Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00390000006620	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Glires	ANCESTRAL SPECIES		ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989.f #22	ENSGT00950000182891.a.a.b.a.b.b.a ##21	ENSGT00940000159989.e ##22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35
Hystricomorpha_a	ANCESTRAL SPECIES	54	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989.f #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Hystricomorpha_b	ANCESTRAL SPECIES	61	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989.f #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Long-tailed chinchilla	MODERN SPECIES	252	ADAR (ENSCLAG00000005402) #7	CHRNB2 (ENSCLAG00000005132) #8	UBE2Q1 (ENSCLAG00000005048) #9	SHE (ENSCLAG00000004987) #10	ENSCLAG00000004750 #11	IL6R (ENSCLAG00000004093) #12	ATP8B2 (ENSCLAG00000003593) #13	AQP10 (ENSCLAG00000004886) #14	ENSCLAG00000004829 #15	UBAP2L (ENSCLAG00000003903) #16	ENSCLAG00000012981 #17	CFAP141 (ENSCLAG00000011799) #18	TPM3 (ENSCLAG00000010440) #19	NUP210L (ENSCLAG00000007281) #20	RPS27 (ENSCLAG00000006809) #21	RAB13 (ENSCLAG00000006603) #22	JTB (ENSCLAG00000009842) #23	CREB3L4 (ENSCLAG00000008566) #24	SLC39A1 (ENSCLAG00000008243) #25	CRTC2 (ENSCLAG00000007860) #26	DENND4B (ENSCLAG00000005313) #27	GATAD2B (ENSCLAG00000004814) #28	SLC27A3 (ENSCLAG00000004445) #29	INTS3 (ENSCLAG00000003620) #30	NPR1 (ENSCLAG00000004130) #31	SNAPIN (ENSCLAG00000003233) #32	ILF2 (ENSCLAG00000003140) #33	CHTOP (ENSCLAG00000002957) #34	S100A1 (ENSCLAG00000002883) #35	S100A13 (ENSCLAG00000002812) #36	S100A14 (ENSCLAG00000006079) #37
Degu	DUPLICATION
Degu	DUPLICATION
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	304				BMP15 (ENSODEG00000000854)	ENSODEG00000000886	ENSODEG00000001005	DGKK (ENSODEG00000001078)	AKAP4 (ENSODEG00000001223)	ENSODEG00000018669	ENSODEG00000001449	CLCN5 (ENSODEG00000001495)	ENSODEG00000001517	USP27X (ENSODEG00000001537)	ENSODEG00000018712	ENSODEG00000018701	ENSODEG00000018700 #22	PPP1R3F (ENSODEG00000001563)	FOXP3 (ENSODEG00000001628)	CCDC22 (ENSODEG00000001642)	ENSODEG00000001692	SYP (ENSODEG00000001808)	PRICKLE3 (ENSODEG00000001845)	PLP2 (ENSODEG00000001003)	MAGIX (ENSODEG00000001017)	ENSODEG00000018621	WDR45 (ENSODEG00000001091)	PRAF2 (ENSODEG00000001165)	CCDC120 (ENSODEG00000001185)
Degu	MODERN SPECIES	61	TMEM178A (ENSODEG00000010204)	MAP4K3 (ENSODEG00000011426)	CDKL4 (ENSODEG00000010265)	SOS1 (ENSODEG00000012567)	ENSODEG00000011783	ARHGEF33 (ENSODEG00000010871)	ENSODEG00000009626	DHX57 (ENSODEG00000011626)	GEMIN6 (ENSODEG00000011245)	SRSF7 (ENSODEG00000010029)	ENSODEG00000011016	GALM (ENSODEG00000009740)	ENSODEG00000009674	ENSODEG00000011052	ENSODEG00000009915	ENSODEG00000011434 #22	ATL2 (ENSODEG00000011141)	CYP1B1 (ENSODEG00000012353)	ENSODEG00000019986	QPCT (ENSODEG00000009887)	ENSODEG00000011270	PRKD3 (ENSODEG00000010640)	ENSODEG00000011006	ENSODEG00000011002	ENSODEG00000010503	SULT6B1 (ENSODEG00000009825)	ENSODEG00000010489	ENSODEG00000019711	GPATCH11 (ENSODEG00000011404)	HEATR5B (ENSODEG00000009045)	STRN (ENSODEG00000009292)
Degu	MODERN SPECIES	111	FBLN5 (ENSODEG00000008614)	SERPINA6 (ENSODEG00000008142)	SERPINA10 (ENSODEG00000008574)	PPP4R4 (ENSODEG00000008810)	ENSODEG00000008703	ENSODEG00000007700	OTUB2 (ENSODEG00000008797)	ASB2 (ENSODEG00000007460)	FAM181A (ENSODEG00000011589)	PRIMA1 (ENSODEG00000011335)	UNC79 (ENSODEG00000007579)	ENSODEG00000008501	ENSODEG00000009446	ENSODEG00000008400	ENSODEG00000010541	ENSODEG00000007889 #22	UBR7 (ENSODEG00000008732)	GON7 (ENSODEG00000008846)	LYSET (ENSODEG00000014062)	ITPK1 (ENSODEG00000007795)	CHGA (ENSODEG00000008252)	GOLGA5 (ENSODEG00000008897)	LGMN (ENSODEG00000009324)	RIN3 (ENSODEG00000010091)	SLC24A4 (ENSODEG00000008367)	CPSF2 (ENSODEG00000008682)	ENSODEG00000019811	ENSODEG00000010647	ENSODEG00000009488	SERPINA1 (ENSODEG00000010255)	SERPINA11 (ENSODEG00000010365)
Degu	MODERN SPECIES	117	EP400 (ENSODEG00000008132)	PUS1 (ENSODEG00000008248)	ULK1 (ENSODEG00000008683)	MMP17 (ENSODEG00000008852)	SFSWAP (ENSODEG00000008020)	ENSODEG00000008349	STX2 (ENSODEG00000009934)	RIMBP2 (ENSODEG00000009979)	PIWIL1 (ENSODEG00000010629)	ENSODEG00000019685	ENSODEG00000008825	SLC15A4 (ENSODEG00000009561)	ENSODEG00000009405	ENSODEG00000009816	ENSODEG00000009713	ENSODEG00000010443 #22	ENSODEG00000019612	AACS (ENSODEG00000008915)	DHX37 (ENSODEG00000009929)	ENSODEG00000019559	NCOR2 (ENSODEG00000009536)	CCDC92 (ENSODEG00000008834)	DNAH10 (ENSODEG00000009996)	ATP6V0A2 (ENSODEG00000009400)	ENSODEG00000010094	ENSODEG00000010222	ENSODEG00000009632	ENSODEG00000010829	RILPL1 (ENSODEG00000010907)	SNRNP35 (ENSODEG00000019870)	ENSODEG00000011545
Degu	MODERN SPECIES	76																ENSODEG00000016804 #22	GJC3 (ENSODEG00000016841)	AZGP1 (ENSODEG00000016741)	ZKSCAN1 (ENSODEG00000016790)	ZSCAN21 (ENSODEG00000017115)	ENSODEG00000020419	ZNF3 (ENSODEG00000016822)	COPS6 (ENSODEG00000016873)	ENSODEG00000017079	ENSODEG00000016551	AP4M1 (ENSODEG00000016717)	TAF6 (ENSODEG00000016755)	CNPY4 (ENSODEG00000016875)	MBLAC1 (ENSODEG00000020533)	ENSODEG00000016612	ENSODEG00000016889
Guinea pig	MODERN SPECIES	10	ADAR (ENSCPOG00000005463) #7	ENSCPOG00000013155 #8	UBE2Q1 (ENSCPOG00000001472) #9	SHE (ENSCPOG00000001163) #10	IL6R (ENSCPOG00000033327) #12	ENSCPOG00000037176	ATP8B2 (ENSCPOG00000014022) #13	AQP10 (ENSCPOG00000039313) #14	HAX1 (ENSCPOG00000007307) #15	ENSCPOG00000021439 #16	C1orf43 (ENSCPOG00000006131) #17	CFAP141 (ENSCPOG00000039253) #18	TPM3 (ENSCPOG00000032186) #19	ENSCPOG00000007264 #20	ENSCPOG00000024660 ##21	RAB13 (ENSCPOG00000011491) #22	JTB (ENSCPOG00000012906) #23	CREB3L4 (ENSCPOG00000034503) #24	SLC39A1 (ENSCPOG00000039162) #25	CRTC2 (ENSCPOG00000012884) #26	DENND4B (ENSCPOG00000012910) #27	GATAD2B (ENSCPOG00000010326) #28	SLC27A3 (ENSCPOG00000009466) #29	INTS3 (ENSCPOG00000009450) #30	NPR1 (ENSCPOG00000025084) #31	ILF2 (ENSCPOG00000005835) #33	SNAPIN (ENSCPOG00000032621) #32	CHTOP (ENSCPOG00000005829) #34	S100A1 (ENSCPOG00000005826) #35	S100A13 (ENSCPOG00000005824) #36	S100A14 (ENSCPOG00000013796) #37
Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989.f #22	ENSGT00950000182891.a.a.b.a.b.b.a ##21	ENSGT00940000159989.e ##22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Hystricomorpha_a	ANCESTRAL SPECIES	131															ENSGT00950000182891.a.a.b.a.b.b.a ##21	ENSGT00940000159989.e ##22
Hystricomorpha_b	ANCESTRAL SPECIES	173															ENSGT00950000182891.a.a.b.a.b.b.a ##21	ENSGT00940000159989.e ##22
Degu	MODERN SPECIES	73	KCNN3 (ENSODEG00000011444)	ADAR (ENSODEG00000011111) #7	CHRNB2 (ENSODEG00000011916) #8	ENSODEG00000020162	UBE2Q1 (ENSODEG00000012607) #9	SHE (ENSODEG00000010544) #10	ATP8B2 (ENSODEG00000010646) #13	ENSODEG00000010731 #15	ENSODEG00000011367 #16	ENSODEG00000012117 #16	ENSODEG00000011467 #17	CFAP141 (ENSODEG00000011475) #18	TPM3 (ENSODEG00000011815) #19	NUP210L (ENSODEG00000011746) #20	ENSODEG00000012394 ##21	ENSODEG00000012634 ##22	JTB (ENSODEG00000012805) #23	CREB3L4 (ENSODEG00000013013) #24	SLC39A1 (ENSODEG00000012305) #25	CRTC2 (ENSODEG00000012430) #26	DENND4B (ENSODEG00000013675) #27	ENSODEG00000019967	GATAD2B (ENSODEG00000012298) #28	SLC27A3 (ENSODEG00000012359) #29	INTS3 (ENSODEG00000012581) #30	NPR1 (ENSODEG00000013147) #31	ENSODEG00000011732 #33	SNAPIN (ENSODEG00000011863) #32	ENSODEG00000011754 #34	S100A1 (ENSODEG00000012345) #35	S100A13 (ENSODEG00000013081) #36
Naked mole-rat female	MODERN SPECIES	10	CHRNB2 (ENSHGLG00000007150) #8	ENSHGLG00000007304 #9	ENSHGLG00000035218 #10	IL6R (ENSHGLG00000032250) #12	ATP8B2 (ENSHGLG00000018554) #13	AQP10 (ENSHGLG00000018126) #14	ENSHGLG00000018499	HAX1 (ENSHGLG00000018827) #15	UBAP2L (ENSHGLG00000009352) #16	ENSHGLG00000043186 #17	CFAP141 (ENSHGLG00000034346) #18	ENSHGLG00000035415 ##19	ENSHGLG00000010502 #19	NUP210L (ENSHGLG00000039681) #20	RPS27 (ENSHGLG00000007748) #21	RAB13 (ENSHGLG00000008749) ##22	JTB (ENSHGLG00000040053) #23	CREB3L4 (ENSHGLG00000033275) #24	SLC39A1 (ENSHGLG00000007034) #25	CRTC2 (ENSHGLG00000008041) #26	DENND4B (ENSHGLG00000006184) #27	ENSHGLG00000015467 #28	ENSHGLG00000034978	ENSHGLG00000038740	ENSHGLG00000046497	PGLYRP4 (ENSHGLG00000008250)	PGLYRP3 (ENSHGLG00000033466)	PRR9 (ENSHGLG00000032412)	ENSHGLG00000020537	ENSHGLG00000012992	ENSHGLG00000044563
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000157062 #25	ENSGT00940000160806 #24	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Marmotini	ANCESTRAL SPECIES	33	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136.j #23	ENSGT00940000160806.b #24	ENSGT00940000160806.a.a #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36
Alpin marmot	MODERN SPECIES	85	ENSMMMG00000017139	ADAR (ENSMMMG00000017145) #7	CHRNB2 (ENSMMMG00000017189) #8	UBE2Q1 (ENSMMMG00000017197) #9	SHE (ENSMMMG00000017208) #10	IL6R (ENSMMMG00000017215) #12	ATP8B2 (ENSMMMG00000017287) #13	AQP10 (ENSMMMG00000017359) #14	HAX1 (ENSMMMG00000017363) #15	UBAP2L (ENSMMMG00000017401) #16	ENSMMMG00000017556 #17	TPM3 (ENSMMMG00000017605) #19	ENSMMMG00000017625 #20	ENSMMMG00000017632 #20	ENSMMMG00000017652 ##21	RAB13 (ENSMMMG00000017661) #22	ENSMMMG00000017675 #23	ENSMMMG00000017685 #24	ENSMMMG00000017690 #24	SLC39A1 (ENSMMMG00000017691) #25	CRTC2 (ENSMMMG00000017698) #26	DENND4B (ENSMMMG00000017709) #27	GATAD2B (ENSMMMG00000017734) #28	SLC27A3 (ENSMMMG00000017745) #29	INTS3 (ENSMMMG00000017913) #30	NPR1 (ENSMMMG00000017990) #31	ILF2 (ENSMMMG00000018010) #33	SNAPIN (ENSMMMG00000018031) #32	CHTOP (ENSMMMG00000018043) #34	S100A1 (ENSMMMG00000018060) #35	ENSMMMG00000018062 #36
Marmotini_b	ANCESTRAL SPECIES	37	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136.j #23	ENSGT00940000160806.a.a #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Squirrel	MODERN SPECIES	180	KCNN3 (ENSSTOG00000026978)	ADAR (ENSSTOG00000014151) #7	CHRNB2 (ENSSTOG00000026442) #8	UBE2Q1 (ENSSTOG00000003400) #9	SHE (ENSSTOG00000009301) #10	IL6R (ENSSTOG00000009285) #12	ATP8B2 (ENSSTOG00000014623) #13	AQP10 (ENSSTOG00000014619) #14	HAX1 (ENSSTOG00000014614) #15	UBAP2L (ENSSTOG00000014589) #16	ENSSTOG00000029834 #17	CFAP141 (ENSSTOG00000014580) #18	ENSSTOG00000023525 ##19	NUP210L (ENSSTOG00000014542) #20	ENSSTOG00000032447 ##21	RAB13 (ENSSTOG00000011222) #22	ENSSTOG00000014348 #23	CREB3L4 (ENSSTOG00000014516) #24	SLC39A1 (ENSSTOG00000001572) #25	CRTC2 (ENSSTOG00000027219) #26	DENND4B (ENSSTOG00000010539) #27	GATAD2B (ENSSTOG00000005407) #28	SLC27A3 (ENSSTOG00000020359) #29	INTS3 (ENSSTOG00000000670) #30	NPR1 (ENSSTOG00000022009) #31	ENSSTOG00000000667 #33	SNAPIN (ENSSTOG00000000661) #32	CHTOP (ENSSTOG00000000660) #34	S100A1 (ENSSTOG00000000658) #35	S100A13 (ENSSTOG00000028822) #36	S100A14 (ENSSTOG00000021896) #37
Arctic ground squirrel	MODERN SPECIES	566									HAX1 (ENSUPAG00010013917) #15	UBAP2L (ENSUPAG00010013962) #16	ENSUPAG00010014744 #17	CFAP141 (ENSUPAG00010014782) #18	TPM3 (ENSUPAG00010014794) #19	NUP210L (ENSUPAG00010014983) #20	RPS27 (ENSUPAG00010015110) #21	RAB13 (ENSUPAG00010015124) #22	JTB (ENSUPAG00010015137) #23	ENSUPAG00010015154 #24	SLC39A1 (ENSUPAG00010015164) #25	CRTC2 (ENSUPAG00010015170) #26	DENND4B (ENSUPAG00010015204) #27	GATAD2B (ENSUPAG00010015294) #28	SLC27A3 (ENSUPAG00010015351) #29	INTS3 (ENSUPAG00010015361) #30	NPR1 (ENSUPAG00010015422) #31	ILF2 (ENSUPAG00010015468) #33	SNAPIN (ENSUPAG00010015493) #32	CHTOP (ENSUPAG00010015512) #34	S100A1 (ENSUPAG00010015614) #35	S100A13 (ENSUPAG00010015623) #36	S100A14 (ENSUPAG00010015642) #37
Eurasian red squirrel	MODERN SPECIES		IL6R (ENSSVLG00005014351) #12	ATP8B2 (ENSSVLG00005014269) #13	AQP10 (ENSSVLG00005014066) #14	ENSSVLG00005013980 #15	UBAP2L (ENSSVLG00005013768) #16	C1orf43 (ENSSVLG00005013372) #17	CFAP141 (ENSSVLG00005013145) #18	ENSSVLG00005012292 ##19	ENSSVLG00005011990 #20	ENSSVLG00005011949	ENSSVLG00005011935	ENSSVLG00005011875	RPS27 (ENSSVLG00005011813) #21	ENSSVLG00005011603 #20	ENSSVLG00005011534 ##21	RAB13 (ENSSVLG00005011364) #22	ENSSVLG00005011332	CREB3L4 (ENSSVLG00005011183) #24	SLC39A1 (ENSSVLG00005011031) #25	CRTC2 (ENSSVLG00005010882) #26	DENND4B (ENSSVLG00005010822) #27	GATAD2B (ENSSVLG00005010763) #28	SLC27A3 (ENSSVLG00005010629) #29	INTS3 (ENSSVLG00005010550) #30	NPR1 (ENSSVLG00005010394) #31	ILF2 (ENSSVLG00005010340) #33	SNAPIN (ENSSVLG00005010310) #32	CHTOP (ENSSVLG00005010223) #34	ENSSVLG00005010187 #35	S100A13 (ENSSVLG00005010166) #36	S100A14 (ENSSVLG00005010151) #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Kangaroo rat	MODERN SPECIES	345	Chrnb2 (ENSDORG00000007810) #8	Ube2q1 (ENSDORG00000007808) #9	She (ENSDORG00000007804) #10	Il6ra (ENSDORG00000014779) #12	Atp8b2 (ENSDORG00000008652) #13	ENSDORG00000008649 #14	ENSDORG00000012587 #15	ENSDORG00000027500 #16	ENSDORG00000027148 #16	4933434E20Rik (ENSDORG00000005454) #17	Cfap141 (ENSDORG00000029641) #18	ENSDORG00000006208 ##19	ENSDORG00000023795 ##21	Nup210l (ENSDORG00000001594) #20	ENSDORG00000001593 ##21	Rab13 (ENSDORG00000001591) #22	Jtb (ENSDORG00000028390) #23	Creb3l4 (ENSDORG00000011769) #24	Slc39a1 (ENSDORG00000027137) #25	Crtc2 (ENSDORG00000011766) #26	Dennd4b (ENSDORG00000011762) #27	ENSDORG00000028146	Gatad2b (ENSDORG00000013431) #28	Slc27a3 (ENSDORG00000001476) #29	Ints3 (ENSDORG00000001484) #30	Npr1 (ENSDORG00000004886) #31	ENSDORG00000007966 #33	Snapin (ENSDORG00000007965) #32	ENSDORG00000008934 #34	S100a1 (ENSDORG00000024144) #35	S100a13 (ENSDORG00000024358) #36
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Muroidea	ANCESTRAL SPECIES	6	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Chinese hamster chok1gshd	MODERN SPECIES	352	Kcnn3 (ENSCGRG00001007060)	Adar (ENSCGRG00001013419) #7	Chrnb2 (ENSCGRG00001000525) #8	Ube2q1 (ENSCGRG00001022706) #9	She (ENSCGRG00001017032) #10	Il6ra (ENSCGRG00001022987) #12	Atp8b2 (ENSCGRG00001011569) #13	ENSCGRG00001005547 #14	ENSCGRG00001023646 #15	ENSCGRG00001012946 #16	4933434E20Rik (ENSCGRG00001018378) #17	Cfap141 (ENSCGRG00001014550) #18	Tpm3 (ENSCGRG00001019752) ##19	Nup210l (ENSCGRG00001002603) #20	ENSCGRG00001000391 #21	Rab13 (ENSCGRG00001021505) #22	Jtb (ENSCGRG00001016269) #23	Creb3l4 (ENSCGRG00001008711) #24	Slc39a1 (ENSCGRG00001011734) #25	Crtc2 (ENSCGRG00001011316) #26	Dennd4b (ENSCGRG00001001735) #27	Gatad2b (ENSCGRG00001023947) #28	Slc27a3 (ENSCGRG00001015294) #29	Ints3 (ENSCGRG00001024236) #30	Npr1 (ENSCGRG00001000326) #31	ENSCGRG00001009622 #33	Snapin (ENSCGRG00001023027) #32	ENSCGRG00001005128 #34	S100a1 (ENSCGRG00001024440) #35	S100a13 (ENSCGRG00001023525) #36	S100a14 (ENSCGRG00001020280) #37
Golden Hamster	MODERN SPECIES	714	Kcnn3 (ENSMAUG00000000673)	Adar (ENSMAUG00000015796) #7	Chrnb2 (ENSMAUG00000021538) #8	Ube2q1 (ENSMAUG00000009758) #9	She (ENSMAUG00000009880) #10	Il6ra (ENSMAUG00000011038) #12	Atp8b2 (ENSMAUG00000001174) #13	Hax1 (ENSMAUG00000009013) #15	ENSMAUG00000022268 #16	ENSMAUG00000003991 #16	4933434E20Rik (ENSMAUG00000001710) #17	Cfap141 (ENSMAUG00000002399) #18	Tpm3 (ENSMAUG00000015501) ##19	Nup210l (ENSMAUG00000020701) #20	ENSMAUG00000017944 #21	Rab13 (ENSMAUG00000015713) #22	Jtb (ENSMAUG00000006012) #23	Slc39a1 (ENSMAUG00000018122) #25	Dennd4b (ENSMAUG00000020876) #27	Gatad2b (ENSMAUG00000021214) #28	Slc27a3 (ENSMAUG00000009254) #29	Ints3 (ENSMAUG00000003190) #30	Npr1 (ENSMAUG00000011600) #31	Ilf2 (ENSMAUG00000013875) #33	Snapin (ENSMAUG00000008480) #32	Chtop (ENSMAUG00000018496) #34	S100a1 (ENSMAUG00000010269) #35	S100a13 (ENSMAUG00000019658) #36	S100a14 (ENSMAUG00000019315) #37	S100a16 (ENSMAUG00000012122)	S100a3 (ENSMAUG00000014283)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000014801	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Prairie vole	MODERN SPECIES	99	Pmvk (ENSMOCG00000019772)	Kcnn3 (ENSMOCG00000000459)	Adar (ENSMOCG00000018547) #7	Chrnb2 (ENSMOCG00000020688) #8	Ube2q1 (ENSMOCG00000007891) #9	She (ENSMOCG00000000437) #10	Il6ra (ENSMOCG00000000552) #12	Atp8b2 (ENSMOCG00000000840) #13	Hax1 (ENSMOCG00000003057) #15	Ubap2l (ENSMOCG00000015398) #16	4933434E20Rik (ENSMOCG00000016695) #17	Cfap141 (ENSMOCG00000002986) #18	Tpm3 (ENSMOCG00000017543) ##19	Nup210l (ENSMOCG00000005456) #20	ENSMOCG00000002329 ##21	Rab13 (ENSMOCG00000021448) #22	Jtb (ENSMOCG00000009598) #23	Creb3l4 (ENSMOCG00000016484) #24	ENSMOCG00000014154 #25	Crtc2 (ENSMOCG00000012139) #26	Dennd4b (ENSMOCG00000016756) #27	Gatad2b (ENSMOCG00000014982) #28	Slc27a3 (ENSMOCG00000018654) #29	Ints3 (ENSMOCG00000013737) #30	Npr1 (ENSMOCG00000003109) #31	Ilf2 (ENSMOCG00000016112) #33	Snapin (ENSMOCG00000022820) #32	Chtop (ENSMOCG00000021472) #34	S100a1 (ENSMOCG00000004155) #35	S100a13 (ENSMOCG00000016705) #36	ENSMOCG00000021623
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000017450	Adar (ENSPEMG00000000814) #7	Chrnb2 (ENSPEMG00000015010) #8	ENSPEMG00000016011 #9	She (ENSPEMG00000026511) #10	Il6ra (ENSPEMG00000012201) #12	Atp8b2 (ENSPEMG00000017200) #13	ENSPEMG00000016049	Hax1 (ENSPEMG00000017453) #15	Ubap2l (ENSPEMG00000007855) #16	4933434E20Rik (ENSPEMG00000000559) #17	Cfap141 (ENSPEMG00000029478) #18	Tpm3 (ENSPEMG00000015470) ##19	Nup210l (ENSPEMG00000012090) #20	ENSPEMG00000017728 #21	Rab13 (ENSPEMG00000017353) #22	Jtb (ENSPEMG00000025697) #23	Creb3l4 (ENSPEMG00000016681) #24	Slc39a1 (ENSPEMG00000027157) #25	Crtc2 (ENSPEMG00000017679) #26	Dennd4b (ENSPEMG00000008335) #27	Gatad2b (ENSPEMG00000013374) #28	ENSPEMG00000003903	Slc27a3 (ENSPEMG00000010037) #29	Ints3 (ENSPEMG00000009736) #30	Npr1 (ENSPEMG00000018127) #31	Ilf2 (ENSPEMG00000017802) #33	Snapin (ENSPEMG00000002565) #32	Chtop (ENSPEMG00000010788) #34	S100a1 (ENSPEMG00000025814) #35	S100a13 (ENSPEMG00000003539) #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Mus	ANCESTRAL SPECIES	7	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.b.a ##21	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000014801	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Steppe mouse	MODERN SPECIES	3110	Kcnn3 (ENSMSIG00000027072)	Adar (ENSMSIG00000027077) #7	ENSMSIG00000027130 #8	ENSMSIG00000027143	Ube2q1 (ENSMSIG00000027148) #9	She (ENSMSIG00000027176) #10	Il6ra (ENSMSIG00000027228) #12	Atp8b2 (ENSMSIG00000027245) #13	Hax1 (ENSMSIG00000027302) #15	Ubap2l (ENSMSIG00000027332) #16	4933434E20Rik (ENSMSIG00000027489) #17	Cfap141 (ENSMSIG00000027585) #18	Tpm3 (ENSMSIG00000027597) ##19	Nup210l (ENSMSIG00000027707) #20	ENSMSIG00000027767 ##21	ENSMSIG00000027788 #22	Jtb (ENSMSIG00000027805) #23	Creb3l4 (ENSMSIG00000027822) #24	ENSMSIG00000027832 #26	Dennd4b (ENSMSIG00000027848) #27	Gatad2b (ENSMSIG00000000207) #28	Slc27a3 (ENSMSIG00000000282) #29	Ints3 (ENSMSIG00000000363) #30	Npr1 (ENSMSIG00000000933) #31	Ilf2 (ENSMSIG00000001090) #33	Snapin (ENSMSIG00000001126) #32	ENSMSIG00000001140 #34	ENSMSIG00000001217 #36	S100a1 (ENSMSIG00000001251) #35	S100a14 (ENSMSIG00000001281) #37	S100a16 (ENSMSIG00000001321)
Mouse	MODERN SPECIES	12	Pmvk (ENSMUSG00000027952)	Kcnn3 (ENSMUSG00000000794)	Adar (ENSMUSG00000027951) #7	Chrnb2 (ENSMUSG00000027950) #8	Ube2q1 (ENSMUSG00000042572) #9	She (ENSMUSG00000046280) #10	Il6ra (ENSMUSG00000027947) #12	Atp8b2 (ENSMUSG00000060671) #13	Hax1 (ENSMUSG00000027944) #15	Ubap2l (ENSMUSG00000042520) #16	4933434E20Rik (ENSMUSG00000027942) #17	Cfap141 (ENSMUSG00000118506) #18	Tpm3 (ENSMUSG00000027940) ##19	Nup210l (ENSMUSG00000027939) #20	Rps27 (ENSMUSG00000090733) ##21	Rab13 (ENSMUSG00000027935) #22	Jtb (ENSMUSG00000027937) #23	Creb3l4 (ENSMUSG00000027938) #24	Slc39a1 (ENSMUSG00000052310) #25	Crtc2 (ENSMUSG00000027936) #26	Dennd4b (ENSMUSG00000042404) #27	Gatad2b (ENSMUSG00000042390) #28	Slc27a3 (ENSMUSG00000027932) #29	Ints3 (ENSMUSG00000027933) #30	Npr1 (ENSMUSG00000027931) #31	Ilf2 (ENSMUSG00000001016) #33	Snapin (ENSMUSG00000001018) #32	Chtop (ENSMUSG00000001017) #34	S100a1 (ENSMUSG00000044080) #35	S100a13 (ENSMUSG00000042312) #36	S100a14 (ENSMUSG00000042306) #37
Ryukyu mouse	MODERN SPECIES	12	Pbxip1 (MGP_CAROLIEiJ_G0025212)	Pmvk (MGP_CAROLIEiJ_G0025213)	Kcnn3 (MGP_CAROLIEiJ_G0025214)	Adar (MGP_CAROLIEiJ_G0025215) #7	MGP_CAROLIEiJ_G0025216 #8	Ube2q1 (MGP_CAROLIEiJ_G0025217) #9	She (MGP_CAROLIEiJ_G0025218) #10	Il6ra (MGP_CAROLIEiJ_G0025219) #12	Atp8b2 (MGP_CAROLIEiJ_G0025220) #13	Hax1 (MGP_CAROLIEiJ_G0025221) #15	Ubap2l (MGP_CAROLIEiJ_G0025222) #16	MGP_CAROLIEiJ_G0025223 #17	Tpm3-rs7 (MGP_CAROLIEiJ_G0025224) #19	Nup210l (MGP_CAROLIEiJ_G0025225) #20	MGP_CAROLIEiJ_G0025226 #21	Rab13 (MGP_CAROLIEiJ_G0025227) #22	Jtb (MGP_CAROLIEiJ_G0025228) #23	Creb3l4 (MGP_CAROLIEiJ_G0025229) #24	Slc39a1 (MGP_CAROLIEiJ_G0025230) #25	Crtc2 (MGP_CAROLIEiJ_G0025231) #26	Dennd4b (MGP_CAROLIEiJ_G0025232) #27	Gatad2b (MGP_CAROLIEiJ_G0025233) #28	Slc27a3 (MGP_CAROLIEiJ_G0025234) #29	Ints3 (MGP_CAROLIEiJ_G0025235) #30	Npr1 (MGP_CAROLIEiJ_G0025236) #31	Ilf2 (MGP_CAROLIEiJ_G0025237) #33	Snapin (MGP_CAROLIEiJ_G0025238) #32	MGP_CAROLIEiJ_G0025239 #34	S100a1 (MGP_CAROLIEiJ_G0025240) #35	MGP_CAROLIEiJ_G0025241 #36	S100a14 (MGP_CAROLIEiJ_G0025242) #37
Shrew mouse	MODERN SPECIES	17	Pbxip1 (MGP_PahariEiJ_G0026656)	Pmvk (MGP_PahariEiJ_G0026657)	Kcnn3 (MGP_PahariEiJ_G0026658)	Adar (MGP_PahariEiJ_G0026659) #7	MGP_PahariEiJ_G0026660 #8	Ube2q1 (MGP_PahariEiJ_G0026661) #9	She (MGP_PahariEiJ_G0026662) #10	Il6ra (MGP_PahariEiJ_G0026663) #12	Atp8b2 (MGP_PahariEiJ_G0026664) #13	MGP_PahariEiJ_G0026665 #15	Ubap2l (MGP_PahariEiJ_G0026666) #16	MGP_PahariEiJ_G0026667 #17	MGP_PahariEiJ_G0026668 #19	Nup210l (MGP_PahariEiJ_G0026669) #20	MGP_PahariEiJ_G0026670 #21	Rab13 (MGP_PahariEiJ_G0026671) #22	Jtb (MGP_PahariEiJ_G0026672) #23	Creb3l4 (MGP_PahariEiJ_G0026673) #24	Slc39a1 (MGP_PahariEiJ_G0026674) #25	Crtc2 (MGP_PahariEiJ_G0026675) #26	Dennd4b (MGP_PahariEiJ_G0026676) #27	Gatad2b (MGP_PahariEiJ_G0026677) #28	Slc27a3 (MGP_PahariEiJ_G0026678) #29	Ints3 (MGP_PahariEiJ_G0026679) #30	MGP_PahariEiJ_G0026680	Ilf2 (MGP_PahariEiJ_G0026681) #33	Snapin (MGP_PahariEiJ_G0026682) #32	Chtop (MGP_PahariEiJ_G0026683) #34	S100a1 (MGP_PahariEiJ_G0026684) #35	MGP_PahariEiJ_G0026685 #36	S100a14 (MGP_PahariEiJ_G0026686) #37
Rat	MODERN SPECIES	11	Kcnn3 (ENSRNOG00000020706)	Adar (ENSRNOG00000020744) #7	Chrnb2 (ENSRNOG00000020778) #8	Ube2q1 (ENSRNOG00000020791) #9	She (ENSRNOG00000020797) #10	Il6r (ENSRNOG00000020811) #12	Atp8b2 (ENSRNOG00000020822) #13	Aqp10 (ENSRNOG00000069352) #14	Hax1 (ENSRNOG00000045647) #15	Ubap2l (ENSRNOG00000017990) #16	Ns5atp4 (ENSRNOG00000017758) #17	Cfap141 (ENSRNOG00000037406) #18	Tpm3 (ENSRNOG00000017441) #19	Nup210l (ENSRNOG00000055790) #20	Rps27 (ENSRNOG00000016961) #21	Rab13 (ENSRNOG00000016733) #22	Jtb (ENSRNOG00000016379) #23	Creb3l4 (ENSRNOG00000023493) #24	Slc39a1 (ENSRNOG00000059463) #25	Dennd4b (ENSRNOG00000022373) #27	Crtc2 (ENSRNOG00000056337) #26	Gatad2b (ENSRNOG00000015553) #28	Slc27a3 (ENSRNOG00000015421) #29	Ints3 (ENSRNOG00000015153) #30	ENSRNOG00000063260	Npr1 (ENSRNOG00000014684) #31	Ilf2 (ENSRNOG00000014154) #33	Snapin (ENSRNOG00000013356) #32	Chtop (ENSRNOG00000012760) #34	S100a1 (ENSRNOG00000012410) #35	S100a14 (ENSRNOG00000069413) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	497	Pmvk (ENSNGAG00000009702)	Kcnn3 (ENSNGAG00000012664)	Adar (ENSNGAG00000016696) #7	Chrnb2 (ENSNGAG00000007991) #8	Ube2q1 (ENSNGAG00000010765) #9	She (ENSNGAG00000011383) #10	Il6ra (ENSNGAG00000013306) #12	Atp8b2 (ENSNGAG00000016615) #13	Hax1 (ENSNGAG00000000939) #15	ENSNGAG00000022133 #16	4933434E20Rik (ENSNGAG00000023898) #17	Cfap141 (ENSNGAG00000006314) #18	Tpm3 (ENSNGAG00000022391) ##19	Nup210l (ENSNGAG00000005884) #20	Rps27 (ENSNGAG00000005823) ##21	Rab13 (ENSNGAG00000010309) #22	ENSNGAG00000011293 #23	Creb3l4 (ENSNGAG00000013822) #24	ENSNGAG00000017607 #25	Crtc2 (ENSNGAG00000018956) #26	Dennd4b (ENSNGAG00000021805) #27	Gatad2b (ENSNGAG00000020296) #28	Slc27a3 (ENSNGAG00000021835) #29	Ints3 (ENSNGAG00000023917) #30	Npr1 (ENSNGAG00000011425) #31	Ilf2 (ENSNGAG00000012145) #33	Snapin (ENSNGAG00000021152) #32	Chtop (ENSNGAG00000021511) #34	S100a1 (ENSNGAG00000011073) #35	S100a13 (ENSNGAG00000013858) #36	S100a14 (ENSNGAG00000014868) #37
Lesser Egyptian jerboa	MODERN SPECIES	141	Kcnn3 (ENSJJAG00000007766)	Adar (ENSJJAG00000022056) #7	Chrnb2 (ENSJJAG00000020105) #8	Ube2q1 (ENSJJAG00000011804) #9	She (ENSJJAG00000009909) #10	ENSJJAG00000023975 #13	ENSJJAG00000023267 #13	ENSJJAG00000023866 #14	Hax1 (ENSJJAG00000020120) #15	Ubap2l (ENSJJAG00000021524) #16	4933434E20Rik (ENSJJAG00000004208) #17	Cfap141 (ENSJJAG00000015562) #18	Tpm3 (ENSJJAG00000017959) ##19	Nup210l (ENSJJAG00000010321) #20	ENSJJAG00000019594 ##21	Rab13 (ENSJJAG00000010575) #22	Jtb (ENSJJAG00000002705) #23	Creb3l4 (ENSJJAG00000010946) #24	Slc39a1 (ENSJJAG00000022954) #25	Crtc2 (ENSJJAG00000009825) #26	Dennd4b (ENSJJAG00000002150) #27	Gatad2b (ENSJJAG00000024336) #28	Slc27a3 (ENSJJAG00000024298) #29	Ints3 (ENSJJAG00000019885) #30	Npr1 (ENSJJAG00000021087) #31	ENSJJAG00000023269 #33	Snapin (ENSJJAG00000011191) #32	Chtop (ENSJJAG00000013126) #34	S100a1 (ENSJJAG00000016863) #35	S100a14 (ENSJJAG00000022942) #37	S100a16 (ENSJJAG00000016978)
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a	ENSGT00940000157243 #7	ENSGT00940000158417.b #8	ENSGT00940000160166 #9	ENSGT00940000159107 #10	ENSGT00940000161919 #12	ENSGT00940000160804 #13	ENSGT00940000162648 #14	ENSGT00390000018324 #15	ENSGT00390000003453.b.b #16	ENSGT00510000047366 #17	ENSGT00510000048901 #18	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #33	ENSGT00390000008274 #32	ENSGT00390000002869 #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Rabbit	MODERN SPECIES	4	ADAR (ENSOCUG00000008544) #7	UBE2Q1 (ENSOCUG00000003709) #9	SHE (ENSOCUG00000016365) #10	IL6R (ENSOCUG00000016354) #12	ENSOCUG00000016320 #13	ENSOCUG00000032271 #13	AQP10 (ENSOCUG00000029059) #14	ENSOCUG00000032263 #15	UBAP2L (ENSOCUG00000023943) #16	C1orf43 (ENSOCUG00000011821) #17	NUP210L (ENSOCUG00000011794) #20	ENSOCUG00000022459	ENSOCUG00000005113	ENSOCUG00000030717	ENSOCUG00000011792 ##21	RAB13 (ENSOCUG00000006286) #22	ENSOCUG00000011788 #23	CREB3L4 (ENSOCUG00000011784) #24	SLC39A1 (ENSOCUG00000003045) #25	CRTC2 (ENSOCUG00000015733) #26	ENSOCUG00000033615 #26	DENND4B (ENSOCUG00000011771) #27	GATAD2B (ENSOCUG00000008135) #28	SLC27A3 (ENSOCUG00000005457) #29	INTS3 (ENSOCUG00000005436) #30	ENSOCUG00000023068	NPR1 (ENSOCUG00000027588) #31	ILF2 (ENSOCUG00000005430) #33	SNAPIN (ENSOCUG00000005425) #32	ENSOCUG00000002756 #34	S100A1 (ENSOCUG00000002752) #35
Tree shrew	MODERN SPECIES	5090										HAX1 (ENSTBEG00000014445) #15	UBAP2L (ENSTBEG00000014009) #16	C1orf43 (ENSTBEG00000013866) #17	CFAP141 (ENSTBEG00000013818) #18	ENSTBEG00000013764 #19	NUP210L (ENSTBEG00000012857) #20	RAB13 (ENSTBEG00000012734) #22	JTB (ENSTBEG00000012646) #23	CREB3L4 (ENSTBEG00000012480) #24	SLC39A1 (ENSTBEG00000012409) #25	CRTC2 (ENSTBEG00000012222) #26	DENND4B (ENSTBEG00000011792) #27