000004820) #26	ROR1 (ENSLAFG00000012631) #27	ENSLAFG00000012636 #28	CACHD1 (ENSLAFG00000009161) #29	RAVER2 (ENSLAFG00000012508) #30	JAK1 (ENSLAFG00000003730) #32	ENSLAFG00000008098 #33	DNAJC6 (ENSLAFG00000008887) #34	LEPROT (ENSLAFG00000030966) #35	LEPR (ENSLAFG00000003592) #36	PDE4B (ENSLAFG00000018427)	SGIP1 (ENSLAFG00000015802)	DYNLT5 (ENSLAFG00000015819)
Xenarthra	ANCESTRAL SPECIES	929																ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26
Armadillo	MODERN SPECIES	541														ENSDNOG00000035243	ENSDNOG00000031189	FOXD3 (ENSDNOG00000005013) #22	ALG6 (ENSDNOG00000046375) #23	ITGB3BP (ENSDNOG00000002813) #24	EFCAB7 (ENSDNOG00000002814) #25	PGM1 (ENSDNOG00000000223) #26	TNIP3 (ENSDNOG00000014154)	NDNF (ENSDNOG00000016592)
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00980000203176	ENSGT00390000018600
Marsupialia_b	ANCESTRAL SPECIES	27	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B.b #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00980000203176	ENSGT00390000018600
Diprotodontia	ANCESTRAL SPECIES	39	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b.c	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B.b #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00980000203176	ENSGT00390000018600
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b.c.a.a	ENSGT00950000182879.b.c.a.b	ENSGT00950000182879.b.d.b	ENSGT00390000008678 #13	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B.b #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00980000203176	ENSGT00390000018600
Common wonbat	MODERN SPECIES	612	HOOK1 (ENSVURG00010007915) #10	ENSVURG00010007958	ENSVURG00010008025	ENSVURG00010008037	C1orf87 (ENSVURG00010008051) #13	ENSVURG00010008072	ENSVURG00010008077	NFIA (ENSVURG00010008122) #14	TM2D1 (ENSVURG00010008155) #15	PATJ (ENSVURG00010008173) #16	KANK4 (ENSVURG00010008241) #17	USP1 (ENSVURG00010008279) #18	DOCK7 (ENSVURG00010008347) #19	ANGPTL3 (ENSVURG00010009124) #20	ATG4C (ENSVURG00010009137) #21	FOXD3 (ENSVURG00010009156) #22	ALG6 (ENSVURG00010009169) #23	ENSVURG00010009182 #24	EFCAB7 (ENSVURG00010009191) #25	PGM1 (ENSVURG00010009200) #26	ROR1 (ENSVURG00010009211) #27	ENSVURG00010009222 #28	ENSVURG00010009231	ENSVURG00010009238
Sauria	ANCESTRAL SPECIES	7	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Archelosauria	ANCESTRAL SPECIES	9	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Archosauria	ANCESTRAL SPECIES	11	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Aves	ANCESTRAL SPECIES	7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Neognathae	ANCESTRAL SPECIES	8	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190	ENSGT00940000156301
Galloanserae	ANCESTRAL SPECIES	8	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190	ENSGT00940000156301
Anatidae	ANCESTRAL SPECIES	5	ENSGT00940000165489.c	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301.h	ENSGT00940000156301.g
Pink-footed goose	MODERN SPECIES	1	JUN (ENSABRG00000022465) #8	FGGY (ENSABRG00000022463) #9	ENSABRG00000022462	HOOK1 (ENSABRG00000022460) #10	ENSABRG00000022457	ENSABRG00000022451	NFIA (ENSABRG00000022372) #14	TM2D1 (ENSABRG00000022358) #15	PATJ (ENSABRG00000022286) #16	KANK4 (ENSABRG00000022228) #17	USP1 (ENSABRG00000022213) #18	ANGPTL3 (ENSABRG00000022210) #20	DOCK7 (ENSABRG00000019817) #19	ATG4C (ENSABRG00000019118) #21	ENSABRG00000019030	FOXD3 (ENSABRG00000019027) #22	ALG6 (ENSABRG00000018752) #23	ITGB3BP (ENSABRG00000018646) #24	EFCAB7 (ENSABRG00000018592) #25	PGM1 (ENSABRG00000018513) #26	ROR1 (ENSABRG00000018481) #27	CACHD1 (ENSABRG00000018462) #29	RAVER2 (ENSABRG00000018443) #30	JAK1 (ENSABRG00000018398) #32	ENSABRG00000018361 #33	ENSABRG00000018350	DNAJC6 (ENSABRG00000018320) #34	LEPROT (ENSABRG00000018309) #35	LEPR (ENSABRG00000018132) #36	ENSABRG00000018063	PDE4B (ENSABRG00000018047)
Phasianidae	ANCESTRAL SPECIES	7	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j.g.a.b.a	ENSGT00950000182879.b.j.g.a.a	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092.e #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190	ENSGT00940000156301
Japanese quail	MODERN SPECIES	26	ENSCJPG00005012423	ENSCJPG00005012424	ENSCJPG00005012425	ENSCJPG00005012426	ENSCJPG00005012427	ENSCJPG00005012428	NFIA (ENSCJPG00005012429) #14	TM2D1 (ENSCJPG00005012430) #15	ENSCJPG00005012431 #16	ENSCJPG00005012612 #16	KANK4 (ENSCJPG00005012614) #17	USP1 (ENSCJPG00005012615) #18	DOCK7 (ENSCJPG00005012616) #19	ANGPTL3 (ENSCJPG00005014484) #20	ATG4C (ENSCJPG00005014485) #21	FOXD3 (ENSCJPG00005014487) #22	ALG6 (ENSCJPG00005014488) #23	ENSCJPG00005014489 #24	EFCAB7 (ENSCJPG00005014490) #25	PGM1 (ENSCJPG00005014491) #26	ROR1 (ENSCJPG00005014492) #27	CACHD1 (ENSCJPG00005014494) #29	RAVER2 (ENSCJPG00005014495) #30	JAK1 (ENSCJPG00005014496) #32	ENSCJPG00005014497	ENSCJPG00005014499 #33	DNAJC6 (ENSCJPG00005014500) #34	LEPROT (ENSCJPG00005014501) #35	LEPR (ENSCJPG00005014502) #36	PDE4B (ENSCJPG00005014503)	SGIP1 (ENSCJPG00005014504)
Neognathae_b	ANCESTRAL SPECIES	10	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00950000183297	ENSGT00940000155190	ENSGT00940000156301
Passeriformes	ANCESTRAL SPECIES	8	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00950000183297	ENSGT00940000155190	ENSGT00940000156301
Great tit	MODERN SPECIES	28	MYSM1 (ENSPMJG00000003434) #7	ENSPMJG00000003443	JUN (ENSPMJG00000003457) #8	FGGY (ENSPMJG00000003463) #9	HOOK1 (ENSPMJG00000003572) #10	ENSPMJG00000003575	ENSPMJG00000003577	NFIA (ENSPMJG00000003614) #14	TM2D1 (ENSPMJG00000003648) #15	PATJ (ENSPMJG00000003672) #16	KANK4 (ENSPMJG00000004587) #17	USP1 (ENSPMJG00000004620) #18	DOCK7 (ENSPMJG00000004670) #19	ANGPTL3 (ENSPMJG00000012329) #20	ATG4C (ENSPMJG00000012330) #21	FOXD3 (ENSPMJG00000012331) #22	ALG6 (ENSPMJG00000012332) #23	ITGB3BP (ENSPMJG00000012333) #24	EFCAB7 (ENSPMJG00000012335) #25	PGM1 (ENSPMJG00000012336) #26	ENSPMJG00000012337	ROR1 (ENSPMJG00000012338) #27	ENSPMJG00000012339	CACHD1 (ENSPMJG00000012341) #29	RAVER2 (ENSPMJG00000012342) #30	JAK1 (ENSPMJG00000012343) #32	ENSPMJG00000012345 #33	DNAJC6 (ENSPMJG00000012346) #34	LEPROT (ENSPMJG00000012347) #35	LEPR (ENSPMJG00000012348) #36	PDE4B (ENSPMJG00000012349)
Passeriformes_d	ANCESTRAL SPECIES	9	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i.f	ENSGT00950000182879.b.i.e.a	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT01040000244779	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568.f #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00950000183297	ENSGT00940000155190	ENSGT00940000156301
Passeriformes_g	ANCESTRAL SPECIES	10	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i.f	ENSGT00950000182879.b.i.e.a	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT01040000244779	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092.g #32	ENSGT00940000154568.e #33	ENSGT00940000154568.f #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Passeroidea	ANCESTRAL SPECIES	9	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i.e.a	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT01040000244779	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092.g #32	ENSGT00940000154568.e #33	ENSGT00940000154568.f #33	ENSGT00940000158755.o #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301
Zebra finch	MODERN SPECIES	30	FGGY (ENSTGUG00000009695) #9	HOOK1 (ENSTGUG00000009700) #10	ENSTGUG00000009722	ENSTGUG00000016903	ENSTGUG00000013940	ENSTGUG00000027591	NFIA (ENSTGUG00000009745) #14	TM2D1 (ENSTGUG00000009771) #15	PATJ (ENSTGUG00000009783) #16	ENSTGUG00000023986 #17	ENSTGUG00000028251 #17	USP1 (ENSTGUG00000009799) #18	ANGPTL3 (ENSTGUG00000009863) #20	DOCK7 (ENSTGUG00000009812) #19	ATG4C (ENSTGUG00000009870) #21	FOXD3 (ENSTGUG00000028147) #22	ALG6 (ENSTGUG00000009888) #23	ENSTGUG00000009904 #24	ENSTGUG00000009906 #25	PGM1 (ENSTGUG00000018846) #26	ENSTGUG00000009942 #27	ENSTGUG00000028636 #25	ENSTGUG00000009917 #26	ENSTGUG00000023239 #27	ENSTGUG00000009951 #29	ENSTGUG00000009973 #30	ENSTGUG00000029078 #32	ENSTGUG00000010010 #33	ENSTGUG00000010011 #34	ENSTGUG00000029515 #35	ENSTGUG00000021083 #36
Common canary	MODERN SPECIES	9	ENSSCAG00000006585	ENSSCAG00000006589	JUN (ENSSCAG00000006591) #8	FGGY (ENSSCAG00000006601) #9	HOOK1 (ENSSCAG00000006621) #10	ENSSCAG00000006628	ENSSCAG00000006630	NFIA (ENSSCAG00000006651) #14	TM2D1 (ENSSCAG00000006671) #15	PATJ (ENSSCAG00000006679) #16	ENSSCAG00000006704 #17	USP1 (ENSSCAG00000006713) #18	DOCK7 (ENSSCAG00000006729) #19	ANGPTL3 (ENSSCAG00000006769) #20	ATG4C (ENSSCAG00000006779) #21	FOXD3 (ENSSCAG00000006785) #22	ALG6 (ENSSCAG00000006788) #23	ITGB3BP (ENSSCAG00000006795) #24	EFCAB7 (ENSSCAG00000006806) #25	PGM1 (ENSSCAG00000006814) #26	ENSSCAG00000006819	ENSSCAG00000006829 #32	CACHD1 (ENSSCAG00000006858) #29	RAVER2 (ENSSCAG00000006952) #30	ENSSCAG00000006966 #32	ROR1 (ENSSCAG00000006973) #27	ENSSCAG00000006982 #33	DNAJC6 (ENSSCAG00000006996) #34	LEPROT (ENSSCAG00000007003) #35	ENSSCAG00000007007 #27	LEPR (ENSSCAG00000007012) #36
Neognathae_c	ANCESTRAL SPECIES	7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185
Kakapo	MODERN SPECIES	25	JUN (ENSSHBG00005006800) #8	FGGY (ENSSHBG00005006852) #9	HOOK1 (ENSSHBG00005006978) #10	ENSSHBG00005007019	ENSSHBG00005007065	ENSSHBG00005007084	ENSSHBG00005007122	NFIA (ENSSHBG00005007257) #14	TM2D1 (ENSSHBG00005007443) #15	PATJ (ENSSHBG00005007846) #16	KANK4 (ENSSHBG00005011530) #17	USP1 (ENSSHBG00005011553) #18	DOCK7 (ENSSHBG00005011629) #19	ANGPTL3 (ENSSHBG00005011851) #20	ENSSHBG00005011870 #21	FOXD3 (ENSSHBG00005011888) #22	ALG6 (ENSSHBG00005011906) #23	ITGB3BP (ENSSHBG00005011923) #24	EFCAB7 (ENSSHBG00005011937) #25	PGM1 (ENSSHBG00005011955) #26	ROR1 (ENSSHBG00005011980) #27	CACHD1 (ENSSHBG00005012051) #29	RAVER2 (ENSSHBG00005012257) #30	JAK1 (ENSSHBG00005012461) #32	ENSSHBG00005015430 #33	DNAJC6 (ENSSHBG00005015435) #34	LEPROT (ENSSHBG00005015439) #35	LEPR (ENSSHBG00005015452) #36	ENSSHBG00005015488	ENSSHBG00005015495	SGIP1 (ENSSHBG00005015507)
Golden eagle	MODERN SPECIES	3	JUN (ENSACCG00020017021) #8	FGGY (ENSACCG00020017022) #9	ENSACCG00020017023	HOOK1 (ENSACCG00020017024) #10	ENSACCG00020017025	ENSACCG00020017026	NFIA (ENSACCG00020017028) #14	TM2D1 (ENSACCG00020017029) #15	PATJ (ENSACCG00020017030) #16	KANK4 (ENSACCG00020017031) #17	USP1 (ENSACCG00020017032) #18	DOCK7 (ENSACCG00020017033) #19	ANGPTL3 (ENSACCG00020017034) #20	ATG4C (ENSACCG00020017035) #21	ENSACCG00020017036	FOXD3 (ENSACCG00020017037) #22	ALG6 (ENSACCG00020017038) #23	ITGB3BP (ENSACCG00020017039) #24	EFCAB7 (ENSACCG00020017040) #25	PGM1 (ENSACCG00020017041) #26	ROR1 (ENSACCG00020017042) #27	CACHD1 (ENSACCG00020017043) #29	RAVER2 (ENSACCG00020017044) #30	JAK1 (ENSACCG00020017045) #32	ENSACCG00020017047 #33	DNAJC6 (ENSACCG00020017048) #34	LEPROT (ENSACCG00020017049) #35	LEPR (ENSACCG00020017050) #36	ENSACCG00020017051	ENSACCG00020017052	SGIP1 (ENSACCG00020017053)
Cryptodira	ANCESTRAL SPECIES	8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668.g #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00950000183297
Testudinidae	ANCESTRAL SPECIES	33	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668.g #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190.m.a
Abingdon island giant tortoise	MODERN SPECIES	1894	ENSCABG00000023137	C1orf87 (ENSCABG00000023136) #13	ENSCABG00000023135	PREB (ENSCABG00000023133)	ENSCABG00000023132	NFIA (ENSCABG00000023129) #14	TM2D1 (ENSCABG00000023128) #15	PATJ (ENSCABG00000023127) #16	KANK4 (ENSCABG00000023126) #17	USP1 (ENSCABG00000023125) #18	ENSCABG00000023124 #19	ENSCABG00000023123 #19	ANGPTL3 (ENSCABG00000023122) #20	ENSCABG00000023121 #19	ATG4C (ENSCABG00000023120) #21	FOXD3 (ENSCABG00000023119) #22	ALG6 (ENSCABG00000023118) #23	ENSCABG00000023117 #24	EFCAB7 (ENSCABG00000023116) #25	PGM1 (ENSCABG00000023115) #26	ROR1 (ENSCABG00000023113) #27	UBE2U (ENSCABG00000023112) #28	CACHD1 (ENSCABG00000023111) #29
Goode s thornscrub tortoise	MODERN SPECIES	22	ENSGEVG00005020776	ENSGEVG00005020762	ENSGEVG00005020753	ENSGEVG00005020736	ENSGEVG00005020724	C1orf87 (ENSGEVG00005020715) #13	ENSGEVG00005020704	NFIA (ENSGEVG00005020696) #14	TM2D1 (ENSGEVG00005020691) #15	PATJ (ENSGEVG00005020682) #16	ENSGEVG00005020678 #17	USP1 (ENSGEVG00005020673) #18	ANGPTL3 (ENSGEVG00005020668) #20	DOCK7 (ENSGEVG00005016039) #19	ATG4C (ENSGEVG00005013428) #21	FOXD3 (ENSGEVG00005013403) #22	ALG6 (ENSGEVG00005013369) #23	ITGB3BP (ENSGEVG00005013329) #24	EFCAB7 (ENSGEVG00005013265) #25	PGM1 (ENSGEVG00005013164) #26	ROR1 (ENSGEVG00005012980) #27	UBE2U (ENSGEVG00005012901) #28	CACHD1 (ENSGEVG00005011807) #29	RAVER2 (ENSGEVG00005011582) #30	JAK1 (ENSGEVG00005011508) #32	ENSGEVG00005011475 #33	DNAJC6 (ENSGEVG00005008265) #34	LEPROT (ENSGEVG00005007695) #35	LEPR (ENSGEVG00005007099) #36	ENSGEVG00005006958	ENSGEVG00005006928
Emydidae	ANCESTRAL SPECIES	22	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668.g #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000156746 #20	ENSGT00940000155661 #19	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00950000183297
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	98					ENSTMTG00000021677	ENSTMTG00000021657	ENSTMTG00000021509 #14	ENSTMTG00000021463 #15	ENSTMTG00000021443 #16	ENSTMTG00000021437 #16	ENSTMTG00000021425 #17	ENSTMTG00000021413 #18	ENSTMTG00000021400 #20	ENSTMTG00000017136 #19	ENSTMTG00000016577 #21	ENSTMTG00000016568 #22	ENSTMTG00000016554 #23	ENSTMTG00000016541 #24	ENSTMTG00000016529 #25	ENSTMTG00000016515 #26	ENSTMTG00000016476 #27	ENSTMTG00000016442 #28	ENSTMTG00000016205 #29	ENSTMTG00000016139 #30	ENSTMTG00000016096 #32	ENSTMTG00000016067 #33	ENSTMTG00000013045 #34	ENSTMTG00000012656 #35	ENSTMTG00000011103 #36	ENSTMTG00000010870	ENSTMTG00000010706
Three-toed box turtle	MODERN SPECIES	97						ENSTMTG00000022302	ENSTMTG00000022294	ENSTMTG00000022290 #14	ENSTMTG00000022285 #15	ENSTMTG00000022270 #16	ENSTMTG00000022254 #17	ENSTMTG00000022250 #18	ENSTMTG00000022246 #20	ENSTMTG00000021690 #19	ENSTMTG00000021554 #21	ENSTMTG00000021552 #22	ENSTMTG00000021547 #23	ENSTMTG00000021539 #24	ENSTMTG00000021518 #25	ENSTMTG00000021506 #26	ENSTMTG00000021497 #27	ENSTMTG00000021492 #28	ENSTMTG00000021422 #29	ENSTMTG00000021399 #30	ENSTMTG00000021386 #32	ENSTMTG00000021372 #33	ENSTMTG00000020247 #34	ENSTMTG00000020147 #35	ENSTMTG00000019457 #36	ENSTMTG00000019383	ENSTMTG00000018590
Lepidosauria	ANCESTRAL SPECIES	11	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Episquamata	ANCESTRAL SPECIES	1	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00390000008678 #13	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Common wall lizard	MODERN SPECIES	14	ENSPMRG00000003749	ENSPMRG00000003732	ENSPMRG00000015689	ENSPMRG00000015680	ENSPMRG00000015664	ENSPMRG00000015652	ENSPMRG00000015533	NFIA (ENSPMRG00000015474) #14	TM2D1 (ENSPMRG00000015459) #15	PATJ (ENSPMRG00000015351) #16	KANK4 (ENSPMRG00000015316) #17	USP1 (ENSPMRG00000015310) #18	ANGPTL3 (ENSPMRG00000015301) #20	DOCK7 (ENSPMRG00000011757) #19	ATG4C (ENSPMRG00000011290) #21	FOXD3 (ENSPMRG00000011286) #22	ENSPMRG00000011282	ALG6 (ENSPMRG00000011277) #23	ITGB3BP (ENSPMRG00000011267) #24	EFCAB7 (ENSPMRG00000011260) #25	PGM1 (ENSPMRG00000011249) #26	ENSPMRG00000011246	ROR1 (ENSPMRG00000011243) #27	ENSPMRG00000011232 #28	ENSPMRG00000011227	CACHD1 (ENSPMRG00000011156) #29	ENSPMRG00000011133	RAVER2 (ENSPMRG00000011111) #30	JAK1 (ENSPMRG00000011088) #32	ENSPMRG00000011079 #33	DNAJC6 (ENSPMRG00000011049) #34
Argentine black and white tegu	MODERN SPECIES	31	ENSSMRG00000018045	ENSSMRG00000018047	C1orf87 (ENSSMRG00000018049) #13	ENSSMRG00000018050	ENSSMRG00000018056 #14	ENSSMRG00000018057 #14	ENSSMRG00000018058	TM2D1 (ENSSMRG00000018059) #15	PATJ (ENSSMRG00000018061) #16	ENSSMRG00000018263	KANK4 (ENSSMRG00000018264) #17	USP1 (ENSSMRG00000018265) #18	DOCK7 (ENSSMRG00000018266) #19	ANGPTL3 (ENSSMRG00000018270) #20	ATG4C (ENSSMRG00000018271) #21	FOXD3 (ENSSMRG00000018273) #22	ALG6 (ENSSMRG00000018274) #23	ITGB3BP (ENSSMRG00000018275) #24	EFCAB7 (ENSSMRG00000018276) #25	PGM1 (ENSSMRG00000018277) #26	ROR1 (ENSSMRG00000018278) #27	CACHD1 (ENSSMRG00000018279) #29	RAVER2 (ENSSMRG00000018280) #30	JAK1 (ENSSMRG00000018281) #32	ENSSMRG00000019953 #33	DNAJC6 (ENSSMRG00000019954) #34	LEPROT (ENSSMRG00000019955) #35	LEPR (ENSSMRG00000019956) #36	ENSSMRG00000019957	PDE4B (ENSSMRG00000019958)	SGIP1 (ENSSMRG00000019959)
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182879.b.j	ENSGT00950000182879.b.i	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190
Elapidae	ANCESTRAL SPECIES	1	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136.bb.b #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00390000018600	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185
Indian cobra	MODERN SPECIES	2	MYSM1 (ENSNNAG00000010769) #7	ENSNNAG00000010866	JUN (ENSNNAG00000011183) #8	FGGY (ENSNNAG00000011194) #9	ENSNNAG00000011231	HOOK1 (ENSNNAG00000011247) #10	ENSNNAG00000011318 #14	ENSNNAG00000011408 #14	TM2D1 (ENSNNAG00000011456) #15	PATJ (ENSNNAG00000011539) #16	KANK4 (ENSNNAG00000011718) #17	USP1 (ENSNNAG00000011759) #18	DOCK7 (ENSNNAG00000012070) #19	ANGPTL3 (ENSNNAG00000016124) #20	ATG4C (ENSNNAG00000016146) #21	FOXD3 (ENSNNAG00000016171) #22	ALG6 (ENSNNAG00000016183) #23	ENSNNAG00000016201 #24	PGM1 (ENSNNAG00000016220) #26	ROR1 (ENSNNAG00000016256) #27	CACHD1 (ENSNNAG00000016329) #29	RAVER2 (ENSNNAG00000016550) #30	ENSNNAG00000016582 #32	ENSNNAG00000016668 #32	ENSNNAG00000017585	ENSNNAG00000017594 #33	DNAJC6 (ENSNNAG00000017647) #34	LEPROT (ENSNNAG00000017872) #35	LEPR (ENSNNAG00000017874) #36	ENSNNAG00000017880	PDE4B (ENSNNAG00000017882)
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136.bb.a #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185	ENSGT01030000236550
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00390000018245.d	ENSGT00940000157721 #7	ENSGT00940000165489	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136.bb.a #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000004336 #24	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185	ENSGT01030000236550
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	107								ENSPTXG00000018638 #14	ENSPTXG00000018639 #15	ENSPTXG00000018640 #16	ENSPTXG00000018641 #17	ENSPTXG00000018642 #18	ENSPTXG00000018658 #19	ENSPTXG00000018828 #20	ENSPTXG00000018829 #21	ENSPTXG00000018830 #22	ENSPTXG00000018832 #23	ENSPTXG00000018834 #26	ENSPTXG00000018836 #27	ENSPTXG00000018838 #29	ENSPTXG00000018841 #30	ENSPTXG00000018843 #32	ENSPTXG00000018846 #33	ENSPTXG00000018854 #34	ENSPTXG00000018867 #35	ENSPTXG00000018868 #36	ENSPTXG00000018869
Eastern brown snake	MODERN SPECIES	109								ENSPTXG00000018924 #14	ENSPTXG00000018925 #15	ENSPTXG00000018926 #16	ENSPTXG00000018927 #17	ENSPTXG00000018928 #18	ENSPTXG00000018929 #19	ENSPTXG00000018930 #20	ENSPTXG00000018931 #21	ENSPTXG00000018932 #22	ENSPTXG00000018933 #23	ENSPTXG00000018934	ENSPTXG00000018935 #26	ENSPTXG00000018936 #27	ENSPTXG00000012470 #29	ENSPTXG00000012478 #30	ENSPTXG00000012489 #32	ENSPTXG00000012498 #33	ENSPTXG00000012522 #34	ENSPTXG00000013555 #35	ENSPTXG00000013559 #36	ENSPTXG00000013633
Mainland tiger snake	MODERN SPECIES	13	ENSNSUG00000001566 #9	ENSNSUG00000001575 #9	ENSNSUG00000001582	NFIA (ENSNSUG00000001588) #14	TM2D1 (ENSNSUG00000001608) #15	ENSNSUG00000001619 #16	ENSNSUG00000001645 #16	KANK4 (ENSNSUG00000001661) #17	USP1 (ENSNSUG00000001666) #18	ENSNSUG00000001668 #19	ENSNSUG00000001670 #19	ENSNSUG00000001673 #19	ANGPTL3 (ENSNSUG00000001680) #20	ATG4C (ENSNSUG00000001683) #21	ENSNSUG00000001687	FOXD3 (ENSNSUG00000001688) #22	ALG6 (ENSNSUG00000001690) #23	ITGB3BP (ENSNSUG00000001806) #24	PGM1 (ENSNSUG00000001809) #26	ROR1 (ENSNSUG00000001815) #27	CACHD1 (ENSNSUG00000001826) #29	RAVER2 (ENSNSUG00000001829) #30	JAK1 (ENSNSUG00000001845) #32	ENSNSUG00000003203 #33	DNAJC6 (ENSNSUG00000003207) #34	LEPROT (ENSNSUG00000003416) #35	ENSNSUG00000003427	ENSNSUG00000003428 #36	ENSNSUG00000003430	ENSNSUG00000003431	SGIP1 (ENSNSUG00000003440)
Blue-lipped sea krait	MODERN SPECIES	544																FOXD3 (ENSLLTG00000004946) #22	ALG6 (ENSLLTG00000004921) #23	ITGB3BP (ENSLLTG00000004897) #24	PGM1 (ENSLLTG00000004885) #26
Anura	ANCESTRAL SPECIES	17	ENSGT00940000162061 #8	ENSGT01000000214434.F #9	ENSGT00390000017123.a	ENSGT00940000159251 #10	ENSGT00550000074827	ENSGT00940000171673	ENSGT00940000165098	ENSGT00950000182916.a.b.a.a.a.a #14	ENSGT00940000157668 #15	ENSGT00940000155136 #16	ENSGT00940000158468 #17	ENSGT00910000144243 #18	ENSGT00940000155661 #19	ENSGT00940000156746 #20	ENSGT00530000063000.a.a.a #21	ENSGT00940000161645.b #22	ENSGT00940000153733.B #23	ENSGT00390000015466 #25	ENSGT00940000155542.b #26	ENSGT00940000153947.B #27	ENSGT00940000162256 #28	ENSGT00940000157568 #29	ENSGT00940000158648 #30	ENSGT00940000157092 #32	ENSGT00940000154568 #33	ENSGT00940000158755 #34	ENSGT00390000006503.a #35	ENSGT00730000111209 #36	ENSGT00940000155190	ENSGT00940000156301	ENSGT00940000160185
Leishan spiny toad	MODERN SPECIES	11	SCP2 (ENSLLEG00000030837)	PODN (ENSLLEG00000030852)	ENSLLEG00000030859	SLC1A7 (ENSLLEG00000030863)	ENSLLEG00000030878	CPT2 (ENSLLEG00000014337)	CZIB (ENSLLEG00000014428)	MAGOH (ENSLLEG00000014509)	ENSLLEG00000014584	ENSLLEG00000014606	ENSLLEG00000014759	USP1 (ENSLLEG00000014805) #18	DOCK7 (ENSLLEG00000014902) #19	ANGPTL3 (ENSLLEG00000015522) #20	ATG4C (ENSLLEG00000015620) #21	FOXD3 (ENSLLEG00000015938) #22	ALG6 (ENSLLEG00000015973) #23	EFCAB7 (ENSLLEG00000016546) #25	PGM1 (ENSLLEG00000016726) #26	ROR1 (ENSLLEG00000017315) #27	UBE2U (ENSLLEG00000017423) #28	CACHD1 (ENSLLEG00000017578) #29	ENSLLEG00000018275	RAVER2 (ENSLLEG00000018414) #30	JAK1 (ENSLLEG00000018907) #32	ENSLLEG00000019174	ENSLLEG00000019202 #33	DNAJC6 (ENSLLEG00000019316) #34	LEPR (ENSLLEG00000020168) #36	ENSLLEG00000020368	ENSLLEG00000020419
Frog	MODERN SPECIES	4	jun (ENSXETG00000046489) #8	ENSXETG00000044506	fggy (ENSXETG00000008887) #9	XB5864909 [provisional:rnf170] (ENSXETG00000032865)	hook1 (ENSXETG00000008880) #10	psma4 (ENSXETG00000008877)	frem1l (ENSXETG00000008875)	nfia (ENSXETG00000008871) #14	tm2d1 (ENSXETG00000036959) #15	patj (ENSXETG00000030379) #16	ENSXETG00000037245 #17	angptl3 (ENSXETG00000010849) #20	dock7 (ENSXETG00000010841) #19	atg4c (ENSXETG00000010838) #21	ENSXETG00000042244	foxd3 (ENSXETG00000010836) #22	alg6 (ENSXETG00000010835) #23	efcab7 (ENSXETG00000010833) #25	ror1 (ENSXETG00000034676) #27	ube2u (ENSXETG00000035592) #28	ENSXETG00000041559	cachd1 (ENSXETG00000020410) #29	raver2 (ENSXETG00000020406) #30	jak1 (ENSXETG00000020396) #32	ak4 (ENSXETG00000020392) #33	dnajc6 (ENSXETG00000020390) #34	leprot (ENSXETG00000025603) #35	ENSXETG00000047321	lepr (ENSXETG00000020387) #36	ENSXETG00000048079	pde4b (ENSXETG00000020374)
Coelacanth	MODERN SPECIES	559																FOXD3 (ENSLACG00000015487) #22	ALG6 (ENSLACG00000015231) #23	ENSLACG00000022377	EFCAB7 (ENSLACG00000014919) #25	ENSLACG00000014383	ENSLACG00000014117	KIAA0040 (ENSLACG00000022329)	ENSLACG00000013250	ENSLACG00000012743	COP1 (ENSLACG00000011141)	TNR (ENSLACG00000000489)