Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182904.a.a.a #9	ENSGT00940000157243 #10	ENSGT00940000158417.b #11	ENSGT00940000160166 #12	ENSGT00940000159107 #13	ENSGT00940000161919 #14	ENSGT00940000160804 #15	ENSGT00390000018324 #16	ENSGT00390000003453.b.b #17	ENSGT00510000047366 #18	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT01030000234542.b.a.a.a.b.b #19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.a.y #21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #32	ENSGT00390000008274 #33	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Ryukyu mouse	MODERN SPECIES	12	Pbxip1 (MGP_CAROLIEiJ_G0025212) #7	Pmvk (MGP_CAROLIEiJ_G0025213) #8	Kcnn3 (MGP_CAROLIEiJ_G0025214) #9	Adar (MGP_CAROLIEiJ_G0025215) #10	MGP_CAROLIEiJ_G0025216 #11	Ube2q1 (MGP_CAROLIEiJ_G0025217) #12	She (MGP_CAROLIEiJ_G0025218) #13	Il6ra (MGP_CAROLIEiJ_G0025219) #14	Atp8b2 (MGP_CAROLIEiJ_G0025220) #15	Hax1 (MGP_CAROLIEiJ_G0025221) #16	Ubap2l (MGP_CAROLIEiJ_G0025222) #17	MGP_CAROLIEiJ_G0025223 #18	Tpm3-rs7 (MGP_CAROLIEiJ_G0025224) #19	Nup210l (MGP_CAROLIEiJ_G0025225) #20	MGP_CAROLIEiJ_G0025226 #21	Rab13 (MGP_CAROLIEiJ_G0025227) #22	Jtb (MGP_CAROLIEiJ_G0025228) #23	Creb3l4 (MGP_CAROLIEiJ_G0025229) #24	Slc39a1 (MGP_CAROLIEiJ_G0025230) #25	Crtc2 (MGP_CAROLIEiJ_G0025231) #26	Dennd4b (MGP_CAROLIEiJ_G0025232) #27	Gatad2b (MGP_CAROLIEiJ_G0025233) #28	Slc27a3 (MGP_CAROLIEiJ_G0025234) #29	Ints3 (MGP_CAROLIEiJ_G0025235) #30	Npr1 (MGP_CAROLIEiJ_G0025236) #31	Ilf2 (MGP_CAROLIEiJ_G0025237) #32	Snapin (MGP_CAROLIEiJ_G0025238) #33	MGP_CAROLIEiJ_G0025239 #34	S100a1 (MGP_CAROLIEiJ_G0025240) #35	MGP_CAROLIEiJ_G0025241 #36	S100a14 (MGP_CAROLIEiJ_G0025242) #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182904.a.a.a #9	ENSGT00940000157243 #10	ENSGT00940000158417.b #11	ENSGT00940000160166 #12	ENSGT00940000159107 #13	ENSGT00940000161919 #14	ENSGT00940000160804 #15	ENSGT00390000018324 #16	ENSGT00390000003453.b.b #17	ENSGT00510000047366 #18	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.b.a ##21	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #32	ENSGT00390000008274 #33	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000014801 #8	ENSGT00950000182904.a.a.a #9	ENSGT00940000157243 #10	ENSGT00940000158417.b #11	ENSGT00940000160166 #12	ENSGT00940000159107 #13	ENSGT00940000161919 #14	ENSGT00940000160804 #15	ENSGT00390000018324 #16	ENSGT00390000003453.b.b #17	ENSGT00510000047366 #18	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l ##19	ENSGT00390000009491.c #20	ENSGT00950000182891.a.a.b.a.b.b.b ##21	ENSGT00940000159989 #22	ENSGT00390000016136 #23	ENSGT00940000160806 #24	ENSGT00940000157062 #25	ENSGT00390000010652.B #26	ENSGT00940000160472 #27	ENSGT00390000004097.b #28	ENSGT00940000161073 #29	ENSGT00390000014184 #30	ENSGT00940000156223 #31	ENSGT00940000154879 #32	ENSGT00390000008274 #33	ENSGT00390000002869.c.b #34	ENSGT00940000160475 #35	ENSGT00940000161854 #36	ENSGT00940000161706 #37
Steppe mouse	MODERN SPECIES	3110	Kcnn3 (ENSMSIG00000027072) #9	Adar (ENSMSIG00000027077) #10	ENSMSIG00000027130 #11	ENSMSIG00000027143	Ube2q1 (ENSMSIG00000027148) #12	She (ENSMSIG00000027176) #13	Il6ra (ENSMSIG00000027228) #14	Atp8b2 (ENSMSIG00000027245) #15	Hax1 (ENSMSIG00000027302) #16	Ubap2l (ENSMSIG00000027332) #17	4933434E20Rik (ENSMSIG00000027489) #18	Cfap141 (ENSMSIG00000027585)	Tpm3 (ENSMSIG00000027597) ##19	Nup210l (ENSMSIG00000027707) #20	ENSMSIG00000027767 ##21	ENSMSIG00000027788 #22	Jtb (ENSMSIG00000027805) #23	Creb3l4 (ENSMSIG00000027822) #24	ENSMSIG00000027832 #26	Dennd4b (ENSMSIG00000027848) #27	Gatad2b (ENSMSIG00000000207) #28	Slc27a3 (ENSMSIG00000000282) #29	Ints3 (ENSMSIG00000000363) #30	Npr1 (ENSMSIG00000000933) #31	Ilf2 (ENSMSIG00000001090) #32	Snapin (ENSMSIG00000001126) #33	ENSMSIG00000001140 #34	ENSMSIG00000001217 #36	S100a1 (ENSMSIG00000001251) #35	S100a14 (ENSMSIG00000001281) #37	S100a16 (ENSMSIG00000001321)
Mouse	MODERN SPECIES	12	Pmvk (ENSMUSG00000027952) #8	Kcnn3 (ENSMUSG00000000794) #9	Adar (ENSMUSG00000027951) #10	Chrnb2 (ENSMUSG00000027950) #11	Ube2q1 (ENSMUSG00000042572) #12	She (ENSMUSG00000046280) #13	Il6ra (ENSMUSG00000027947) #14	Atp8b2 (ENSMUSG00000060671) #15	Hax1 (ENSMUSG00000027944) #16	Ubap2l (ENSMUSG00000042520) #17	4933434E20Rik (ENSMUSG00000027942) #18	Cfap141 (ENSMUSG00000118506)	Tpm3 (ENSMUSG00000027940) ##19	Nup210l (ENSMUSG00000027939) #20	Rps27 (ENSMUSG00000090733) ##21	Rab13 (ENSMUSG00000027935) #22	Jtb (ENSMUSG00000027937) #23	Creb3l4 (ENSMUSG00000027938) #24	Slc39a1 (ENSMUSG00000052310) #25	Crtc2 (ENSMUSG00000027936) #26	Dennd4b (ENSMUSG00000042404) #27	Gatad2b (ENSMUSG00000042390) #28	Slc27a3 (ENSMUSG00000027932) #29	Ints3 (ENSMUSG00000027933) #30	Npr1 (ENSMUSG00000027931) #31	Ilf2 (ENSMUSG00000001016) #32	Snapin (ENSMUSG00000001018) #33	Chtop (ENSMUSG00000001017) #34	S100a1 (ENSMUSG00000044080) #35	S100a13 (ENSMUSG00000042312) #36	S100a14 (ENSMUSG00000042306) #37